Query 011291
Match_columns 489
No_of_seqs 411 out of 2593
Neff 10.5
Searched_HMMs 46136
Date Thu Mar 28 23:43:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011291.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011291hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 1.7E-33 3.7E-38 264.8 24.4 287 98-474 8-294 (294)
2 KOG4178 Soluble epoxide hydrol 100.0 2.3E-32 5E-37 243.2 21.1 298 96-474 20-320 (322)
3 PRK00870 haloalkane dehalogena 100.0 3.8E-32 8.2E-37 256.4 20.7 270 99-474 20-301 (302)
4 PLN02679 hydrolase, alpha/beta 100.0 3E-31 6.6E-36 255.1 25.5 288 100-474 63-357 (360)
5 PRK03592 haloalkane dehalogena 100.0 2E-31 4.3E-36 250.9 21.9 122 98-259 7-128 (295)
6 TIGR02240 PHA_depoly_arom poly 100.0 4.8E-31 1E-35 245.7 20.9 265 101-477 5-269 (276)
7 PLN02578 hydrolase 100.0 1.1E-29 2.3E-34 244.2 28.4 284 99-472 67-353 (354)
8 PLN03087 BODYGUARD 1 domain co 100.0 2.4E-29 5.2E-34 244.6 24.9 293 101-473 179-478 (481)
9 TIGR03056 bchO_mg_che_rel puta 100.0 9.7E-30 2.1E-34 237.7 21.0 273 98-472 6-278 (278)
10 PLN02385 hydrolase; alpha/beta 100.0 1.6E-29 3.4E-34 243.1 22.8 272 99-476 63-347 (349)
11 PRK06489 hypothetical protein; 100.0 4E-29 8.7E-34 240.9 25.2 292 104-475 46-358 (360)
12 PRK03204 haloalkane dehalogena 100.0 2.4E-29 5.3E-34 234.6 22.7 123 97-258 13-135 (286)
13 PLN03084 alpha/beta hydrolase 100.0 3.8E-29 8.3E-34 238.9 23.6 273 100-472 107-382 (383)
14 PLN02965 Probable pheophorbida 100.0 1.4E-29 2.9E-34 232.9 19.2 247 143-474 5-253 (255)
15 TIGR03343 biphenyl_bphD 2-hydr 100.0 6.5E-29 1.4E-33 232.5 23.4 249 140-472 29-281 (282)
16 TIGR03611 RutD pyrimidine util 100.0 4.8E-29 1E-33 229.9 22.3 245 140-472 12-256 (257)
17 PRK10673 acyl-CoA esterase; Pr 100.0 7.3E-29 1.6E-33 228.6 21.8 241 139-473 14-254 (255)
18 PRK10349 carboxylesterase BioH 100.0 7.8E-29 1.7E-33 228.4 20.3 242 142-473 14-255 (256)
19 PRK07581 hypothetical protein; 100.0 1.3E-28 2.7E-33 236.2 21.7 299 104-476 22-338 (339)
20 PHA02857 monoglyceride lipase; 100.0 3.5E-28 7.7E-33 226.6 23.2 261 101-474 4-273 (276)
21 PRK10749 lysophospholipase L2; 100.0 2.2E-28 4.7E-33 232.9 19.7 133 97-259 30-166 (330)
22 KOG1454 Predicted hydrolase/ac 100.0 1.6E-28 3.5E-33 229.3 16.8 266 139-475 56-325 (326)
23 TIGR02427 protocat_pcaD 3-oxoa 100.0 3E-27 6.4E-32 216.9 23.9 240 140-472 12-251 (251)
24 PLN02298 hydrolase, alpha/beta 100.0 4.4E-28 9.6E-33 231.6 18.3 276 99-479 34-322 (330)
25 TIGR01250 pro_imino_pep_2 prol 100.0 2.2E-27 4.8E-32 222.6 22.7 281 102-472 6-288 (288)
26 PRK08775 homoserine O-acetyltr 100.0 1.7E-27 3.7E-32 228.2 22.2 120 100-259 38-173 (343)
27 KOG4409 Predicted hydrolase/ac 100.0 1.5E-27 3.3E-32 212.8 20.0 268 139-473 88-363 (365)
28 TIGR01392 homoserO_Ac_trn homo 100.0 3E-27 6.4E-32 227.3 22.0 134 104-259 12-162 (351)
29 PLN02652 hydrolase; alpha/beta 100.0 1.2E-27 2.7E-32 230.0 19.2 264 104-477 117-390 (395)
30 PF12697 Abhydrolase_6: Alpha/ 100.0 6.1E-27 1.3E-31 211.2 20.0 228 144-466 1-228 (228)
31 TIGR01738 bioH putative pimelo 100.0 2E-27 4.4E-32 217.2 16.9 241 142-471 5-245 (245)
32 PRK11126 2-succinyl-6-hydroxy- 100.0 7.5E-27 1.6E-31 213.4 19.8 99 141-258 2-101 (242)
33 PRK00175 metX homoserine O-ace 100.0 9.6E-27 2.1E-31 225.3 21.4 136 104-259 29-182 (379)
34 PLN02894 hydrolase, alpha/beta 99.9 3.8E-26 8.1E-31 221.9 23.0 110 139-260 103-212 (402)
35 PRK14875 acetoin dehydrogenase 99.9 2.4E-26 5.1E-31 224.0 21.2 261 99-473 110-370 (371)
36 TIGR01249 pro_imino_pep_1 prol 99.9 2E-25 4.3E-30 210.7 24.8 123 101-259 7-130 (306)
37 PLN02211 methyl indole-3-aceta 99.9 1E-25 2.2E-30 208.2 20.6 106 139-259 16-122 (273)
38 COG2267 PldB Lysophospholipase 99.9 2.5E-25 5.4E-30 206.0 20.6 273 97-477 9-297 (298)
39 TIGR03695 menH_SHCHC 2-succiny 99.9 5.1E-26 1.1E-30 208.4 15.7 249 142-472 2-251 (251)
40 KOG1455 Lysophospholipase [Lip 99.9 2.8E-25 6E-30 194.7 17.5 269 99-474 29-312 (313)
41 PRK06765 homoserine O-acetyltr 99.9 1.3E-24 2.9E-29 208.1 23.5 314 105-473 38-387 (389)
42 KOG2984 Predicted hydrolase [G 99.9 1.4E-25 3E-30 182.7 14.2 255 98-474 21-276 (277)
43 PRK05855 short chain dehydroge 99.9 3.1E-24 6.8E-29 221.9 22.8 121 100-256 5-128 (582)
44 PLN02980 2-oxoglutarate decarb 99.9 4.6E-24 1E-28 237.7 23.8 261 140-477 1370-1642(1655)
45 PLN02511 hydrolase 99.9 1E-24 2.2E-29 211.0 15.9 255 140-477 99-368 (388)
46 COG1647 Esterase/lipase [Gener 99.9 5E-24 1.1E-28 177.4 16.1 221 142-473 16-243 (243)
47 KOG2382 Predicted alpha/beta h 99.9 9.7E-24 2.1E-28 188.5 14.9 251 139-474 50-313 (315)
48 TIGR01607 PST-A Plasmodium sub 99.9 1.1E-22 2.4E-27 193.0 18.8 125 103-259 3-185 (332)
49 PRK10985 putative hydrolase; P 99.9 3.6E-22 7.8E-27 189.6 20.9 256 140-475 57-321 (324)
50 PRK05077 frsA fermentation/res 99.9 3.7E-22 8E-27 193.9 20.3 232 106-475 177-413 (414)
51 PRK13604 luxD acyl transferase 99.9 4.3E-22 9.2E-27 180.5 18.7 126 100-259 12-141 (307)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 9.7E-22 2.1E-26 181.9 20.5 118 104-259 8-134 (274)
53 PLN02872 triacylglycerol lipas 99.9 8E-21 1.7E-25 182.1 24.5 144 95-260 42-198 (395)
54 PF00561 Abhydrolase_1: alpha/ 99.9 3.4E-21 7.4E-26 174.4 19.0 228 170-468 1-229 (230)
55 COG2021 MET2 Homoserine acetyl 99.9 6.9E-20 1.5E-24 166.1 22.2 298 105-473 33-367 (368)
56 TIGR01838 PHA_synth_I poly(R)- 99.8 2.7E-20 5.8E-25 183.1 17.4 107 140-260 187-303 (532)
57 TIGR01836 PHA_synth_III_C poly 99.8 9.4E-20 2E-24 175.1 20.7 103 140-261 61-173 (350)
58 PRK10566 esterase; Provisional 99.8 5.6E-20 1.2E-24 168.6 17.2 97 140-247 26-130 (249)
59 KOG2564 Predicted acetyltransf 99.8 1.9E-20 4.1E-25 161.0 12.1 105 139-258 72-181 (343)
60 PRK11071 esterase YqiA; Provis 99.8 2.1E-19 4.5E-24 156.0 14.5 89 142-259 2-93 (190)
61 COG1506 DAP2 Dipeptidyl aminop 99.8 2.1E-19 4.6E-24 183.9 16.1 246 95-477 362-619 (620)
62 PF12695 Abhydrolase_5: Alpha/ 99.8 2E-19 4.4E-24 150.3 9.4 93 143-257 1-93 (145)
63 KOG1552 Predicted alpha/beta h 99.8 1.8E-18 3.8E-23 149.2 14.8 195 140-477 59-255 (258)
64 PRK07868 acyl-CoA synthetase; 99.8 2.6E-18 5.6E-23 186.0 18.2 104 140-260 66-178 (994)
65 KOG4391 Predicted alpha/beta h 99.8 4E-18 8.6E-23 141.1 11.7 219 101-476 58-284 (300)
66 COG0596 MhpC Predicted hydrola 99.8 1.2E-16 2.7E-21 147.3 21.4 103 141-260 21-124 (282)
67 PRK11460 putative hydrolase; P 99.8 1.9E-17 4.1E-22 148.8 14.5 113 140-257 15-136 (232)
68 PF00326 Peptidase_S9: Prolyl 99.7 1.1E-17 2.4E-22 149.3 11.5 201 157-477 3-212 (213)
69 PLN02442 S-formylglutathione h 99.7 2.3E-16 4.9E-21 146.3 17.7 138 105-259 27-178 (283)
70 COG0429 Predicted hydrolase of 99.7 1.1E-16 2.4E-21 142.9 14.8 72 405-476 265-342 (345)
71 PF06342 DUF1057: Alpha/beta h 99.7 1.2E-15 2.5E-20 133.6 20.8 104 142-262 36-140 (297)
72 TIGR02821 fghA_ester_D S-formy 99.7 6.6E-16 1.4E-20 143.1 18.8 139 105-259 22-173 (275)
73 KOG4667 Predicted esterase [Li 99.7 2.5E-16 5.5E-21 130.5 13.9 104 139-259 31-139 (269)
74 TIGR03101 hydr2_PEP hydrolase, 99.7 7.1E-17 1.5E-21 146.1 11.2 104 141-260 25-135 (266)
75 PLN00021 chlorophyllase 99.7 1.3E-15 2.8E-20 141.9 15.0 105 138-258 49-165 (313)
76 PF01738 DLH: Dienelactone hyd 99.7 6.8E-16 1.5E-20 138.2 12.2 186 139-475 12-218 (218)
77 PF03096 Ndr: Ndr family; Int 99.7 6.1E-15 1.3E-19 131.1 17.8 266 103-474 4-279 (283)
78 KOG1838 Alpha/beta hydrolase [ 99.6 1.6E-14 3.4E-19 134.2 18.3 116 104-247 100-221 (409)
79 COG3208 GrsT Predicted thioest 99.6 6.3E-15 1.4E-19 126.6 14.3 226 139-473 5-235 (244)
80 KOG2931 Differentiation-relate 99.6 6.2E-14 1.4E-18 122.4 20.6 271 100-474 24-306 (326)
81 PF05448 AXE1: Acetyl xylan es 99.6 2.6E-14 5.6E-19 133.3 19.5 246 100-474 59-320 (320)
82 COG2945 Predicted hydrolase of 99.6 1.4E-14 2.9E-19 118.7 14.0 61 410-472 145-205 (210)
83 PF06500 DUF1100: Alpha/beta h 99.6 1.5E-14 3.3E-19 135.5 14.8 123 103-259 170-296 (411)
84 COG0412 Dienelactone hydrolase 99.6 5.3E-14 1.1E-18 125.8 17.3 206 104-476 8-235 (236)
85 TIGR01840 esterase_phb esteras 99.6 2.2E-14 4.7E-19 127.6 13.9 115 139-259 11-130 (212)
86 COG3458 Acetyl esterase (deace 99.6 1E-13 2.2E-18 119.5 15.9 140 100-259 59-210 (321)
87 PRK10162 acetyl esterase; Prov 99.6 2.2E-13 4.9E-18 128.6 19.4 102 140-259 80-195 (318)
88 PRK10115 protease 2; Provision 99.6 4.4E-14 9.6E-19 145.8 15.3 136 100-260 419-560 (686)
89 KOG2565 Predicted hydrolases o 99.5 3.9E-13 8.5E-18 120.8 17.5 131 102-261 128-266 (469)
90 PF02230 Abhydrolase_2: Phosph 99.5 2.7E-14 6E-19 127.3 8.7 112 139-259 12-140 (216)
91 TIGR00976 /NonD putative hydro 99.5 2.8E-13 6E-18 137.8 15.7 120 105-259 4-132 (550)
92 TIGR01839 PHA_synth_II poly(R) 99.5 1.7E-12 3.8E-17 126.6 19.7 103 140-261 214-330 (560)
93 KOG2624 Triglyceride lipase-ch 99.5 2E-12 4.3E-17 122.4 18.1 146 96-261 47-201 (403)
94 TIGR01849 PHB_depoly_PhaZ poly 99.5 1.1E-12 2.3E-17 124.5 16.3 103 142-262 103-211 (406)
95 COG0400 Predicted esterase [Ge 99.5 1.1E-12 2.4E-17 113.3 14.5 111 139-260 16-135 (207)
96 TIGR03230 lipo_lipase lipoprot 99.4 3.2E-13 6.9E-18 129.5 9.1 106 140-260 40-155 (442)
97 PF10230 DUF2305: Uncharacteri 99.4 1.9E-11 4.1E-16 111.7 19.5 110 142-260 3-123 (266)
98 COG3571 Predicted hydrolase of 99.4 9E-12 1.9E-16 98.6 14.7 110 143-262 16-127 (213)
99 PF12146 Hydrolase_4: Putative 99.4 7.4E-13 1.6E-17 95.9 7.5 79 107-219 1-79 (79)
100 COG4757 Predicted alpha/beta h 99.4 3.3E-12 7.2E-17 107.6 12.1 115 104-253 12-132 (281)
101 PF06821 Ser_hydrolase: Serine 99.4 8.6E-13 1.9E-17 111.5 8.3 89 144-259 1-91 (171)
102 PF05728 UPF0227: Uncharacteri 99.4 9.2E-12 2E-16 106.3 14.5 88 144-261 2-93 (187)
103 PF02273 Acyl_transf_2: Acyl t 99.4 1.1E-11 2.4E-16 105.6 13.7 119 106-258 11-133 (294)
104 PF10503 Esterase_phd: Esteras 99.4 1.3E-11 2.8E-16 107.9 13.0 114 140-259 15-132 (220)
105 PF00975 Thioesterase: Thioest 99.3 5.4E-11 1.2E-15 107.5 17.2 100 142-259 1-104 (229)
106 cd00707 Pancreat_lipase_like P 99.3 1.3E-12 2.7E-17 120.3 6.5 106 140-260 35-148 (275)
107 PF08538 DUF1749: Protein of u 99.3 1.4E-11 3.1E-16 110.9 12.2 103 141-262 33-151 (303)
108 COG3243 PhaC Poly(3-hydroxyalk 99.3 2.8E-11 6E-16 111.9 12.9 107 140-260 106-218 (445)
109 PF12740 Chlorophyllase2: Chlo 99.3 4.9E-11 1.1E-15 105.5 13.6 107 137-259 13-131 (259)
110 KOG2100 Dipeptidyl aminopeptid 99.3 3.2E-11 7E-16 125.1 14.4 240 98-478 498-751 (755)
111 PRK05371 x-prolyl-dipeptidyl a 99.3 7.9E-11 1.7E-15 122.6 16.7 83 160-259 271-373 (767)
112 TIGR03502 lipase_Pla1_cef extr 99.3 2E-11 4.3E-16 124.5 11.2 132 100-244 420-575 (792)
113 PTZ00472 serine carboxypeptida 99.3 3.4E-10 7.3E-15 111.5 19.5 128 100-259 49-216 (462)
114 PF02129 Peptidase_S15: X-Pro 99.3 1.1E-10 2.4E-15 108.0 14.4 119 106-259 1-136 (272)
115 KOG3043 Predicted hydrolase re 99.3 8.9E-11 1.9E-15 99.0 12.1 180 142-475 40-241 (242)
116 KOG2281 Dipeptidyl aminopeptid 99.2 1.6E-10 3.4E-15 111.2 14.2 133 103-258 619-761 (867)
117 PF07859 Abhydrolase_3: alpha/ 99.2 7.4E-11 1.6E-15 105.1 11.4 98 144-259 1-110 (211)
118 KOG2551 Phospholipase/carboxyh 99.1 2.9E-09 6.3E-14 90.1 13.9 62 411-475 160-221 (230)
119 KOG4627 Kynurenine formamidase 99.1 2.4E-09 5.2E-14 88.8 12.4 53 408-460 201-253 (270)
120 PRK10252 entF enterobactin syn 99.1 1.8E-09 3.8E-14 122.5 15.5 101 139-258 1066-1170(1296)
121 COG3545 Predicted esterase of 99.1 3.8E-09 8.3E-14 86.1 12.9 90 142-258 3-93 (181)
122 PF06057 VirJ: Bacterial virul 99.1 7.4E-10 1.6E-14 92.5 8.8 97 142-259 3-107 (192)
123 PF07224 Chlorophyllase: Chlor 99.1 2.2E-09 4.8E-14 92.8 11.9 107 137-259 42-157 (307)
124 PF03959 FSH1: Serine hydrolas 99.0 1.8E-10 3.9E-15 102.0 5.1 48 411-459 158-206 (212)
125 COG0657 Aes Esterase/lipase [L 99.0 7.8E-09 1.7E-13 97.9 16.2 104 139-260 77-192 (312)
126 COG4099 Predicted peptidase [G 99.0 1.6E-09 3.5E-14 94.9 10.4 122 106-259 170-304 (387)
127 KOG3975 Uncharacterized conser 99.0 6.3E-09 1.4E-13 89.0 13.4 114 140-259 28-147 (301)
128 PF09752 DUF2048: Uncharacteri 99.0 1.1E-08 2.3E-13 93.9 15.7 107 140-258 91-209 (348)
129 KOG1515 Arylacetamide deacetyl 99.0 1.1E-08 2.3E-13 95.3 16.0 124 106-262 70-210 (336)
130 COG4188 Predicted dienelactone 99.0 1.5E-09 3.3E-14 99.7 9.8 98 140-247 70-182 (365)
131 PF06028 DUF915: Alpha/beta hy 99.0 2.1E-09 4.5E-14 96.4 9.2 117 140-261 10-145 (255)
132 PF12715 Abhydrolase_7: Abhydr 99.0 4.5E-10 9.7E-15 103.8 4.3 106 139-256 113-257 (390)
133 PF03403 PAF-AH_p_II: Platelet 99.0 2.2E-09 4.8E-14 102.9 8.9 118 139-258 98-261 (379)
134 PF08840 BAAT_C: BAAT / Acyl-C 98.9 5.1E-10 1.1E-14 98.9 3.0 68 409-476 110-212 (213)
135 COG3319 Thioesterase domains o 98.9 5.6E-08 1.2E-12 86.9 13.6 100 142-260 1-104 (257)
136 PF00450 Peptidase_S10: Serine 98.8 3.1E-07 6.7E-12 91.0 19.3 122 107-259 23-181 (415)
137 PRK04940 hypothetical protein; 98.8 1.6E-07 3.4E-12 78.6 14.2 52 416-472 126-178 (180)
138 COG3509 LpqC Poly(3-hydroxybut 98.8 2.5E-08 5.3E-13 88.3 9.6 136 103-259 40-179 (312)
139 PF07819 PGAP1: PGAP1-like pro 98.8 1.1E-08 2.5E-13 90.8 7.6 105 140-262 3-126 (225)
140 PF03583 LIP: Secretory lipase 98.7 1.6E-07 3.4E-12 87.1 13.2 64 413-479 218-286 (290)
141 PF11339 DUF3141: Protein of u 98.7 1.8E-06 3.8E-11 82.6 17.9 99 140-261 67-177 (581)
142 PF01674 Lipase_2: Lipase (cla 98.6 3.8E-08 8.3E-13 86.1 5.7 89 142-243 2-94 (219)
143 PF05677 DUF818: Chlamydia CHL 98.6 3.2E-06 6.9E-11 76.9 17.9 108 102-245 116-236 (365)
144 KOG3847 Phospholipase A2 (plat 98.6 8.4E-08 1.8E-12 85.0 7.3 42 138-180 115-156 (399)
145 KOG2112 Lysophospholipase [Lip 98.6 2.5E-07 5.5E-12 78.0 9.8 113 142-258 4-127 (206)
146 smart00824 PKS_TE Thioesterase 98.6 7.6E-07 1.6E-11 79.0 11.6 94 146-258 2-101 (212)
147 PLN02733 phosphatidylcholine-s 98.5 1.5E-07 3.2E-12 91.5 6.7 95 152-261 105-203 (440)
148 COG2936 Predicted acyl esteras 98.5 1.2E-06 2.7E-11 85.8 12.5 124 104-260 26-160 (563)
149 KOG1553 Predicted alpha/beta h 98.4 8.1E-07 1.8E-11 79.9 8.0 100 140-258 241-344 (517)
150 COG4814 Uncharacterized protei 98.4 7.4E-06 1.6E-10 70.9 12.6 114 142-260 46-177 (288)
151 KOG4840 Predicted hydrolases o 98.4 3E-05 6.5E-10 65.7 15.2 101 141-260 36-145 (299)
152 PRK10439 enterobactin/ferric e 98.3 6.3E-06 1.4E-10 80.2 12.7 106 140-259 208-323 (411)
153 PF05990 DUF900: Alpha/beta hy 98.3 2.3E-06 5E-11 76.6 8.7 106 139-258 16-136 (233)
154 KOG3253 Predicted alpha/beta h 98.3 3.6E-06 7.7E-11 81.4 9.4 67 408-474 298-374 (784)
155 PF00151 Lipase: Lipase; Inte 98.3 1.8E-07 4E-12 87.8 0.5 107 139-260 69-188 (331)
156 PF12048 DUF3530: Protein of u 98.2 0.0001 2.2E-09 69.0 17.7 117 142-259 88-229 (310)
157 PF08386 Abhydrolase_4: TAP-li 98.1 7.5E-06 1.6E-10 63.0 6.8 62 413-474 33-94 (103)
158 COG3150 Predicted esterase [Ge 98.1 6E-05 1.3E-09 61.0 11.9 91 144-261 2-93 (191)
159 PLN02209 serine carboxypeptida 98.1 0.00077 1.7E-08 66.1 22.1 59 414-473 351-434 (437)
160 PLN03016 sinapoylglucose-malat 98.1 0.00032 6.8E-09 68.8 19.3 59 414-473 347-430 (433)
161 KOG1282 Serine carboxypeptidas 98.1 0.00068 1.5E-08 65.9 20.9 61 414-474 363-448 (454)
162 COG1073 Hydrolases of the alph 98.1 4E-05 8.6E-10 71.9 12.5 71 405-475 222-298 (299)
163 PLN02606 palmitoyl-protein thi 98.1 0.00011 2.3E-09 66.8 14.0 100 141-259 26-132 (306)
164 KOG3101 Esterase D [General fu 98.1 2.4E-05 5.2E-10 65.7 9.0 119 141-260 44-177 (283)
165 KOG1551 Uncharacterized conser 98.1 0.00042 9.1E-09 60.5 16.2 58 417-475 309-367 (371)
166 cd00312 Esterase_lipase Estera 98.0 4.3E-05 9.3E-10 77.4 11.6 108 139-261 93-215 (493)
167 PF05705 DUF829: Eukaryotic pr 98.0 0.00014 3E-09 66.0 13.6 60 412-471 176-240 (240)
168 COG1770 PtrB Protease II [Amin 98.0 0.00016 3.5E-09 71.5 14.1 114 138-260 445-563 (682)
169 PF05577 Peptidase_S28: Serine 98.0 1.4E-05 3E-10 79.4 7.1 111 141-260 29-149 (434)
170 COG1075 LipA Predicted acetylt 98.0 8E-06 1.7E-10 77.5 4.7 101 141-259 59-164 (336)
171 PF00756 Esterase: Putative es 98.0 8.2E-06 1.8E-10 74.7 4.6 51 209-259 97-150 (251)
172 COG1505 Serine proteases of th 97.9 6.6E-05 1.4E-09 73.2 9.4 135 100-259 397-535 (648)
173 PLN02633 palmitoyl protein thi 97.9 0.00036 7.7E-09 63.5 13.1 101 141-259 25-131 (314)
174 COG0627 Predicted esterase [Ge 97.8 9.6E-05 2.1E-09 68.7 9.6 123 140-262 53-190 (316)
175 PF05057 DUF676: Putative seri 97.8 2.3E-05 5E-10 69.6 5.1 86 141-242 4-96 (217)
176 KOG2183 Prolylcarboxypeptidase 97.8 0.00011 2.3E-09 68.5 9.3 113 142-259 81-202 (492)
177 COG3946 VirJ Type IV secretory 97.8 0.0012 2.6E-08 61.5 16.1 92 144-256 263-362 (456)
178 PF10142 PhoPQ_related: PhoPQ- 97.8 0.0002 4.4E-09 67.6 11.4 70 405-477 253-323 (367)
179 PF10340 DUF2424: Protein of u 97.8 0.00033 7.1E-09 66.0 11.8 104 140-259 121-235 (374)
180 COG2272 PnbA Carboxylesterase 97.8 0.0002 4.3E-09 68.9 10.3 115 139-260 92-218 (491)
181 PF04301 DUF452: Protein of un 97.6 0.00036 7.9E-09 60.5 9.1 80 141-260 11-91 (213)
182 COG4782 Uncharacterized protei 97.5 0.00024 5.3E-09 65.4 7.2 110 139-259 114-234 (377)
183 KOG2237 Predicted serine prote 97.5 0.001 2.2E-08 65.6 11.7 114 138-260 467-585 (712)
184 KOG2541 Palmitoyl protein thio 97.5 0.0011 2.5E-08 58.2 10.6 99 142-258 24-127 (296)
185 PF11144 DUF2920: Protein of u 97.4 0.0029 6.4E-08 59.9 12.3 65 414-478 293-372 (403)
186 PLN02213 sinapoylglucose-malat 97.4 0.012 2.6E-07 55.7 16.3 59 414-473 233-316 (319)
187 COG4553 DepA Poly-beta-hydroxy 97.2 0.013 2.8E-07 52.3 13.5 106 139-262 101-212 (415)
188 PF02450 LCAT: Lecithin:choles 97.2 0.0013 2.8E-08 64.0 8.0 82 156-261 66-162 (389)
189 KOG3724 Negative regulator of 97.1 0.0014 3E-08 66.1 7.6 102 140-259 88-220 (973)
190 PF05576 Peptidase_S37: PS-10 97.1 0.006 1.3E-07 57.5 11.1 104 140-258 62-168 (448)
191 KOG2182 Hydrolytic enzymes of 97.1 0.0088 1.9E-07 57.7 12.3 113 140-260 85-208 (514)
192 COG2819 Predicted hydrolase of 97.1 0.0082 1.8E-07 53.5 11.2 50 210-259 120-172 (264)
193 COG2939 Carboxypeptidase C (ca 97.1 0.0098 2.1E-07 57.7 12.4 109 139-262 99-239 (498)
194 PF00135 COesterase: Carboxyle 97.0 0.00089 1.9E-08 68.7 5.6 107 140-260 124-246 (535)
195 PF02089 Palm_thioest: Palmito 97.0 0.00071 1.5E-08 61.0 3.6 105 140-259 4-116 (279)
196 PLN02517 phosphatidylcholine-s 96.5 0.0093 2E-07 59.2 7.7 90 156-261 157-265 (642)
197 PF06441 EHN: Epoxide hydrolas 96.4 0.0054 1.2E-07 47.5 4.5 46 97-161 67-112 (112)
198 KOG2369 Lecithin:cholesterol a 96.2 0.0089 1.9E-07 57.3 5.6 84 155-260 124-226 (473)
199 KOG3967 Uncharacterized conser 96.1 0.02 4.2E-07 48.7 6.6 105 141-259 101-227 (297)
200 cd00741 Lipase Lipase. Lipase 96.1 0.0059 1.3E-07 50.9 3.5 50 210-259 10-67 (153)
201 PF01764 Lipase_3: Lipase (cla 96.0 0.013 2.9E-07 47.9 5.3 38 209-246 49-86 (140)
202 KOG1516 Carboxylesterase and r 95.7 0.07 1.5E-06 54.9 10.4 109 141-262 112-235 (545)
203 COG4287 PqaA PhoPQ-activated p 95.6 0.071 1.5E-06 49.4 8.6 62 411-475 326-388 (507)
204 KOG1283 Serine carboxypeptidas 95.5 0.74 1.6E-05 42.1 14.4 97 140-250 30-148 (414)
205 COG4947 Uncharacterized protei 95.4 0.082 1.8E-06 43.4 7.4 43 217-259 94-136 (227)
206 COG2382 Fes Enterochelin ester 95.2 0.088 1.9E-06 47.9 7.8 37 224-260 177-213 (299)
207 PF04083 Abhydro_lipase: Parti 94.8 0.032 7E-07 38.1 2.9 47 98-157 13-59 (63)
208 PF11187 DUF2974: Protein of u 94.7 0.034 7.4E-07 49.3 3.7 48 214-262 75-126 (224)
209 PF07082 DUF1350: Protein of u 94.4 0.24 5.2E-06 43.9 8.2 77 155-256 34-122 (250)
210 PF06850 PHB_depo_C: PHB de-po 94.3 0.087 1.9E-06 44.6 5.0 61 414-474 134-202 (202)
211 cd00519 Lipase_3 Lipase (class 93.9 0.055 1.2E-06 48.6 3.5 25 222-246 126-150 (229)
212 KOG2521 Uncharacterized conser 93.9 1.6 3.4E-05 41.3 12.9 65 414-478 225-294 (350)
213 PF11288 DUF3089: Protein of u 93.8 0.11 2.4E-06 45.0 4.8 69 170-245 46-116 (207)
214 PLN02571 triacylglycerol lipas 93.5 0.092 2E-06 50.5 4.3 37 208-244 208-246 (413)
215 PLN02454 triacylglycerol lipas 93.4 0.11 2.3E-06 50.0 4.4 32 213-244 215-248 (414)
216 PF06259 Abhydrolase_8: Alpha/ 93.3 0.093 2E-06 44.5 3.5 55 207-261 87-146 (177)
217 COG2830 Uncharacterized protei 93.3 0.22 4.9E-06 40.4 5.4 78 143-260 13-91 (214)
218 PLN00413 triacylglycerol lipas 92.4 0.18 4E-06 49.1 4.7 36 208-243 268-303 (479)
219 PLN02162 triacylglycerol lipas 92.4 0.17 3.6E-06 49.2 4.4 37 207-243 261-297 (475)
220 PF07519 Tannase: Tannase and 92.4 0.32 6.9E-06 48.7 6.5 67 410-476 349-429 (474)
221 PF01083 Cutinase: Cutinase; 92.3 0.15 3.2E-06 43.7 3.5 41 219-259 76-122 (179)
222 KOG4372 Predicted alpha/beta h 92.2 0.19 4E-06 47.7 4.3 86 140-239 79-165 (405)
223 PLN02408 phospholipase A1 92.2 0.19 4E-06 47.7 4.3 36 210-245 184-221 (365)
224 KOG1202 Animal-type fatty acid 92.0 3.5 7.5E-05 44.9 13.3 95 139-258 2121-2218(2376)
225 PLN02934 triacylglycerol lipas 91.7 0.24 5.2E-06 48.7 4.5 36 208-243 305-340 (515)
226 PLN02324 triacylglycerol lipas 90.8 0.3 6.5E-06 47.0 4.2 35 210-244 199-235 (415)
227 PLN02802 triacylglycerol lipas 90.6 0.33 7.2E-06 47.7 4.3 36 210-245 314-351 (509)
228 PLN02310 triacylglycerol lipas 90.5 0.35 7.6E-06 46.5 4.3 37 208-244 189-229 (405)
229 PLN02753 triacylglycerol lipas 90.1 0.39 8.4E-06 47.5 4.3 35 210-244 293-332 (531)
230 PLN03037 lipase class 3 family 89.5 0.45 9.8E-06 47.0 4.2 36 209-244 299-338 (525)
231 PLN02719 triacylglycerol lipas 89.3 0.48 1E-05 46.7 4.3 35 210-244 279-318 (518)
232 PLN02761 lipase class 3 family 89.2 0.49 1.1E-05 46.7 4.3 36 209-244 273-314 (527)
233 PF05277 DUF726: Protein of un 87.4 0.96 2.1E-05 42.8 4.8 39 222-260 218-261 (345)
234 PLN02847 triacylglycerol lipas 85.5 1.2 2.6E-05 44.8 4.5 23 222-244 249-271 (633)
235 KOG4569 Predicted lipase [Lipi 85.5 1.1 2.4E-05 42.7 4.3 37 208-244 155-191 (336)
236 KOG4388 Hormone-sensitive lipa 84.7 3 6.5E-05 41.6 6.7 86 141-244 396-489 (880)
237 PF08237 PE-PPE: PE-PPE domain 81.9 4.5 9.8E-05 36.0 6.4 41 205-245 27-69 (225)
238 COG1448 TyrB Aspartate/tyrosin 75.1 6.1 0.00013 37.5 5.2 85 142-257 172-263 (396)
239 PF07519 Tannase: Tannase and 72.7 5.3 0.00012 40.1 4.6 39 223-261 114-152 (474)
240 COG5153 CVT17 Putative lipase 71.5 6.2 0.00013 35.7 4.2 25 221-245 273-297 (425)
241 KOG4540 Putative lipase essent 71.5 6.2 0.00013 35.7 4.2 25 221-245 273-297 (425)
242 KOG2029 Uncharacterized conser 69.3 7.8 0.00017 39.0 4.7 38 206-243 505-545 (697)
243 PF09949 DUF2183: Uncharacteri 61.7 26 0.00057 26.5 5.4 85 155-253 10-96 (100)
244 cd01714 ETF_beta The electron 54.9 55 0.0012 28.6 7.1 41 204-245 90-134 (202)
245 TIGR03712 acc_sec_asp2 accesso 54.0 2.4E+02 0.0053 28.2 14.1 86 140-245 288-378 (511)
246 COG4822 CbiK Cobalamin biosynt 53.5 65 0.0014 28.1 6.8 62 140-229 137-199 (265)
247 PF00698 Acyl_transf_1: Acyl t 51.2 12 0.00027 35.3 2.6 30 215-244 75-104 (318)
248 PRK10279 hypothetical protein; 50.2 24 0.00051 33.1 4.2 38 214-251 23-60 (300)
249 PRK12467 peptide synthase; Pro 50.0 50 0.0011 43.1 8.3 84 142-244 3693-3777(3956)
250 COG1073 Hydrolases of the alph 48.3 2.5 5.3E-05 39.2 -2.6 37 140-177 48-84 (299)
251 smart00827 PKS_AT Acyl transfe 47.2 19 0.00041 33.6 3.2 30 215-244 73-102 (298)
252 PF10605 3HBOH: 3HB-oligomer h 46.5 32 0.0007 35.0 4.6 37 226-262 287-324 (690)
253 COG3673 Uncharacterized conser 46.1 1.7E+02 0.0037 27.5 8.7 103 141-244 31-142 (423)
254 PF09994 DUF2235: Uncharacteri 44.9 1.3E+02 0.0028 27.8 8.3 39 205-243 71-111 (277)
255 TIGR03131 malonate_mdcH malona 44.5 21 0.00047 33.2 3.1 31 214-244 66-96 (295)
256 KOG2385 Uncharacterized conser 41.7 29 0.00063 34.5 3.4 42 220-261 443-489 (633)
257 PF06309 Torsin: Torsin; Inte 40.7 35 0.00076 27.1 3.2 29 139-167 50-80 (127)
258 TIGR00128 fabD malonyl CoA-acy 39.9 27 0.00058 32.4 3.0 30 216-245 74-104 (290)
259 cd07198 Patatin Patatin-like p 39.4 37 0.00079 28.7 3.5 32 215-246 17-48 (172)
260 cd07225 Pat_PNPLA6_PNPLA7 Pata 37.5 35 0.00075 32.1 3.3 32 214-245 33-64 (306)
261 cd07230 Pat_TGL4-5_like Triacy 36.4 47 0.001 32.8 4.2 37 217-253 94-130 (421)
262 PLN02748 tRNA dimethylallyltra 36.3 1.4E+02 0.0031 29.9 7.5 91 140-232 20-120 (468)
263 COG0529 CysC Adenylylsulfate k 36.1 1.8E+02 0.0039 24.9 6.7 45 139-184 20-68 (197)
264 COG3340 PepE Peptidase E [Amin 35.4 1.4E+02 0.003 26.2 6.2 37 140-177 31-70 (224)
265 cd07207 Pat_ExoU_VipD_like Exo 35.3 44 0.00096 28.7 3.5 31 215-245 18-48 (194)
266 PF06792 UPF0261: Uncharacteri 33.9 1.3E+02 0.0027 29.4 6.4 110 143-253 3-124 (403)
267 COG1752 RssA Predicted esteras 33.3 43 0.00093 31.5 3.3 32 214-245 29-60 (306)
268 cd07227 Pat_Fungal_NTE1 Fungal 33.1 48 0.001 30.5 3.4 32 214-245 28-59 (269)
269 PF10686 DUF2493: Protein of u 33.1 75 0.0016 22.3 3.6 32 141-175 31-63 (71)
270 KOG4389 Acetylcholinesterase/B 32.9 2E+02 0.0043 28.9 7.4 60 203-262 192-258 (601)
271 cd07232 Pat_PLPL Patain-like p 32.8 60 0.0013 31.9 4.2 36 219-254 90-125 (407)
272 cd07231 Pat_SDP1-like Sugar-De 32.4 66 0.0014 30.2 4.2 35 219-253 91-125 (323)
273 PLN02840 tRNA dimethylallyltra 32.1 1.9E+02 0.0041 28.6 7.3 91 140-232 19-119 (421)
274 COG0324 MiaA tRNA delta(2)-iso 32.0 1.1E+02 0.0024 28.7 5.5 89 142-232 3-101 (308)
275 cd07210 Pat_hypo_W_succinogene 31.1 57 0.0012 28.9 3.5 30 216-245 20-49 (221)
276 cd07228 Pat_NTE_like_bacteria 30.6 70 0.0015 27.0 3.9 31 216-246 20-50 (175)
277 cd07209 Pat_hypo_Ecoli_Z1214_l 30.5 73 0.0016 28.1 4.1 33 214-246 16-48 (215)
278 cd07229 Pat_TGL3_like Triacylg 30.0 74 0.0016 31.0 4.2 39 216-254 103-141 (391)
279 TIGR02816 pfaB_fam PfaB family 30.0 46 0.001 33.9 3.0 31 215-245 255-286 (538)
280 PRK02399 hypothetical protein; 29.6 2.3E+02 0.005 27.7 7.3 108 145-253 6-126 (406)
281 TIGR00521 coaBC_dfp phosphopan 27.5 3.5E+02 0.0075 26.5 8.4 73 142-231 113-193 (390)
282 PF00448 SRP54: SRP54-type pro 27.5 1.2E+02 0.0025 26.4 4.7 63 159-245 74-136 (196)
283 PF11713 Peptidase_C80: Peptid 26.7 47 0.001 27.6 2.0 36 201-236 73-116 (157)
284 cd03146 GAT1_Peptidase_E Type 26.2 1.5E+02 0.0032 26.0 5.3 40 140-179 30-70 (212)
285 KOG1209 1-Acyl dihydroxyaceton 25.9 1.1E+02 0.0023 27.0 4.0 37 140-178 5-41 (289)
286 PF13207 AAA_17: AAA domain; P 25.8 59 0.0013 25.2 2.4 32 144-177 1-32 (121)
287 TIGR02764 spore_ybaN_pdaB poly 25.6 43 0.00094 28.8 1.7 33 143-176 153-188 (191)
288 COG1582 FlgEa Uncharacterized 24.9 1.4E+02 0.003 20.3 3.4 41 437-478 22-62 (67)
289 cd07205 Pat_PNPLA6_PNPLA7_NTE1 24.9 95 0.0021 26.1 3.7 30 216-245 20-49 (175)
290 COG0279 GmhA Phosphoheptose is 24.7 98 0.0021 25.9 3.4 79 145-237 44-122 (176)
291 TIGR02884 spore_pdaA delta-lac 24.5 61 0.0013 28.8 2.5 34 142-176 187-221 (224)
292 COG3727 Vsr DNA G:T-mismatch r 24.3 1.1E+02 0.0023 24.4 3.3 34 141-175 57-114 (150)
293 COG3933 Transcriptional antite 24.2 2.9E+02 0.0064 27.3 6.9 72 142-240 110-181 (470)
294 PRK11613 folP dihydropteroate 23.9 3.9E+02 0.0085 24.8 7.6 17 223-239 210-226 (282)
295 cd07222 Pat_PNPLA4 Patatin-lik 23.8 1.1E+02 0.0023 27.7 4.0 24 227-251 34-57 (246)
296 TIGR02873 spore_ylxY probable 23.5 66 0.0014 29.5 2.6 33 143-176 232-264 (268)
297 COG2069 CdhD CO dehydrogenase/ 23.0 5.9E+02 0.013 23.6 8.1 49 164-232 159-207 (403)
298 cd07212 Pat_PNPLA9 Patatin-lik 22.8 1.2E+02 0.0025 28.7 4.1 19 227-245 35-53 (312)
299 PRK05282 (alpha)-aspartyl dipe 22.5 2.9E+02 0.0063 24.8 6.3 37 141-178 31-70 (233)
300 PRK00091 miaA tRNA delta(2)-is 22.0 2.9E+02 0.0062 26.0 6.5 78 142-221 4-89 (307)
301 cd07224 Pat_like Patatin-like 21.5 1.4E+02 0.003 26.7 4.2 31 216-246 19-51 (233)
302 PF14253 AbiH: Bacteriophage a 20.7 1E+02 0.0022 28.2 3.3 15 222-236 233-247 (270)
303 cd07204 Pat_PNPLA_like Patatin 20.7 1.6E+02 0.0035 26.5 4.4 23 227-249 34-57 (243)
304 cd08769 DAP_dppA_2 Peptidase M 20.4 4E+02 0.0086 24.5 6.8 59 411-475 144-204 (270)
305 PRK05579 bifunctional phosphop 20.2 5.9E+02 0.013 25.0 8.5 73 141-231 116-196 (399)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.7e-33 Score=264.81 Aligned_cols=287 Identities=22% Similarity=0.373 Sum_probs=184.0
Q ss_pred CCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCC
Q 011291 98 PDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDR 177 (489)
Q Consensus 98 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~ 177 (489)
.+.++++++|..++|...|++ +|+|||+||+++++..|..+++.|.++ |+|+++|+
T Consensus 8 ~~~~~~~~~~~~i~y~~~G~~----------------------~~~vlllHG~~~~~~~w~~~~~~L~~~--~~vi~~Dl 63 (294)
T PLN02824 8 VETRTWRWKGYNIRYQRAGTS----------------------GPALVLVHGFGGNADHWRKNTPVLAKS--HRVYAIDL 63 (294)
T ss_pred CCCceEEEcCeEEEEEEcCCC----------------------CCeEEEECCCCCChhHHHHHHHHHHhC--CeEEEEcC
Confidence 346788999999999987643 489999999999999999999999875 79999999
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcc
Q 011291 178 PAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 257 (489)
Q Consensus 178 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~ 257 (489)
||||.|+.+.... ......++++++++|+.+++++++.++++|+||||||++++.+|.++|++|+++|++++
T Consensus 64 pG~G~S~~~~~~~--------~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~ 135 (294)
T PLN02824 64 LGYGYSDKPNPRS--------APPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINI 135 (294)
T ss_pred CCCCCCCCCcccc--------ccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECC
Confidence 9999998643210 01124689999999999999999999999999999999999999999999999999997
Q ss_pred cccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhc
Q 011291 258 AILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRS 337 (489)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (489)
......... ......+....+. ..+.... .....+......
T Consensus 136 ~~~~~~~~~--------------------~~~~~~~~~~~~~------~~~~~~~---------~~~~~~~~~~~~---- 176 (294)
T PLN02824 136 SLRGLHIKK--------------------QPWLGRPFIKAFQ------NLLRETA---------VGKAFFKSVATP---- 176 (294)
T ss_pred Ccccccccc--------------------cchhhhHHHHHHH------HHHhchh---------HHHHHHHhhcCH----
Confidence 542110000 0000000000000 0000000 000000000000
Q ss_pred cccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccE
Q 011291 338 AVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPV 417 (489)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 417 (489)
..... .+...+.............+............+... ... .........+.++++|+
T Consensus 177 ---~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~l~~i~~P~ 237 (294)
T PLN02824 177 ---ETVKN---------ILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDF----ISY---SGGPLPEELLPAVKCPV 237 (294)
T ss_pred ---HHHHH---------HHHHhccChhhccHHHHHHHHhccCCchHHHHHHHH----hcc---ccccchHHHHhhcCCCe
Confidence 00000 000001111111111111111111111111111111 100 00112345678899999
Q ss_pred EEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHHHh
Q 011291 418 LIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 474 (489)
Q Consensus 418 Lii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~ 474 (489)
|+|+|++|.++|.+.++.+.+..+++++++++++||+++.|+|++|++.|.+||+++
T Consensus 238 lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 238 LIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred EEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999999999999999999888888899999999999999999999999999999764
No 2
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=2.3e-32 Score=243.22 Aligned_cols=298 Identities=24% Similarity=0.314 Sum_probs=196.5
Q ss_pred CCCCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEe
Q 011291 96 ADPDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAF 175 (489)
Q Consensus 96 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~ 175 (489)
..-++.+++.+|+.+||...|+. .+|.|+++||++...+.|+..+..|+.+ ||+|+++
T Consensus 20 ~~~~hk~~~~~gI~~h~~e~g~~---------------------~gP~illlHGfPe~wyswr~q~~~la~~-~~rviA~ 77 (322)
T KOG4178|consen 20 SAISHKFVTYKGIRLHYVEGGPG---------------------DGPIVLLLHGFPESWYSWRHQIPGLASR-GYRVIAP 77 (322)
T ss_pred hhcceeeEEEccEEEEEEeecCC---------------------CCCEEEEEccCCccchhhhhhhhhhhhc-ceEEEec
Confidence 45678889999999999998765 7899999999999999999999999997 9999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhh
Q 011291 176 DRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILI 255 (489)
Q Consensus 176 D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~ 255 (489)
|+||+|.|+.|.. ...|++..++.|+..++++++.++++++||+||+++|+.+|..+|++|+++|++
T Consensus 78 DlrGyG~Sd~P~~-------------~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~ 144 (322)
T KOG4178|consen 78 DLRGYGFSDAPPH-------------ISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTL 144 (322)
T ss_pred CCCCCCCCCCCCC-------------cceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEe
Confidence 9999999998654 378999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHHHHhhh
Q 011291 256 APAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSL-YKKVLSAT 334 (489)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 334 (489)
+.....+...... ... ..+...+...........+. .+... .+.....+
T Consensus 145 nv~~~~p~~~~~~-~~~-------------------~~f~~~~y~~~fQ~~~~~E~----------~~s~~~~~~~~~~~ 194 (322)
T KOG4178|consen 145 NVPFPNPKLKPLD-SSK-------------------AIFGKSYYICLFQEPGKPET----------ELSKDDTEMLVKTF 194 (322)
T ss_pred cCCCCCcccchhh-hhc-------------------cccCccceeEeccccCcchh----------hhccchhHHhHHhh
Confidence 9876522111000 000 00000000000000000000 00000 00000000
Q ss_pred hhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCC
Q 011291 335 LRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEIS 414 (489)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 414 (489)
.......... ... ..-..+..+.++.++.+.......+ .....++.+.+..... .....+.+++
T Consensus 195 ~~~~~~~~~~---~~~-------~~~~~~~w~t~edi~~~~~~f~~~g-~~gplNyyrn~~r~w~-----a~~~~~~~i~ 258 (322)
T KOG4178|consen 195 RTRKTPGPLI---VPK-------QPNENPLWLTEEDIAFYVSKFQIDG-FTGPLNYYRNFRRNWE-----AAPWALAKIT 258 (322)
T ss_pred hccccCCccc---cCC-------CCCCccchhhHHHHHHHHhcccccc-ccccchhhHHHhhCch-----hccccccccc
Confidence 0000000000 000 0000011233333444443333222 3333333333333210 1234568899
Q ss_pred ccEEEEecCCCCCCCch-hHHHHHhhCCCC-EEEEecCCCCCCccccHHHHHHHHHHHHHHh
Q 011291 415 CPVLIVTGDTDRIVPSW-NAERLSRAIPGS-TFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 474 (489)
Q Consensus 415 ~PvLii~G~~D~~vp~~-~~~~l~~~~~~~-~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~ 474 (489)
+||++|+|++|.+.+.. ..+.+.+.+++. +.++++|+||+++.|+|++|++.|..|+++.
T Consensus 259 iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 259 IPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 99999999999999866 566777777876 7889999999999999999999999999874
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.8e-32 Score=256.44 Aligned_cols=270 Identities=20% Similarity=0.284 Sum_probs=176.0
Q ss_pred CCceeeecc-----eEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEE
Q 011291 99 DSCFCEFNG-----VHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVL 173 (489)
Q Consensus 99 ~~~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi 173 (489)
..+++++++ .+++|...|.+ ++|+|||+||++++...|..+++.|.++ ||+|+
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~~G~~---------------------~~~~lvliHG~~~~~~~w~~~~~~L~~~-gy~vi 77 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVDEGPA---------------------DGPPVLLLHGEPSWSYLYRKMIPILAAA-GHRVI 77 (302)
T ss_pred CceeEeecCCCCceEEEEEEecCCC---------------------CCCEEEEECCCCCchhhHHHHHHHHHhC-CCEEE
Confidence 567788888 78999987754 4689999999999999999999999875 89999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHH
Q 011291 174 AFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALI 253 (489)
Q Consensus 174 ~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lv 253 (489)
++|+||||.|+++.. ...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|
T Consensus 78 ~~Dl~G~G~S~~~~~-------------~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lv 144 (302)
T PRK00870 78 APDLIGFGRSDKPTR-------------REDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLV 144 (302)
T ss_pred EECCCCCCCCCCCCC-------------cccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEE
Confidence 999999999975321 1357899999999999999999999999999999999999999999999999
Q ss_pred hhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 011291 254 LIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSA 333 (489)
Q Consensus 254 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (489)
++++......... ......|..+... .... ....... .
T Consensus 145 l~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~---~~~~----------~~~~~~~----~ 182 (302)
T PRK00870 145 VANTGLPTGDGPM-------------------------PDAFWAWRAFSQY---SPVL----------PVGRLVN----G 182 (302)
T ss_pred EeCCCCCCccccc-------------------------hHHHhhhhccccc---Cchh----------hHHHHhh----c
Confidence 9986432110000 0000000000000 0000 0000000 0
Q ss_pred hhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCC----cCCCCchhhhh
Q 011291 334 TLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDN----ESKMNPPLAKR 409 (489)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 409 (489)
... ..+..+....+........+.... .....+.... ...........
T Consensus 183 ~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (302)
T PRK00870 183 GTV---------------------------RDLSDAVRAAYDAPFPDESYKAGA-RAFPLLVPTSPDDPAVAANRAAWAV 234 (302)
T ss_pred ccc---------------------------ccCCHHHHHHhhcccCChhhhcch-hhhhhcCCCCCCCcchHHHHHHHHh
Confidence 000 000000000000000000000000 0000000000 00000112345
Q ss_pred cccCCccEEEEecCCCCCCCchhHHHHHhhCCCCE---EEEecCCCCCCccccHHHHHHHHHHHHHHh
Q 011291 410 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGST---FEVIKNCGHVPQEEKVEEFVSIVARFLQRA 474 (489)
Q Consensus 410 l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~---~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~ 474 (489)
+.++++|+++|+|++|.++|... +.+.+.+++++ +++++++||++++|+|+++++.|.+||+++
T Consensus 235 l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 235 LERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred hhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 78899999999999999999866 88999999876 889999999999999999999999999865
No 4
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3e-31 Score=255.05 Aligned_cols=288 Identities=25% Similarity=0.352 Sum_probs=177.1
Q ss_pred Cceeeecce-EEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCC
Q 011291 100 SCFCEFNGV-HLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRP 178 (489)
Q Consensus 100 ~~~~~~~g~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~ 178 (489)
..++.++|. +++|...|+... ...+|+|||+||++++...|..++..|.+ +|+|+++|+|
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~-----------------~~~gp~lvllHG~~~~~~~w~~~~~~L~~--~~~via~Dl~ 123 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEV-----------------TSSGPPVLLVHGFGASIPHWRRNIGVLAK--NYTVYAIDLL 123 (360)
T ss_pred CceEEECCceeEEEEEecCccc-----------------CCCCCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCC
Confidence 455677777 999998774300 11458999999999999999999999976 5999999999
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhh-hhhhHHHhHHhhcc
Q 011291 179 AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYF-EAPERVAALILIAP 257 (489)
Q Consensus 179 G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~-~~p~~v~~lvl~~~ 257 (489)
|||.|+++. ...++++++++++.+++++++.++++|+||||||.+++.++. .+|++|+++|++++
T Consensus 124 G~G~S~~~~--------------~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~ 189 (360)
T PLN02679 124 GFGASDKPP--------------GFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNC 189 (360)
T ss_pred CCCCCCCCC--------------CccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECC
Confidence 999997532 135789999999999999999999999999999999998887 47999999999997
Q ss_pred cccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhc
Q 011291 258 AILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRS 337 (489)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (489)
.......... . .+. .....+....+..+.... .....+..... ....++...
T Consensus 190 ~~~~~~~~~~-------------~-~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~---------- 241 (360)
T PLN02679 190 AGGMNNKAVV-------------D-DWR--IKLLLPLLWLIDFLLKQR-GIASALFNRVK-QRDNLKNIL---------- 241 (360)
T ss_pred cccccccccc-------------c-hHH--HhhhcchHHHHHHHhhch-hhHHHHHHHhc-CHHHHHHHH----------
Confidence 6422100000 0 000 000000000000000000 00000000000 000000000
Q ss_pred cccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccE
Q 011291 338 AVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPV 417 (489)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 417 (489)
...+.....+.++....+............+.... .. ....+....+.+|++||
T Consensus 242 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~l~~i~~Pt 295 (360)
T PLN02679 242 -------------------LSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIV----TG---PPGPNPIKLIPRISLPI 295 (360)
T ss_pred -------------------HHhccCcccCCHHHHHHHHhhccCCChHHHHHHHH----hc---CCCCCHHHHhhhcCCCE
Confidence 00000111111111111111111111111111111 10 01123445678899999
Q ss_pred EEEecCCCCCCCchh-----HHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHHHh
Q 011291 418 LIVTGDTDRIVPSWN-----AERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 474 (489)
Q Consensus 418 Lii~G~~D~~vp~~~-----~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~ 474 (489)
|+|+|++|.++|++. .+.+.+.++++++++|+++||++++|+|+++++.|.+||++.
T Consensus 296 Lii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 296 LVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred EEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 999999999998763 345667789999999999999999999999999999999864
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2e-31 Score=250.89 Aligned_cols=122 Identities=23% Similarity=0.340 Sum_probs=109.7
Q ss_pred CCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCC
Q 011291 98 PDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDR 177 (489)
Q Consensus 98 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~ 177 (489)
.+..+++.+|.+++|...| ++++|||+||++++...|..+++.|.++ |+||++|+
T Consensus 7 ~~~~~~~~~g~~i~y~~~G-----------------------~g~~vvllHG~~~~~~~w~~~~~~L~~~--~~via~D~ 61 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETG-----------------------EGDPIVFLHGNPTSSYLWRNIIPHLAGL--GRCLAPDL 61 (295)
T ss_pred CcceEEEECCEEEEEEEeC-----------------------CCCEEEEECCCCCCHHHHHHHHHHHhhC--CEEEEEcC
Confidence 4456778899999999875 3589999999999999999999999886 59999999
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcc
Q 011291 178 PAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 257 (489)
Q Consensus 178 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~ 257 (489)
||||.|+.+. ..+++.++++|+.+++++++.++++++||||||.+++.++.++|++|+++|++++
T Consensus 62 ~G~G~S~~~~---------------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 126 (295)
T PRK03592 62 IGMGASDKPD---------------IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEA 126 (295)
T ss_pred CCCCCCCCCC---------------CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECC
Confidence 9999998542 3478999999999999999999999999999999999999999999999999997
Q ss_pred cc
Q 011291 258 AI 259 (489)
Q Consensus 258 ~~ 259 (489)
..
T Consensus 127 ~~ 128 (295)
T PRK03592 127 IV 128 (295)
T ss_pred CC
Confidence 43
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.98 E-value=4.8e-31 Score=245.65 Aligned_cols=265 Identities=23% Similarity=0.272 Sum_probs=176.0
Q ss_pred ceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCC
Q 011291 101 CFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAF 180 (489)
Q Consensus 101 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~ 180 (489)
+++.++|.+++|...+.. ..+++|||+||++++...|..+++.|.+ +|+|+++|+|||
T Consensus 5 ~~~~~~~~~~~~~~~~~~--------------------~~~~plvllHG~~~~~~~w~~~~~~L~~--~~~vi~~Dl~G~ 62 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGK--------------------EGLTPLLIFNGIGANLELVFPFIEALDP--DLEVIAFDVPGV 62 (276)
T ss_pred EEeccCCcEEEEEEecCC--------------------CCCCcEEEEeCCCcchHHHHHHHHHhcc--CceEEEECCCCC
Confidence 456779999999875321 1247999999999999999999999976 499999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 181 GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 181 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
|.|+.+ ...++++++++++.+++++++.++++|+||||||++++.+|.++|++|+++|++++...
T Consensus 63 G~S~~~---------------~~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 63 GGSSTP---------------RHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAG 127 (276)
T ss_pred CCCCCC---------------CCcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCc
Confidence 999743 23578999999999999999999999999999999999999999999999999998753
Q ss_pred CccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhcccc
Q 011291 261 APRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVG 340 (489)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (489)
.... ......+......... .......
T Consensus 128 ~~~~---------------------------~~~~~~~~~~~~~~~~---------------~~~~~~~----------- 154 (276)
T TIGR02240 128 AVMV---------------------------PGKPKVLMMMASPRRY---------------IQPSHGI----------- 154 (276)
T ss_pred cccC---------------------------CCchhHHHHhcCchhh---------------hcccccc-----------
Confidence 2100 0000000000000000 0000000
Q ss_pred chhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEE
Q 011291 341 VTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIV 420 (489)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii 420 (489)
.....++...+. ..+. ........... ............ .. ..+....+.++++|+|+|
T Consensus 155 ~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~----~~~~~~~~~~~~-~~-------~~~~~~~l~~i~~P~lii 213 (276)
T TIGR02240 155 HIAPDIYGGAFR--------RDPE-LAMAHASKVRS----GGKLGYYWQLFA-GL-------GWTSIHWLHKIQQPTLVL 213 (276)
T ss_pred chhhhhccceee--------ccch-hhhhhhhhccc----CCCchHHHHHHH-Hc-------CCchhhHhhcCCCCEEEE
Confidence 000000000000 0000 00000000000 000000000000 00 012235578899999999
Q ss_pred ecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHHHhhCC
Q 011291 421 TGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFGY 477 (489)
Q Consensus 421 ~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~~~~ 477 (489)
+|++|.++|++..+.+.+.+++++++++++ ||+++.++|+++++.|.+|+++...+
T Consensus 214 ~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 214 AGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred EeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999986 99999999999999999999986544
No 7
>PLN02578 hydrolase
Probab=99.97 E-value=1.1e-29 Score=244.19 Aligned_cols=284 Identities=25% Similarity=0.419 Sum_probs=181.1
Q ss_pred CCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCC
Q 011291 99 DSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRP 178 (489)
Q Consensus 99 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~ 178 (489)
...+++.+|..++|...| ++|+|||+||++++...|..+++.|++ +|+|+++|+|
T Consensus 67 ~~~~~~~~~~~i~Y~~~g-----------------------~g~~vvliHG~~~~~~~w~~~~~~l~~--~~~v~~~D~~ 121 (354)
T PLN02578 67 GYNFWTWRGHKIHYVVQG-----------------------EGLPIVLIHGFGASAFHWRYNIPELAK--KYKVYALDLL 121 (354)
T ss_pred CceEEEECCEEEEEEEcC-----------------------CCCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCC
Confidence 357778899999998754 458899999999999999999999976 5999999999
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccc
Q 011291 179 AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 258 (489)
Q Consensus 179 G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~ 258 (489)
|||.|+++ ...++..++++++.++++.+..++++++|||+||++++.+|.++|++|+++|++++.
T Consensus 122 G~G~S~~~---------------~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 122 GFGWSDKA---------------LIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred CCCCCCCc---------------ccccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 99999853 245889999999999999999999999999999999999999999999999999876
Q ss_pred ccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHhhhh
Q 011291 259 ILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVA---KGMADMLHSLYKKVLSATL 335 (489)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 335 (489)
............ .... . ......+ ................. ......+..
T Consensus 187 ~~~~~~~~~~~~------~~~~---~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 239 (354)
T PLN02578 187 GQFGSESREKEE------AIVV---E-------ETVLTRF-VVKPLKEWFQRVVLGFLFWQAKQPSRIES---------- 239 (354)
T ss_pred cccccccccccc------cccc---c-------cchhhHH-HhHHHHHHHHHHHHHHHHHHhcCHHHHHH----------
Confidence 432110000000 0000 0 0000000 00000000000000000 000000000
Q ss_pred hccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCc
Q 011291 336 RSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISC 415 (489)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 415 (489)
.....+.......+...+.+............+.......+.. ....+..+.+.++++
T Consensus 240 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~ 297 (354)
T PLN02578 240 -------------------VLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFN---QSRYTLDSLLSKLSC 297 (354)
T ss_pred -------------------HHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcC---CCCCCHHHHhhcCCC
Confidence 0000111111111222222211111111122222222111111 111234567889999
Q ss_pred cEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHH
Q 011291 416 PVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 472 (489)
Q Consensus 416 PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~ 472 (489)
|+|+|+|++|.++|.+.++.+.+.+++++++++ ++||+++.|+|+++++.|.+|++
T Consensus 298 PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 298 PLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999 58999999999999999999985
No 8
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.97 E-value=2.4e-29 Score=244.55 Aligned_cols=293 Identities=17% Similarity=0.275 Sum_probs=173.1
Q ss_pred ceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHH-hhHHhHh--hCCCeEEEeCC
Q 011291 101 CFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNR-AMKPLAK--TTSSKVLAFDR 177 (489)
Q Consensus 101 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~-~~~~L~~--~~G~~Vi~~D~ 177 (489)
.+.+.+|.+++|...+|++ ...+|+|||+||++++...|.. ++..|.+ +.+|+|+++|+
T Consensus 179 ~~~~~~~~~l~~~~~gp~~------------------~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl 240 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKD------------------NKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDL 240 (481)
T ss_pred eeEeeCCeEEEEEEecCCC------------------CCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECC
Confidence 4455678899999998862 1235899999999999999985 4466653 12799999999
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHH-HHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhc
Q 011291 178 PAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL-YFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIA 256 (489)
Q Consensus 178 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~-~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~ 256 (489)
||||.|+.+. ...++++++++++. .++++++.++++++||||||++++.+|.++|++|+++|+++
T Consensus 241 ~G~G~S~~p~--------------~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~ 306 (481)
T PLN03087 241 LGFGRSPKPA--------------DSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLA 306 (481)
T ss_pred CCCCCCcCCC--------------CCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEEC
Confidence 9999997542 23588999999995 89999999999999999999999999999999999999998
Q ss_pred ccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 011291 257 PAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLR 336 (489)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (489)
++........ ............ ...... .........++..... ...
T Consensus 307 ~~~~~~~~~~-------------------------~~~~~~~~~~~~-~~~~~~------~~~~~~~~~w~~~~~~-~~~ 353 (481)
T PLN03087 307 PPYYPVPKGV-------------------------QATQYVMRKVAP-RRVWPP------IAFGASVACWYEHISR-TIC 353 (481)
T ss_pred CCccccccch-------------------------hHHHHHHHHhcc-cccCCc------cccchhHHHHHHHHHh-hhh
Confidence 7543210000 000000000000 000000 0000000000000000 000
Q ss_pred ccc--cchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCC
Q 011291 337 SAV--GVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEIS 414 (489)
Q Consensus 337 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 414 (489)
... ........ .. ..............+........+ ..+.... ..............+.+|+
T Consensus 354 ~~~~~~~~~~~~~---------~~-l~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~i----~~~~~~l~~~l~~l~~~I~ 418 (481)
T PLN03087 354 LVICKNHRLWEFL---------TR-LLTRNRMRTFLIEGFFCHTHNAAW-HTLHNII----CGSGSKLDGYLDHVRDQLK 418 (481)
T ss_pred cccccchHHHHHH---------HH-HhhhhhhhHHHHHHHHhccchhhH-HHHHHHH----hchhhhhhhHHHHHHHhCC
Confidence 000 00000000 00 000000111111111000000000 0000000 0000000001222334789
Q ss_pred ccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCcc-ccHHHHHHHHHHHHHH
Q 011291 415 CPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQE-EKVEEFVSIVARFLQR 473 (489)
Q Consensus 415 ~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~-e~p~~v~~~i~~fl~~ 473 (489)
+|+|+|+|++|.++|++..+.+++.+|++++++++++||++++ ++|+++++.|.+|+..
T Consensus 419 vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 419 CDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999885 9999999999999864
No 9
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=9.7e-30 Score=237.65 Aligned_cols=273 Identities=21% Similarity=0.308 Sum_probs=177.6
Q ss_pred CCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCC
Q 011291 98 PDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDR 177 (489)
Q Consensus 98 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~ 177 (489)
...++++++|.+++|...|+. ++|+|||+||++++...|..+++.|.+ +|+|+++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~g~~---------------------~~~~vv~~hG~~~~~~~~~~~~~~l~~--~~~vi~~D~ 62 (278)
T TIGR03056 6 DCSRRVTVGPFHWHVQDMGPT---------------------AGPLLLLLHGTGASTHSWRDLMPPLAR--SFRVVAPDL 62 (278)
T ss_pred CccceeeECCEEEEEEecCCC---------------------CCCeEEEEcCCCCCHHHHHHHHHHHhh--CcEEEeecC
Confidence 346778899999999998764 468999999999999999999999976 599999999
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcc
Q 011291 178 PAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 257 (489)
Q Consensus 178 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~ 257 (489)
||||.|+.+. ...++++++++|+.+++++++.++++|+||||||++++.+|.++|++++++|++++
T Consensus 63 ~G~G~S~~~~--------------~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 63 PGHGFTRAPF--------------RFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINA 128 (278)
T ss_pred CCCCCCCCcc--------------ccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcC
Confidence 9999997532 13578999999999999999999999999999999999999999999999999987
Q ss_pred cccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhc
Q 011291 258 AILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRS 337 (489)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (489)
......... ......+................ ......... .....
T Consensus 129 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~ 174 (278)
T TIGR03056 129 ALMPFEGMA-------------------------GTLFPYMARVLACNPFTPPMMSR-GAADQQRVE--------RLIRD 174 (278)
T ss_pred ccccccccc-------------------------ccccchhhHhhhhcccchHHHHh-hcccCcchh--------HHhhc
Confidence 542110000 00000000000000000000000 000000000 00000
Q ss_pred cccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccE
Q 011291 338 AVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPV 417 (489)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 417 (489)
.. ...... ....+................. .. +........+.++++|+
T Consensus 175 ~~-------------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~i~~P~ 223 (278)
T TIGR03056 175 TG-------------------SLLDKA-----GMTYYGRLIRSPAHVDGALSMM----AQ---WDLAPLNRDLPRITIPL 223 (278)
T ss_pred cc-------------------cccccc-----hhhHHHHhhcCchhhhHHHHHh----hc---ccccchhhhcccCCCCE
Confidence 00 000000 0000000000000000000000 00 01112335577899999
Q ss_pred EEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHH
Q 011291 418 LIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 472 (489)
Q Consensus 418 Lii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~ 472 (489)
|+|+|++|.++|++..+.+.+.++++++++++++||+++.+.|+++++.|.+|++
T Consensus 224 lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 224 HLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred EEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999984
No 10
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=1.6e-29 Score=243.05 Aligned_cols=272 Identities=19% Similarity=0.255 Sum_probs=174.1
Q ss_pred CCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc-hHHhhHHhHhhCCCeEEEeCC
Q 011291 99 DSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS-WNRAMKPLAKTTSSKVLAFDR 177 (489)
Q Consensus 99 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~-~~~~~~~L~~~~G~~Vi~~D~ 177 (489)
+....+.+|.+|+|..++|++ ...+++|||+||++++... |..++..|++. ||+|+++|+
T Consensus 63 ~~~~~~~~g~~l~~~~~~p~~------------------~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~ 123 (349)
T PLN02385 63 ESYEVNSRGVEIFSKSWLPEN------------------SRPKAAVCFCHGYGDTCTFFFEGIARKIASS-GYGVFAMDY 123 (349)
T ss_pred eeeEEcCCCCEEEEEEEecCC------------------CCCCeEEEEECCCCCccchHHHHHHHHHHhC-CCEEEEecC
Confidence 344556789999999998762 1245789999999988654 67888999886 999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCc------eEEEEEeCcchHHHHHHhhhhhhHHHh
Q 011291 178 PAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAE------KAILVGHSAGALVAVNSYFEAPERVAA 251 (489)
Q Consensus 178 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~------~v~liGhS~Gg~ial~~a~~~p~~v~~ 251 (489)
||||.|+.+. ....+++++++|+.++++.+..+ +++|+||||||++++.++.++|+++++
T Consensus 124 ~G~G~S~~~~--------------~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~g 189 (349)
T PLN02385 124 PGFGLSEGLH--------------GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDG 189 (349)
T ss_pred CCCCCCCCCC--------------CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhh
Confidence 9999997531 12357889999999999887543 799999999999999999999999999
Q ss_pred HHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 011291 252 LILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVL 331 (489)
Q Consensus 252 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (489)
+|+++|........ . .+. . .......+...+ ...
T Consensus 190 lVLi~p~~~~~~~~---------------------~----~~~-~----~~~~~~~~~~~~---------------p~~- 223 (349)
T PLN02385 190 AILVAPMCKIADDV---------------------V----PPP-L----VLQILILLANLL---------------PKA- 223 (349)
T ss_pred eeEecccccccccc---------------------c----Cch-H----HHHHHHHHHHHC---------------CCc-
Confidence 99999864321000 0 000 0 000000000000 000
Q ss_pred hhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcc
Q 011291 332 SATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLH 411 (489)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 411 (489)
.... ......... ... ............................ ..+....+.
T Consensus 224 -~~~~---~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~~~~~~l~ 276 (349)
T PLN02385 224 -KLVP---QKDLAELAF------------RDL--KKRKMAEYNVIAYKDKPRLRTAVELLRT---------TQEIEMQLE 276 (349)
T ss_pred -eecC---CCccccccc------------cCH--HHHHHhhcCcceeCCCcchHHHHHHHHH---------HHHHHHhcc
Confidence 0000 000000000 000 0000000000000000000111111100 013445678
Q ss_pred cCCccEEEEecCCCCCCCchhHHHHHhhC--CCCEEEEecCCCCCCccccHHH----HHHHHHHHHHHhhC
Q 011291 412 EISCPVLIVTGDTDRIVPSWNAERLSRAI--PGSTFEVIKNCGHVPQEEKVEE----FVSIVARFLQRAFG 476 (489)
Q Consensus 412 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~--~~~~~~~i~g~gH~~~~e~p~~----v~~~i~~fl~~~~~ 476 (489)
++++|+|+|+|++|.++|++.++.+.+.+ +++++++|+++||+++.++|++ +.+.|.+||+++..
T Consensus 277 ~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 277 EVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred cCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999887 5689999999999999998876 88999999998764
No 11
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=4e-29 Score=240.91 Aligned_cols=292 Identities=16% Similarity=0.166 Sum_probs=169.0
Q ss_pred eecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchH--HhhHHh-------HhhCCCeEEE
Q 011291 104 EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWN--RAMKPL-------AKTTSSKVLA 174 (489)
Q Consensus 104 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~--~~~~~L-------~~~~G~~Vi~ 174 (489)
..+|.+++|..+|..+.+ +-...+|+|||+||++++...|. .+...| ..+ +|+||+
T Consensus 46 ~~~g~~i~y~~~G~~~~~--------------~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~-~~~Via 110 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRN--------------ADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDAS-KYFIIL 110 (360)
T ss_pred CcCCceEEEEecCCCCcc--------------cccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCccccc-CCEEEE
Confidence 467899999998753000 00012689999999999987775 444444 133 699999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH-HHhcCceEE-EEEeCcchHHHHHHhhhhhhHHHhH
Q 011291 175 FDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI-DILAAEKAI-LVGHSAGALVAVNSYFEAPERVAAL 252 (489)
Q Consensus 175 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l-~~l~~~~v~-liGhS~Gg~ial~~a~~~p~~v~~l 252 (489)
+|+||||.|+.+.... ......++++++++++..++ +++++++++ |+||||||++++.+|.++|++|+++
T Consensus 111 ~Dl~GhG~S~~p~~~~--------~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~L 182 (360)
T PRK06489 111 PDGIGHGKSSKPSDGL--------RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDAL 182 (360)
T ss_pred eCCCCCCCCCCCCcCC--------CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhhee
Confidence 9999999998643210 00112588999999988854 889999985 8999999999999999999999999
Q ss_pred HhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHH
Q 011291 253 ILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGM----ADMLHSLYK 328 (489)
Q Consensus 253 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 328 (489)
|++++..... ......+.. .....+.... ...... .........
T Consensus 183 VLi~s~~~~~-----------------------------~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 230 (360)
T PRK06489 183 MPMASQPTEM-----------------------------SGRNWMWRR--MLIESIRNDP-AWNNGNYTTQPPSLKRANP 230 (360)
T ss_pred eeeccCcccc-----------------------------cHHHHHHHH--HHHHHHHhCC-CCCCCCCCCCHHHHHHHHH
Confidence 9998753111 000000000 0000000000 000000 000000000
Q ss_pred HHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhh
Q 011291 329 KVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAK 408 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (489)
.... .... ......... ..................... ...+...... . ...+...
T Consensus 231 -~~~~-------------~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~------~~~d~~~ 286 (360)
T PRK06489 231 -MFAI-------------ATSG-GTLAYQAQA-PTRAAADKLVDERLAAPVTAD-ANDFLYQWDS-S------RDYNPSP 286 (360)
T ss_pred -HHHH-------------HHhC-CHHHHHHhc-CChHHHHHHHHHHHHhhhhcC-HHHHHHHHHH-h------hccChHH
Confidence 0000 0000 000000000 000000001100000000000 0011110000 0 1124567
Q ss_pred hcccCCccEEEEecCCCCCCCchhH--HHHHhhCCCCEEEEecCC----CCCCccccHHHHHHHHHHHHHHhh
Q 011291 409 RLHEISCPVLIVTGDTDRIVPSWNA--ERLSRAIPGSTFEVIKNC----GHVPQEEKVEEFVSIVARFLQRAF 475 (489)
Q Consensus 409 ~l~~i~~PvLii~G~~D~~vp~~~~--~~l~~~~~~~~~~~i~g~----gH~~~~e~p~~v~~~i~~fl~~~~ 475 (489)
.+.+|++|||+|+|++|.++|++.+ +.+.+.+|++++++++++ ||+++ ++|++|++.|.+||+++.
T Consensus 287 ~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 287 DLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred HHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 7899999999999999999998865 789999999999999996 99997 899999999999998764
No 12
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=2.4e-29 Score=234.58 Aligned_cols=123 Identities=21% Similarity=0.266 Sum_probs=108.2
Q ss_pred CCCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeC
Q 011291 97 DPDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFD 176 (489)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D 176 (489)
.....+++.+|.+++|...| ++++|||+||++.+...|..+++.|.+ +|+|+++|
T Consensus 13 ~~~~~~~~~~~~~i~y~~~G-----------------------~~~~iv~lHG~~~~~~~~~~~~~~l~~--~~~vi~~D 67 (286)
T PRK03204 13 PFESRWFDSSRGRIHYIDEG-----------------------TGPPILLCHGNPTWSFLYRDIIVALRD--RFRCVAPD 67 (286)
T ss_pred cccceEEEcCCcEEEEEECC-----------------------CCCEEEEECCCCccHHHHHHHHHHHhC--CcEEEEEC
Confidence 35667888899999999864 358999999999988899999999976 59999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhc
Q 011291 177 RPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIA 256 (489)
Q Consensus 177 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~ 256 (489)
+||||.|+.+. ...++.+++++++.+++++++.++++++||||||.+++.++..+|++|+++|+++
T Consensus 68 ~~G~G~S~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~ 133 (286)
T PRK03204 68 YLGFGLSERPS--------------GFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGN 133 (286)
T ss_pred CCCCCCCCCCC--------------ccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEEC
Confidence 99999997532 1247889999999999999999999999999999999999999999999999887
Q ss_pred cc
Q 011291 257 PA 258 (489)
Q Consensus 257 ~~ 258 (489)
+.
T Consensus 134 ~~ 135 (286)
T PRK03204 134 TW 135 (286)
T ss_pred cc
Confidence 64
No 13
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.97 E-value=3.8e-29 Score=238.87 Aligned_cols=273 Identities=21% Similarity=0.260 Sum_probs=174.3
Q ss_pred CceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCC
Q 011291 100 SCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPA 179 (489)
Q Consensus 100 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G 179 (489)
...++.+|.+++|...|+. ++|+||||||++.+...|+.+++.|.+ +|+|+++|+||
T Consensus 107 ~~~~~~~~~~~~y~~~G~~---------------------~~~~ivllHG~~~~~~~w~~~~~~L~~--~~~Via~DlpG 163 (383)
T PLN03084 107 QSQASSDLFRWFCVESGSN---------------------NNPPVLLIHGFPSQAYSYRKVLPVLSK--NYHAIAFDWLG 163 (383)
T ss_pred eeEEcCCceEEEEEecCCC---------------------CCCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCCC
Confidence 4455678999999998754 468999999999999999999999976 69999999999
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 180 FGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 180 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
||.|+.+... ....+++.++++++.++++++++++++|+|||+||++++.+|.++|++|+++|+++++.
T Consensus 164 ~G~S~~p~~~-----------~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 164 FGFSDKPQPG-----------YGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred CCCCCCCccc-----------ccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 9999865321 12468999999999999999999999999999999999999999999999999999864
Q ss_pred cCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccc
Q 011291 260 LAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAV 339 (489)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (489)
..... ...... ..+.......+. .. ..... .... +..
T Consensus 233 ~~~~~----------------------------~~p~~l---~~~~~~l~~~~~---~~--~~~~~-~~~~----~~~-- 269 (383)
T PLN03084 233 TKEHA----------------------------KLPSTL---SEFSNFLLGEIF---SQ--DPLRA-SDKA----LTS-- 269 (383)
T ss_pred ccccc----------------------------cchHHH---HHHHHHHhhhhh---hc--chHHH-Hhhh----hcc--
Confidence 21100 000000 000000000000 00 00000 0000 000
Q ss_pred cchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhh-HHHHHHHHHhcCCcCCCCchhhhhc--ccCCcc
Q 011291 340 GVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDR-ALVEFTAALLIDNESKMNPPLAKRL--HEISCP 416 (489)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P 416 (489)
..+....++....+..++...+... .+......+.... .....+....+ ..+++|
T Consensus 270 ---------------------~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l-~~~~~~l~~~l~~~~i~vP 327 (383)
T PLN03084 270 ---------------------CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKEL-KKYIEEMRSILTDKNWKTP 327 (383)
T ss_pred ---------------------cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhccc-chhhHHHHhhhccccCCCC
Confidence 0000001111111111111111000 0000001000000 00000111111 468999
Q ss_pred EEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHH
Q 011291 417 VLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 472 (489)
Q Consensus 417 vLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~ 472 (489)
||+|+|++|.+++.+..+.+.+. .+.++++++++||+++.|+|+++++.|.+||.
T Consensus 328 vLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 328 ITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred EEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 99999999999999888888887 48999999999999999999999999999986
No 14
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=1.4e-29 Score=232.93 Aligned_cols=247 Identities=16% Similarity=0.206 Sum_probs=159.3
Q ss_pred cEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc
Q 011291 143 PMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 222 (489)
Q Consensus 143 ~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~ 222 (489)
+|||+||++.+...|..+++.|.+. ||+|+++|+||||.|+.+. ...++++++++|+.++++.++
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~-~~~via~Dl~G~G~S~~~~--------------~~~~~~~~~a~dl~~~l~~l~ 69 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAA-GFKSTCVDLTGAGISLTDS--------------NTVSSSDQYNRPLFALLSDLP 69 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhC-CceEEEecCCcCCCCCCCc--------------cccCCHHHHHHHHHHHHHhcC
Confidence 5999999999999999999999775 8999999999999997431 235789999999999999998
Q ss_pred C-ceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHH
Q 011291 223 A-EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTIL 301 (489)
Q Consensus 223 ~-~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
. ++++++||||||.+++.++.++|++|+++|++++....+..... ..+..
T Consensus 70 ~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~------------------------~~~~~----- 120 (255)
T PLN02965 70 PDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIIS------------------------PRLKN----- 120 (255)
T ss_pred CCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCcc------------------------HHHHh-----
Confidence 7 49999999999999999999999999999999986422210000 00000
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHH-HHhhhcCcccc
Q 011291 302 SMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEH-VIEGYTKPLRV 380 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 380 (489)
... ...... .................. .......+......... .......+..
T Consensus 121 -----~~~--------~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (255)
T PLN02965 121 -----VME--------GTEKIW--------DYTFGEGPDKPPTGIMMK---PEFVRHYYYNQSPLEDYTLSSKLLRPAP- 175 (255)
T ss_pred -----hhh--------ccccce--------eeeeccCCCCCcchhhcC---HHHHHHHHhcCCCHHHHHHHHHhcCCCC-
Confidence 000 000000 000000000000000000 00000000000000000 0000000000
Q ss_pred cchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccH
Q 011291 381 KGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKV 460 (489)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p 460 (489)
...+. ...+....+..+++|+++|+|++|.++|+..++.+.+.++++++++++++||++++|+|
T Consensus 176 ---~~~~~-------------~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p 239 (255)
T PLN02965 176 ---VRAFQ-------------DLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVP 239 (255)
T ss_pred ---Ccchh-------------hhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCH
Confidence 00000 00011224557899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 011291 461 EEFVSIVARFLQRA 474 (489)
Q Consensus 461 ~~v~~~i~~fl~~~ 474 (489)
++|++.|.+|++..
T Consensus 240 ~~v~~~l~~~~~~~ 253 (255)
T PLN02965 240 TTLFQYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 15
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=6.5e-29 Score=232.54 Aligned_cols=249 Identities=27% Similarity=0.425 Sum_probs=154.3
Q ss_pred CCCcEEEEccCCCCccchHH---hhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNR---AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY 216 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~---~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ 216 (489)
++|+||||||++++...|.. .+..+.+. ||+|+++|+||||.|+..... ...+ ...++++.+
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~-------------~~~~-~~~~~~l~~ 93 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDA-GYRVILKDSPGFNKSDAVVMD-------------EQRG-LVNARAVKG 93 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhC-CCEEEEECCCCCCCCCCCcCc-------------cccc-chhHHHHHH
Confidence 45789999999988877764 35566665 899999999999999753211 1112 246789999
Q ss_pred HHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHH
Q 011291 217 FIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLK 296 (489)
Q Consensus 217 ~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (489)
+++.++.++++++||||||++++.+|.++|++|+++|++++........ .+ .+. .
T Consensus 94 ~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----------------------~~--~~~-~ 148 (282)
T TIGR03343 94 LMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLF----------------------AP--MPM-E 148 (282)
T ss_pred HHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcccc----------------------cc--Cch-H
Confidence 9999999999999999999999999999999999999998753211000 00 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcC
Q 011291 297 VYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTK 376 (489)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (489)
.+..+.... ........ ........ ..+.............
T Consensus 149 ~~~~~~~~~----------~~~~~~~~----~~~~~~~~-------------------------~~~~~~~~~~~~~~~~ 189 (282)
T TIGR03343 149 GIKLLFKLY----------AEPSYETL----KQMLNVFL-------------------------FDQSLITEELLQGRWE 189 (282)
T ss_pred HHHHHHHHh----------cCCCHHHH----HHHHhhCc-------------------------cCcccCcHHHHHhHHH
Confidence 000000000 00000000 00000000 0000000000000000
Q ss_pred -cccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCC
Q 011291 377 -PLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVP 455 (489)
Q Consensus 377 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~ 455 (489)
..... .....+.... ........+....+.++++|+|+++|++|.+++++.++.+.+.++++++++++++||++
T Consensus 190 ~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~ 264 (282)
T TIGR03343 190 NIQRQP---EHLKNFLISS--QKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWA 264 (282)
T ss_pred HhhcCH---HHHHHHHHhc--cccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCC
Confidence 00000 0000000000 00000112345567899999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHH
Q 011291 456 QEEKVEEFVSIVARFLQ 472 (489)
Q Consensus 456 ~~e~p~~v~~~i~~fl~ 472 (489)
+.|+|+++++.|.+||+
T Consensus 265 ~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 265 QWEHADAFNRLVIDFLR 281 (282)
T ss_pred cccCHHHHHHHHHHHhh
Confidence 99999999999999996
No 16
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=4.8e-29 Score=229.92 Aligned_cols=245 Identities=22% Similarity=0.322 Sum_probs=161.2
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
++|+||++||++++...|..++..|.+ ||+|+++|+||||.|... ....++++++++++.++++
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~--------------~~~~~~~~~~~~~~~~~i~ 75 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLDVLTQ--RFHVVTYDHRGTGRSPGE--------------LPPGYSIAHMADDVLQLLD 75 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHHHHHh--ccEEEEEcCCCCCCCCCC--------------CcccCCHHHHHHHHHHHHH
Confidence 568999999999999999998888875 699999999999999743 2245789999999999999
Q ss_pred HhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHH
Q 011291 220 ILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYT 299 (489)
Q Consensus 220 ~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (489)
+++.++++++||||||++++.++.++|++|+++|++++...... .....+.
T Consensus 76 ~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~-----------------------------~~~~~~~ 126 (257)
T TIGR03611 76 ALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDP-----------------------------HTRRCFD 126 (257)
T ss_pred HhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCCh-----------------------------hHHHHHH
Confidence 99999999999999999999999999999999999987532210 0000000
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCccc
Q 011291 300 ILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLR 379 (489)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (489)
. ...++.. . ........ .. .... . ..+. ... .............. .
T Consensus 127 ~---~~~~~~~----~--~~~~~~~~-~~----~~~~---~---~~~~-~~~-----------~~~~~~~~~~~~~~-~- 172 (257)
T TIGR03611 127 V---RIALLQH----A--GPEAYVHA-QA----LFLY---P---ADWI-SEN-----------AARLAADEAHALAH-F- 172 (257)
T ss_pred H---HHHHHhc----c--Ccchhhhh-hh----hhhc---c---ccHh-hcc-----------chhhhhhhhhcccc-c-
Confidence 0 0000000 0 00000000 00 0000 0 0000 000 00000000000000 0
Q ss_pred ccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCcccc
Q 011291 380 VKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEK 459 (489)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~ 459 (489)
. ....+......+. ..+....+.++++|+|+++|++|.++|++.++.+.+.+++++++.++++||++++++
T Consensus 173 -~-~~~~~~~~~~~~~-------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 243 (257)
T TIGR03611 173 -P-GKANVLRRINALE-------AFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTD 243 (257)
T ss_pred -C-ccHHHHHHHHHHH-------cCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccC
Confidence 0 0001111111110 113345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011291 460 VEEFVSIVARFLQ 472 (489)
Q Consensus 460 p~~v~~~i~~fl~ 472 (489)
|+++++.|.+||+
T Consensus 244 ~~~~~~~i~~fl~ 256 (257)
T TIGR03611 244 PETFNRALLDFLK 256 (257)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999986
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=7.3e-29 Score=228.60 Aligned_cols=241 Identities=19% Similarity=0.261 Sum_probs=160.1
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
.++|+||++||++++...|..++..|.+ +|+|+++|+||||.|..+ ..++++++++|+.+++
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~s~~~----------------~~~~~~~~~~d~~~~l 75 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVN--DHDIIQVDMRNHGLSPRD----------------PVMNYPAMAQDLLDTL 75 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhh--CCeEEEECCCCCCCCCCC----------------CCCCHHHHHHHHHHHH
Confidence 4679999999999999999999999976 599999999999999742 3478999999999999
Q ss_pred HHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHH
Q 011291 219 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVY 298 (489)
Q Consensus 219 ~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (489)
++++.++++++||||||.+++.+|.++|++|+++|++++....... ......+
T Consensus 76 ~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~---------------------------~~~~~~~ 128 (255)
T PRK10673 76 DALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV---------------------------RRHDEIF 128 (255)
T ss_pred HHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc---------------------------hhhHHHH
Confidence 9999999999999999999999999999999999999753211100 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcc
Q 011291 299 TILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPL 378 (489)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (489)
..+..... ...... ........ . ..............+....
T Consensus 129 ~~~~~~~~----------~~~~~~--~~~~~~~~-------------------------~-~~~~~~~~~~~~~~~~~~~ 170 (255)
T PRK10673 129 AAINAVSE----------AGATTR--QQAAAIMR-------------------------Q-HLNEEGVIQFLLKSFVDGE 170 (255)
T ss_pred HHHHHhhh----------cccccH--HHHHHHHH-------------------------H-hcCCHHHHHHHHhcCCcce
Confidence 00000000 000000 00000000 0 0000000000110000000
Q ss_pred cccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccc
Q 011291 379 RVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEE 458 (489)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e 458 (489)
.......+....... .....+..+++|+|+|+|++|..++.+..+.+.+.++++++++++++||+++++
T Consensus 171 -~~~~~~~~~~~~~~~----------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 239 (255)
T PRK10673 171 -WRFNVPVLWDQYPHI----------VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAE 239 (255)
T ss_pred -eEeeHHHHHHhHHHH----------hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeecc
Confidence 000000000000000 011345678999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHH
Q 011291 459 KVEEFVSIVARFLQR 473 (489)
Q Consensus 459 ~p~~v~~~i~~fl~~ 473 (489)
+|+++++.|.+||++
T Consensus 240 ~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 240 KPDAVLRAIRRYLND 254 (255)
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999999975
No 18
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.96 E-value=7.8e-29 Score=228.35 Aligned_cols=242 Identities=23% Similarity=0.277 Sum_probs=150.5
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 221 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l 221 (489)
|+||||||++++...|..+++.|.++ |+|+++|+||||.|+.. ..++++++++++. ++
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~~~--~~vi~~Dl~G~G~S~~~----------------~~~~~~~~~~~l~----~~ 71 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELSSH--FTLHLVDLPGFGRSRGF----------------GALSLADMAEAVL----QQ 71 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHhcC--CEEEEecCCCCCCCCCC----------------CCCCHHHHHHHHH----hc
Confidence 46999999999999999999999864 99999999999999732 2367777766654 35
Q ss_pred cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHH
Q 011291 222 AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTIL 301 (489)
Q Consensus 222 ~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
..++++++||||||.+++.+|.++|++|+++|++++........ .. + .........+
T Consensus 72 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~-----------------~~----~--~~~~~~~~~~ 128 (256)
T PRK10349 72 APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARD-----------------EW----P--GIKPDVLAGF 128 (256)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCC-----------------CC----C--cccHHHHHHH
Confidence 67899999999999999999999999999999998753211000 00 0 0000000000
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCccccc
Q 011291 302 SMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVK 381 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (489)
...+.. ........+.... ..... .. ... .......+... ...
T Consensus 129 ---~~~~~~-------~~~~~~~~~~~~~---~~~~~---~~-------------------~~~-~~~~~~~~~~~-~~~ 171 (256)
T PRK10349 129 ---QQQLSD-------DFQRTVERFLALQ---TMGTE---TA-------------------RQD-ARALKKTVLAL-PMP 171 (256)
T ss_pred ---HHHHHh-------chHHHHHHHHHHH---HccCc---hH-------------------HHH-HHHHHHHhhcc-CCC
Confidence 000000 0000000000000 00000 00 000 00000000000 000
Q ss_pred chhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHH
Q 011291 382 GWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVE 461 (489)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~ 461 (489)
. ...+.. ....+. ..+....+.++++|||+|+|++|.++|.+.++.+.+.++++++++++++||++++|+|+
T Consensus 172 ~-~~~~~~-~~~~~~------~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~ 243 (256)
T PRK10349 172 E-VDVLNG-GLEILK------TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPA 243 (256)
T ss_pred c-HHHHHH-HHHHHH------hCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHH
Confidence 0 000000 000000 11345677889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011291 462 EFVSIVARFLQR 473 (489)
Q Consensus 462 ~v~~~i~~fl~~ 473 (489)
+|++.|.+|-++
T Consensus 244 ~f~~~l~~~~~~ 255 (256)
T PRK10349 244 EFCHLLVALKQR 255 (256)
T ss_pred HHHHHHHHHhcc
Confidence 999999998653
No 19
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=1.3e-28 Score=236.18 Aligned_cols=299 Identities=15% Similarity=0.135 Sum_probs=165.3
Q ss_pred eecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhh---HHhHhhCCCeEEEeCCCCC
Q 011291 104 EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAM---KPLAKTTSSKVLAFDRPAF 180 (489)
Q Consensus 104 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~---~~L~~~~G~~Vi~~D~~G~ 180 (489)
+++|.+++|..+|+.+ .+..|+||++||++++...|..++ +.|... +|+||++|+|||
T Consensus 22 ~~~~~~l~y~~~G~~~------------------~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~ 82 (339)
T PRK07581 22 TLPDARLAYKTYGTLN------------------AAKDNAILYPTWYSGTHQDNEWLIGPGRALDPE-KYFIIIPNMFGN 82 (339)
T ss_pred CcCCceEEEEecCccC------------------CCCCCEEEEeCCCCCCcccchhhccCCCccCcC-ceEEEEecCCCC
Confidence 3578899999998631 123456777777777766676543 466554 799999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHH----HHHHhcCce-EEEEEeCcchHHHHHHhhhhhhHHHhHHhh
Q 011291 181 GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY----FIDILAAEK-AILVGHSAGALVAVNSYFEAPERVAALILI 255 (489)
Q Consensus 181 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~----~l~~l~~~~-v~liGhS~Gg~ial~~a~~~p~~v~~lvl~ 255 (489)
|.|+.+.... .......+....+++|+.+ +++++++++ ++|+||||||++|+.+|.++|++|+++|++
T Consensus 83 G~S~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli 155 (339)
T PRK07581 83 GLSSSPSNTP-------APFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPI 155 (339)
T ss_pred CCCCCCCCCC-------CCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheee
Confidence 9998643210 0000111211224455544 668899999 579999999999999999999999999999
Q ss_pred cccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHH-H------HH-HHhhhHHHHHHHH
Q 011291 256 APAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQA-M------MQ-VAKGMADMLHSLY 327 (489)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~-~~~~~~~~~~~~~ 327 (489)
++...... ....+ .......+... . .. .............
T Consensus 156 ~~~~~~~~------------------------------~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (339)
T PRK07581 156 AGTAKTTP------------------------------HNFVF--LEGLKAALTADPAFNGGWYAEPPERGLRAHARVYA 203 (339)
T ss_pred ecCCCCCH------------------------------HHHHH--HHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 87542110 00000 00000000000 0 00 0000000000000
Q ss_pred HH-HHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchh
Q 011291 328 KK-VLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPL 406 (489)
Q Consensus 328 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (489)
.. ....++... ...... .......................+...+.......+... .....+.
T Consensus 204 ~~~~~~~~~~~~--------~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~d~ 267 (339)
T PRK07581 204 GWGFSQAFYRQE--------LWRAMG-------YASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRN-PAYGGDL 267 (339)
T ss_pred HHHhHHHHHHhh--------hccccC-------hhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccC-cccCCCH
Confidence 00 000000000 000000 000000000111111000010111111100100000000 0001245
Q ss_pred hhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecC-CCCCCccccHHHHHHHHHHHHHHhhC
Q 011291 407 AKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKN-CGHVPQEEKVEEFVSIVARFLQRAFG 476 (489)
Q Consensus 407 ~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g-~gH~~~~e~p~~v~~~i~~fl~~~~~ 476 (489)
...+.+|++|||+|+|++|..+|+..++.+.+.+++++++++++ +||++++++++++++.|.+||++.++
T Consensus 268 ~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 268 AAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred HHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 67788999999999999999999999999999999999999998 89999999999999999999998764
No 20
>PHA02857 monoglyceride lipase; Provisional
Probab=99.96 E-value=3.5e-28 Score=226.61 Aligned_cols=261 Identities=15% Similarity=0.230 Sum_probs=168.4
Q ss_pred ceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCC
Q 011291 101 CFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAF 180 (489)
Q Consensus 101 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~ 180 (489)
.+++.||.+|+|..|.|. ....+.|+++||+++++..|..+++.|.++ ||+|+++|+|||
T Consensus 4 ~~~~~~g~~l~~~~~~~~-------------------~~~~~~v~llHG~~~~~~~~~~~~~~l~~~-g~~via~D~~G~ 63 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPI-------------------TYPKALVFISHGAGEHSGRYEELAENISSL-GILVFSHDHIGH 63 (276)
T ss_pred eeecCCCCEEEEEeccCC-------------------CCCCEEEEEeCCCccccchHHHHHHHHHhC-CCEEEEccCCCC
Confidence 456679999999999774 124567778899999999999999999986 999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh----cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhc
Q 011291 181 GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL----AAEKAILVGHSAGALVAVNSYFEAPERVAALILIA 256 (489)
Q Consensus 181 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~ 256 (489)
|.|++. .....++.++++|+...++.+ ...+++++||||||++++.+|.++|++++++|+++
T Consensus 64 G~S~~~--------------~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~ 129 (276)
T PHA02857 64 GRSNGE--------------KMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMS 129 (276)
T ss_pred CCCCCc--------------cCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEec
Confidence 999742 112346667777777776654 34689999999999999999999999999999999
Q ss_pred ccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 011291 257 PAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLR 336 (489)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (489)
|...... ..+.. ....... .. ....
T Consensus 130 p~~~~~~----------------------------~~~~~------~~~~~~~----~~----------~~~~------- 154 (276)
T PHA02857 130 PLVNAEA----------------------------VPRLN------LLAAKLM----GI----------FYPN------- 154 (276)
T ss_pred ccccccc----------------------------ccHHH------HHHHHHH----HH----------hCCC-------
Confidence 8542110 00000 0000000 00 0000
Q ss_pred ccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccc-hhhHHHHHHHHHhcCCcCCCCchhhhhcccCCc
Q 011291 337 SAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKG-WDRALVEFTAALLIDNESKMNPPLAKRLHEISC 415 (489)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 415 (489)
............. ... +.......+..... ....+....... ..+....+.++++
T Consensus 155 ~~~~~~~~~~~~~---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~i~~ 210 (276)
T PHA02857 155 KIVGKLCPESVSR---------------DMD-EVYKYQYDPLVNHEKIKAGFASQVLKA--------TNKVRKIIPKIKT 210 (276)
T ss_pred CccCCCCHhhccC---------------CHH-HHHHHhcCCCccCCCccHHHHHHHHHH--------HHHHHHhcccCCC
Confidence 0000000000000 000 00000001100000 000000000000 0123456789999
Q ss_pred cEEEEecCCCCCCCchhHHHHHhhC-CCCEEEEecCCCCCCccccH---HHHHHHHHHHHHHh
Q 011291 416 PVLIVTGDTDRIVPSWNAERLSRAI-PGSTFEVIKNCGHVPQEEKV---EEFVSIVARFLQRA 474 (489)
Q Consensus 416 PvLii~G~~D~~vp~~~~~~l~~~~-~~~~~~~i~g~gH~~~~e~p---~~v~~~i~~fl~~~ 474 (489)
|||+++|++|.++|++.++.+.+.+ +++++++++++||.++.|.+ +++.+.|.+||+++
T Consensus 211 Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 211 PILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998887 46899999999999998865 67999999999886
No 21
>PRK10749 lysophospholipase L2; Provisional
Probab=99.96 E-value=2.2e-28 Score=232.91 Aligned_cols=133 Identities=17% Similarity=0.133 Sum_probs=110.8
Q ss_pred CCCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeC
Q 011291 97 DPDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFD 176 (489)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D 176 (489)
..+..++..+|.+++|..++++ ..+++||++||++++...|..++..|.+. ||+|+++|
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~--------------------~~~~~vll~HG~~~~~~~y~~~~~~l~~~-g~~v~~~D 88 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP--------------------HHDRVVVICPGRIESYVKYAELAYDLFHL-GYDVLIID 88 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC--------------------CCCcEEEEECCccchHHHHHHHHHHHHHC-CCeEEEEc
Confidence 4456667789999999999864 13578999999999988999999989886 99999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh----cCceEEEEEeCcchHHHHHHhhhhhhHHHhH
Q 011291 177 RPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL----AAEKAILVGHSAGALVAVNSYFEAPERVAAL 252 (489)
Q Consensus 177 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~liGhS~Gg~ial~~a~~~p~~v~~l 252 (489)
+||||.|+++... ......++++++++|+..+++.+ +..+++++||||||.+++.++.++|++|+++
T Consensus 89 ~~G~G~S~~~~~~---------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~l 159 (330)
T PRK10749 89 HRGQGRSGRLLDD---------PHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAI 159 (330)
T ss_pred CCCCCCCCCCCCC---------CCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceE
Confidence 9999999754211 01122358899999999999887 6679999999999999999999999999999
Q ss_pred Hhhcccc
Q 011291 253 ILIAPAI 259 (489)
Q Consensus 253 vl~~~~~ 259 (489)
|+++|..
T Consensus 160 vl~~p~~ 166 (330)
T PRK10749 160 ALCAPMF 166 (330)
T ss_pred EEECchh
Confidence 9998864
No 22
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=1.6e-28 Score=229.34 Aligned_cols=266 Identities=30% Similarity=0.471 Sum_probs=167.5
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
..+++||++|||+++...|+.++..|.+..|+.|+++|++|+|.++..+ ....|+..++++.+..++
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~-------------~~~~y~~~~~v~~i~~~~ 122 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLP-------------RGPLYTLRELVELIRRFV 122 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCC-------------CCCceehhHHHHHHHHHH
Confidence 4689999999999999999999999998767999999999999665432 234599999999999999
Q ss_pred HHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHH---hhcccccCccccccccccCCCCCcccccccccccccchhhhH
Q 011291 219 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALI---LIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFL 295 (489)
Q Consensus 219 ~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (489)
.....++++++|||+||++|+.+|+.+|+.|+++| ++++........ ..
T Consensus 123 ~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~----------------------------~~ 174 (326)
T KOG1454|consen 123 KEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKG----------------------------IK 174 (326)
T ss_pred HhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcc----------------------------hh
Confidence 99999999999999999999999999999999999 555544322100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhc
Q 011291 296 KVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYT 375 (489)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (489)
.....+..+. ...+.......... ...+.... ...............+.......
T Consensus 175 ~~~~~~~~~~---------------~~~~~~~p~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 229 (326)
T KOG1454|consen 175 GLRRLLDKFL---------------SALELLIPLSLTEP---------VRLVSEGL-LRCLKVVYTDPSRLLEKLLHLLS 229 (326)
T ss_pred HHHHhhhhhc---------------cHhhhcCccccccc---------hhheeHhh-hcceeeeccccccchhhhhhhee
Confidence 0000000000 00000000000000 00000000 00000000011111111111111
Q ss_pred CcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCC-ccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCC
Q 011291 376 KPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEIS-CPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHV 454 (489)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~ 454 (489)
.+.....+......+...... ........+.++. ||+|+++|++|+++|.+.++.+.+.++|+++++++++||.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~ 304 (326)
T KOG1454|consen 230 RPVKEHFHRDARLSLFLELLG-----FDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHL 304 (326)
T ss_pred cccccchhhhheeeEEEeccC-----ccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcc
Confidence 110000001111111000000 0123344566676 9999999999999999999999999999999999999999
Q ss_pred CccccHHHHHHHHHHHHHHhh
Q 011291 455 PQEEKVEEFVSIVARFLQRAF 475 (489)
Q Consensus 455 ~~~e~p~~v~~~i~~fl~~~~ 475 (489)
+++|.|+++++.|..|+..+.
T Consensus 305 ~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 305 PHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred cccCCHHHHHHHHHHHHHHhc
Confidence 999999999999999998763
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=3e-27 Score=216.85 Aligned_cols=240 Identities=24% Similarity=0.378 Sum_probs=159.7
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
.+|+||++||++.+...|..+++.|.. ||+|+++|+||||.|+.. ...+++.++++++.++++
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~--~~~v~~~d~~G~G~s~~~---------------~~~~~~~~~~~~~~~~i~ 74 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP--DFRVLRYDKRGHGLSDAP---------------EGPYSIEDLADDVLALLD 74 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc--ccEEEEecCCCCCCCCCC---------------CCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999988864 799999999999999642 245789999999999999
Q ss_pred HhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHH
Q 011291 220 ILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYT 299 (489)
Q Consensus 220 ~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (489)
.++.++++++||||||++++.+|.++|++|+++|++++....... ..+..
T Consensus 75 ~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~---------------------------~~~~~--- 124 (251)
T TIGR02427 75 HLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTP---------------------------ESWNA--- 124 (251)
T ss_pred HhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCch---------------------------hhHHH---
Confidence 999999999999999999999999999999999999865321100 00000
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCccc
Q 011291 300 ILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLR 379 (489)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (489)
...... .. .... .........+. ..+.. ............... ..
T Consensus 125 ~~~~~~---~~-------~~~~----~~~~~~~~~~~------------~~~~~--------~~~~~~~~~~~~~~~-~~ 169 (251)
T TIGR02427 125 RIAAVR---AE-------GLAA----LADAVLERWFT------------PGFRE--------AHPARLDLYRNMLVR-QP 169 (251)
T ss_pred HHhhhh---hc-------cHHH----HHHHHHHHHcc------------ccccc--------CChHHHHHHHHHHHh-cC
Confidence 000000 00 0000 00000000000 00000 000000000000000 00
Q ss_pred ccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCcccc
Q 011291 380 VKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEK 459 (489)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~ 459 (489)
...+...... + ...+....+.++++|+++++|++|.++|.+..+.+.+.+++.++++++++||++++++
T Consensus 170 ----~~~~~~~~~~-~------~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 238 (251)
T TIGR02427 170 ----PDGYAGCCAA-I------RDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQ 238 (251)
T ss_pred ----HHHHHHHHHH-H------hcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccC
Confidence 0000000000 0 1123445678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011291 460 VEEFVSIVARFLQ 472 (489)
Q Consensus 460 p~~v~~~i~~fl~ 472 (489)
|+++.+.|.+||+
T Consensus 239 p~~~~~~i~~fl~ 251 (251)
T TIGR02427 239 PEAFNAALRDFLR 251 (251)
T ss_pred hHHHHHHHHHHhC
Confidence 9999999999984
No 24
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=4.4e-28 Score=231.64 Aligned_cols=276 Identities=17% Similarity=0.227 Sum_probs=170.6
Q ss_pred CCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCc-cchHHhhHHhHhhCCCeEEEeCC
Q 011291 99 DSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASV-FSWNRAMKPLAKTTSSKVLAFDR 177 (489)
Q Consensus 99 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~-~~~~~~~~~L~~~~G~~Vi~~D~ 177 (489)
...+...+|.+|+|+.+++... ...+++|||+||++.+. ..|..+...|.++ ||+|+++|+
T Consensus 34 ~~~~~~~dg~~l~~~~~~~~~~-----------------~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~-Gy~V~~~D~ 95 (330)
T PLN02298 34 KSFFTSPRGLSLFTRSWLPSSS-----------------SPPRALIFMVHGYGNDISWTFQSTAIFLAQM-GFACFALDL 95 (330)
T ss_pred cceEEcCCCCEEEEEEEecCCC-----------------CCCceEEEEEcCCCCCcceehhHHHHHHHhC-CCEEEEecC
Confidence 3455567999999999876510 01346799999998664 3466677788886 999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcC------ceEEEEEeCcchHHHHHHhhhhhhHHHh
Q 011291 178 PAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA------EKAILVGHSAGALVAVNSYFEAPERVAA 251 (489)
Q Consensus 178 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~------~~v~liGhS~Gg~ial~~a~~~p~~v~~ 251 (489)
||||.|++.. ....+++++++|+..+++.+.. .+++|+||||||++++.++.++|++|++
T Consensus 96 rGhG~S~~~~--------------~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~ 161 (330)
T PLN02298 96 EGHGRSEGLR--------------AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDG 161 (330)
T ss_pred CCCCCCCCcc--------------ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCccccee
Confidence 9999997421 1235788899999999998753 3799999999999999999999999999
Q ss_pred HHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 011291 252 LILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVL 331 (489)
Q Consensus 252 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (489)
+|++++........ . ..+. .......+. ......
T Consensus 162 lvl~~~~~~~~~~~----------------------~---~~~~-----~~~~~~~~~---------------~~~~~~- 195 (330)
T PLN02298 162 AVLVAPMCKISDKI----------------------R---PPWP-----IPQILTFVA---------------RFLPTL- 195 (330)
T ss_pred EEEecccccCCccc----------------------C---CchH-----HHHHHHHHH---------------HHCCCC-
Confidence 99998864221000 0 0000 000000000 000000
Q ss_pred hhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcc
Q 011291 332 SATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLH 411 (489)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 411 (489)
............ ..... .. .+.......+... ....+...+.... ......+.
T Consensus 196 ---~~~~~~~~~~~~----~~~~~-~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~------------~~~~~~l~ 248 (330)
T PLN02298 196 ---AIVPTADLLEKS----VKVPA-KK------IIAKRNPMRYNGK-PRLGTVVELLRVT------------DYLGKKLK 248 (330)
T ss_pred ---ccccCCCccccc----ccCHH-HH------HHHHhCccccCCC-ccHHHHHHHHHHH------------HHHHHhhh
Confidence 000000000000 00000 00 0000000000000 0000111111000 02345678
Q ss_pred cCCccEEEEecCCCCCCCchhHHHHHhhCC--CCEEEEecCCCCCCccccHH----HHHHHHHHHHHHhhCCCc
Q 011291 412 EISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQEEKVE----EFVSIVARFLQRAFGYSE 479 (489)
Q Consensus 412 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~~--~~~~~~i~g~gH~~~~e~p~----~v~~~i~~fl~~~~~~~~ 479 (489)
++++|+|+|+|++|.++|++.++.+.+.++ ++++++++|+||+++.++|+ ++.+.|.+||++..+...
T Consensus 249 ~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~ 322 (330)
T PLN02298 249 DVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKA 322 (330)
T ss_pred hcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 899999999999999999999999988874 78999999999999987774 577889999999875443
No 25
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.96 E-value=2.2e-27 Score=222.59 Aligned_cols=281 Identities=15% Similarity=0.218 Sum_probs=166.2
Q ss_pred eeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccch-HHhhHHhHhhCCCeEEEeCCCCC
Q 011291 102 FCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSW-NRAMKPLAKTTSSKVLAFDRPAF 180 (489)
Q Consensus 102 ~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~-~~~~~~L~~~~G~~Vi~~D~~G~ 180 (489)
+++.++..+.|...+++ +++++||++||++++...| ..+...+.+ .||+|+++|+|||
T Consensus 6 ~~~~~~~~~~~~~~~~~--------------------~~~~~vl~~hG~~g~~~~~~~~~~~~l~~-~g~~vi~~d~~G~ 64 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGE--------------------GEKIKLLLLHGGPGMSHEYLENLRELLKE-EGREVIMYDQLGC 64 (288)
T ss_pred eecCCCCeEEEEeccCC--------------------CCCCeEEEEcCCCCccHHHHHHHHHHHHh-cCCEEEEEcCCCC
Confidence 45677888888876643 2468999999987766554 445455554 3899999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 181 GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 181 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
|.|..+... ...++++++++++.+++++++.++++++||||||.+++.++.++|++++++|++++...
T Consensus 65 G~s~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 65 GYSDQPDDS------------DELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS 132 (288)
T ss_pred CCCCCCCcc------------cccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc
Confidence 999753211 12478999999999999999999999999999999999999999999999999987542
Q ss_pred CccccccccccCCCCCcccccccccccccchhhhHHHHHHHH-HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccc
Q 011291 261 APRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILS-MFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAV 339 (489)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (489)
.+. ......... .+.......+..... ........+.........
T Consensus 133 ~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--- 178 (288)
T TIGR01250 133 APE------------------------------YVKELNRLRKELPPEVRAAIKRCEA-SGDYDNPEYQEAVEVFYH--- 178 (288)
T ss_pred chH------------------------------HHHHHHHHHhhcChhHHHHHHHHHh-ccCcchHHHHHHHHHHHH---
Confidence 210 000000000 000000000000000 000000000000000000
Q ss_pred cchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEE
Q 011291 340 GVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLI 419 (489)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLi 419 (489)
.......... ........... ..+...+... ..+.........+....+.++++|+|+
T Consensus 179 ------------------~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~i~~P~li 236 (288)
T TIGR01250 179 ------------------HLLCRTRKWP-EALKHLKSGMN-TNVYNIMQGP--NEFTITGNLKDWDITDKLSEIKVPTLL 236 (288)
T ss_pred ------------------Hhhcccccch-HHHHHHhhccC-HHHHhcccCC--ccccccccccccCHHHHhhccCCCEEE
Confidence 0000000000 00000000000 0000000000 000000001122455677889999999
Q ss_pred EecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHH
Q 011291 420 VTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 472 (489)
Q Consensus 420 i~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~ 472 (489)
++|++|.+ ++...+.+.+.++++++++++++||+++.++|+++++.|.+||+
T Consensus 237 i~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 237 TVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred EecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 99999985 56778889999999999999999999999999999999999984
No 26
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=1.7e-27 Score=228.17 Aligned_cols=120 Identities=24% Similarity=0.308 Sum_probs=97.5
Q ss_pred CceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCcc------------chHHhhH---Hh
Q 011291 100 SCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVF------------SWNRAMK---PL 164 (489)
Q Consensus 100 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~------------~~~~~~~---~L 164 (489)
..+...+|.+++|..+|+. ++++||+||+.++.. .|..++. .|
T Consensus 38 ~~~~~~~~~~l~y~~~G~~----------------------~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L 95 (343)
T PRK08775 38 MRHAGLEDLRLRYELIGPA----------------------GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRAL 95 (343)
T ss_pred ecCCCCCCceEEEEEeccC----------------------CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCcc
Confidence 3444568899999998743 346777777666655 6888886 56
Q ss_pred HhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceE-EEEEeCcchHHHHHHhh
Q 011291 165 AKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKA-ILVGHSAGALVAVNSYF 243 (489)
Q Consensus 165 ~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v-~liGhS~Gg~ial~~a~ 243 (489)
..+ +|+||++|+||||.|.. ..+++.++++|+.+++++++++++ +++||||||++++.+|.
T Consensus 96 ~~~-~~~Vi~~Dl~G~g~s~~-----------------~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~ 157 (343)
T PRK08775 96 DPA-RFRLLAFDFIGADGSLD-----------------VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFAS 157 (343)
T ss_pred Ccc-ccEEEEEeCCCCCCCCC-----------------CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHH
Confidence 443 69999999999998742 246788999999999999999775 79999999999999999
Q ss_pred hhhhHHHhHHhhcccc
Q 011291 244 EAPERVAALILIAPAI 259 (489)
Q Consensus 244 ~~p~~v~~lvl~~~~~ 259 (489)
++|++|+++|++++..
T Consensus 158 ~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 158 RHPARVRTLVVVSGAH 173 (343)
T ss_pred HChHhhheEEEECccc
Confidence 9999999999998753
No 27
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=1.5e-27 Score=212.80 Aligned_cols=268 Identities=22% Similarity=0.254 Sum_probs=166.2
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
.+.+++|||||+|++...|...++.|++. +.|+++|++|+|+|++|.-.. ........+++-|+...
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~~--~~vyaiDllG~G~SSRP~F~~-----------d~~~~e~~fvesiE~WR 154 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAKI--RNVYAIDLLGFGRSSRPKFSI-----------DPTTAEKEFVESIEQWR 154 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhhc--CceEEecccCCCCCCCCCCCC-----------CcccchHHHHHHHHHHH
Confidence 46789999999999999999999999984 999999999999999986542 22334448888899999
Q ss_pred HHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHH
Q 011291 219 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVY 298 (489)
Q Consensus 219 ~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (489)
...++++.+|+|||+||+++..||.+||++|..|||++|.+......... .. ......|
T Consensus 155 ~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~----------------~~-----~~~~~~w 213 (365)
T KOG4409|consen 155 KKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEP----------------EF-----TKPPPEW 213 (365)
T ss_pred HHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcch----------------hh-----cCCChHH
Confidence 99999999999999999999999999999999999999988765321000 00 0000111
Q ss_pred HH--HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhc-
Q 011291 299 TI--LSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYT- 375 (489)
Q Consensus 299 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 375 (489)
.. ......+-+-.+. +.+...-..+. .++..+.... .+....++.+..|.
T Consensus 214 ~~~~~~~~~~~nPl~~L---R~~Gp~Gp~Lv---------------------~~~~~d~~~k---~~~~~~ed~l~~YiY 266 (365)
T KOG4409|consen 214 YKALFLVATNFNPLALL---RLMGPLGPKLV---------------------SRLRPDRFRK---FPSLIEEDFLHEYIY 266 (365)
T ss_pred HhhhhhhhhcCCHHHHH---HhccccchHHH---------------------hhhhHHHHHh---ccccchhHHHHHHHH
Confidence 10 0000000000000 00000000001 1111111111 11111111111111
Q ss_pred Ccccccch-hhHHHHHHHHHhcCCcCCCCchhhhhcccCC--ccEEEEecCCCCCCCchhHHHHHhhC--CCCEEEEecC
Q 011291 376 KPLRVKGW-DRALVEFTAALLIDNESKMNPPLAKRLHEIS--CPVLIVTGDTDRIVPSWNAERLSRAI--PGSTFEVIKN 450 (489)
Q Consensus 376 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~PvLii~G~~D~~vp~~~~~~l~~~~--~~~~~~~i~g 450 (489)
.-...... ...+... .....+.+....+.+..++ |||++|+|++|.+- ......+...+ ..++++++++
T Consensus 267 ~~n~~~psgE~~fk~l-----~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~ 340 (365)
T KOG4409|consen 267 HCNAQNPSGETAFKNL-----FEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPG 340 (365)
T ss_pred HhcCCCCcHHHHHHHH-----HhccchhhhhHHHHHHhhccCCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecC
Confidence 11111111 1111111 1122234456667777776 99999999999764 44455555543 3489999999
Q ss_pred CCCCCccccHHHHHHHHHHHHHH
Q 011291 451 CGHVPQEEKVEEFVSIVARFLQR 473 (489)
Q Consensus 451 ~gH~~~~e~p~~v~~~i~~fl~~ 473 (489)
+||.+++++|+.|++.|..+++.
T Consensus 341 aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 341 AGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred CCceeecCCHHHHHHHHHHHHhc
Confidence 99999999999999999999875
No 28
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=3e-27 Score=227.28 Aligned_cols=134 Identities=19% Similarity=0.288 Sum_probs=102.0
Q ss_pred eecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCcc-----------chHHhh---HHhHhhCC
Q 011291 104 EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVF-----------SWNRAM---KPLAKTTS 169 (489)
Q Consensus 104 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~-----------~~~~~~---~~L~~~~G 169 (489)
.++|.+|+|..+|+++ ...+++|||+||++++.. .|..++ ..|..+ +
T Consensus 12 ~~~~~~~~y~~~g~~~------------------~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-~ 72 (351)
T TIGR01392 12 VLSDVRVAYETYGTLN------------------AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTD-R 72 (351)
T ss_pred ccCCceEEEEeccccC------------------CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCC-c
Confidence 4688999999999741 123578999999999763 477765 255454 7
Q ss_pred CeEEEeCCCC--CCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCce-EEEEEeCcchHHHHHHhhhhh
Q 011291 170 SKVLAFDRPA--FGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEK-AILVGHSAGALVAVNSYFEAP 246 (489)
Q Consensus 170 ~~Vi~~D~~G--~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~-v~liGhS~Gg~ial~~a~~~p 246 (489)
|+||++|+|| ||.|....... ...........++++++++++..+++++++++ ++++||||||++++.+|.++|
T Consensus 73 ~~vi~~D~~G~~~g~s~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p 149 (351)
T TIGR01392 73 YFVVCSNVLGGCYGSTGPSSINP---GGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYP 149 (351)
T ss_pred eEEEEecCCCCCCCCCCCCCCCC---CCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHCh
Confidence 9999999999 55554321110 00000111235899999999999999999999 999999999999999999999
Q ss_pred hHHHhHHhhcccc
Q 011291 247 ERVAALILIAPAI 259 (489)
Q Consensus 247 ~~v~~lvl~~~~~ 259 (489)
++|+++|++++..
T Consensus 150 ~~v~~lvl~~~~~ 162 (351)
T TIGR01392 150 ERVRAIVVLATSA 162 (351)
T ss_pred HhhheEEEEccCC
Confidence 9999999999864
No 29
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=1.2e-27 Score=230.05 Aligned_cols=264 Identities=16% Similarity=0.253 Sum_probs=167.4
Q ss_pred eecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCC
Q 011291 104 EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLT 183 (489)
Q Consensus 104 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S 183 (489)
..++..++|..|.|.. ....++||++||++++...|..++..|+++ ||+|+++|+||||.|
T Consensus 117 ~~~~~~l~~~~~~p~~------------------~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~-Gy~V~~~D~rGhG~S 177 (395)
T PLN02652 117 GARRNALFCRSWAPAA------------------GEMRGILIIIHGLNEHSGRYLHFAKQLTSC-GFGVYAMDWIGHGGS 177 (395)
T ss_pred CCCCCEEEEEEecCCC------------------CCCceEEEEECCchHHHHHHHHHHHHHHHC-CCEEEEeCCCCCCCC
Confidence 3467889999998751 123568999999999988899999999986 999999999999999
Q ss_pred CCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcC----ceEEEEEeCcchHHHHHHhhhhh---hHHHhHHhhc
Q 011291 184 SRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA----EKAILVGHSAGALVAVNSYFEAP---ERVAALILIA 256 (489)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~v~liGhS~Gg~ial~~a~~~p---~~v~~lvl~~ 256 (489)
++.. ....+.+.+++|+..+++.+.. .+++++||||||.+++.++. +| ++++++|+.+
T Consensus 178 ~~~~--------------~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~s 242 (395)
T PLN02652 178 DGLH--------------GYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTS 242 (395)
T ss_pred CCCC--------------CCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEEC
Confidence 7531 1235778889999999988753 37999999999999997664 55 3799999988
Q ss_pred ccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 011291 257 PAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLR 336 (489)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (489)
|....... .+... .+..+ + ........ +.
T Consensus 243 P~l~~~~~---------------------------~~~~~---~~~~l-------~-----------~~~~p~~~---~~ 271 (395)
T PLN02652 243 PALRVKPA---------------------------HPIVG---AVAPI-------F-----------SLVAPRFQ---FK 271 (395)
T ss_pred cccccccc---------------------------hHHHH---HHHHH-------H-----------HHhCCCCc---cc
Confidence 75421100 00000 00000 0 00000000 00
Q ss_pred ccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCcc
Q 011291 337 SAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCP 416 (489)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 416 (489)
.. .. ... ....++. .....+..+....++...... ...... .......+.+|++|
T Consensus 272 ~~-~~---------~~~----~~s~~~~----~~~~~~~dp~~~~g~i~~~~~--~~~~~~-----~~~l~~~L~~I~vP 326 (395)
T PLN02652 272 GA-NK---------RGI----PVSRDPA----ALLAKYSDPLVYTGPIRVRTG--HEILRI-----SSYLTRNFKSVTVP 326 (395)
T ss_pred Cc-cc---------ccC----CcCCCHH----HHHHHhcCCCcccCCchHHHH--HHHHHH-----HHHHHhhcccCCCC
Confidence 00 00 000 0000000 011111111111111110000 000000 00234567889999
Q ss_pred EEEEecCCCCCCCchhHHHHHhhCC--CCEEEEecCCCCCCccc-cHHHHHHHHHHHHHHhhCC
Q 011291 417 VLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQEE-KVEEFVSIVARFLQRAFGY 477 (489)
Q Consensus 417 vLii~G~~D~~vp~~~~~~l~~~~~--~~~~~~i~g~gH~~~~e-~p~~v~~~i~~fl~~~~~~ 477 (489)
+|+++|++|.++|++.++.+.+.++ +.++++++|++|.++.+ .++++.+.|.+||+++...
T Consensus 327 vLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 327 FMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999988865 47899999999998776 7899999999999988753
No 30
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.95 E-value=6.1e-27 Score=211.25 Aligned_cols=228 Identities=29% Similarity=0.473 Sum_probs=153.3
Q ss_pred EEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcC
Q 011291 144 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 223 (489)
Q Consensus 144 VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~ 223 (489)
|||+||++++...|..+++.|+ + ||+|+++|+||+|.|+.+.. ...++++++++|+.+++++++.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~-------------~~~~~~~~~~~~l~~~l~~~~~ 65 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-R-GYRVIAFDLPGHGRSDPPPD-------------YSPYSIEDYAEDLAELLDALGI 65 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-T-TSEEEEEECTTSTTSSSHSS-------------GSGGSHHHHHHHHHHHHHHTTT
T ss_pred eEEECCCCCCHHHHHHHHHHHh-C-CCEEEEEecCCccccccccc-------------cCCcchhhhhhhhhhccccccc
Confidence 7999999999999999999995 4 89999999999999985421 2468899999999999999999
Q ss_pred ceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHH
Q 011291 224 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 303 (489)
Q Consensus 224 ~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (489)
++++++|||+||.+++.++.++|++|+++|++++........ ........+..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~---------------------------~~~~~~~~~~~ 118 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSP---------------------------SRSFGPSFIRR 118 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHH---------------------------CHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccceeecccccccccc---------------------------cccccchhhhh
Confidence 999999999999999999999999999999999876332100 00000000000
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccch
Q 011291 304 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 383 (489)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (489)
........ ........+... . ..... ...... .
T Consensus 119 ~~~~~~~~-------~~~~~~~~~~~~--------------------~----------~~~~~-~~~~~~---------~ 151 (228)
T PF12697_consen 119 LLAWRSRS-------LRRLASRFFYRW--------------------F----------DGDEP-EDLIRS---------S 151 (228)
T ss_dssp HHHHHHHH-------HHHHHHHHHHHH--------------------H----------THHHH-HHHHHH---------H
T ss_pred hhhccccc-------cccccccccccc--------------------c----------ccccc-cccccc---------c
Confidence 00000000 000000000000 0 00000 000000 0
Q ss_pred hhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHH
Q 011291 384 DRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 463 (489)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v 463 (489)
...+....... ....+....+.++++|+++++|++|.+++.+..+.+.+.++++++++++++||++++++|++|
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 225 (228)
T PF12697_consen 152 RRALAEYLRSN------LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEV 225 (228)
T ss_dssp HHHHHHHHHHH------HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHH
T ss_pred ccccccccccc------cccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHH
Confidence 00011100000 000134567788899999999999999999999999999999999999999999999999998
Q ss_pred HHH
Q 011291 464 VSI 466 (489)
Q Consensus 464 ~~~ 466 (489)
++.
T Consensus 226 ~~a 228 (228)
T PF12697_consen 226 AEA 228 (228)
T ss_dssp HHH
T ss_pred hcC
Confidence 763
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.95 E-value=2e-27 Score=217.19 Aligned_cols=241 Identities=22% Similarity=0.265 Sum_probs=149.5
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 221 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l 221 (489)
|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.. ..++++++++++..++
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~----------------~~~~~~~~~~~~~~~~--- 63 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSA--HFTLHLVDLPGHGRSRGF----------------GPLSLADAAEAIAAQA--- 63 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhcc--CeEEEEecCCcCccCCCC----------------CCcCHHHHHHHHHHhC---
Confidence 7899999999999999999999976 599999999999998642 2356777777665443
Q ss_pred cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHH
Q 011291 222 AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTIL 301 (489)
Q Consensus 222 ~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
.++++++||||||.+++.++.++|++++++|++++........ .+. . .........
T Consensus 64 -~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~-------------~~~-------~--~~~~~~~~~- 119 (245)
T TIGR01738 64 -PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSARE-------------DWP-------E--GIKPDVLTG- 119 (245)
T ss_pred -CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCC-------------ccc-------c--cCCHHHHHH-
Confidence 3799999999999999999999999999999998753211000 000 0 000000000
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCccccc
Q 011291 302 SMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVK 381 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (489)
+....... ........... ...... ............+... ...
T Consensus 120 --~~~~~~~~-------~~~~~~~~~~~---~~~~~~-----------------------~~~~~~~~~~~~~~~~-~~~ 163 (245)
T TIGR01738 120 --FQQQLSDD-------YQRTIERFLAL---QTLGTP-----------------------TARQDARALKQTLLAR-PTP 163 (245)
T ss_pred --HHHHhhhh-------HHHHHHHHHHH---HHhcCC-----------------------ccchHHHHHHHHhhcc-CCC
Confidence 00000000 00000000000 000000 0000000000000000 000
Q ss_pred chhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHH
Q 011291 382 GWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVE 461 (489)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~ 461 (489)
. ...+......+ ...+....+.++++|||+++|++|.++|++..+.+.+.++++++++++++||++++|+|+
T Consensus 164 ~-~~~~~~~~~~~-------~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 235 (245)
T TIGR01738 164 N-VQVLQAGLEIL-------ATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAE 235 (245)
T ss_pred C-HHHHHHHHHHh-------hcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHH
Confidence 0 00011100000 012345567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 011291 462 EFVSIVARFL 471 (489)
Q Consensus 462 ~v~~~i~~fl 471 (489)
++++.|.+|+
T Consensus 236 ~~~~~i~~fi 245 (245)
T TIGR01738 236 AFCALLVAFK 245 (245)
T ss_pred HHHHHHHhhC
Confidence 9999999985
No 32
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.95 E-value=7.5e-27 Score=213.39 Aligned_cols=99 Identities=19% Similarity=0.135 Sum_probs=88.5
Q ss_pred CCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH
Q 011291 141 GFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 220 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~ 220 (489)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|+.+ ...+++++++|+.+++++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~--~~~vi~~D~~G~G~S~~~----------------~~~~~~~~~~~l~~~l~~ 62 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P--DYPRLYIDLPGHGGSAAI----------------SVDGFADVSRLLSQTLQS 62 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C--CCCEEEecCCCCCCCCCc----------------cccCHHHHHHHHHHHHHH
Confidence 478999999999999999999988 3 599999999999999753 224889999999999999
Q ss_pred hcCceEEEEEeCcchHHHHHHhhhhhh-HHHhHHhhccc
Q 011291 221 LAAEKAILVGHSAGALVAVNSYFEAPE-RVAALILIAPA 258 (489)
Q Consensus 221 l~~~~v~liGhS~Gg~ial~~a~~~p~-~v~~lvl~~~~ 258 (489)
++.++++++||||||.+++.+|.++|+ +|++++++++.
T Consensus 63 ~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 63 YNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 999999999999999999999999865 49999988765
No 33
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=9.6e-27 Score=225.30 Aligned_cols=136 Identities=18% Similarity=0.259 Sum_probs=100.7
Q ss_pred eecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc-------------hHHhhH---HhHhh
Q 011291 104 EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS-------------WNRAMK---PLAKT 167 (489)
Q Consensus 104 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~-------------~~~~~~---~L~~~ 167 (489)
.++|.+++|..+|..+ .+.+|+|||+||++++... |..++. .|..+
T Consensus 29 ~~~~~~~~y~~~G~~~------------------~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~ 90 (379)
T PRK00175 29 VLPPVELAYETYGTLN------------------ADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTD 90 (379)
T ss_pred CcCCceEEEEeccccC------------------CCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCcc
Confidence 4578899999998541 1236899999999999874 556552 34333
Q ss_pred CCCeEEEeCCCCC-CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCce-EEEEEeCcchHHHHHHhhhh
Q 011291 168 TSSKVLAFDRPAF-GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEK-AILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 168 ~G~~Vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~-v~liGhS~Gg~ial~~a~~~ 245 (489)
+|+||++|++|+ |.|+.+.... +............++++++++++.++++++++++ ++++||||||++++.+|.++
T Consensus 91 -~~~vi~~Dl~G~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 168 (379)
T PRK00175 91 -RYFVICSNVLGGCKGSTGPSSIN-PDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDY 168 (379)
T ss_pred -ceEEEeccCCCCCCCCCCCCCCC-CCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhC
Confidence 799999999983 5554332110 0000000011236899999999999999999999 58999999999999999999
Q ss_pred hhHHHhHHhhcccc
Q 011291 246 PERVAALILIAPAI 259 (489)
Q Consensus 246 p~~v~~lvl~~~~~ 259 (489)
|++|+++|++++..
T Consensus 169 p~~v~~lvl~~~~~ 182 (379)
T PRK00175 169 PDRVRSALVIASSA 182 (379)
T ss_pred hHhhhEEEEECCCc
Confidence 99999999999764
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=3.8e-26 Score=221.88 Aligned_cols=110 Identities=29% Similarity=0.326 Sum_probs=89.0
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
+++|+|||+||++++...|...+..|.+ +|+|+++|+||||.|+++.... .......+.+++++.+++
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~~----------~~~~~~~~~~~~~i~~~~ 170 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALAS--RFRVIAIDQLGWGGSSRPDFTC----------KSTEETEAWFIDSFEEWR 170 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHh--CCEEEEECCCCCCCCCCCCccc----------ccHHHHHHHHHHHHHHHH
Confidence 3578999999999999899888888876 4999999999999998642110 000011223567788888
Q ss_pred HHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 219 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 219 ~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
+.++.++++|+||||||++++.+|.++|++|+++|++++...
T Consensus 171 ~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~ 212 (402)
T PLN02894 171 KAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGF 212 (402)
T ss_pred HHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccc
Confidence 888999999999999999999999999999999999987654
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.95 E-value=2.4e-26 Score=223.98 Aligned_cols=261 Identities=31% Similarity=0.491 Sum_probs=169.7
Q ss_pred CCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCC
Q 011291 99 DSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRP 178 (489)
Q Consensus 99 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~ 178 (489)
.......++..++|..+++. ++++|||+||++++...|..+...|.+ +|+|+++|+|
T Consensus 110 ~~~~~~~~~~~i~~~~~g~~---------------------~~~~vl~~HG~~~~~~~~~~~~~~l~~--~~~v~~~d~~ 166 (371)
T PRK14875 110 APRKARIGGRTVRYLRLGEG---------------------DGTPVVLIHGFGGDLNNWLFNHAALAA--GRPVIALDLP 166 (371)
T ss_pred CCCcceEcCcEEEEecccCC---------------------CCCeEEEECCCCCccchHHHHHHHHhc--CCEEEEEcCC
Confidence 33456678888999887654 468999999999999999999998876 4999999999
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccc
Q 011291 179 AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 258 (489)
Q Consensus 179 G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~ 258 (489)
|||.|... ....++.++++++..+++.++.++++++|||+||.+++.+|..+|++++++|++++.
T Consensus 167 g~G~s~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 167 GHGASSKA---------------VGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred CCCCCCCC---------------CCCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 99999632 234689999999999999999999999999999999999999999999999999876
Q ss_pred ccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhcc
Q 011291 259 ILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSA 338 (489)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (489)
...+... ..+...+..... ...+....... ..
T Consensus 232 ~~~~~~~--------------------------~~~~~~~~~~~~----------------~~~~~~~~~~~----~~-- 263 (371)
T PRK14875 232 GLGPEIN--------------------------GDYIDGFVAAES----------------RRELKPVLELL----FA-- 263 (371)
T ss_pred CcCcccc--------------------------hhHHHHhhcccc----------------hhHHHHHHHHH----hc--
Confidence 4322100 000000000000 00000000000 00
Q ss_pred ccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEE
Q 011291 339 VGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVL 418 (489)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 418 (489)
.+..+.......+............+.......+.. .....+....+.+++||+|
T Consensus 264 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~i~~Pvl 318 (371)
T PRK14875 264 -----------------------DPALVTRQMVEDLLKYKRLDGVDDALRALADALFAG--GRQRVDLRDRLASLAIPVL 318 (371)
T ss_pred -----------------------ChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccC--cccchhHHHHHhcCCCCEE
Confidence 000000000000000000000011111111111000 0111245556788999999
Q ss_pred EEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHHH
Q 011291 419 IVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQR 473 (489)
Q Consensus 419 ii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~ 473 (489)
+++|++|.++|++..+.+ ..+.++.+++++||++++++|+++.+.|.+||++
T Consensus 319 ii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 319 VIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred EEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 999999999998766544 3468999999999999999999999999999975
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=2e-25 Score=210.67 Aligned_cols=123 Identities=19% Similarity=0.183 Sum_probs=99.6
Q ss_pred ceeee-cceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCC
Q 011291 101 CFCEF-NGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPA 179 (489)
Q Consensus 101 ~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G 179 (489)
.++.. +|.+++|..+|++ ++++|||+||++++...+ .+...+... +|+|+++|+||
T Consensus 7 ~~~~~~~~~~l~y~~~g~~---------------------~~~~lvllHG~~~~~~~~-~~~~~~~~~-~~~vi~~D~~G 63 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNP---------------------DGKPVVFLHGGPGSGTDP-GCRRFFDPE-TYRIVLFDQRG 63 (306)
T ss_pred CeEEcCCCcEEEEEECcCC---------------------CCCEEEEECCCCCCCCCH-HHHhccCcc-CCEEEEECCCC
Confidence 44443 6789999988754 367899999988776543 334445444 79999999999
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 180 FGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 180 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
||.|+.+.. ...++.+++++|+..+++++++++++++||||||++++.++.++|++|+++|++++..
T Consensus 64 ~G~S~~~~~-------------~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 64 CGKSTPHAC-------------LEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred CCCCCCCCC-------------cccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 999974321 1346788999999999999999999999999999999999999999999999998764
No 37
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.94 E-value=1e-25 Score=208.16 Aligned_cols=106 Identities=23% Similarity=0.362 Sum_probs=93.6
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
+++|+|||+||++.+...|..+...|.++ ||+|+++|+||||.|... ....++++++++++.+++
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~-g~~vi~~dl~g~G~s~~~--------------~~~~~~~~~~~~~l~~~i 80 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENS-GYKVTCIDLKSAGIDQSD--------------ADSVTTFDEYNKPLIDFL 80 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhC-CCEEEEecccCCCCCCCC--------------cccCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999885 999999999999987532 123479999999999999
Q ss_pred HHhc-CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 219 DILA-AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 219 ~~l~-~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
+++. .++++|+||||||++++.++.++|++|+++|++++..
T Consensus 81 ~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 81 SSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATM 122 (273)
T ss_pred HhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEecccc
Confidence 9985 5899999999999999999999999999999997753
No 38
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.94 E-value=2.5e-25 Score=205.99 Aligned_cols=273 Identities=23% Similarity=0.296 Sum_probs=177.7
Q ss_pred CCCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeC
Q 011291 97 DPDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFD 176 (489)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D 176 (489)
..+..+...+|..++|..+.+++ ....+||++||++.+...|..++..|... ||.|+++|
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~-------------------~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~-G~~V~~~D 68 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPE-------------------PPKGVVVLVHGLGEHSGRYEELADDLAAR-GFDVYALD 68 (298)
T ss_pred cccceeecCCCceEEEEeecCCC-------------------CCCcEEEEecCchHHHHHHHHHHHHHHhC-CCEEEEec
Confidence 44567778899999999998762 22268999999999999999999999996 99999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc----CceEEEEEeCcchHHHHHHhhhhhhHHHhH
Q 011291 177 RPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA----AEKAILVGHSAGALVAVNSYFEAPERVAAL 252 (489)
Q Consensus 177 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~----~~~v~liGhS~Gg~ial~~a~~~p~~v~~l 252 (489)
+||||.|.+. ......++.++..|+..+++... ..+++++||||||.|++.++.+++.+|+++
T Consensus 69 ~RGhG~S~r~-------------~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~ 135 (298)
T COG2267 69 LRGHGRSPRG-------------QRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGL 135 (298)
T ss_pred CCCCCCCCCC-------------CcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEE
Confidence 9999999741 12234458999999999998875 368999999999999999999999999999
Q ss_pred HhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 011291 253 ILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLS 332 (489)
Q Consensus 253 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (489)
|+.+|...... ............ ..+.........
T Consensus 136 vLssP~~~l~~------------------------------~~~~~~~~~~~~---------------~~~~~~~p~~~~ 170 (298)
T COG2267 136 VLSSPALGLGG------------------------------AILRLILARLAL---------------KLLGRIRPKLPV 170 (298)
T ss_pred EEECccccCCh------------------------------hHHHHHHHHHhc---------------cccccccccccc
Confidence 99999864431 000000000000 000000000000
Q ss_pred hhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcC-cc-----cccchhhHHHHHHHHHhcCCcCCCCchh
Q 011291 333 ATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTK-PL-----RVKGWDRALVEFTAALLIDNESKMNPPL 406 (489)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (489)
.. . ........ +.. . .....+.|.. +. ....|...+..... ...
T Consensus 171 ~~-~-~~~~~~~~--------------~~s--r-~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~-----------~~~ 220 (298)
T COG2267 171 DS-N-LLEGVLTD--------------DLS--R-DPAEVAAYEADPLIGVGGPVSRWVDLALLAGR-----------VPA 220 (298)
T ss_pred Cc-c-cccCcCcc--------------hhh--c-CHHHHHHHhcCCccccCCccHHHHHHHHHhhc-----------ccc
Confidence 00 0 00000000 000 0 0111111111 11 11122222211110 112
Q ss_pred hhhcccCCccEEEEecCCCCCCC-chhHHHHHhhC--CCCEEEEecCCCCCCcccc-H--HHHHHHHHHHHHHhhCC
Q 011291 407 AKRLHEISCPVLIVTGDTDRIVP-SWNAERLSRAI--PGSTFEVIKNCGHVPQEEK-V--EEFVSIVARFLQRAFGY 477 (489)
Q Consensus 407 ~~~l~~i~~PvLii~G~~D~~vp-~~~~~~l~~~~--~~~~~~~i~g~gH~~~~e~-p--~~v~~~i~~fl~~~~~~ 477 (489)
......+++|||+++|++|.+++ .+...++.+.. +++++++++|+.|.++.|. . +++.+.+.+|+++....
T Consensus 221 ~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 221 LRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred hhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhccC
Confidence 33456789999999999999999 67666666655 5689999999999998874 4 78999999999887653
No 39
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.94 E-value=5.1e-26 Score=208.45 Aligned_cols=249 Identities=23% Similarity=0.293 Sum_probs=156.1
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHH-HHHHHHH
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA-TLYFIDI 220 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-l~~~l~~ 220 (489)
|+||++||++++...|..+++.|+ + ||+|+++|+||||.|+.+. ....+++++.+++ +..+++.
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~-~~~v~~~d~~g~G~s~~~~-------------~~~~~~~~~~~~~~~~~~~~~ 66 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-P-HFRCLAIDLPGHGSSQSPD-------------EIERYDFEEAAQDILATLLDQ 66 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-c-cCeEEEEcCCCCCCCCCCC-------------ccChhhHHHHHHHHHHHHHHH
Confidence 689999999999999999999998 4 8999999999999997532 2245788999999 7788899
Q ss_pred hcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHH
Q 011291 221 LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTI 300 (489)
Q Consensus 221 l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (489)
++.++++++|||+||.+++.+|.++|+.|++++++++....... ......+..
T Consensus 67 ~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~---------------------------~~~~~~~~~ 119 (251)
T TIGR03695 67 LGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATE---------------------------EERAARRQN 119 (251)
T ss_pred cCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCch---------------------------Hhhhhhhhc
Confidence 98899999999999999999999999999999999875322100 000000000
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccc
Q 011291 301 LSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRV 380 (489)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
..... ..+.. .........+.... .+. . . .... ..............
T Consensus 120 ~~~~~----~~~~~--~~~~~~~~~~~~~~---~~~----~--------~--------~~~~-~~~~~~~~~~~~~~--- 166 (251)
T TIGR03695 120 DEQLA----QRFEQ--EGLEAFLDDWYQQP---LFA----S--------Q--------KNLP-PEQRQALRAKRLAN--- 166 (251)
T ss_pred chhhh----hHHHh--cCccHHHHHHhcCc---eee----e--------c--------ccCC-hHHhHHHHHhcccc---
Confidence 00000 00000 00000000000000 000 0 0 0000 00000000000000
Q ss_pred cchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccH
Q 011291 381 KGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKV 460 (489)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p 460 (489)
....+........ .....+....+.++++|+++++|++|..++ ...+.+.+..+++++++++++||++++++|
T Consensus 167 --~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~ 239 (251)
T TIGR03695 167 --NPEGLAKMLRATG----LGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENP 239 (251)
T ss_pred --cchHHHHHHHHhh----hhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccCh
Confidence 0001111100000 001123445677899999999999998774 567778888899999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011291 461 EEFVSIVARFLQ 472 (489)
Q Consensus 461 ~~v~~~i~~fl~ 472 (489)
+++.+.|.+||+
T Consensus 240 ~~~~~~i~~~l~ 251 (251)
T TIGR03695 240 EAFAKILLAFLE 251 (251)
T ss_pred HHHHHHHHHHhC
Confidence 999999999983
No 40
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=2.8e-25 Score=194.69 Aligned_cols=269 Identities=23% Similarity=0.282 Sum_probs=179.2
Q ss_pred CCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCc-cchHHhhHHhHhhCCCeEEEeCC
Q 011291 99 DSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASV-FSWNRAMKPLAKTTSSKVLAFDR 177 (489)
Q Consensus 99 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~-~~~~~~~~~L~~~~G~~Vi~~D~ 177 (489)
...+.+.+|..+++..|.|.+ +....-.|+++||++... ..|..++..|+.. ||.|+++|+
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~-----------------~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~-g~~v~a~D~ 90 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLS-----------------GTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKS-GFAVYAIDY 90 (313)
T ss_pred eeeEEcCCCCEeEEEecccCC-----------------CCCCceEEEEEcCCcccchhhHHHHHHHHHhC-CCeEEEeec
Confidence 345566789999999998862 012334689999999876 6788899999996 999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc------CceEEEEEeCcchHHHHHHhhhhhhHHHh
Q 011291 178 PAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA------AEKAILVGHSAGALVAVNSYFEAPERVAA 251 (489)
Q Consensus 178 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~------~~~v~liGhS~Gg~ial~~a~~~p~~v~~ 251 (489)
+|||.|++. ....-+++..++|+..+.+.+. ..+.+++||||||.+++.++.++|+..++
T Consensus 91 ~GhG~SdGl--------------~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G 156 (313)
T KOG1455|consen 91 EGHGRSDGL--------------HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDG 156 (313)
T ss_pred cCCCcCCCC--------------cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCccccc
Confidence 999999853 3456788999999998888642 24799999999999999999999999999
Q ss_pred HHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 011291 252 LILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVL 331 (489)
Q Consensus 252 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (489)
+|+++|........ .+..-....+..+...++ ++
T Consensus 157 ~ilvaPmc~i~~~~--------------------------kp~p~v~~~l~~l~~liP-------------------~w- 190 (313)
T KOG1455|consen 157 AILVAPMCKISEDT--------------------------KPHPPVISILTLLSKLIP-------------------TW- 190 (313)
T ss_pred ceeeecccccCCcc--------------------------CCCcHHHHHHHHHHHhCC-------------------ce-
Confidence 99999986433211 000000000000000000 00
Q ss_pred hhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhh--HHHHHHHHHhcCCcCCCCchhhhh
Q 011291 332 SATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDR--ALVEFTAALLIDNESKMNPPLAKR 409 (489)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 409 (489)
....... . ......++ ......+..+....+..+ ...+..+. ..++...
T Consensus 191 ---k~vp~~d-----~--------~~~~~kdp----~~r~~~~~npl~y~g~pRl~T~~ElLr~---------~~~le~~ 241 (313)
T KOG1455|consen 191 ---KIVPTKD-----I--------IDVAFKDP----EKRKILRSDPLCYTGKPRLKTAYELLRV---------TADLEKN 241 (313)
T ss_pred ---eecCCcc-----c--------cccccCCH----HHHHHhhcCCceecCCccHHHHHHHHHH---------HHHHHHh
Confidence 0000000 0 00000011 111112222332222211 11111111 1256788
Q ss_pred cccCCccEEEEecCCCCCCCchhHHHHHhhCC--CCEEEEecCCCCCCcc----ccHHHHHHHHHHHHHHh
Q 011291 410 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQE----EKVEEFVSIVARFLQRA 474 (489)
Q Consensus 410 l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~--~~~~~~i~g~gH~~~~----e~p~~v~~~i~~fl~~~ 474 (489)
+.++++|.+++||+.|.++.++.++.+++..+ +.++.+|||+-|.++. |+.+.|...|.+||+++
T Consensus 242 l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 242 LNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999874 6899999999998774 45688999999999875
No 41
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=1.3e-24 Score=208.12 Aligned_cols=314 Identities=13% Similarity=0.107 Sum_probs=176.1
Q ss_pred ecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCcc-------------chHHhhH---HhHhhC
Q 011291 105 FNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVF-------------SWNRAMK---PLAKTT 168 (489)
Q Consensus 105 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~-------------~~~~~~~---~L~~~~ 168 (489)
++..+|+|..||..| ..+.+.||++|++.+++. .|..++- .|-.+
T Consensus 38 l~~~~~~Y~t~G~ln------------------~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~- 98 (389)
T PRK06765 38 IPDVQMGYETYGTLN------------------RAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTN- 98 (389)
T ss_pred cCCceEEEEeccccC------------------CCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCC-
Confidence 467889999999863 224578999999988542 2655542 23333
Q ss_pred CCeEEEeCCCCCCCCCCC------CCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEE-EEEeCcchHHHHHH
Q 011291 169 SSKVLAFDRPAFGLTSRV------FPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAI-LVGHSAGALVAVNS 241 (489)
Q Consensus 169 G~~Vi~~D~~G~G~S~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~-liGhS~Gg~ial~~ 241 (489)
.|.||++|..|-|.|..| +....|............+++.++++++..+++++++++++ ++||||||++++.+
T Consensus 99 ~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~ 178 (389)
T PRK06765 99 KYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEW 178 (389)
T ss_pred ceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHH
Confidence 599999999998875432 11112222222233456699999999999999999999997 99999999999999
Q ss_pred hhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 011291 242 YFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMAD 321 (489)
Q Consensus 242 a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
|.++|++|+++|++++......... ..+...+.......+.+..--.........
T Consensus 179 a~~~P~~v~~lv~ia~~~~~~~~~~-------------------------~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~ 233 (389)
T PRK06765 179 AVHYPHMVERMIGVIGNPQNDAWTS-------------------------VNVLQNWAEAIRLDPNWKGGKYYGEEQPMK 233 (389)
T ss_pred HHHChHhhheEEEEecCCCCChhHH-------------------------HHHHHHHHHHHHhCCCCCCCCCCCCCCchH
Confidence 9999999999999987643221000 000000000000000000000000000000
Q ss_pred HHHHHHHHHHhhhhhccccchhhhhhHhhhhhHH---HH-----HhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHH
Q 011291 322 MLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAA---VR-----RAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAA 393 (489)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (489)
-+. ...+...... ....++...+.... .. ...+..+.+.....+.+...... ..+......
T Consensus 234 Gl~-~a~~~~~~~~------~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Da----n~~l~l~~a 302 (389)
T PRK06765 234 GLT-LALRMMTMNA------FDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDA----NHWLYLAKA 302 (389)
T ss_pred HHH-HHHHHHHHHc------CCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccCh----hhHHHHHHH
Confidence 000 0000000000 00000000000000 00 00000011111111111111111 111111111
Q ss_pred HhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCC----CCEEEEecC-CCCCCccccHHHHHHHHH
Q 011291 394 LLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKN-CGHVPQEEKVEEFVSIVA 468 (489)
Q Consensus 394 ~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~----~~~~~~i~g-~gH~~~~e~p~~v~~~i~ 468 (489)
+..........+..+.+.+|++|+|+|+|++|.++|++..+.+.+.++ +++++++++ +||+.++++|+++++.|.
T Consensus 303 ~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~ 382 (389)
T PRK06765 303 VQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIY 382 (389)
T ss_pred HHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHH
Confidence 111111111225677899999999999999999999999999999886 689999985 899999999999999999
Q ss_pred HHHHH
Q 011291 469 RFLQR 473 (489)
Q Consensus 469 ~fl~~ 473 (489)
+||++
T Consensus 383 ~FL~~ 387 (389)
T PRK06765 383 EFLNR 387 (389)
T ss_pred HHHcc
Confidence 99975
No 42
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.93 E-value=1.4e-25 Score=182.74 Aligned_cols=255 Identities=18% Similarity=0.212 Sum_probs=177.6
Q ss_pred CCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCC-ccchHHhhHHhHhhCCCeEEEeC
Q 011291 98 PDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGAS-VFSWNRAMKPLAKTTSSKVLAFD 176 (489)
Q Consensus 98 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~-~~~~~~~~~~L~~~~G~~Vi~~D 176 (489)
....-+.++|.+|+|..+|.. ...||++.|.-++ ..+|.+.+..|....-+.|+++|
T Consensus 21 ~te~kv~vng~ql~y~~~G~G----------------------~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawD 78 (277)
T KOG2984|consen 21 YTESKVHVNGTQLGYCKYGHG----------------------PNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWD 78 (277)
T ss_pred hhhheeeecCceeeeeecCCC----------------------CceeEecccccccccccCCHHHHhcCCCCceEEEEEC
Confidence 334556789999999998754 2358888887554 46688888877765458999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhc
Q 011291 177 RPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIA 256 (489)
Q Consensus 177 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~ 256 (489)
.||||.|.+|... .+...+...+++..++++.|+.+++.++|||=||..++..|+++++.|..+|+.+
T Consensus 79 PpGYG~SrPP~Rk------------f~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwg 146 (277)
T KOG2984|consen 79 PPGYGTSRPPERK------------FEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWG 146 (277)
T ss_pred CCCCCCCCCCccc------------chHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeec
Confidence 9999999876533 3455566777778889999999999999999999999999999999999999998
Q ss_pred ccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 011291 257 PAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLR 336 (489)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (489)
+...... .-...++.+.....|....
T Consensus 147 a~ayvn~-----------------------------~~~ma~kgiRdv~kWs~r~------------------------- 172 (277)
T KOG2984|consen 147 AAAYVNH-----------------------------LGAMAFKGIRDVNKWSARG------------------------- 172 (277)
T ss_pred ccceecc-----------------------------hhHHHHhchHHHhhhhhhh-------------------------
Confidence 7653321 1111111122221111100
Q ss_pred ccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCcc
Q 011291 337 SAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCP 416 (489)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 416 (489)
...+.+.++...++..|.. |......+... .+..-....+.+++||
T Consensus 173 -------R~P~e~~Yg~e~f~~~wa~--------------------wvD~v~qf~~~-------~dG~fCr~~lp~vkcP 218 (277)
T KOG2984|consen 173 -------RQPYEDHYGPETFRTQWAA--------------------WVDVVDQFHSF-------CDGRFCRLVLPQVKCP 218 (277)
T ss_pred -------cchHHHhcCHHHHHHHHHH--------------------HHHHHHHHhhc-------CCCchHhhhcccccCC
Confidence 0001111222222221111 11111111000 0111244568899999
Q ss_pred EEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHHHh
Q 011291 417 VLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 474 (489)
Q Consensus 417 vLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~ 474 (489)
+||++|++|++++...+..+....+.+++.++|.++|.+++..+++|++.+.+||+..
T Consensus 219 tli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 219 TLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred eeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999864
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.93 E-value=3.1e-24 Score=221.94 Aligned_cols=121 Identities=21% Similarity=0.274 Sum_probs=99.1
Q ss_pred CceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCC
Q 011291 100 SCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPA 179 (489)
Q Consensus 100 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G 179 (489)
..++..+|.+|+|..++++ ++|+|||+||++++...|..+++.|.+ ||+|+++|+||
T Consensus 5 ~~~~~~~g~~l~~~~~g~~---------------------~~~~ivllHG~~~~~~~w~~~~~~L~~--~~~Vi~~D~~G 61 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP---------------------DRPTVVLVHGYPDNHEVWDGVAPLLAD--RFRVVAYDVRG 61 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC---------------------CCCeEEEEcCCCchHHHHHHHHHHhhc--ceEEEEecCCC
Confidence 4556789999999998754 468999999999999999999999943 79999999999
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCce-EEEEEeCcchHHHHHHhhh--hhhHHHhHHhhc
Q 011291 180 FGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEK-AILVGHSAGALVAVNSYFE--APERVAALILIA 256 (489)
Q Consensus 180 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~-v~liGhS~Gg~ial~~a~~--~p~~v~~lvl~~ 256 (489)
||.|+++. ....++++++++|+..++++++.++ ++|+||||||.+++.++.+ .++++..++.++
T Consensus 62 ~G~S~~~~-------------~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 62 AGRSSAPK-------------RTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred CCCCCCCC-------------cccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 99998543 2246899999999999999998765 9999999999999887765 234444444443
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.92 E-value=4.6e-24 Score=237.71 Aligned_cols=261 Identities=20% Similarity=0.257 Sum_probs=162.0
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
.+++|||+||++++...|..++..|.+ +|+|+++|+||||.|....... .......++++++++++..+++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~-------~~~~~~~~si~~~a~~l~~ll~ 1440 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG--SARCISIDLPGHGGSKIQNHAK-------ETQTEPTLSVELVADLLYKLIE 1440 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC--CCEEEEEcCCCCCCCCCccccc-------cccccccCCHHHHHHHHHHHHH
Confidence 468999999999999999999999976 4999999999999997542110 0011235789999999999999
Q ss_pred HhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHH
Q 011291 220 ILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYT 299 (489)
Q Consensus 220 ~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (489)
+++.++++|+||||||.+++.++.++|++|+++|++++...... ..... ..
T Consensus 1441 ~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~----------------------------~~~~~-~~ 1491 (1655)
T PLN02980 1441 HITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKD----------------------------EVARK-IR 1491 (1655)
T ss_pred HhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCc----------------------------hHHHH-HH
Confidence 99999999999999999999999999999999999986421110 00000 00
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCccc
Q 011291 300 ILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLR 379 (489)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (489)
.. ........+. ..........++.... .........+.......... ..
T Consensus 1492 ~~--~~~~~~~~l~--~~g~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~-~~ 1541 (1655)
T PLN02980 1492 SA--KDDSRARMLI--DHGLEIFLENWYSGEL-------------------------WKSLRNHPHFNKIVASRLLH-KD 1541 (1655)
T ss_pred hh--hhhHHHHHHH--hhhHHHHHHHhccHHH-------------------------hhhhccCHHHHHHHHHHHhc-CC
Confidence 00 0000000000 0000000000000000 00000000000000000000 00
Q ss_pred ccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCC------------CEEEE
Q 011291 380 VKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG------------STFEV 447 (489)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~------------~~~~~ 447 (489)
...+......+. .....+....+.++++|+|+|+|++|..++ ..++.+.+.+++ +++++
T Consensus 1542 ----~~~~~~~l~~~~----~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvv 1612 (1655)
T PLN02980 1542 ----VPSLAKLLSDLS----IGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVE 1612 (1655)
T ss_pred ----HHHHHHHHHHhh----hcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEE
Confidence 000111111000 001124556789999999999999999875 567778877765 48999
Q ss_pred ecCCCCCCccccHHHHHHHHHHHHHHhhCC
Q 011291 448 IKNCGHVPQEEKVEEFVSIVARFLQRAFGY 477 (489)
Q Consensus 448 i~g~gH~~~~e~p~~v~~~i~~fl~~~~~~ 477 (489)
++++||++++|+|+++++.|.+||++....
T Consensus 1613 I~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1613 IPNCGHAVHLENPLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred ECCCCCchHHHCHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999986543
No 45
>PLN02511 hydrolase
Probab=99.92 E-value=1e-24 Score=211.02 Aligned_cols=255 Identities=15% Similarity=0.191 Sum_probs=147.0
Q ss_pred CCCcEEEEccCCCCccc-h-HHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFS-W-NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~-~-~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
.+|+||++||+++++.. | ..++..+.++ ||+|+++|+||||.|.... ..+.....++|+.++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~-g~~vv~~d~rG~G~s~~~~---------------~~~~~~~~~~Dl~~~ 162 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSK-GWRVVVFNSRGCADSPVTT---------------PQFYSASFTGDLRQV 162 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHC-CCEEEEEecCCCCCCCCCC---------------cCEEcCCchHHHHHH
Confidence 46889999999877644 4 4566667675 9999999999999997421 112234566778888
Q ss_pred HHHhcC----ceEEEEEeCcchHHHHHHhhhhhhH--HHhHHhhcccccCccccccccccCCCCCcccccccccccccch
Q 011291 218 IDILAA----EKAILVGHSAGALVAVNSYFEAPER--VAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLL 291 (489)
Q Consensus 218 l~~l~~----~~v~liGhS~Gg~ial~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (489)
+++++. .+++++||||||.+++.++.++|++ |.++++++++.......
T Consensus 163 i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~-------------------------- 216 (388)
T PLN02511 163 VDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIAD-------------------------- 216 (388)
T ss_pred HHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHH--------------------------
Confidence 877754 5899999999999999999999987 78877776543210000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHH
Q 011291 292 KPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVI 371 (489)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (489)
..+...+. ..+...+...+ ..........+... .. .+....... ...-..+.+
T Consensus 217 ~~~~~~~~--~~y~~~~~~~l----~~~~~~~~~~~~~~-----~~------------~~~~~~~~~-~~~~~~fd~--- 269 (388)
T PLN02511 217 EDFHKGFN--NVYDKALAKAL----RKIFAKHALLFEGL-----GG------------EYNIPLVAN-AKTVRDFDD--- 269 (388)
T ss_pred HHHhccHH--HHHHHHHHHHH----HHHHHHHHHHHhhC-----CC------------ccCHHHHHh-CCCHHHHHH---
Confidence 00000000 00000000000 00000000000000 00 000000000 000000110
Q ss_pred hhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhH-HHHHhhCCCCEEEEecC
Q 011291 372 EGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNA-ERLSRAIPGSTFEVIKN 450 (489)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~-~~l~~~~~~~~~~~i~g 450 (489)
.+.... .++. ....++ ...+....+.+|++|+|+|+|++|+++|.+.. ..+.+..++++++++++
T Consensus 270 -~~t~~~--~gf~-~~~~yy----------~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~ 335 (388)
T PLN02511 270 -GLTRVS--FGFK-SVDAYY----------SNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPS 335 (388)
T ss_pred -hhhhhc--CCCC-CHHHHH----------HHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCC
Confidence 000000 0000 000000 01134567889999999999999999997754 45667789999999999
Q ss_pred CCCCCccccHHH------HHHHHHHHHHHhhCC
Q 011291 451 CGHVPQEEKVEE------FVSIVARFLQRAFGY 477 (489)
Q Consensus 451 ~gH~~~~e~p~~------v~~~i~~fl~~~~~~ 477 (489)
+||+.++|.|+. +.+.|.+||+.....
T Consensus 336 gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 336 GGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred cceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 999999999865 589999999887543
No 46
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=5e-24 Score=177.38 Aligned_cols=221 Identities=17% Similarity=0.238 Sum_probs=153.7
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 221 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l 221 (489)
..||||||+.|+..+.+.+.+.|.++ ||.|++|.+||||.... ..-..+..+|.+++.+.-++|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~-GyTv~aP~ypGHG~~~e---------------~fl~t~~~DW~~~v~d~Y~~L 79 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNEN-GYTVYAPRYPGHGTLPE---------------DFLKTTPRDWWEDVEDGYRDL 79 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHC-CceEecCCCCCCCCCHH---------------HHhcCCHHHHHHHHHHHHHHH
Confidence 78999999999999999999999997 99999999999998852 334567777777776655554
Q ss_pred ---cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHH
Q 011291 222 ---AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVY 298 (489)
Q Consensus 222 ---~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (489)
+.+.|.++|.||||.+++.+|..+| ++++|.++++...... ....
T Consensus 80 ~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~------------------------------~~ii 127 (243)
T COG1647 80 KEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSW------------------------------RIII 127 (243)
T ss_pred HHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccc------------------------------hhhh
Confidence 6789999999999999999999998 9999999987542210 0000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcC-c
Q 011291 299 TILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTK-P 377 (489)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 377 (489)
..+..+. +...... ..+.+.+.+++ ..+.. +
T Consensus 128 ---e~~l~y~-~~~kk~e-------------------------------------------~k~~e~~~~e~-~~~~~~~ 159 (243)
T COG1647 128 ---EGLLEYF-RNAKKYE-------------------------------------------GKDQEQIDKEM-KSYKDTP 159 (243)
T ss_pred ---HHHHHHH-HHhhhcc-------------------------------------------CCCHHHHHHHH-HHhhcch
Confidence 0000000 0000000 00111111111 11110 0
Q ss_pred ccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCC--CCEEEEecCCCCCC
Q 011291 378 LRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVP 455 (489)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~--~~~~~~i~g~gH~~ 455 (489)
.. -...+.... .+....+..|..|+++++|++|+++|.+.+..+...+- +.++.+++++||.+
T Consensus 160 ~~---~~~~~~~~i------------~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVI 224 (243)
T COG1647 160 MT---TTAQLKKLI------------KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVI 224 (243)
T ss_pred HH---HHHHHHHHH------------HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCcee
Confidence 00 011111111 14566788999999999999999999999999998873 46899999999988
Q ss_pred ccc-cHHHHHHHHHHHHHH
Q 011291 456 QEE-KVEEFVSIVARFLQR 473 (489)
Q Consensus 456 ~~e-~p~~v~~~i~~fl~~ 473 (489)
..+ ..+++.+.|..||+.
T Consensus 225 t~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 225 TLDKERDQVEEDVITFLEK 243 (243)
T ss_pred ecchhHHHHHHHHHHHhhC
Confidence 775 578999999999963
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=9.7e-24 Score=188.54 Aligned_cols=251 Identities=20% Similarity=0.299 Sum_probs=163.1
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
...|+++++||+.++...|+.+...|+...|..|+++|.|.||.|... ..++...+++|+..++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~----------------~~h~~~~ma~dv~~Fi 113 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI----------------TVHNYEAMAEDVKLFI 113 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccc----------------cccCHHHHHHHHHHHH
Confidence 467999999999999999999999999988999999999999999853 4567999999999999
Q ss_pred HHhc----CceEEEEEeCcch-HHHHHHhhhhhhHHHhHHhhccccc-CccccccccccCCCCCcccccccccccccchh
Q 011291 219 DILA----AEKAILVGHSAGA-LVAVNSYFEAPERVAALILIAPAIL-APRLIQKVDEANPLGRNEQTERDTSNLVNLLK 292 (489)
Q Consensus 219 ~~l~----~~~v~liGhS~Gg-~ial~~a~~~p~~v~~lvl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (489)
+..+ ..+++|+|||||| .+++..+..+|+.+..+|+++-... .+.. ..
T Consensus 114 ~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~--------------------------~~ 167 (315)
T KOG2382|consen 114 DGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRS--------------------------YG 167 (315)
T ss_pred HHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcc--------------------------cc
Confidence 9985 5799999999999 7777777888999999888764321 1100 02
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHh
Q 011291 293 PFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIE 372 (489)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (489)
.....+..+......... ..+..+....+..... +..+...+..
T Consensus 168 e~~e~i~~m~~~d~~~~~-----~~~rke~~~~l~~~~~-------------------------------d~~~~~fi~~ 211 (315)
T KOG2382|consen 168 EYRELIKAMIQLDLSIGV-----SRGRKEALKSLIEVGF-------------------------------DNLVRQFILT 211 (315)
T ss_pred hHHHHHHHHHhccccccc-----cccHHHHHHHHHHHhc-------------------------------chHHHHHHHH
Confidence 222222222222111000 0000001110000000 0000011111
Q ss_pred hhc--Ccccccch---hhHHHHHHHHHhcCCcCCCCchhhhhc--ccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEE
Q 011291 373 GYT--KPLRVKGW---DRALVEFTAALLIDNESKMNPPLAKRL--HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTF 445 (489)
Q Consensus 373 ~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~ 445 (489)
++. .......| ...+........ ...+...+ ...+.|||++.|.++..++.+.-..+.+.+|++++
T Consensus 212 nl~~~~~~~s~~w~~nl~~i~~~~~~~~-------~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~ 284 (315)
T KOG2382|consen 212 NLKKSPSDGSFLWRVNLDSIASLLDEYE-------ILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEV 284 (315)
T ss_pred hcCcCCCCCceEEEeCHHHHHHHHHHHH-------hhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccchhe
Confidence 111 00000001 111111111100 00111222 56689999999999999999999999999999999
Q ss_pred EEecCCCCCCccccHHHHHHHHHHHHHHh
Q 011291 446 EVIKNCGHVPQEEKVEEFVSIVARFLQRA 474 (489)
Q Consensus 446 ~~i~g~gH~~~~e~p~~v~~~i~~fl~~~ 474 (489)
+.++++|||++.|+|+++.+.|.+|+.++
T Consensus 285 ~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 285 HELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred eecccCCceeecCCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999764
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.90 E-value=1.1e-22 Score=193.02 Aligned_cols=125 Identities=14% Similarity=0.157 Sum_probs=95.7
Q ss_pred eeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCcc-ch------------------------
Q 011291 103 CEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVF-SW------------------------ 157 (489)
Q Consensus 103 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~-~~------------------------ 157 (489)
.+.+|..|+++.|.+++ .+.+|+++||++.+.. .|
T Consensus 3 ~~~~g~~l~~~~~~~~~--------------------~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y 62 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKN--------------------AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIY 62 (332)
T ss_pred cCCCCCeEEEeeeeccC--------------------CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEe
Confidence 34588999999987651 3458999999998885 11
Q ss_pred -HHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc--------------
Q 011291 158 -NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA-------------- 222 (489)
Q Consensus 158 -~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~-------------- 222 (489)
..+++.|.++ ||.|+++|+||||.|...... .....+++++++|+..+++.+.
T Consensus 63 ~~~~~~~l~~~-G~~V~~~D~rGHG~S~~~~~~-----------~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~ 130 (332)
T TIGR01607 63 KDSWIENFNKN-GYSVYGLDLQGHGESDGLQNL-----------RGHINCFDDLVYDVIQYMNRINDSIILENETKSDDE 130 (332)
T ss_pred eHHHHHHHHHC-CCcEEEecccccCCCcccccc-----------ccchhhHHHHHHHHHHHHHHhhhhhccccccccccc
Confidence 3578899886 999999999999999753210 1122588999999999987642
Q ss_pred ----------CceEEEEEeCcchHHHHHHhhhhhh--------HHHhHHhhcccc
Q 011291 223 ----------AEKAILVGHSAGALVAVNSYFEAPE--------RVAALILIAPAI 259 (489)
Q Consensus 223 ----------~~~v~liGhS~Gg~ial~~a~~~p~--------~v~~lvl~~~~~ 259 (489)
..+++|+||||||.+++.++..+++ .++++|+++|+.
T Consensus 131 ~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 131 SYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred cccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccce
Confidence 2479999999999999998876542 488888888764
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.90 E-value=3.6e-22 Score=189.57 Aligned_cols=256 Identities=13% Similarity=0.157 Sum_probs=141.9
Q ss_pred CCCcEEEEccCCCCccc--hHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFS--WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~--~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
++|+||++||++++... +..++..|.++ ||+|+++|+||||.+...... .......+|....+..+
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~g~~~~~~~~-----------~~~~~~~~D~~~~i~~l 124 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKR-GWLGVVMHFRGCSGEPNRLHR-----------IYHSGETEDARFFLRWL 124 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHC-CCEEEEEeCCCCCCCccCCcc-----------eECCCchHHHHHHHHHH
Confidence 46899999999887544 45678888886 999999999999977521100 00111233333333334
Q ss_pred HHHhcCceEEEEEeCcchHHHHHHhhhhhhH--HHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhH
Q 011291 218 IDILAAEKAILVGHSAGALVAVNSYFEAPER--VAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFL 295 (489)
Q Consensus 218 l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (489)
.+.++..+++++||||||.+++.++.++++. +.++|+++++....... ..+.
T Consensus 125 ~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~--------------------------~~~~ 178 (324)
T PRK10985 125 QREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS--------------------------YRME 178 (324)
T ss_pred HHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH--------------------------HHHh
Confidence 4445677999999999999988888877543 88888888765322000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhc
Q 011291 296 KVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYT 375 (489)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (489)
..+.. .+...+...+ ........... .... ....... .....-..+.+.. .
T Consensus 179 ~~~~~--~~~~~l~~~l-----------~~~~~~~~~~~----~~~~-------~~~~~~~-~~~~~~~~fd~~~----~ 229 (324)
T PRK10985 179 QGFSR--VYQRYLLNLL-----------KANAARKLAAY----PGTL-------PINLAQL-KSVRRLREFDDLI----T 229 (324)
T ss_pred hhHHH--HHHHHHHHHH-----------HHHHHHHHHhc----cccc-------cCCHHHH-hcCCcHHHHhhhh----e
Confidence 00000 0000000000 00000000000 0000 0000000 0000000111111 1
Q ss_pred CcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCC
Q 011291 376 KPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVP 455 (489)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~ 455 (489)
.+. .++.. ...++. ..+....+.+|++|+|+|+|++|++++++..+.+.+..++.++++++++||+.
T Consensus 230 ~~~--~g~~~-~~~~y~----------~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~ 296 (324)
T PRK10985 230 ARI--HGFAD-AIDYYR----------QCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVG 296 (324)
T ss_pred ecc--CCCCC-HHHHHH----------HCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCcee
Confidence 110 01111 111111 01345677899999999999999999988888787788899999999999999
Q ss_pred ccccH-----HHHHHHHHHHHHHhh
Q 011291 456 QEEKV-----EEFVSIVARFLQRAF 475 (489)
Q Consensus 456 ~~e~p-----~~v~~~i~~fl~~~~ 475 (489)
+++.. ....+.+.+|++...
T Consensus 297 ~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 297 FVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred eCCCCCCCCCccHHHHHHHHHHHhh
Confidence 88742 467788888887654
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.89 E-value=3.7e-22 Score=193.91 Aligned_cols=232 Identities=15% Similarity=0.120 Sum_probs=147.9
Q ss_pred cceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCc-cchHHhhHHhHhhCCCeEEEeCCCCCCCCC
Q 011291 106 NGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASV-FSWNRAMKPLAKTTSSKVLAFDRPAFGLTS 184 (489)
Q Consensus 106 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~-~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~ 184 (489)
+|..|.++.+.|.. .++.|+||++||+.+.. ..|..+.+.|+++ ||.|+++|+||+|.|.
T Consensus 177 ~g~~l~g~l~~P~~------------------~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~-Gy~vl~~D~pG~G~s~ 237 (414)
T PRK05077 177 GGGPITGFLHLPKG------------------DGPFPTVLVCGGLDSLQTDYYRLFRDYLAPR-GIAMLTIDMPSVGFSS 237 (414)
T ss_pred CCcEEEEEEEECCC------------------CCCccEEEEeCCcccchhhhHHHHHHHHHhC-CCEEEEECCCCCCCCC
Confidence 55588888776641 23456666666666553 5677888899986 9999999999999996
Q ss_pred CCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh---cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccC
Q 011291 185 RVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL---AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILA 261 (489)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~ 261 (489)
... ...+......++.+++... +.++++++||||||++++.+|..+|++|+++|+++++...
T Consensus 238 ~~~---------------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~ 302 (414)
T PRK05077 238 KWK---------------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHT 302 (414)
T ss_pred CCC---------------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccch
Confidence 421 1123334444555555543 5689999999999999999999999999999999876421
Q ss_pred ccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccc
Q 011291 262 PRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGV 341 (489)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (489)
.. .. ...+..+. .. +...+.
T Consensus 303 ~~----------------------------~~-~~~~~~~p------------------~~----~~~~la--------- 322 (414)
T PRK05077 303 LL----------------------------TD-PKRQQQVP------------------EM----YLDVLA--------- 322 (414)
T ss_pred hh----------------------------cc-hhhhhhch------------------HH----HHHHHH---------
Confidence 10 00 00000000 00 000000
Q ss_pred hhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhc-ccCCccEEEE
Q 011291 342 TLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRL-HEISCPVLIV 420 (489)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~PvLii 420 (489)
............+.. ....+ . ......+ .++++|+|+|
T Consensus 323 ----------------~~lg~~~~~~~~l~~-----------------~l~~~-s-------l~~~~~l~~~i~~PvLiI 361 (414)
T PRK05077 323 ----------------SRLGMHDASDEALRV-----------------ELNRY-S-------LKVQGLLGRRCPTPMLSG 361 (414)
T ss_pred ----------------HHhCCCCCChHHHHH-----------------Hhhhc-c-------chhhhhhccCCCCcEEEE
Confidence 000000000000000 00000 0 0000111 5689999999
Q ss_pred ecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHHHhh
Q 011291 421 TGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 475 (489)
Q Consensus 421 ~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~~ 475 (489)
+|++|.++|++.++.+.+..++.+++++|++ ++.+.++++.+.|.+||++++
T Consensus 362 ~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 362 YWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred ecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999985 456799999999999998864
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=99.89 E-value=4.3e-22 Score=180.48 Aligned_cols=126 Identities=18% Similarity=0.235 Sum_probs=94.0
Q ss_pred CceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCC
Q 011291 100 SCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPA 179 (489)
Q Consensus 100 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G 179 (489)
+.....+|..|.++...|.++ ...+.++||++||+++....|..+++.|+++ ||.|+.+|.||
T Consensus 12 ~~~~~~dG~~L~Gwl~~P~~~----------------~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~-G~~vLrfD~rg 74 (307)
T PRK13604 12 HVICLENGQSIRVWETLPKEN----------------SPKKNNTILIASGFARRMDHFAGLAEYLSSN-GFHVIRYDSLH 74 (307)
T ss_pred heEEcCCCCEEEEEEEcCccc----------------CCCCCCEEEEeCCCCCChHHHHHHHHHHHHC-CCEEEEecCCC
Confidence 334456899999999887521 0234578999999999887788999999996 99999999998
Q ss_pred C-CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh---cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhh
Q 011291 180 F-GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL---AAEKAILVGHSAGALVAVNSYFEAPERVAALILI 255 (489)
Q Consensus 180 ~-G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~ 255 (489)
+ |.|++.. ...+......|+.++++++ +.+++.|+||||||.+++..|... .++++|+.
T Consensus 75 ~~GeS~G~~---------------~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~ 137 (307)
T PRK13604 75 HVGLSSGTI---------------DEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITA 137 (307)
T ss_pred CCCCCCCcc---------------ccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEc
Confidence 7 9997421 1223333356665555544 567899999999999997666643 38889999
Q ss_pred cccc
Q 011291 256 APAI 259 (489)
Q Consensus 256 ~~~~ 259 (489)
+|..
T Consensus 138 sp~~ 141 (307)
T PRK13604 138 VGVV 141 (307)
T ss_pred CCcc
Confidence 9875
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.89 E-value=9.7e-22 Score=181.85 Aligned_cols=118 Identities=18% Similarity=0.085 Sum_probs=89.8
Q ss_pred eecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCC----ccchHHhhHHhHhhCCCeEEEeCCCC
Q 011291 104 EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGAS----VFSWNRAMKPLAKTTSSKVLAFDRPA 179 (489)
Q Consensus 104 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~----~~~~~~~~~~L~~~~G~~Vi~~D~~G 179 (489)
..+|..+......|. ..++++||++||++.. ...|..+++.|+++ ||.|+++|+||
T Consensus 8 ~~~~~~l~g~~~~p~-------------------~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~-G~~v~~~Dl~G 67 (274)
T TIGR03100 8 SCEGETLVGVLHIPG-------------------ASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEA-GFPVLRFDYRG 67 (274)
T ss_pred EcCCcEEEEEEEcCC-------------------CCCCCeEEEEeCCccccCCchhHHHHHHHHHHHC-CCEEEEeCCCC
Confidence 456777777776655 1245678888887642 33456678889886 99999999999
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh-----cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHh
Q 011291 180 FGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL-----AAEKAILVGHSAGALVAVNSYFEAPERVAALIL 254 (489)
Q Consensus 180 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l-----~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl 254 (489)
||.|... ..++.++.+|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|+
T Consensus 68 ~G~S~~~-----------------~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil 129 (274)
T TIGR03100 68 MGDSEGE-----------------NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVL 129 (274)
T ss_pred CCCCCCC-----------------CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEE
Confidence 9998631 235667778888877776 56789999999999999988765 458999999
Q ss_pred hcccc
Q 011291 255 IAPAI 259 (489)
Q Consensus 255 ~~~~~ 259 (489)
++|..
T Consensus 130 ~~p~~ 134 (274)
T TIGR03100 130 LNPWV 134 (274)
T ss_pred ECCcc
Confidence 99764
No 53
>PLN02872 triacylglycerol lipase
Probab=99.88 E-value=8e-21 Score=182.06 Aligned_cols=144 Identities=18% Similarity=0.200 Sum_probs=101.0
Q ss_pred CCCCCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchH------HhhHHhHhhC
Q 011291 95 LADPDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWN------RAMKPLAKTT 168 (489)
Q Consensus 95 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~------~~~~~L~~~~ 168 (489)
|...++...+-||..|....+.+.+. ..+...+|+||++||++.++..|. .+...|+++
T Consensus 42 y~~e~h~v~T~DGy~L~l~ri~~~~~--------------~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~- 106 (395)
T PLN02872 42 YSCTEHTIQTKDGYLLALQRVSSRNP--------------RLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADH- 106 (395)
T ss_pred CCceEEEEECCCCcEEEEEEcCCCCC--------------CCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhC-
Confidence 34444555667999998887753310 001234689999999998888874 244467775
Q ss_pred CCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHH-HHHHHHHHHh---cCceEEEEEeCcchHHHHHHhhh
Q 011291 169 SSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSV-LATLYFIDIL---AAEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 169 G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dl~~~l~~l---~~~~v~liGhS~Gg~ial~~a~~ 244 (489)
||+|+++|+||++.|.+..... ........+++++++ .|+.++++++ ..++++++||||||.+++.++ .
T Consensus 107 GydV~l~n~RG~~~s~gh~~~~------~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~ 179 (395)
T PLN02872 107 GFDVWVGNVRGTRWSYGHVTLS------EKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-T 179 (395)
T ss_pred CCCcccccccccccccCCCCCC------ccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-h
Confidence 9999999999998774321110 001112357888888 7999999886 347999999999999998544 5
Q ss_pred hhh---HHHhHHhhccccc
Q 011291 245 APE---RVAALILIAPAIL 260 (489)
Q Consensus 245 ~p~---~v~~lvl~~~~~~ 260 (489)
+|+ +|+.+++++|...
T Consensus 180 ~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 180 QPNVVEMVEAAALLCPISY 198 (395)
T ss_pred ChHHHHHHHHHHHhcchhh
Confidence 676 6889999998764
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.88 E-value=3.4e-21 Score=174.41 Aligned_cols=228 Identities=23% Similarity=0.297 Sum_probs=135.0
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHH
Q 011291 170 SKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 249 (489)
Q Consensus 170 ~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v 249 (489)
|+|+++|+||+|.|++. .......++..++++++..++++++.++++++||||||.+++.+|+++|++|
T Consensus 1 f~vi~~d~rG~g~S~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v 69 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH-----------WDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERV 69 (230)
T ss_dssp EEEEEEECTTSTTSSSC-----------CGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGE
T ss_pred CEEEEEeCCCCCCCCCC-----------ccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhh
Confidence 68999999999999841 0124577999999999999999999999999999999999999999999999
Q ss_pred HhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHH
Q 011291 250 AALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKG-MADMLHSLYK 328 (489)
Q Consensus 250 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 328 (489)
+++|+++++... .....+..... ............. ..........
T Consensus 70 ~~lvl~~~~~~~-------------------------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 116 (230)
T PF00561_consen 70 KKLVLISPPPDL-------------------------------PDGLWNRIWPR--GNLQGQLLDNFFNFLSDPIKPLLG 116 (230)
T ss_dssp EEEEEESESSHH-------------------------------HHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEeeeccc-------------------------------hhhhhHHHHhh--hhhhhhHHHhhhccccccchhhhh
Confidence 999999885200 00000000000 0000000000000 0000000000
Q ss_pred HHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhh
Q 011291 329 KVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAK 408 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (489)
....... ...+...... ... .....+..... ..+............ ...+...
T Consensus 117 ~~~~~~~------~~~~~~~~~~----~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~ 169 (230)
T PF00561_consen 117 RWPKQFF------AYDREFVEDF----LKQ----------FQSQQYARFAE-TDAFDNMFWNALGYF------SVWDPSP 169 (230)
T ss_dssp HHHHHHH------HHHHHHHHTH----HHH----------HHHHHHHHTCH-HHHHHHHHHHHHHHH------HHHHHHH
T ss_pred hhhhhee------eccCccccch----hhc----------cchhhhhHHHH-HHHHhhhcccccccc------ccccccc
Confidence 0000000 0000000000 000 00000000000 000000000000000 0014456
Q ss_pred hcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHH
Q 011291 409 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 468 (489)
Q Consensus 409 ~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~ 468 (489)
.+..+++|+|+++|++|.++|++....+.+.+|+.++++++++||+.+.++++++++.|.
T Consensus 170 ~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 170 ALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 678899999999999999999999999999999999999999999999999999998875
No 55
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=6.9e-20 Score=166.11 Aligned_cols=298 Identities=18% Similarity=0.211 Sum_probs=182.5
Q ss_pred ecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc-----------hHHhh---HHhHhhCCC
Q 011291 105 FNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS-----------WNRAM---KPLAKTTSS 170 (489)
Q Consensus 105 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~-----------~~~~~---~~L~~~~G~ 170 (489)
+++..|.|..||..+ ......||++||+.++... |..++ ..+-.. .|
T Consensus 33 l~~~~vay~T~Gtln------------------~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~-r~ 93 (368)
T COG2021 33 LSDARVAYETYGTLN------------------AEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTE-RF 93 (368)
T ss_pred ccCcEEEEEeccccc------------------ccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCcc-ce
Confidence 467889999999874 1245689999999985533 44433 123332 49
Q ss_pred eEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEE-EEEeCcchHHHHHHhhhhhhHH
Q 011291 171 KVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAI-LVGHSAGALVAVNSYFEAPERV 249 (489)
Q Consensus 171 ~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~-liGhS~Gg~ial~~a~~~p~~v 249 (489)
.||+.|..|.+..+-.+....+. ..........+++.|++..-..++++||++++. +||.||||+.+++++..||++|
T Consensus 94 fvIc~NvlG~c~GStgP~s~~p~-g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V 172 (368)
T COG2021 94 FVICTNVLGGCKGSTGPSSINPG-GKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRV 172 (368)
T ss_pred EEEEecCCCCCCCCCCCCCcCCC-CCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHH
Confidence 99999999977333333333333 444556678899999999988999999999987 8899999999999999999999
Q ss_pred HhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHH-HHHHHH-------------HHHH
Q 011291 250 AALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFL-KYITQA-------------MMQV 315 (489)
Q Consensus 250 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~ 315 (489)
+++|.+++..... +....|....+.. ...+.. -. .
T Consensus 173 ~~~i~ia~~~r~s------------------------------~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL-~ 221 (368)
T COG2021 173 RRAIPIATAARLS------------------------------AQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGL-R 221 (368)
T ss_pred hhhheecccccCC------------------------------HHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhH-H
Confidence 9999999864322 1111111111100 000000 00 0
Q ss_pred HhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHH----HH--HhhcCchhhHHHHHhhhcCcccccchhhHHHH
Q 011291 316 AKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAA----VR--RAWYNSKEVAEHVIEGYTKPLRVKGWDRALVE 389 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (489)
..++...+......... ++|+... .. ...+..+.+.++..+.+...+. ...+..
T Consensus 222 ~AR~l~~ltYrS~~~~~----------------~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfD----aNsYL~ 281 (368)
T COG2021 222 LARMLAHLTYRSEEELD----------------ERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFD----ANSYLY 281 (368)
T ss_pred HHHHHHHHHccCHHHHH----------------HHhcccccccccCCCchhHHHHHHHHHHHHHHHhccC----cchHHH
Confidence 00000000000000000 0010000 00 0000111122222222222221 223333
Q ss_pred HHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCE-EEEec-CCCCCCccccHHHHHHHH
Q 011291 390 FTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGST-FEVIK-NCGHVPQEEKVEEFVSIV 467 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~-~~~i~-g~gH~~~~e~p~~v~~~i 467 (489)
....+..........++...|++|++|+|++.-+.|.++|++..+.+.+.++.+. +++|+ ..||..++...+.+...|
T Consensus 282 lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i 361 (368)
T COG2021 282 LTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLI 361 (368)
T ss_pred HHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHH
Confidence 3344433433344467778899999999999999999999999999999998876 76663 569999999899999999
Q ss_pred HHHHHH
Q 011291 468 ARFLQR 473 (489)
Q Consensus 468 ~~fl~~ 473 (489)
..||+.
T Consensus 362 ~~fL~~ 367 (368)
T COG2021 362 RKFLAL 367 (368)
T ss_pred HHHhhc
Confidence 999974
No 56
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.85 E-value=2.7e-20 Score=183.14 Aligned_cols=107 Identities=9% Similarity=0.066 Sum_probs=86.2
Q ss_pred CCCcEEEEccCCCCccchH-----HhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWN-----RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLAT 214 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~-----~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 214 (489)
..+|||++||+....+.|+ .++..|.++ ||+|+++|++|+|.+.+.. ....|..+.+.+++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~-------------~~ddY~~~~i~~al 252 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQ-GHTVFVISWRNPDASQADK-------------TFDDYIRDGVIAAL 252 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHC-CcEEEEEECCCCCcccccC-------------ChhhhHHHHHHHHH
Confidence 4689999999988888775 689999996 9999999999999886421 23456666677778
Q ss_pred HHHHHHhcCceEEEEEeCcchHHHH----HHhhhh-hhHHHhHHhhccccc
Q 011291 215 LYFIDILAAEKAILVGHSAGALVAV----NSYFEA-PERVAALILIAPAIL 260 (489)
Q Consensus 215 ~~~l~~l~~~~v~liGhS~Gg~ial----~~a~~~-p~~v~~lvl~~~~~~ 260 (489)
..+++.++.++++++||||||.++. .+++.+ +++|++++++++...
T Consensus 253 ~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 253 EVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred HHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 8888888999999999999999852 245554 778999999998754
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.85 E-value=9.4e-20 Score=175.11 Aligned_cols=103 Identities=11% Similarity=0.127 Sum_probs=81.8
Q ss_pred CCCcEEEEccCCCCccch-----HHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHH-
Q 011291 140 IGFPMVLFHGFGASVFSW-----NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA- 213 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~-----~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 213 (489)
.++|||++||+..+...+ ..+++.|.++ ||+|+++|++|+|.|+. ..++++++.+
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~-G~~V~~~D~~g~g~s~~------------------~~~~~d~~~~~ 121 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLER-GQDVYLIDWGYPDRADR------------------YLTLDDYINGY 121 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHC-CCeEEEEeCCCCCHHHh------------------cCCHHHHHHHH
Confidence 356899999986555444 5789999986 99999999999998762 2355555433
Q ss_pred ----HHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccC
Q 011291 214 ----TLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILA 261 (489)
Q Consensus 214 ----l~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~ 261 (489)
+..+++..+.++++++||||||.+++.++..+|++|+++|+++++...
T Consensus 122 ~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 122 IDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 344555567889999999999999999999999999999999987643
No 58
>PRK10566 esterase; Provisional
Probab=99.84 E-value=5.6e-20 Score=168.58 Aligned_cols=97 Identities=19% Similarity=0.183 Sum_probs=69.4
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCC--CChHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNP--YSMAFSVLATLYF 217 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dl~~~ 217 (489)
+.|+||++||++++...|..+...|+++ ||.|+++|+||||.+...... ..... ....+..+|+.++
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQA-GFRVIMPDAPMHGARFSGDEA----------RRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhC-CCEEEEecCCcccccCCCccc----------cchhhHHHHHHHHHHHHHHH
Confidence 4689999999999988899999999986 999999999999976421100 00000 0111223344444
Q ss_pred HHH------hcCceEEEEEeCcchHHHHHHhhhhhh
Q 011291 218 IDI------LAAEKAILVGHSAGALVAVNSYFEAPE 247 (489)
Q Consensus 218 l~~------l~~~~v~liGhS~Gg~ial~~a~~~p~ 247 (489)
++. ++.++++++|||+||.+++.++.++|+
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~ 130 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW 130 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCC
Confidence 433 245789999999999999999888876
No 59
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.84 E-value=1.9e-20 Score=161.02 Aligned_cols=105 Identities=28% Similarity=0.326 Sum_probs=89.3
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
..+|.++++||++.+...|..+..+|....-.+|+++|+||||++.. .+....+.+.++.|+.+++
T Consensus 72 t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~--------------~~e~dlS~eT~~KD~~~~i 137 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKV--------------ENEDDLSLETMSKDFGAVI 137 (343)
T ss_pred CCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCcccc--------------CChhhcCHHHHHHHHHHHH
Confidence 47899999999999999999999999887668899999999999974 3445689999999999999
Q ss_pred HHh---cCceEEEEEeCcchHHHHHHhhh--hhhHHHhHHhhccc
Q 011291 219 DIL---AAEKAILVGHSAGALVAVNSYFE--APERVAALILIAPA 258 (489)
Q Consensus 219 ~~l---~~~~v~liGhS~Gg~ial~~a~~--~p~~v~~lvl~~~~ 258 (489)
+.+ ...+++||||||||.||...|.. -|. +.++++++-.
T Consensus 138 ~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 138 KELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred HHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 887 34689999999999999877754 365 8888887653
No 60
>PRK11071 esterase YqiA; Provisional
Probab=99.82 E-value=2.1e-19 Score=155.97 Aligned_cols=89 Identities=18% Similarity=0.131 Sum_probs=73.3
Q ss_pred CcEEEEccCCCCccchHH--hhHHhHhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 142 FPMVLFHGFGASVFSWNR--AMKPLAKT-TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~--~~~~L~~~-~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
|+||++||++++...|.. +.+.+.+. .+|+|+++|+||||. +.++++.+++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~~--------------------------~~~~~l~~l~ 55 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYPA--------------------------DAAELLESLV 55 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCHH--------------------------HHHHHHHHHH
Confidence 579999999999999874 33555442 269999999998741 5678889999
Q ss_pred HHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 219 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 219 ~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
++++.++++++||||||++++.+|.++|. .+|+++|+.
T Consensus 56 ~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~ 93 (190)
T PRK11071 56 LEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAV 93 (190)
T ss_pred HHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCC
Confidence 99999999999999999999999999883 457787754
No 61
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.82 E-value=2.1e-19 Score=183.92 Aligned_cols=246 Identities=19% Similarity=0.172 Sum_probs=162.3
Q ss_pred CCCCCCcee-eecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc--hHHhhHHhHhhCCCe
Q 011291 95 LADPDSCFC-EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS--WNRAMKPLAKTTSSK 171 (489)
Q Consensus 95 ~~~~~~~~~-~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~--~~~~~~~L~~~~G~~ 171 (489)
+..++...+ ..||.+|+++++.|.+ .+..++-|.||++||++..... |....+.|+.. ||.
T Consensus 362 ~~~~e~~~~~~~dG~~i~~~l~~P~~---------------~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~-G~~ 425 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHGWLYKPPG---------------FDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASA-GYA 425 (620)
T ss_pred cCCceEEEEEcCCCCEEEEEEecCCC---------------CCCCCCCCEEEEeCCCCccccccccchhhHHHhcC-CeE
Confidence 344554433 4589999999999873 1112234889999999865544 66778889986 999
Q ss_pred EEEeCCCCCCC-CCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh---cCceEEEEEeCcchHHHHHHhhhhhh
Q 011291 172 VLAFDRPAFGL-TSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL---AAEKAILVGHSAGALVAVNSYFEAPE 247 (489)
Q Consensus 172 Vi~~D~~G~G~-S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~liGhS~Gg~ial~~a~~~p~ 247 (489)
|+.+|+||.+. ....... ....++....+|+.+.+. +++.. +.++++|.|||+||++++..+...|
T Consensus 426 V~~~n~RGS~GyG~~F~~~--------~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~- 495 (620)
T COG1506 426 VLAPNYRGSTGYGREFADA--------IRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP- 495 (620)
T ss_pred EEEeCCCCCCccHHHHHHh--------hhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-
Confidence 99999997433 1110000 122445667777777777 55443 3459999999999999998888887
Q ss_pred HHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 011291 248 RVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLY 327 (489)
Q Consensus 248 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (489)
++++.+...+........
T Consensus 496 ~f~a~~~~~~~~~~~~~~-------------------------------------------------------------- 513 (620)
T COG1506 496 RFKAAVAVAGGVDWLLYF-------------------------------------------------------------- 513 (620)
T ss_pred hhheEEeccCcchhhhhc--------------------------------------------------------------
Confidence 788777776643211000
Q ss_pred HHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhh
Q 011291 328 KKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLA 407 (489)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (489)
......+..........+.. ... .+...++.
T Consensus 514 --------------------------------~~~~~~~~~~~~~~~~~~~~----~~~-------------~~~~~sp~ 544 (620)
T COG1506 514 --------------------------------GESTEGLRFDPEENGGGPPE----DRE-------------KYEDRSPI 544 (620)
T ss_pred --------------------------------cccchhhcCCHHHhCCCccc----ChH-------------HHHhcChh
Confidence 00000000000000000000 000 01112566
Q ss_pred hhcccCCccEEEEecCCCCCCCchhHHHHHhhCC----CCEEEEecCCCCCCcc-ccHHHHHHHHHHHHHHhhCC
Q 011291 408 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQE-EKVEEFVSIVARFLQRAFGY 477 (489)
Q Consensus 408 ~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~----~~~~~~i~g~gH~~~~-e~p~~v~~~i~~fl~~~~~~ 477 (489)
....++++|+|+|||++|..||.+++..+.+++. ++++++||+.||.+.. ++...+.+.+.+|++++++.
T Consensus 545 ~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 545 FYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred hhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 7778999999999999999999999999888774 4699999999998866 56778999999999998764
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.80 E-value=2e-19 Score=150.30 Aligned_cols=93 Identities=29% Similarity=0.455 Sum_probs=74.6
Q ss_pred cEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc
Q 011291 143 PMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 222 (489)
Q Consensus 143 ~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~ 222 (489)
+||++||++++...|..+.+.|+++ ||.|+.+|+||+|.+.. .....++.+++. .+..+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~~ 59 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQ-GYAVVAFDYPGHGDSDG------------------ADAVERVLADIR--AGYPD 59 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHT-TEEEEEESCTTSTTSHH------------------SHHHHHHHHHHH--HHHCT
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHC-CCEEEEEecCCCCccch------------------hHHHHHHHHHHH--hhcCC
Confidence 5899999999999999999999997 99999999999999842 112222222222 11236
Q ss_pred CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcc
Q 011291 223 AEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 257 (489)
Q Consensus 223 ~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~ 257 (489)
.++++++|||+||.+++.++.++ .+++++|++++
T Consensus 60 ~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 60 PDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp CCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred CCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 78999999999999999999887 68999999987
No 63
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.79 E-value=1.8e-18 Score=149.21 Aligned_cols=195 Identities=22% Similarity=0.268 Sum_probs=138.5
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
..++||++||..........+...|..+.+++|+.+|++|+|.|.+.+. +....+|.-...+.+.+
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps--------------E~n~y~Di~avye~Lr~ 124 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS--------------ERNLYADIKAVYEWLRN 124 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcc--------------cccchhhHHHHHHHHHh
Confidence 3589999999977666666667777775679999999999999985432 22222222222222333
Q ss_pred Hhc-CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHH
Q 011291 220 ILA-AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVY 298 (489)
Q Consensus 220 ~l~-~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (489)
..| .++++|+|+|+|+..++.+|.+.| ++++||.+|.....+..
T Consensus 125 ~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~--------------------------------- 169 (258)
T KOG1552|consen 125 RYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVA--------------------------------- 169 (258)
T ss_pred hcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhh---------------------------------
Confidence 343 679999999999999999999998 99999999864221100
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcc
Q 011291 299 TILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPL 378 (489)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (489)
... ..
T Consensus 170 --------------------------------------------------------------~~~-------------~~ 174 (258)
T KOG1552|consen 170 --------------------------------------------------------------FPD-------------TK 174 (258)
T ss_pred --------------------------------------------------------------ccC-------------cc
Confidence 000 00
Q ss_pred cccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCC-EEEEecCCCCCCcc
Q 011291 379 RVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGS-TFEVIKNCGHVPQE 457 (489)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~-~~~~i~g~gH~~~~ 457 (489)
. ..|... ....+.+..|+||||++||++|.++|.....++.+..++. +-.++.|+||.-..
T Consensus 175 ~-~~~~d~-----------------f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~ 236 (258)
T KOG1552|consen 175 T-TYCFDA-----------------FPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIE 236 (258)
T ss_pred e-EEeecc-----------------ccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccc
Confidence 0 001111 1224667889999999999999999999999999999875 88889999998765
Q ss_pred ccHHHHHHHHHHHHHHhhCC
Q 011291 458 EKVEEFVSIVARFLQRAFGY 477 (489)
Q Consensus 458 e~p~~v~~~i~~fl~~~~~~ 477 (489)
-. .++.+.+..|+......
T Consensus 237 ~~-~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 237 LY-PEYIEHLRRFISSVLPS 255 (258)
T ss_pred cC-HHHHHHHHHHHHHhccc
Confidence 44 44677888888776544
No 64
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.79 E-value=2.6e-18 Score=185.97 Aligned_cols=104 Identities=19% Similarity=0.240 Sum_probs=80.8
Q ss_pred CCCcEEEEccCCCCccchHHh-----hHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRA-----MKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLAT 214 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~-----~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 214 (489)
.++||||+||++.+.+.|+.. ++.|.++ ||+|+++|+ |.++++.. ....++.+++..+
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~-g~~v~~~d~---G~~~~~~~-------------~~~~~l~~~i~~l 128 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRA-GLDPWVIDF---GSPDKVEG-------------GMERNLADHVVAL 128 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHC-CCEEEEEcC---CCCChhHc-------------CccCCHHHHHHHH
Confidence 568999999999999999865 7889886 999999994 66654211 1235777777666
Q ss_pred HHHHHH---hcCceEEEEEeCcchHHHHHHhhhh-hhHHHhHHhhccccc
Q 011291 215 LYFIDI---LAAEKAILVGHSAGALVAVNSYFEA-PERVAALILIAPAIL 260 (489)
Q Consensus 215 ~~~l~~---l~~~~v~liGhS~Gg~ial~~a~~~-p~~v~~lvl~~~~~~ 260 (489)
.+.++. +..++++++||||||.+++.+++.+ +++|+++|+++++..
T Consensus 129 ~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 129 SEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred HHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 666554 3457899999999999999988755 568999999887753
No 65
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.77 E-value=4e-18 Score=141.09 Aligned_cols=219 Identities=16% Similarity=0.199 Sum_probs=152.7
Q ss_pred ceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCC
Q 011291 101 CFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAF 180 (489)
Q Consensus 101 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~ 180 (489)
...+.|.++++.+....+ .+.|+++++||..|+.....+++.-+..+.+..|+.+++||+
T Consensus 58 ~l~T~D~vtL~a~~~~~E--------------------~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGY 117 (300)
T KOG4391|consen 58 ELRTRDKVTLDAYLMLSE--------------------SSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGY 117 (300)
T ss_pred EEEcCcceeEeeeeeccc--------------------CCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeecc
Confidence 344557888887766543 368999999999999988888888777777899999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh------cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHh
Q 011291 181 GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL------AAEKAILVGHSAGALVAVNSYFEAPERVAALIL 254 (489)
Q Consensus 181 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl 254 (489)
|.|++.+.. +-+.-|-.++++++ +..++++.|.|.||.+|+.+|++..+++.++|+
T Consensus 118 G~S~GspsE------------------~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~iv 179 (300)
T KOG4391|consen 118 GKSEGSPSE------------------EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIV 179 (300)
T ss_pred ccCCCCccc------------------cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeee
Confidence 999965432 12222333444443 456899999999999999999999999999999
Q ss_pred hcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 011291 255 IAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSAT 334 (489)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (489)
-++....+..... .+.+ +.
T Consensus 180 ENTF~SIp~~~i~------------------~v~p----~~--------------------------------------- 198 (300)
T KOG4391|consen 180 ENTFLSIPHMAIP------------------LVFP----FP--------------------------------------- 198 (300)
T ss_pred echhccchhhhhh------------------eecc----ch---------------------------------------
Confidence 8876543311000 0000 00
Q ss_pred hhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCC
Q 011291 335 LRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEIS 414 (489)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 414 (489)
...+..++. +.. | .....+...+
T Consensus 199 -----~k~i~~lc~--------kn~-----------------------~---------------------~S~~ki~~~~ 221 (300)
T KOG4391|consen 199 -----MKYIPLLCY--------KNK-----------------------W---------------------LSYRKIGQCR 221 (300)
T ss_pred -----hhHHHHHHH--------Hhh-----------------------h---------------------cchhhhcccc
Confidence 000000000 000 0 1123345678
Q ss_pred ccEEEEecCCCCCCCchhHHHHHhhCCC--CEEEEecCCCCCCccccHHHHHHHHHHHHHHhhC
Q 011291 415 CPVLIVTGDTDRIVPSWNAERLSRAIPG--STFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG 476 (489)
Q Consensus 415 ~PvLii~G~~D~~vp~~~~~~l~~~~~~--~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~~~ 476 (489)
+|.|++.|.+|.+|||-+.+.+.+.+|. .++..||++.|.-... -+-..+.|.+||.+...
T Consensus 222 ~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 222 MPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVK 284 (300)
T ss_pred CceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhcc
Confidence 9999999999999999999999999974 6899999999965332 24467899999988754
No 66
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.76 E-value=1.2e-16 Score=147.31 Aligned_cols=103 Identities=36% Similarity=0.532 Sum_probs=85.0
Q ss_pred CCcEEEEccCCCCccchHHhhHHhHhhCC-CeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 141 GFPMVLFHGFGASVFSWNRAMKPLAKTTS-SKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~~~~~~~~L~~~~G-~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
+|+|+++||++++...|......+..... |+|+++|+||||.|. . . .+.....++++..+++
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~--------------~--~~~~~~~~~~~~~~~~ 83 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-P--------------A--GYSLSAYADDLAALLD 83 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-c--------------c--cccHHHHHHHHHHHHH
Confidence 45899999999999998884444443211 899999999999996 0 0 2344455899999999
Q ss_pred HhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 220 ILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 220 ~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
+++..+++++||||||.+++.++.++|++++++|++++...
T Consensus 84 ~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 84 ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 99999999999999999999999999999999999997653
No 67
>PRK11460 putative hydrolase; Provisional
Probab=99.75 E-value=1.9e-17 Score=148.81 Aligned_cols=113 Identities=15% Similarity=0.093 Sum_probs=71.3
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCC---ChHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPY---SMAFSVLATLY 216 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dl~~ 216 (489)
..|.||++||++++...|..+.+.|... ++.+..++.+|...+...... .|.......... .+.+..+.+.+
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~-~~~~~~i~~~g~~~~~~~~g~----~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPA-FPDALVVSVGGPEPSGNGAGR----QWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHH-CCCCEEECCCCCCCcCCCCCc----ccccCCCCCccchHHHHHHHHHHHHH
Confidence 4678999999999999999999999875 666667777776433211110 111100001111 12222233333
Q ss_pred HHH----Hhc--CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcc
Q 011291 217 FID----ILA--AEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 257 (489)
Q Consensus 217 ~l~----~l~--~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~ 257 (489)
+++ ..+ .++++++|||+||.+++.++.++|+.+.+++.+++
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg 136 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSG 136 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecc
Confidence 333 333 35899999999999999999888877776665554
No 68
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.74 E-value=1.1e-17 Score=149.32 Aligned_cols=201 Identities=19% Similarity=0.207 Sum_probs=121.0
Q ss_pred hHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH--hcCceEEEEEeCcc
Q 011291 157 WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI--LAAEKAILVGHSAG 234 (489)
Q Consensus 157 ~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~v~liGhS~G 234 (489)
|......|+++ ||.|+.+|+||.+........ ......+...++|.++.+..+++. ++.+++.|+|||+|
T Consensus 3 f~~~~~~la~~-Gy~v~~~~~rGs~g~g~~~~~-------~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~G 74 (213)
T PF00326_consen 3 FNWNAQLLASQ-GYAVLVPNYRGSGGYGKDFHE-------AGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYG 74 (213)
T ss_dssp -SHHHHHHHTT-T-EEEEEE-TTSSSSHHHHHH-------TTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHH
T ss_pred eeHHHHHHHhC-CEEEEEEcCCCCCccchhHHH-------hhhccccccchhhHHHHHHHHhccccccceeEEEEccccc
Confidence 44567778886 999999999997743211000 001112223344444444444443 24579999999999
Q ss_pred hHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 011291 235 ALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQ 314 (489)
Q Consensus 235 g~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (489)
|++++.++..+|++++++|..++...........
T Consensus 75 G~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~---------------------------------------------- 108 (213)
T PF00326_consen 75 GYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTT---------------------------------------------- 108 (213)
T ss_dssp HHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHT----------------------------------------------
T ss_pred ccccchhhcccceeeeeeeccceecchhcccccc----------------------------------------------
Confidence 9999999998999999999988865432110000
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHH
Q 011291 315 VAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAAL 394 (489)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (489)
. . +.......+..+.........
T Consensus 109 -----------------------------------------------~-~-~~~~~~~~~~~~~~~~~~~~~-------- 131 (213)
T PF00326_consen 109 -----------------------------------------------D-I-YTKAEYLEYGDPWDNPEFYRE-------- 131 (213)
T ss_dssp -----------------------------------------------C-C-HHHGHHHHHSSTTTSHHHHHH--------
T ss_pred -----------------------------------------------c-c-cccccccccCccchhhhhhhh--------
Confidence 0 0 000000000000000000000
Q ss_pred hcCCcCCCCchhhhhccc--CCccEEEEecCCCCCCCchhHHHHHhhCC----CCEEEEecCCCCCCc-cccHHHHHHHH
Q 011291 395 LIDNESKMNPPLAKRLHE--ISCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQ-EEKVEEFVSIV 467 (489)
Q Consensus 395 ~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D~~vp~~~~~~l~~~~~----~~~~~~i~g~gH~~~-~e~p~~v~~~i 467 (489)
.+....+.+ +++|+|+++|++|..||++++..+.+.+. +++++++|++||.+. .+...++.+.+
T Consensus 132 ---------~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~ 202 (213)
T PF00326_consen 132 ---------LSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERI 202 (213)
T ss_dssp ---------HHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHH
T ss_pred ---------hccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHH
Confidence 022333444 78999999999999999998888887763 479999999999664 35567889999
Q ss_pred HHHHHHhhCC
Q 011291 468 ARFLQRAFGY 477 (489)
Q Consensus 468 ~~fl~~~~~~ 477 (489)
.+||+++++.
T Consensus 203 ~~f~~~~l~~ 212 (213)
T PF00326_consen 203 LDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHTT-
T ss_pred HHHHHHHcCC
Confidence 9999998763
No 69
>PLN02442 S-formylglutathione hydrolase
Probab=99.72 E-value=2.3e-16 Score=146.35 Aligned_cols=138 Identities=17% Similarity=0.144 Sum_probs=88.0
Q ss_pred ecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHh---hHHhHhhCCCeEEEeCCCCCC
Q 011291 105 FNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRA---MKPLAKTTSSKVLAFDRPAFG 181 (489)
Q Consensus 105 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~---~~~L~~~~G~~Vi~~D~~G~G 181 (489)
.-|..+.|..|-|++. ...+.|+|+++||++++...|... ...+.. .|+.|+.+|..++|
T Consensus 27 ~l~~~~~~~vy~P~~~----------------~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~-~g~~Vv~pd~~~~g 89 (283)
T PLN02442 27 TLGCSMTFSVYFPPAS----------------DSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAA-RGIALVAPDTSPRG 89 (283)
T ss_pred ccCCceEEEEEcCCcc----------------cCCCCCEEEEecCCCcChHHHHHhhhHHHHHhh-cCeEEEecCCCCCC
Confidence 4567788888776510 123568999999999888776442 344454 49999999998776
Q ss_pred CCCCCCCCCC----CCCCcCCCC-------CCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHH
Q 011291 182 LTSRVFPFQQ----PTPDTENKK-------PLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVA 250 (489)
Q Consensus 182 ~S~~~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~ 250 (489)
.-.......+ ......+.. ....+-.+++...+....+.++.++++|+||||||+.++.++.++|++++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~ 169 (283)
T PLN02442 90 LNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYK 169 (283)
T ss_pred CCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEE
Confidence 2111000000 000000000 01122234444445555555678899999999999999999999999999
Q ss_pred hHHhhcccc
Q 011291 251 ALILIAPAI 259 (489)
Q Consensus 251 ~lvl~~~~~ 259 (489)
+++++++..
T Consensus 170 ~~~~~~~~~ 178 (283)
T PLN02442 170 SVSAFAPIA 178 (283)
T ss_pred EEEEECCcc
Confidence 999988764
No 70
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.72 E-value=1.1e-16 Score=142.91 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=57.9
Q ss_pred hhhhhcccCCccEEEEecCCCCCCCchhHHHHHh-hCCCCEEEEecCCCCCCccc----cHH-HHHHHHHHHHHHhhC
Q 011291 405 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSR-AIPGSTFEVIKNCGHVPQEE----KVE-EFVSIVARFLQRAFG 476 (489)
Q Consensus 405 ~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~-~~~~~~~~~i~g~gH~~~~e----~p~-~v~~~i~~fl~~~~~ 476 (489)
+....+.+|.+|+|+|+..+|++++++....... ..|++.+..-+.+||..++. ++. ...+.|.+||+....
T Consensus 265 Ss~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 265 SSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred cccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 5567889999999999999999999876666655 56788999999999988776 333 667788888876543
No 71
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.72 E-value=1.2e-15 Score=133.55 Aligned_cols=104 Identities=27% Similarity=0.369 Sum_probs=93.5
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 221 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l 221 (489)
.+||-+||.||+..+|..+.+.|.+. |+++|.+++||+|.+++++ ...|+-.+...-+.++++.+
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~-~iR~I~iN~PGf~~t~~~~--------------~~~~~n~er~~~~~~ll~~l 100 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEA-GIRFIGINYPGFGFTPGYP--------------DQQYTNEERQNFVNALLDEL 100 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHc-CeEEEEeCCCCCCCCCCCc--------------ccccChHHHHHHHHHHHHHc
Confidence 37999999999999999999999995 9999999999999998653 35688889999999999999
Q ss_pred cCc-eEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCc
Q 011291 222 AAE-KAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAP 262 (489)
Q Consensus 222 ~~~-~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~ 262 (489)
+++ +++++|||.||-.|+.++..+| ..++++++|++..+
T Consensus 101 ~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 101 GIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRP 140 (297)
T ss_pred CCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcccc
Confidence 875 7889999999999999999996 77999999988655
No 72
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.71 E-value=6.6e-16 Score=143.05 Aligned_cols=139 Identities=17% Similarity=0.203 Sum_probs=91.7
Q ss_pred ecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHH--hhHHhHhhCCCeEEEeCC--CCC
Q 011291 105 FNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNR--AMKPLAKTTSSKVLAFDR--PAF 180 (489)
Q Consensus 105 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~--~~~~L~~~~G~~Vi~~D~--~G~ 180 (489)
..+..+.|..+.|++. ..++.|+|+++||++++...|.. .+..++.+.||.|+++|. +|+
T Consensus 22 ~~~~~~~~~v~~P~~~----------------~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~ 85 (275)
T TIGR02821 22 TCGVPMTFGVFLPPQA----------------AAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGT 85 (275)
T ss_pred ccCCceEEEEEcCCCc----------------cCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcC
Confidence 4567788888887620 01346899999999998888754 345666545999999998 555
Q ss_pred CCCCCCCCCCC--CCCCcCCC--CC-CCCCChH-HHHHHHHHHHHH---hcCceEEEEEeCcchHHHHHHhhhhhhHHHh
Q 011291 181 GLTSRVFPFQQ--PTPDTENK--KP-LNPYSMA-FSVLATLYFIDI---LAAEKAILVGHSAGALVAVNSYFEAPERVAA 251 (489)
Q Consensus 181 G~S~~~~~~~~--~~~~~~~~--~~-~~~~~~~-~~~~dl~~~l~~---l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~ 251 (489)
|.+........ ...+..+. .+ ...+... .+++++..+++. ++.++++++||||||++++.++.++|+.+++
T Consensus 86 ~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~ 165 (275)
T TIGR02821 86 GIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKS 165 (275)
T ss_pred CCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceE
Confidence 54432110000 00000000 00 1123333 346778787876 4567899999999999999999999999999
Q ss_pred HHhhcccc
Q 011291 252 LILIAPAI 259 (489)
Q Consensus 252 lvl~~~~~ 259 (489)
++++++..
T Consensus 166 ~~~~~~~~ 173 (275)
T TIGR02821 166 VSAFAPIV 173 (275)
T ss_pred EEEECCcc
Confidence 99988764
No 73
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.71 E-value=2.5e-16 Score=130.49 Aligned_cols=104 Identities=19% Similarity=0.238 Sum_probs=80.9
Q ss_pred CCCCcEEEEccCCCCccc--hHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFS--WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY 216 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~--~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ 216 (489)
++...||++||+-.+... ...++..|.+. |+.++.+|++|.|.|+..... +.|. ..++|+..
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~-gis~fRfDF~GnGeS~gsf~~-------------Gn~~--~eadDL~s 94 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKE-GISAFRFDFSGNGESEGSFYY-------------GNYN--TEADDLHS 94 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhc-CceEEEEEecCCCCcCCcccc-------------Cccc--chHHHHHH
Confidence 456789999999887644 34567778875 999999999999999864322 3333 34599999
Q ss_pred HHHHhcC-ce--EEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 217 FIDILAA-EK--AILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 217 ~l~~l~~-~~--v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
+++++.. .+ -+|+|||-||.+++.+|.++++ ++-+|.+++-+
T Consensus 95 V~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRy 139 (269)
T KOG4667|consen 95 VIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRY 139 (269)
T ss_pred HHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEccccc
Confidence 9999843 33 3688999999999999999987 78888777654
No 74
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.70 E-value=7.1e-17 Score=146.11 Aligned_cols=104 Identities=15% Similarity=0.095 Sum_probs=84.4
Q ss_pred CCcEEEEccCCCCc----cchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Q 011291 141 GFPMVLFHGFGASV----FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY 216 (489)
Q Consensus 141 ~p~VlllHG~~~~~----~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ 216 (489)
.++|||+||++... ..|..+++.|+++ ||.|+++|+||||.|.... ...++..+++|+..
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~-Gy~Vl~~Dl~G~G~S~g~~---------------~~~~~~~~~~Dv~~ 88 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAG-GFGVLQIDLYGCGDSAGDF---------------AAARWDVWKEDVAA 88 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCcc---------------ccCCHHHHHHHHHH
Confidence 57899999998653 3466678889886 9999999999999997421 23467778888776
Q ss_pred HHHH---hcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 217 FIDI---LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 217 ~l~~---l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
+++. .+.++++++||||||.+++.+|.++|++++++|+++|...
T Consensus 89 ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 89 AYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 5544 4678999999999999999999999999999999998653
No 75
>PLN00021 chlorophyllase
Probab=99.67 E-value=1.3e-15 Score=141.87 Aligned_cols=105 Identities=16% Similarity=0.081 Sum_probs=74.9
Q ss_pred CCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 138 KKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 138 ~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
.++.|+||++||++.+...|..+++.|+++ ||.|+++|++|++.+.. .....+..+..+.+...
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~~Las~-G~~VvapD~~g~~~~~~---------------~~~i~d~~~~~~~l~~~ 112 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQHIASH-GFIVVAPQLYTLAGPDG---------------TDEIKDAAAVINWLSSG 112 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHHHHHhC-CCEEEEecCCCcCCCCc---------------hhhHHHHHHHHHHHHhh
Confidence 356789999999999999999999999996 99999999998643221 00111122222222222
Q ss_pred HHH-------hcCceEEEEEeCcchHHHHHHhhhhhh-----HHHhHHhhccc
Q 011291 218 IDI-------LAAEKAILVGHSAGALVAVNSYFEAPE-----RVAALILIAPA 258 (489)
Q Consensus 218 l~~-------l~~~~v~liGhS~Gg~ial~~a~~~p~-----~v~~lvl~~~~ 258 (489)
++. .+.++++++|||+||.+++.+|..+++ +++++|+++|.
T Consensus 113 l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 113 LAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred hhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 222 234789999999999999999988874 56778877765
No 76
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.66 E-value=6.8e-16 Score=138.16 Aligned_cols=186 Identities=21% Similarity=0.148 Sum_probs=116.7
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCC---CCChHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN---PYSMAFSVLATL 215 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dl~ 215 (489)
++.|.||++|++.|-....+.+++.|+++ ||.|+++|+-+-......... ....... ....+....++.
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 83 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPE-------EAFAAMRELFAPRPEQVAADLQ 83 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHH-------CHHHHHHHCHHHSHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhc-CCCEEecccccCCCCCccchh-------hHHHHHHHHHhhhHHHHHHHHH
Confidence 46789999999998887778899999997 999999998643331100000 0000000 000234556666
Q ss_pred HHHHHh------cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCccccccccccccc
Q 011291 216 YFIDIL------AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVN 289 (489)
Q Consensus 216 ~~l~~l------~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (489)
+.++.+ +.++|.++|+||||.+++.++... ..+++.|..-|....
T Consensus 84 aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~---------------------------- 134 (218)
T PF01738_consen 84 AAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP---------------------------- 134 (218)
T ss_dssp HHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG----------------------------
T ss_pred HHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC----------------------------
Confidence 666665 236899999999999999998877 467777766551100
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHH
Q 011291 290 LLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEH 369 (489)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (489)
T Consensus 135 -------------------------------------------------------------------------------- 134 (218)
T PF01738_consen 135 -------------------------------------------------------------------------------- 134 (218)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhC----CCCEE
Q 011291 370 VIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAI----PGSTF 445 (489)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~----~~~~~ 445 (489)
........++++|+++++|++|+.++.+..+.+.+.+ ...++
T Consensus 135 ----------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~ 180 (218)
T PF01738_consen 135 ----------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEV 180 (218)
T ss_dssp ----------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEE
T ss_pred ----------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEE
Confidence 0122345678899999999999999998777777666 46799
Q ss_pred EEecCCCCCCcccc--------HHHHHHHHHHHHHHhh
Q 011291 446 EVIKNCGHVPQEEK--------VEEFVSIVARFLQRAF 475 (489)
Q Consensus 446 ~~i~g~gH~~~~e~--------p~~v~~~i~~fl~~~~ 475 (489)
++|+|++|.+.... .++-.+.+.+||++++
T Consensus 181 ~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 181 HVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp EEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred EECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 99999999775532 2567788888888764
No 77
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.66 E-value=6.1e-15 Score=131.11 Aligned_cols=266 Identities=21% Similarity=0.286 Sum_probs=146.9
Q ss_pred eeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc-hHHh-----hHHhHhhCCCeEEEeC
Q 011291 103 CEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS-WNRA-----MKPLAKTTSSKVLAFD 176 (489)
Q Consensus 103 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~-~~~~-----~~~L~~~~G~~Vi~~D 176 (489)
++..-..+++..+|.. .+++|++|-.|..|.+... |..+ .+.+.++ |.|+=+|
T Consensus 4 v~t~~G~v~V~v~G~~-------------------~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~--f~i~Hi~ 62 (283)
T PF03096_consen 4 VETPYGSVHVTVQGDP-------------------KGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN--FCIYHID 62 (283)
T ss_dssp EEETTEEEEEEEESS---------------------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT--SEEEEEE
T ss_pred eccCceEEEEEEEecC-------------------CCCCceEEEeccccccchHHHHHHhcchhHHHHhhc--eEEEEEe
Confidence 4455568889888876 3468999999999987755 6554 3556664 9999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhc
Q 011291 177 RPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIA 256 (489)
Q Consensus 177 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~ 256 (489)
.||+....... +......+++++++++..++++++++.++-+|--.|++|..++|..+|++|.++||++
T Consensus 63 aPGqe~ga~~~-----------p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn 131 (283)
T PF03096_consen 63 APGQEEGAATL-----------PEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVN 131 (283)
T ss_dssp -TTTSTT----------------TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred CCCCCCCcccc-----------cccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEe
Confidence 99987654322 1123467999999999999999999999999999999999999999999999999999
Q ss_pred ccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 011291 257 PAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLR 336 (489)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (489)
+.....+.. . | .+.+.....+.
T Consensus 132 ~~~~~~gw~------------------------------E----------w------------------~~~K~~~~~L~ 153 (283)
T PF03096_consen 132 PTCTAAGWM------------------------------E----------W------------------FYQKLSSWLLY 153 (283)
T ss_dssp ---S---HH------------------------------H----------H------------------HHHHHH-----
T ss_pred cCCCCccHH------------------------------H----------H------------------HHHHHhccccc
Confidence 876443210 0 0 00000000000
Q ss_pred c-cccchhhhhhH-hhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCC
Q 011291 337 S-AVGVTLVRILI-DKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEIS 414 (489)
Q Consensus 337 ~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 414 (489)
. .........+. ..|+..... .. .++...|............+..+..... .+.++........
T Consensus 154 ~~gmt~~~~d~Ll~h~Fg~~~~~----~n----~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~------~R~DL~~~~~~~~ 219 (283)
T PF03096_consen 154 SYGMTSSVKDYLLWHYFGKEEEE----NN----SDLVQTYRQHLDERINPKNLALFLNSYN------SRTDLSIERPSLG 219 (283)
T ss_dssp --CTTS-HHHHHHHHHS-HHHHH----CT-----HHHHHHHHHHHT-TTHHHHHHHHHHHH------T-----SECTTCC
T ss_pred ccccccchHHhhhhccccccccc----cc----HHHHHHHHHHHhcCCCHHHHHHHHHHHh------ccccchhhcCCCC
Confidence 0 00000000000 011111100 01 1122222222211111222233333222 2235566667778
Q ss_pred ccEEEEecCCCCCCCchhHHHHHhhCC--CCEEEEecCCCCCCccccHHHHHHHHHHHHHHh
Q 011291 415 CPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 474 (489)
Q Consensus 415 ~PvLii~G~~D~~vp~~~~~~l~~~~~--~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~ 474 (489)
||+|++.|+..+.+. .+.++..++. +.+++.++++|=++..|+|..+.+.+.-||+..
T Consensus 220 c~vLlvvG~~Sp~~~--~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 220 CPVLLVVGDNSPHVD--DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp S-EEEEEETTSTTHH--HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred CCeEEEEecCCcchh--hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 999999999988764 5567777773 468999999999999999999999999999753
No 78
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.64 E-value=1.6e-14 Score=134.23 Aligned_cols=116 Identities=12% Similarity=0.136 Sum_probs=77.2
Q ss_pred eecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc-h-HHhhHHhHhhCCCeEEEeCCCCCC
Q 011291 104 EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS-W-NRAMKPLAKTTSSKVLAFDRPAFG 181 (489)
Q Consensus 104 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~-~-~~~~~~L~~~~G~~Vi~~D~~G~G 181 (489)
..||..+......+++.. ...+.+..|+||++||..+++.. | +.++..+.++ ||+|++++.||+|
T Consensus 100 ~~DGG~~~lDW~~~~~~~------------~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~-G~r~VVfN~RG~~ 166 (409)
T KOG1838|consen 100 TSDGGTVTLDWVENPDSR------------CRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRK-GYRVVVFNHRGLG 166 (409)
T ss_pred eCCCCEEEEeeccCcccc------------cCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhC-CcEEEEECCCCCC
Confidence 457888777665433100 00113456999999999776644 3 4566666665 9999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh----cCceEEEEEeCcchHHHHHHhhhhhh
Q 011291 182 LTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL----AAEKAILVGHSAGALVAVNSYFEAPE 247 (489)
Q Consensus 182 ~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~liGhS~Gg~ial~~a~~~p~ 247 (489)
.+.-.... .| ...+.+|+..+++++ ...++..+|.||||++.+.|..+..+
T Consensus 167 g~~LtTpr--------------~f-~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~ 221 (409)
T KOG1838|consen 167 GSKLTTPR--------------LF-TAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGD 221 (409)
T ss_pred CCccCCCc--------------ee-ecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccC
Confidence 98743221 12 223344555555544 45689999999999999999886543
No 79
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.63 E-value=6.3e-15 Score=126.55 Aligned_cols=226 Identities=16% Similarity=0.095 Sum_probs=138.8
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
+...-++++|=.|+++..|+.+...|... +.++++++||+|.--.. .-..+++++++.+..-+
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp~~--iel~avqlPGR~~r~~e---------------p~~~di~~Lad~la~el 67 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLPAD--IELLAVQLPGRGDRFGE---------------PLLTDIESLADELANEL 67 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCCch--hheeeecCCCcccccCC---------------cccccHHHHHHHHHHHh
Confidence 34567999999999999999999988775 89999999999876432 23468888888887777
Q ss_pred H-HhcCceEEEEEeCcchHHHHHHhhhhhh---HHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhh
Q 011291 219 D-ILAAEKAILVGHSAGALVAVNSYFEAPE---RVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPF 294 (489)
Q Consensus 219 ~-~l~~~~v~liGhS~Gg~ial~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (489)
. .+.-+++.++||||||++|.++|.+... ...++.+.+......... ...... .+ ..+
T Consensus 68 ~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~------~~i~~~-----~D-------~~~ 129 (244)
T COG3208 68 LPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRG------KQIHHL-----DD-------ADF 129 (244)
T ss_pred ccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCccc------CCccCC-----CH-------HHH
Confidence 6 3445689999999999999999987532 133444443322100000 000000 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhh
Q 011291 295 LKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGY 374 (489)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (489)
......+... ........++...++..+
T Consensus 130 l~~l~~lgG~----------------------------------------------------p~e~led~El~~l~LPil 157 (244)
T COG3208 130 LADLVDLGGT----------------------------------------------------PPELLEDPELMALFLPIL 157 (244)
T ss_pred HHHHHHhCCC----------------------------------------------------ChHHhcCHHHHHHHHHHH
Confidence 0000000000 000000111111111100
Q ss_pred cCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCC-CCEEEEecCCCC
Q 011291 375 TKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP-GSTFEVIKNCGH 453 (489)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~-~~~~~~i~g~gH 453 (489)
. +-+.... .+.... -..++||+.++.|++|..+..+....+.+... ..++.+|+| ||
T Consensus 158 R-----------------AD~~~~e---~Y~~~~-~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gH 215 (244)
T COG3208 158 R-----------------ADFRALE---SYRYPP-PAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GH 215 (244)
T ss_pred H-----------------HHHHHhc---ccccCC-CCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cc
Confidence 0 0000000 001111 15679999999999999999888888888876 679999996 99
Q ss_pred CCccccHHHHHHHHHHHHHH
Q 011291 454 VPQEEKVEEFVSIVARFLQR 473 (489)
Q Consensus 454 ~~~~e~p~~v~~~i~~fl~~ 473 (489)
+...++.+++...|.+.+..
T Consensus 216 Ffl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 216 FFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred eehhhhHHHHHHHHHHHhhh
Confidence 99999999999999888864
No 80
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.63 E-value=6.2e-14 Score=122.38 Aligned_cols=271 Identities=21% Similarity=0.237 Sum_probs=166.8
Q ss_pred CceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc-hHHh-----hHHhHhhCCCeEE
Q 011291 100 SCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS-WNRA-----MKPLAKTTSSKVL 173 (489)
Q Consensus 100 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~-~~~~-----~~~L~~~~G~~Vi 173 (489)
.+.+...-..+++..+|.+ .+++|.+|-.|..+.+... |..+ +..+.++ |.|+
T Consensus 24 e~~V~T~~G~v~V~V~Gd~-------------------~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~--fcv~ 82 (326)
T KOG2931|consen 24 EHDVETAHGVVHVTVYGDP-------------------KGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH--FCVY 82 (326)
T ss_pred eeeeccccccEEEEEecCC-------------------CCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh--eEEE
Confidence 3344445577999999977 3467889999999987655 5543 4566665 9999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHH
Q 011291 174 AFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALI 253 (489)
Q Consensus 174 ~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lv 253 (489)
-+|.|||-.....- +......++++++++|..++++++.+.|+-+|--.|++|..++|..||++|-+||
T Consensus 83 HV~~PGqe~gAp~~-----------p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLv 151 (326)
T KOG2931|consen 83 HVDAPGQEDGAPSF-----------PEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLV 151 (326)
T ss_pred ecCCCccccCCccC-----------CCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEE
Confidence 99999986543221 1123467999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 011291 254 LIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSA 333 (489)
Q Consensus 254 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (489)
|+++....... -.|..-.....++..- .+.....+. +..+
T Consensus 152 LIn~~~~a~gw-------------------------------iew~~~K~~s~~l~~~--Gmt~~~~d~---ll~H---- 191 (326)
T KOG2931|consen 152 LINCDPCAKGW-------------------------------IEWAYNKVSSNLLYYY--GMTQGVKDY---LLAH---- 191 (326)
T ss_pred EEecCCCCchH-------------------------------HHHHHHHHHHHHHHhh--chhhhHHHH---HHHH----
Confidence 99976543311 0011111110000000 000000000 0000
Q ss_pred hhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcc--
Q 011291 334 TLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLH-- 411 (489)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 411 (489)
.|+... ..... ++...|+..+...-....+..+..+.... .|+.....
T Consensus 192 ----------------~Fg~e~----~~~~~----diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R------~DL~~~r~~~ 241 (326)
T KOG2931|consen 192 ----------------HFGKEE----LGNNS----DIVQEYRQHLGERLNPKNLALFLNAYNGR------RDLSIERPKL 241 (326)
T ss_pred ----------------Hhcccc----ccccH----HHHHHHHHHHHhcCChhHHHHHHHHhcCC------CCccccCCCc
Confidence 010000 00111 22222222222111122222222222221 12222222
Q ss_pred --cCCccEEEEecCCCCCCCchhHHHHHhhC--CCCEEEEecCCCCCCccccHHHHHHHHHHHHHHh
Q 011291 412 --EISCPVLIVTGDTDRIVPSWNAERLSRAI--PGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 474 (489)
Q Consensus 412 --~i~~PvLii~G~~D~~vp~~~~~~l~~~~--~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~ 474 (489)
.++||||++.|++.+.+. ....+...+ .+.+++.+.++|-.++.++|..+.+.+.-||+..
T Consensus 242 ~~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 242 GTTLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred CccccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 567999999999988764 445555555 2578999999999999999999999999999864
No 81
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.63 E-value=2.6e-14 Score=133.33 Aligned_cols=246 Identities=22% Similarity=0.239 Sum_probs=135.2
Q ss_pred CceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCC
Q 011291 100 SCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPA 179 (489)
Q Consensus 100 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G 179 (489)
..+...+|..|+.+++.|.+ +.++-|.||.+||.++....|...+. ++.. ||.|+.+|.||
T Consensus 59 v~f~s~~g~~V~g~l~~P~~-----------------~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~-G~~vl~~d~rG 119 (320)
T PF05448_consen 59 VSFESFDGSRVYGWLYRPKN-----------------AKGKLPAVVQFHGYGGRSGDPFDLLP-WAAA-GYAVLAMDVRG 119 (320)
T ss_dssp EEEEEGGGEEEEEEEEEES------------------SSSSEEEEEEE--TT--GGGHHHHHH-HHHT-T-EEEEE--TT
T ss_pred EEEEccCCCEEEEEEEecCC-----------------CCCCcCEEEEecCCCCCCCCcccccc-cccC-CeEEEEecCCC
Confidence 45555689999999998762 13567889999999998777765543 5664 99999999999
Q ss_pred CCCCCCCCCC-C--CCCCC-cCCCCC-CCCCChHHHHHHHHHHHHHh------cCceEEEEEeCcchHHHHHHhhhhhhH
Q 011291 180 FGLTSRVFPF-Q--QPTPD-TENKKP-LNPYSMAFSVLATLYFIDIL------AAEKAILVGHSAGALVAVNSYFEAPER 248 (489)
Q Consensus 180 ~G~S~~~~~~-~--~~~~~-~~~~~~-~~~~~~~~~~~dl~~~l~~l------~~~~v~liGhS~Gg~ial~~a~~~p~~ 248 (489)
+|........ . ..... ...... .+.+-+..+..|....++.+ +.+++.+.|.|+||.+++.+|+..+ +
T Consensus 120 qg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-r 198 (320)
T PF05448_consen 120 QGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-R 198 (320)
T ss_dssp TSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T
T ss_pred CCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-c
Confidence 9933221111 0 00000 011111 33344445556665555544 3469999999999999999888876 6
Q ss_pred HHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 011291 249 VAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYK 328 (489)
Q Consensus 249 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
|++++...|....- ...+..-.. .+
T Consensus 199 v~~~~~~vP~l~d~--------------------------------~~~~~~~~~-------------~~---------- 223 (320)
T PF05448_consen 199 VKAAAADVPFLCDF--------------------------------RRALELRAD-------------EG---------- 223 (320)
T ss_dssp -SEEEEESESSSSH--------------------------------HHHHHHT---------------ST----------
T ss_pred ccEEEecCCCccch--------------------------------hhhhhcCCc-------------cc----------
Confidence 99888887754221 110000000 00
Q ss_pred HHHhhhhhccccchhhhhhHhhhhhHHHHHhhc--Cc-hhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCch
Q 011291 329 KVLSATLRSAVGVTLVRILIDKFGLAAVRRAWY--NS-KEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPP 405 (489)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (489)
....+...+. ++ ..-.+++.+.+ .-.|
T Consensus 224 -----------------------~y~~~~~~~~~~d~~~~~~~~v~~~L---------------------------~Y~D 253 (320)
T PF05448_consen 224 -----------------------PYPEIRRYFRWRDPHHEREPEVFETL---------------------------SYFD 253 (320)
T ss_dssp -----------------------TTHHHHHHHHHHSCTHCHHHHHHHHH---------------------------HTT-
T ss_pred -----------------------cHHHHHHHHhccCCCcccHHHHHHHH---------------------------hhhh
Confidence 0000000000 00 00111111110 0125
Q ss_pred hhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCC-CCEEEEecCCCCCCccccHHHH-HHHHHHHHHHh
Q 011291 406 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP-GSTFEVIKNCGHVPQEEKVEEF-VSIVARFLQRA 474 (489)
Q Consensus 406 ~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~-~~~~~~i~g~gH~~~~e~p~~v-~~~i~~fl~~~ 474 (489)
......+|+|||++-.|-.|.++||+....+.+.++ ..++.+++..||... .++ .+...+||.++
T Consensus 254 ~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~----~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 254 AVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYG----PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTT----HHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCch----hhHHHHHHHHHHhcC
Confidence 566678899999999999999999999999998886 468999999999654 333 66788888764
No 82
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.62 E-value=1.4e-14 Score=118.67 Aligned_cols=61 Identities=25% Similarity=0.329 Sum_probs=49.8
Q ss_pred cccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHH
Q 011291 410 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 472 (489)
Q Consensus 410 l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~ 472 (489)
+....+|+++|+|+.|.+++....-.+++. ...+++++++++|+++ .+-..+.+.|.+||.
T Consensus 145 l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 145 LAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred ccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceec-ccHHHHHHHHHHHhh
Confidence 345578999999999999988776666665 4678999999999987 456778999999995
No 83
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.60 E-value=1.5e-14 Score=135.47 Aligned_cols=123 Identities=16% Similarity=0.111 Sum_probs=79.8
Q ss_pred eeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhh-HHhHhhCCCeEEEeCCCCCC
Q 011291 103 CEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAM-KPLAKTTSSKVLAFDRPAFG 181 (489)
Q Consensus 103 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~-~~L~~~~G~~Vi~~D~~G~G 181 (489)
+...|..|..+...|+. .++.|+||++-|+-+...++..++ +.|+.+ |+.++++|.||.|
T Consensus 170 iP~eg~~I~g~LhlP~~------------------~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~r-GiA~LtvDmPG~G 230 (411)
T PF06500_consen 170 IPFEGKTIPGYLHLPSG------------------EKPYPTVIVCGGLDSLQEDLYRLFRDYLAPR-GIAMLTVDMPGQG 230 (411)
T ss_dssp EEETTCEEEEEEEESSS------------------SS-EEEEEEE--TTS-GGGGHHHHHCCCHHC-T-EEEEE--TTSG
T ss_pred EeeCCcEEEEEEEcCCC------------------CCCCCEEEEeCCcchhHHHHHHHHHHHHHhC-CCEEEEEccCCCc
Confidence 44567777777776651 344567777777777776655544 568886 9999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh---cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccc
Q 011291 182 LTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL---AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 258 (489)
Q Consensus 182 ~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~ 258 (489)
.|.+.+. ..+.+.+-..+.+.+... +..+|.++|.|+||++|+++|..+++|++++|.++++
T Consensus 231 ~s~~~~l---------------~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 231 ESPKWPL---------------TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAP 295 (411)
T ss_dssp GGTTT-S----------------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES--
T ss_pred ccccCCC---------------CcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCch
Confidence 9964221 112233444454555443 4569999999999999999999888899999999987
Q ss_pred c
Q 011291 259 I 259 (489)
Q Consensus 259 ~ 259 (489)
.
T Consensus 296 v 296 (411)
T PF06500_consen 296 V 296 (411)
T ss_dssp -
T ss_pred H
Confidence 5
No 84
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.60 E-value=5.3e-14 Score=125.80 Aligned_cols=206 Identities=19% Similarity=0.168 Sum_probs=145.5
Q ss_pred eecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCC-CCC
Q 011291 104 EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPA-FGL 182 (489)
Q Consensus 104 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G-~G~ 182 (489)
..++..+..+...|.. .+..|.||++|++.+-....+.+.+.|+.. ||.|+++|+-+ .|.
T Consensus 8 ~~~~~~~~~~~a~P~~------------------~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~-Gy~v~~Pdl~~~~~~ 68 (236)
T COG0412 8 PAPDGELPAYLARPAG------------------AGGFPGVIVLHEIFGLNPHIRDVARRLAKA-GYVVLAPDLYGRQGD 68 (236)
T ss_pred eCCCceEeEEEecCCc------------------CCCCCEEEEEecccCCchHHHHHHHHHHhC-CcEEEechhhccCCC
Confidence 3345677777776651 233488999999999999999999999996 99999999976 333
Q ss_pred CCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc------CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhc
Q 011291 183 TSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA------AEKAILVGHSAGALVAVNSYFEAPERVAALILIA 256 (489)
Q Consensus 183 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~------~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~ 256 (489)
+....... ...... .....+..+...|+.+.++.+. .++|.++|+||||.+++.++...| .|++.+..-
T Consensus 69 ~~~~~~~~---~~~~~~-~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fy 143 (236)
T COG0412 69 PTDIEDEP---AELETG-LVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFY 143 (236)
T ss_pred CCcccccH---HHHhhh-hhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEec
Confidence 33211000 000000 1112333677778888877763 468999999999999999998877 577777776
Q ss_pred ccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 011291 257 PAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLR 336 (489)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (489)
+.....
T Consensus 144 g~~~~~-------------------------------------------------------------------------- 149 (236)
T COG0412 144 GGLIAD-------------------------------------------------------------------------- 149 (236)
T ss_pred CCCCCC--------------------------------------------------------------------------
Confidence 543211
Q ss_pred ccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhcCcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCcc
Q 011291 337 SAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCP 416 (489)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 416 (489)
......++++|
T Consensus 150 ---------------------------------------------------------------------~~~~~~~~~~p 160 (236)
T COG0412 150 ---------------------------------------------------------------------DTADAPKIKVP 160 (236)
T ss_pred ---------------------------------------------------------------------cccccccccCc
Confidence 01113578999
Q ss_pred EEEEecCCCCCCCchhHHHHHhhCC----CCEEEEecCCCCCCcccc-----------HHHHHHHHHHHHHHhhC
Q 011291 417 VLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQEEK-----------VEEFVSIVARFLQRAFG 476 (489)
Q Consensus 417 vLii~G~~D~~vp~~~~~~l~~~~~----~~~~~~i~g~gH~~~~e~-----------p~~v~~~i~~fl~~~~~ 476 (489)
+|+++|+.|..+|....+.+.+.+. +.++.+|+++.|.++.+. .+.-++.+.+||++++.
T Consensus 161 vl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 161 VLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred EEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999887777776663 468899999999776431 26678888899988764
No 85
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.59 E-value=2.2e-14 Score=127.64 Aligned_cols=115 Identities=11% Similarity=-0.001 Sum_probs=74.9
Q ss_pred CCCCcEEEEccCCCCccchHH--hhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCC-CCCCCChHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNR--AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKK-PLNPYSMAFSVLATL 215 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~--~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dl~ 215 (489)
++.|.||++||++++...|.. -...++++.||.|+++|++|++.+.... .|..... ........++.+.+.
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~ 84 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCW------DWFFTHHRARGTGEVESLHQLID 84 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCC------CCCCccccCCCCccHHHHHHHHH
Confidence 356899999999988776641 1334444459999999999998654211 0110000 011112222222233
Q ss_pred HHHHHh--cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 216 YFIDIL--AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 216 ~~l~~l--~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
.+.+.. +.++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 85 ~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 85 AVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 333333 33589999999999999999999999999998888754
No 86
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.57 E-value=1e-13 Score=119.54 Aligned_cols=140 Identities=21% Similarity=0.236 Sum_probs=96.4
Q ss_pred CceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCC
Q 011291 100 SCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPA 179 (489)
Q Consensus 100 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G 179 (489)
..|...+|.+|+.++.-|.. +.++-|.||-.||.++....|..++. ++. .||.|+.+|-||
T Consensus 59 vTf~g~~g~rI~gwlvlP~~-----------------~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~-~Gyavf~MdvRG 119 (321)
T COG3458 59 VTFTGYGGARIKGWLVLPRH-----------------EKGKLPAVVQFHGYGGRGGEWHDMLH-WAV-AGYAVFVMDVRG 119 (321)
T ss_pred EEEeccCCceEEEEEEeecc-----------------cCCccceEEEEeeccCCCCCcccccc-ccc-cceeEEEEeccc
Confidence 34555688999999988862 13567899999999999988866655 444 399999999999
Q ss_pred CCCCCC----CCCC-CCCCCCcCCCCC-CCCCChHHHHHHHHHHHHHh------cCceEEEEEeCcchHHHHHHhhhhhh
Q 011291 180 FGLTSR----VFPF-QQPTPDTENKKP-LNPYSMAFSVLATLYFIDIL------AAEKAILVGHSAGALVAVNSYFEAPE 247 (489)
Q Consensus 180 ~G~S~~----~~~~-~~~~~~~~~~~~-~~~~~~~~~~~dl~~~l~~l------~~~~v~liGhS~Gg~ial~~a~~~p~ 247 (489)
.|.|.. ++.. ..+........+ ...|-+.....|+..+++.+ +.++|.+.|.|.||.+++.+++..|
T Consensus 120 Qg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~- 198 (321)
T COG3458 120 QGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP- 198 (321)
T ss_pred CCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-
Confidence 998843 2211 011111111111 23344455555555555543 5579999999999999998888776
Q ss_pred HHHhHHhhcccc
Q 011291 248 RVAALILIAPAI 259 (489)
Q Consensus 248 ~v~~lvl~~~~~ 259 (489)
++++++++-|..
T Consensus 199 rik~~~~~~Pfl 210 (321)
T COG3458 199 RIKAVVADYPFL 210 (321)
T ss_pred hhhccccccccc
Confidence 799999887764
No 87
>PRK10162 acetyl esterase; Provisional
Probab=99.57 E-value=2.2e-13 Score=128.60 Aligned_cols=102 Identities=21% Similarity=0.204 Sum_probs=71.6
Q ss_pred CCCcEEEEccCC---CCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHH-
Q 011291 140 IGFPMVLFHGFG---ASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL- 215 (489)
Q Consensus 140 ~~p~VlllHG~~---~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~- 215 (489)
..|.||++||++ ++...|..++..|+...|+.|+.+|+|...... ....++|..+.+.
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~------------------~p~~~~D~~~a~~~ 141 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR------------------FPQAIEEIVAVCCY 141 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC------------------CCCcHHHHHHHHHH
Confidence 458899999987 555668888889988669999999999644322 1112333333333
Q ss_pred --HHHHHhcC--ceEEEEEeCcchHHHHHHhhhh------hhHHHhHHhhcccc
Q 011291 216 --YFIDILAA--EKAILVGHSAGALVAVNSYFEA------PERVAALILIAPAI 259 (489)
Q Consensus 216 --~~l~~l~~--~~v~liGhS~Gg~ial~~a~~~------p~~v~~lvl~~~~~ 259 (489)
...+.+++ ++++|+|+|+||.+++.++... +.++.++|++.|..
T Consensus 142 l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 142 FHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 33334544 5899999999999999888754 24688888887754
No 88
>PRK10115 protease 2; Provisional
Probab=99.56 E-value=4.4e-14 Score=145.79 Aligned_cols=136 Identities=15% Similarity=0.032 Sum_probs=96.9
Q ss_pred CceeeecceEEEE-EeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCcc--chHHhhHHhHhhCCCeEEEeC
Q 011291 100 SCFCEFNGVHLHY-KVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVF--SWNRAMKPLAKTTSSKVLAFD 176 (489)
Q Consensus 100 ~~~~~~~g~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~--~~~~~~~~L~~~~G~~Vi~~D 176 (489)
..+...||.+|.+ ..+.+.. ...++.|.||++||+++... .|......|+.+ ||.|+.++
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~----------------~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~r-G~~v~~~n 481 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKH----------------FRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDR-GFVYAIVH 481 (686)
T ss_pred EEEECCCCCEEEEEEEEECCC----------------CCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHC-CcEEEEEE
Confidence 3444579999997 4444431 01245699999999887764 366667788886 99999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCC-CCCCCCCChHHHHHHHHHHHHH--hcCceEEEEEeCcchHHHHHHhhhhhhHHHhHH
Q 011291 177 RPAFGLTSRVFPFQQPTPDTEN-KKPLNPYSMAFSVLATLYFIDI--LAAEKAILVGHSAGALVAVNSYFEAPERVAALI 253 (489)
Q Consensus 177 ~~G~G~S~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dl~~~l~~--l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lv 253 (489)
.||-|.=.+. |... .......+++|+++.+..+++. .+.+++.+.|.|.||+++..++.++|++++++|
T Consensus 482 ~RGs~g~G~~--------w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v 553 (686)
T PRK10115 482 VRGGGELGQQ--------WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVI 553 (686)
T ss_pred cCCCCccCHH--------HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEE
Confidence 9985543321 0000 1122336777777777777655 245799999999999999988888999999999
Q ss_pred hhccccc
Q 011291 254 LIAPAIL 260 (489)
Q Consensus 254 l~~~~~~ 260 (489)
+..|...
T Consensus 554 ~~vp~~D 560 (686)
T PRK10115 554 AQVPFVD 560 (686)
T ss_pred ecCCchh
Confidence 9988753
No 89
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.54 E-value=3.9e-13 Score=120.80 Aligned_cols=131 Identities=21% Similarity=0.254 Sum_probs=107.2
Q ss_pred eeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhC--------CCeEE
Q 011291 102 FCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTT--------SSKVL 173 (489)
Q Consensus 102 ~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~--------G~~Vi 173 (489)
-..+.|.+||+....|+. .....+-.|+|++|||+|+-..|..+++.|.... -|.||
T Consensus 128 kTeIeGL~iHFlhvk~p~---------------~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI 192 (469)
T KOG2565|consen 128 KTEIEGLKIHFLHVKPPQ---------------KKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVI 192 (469)
T ss_pred hhhhcceeEEEEEecCCc---------------cccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEe
Confidence 345789999999987761 0112233589999999999999999998887631 37899
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHH
Q 011291 174 AFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALI 253 (489)
Q Consensus 174 ~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lv 253 (489)
++.+||+|.|+.+. ...+...+.+.-+..++=.+|.+++.|-|..||+.|+..+|..+|+.|.++-
T Consensus 193 ~PSlPGygwSd~~s--------------k~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 193 APSLPGYGWSDAPS--------------KTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred ccCCCCcccCcCCc--------------cCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 99999999999654 3457888888889999999999999999999999999999999999999987
Q ss_pred hhcccccC
Q 011291 254 LIAPAILA 261 (489)
Q Consensus 254 l~~~~~~~ 261 (489)
+-.+...+
T Consensus 259 lnm~~~~s 266 (469)
T KOG2565|consen 259 LNMCFVNS 266 (469)
T ss_pred hcccccCC
Confidence 76554433
No 90
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.52 E-value=2.7e-14 Score=127.32 Aligned_cols=112 Identities=21% Similarity=0.219 Sum_probs=62.6
Q ss_pred CCCCcEEEEccCCCCccchHHhhH-HhHhhCCCeEEEeCCCC------CCCCCCCCCCCCCCCCcCCC--CCC---CCCC
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMK-PLAKTTSSKVLAFDRPA------FGLTSRVFPFQQPTPDTENK--KPL---NPYS 206 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~-~L~~~~G~~Vi~~D~~G------~G~S~~~~~~~~~~~~~~~~--~~~---~~~~ 206 (489)
...+.||++||.|.+...|..... .+.. ....++.++-|- .|... ..|.+.. ... ....
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~-~~~~~i~p~ap~~~~~~~~g~~~--------~~Wf~~~~~~~~~~~~~~~ 82 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLAL-PNTRFISPRAPSRPVTVPGGYRM--------PAWFDIYDFDPEGPEDEAG 82 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCS-TTEEEEEE---EEE-GGGTT-EE--------E-SS-BSCSSSSSEB-HHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccC-CceEEEeccCCCCCcccccccCC--------CceeeccCCCcchhhhHHH
Confidence 356889999999999866655444 2222 256777776542 12210 0011100 000 1122
Q ss_pred hHHHHHHHHHHHHHh-----cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 207 MAFSVLATLYFIDIL-----AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 207 ~~~~~~dl~~~l~~l-----~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
+...++.+..+++.. +.++++++|+|.||++++.++.++|+.+.++|.+++..
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~ 140 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYL 140 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccc
Confidence 333344455555542 44689999999999999999999999999999999764
No 91
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.51 E-value=2.8e-13 Score=137.83 Aligned_cols=120 Identities=13% Similarity=0.073 Sum_probs=92.5
Q ss_pred ecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCcc---ch-HHhhHHhHhhCCCeEEEeCCCCC
Q 011291 105 FNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVF---SW-NRAMKPLAKTTSSKVLAFDRPAF 180 (489)
Q Consensus 105 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~---~~-~~~~~~L~~~~G~~Vi~~D~~G~ 180 (489)
.||.+|++..+.|.+ .++.|+||++||++.+.. .+ ......|+++ ||.|+++|+||+
T Consensus 4 ~DG~~L~~~~~~P~~------------------~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~-Gy~vv~~D~RG~ 64 (550)
T TIGR00976 4 RDGTRLAIDVYRPAG------------------GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQ-GYAVVIQDTRGR 64 (550)
T ss_pred CCCCEEEEEEEecCC------------------CCCCCEEEEecCCCCchhhccccccccHHHHHhC-CcEEEEEecccc
Confidence 478999998887751 235689999999987653 12 2245677786 999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcC-----ceEEEEEeCcchHHHHHHhhhhhhHHHhHHhh
Q 011291 181 GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA-----EKAILVGHSAGALVAVNSYFEAPERVAALILI 255 (489)
Q Consensus 181 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-----~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~ 255 (489)
|.|+... ..++ ...++|+.++++++.. .+|+++|||+||.+++.+|..+|++++++|..
T Consensus 65 g~S~g~~---------------~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~ 128 (550)
T TIGR00976 65 GASEGEF---------------DLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQ 128 (550)
T ss_pred ccCCCce---------------EecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeec
Confidence 9998532 1122 4567777777777632 58999999999999999999999999999988
Q ss_pred cccc
Q 011291 256 APAI 259 (489)
Q Consensus 256 ~~~~ 259 (489)
++..
T Consensus 129 ~~~~ 132 (550)
T TIGR00976 129 EGVW 132 (550)
T ss_pred Cccc
Confidence 8764
No 92
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.50 E-value=1.7e-12 Score=126.63 Aligned_cols=103 Identities=13% Similarity=0.113 Sum_probs=83.9
Q ss_pred CCCcEEEEccCCCCccch-----HHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSW-----NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLAT 214 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~-----~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 214 (489)
..+|||+++.+-.-.+.| +.+++.|.++ ||.|+++|+++-+... ...+++++++.+
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~q-G~~VflIsW~nP~~~~------------------r~~~ldDYv~~i 274 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKN-QLQVFIISWRNPDKAH------------------REWGLSTYVDAL 274 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHc-CCeEEEEeCCCCChhh------------------cCCCHHHHHHHH
Confidence 468999999998666666 4689999997 9999999999866554 456788888777
Q ss_pred HHHHHHh----cCceEEEEEeCcchHHHHH----Hhhhhhh-HHHhHHhhcccccC
Q 011291 215 LYFIDIL----AAEKAILVGHSAGALVAVN----SYFEAPE-RVAALILIAPAILA 261 (489)
Q Consensus 215 ~~~l~~l----~~~~v~liGhS~Gg~ial~----~a~~~p~-~v~~lvl~~~~~~~ 261 (489)
...++.+ +.+++.++|||+||.++.. +++++++ +|++++++.+....
T Consensus 275 ~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 275 KEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 7666654 6789999999999999997 7788885 79999999887653
No 93
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.48 E-value=2e-12 Score=122.40 Aligned_cols=146 Identities=20% Similarity=0.146 Sum_probs=97.8
Q ss_pred CCCCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHh------hHHhHhhCC
Q 011291 96 ADPDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRA------MKPLAKTTS 169 (489)
Q Consensus 96 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~------~~~L~~~~G 169 (489)
+.+++...+.||..+........ .+++|+|++.||+-+++..|-.. .-.|++ +|
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~-------------------~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~Lad-aG 106 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRG-------------------KKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLAD-AG 106 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCC-------------------CCCCCcEEEeeccccccccceecCccccHHHHHHH-cC
Confidence 34445556678886666555333 25789999999999999998543 334555 59
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhh--
Q 011291 170 SKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPE-- 247 (489)
Q Consensus 170 ~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~-- 247 (489)
|+|+.-+.||.-.|.+...........-+...+......|+.+.|..+++..+.++++.+|||.|+.+...++...|+
T Consensus 107 YDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~ 186 (403)
T KOG2624|consen 107 YDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYN 186 (403)
T ss_pred CceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhh
Confidence 999999999988887653331000111111122222333344444555555677899999999999999988887765
Q ss_pred -HHHhHHhhcccccC
Q 011291 248 -RVAALILIAPAILA 261 (489)
Q Consensus 248 -~v~~lvl~~~~~~~ 261 (489)
+|+..++++|+...
T Consensus 187 ~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 187 KKIKSFIALAPAAFP 201 (403)
T ss_pred hhhheeeeecchhhh
Confidence 78999999998743
No 94
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.48 E-value=1.1e-12 Score=124.54 Aligned_cols=103 Identities=11% Similarity=0.119 Sum_probs=82.4
Q ss_pred CcEEEEccCCCCccch-HHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH
Q 011291 142 FPMVLFHGFGASVFSW-NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 220 (489)
Q Consensus 142 p~VlllHG~~~~~~~~-~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~ 220 (489)
|+||++..+.++...+ +.+++.|.. |+.|+..|+..-+..+. ..+.++++|+++-+..++++
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~--g~dVYl~DW~~p~~vp~---------------~~~~f~ldDYi~~l~~~i~~ 165 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP--DHDVYITDWVNARMVPL---------------SAGKFDLEDYIDYLIEFIRF 165 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC--CCcEEEEeCCCCCCCch---------------hcCCCCHHHHHHHHHHHHHH
Confidence 7999999888766554 456777776 89999999976664421 23668999999889999999
Q ss_pred hcCceEEEEEeCcchHHHHHHhhhh-----hhHHHhHHhhcccccCc
Q 011291 221 LAAEKAILVGHSAGALVAVNSYFEA-----PERVAALILIAPAILAP 262 (489)
Q Consensus 221 l~~~~v~liGhS~Gg~ial~~a~~~-----p~~v~~lvl~~~~~~~~ 262 (489)
+|.+ ++++|+|+||.+++.+++.. |.+++++++++++....
T Consensus 166 ~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 166 LGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred hCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 9877 99999999999988776655 56799999999887543
No 95
>COG0400 Predicted esterase [General function prediction only]
Probab=99.48 E-value=1.1e-12 Score=113.29 Aligned_cols=111 Identities=16% Similarity=0.165 Sum_probs=71.0
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHH--
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY-- 216 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~-- 216 (489)
...|+||++||.|++...+.+....+..+ +.++.+.-+ ........ .. .......++.+++..+...
T Consensus 16 p~~~~iilLHG~Ggde~~~~~~~~~~~P~--~~~is~rG~----v~~~g~~~--~f---~~~~~~~~d~edl~~~~~~~~ 84 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVPLPELILPN--ATLVSPRGP----VAENGGPR--FF---RRYDEGSFDQEDLDLETEKLA 84 (207)
T ss_pred CCCcEEEEEecCCCChhhhhhhhhhcCCC--CeEEcCCCC----ccccCccc--ce---eecCCCccchhhHHHHHHHHH
Confidence 34578999999999988887755555553 555554321 11110000 00 0112233444444444333
Q ss_pred -----HHHHhcC--ceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 217 -----FIDILAA--EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 217 -----~l~~l~~--~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
+.+..++ ++++++|+|-|+++++.+..++|+.++++|++++...
T Consensus 85 ~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~ 135 (207)
T COG0400 85 EFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLP 135 (207)
T ss_pred HHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCC
Confidence 3334455 7999999999999999999999999999999998753
No 96
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.44 E-value=3.2e-13 Score=129.53 Aligned_cols=106 Identities=18% Similarity=0.149 Sum_probs=81.0
Q ss_pred CCCcEEEEccCCCCc--cchHH-hhHHhHhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASV--FSWNR-AMKPLAKT-TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL 215 (489)
Q Consensus 140 ~~p~VlllHG~~~~~--~~~~~-~~~~L~~~-~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~ 215 (489)
++|++|+|||++.+. ..|.. +...|... ..|+||++|++|+|.+..+. ........++++.
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~---------------a~~~t~~vg~~la 104 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT---------------SAAYTKLVGKDVA 104 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc---------------ccccHHHHHHHHH
Confidence 468999999998754 34665 55555432 15999999999999886431 1123356667777
Q ss_pred HHHHHh------cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 216 YFIDIL------AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 216 ~~l~~l------~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
++++.+ +.++++||||||||.+|..++..+|++|.+|++++|+..
T Consensus 105 ~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 105 KFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 777765 368999999999999999999989999999999998753
No 97
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.42 E-value=1.9e-11 Score=111.74 Aligned_cols=110 Identities=24% Similarity=0.294 Sum_probs=91.0
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhh--CCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKT--TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~--~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
..+|+|+|.||-.+.|..++..|.+. ..+.|+++.+.||-.++..... ......+++++.++...++++
T Consensus 3 ~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~---------~~~~~~~sL~~QI~hk~~~i~ 73 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKF---------SPNGRLFSLQDQIEHKIDFIK 73 (266)
T ss_pred EEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccc---------cCCCCccCHHHHHHHHHHHHH
Confidence 57899999999999999999988865 3799999999999887754211 123577999999998888887
Q ss_pred Hhc------CceEEEEEeCcchHHHHHHhhhhh---hHHHhHHhhccccc
Q 011291 220 ILA------AEKAILVGHSAGALVAVNSYFEAP---ERVAALILIAPAIL 260 (489)
Q Consensus 220 ~l~------~~~v~liGhS~Gg~ial~~a~~~p---~~v~~lvl~~~~~~ 260 (489)
.+- ..+++++|||.|++++++++.+.+ .+|.+++++-|...
T Consensus 74 ~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 74 ELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred HHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 652 357999999999999999999998 68999999988753
No 98
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.42 E-value=9e-12 Score=98.58 Aligned_cols=110 Identities=23% Similarity=0.177 Sum_probs=77.4
Q ss_pred cEEEEccCCCCccc--hHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH
Q 011291 143 PMVLFHGFGASVFS--WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 220 (489)
Q Consensus 143 ~VlllHG~~~~~~~--~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~ 220 (489)
+||+-||.+.+.+. ...++..|+.+ |+.|..|+++..-....... .+.+....-..++...+.++.+.
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~-G~~vaRfefpYma~Rrtg~r---------kPp~~~~t~~~~~~~~~aql~~~ 85 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARR-GWLVARFEFPYMAARRTGRR---------KPPPGSGTLNPEYIVAIAQLRAG 85 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhC-ceeEEEeecchhhhccccCC---------CCcCccccCCHHHHHHHHHHHhc
Confidence 58899999887655 56678889986 99999999986432211100 01122233445666777788888
Q ss_pred hcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCc
Q 011291 221 LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAP 262 (489)
Q Consensus 221 l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~ 262 (489)
+...+.++-|+||||-++..++..-.-.|+++++++-+..++
T Consensus 86 l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhpp 127 (213)
T COG3571 86 LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPP 127 (213)
T ss_pred ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCC
Confidence 877799999999999999988765544589999887554433
No 99
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.41 E-value=7.4e-13 Score=95.89 Aligned_cols=79 Identities=24% Similarity=0.291 Sum_probs=67.6
Q ss_pred ceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCC
Q 011291 107 GVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRV 186 (489)
Q Consensus 107 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~ 186 (489)
|.+|+++.|.|++ ..+.+|+++||++.++..|..+++.|+++ ||.|+++|+||||.|+..
T Consensus 1 G~~L~~~~w~p~~-------------------~~k~~v~i~HG~~eh~~ry~~~a~~L~~~-G~~V~~~D~rGhG~S~g~ 60 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-------------------PPKAVVVIVHGFGEHSGRYAHLAEFLAEQ-GYAVFAYDHRGHGRSEGK 60 (79)
T ss_pred CcEEEEEEecCCC-------------------CCCEEEEEeCCcHHHHHHHHHHHHHHHhC-CCEEEEECCCcCCCCCCc
Confidence 6789999998872 23678999999999999999999999997 999999999999999842
Q ss_pred CCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 187 FPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
.....+++++++|+..+++
T Consensus 61 --------------rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 --------------RGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred --------------ccccCCHHHHHHHHHHHhC
Confidence 2345688999999988864
No 100
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.41 E-value=3.3e-12 Score=107.62 Aligned_cols=115 Identities=19% Similarity=0.157 Sum_probs=78.3
Q ss_pred eecceEEEEEeccCccccccccccccCCCCCCCcCCCCC-cEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCC
Q 011291 104 EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGF-PMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGL 182 (489)
Q Consensus 104 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~ 182 (489)
-.||..+....+... ++.+ -|++-.+.+-....|+.++..+++. ||.|+.+|+||.|.
T Consensus 12 ~~DG~~l~~~~~pA~--------------------~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~-Gf~Vlt~dyRG~g~ 70 (281)
T COG4757 12 APDGYSLPGQRFPAD--------------------GKASGRLVVAGATGVGQYFYRRFAAAAAKA-GFEVLTFDYRGIGQ 70 (281)
T ss_pred cCCCccCccccccCC--------------------CCCCCcEEecccCCcchhHhHHHHHHhhcc-CceEEEEecccccC
Confidence 457888888877654 2334 3444444555556778888888885 99999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCCCCCCChHHHHH-HHHHHHHHh----cCceEEEEEeCcchHHHHHHhhhhhhHHHhHH
Q 011291 183 TSRVFPFQQPTPDTENKKPLNPYSMAFSVL-ATLYFIDIL----AAEKAILVGHSAGALVAVNSYFEAPERVAALI 253 (489)
Q Consensus 183 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dl~~~l~~l----~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lv 253 (489)
|+..... ...+.+.|++. |+.+.++.+ ...+.+.||||+||.+.- ++..++ ++.+..
T Consensus 71 S~p~~~~------------~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L~~~~~-k~~a~~ 132 (281)
T COG4757 71 SRPASLS------------GSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALG-LLGQHP-KYAAFA 132 (281)
T ss_pred CCccccc------------cCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeec-ccccCc-ccceee
Confidence 9865433 24456666664 666666555 345899999999999765 444555 344333
No 101
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.40 E-value=8.6e-13 Score=111.52 Aligned_cols=89 Identities=28% Similarity=0.361 Sum_probs=59.9
Q ss_pred EEEEccCCCCc-cchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc
Q 011291 144 MVLFHGFGASV-FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 222 (489)
Q Consensus 144 VlllHG~~~~~-~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~ 222 (489)
|+++||++++. ..|....+.-.+.. ++|-.+|+ + ..+.+++...+...+..++
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~-------------------~P~~~~W~~~l~~~i~~~~ 54 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------D-------------------NPDLDEWVQALDQAIDAID 54 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------T-------------------S--HHHHHHHHHHCCHC-T
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------C-------------------CCCHHHHHHHHHHHHhhcC
Confidence 78999998875 44766554443432 67777666 1 2356777777777666654
Q ss_pred CceEEEEEeCcchHHHHHHh-hhhhhHHHhHHhhcccc
Q 011291 223 AEKAILVGHSAGALVAVNSY-FEAPERVAALILIAPAI 259 (489)
Q Consensus 223 ~~~v~liGhS~Gg~ial~~a-~~~p~~v~~lvl~~~~~ 259 (489)
+++++||||+|+..++.++ .....+|.+++|++|.-
T Consensus 55 -~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 55 -EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFD 91 (171)
T ss_dssp -TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--S
T ss_pred -CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCC
Confidence 5699999999999999999 66677899999999863
No 102
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.40 E-value=9.2e-12 Score=106.32 Aligned_cols=88 Identities=24% Similarity=0.291 Sum_probs=66.8
Q ss_pred EEEEccCCCCccchHH--hhHHhHhhCC--CeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 144 MVLFHGFGASVFSWNR--AMKPLAKTTS--SKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 144 VlllHG~~~~~~~~~~--~~~~L~~~~G--~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
||++||+.++...... +.+.+.+. + ..++++|++ .......+.+..+++
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~-~~~~~~~~p~l~--------------------------~~p~~a~~~l~~~i~ 54 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEH-GPDIQYPCPDLP--------------------------PFPEEAIAQLEQLIE 54 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHh-CCCceEECCCCC--------------------------cCHHHHHHHHHHHHH
Confidence 8999999998877543 34555553 3 456666654 345567778888999
Q ss_pred HhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccC
Q 011291 220 ILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILA 261 (489)
Q Consensus 220 ~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~ 261 (489)
....+.+.|||+||||+.|..+|.+++ +++ |+++|+..+
T Consensus 55 ~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 55 ELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred hCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 888778999999999999999998875 444 899988643
No 103
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.38 E-value=1.1e-11 Score=105.55 Aligned_cols=119 Identities=18% Similarity=0.245 Sum_probs=73.5
Q ss_pred cceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCC-CCCC
Q 011291 106 NGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAF-GLTS 184 (489)
Q Consensus 106 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~-G~S~ 184 (489)
+|..|+.+...|.++. ....++||+..|++.....|..++.+|+.. ||+|+.||...| |.|+
T Consensus 11 ~~~~I~vwet~P~~~~----------------~~~~~tiliA~Gf~rrmdh~agLA~YL~~N-GFhViRyDsl~HvGlSs 73 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNE----------------PKRNNTILIAPGFARRMDHFAGLAEYLSAN-GFHVIRYDSLNHVGLSS 73 (294)
T ss_dssp TTEEEEEEEE---TTS-------------------S-EEEEE-TT-GGGGGGHHHHHHHHTT-T--EEEE---B------
T ss_pred CCCEEEEeccCCCCCC----------------cccCCeEEEecchhHHHHHHHHHHHHHhhC-CeEEEeccccccccCCC
Confidence 6888999998886321 234589999999999999999999999997 999999998875 8887
Q ss_pred CCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh---cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccc
Q 011291 185 RVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL---AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 258 (489)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~ 258 (489)
+ ....+++....+++..+++++ +..++.|+.-|+.|-+|+..|.+- .+.-+|..-+.
T Consensus 74 G---------------~I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGV 133 (294)
T PF02273_consen 74 G---------------DINEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGV 133 (294)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--
T ss_pred C---------------ChhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeee
Confidence 5 346688988888888888776 678999999999999999998853 35555555443
No 104
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.35 E-value=1.3e-11 Score=107.88 Aligned_cols=114 Identities=16% Similarity=0.110 Sum_probs=76.2
Q ss_pred CCCcEEEEccCCCCccchHH--hhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNR--AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~--~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
+.|.||++||.+++...|.. -...|+++.||.|+.++......... + +.|.......+.-+...+...+..+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~---c---w~w~~~~~~~g~~d~~~i~~lv~~v 88 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQG---C---WNWFSDDQQRGGGDVAFIAALVDYV 88 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCC---c---ccccccccccCccchhhHHHHHHhH
Confidence 45889999999999887654 24678887799999999653222111 1 1111111111222333333334445
Q ss_pred HHHh--cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 218 IDIL--AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 218 l~~l--~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
+++. +.++|++.|+|.||+++..++..+|+.|.++..+++..
T Consensus 89 ~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 89 AARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred hhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 5554 45699999999999999999999999999988888764
No 105
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.34 E-value=5.4e-11 Score=107.46 Aligned_cols=100 Identities=24% Similarity=0.239 Sum_probs=82.4
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 221 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l 221 (489)
++|+|+|+.+++...|..+++.|..+ ++.|+.++.+|.+.... ...+++++++.....|...
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~-~~~v~~i~~~~~~~~~~-----------------~~~si~~la~~y~~~I~~~ 62 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDD-VIGVYGIEYPGRGDDEP-----------------PPDSIEELASRYAEAIRAR 62 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTT-EEEEEEECSTTSCTTSH-----------------EESSHHHHHHHHHHHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCC-eEEEEEEecCCCCCCCC-----------------CCCCHHHHHHHHHHHhhhh
Confidence 37999999999999999999999885 58999999999983332 4478999999988877776
Q ss_pred cCc-eEEEEEeCcchHHHHHHhhhhh---hHHHhHHhhcccc
Q 011291 222 AAE-KAILVGHSAGALVAVNSYFEAP---ERVAALILIAPAI 259 (489)
Q Consensus 222 ~~~-~v~liGhS~Gg~ial~~a~~~p---~~v~~lvl~~~~~ 259 (489)
..+ ++.|+|||+||.+|+.+|.+-- ..+..++++++..
T Consensus 63 ~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 63 QPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp TSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred CCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 655 9999999999999999997643 3477888888653
No 106
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.34 E-value=1.3e-12 Score=120.29 Aligned_cols=106 Identities=22% Similarity=0.181 Sum_probs=78.3
Q ss_pred CCCcEEEEccCCCCc-cchHH-hhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASV-FSWNR-AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 140 ~~p~VlllHG~~~~~-~~~~~-~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
++|++|+|||++++. ..|.. +...+....+|+|+++|+++++.+.. .....+.....+++..+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y---------------~~a~~~~~~v~~~la~~ 99 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNY---------------PQAVNNTRVVGAELAKF 99 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccCh---------------HHHHHhHHHHHHHHHHH
Confidence 468999999999887 56654 34445443379999999998843321 11223444555666666
Q ss_pred HHHh------cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 218 IDIL------AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 218 l~~l------~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
++.+ +.+++++|||||||.+|..++..+|++|.++++++|+..
T Consensus 100 l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 100 LDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 6554 457899999999999999999999999999999998753
No 107
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.33 E-value=1.4e-11 Score=110.85 Aligned_cols=103 Identities=18% Similarity=0.224 Sum_probs=64.3
Q ss_pred CCcEEEEccCCCCccc---hHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 141 GFPMVLFHGFGASVFS---WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~---~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
...||||.|.+..... ...+++.|... ||.|+-+-++- + ..-++..+++..++||.++
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~-~wsl~q~~LsS----S--------------y~G~G~~SL~~D~~eI~~~ 93 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEET-GWSLFQVQLSS----S--------------YSGWGTSSLDRDVEEIAQL 93 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-T-T-EEEEE--GG----G--------------BTTS-S--HHHHHHHHHHH
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccC-CeEEEEEEecC----c--------------cCCcCcchhhhHHHHHHHH
Confidence 4579999998865433 45567777664 89999998762 1 1123455788899999888
Q ss_pred HHHh--------cCceEEEEEeCcchHHHHHHhhhhh-----hHHHhHHhhcccccCc
Q 011291 218 IDIL--------AAEKAILVGHSAGALVAVNSYFEAP-----ERVAALILIAPAILAP 262 (489)
Q Consensus 218 l~~l--------~~~~v~liGhS~Gg~ial~~a~~~p-----~~v~~lvl~~~~~~~~ 262 (489)
++.+ +.++|+|+|||.|+.-+++|+.... ..|+++||-+|.....
T Consensus 94 v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 94 VEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp HHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TT
T ss_pred HHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChh
Confidence 8765 2468999999999999999987642 4699999999976543
No 108
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.31 E-value=2.8e-11 Score=111.93 Aligned_cols=107 Identities=13% Similarity=0.150 Sum_probs=80.4
Q ss_pred CCCcEEEEccCCCCccchH-----HhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWN-----RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLAT 214 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~-----~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 214 (489)
-++|+|++|-+-...+.|+ .++..|.++ |+.|+.+++++=..+.+ ...++.|-.+.+.+.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~-g~~vfvIsw~nPd~~~~-------------~~~~edYi~e~l~~ai 171 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQ-GLDVFVISWRNPDASLA-------------AKNLEDYILEGLSEAI 171 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHc-CCceEEEeccCchHhhh-------------hccHHHHHHHHHHHHH
Confidence 4678999999877666653 467788886 99999999987666552 1122334444444555
Q ss_pred HHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhH-HHhHHhhccccc
Q 011291 215 LYFIDILAAEKAILVGHSAGALVAVNSYFEAPER-VAALILIAPAIL 260 (489)
Q Consensus 215 ~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~-v~~lvl~~~~~~ 260 (489)
..+.+..+.++|.++|+|.||+++..+++.++.+ |+.++++.....
T Consensus 172 d~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 172 DTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred HHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 5666667889999999999999999998888877 999998877654
No 109
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.30 E-value=4.9e-11 Score=105.48 Aligned_cols=107 Identities=23% Similarity=0.160 Sum_probs=75.2
Q ss_pred cCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Q 011291 137 TKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY 216 (489)
Q Consensus 137 ~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ 216 (489)
..+..|.|||+||+......|..++++++.. ||-|+.+|+...+.... ..+.....+.++.+..
T Consensus 13 ~~g~yPVv~f~~G~~~~~s~Ys~ll~hvASh-GyIVV~~d~~~~~~~~~---------------~~~~~~~~~vi~Wl~~ 76 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLINSWYSQLLEHVASH-GYIVVAPDLYSIGGPDD---------------TDEVASAAEVIDWLAK 76 (259)
T ss_pred CCCCcCEEEEeCCcCCCHHHHHHHHHHHHhC-ceEEEEecccccCCCCc---------------chhHHHHHHHHHHHHh
Confidence 3577899999999998888899999999996 99999999765333210 0011122222222111
Q ss_pred HHH-Hh------cCceEEEEEeCcchHHHHHHhhhh-----hhHHHhHHhhcccc
Q 011291 217 FID-IL------AAEKAILVGHSAGALVAVNSYFEA-----PERVAALILIAPAI 259 (489)
Q Consensus 217 ~l~-~l------~~~~v~liGhS~Gg~ial~~a~~~-----p~~v~~lvl~~~~~ 259 (489)
=++ .+ +..++.|.|||-||-++..++..+ +.+++++|+++|.-
T Consensus 77 ~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 77 GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 111 11 346899999999999999988877 45899999999863
No 110
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=3.2e-11 Score=125.08 Aligned_cols=240 Identities=16% Similarity=0.140 Sum_probs=157.1
Q ss_pred CCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc---hH-HhhHHhHhhCCCeEE
Q 011291 98 PDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS---WN-RAMKPLAKTTSSKVL 173 (489)
Q Consensus 98 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~---~~-~~~~~L~~~~G~~Vi 173 (489)
.+...+..+|..+++....|++. ...++-|.||.+||++++... |. .+...+....|+.|+
T Consensus 498 ~~~~~i~~~~~~~~~~~~lP~~~---------------~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~ 562 (755)
T KOG2100|consen 498 VEFGKIEIDGITANAILILPPNF---------------DPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVL 562 (755)
T ss_pred ceeEEEEeccEEEEEEEecCCCC---------------CCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEE
Confidence 34444556999999999988732 223466888999999974322 11 122233343599999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh--cCceEEEEEeCcchHHHHHHhhhhhh-HHH
Q 011291 174 AFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL--AAEKAILVGHSAGALVAVNSYFEAPE-RVA 250 (489)
Q Consensus 174 ~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~liGhS~Gg~ial~~a~~~p~-~v~ 250 (489)
.+|.||.|........ .-....+.....|....+..+++.. +.+++.|.|+|+||++++.++...|+ .++
T Consensus 563 ~vd~RGs~~~G~~~~~-------~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fk 635 (755)
T KOG2100|consen 563 QVDGRGSGGYGWDFRS-------ALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFK 635 (755)
T ss_pred EEcCCCcCCcchhHHH-------HhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEE
Confidence 9999997765432110 1134566778888888888887764 55799999999999999999998874 455
Q ss_pred hHHhhcccccCccccccccccCCCCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 011291 251 ALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKV 330 (489)
Q Consensus 251 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (489)
+.+.++|+....-.
T Consensus 636 cgvavaPVtd~~~y------------------------------------------------------------------ 649 (755)
T KOG2100|consen 636 CGVAVAPVTDWLYY------------------------------------------------------------------ 649 (755)
T ss_pred EEEEecceeeeeee------------------------------------------------------------------
Confidence 55889887532100
Q ss_pred HhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhh-cCcccccchhhHHHHHHHHHhcCCcCCCCchhhhh
Q 011291 331 LSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGY-TKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKR 409 (489)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (489)
+. ...+.| ..+... ... +........
T Consensus 650 -------------------------------ds-----~~terymg~p~~~---~~~--------------y~e~~~~~~ 676 (755)
T KOG2100|consen 650 -------------------------------DS-----TYTERYMGLPSEN---DKG--------------YEESSVSSP 676 (755)
T ss_pred -------------------------------cc-----cccHhhcCCCccc---cch--------------hhhccccch
Confidence 00 000000 000000 000 001133445
Q ss_pred cccCCccE-EEEecCCCCCCCchhHHHHHhhCCC----CEEEEecCCCCCCcccc-HHHHHHHHHHHHHHhhCCC
Q 011291 410 LHEISCPV-LIVTGDTDRIVPSWNAERLSRAIPG----STFEVIKNCGHVPQEEK-VEEFVSIVARFLQRAFGYS 478 (489)
Q Consensus 410 l~~i~~Pv-Lii~G~~D~~vp~~~~~~l~~~~~~----~~~~~i~g~gH~~~~e~-p~~v~~~i~~fl~~~~~~~ 478 (489)
+..++.|. |++||+.|..|+.+++..+.+++.+ .++.++|+.+|.+..-. -..+...+..|+...+..+
T Consensus 677 ~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 677 ANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGSP 751 (755)
T ss_pred hhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCcc
Confidence 56666666 9999999999999988888877742 68999999999887644 3667889999999776654
No 111
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.29 E-value=7.9e-11 Score=122.58 Aligned_cols=83 Identities=12% Similarity=-0.050 Sum_probs=65.2
Q ss_pred hhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc-----------------
Q 011291 160 AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA----------------- 222 (489)
Q Consensus 160 ~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~----------------- 222 (489)
+.+.++.+ ||.|+.+|.||+|.|++.. ..+. .+..+|..++|+++.
T Consensus 271 ~~~~~~~r-GYaVV~~D~RGtg~SeG~~---------------~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq 333 (767)
T PRK05371 271 LNDYFLPR-GFAVVYVSGIGTRGSDGCP---------------TTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKA 333 (767)
T ss_pred HHHHHHhC-CeEEEEEcCCCCCCCCCcC---------------ccCC-HHHHHHHHHHHHHHhhCCcccccccccccccc
Confidence 45678886 9999999999999998631 1111 345667777777764
Q ss_pred ---CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 223 ---AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 223 ---~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
..+|.++|.|+||++++.+|...|..++++|..++..
T Consensus 334 ~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 334 DWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred CCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 3699999999999999999988888899999887653
No 112
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.28 E-value=2e-11 Score=124.51 Aligned_cols=132 Identities=17% Similarity=0.076 Sum_probs=89.1
Q ss_pred CceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCC
Q 011291 100 SCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPA 179 (489)
Q Consensus 100 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G 179 (489)
..+...++.++.|...+...+. + ..| ....|+||++||++++...|..+++.|.++ ||+|+++|+||
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~---~--~~p-------~~g~P~VVllHG~~g~~~~~~~lA~~La~~-Gy~VIaiDlpG 486 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLET---F--AAP-------TDGWPVVIYQHGITGAKENALAFAGTLAAA-GVATIAIDHPL 486 (792)
T ss_pred eEEEecCcchhhhhhccccccc---c--cCC-------CCCCcEEEEeCCCCCCHHHHHHHHHHHHhC-CcEEEEeCCCC
Confidence 3455566777777665433100 0 000 123478999999999999999999999986 99999999999
Q ss_pred CCCCCCCCCCCCCCCCcCCCC--------CCCCCChHHHHHHHHHHHHHhc----------------CceEEEEEeCcch
Q 011291 180 FGLTSRVFPFQQPTPDTENKK--------PLNPYSMAFSVLATLYFIDILA----------------AEKAILVGHSAGA 235 (489)
Q Consensus 180 ~G~S~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~dl~~~l~~l~----------------~~~v~liGhS~Gg 235 (489)
||.|........-........ ......+.+.+.|+..++..+. ..+++++||||||
T Consensus 487 HG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGg 566 (792)
T TIGR03502 487 HGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGG 566 (792)
T ss_pred CCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHH
Confidence 999954311000000000000 0012378999999999888876 3489999999999
Q ss_pred HHHHHHhhh
Q 011291 236 LVAVNSYFE 244 (489)
Q Consensus 236 ~ial~~a~~ 244 (489)
+++..++..
T Consensus 567 iig~~~~~~ 575 (792)
T TIGR03502 567 IVGTSFIAY 575 (792)
T ss_pred HHHHHHHHh
Confidence 999988864
No 113
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.27 E-value=3.4e-10 Score=111.55 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=85.6
Q ss_pred Cceeeec----ceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhh--------------
Q 011291 100 SCFCEFN----GVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAM-------------- 161 (489)
Q Consensus 100 ~~~~~~~----g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~-------------- 161 (489)
..+++++ +..++|+.+...+. ..+.|.||+++|++|.+..+..+.
T Consensus 49 sGy~~v~~~~~~~~lFyw~~~s~~~-----------------~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~ 111 (462)
T PTZ00472 49 SGYFDIPGNQTDKHYFYWAFGPRNG-----------------NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDI 111 (462)
T ss_pred eEEEEeCCCCCCceEEEEEEEcCCC-----------------CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCce
Confidence 4455553 46799998875421 235689999999999886542211
Q ss_pred ----HHhHhhCCCeEEEeCCC-CCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh-------cCceEEEE
Q 011291 162 ----KPLAKTTSSKVLAFDRP-AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL-------AAEKAILV 229 (489)
Q Consensus 162 ----~~L~~~~G~~Vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~v~li 229 (489)
..+.+. ..|+.+|+| |+|.|.... .....+.++.++|+..+++.+ +..+++|+
T Consensus 112 ~~n~~sW~~~--~~~l~iDqP~G~G~S~~~~-------------~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~ 176 (462)
T PTZ00472 112 YNNTYSWNNE--AYVIYVDQPAGVGFSYADK-------------ADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVV 176 (462)
T ss_pred eECCcccccc--cCeEEEeCCCCcCcccCCC-------------CCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEE
Confidence 113332 689999975 899886421 112345678888888888743 44789999
Q ss_pred EeCcchHHHHHHhhhhhh----------HHHhHHhhcccc
Q 011291 230 GHSAGALVAVNSYFEAPE----------RVAALILIAPAI 259 (489)
Q Consensus 230 GhS~Gg~ial~~a~~~p~----------~v~~lvl~~~~~ 259 (489)
|||+||.++..+|..--+ .++++++-++..
T Consensus 177 GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 177 GESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred eecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 999999999888765311 255666666554
No 114
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.26 E-value=1.1e-10 Score=108.02 Aligned_cols=119 Identities=18% Similarity=0.163 Sum_probs=83.5
Q ss_pred cceEEEEEeccC--ccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc-hHH--h-------hHHhHhhCCCeEE
Q 011291 106 NGVHLHYKVYDA--ESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS-WNR--A-------MKPLAKTTSSKVL 173 (489)
Q Consensus 106 ~g~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~-~~~--~-------~~~L~~~~G~~Vi 173 (489)
||++|+..++.| . ..++.|+||..|+++..... ... . ...++++ ||.|+
T Consensus 1 DGv~L~adv~~P~~~------------------~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~-GY~vV 61 (272)
T PF02129_consen 1 DGVRLAADVYRPGAD------------------GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAER-GYAVV 61 (272)
T ss_dssp TS-EEEEEEEEE--T------------------TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHT-T-EEE
T ss_pred CCCEEEEEEEecCCC------------------CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhC-CCEEE
Confidence 688999999988 3 14567889999999865311 111 1 1237886 99999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc-----CceEEEEEeCcchHHHHHHhhhhhhH
Q 011291 174 AFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA-----AEKAILVGHSAGALVAVNSYFEAPER 248 (489)
Q Consensus 174 ~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~-----~~~v~liGhS~Gg~ial~~a~~~p~~ 248 (489)
..|.||.|.|+.... .. .....+|..++|+.+. ..+|.++|.|++|+.++.+|...|..
T Consensus 62 ~~D~RG~g~S~G~~~---------------~~-~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~ 125 (272)
T PF02129_consen 62 VQDVRGTGGSEGEFD---------------PM-SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPH 125 (272)
T ss_dssp EEE-TTSTTS-S-B----------------TT-SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TT
T ss_pred EECCcccccCCCccc---------------cC-ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCC
Confidence 999999999986321 11 5566777777777763 24899999999999999999978888
Q ss_pred HHhHHhhcccc
Q 011291 249 VAALILIAPAI 259 (489)
Q Consensus 249 v~~lvl~~~~~ 259 (489)
+++++...+..
T Consensus 126 LkAi~p~~~~~ 136 (272)
T PF02129_consen 126 LKAIVPQSGWS 136 (272)
T ss_dssp EEEEEEESE-S
T ss_pred ceEEEecccCC
Confidence 99998887654
No 115
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.26 E-value=8.9e-11 Score=98.97 Aligned_cols=180 Identities=16% Similarity=0.153 Sum_probs=120.9
Q ss_pred CcEEEEccCCCCccc-hHHhhHHhHhhCCCeEEEeCCC-CCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 142 FPMVLFHGFGASVFS-WNRAMKPLAKTTSSKVLAFDRP-AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 142 p~VlllHG~~~~~~~-~~~~~~~L~~~~G~~Vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
..||++--..|.... -+..+..++.. ||.|+.||+- |--.|.. . ++.....-....+..-.-.++..+++
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~-Gy~v~vPD~~~Gdp~~~~---~----~~~~~~~w~~~~~~~~~~~~i~~v~k 111 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALN-GYTVLVPDFFRGDPWSPS---L----QKSERPEWMKGHSPPKIWKDITAVVK 111 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcC-CcEEEcchhhcCCCCCCC---C----ChhhhHHHHhcCCcccchhHHHHHHH
Confidence 467777776555443 66788888886 9999999974 3111110 0 00000111122333334445555555
Q ss_pred Hh---c-CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCccccccccccCCCCCcccccccccccccchhhhH
Q 011291 220 IL---A-AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFL 295 (489)
Q Consensus 220 ~l---~-~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (489)
.+ + .+++.++|++|||.++..+....| .+.++++.-|...
T Consensus 112 ~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~----------------------------------- 155 (242)
T KOG3043|consen 112 WLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV----------------------------------- 155 (242)
T ss_pred HHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC-----------------------------------
Confidence 54 3 578999999999999998888887 5777776655321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhccccchhhhhhHhhhhhHHHHHhhcCchhhHHHHHhhhc
Q 011291 296 KVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYT 375 (489)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (489)
T Consensus 156 -------------------------------------------------------------------------------- 155 (242)
T KOG3043|consen 156 -------------------------------------------------------------------------------- 155 (242)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccchhhHHHHHHHHHhcCCcCCCCchhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCC-----CEEEEecC
Q 011291 376 KPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG-----STFEVIKN 450 (489)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~-----~~~~~i~g 450 (489)
+ ......+++|||++.|+.|..+|++....+.+.+.+ ..+.+|+|
T Consensus 156 -----------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g 205 (242)
T KOG3043|consen 156 -----------------------------D-SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSG 205 (242)
T ss_pred -----------------------------C-hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCC
Confidence 1 233466789999999999999999988888887743 36899999
Q ss_pred CCCCCcc-----ccH------HHHHHHHHHHHHHhh
Q 011291 451 CGHVPQE-----EKV------EEFVSIVARFLQRAF 475 (489)
Q Consensus 451 ~gH~~~~-----e~p------~~v~~~i~~fl~~~~ 475 (489)
.+|.+.. ..| ++..+.+..||+..+
T Consensus 206 ~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 206 VGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred ccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 9996653 222 677788888888764
No 116
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=1.6e-10 Score=111.15 Aligned_cols=133 Identities=15% Similarity=0.083 Sum_probs=97.7
Q ss_pred eeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc---hHH----hhHHhHhhCCCeEEEe
Q 011291 103 CEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS---WNR----AMKPLAKTTSSKVLAF 175 (489)
Q Consensus 103 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~---~~~----~~~~L~~~~G~~Vi~~ 175 (489)
-.-.|..++..++.|.+ .+...+.|+|+++-|+++-... |.. -...|+.. ||.|+.+
T Consensus 619 qs~tg~~lYgmiyKPhn---------------~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Lasl-Gy~Vv~I 682 (867)
T KOG2281|consen 619 QSKTGLTLYGMIYKPHN---------------FQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASL-GYVVVFI 682 (867)
T ss_pred ecCCCcEEEEEEEcccc---------------CCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhc-ceEEEEE
Confidence 34457788889998863 2224567999999999874422 222 24677875 9999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh---cCceEEEEEeCcchHHHHHHhhhhhhHHHhH
Q 011291 176 DRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL---AAEKAILVGHSAGALVAVNSYFEAPERVAAL 252 (489)
Q Consensus 176 D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~liGhS~Gg~ial~~a~~~p~~v~~l 252 (489)
|-||.......... --....+...++|.++.+..+.++. +.++|.|-|||+||++++....++|+.++..
T Consensus 683 DnRGS~hRGlkFE~-------~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvA 755 (867)
T KOG2281|consen 683 DNRGSAHRGLKFES-------HIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVA 755 (867)
T ss_pred cCCCccccchhhHH-------HHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEE
Confidence 99996544321100 0134567788999999999999886 4689999999999999999999999988877
Q ss_pred Hhhccc
Q 011291 253 ILIAPA 258 (489)
Q Consensus 253 vl~~~~ 258 (489)
|.-+|.
T Consensus 756 IAGapV 761 (867)
T KOG2281|consen 756 IAGAPV 761 (867)
T ss_pred eccCcc
Confidence 766654
No 117
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.23 E-value=7.4e-11 Score=105.12 Aligned_cols=98 Identities=24% Similarity=0.264 Sum_probs=62.2
Q ss_pred EEEEccCCC---CccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH
Q 011291 144 MVLFHGFGA---SVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 220 (489)
Q Consensus 144 VlllHG~~~---~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~ 220 (489)
||++||++- +......+...++++.|+.|+.+|+|=..+.. ....++|..+.+..++++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~------------------~p~~~~D~~~a~~~l~~~ 62 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP------------------FPAALEDVKAAYRWLLKN 62 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS------------------TTHHHHHHHHHHHHHHHT
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc------------------ccccccccccceeeeccc
Confidence 799999874 33445566777776349999999998322111 112333333334444444
Q ss_pred -----hcCceEEEEEeCcchHHHHHHhhhhhh----HHHhHHhhcccc
Q 011291 221 -----LAAEKAILVGHSAGALVAVNSYFEAPE----RVAALILIAPAI 259 (489)
Q Consensus 221 -----l~~~~v~liGhS~Gg~ial~~a~~~p~----~v~~lvl~~~~~ 259 (489)
.+.++++|+|+|.||.+++.++....+ .++++++++|..
T Consensus 63 ~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 63 ADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp HHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred cccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 345799999999999999999876544 378888888854
No 118
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.10 E-value=2.9e-09 Score=90.07 Aligned_cols=62 Identities=29% Similarity=0.477 Sum_probs=51.7
Q ss_pred ccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHHHhh
Q 011291 411 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 475 (489)
Q Consensus 411 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~~ 475 (489)
..+++|.|.|.|+.|.++|...+..|++.+++..++.-+| ||++.... ...+.|.+||+...
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hpg-gH~VP~~~--~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHPG-GHIVPNKA--KYKEKIADFIQSFL 221 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecCC-CccCCCch--HHHHHHHHHHHHHH
Confidence 5679999999999999999999999999999997777675 99998665 45667777776654
No 119
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.08 E-value=2.4e-09 Score=88.78 Aligned_cols=53 Identities=13% Similarity=0.209 Sum_probs=45.1
Q ss_pred hhcccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccH
Q 011291 408 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKV 460 (489)
Q Consensus 408 ~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p 460 (489)
..+..++.|+|++.+++|.---.++.+.++..+..+++..|+|.+|+-..++.
T Consensus 201 ~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 201 WEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEET 253 (270)
T ss_pred HHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHHh
Confidence 34577899999999999976667889999999999999999999998766543
No 120
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.07 E-value=1.8e-09 Score=122.50 Aligned_cols=101 Identities=18% Similarity=0.076 Sum_probs=85.5
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
+++++++++||++++...|..+...|.. ++.|+++|.+|+|.+.. ..++++++++++.+.+
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~--~~~v~~~~~~g~~~~~~-----------------~~~~l~~la~~~~~~i 1126 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDP--QWSIYGIQSPRPDGPMQ-----------------TATSLDEVCEAHLATL 1126 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCC--CCcEEEEECCCCCCCCC-----------------CCCCHHHHHHHHHHHH
Confidence 3468899999999999999999999976 49999999999986531 3579999999999999
Q ss_pred HHhcC-ceEEEEEeCcchHHHHHHhhhh---hhHHHhHHhhccc
Q 011291 219 DILAA-EKAILVGHSAGALVAVNSYFEA---PERVAALILIAPA 258 (489)
Q Consensus 219 ~~l~~-~~v~liGhS~Gg~ial~~a~~~---p~~v~~lvl~~~~ 258 (489)
+.+.. .+++++||||||.++..+|.+. ++++..++++++.
T Consensus 1127 ~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1127 LEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred HhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 88754 4899999999999999999864 5678888888763
No 121
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.07 E-value=3.8e-09 Score=86.06 Aligned_cols=90 Identities=16% Similarity=0.220 Sum_probs=65.3
Q ss_pred CcEEEEccCCCCccc-hHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH
Q 011291 142 FPMVLFHGFGASVFS-WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 220 (489)
Q Consensus 142 p~VlllHG~~~~~~~-~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~ 220 (489)
+.+|+|||+.++... |.. .+..+. -.+-.+++ ..+..-..+++++.+...+..
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~---~we~~l-~~a~rveq----------------------~~w~~P~~~dWi~~l~~~v~a 56 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQS---RWESAL-PNARRVEQ----------------------DDWEAPVLDDWIARLEKEVNA 56 (181)
T ss_pred ceEEEecCCCCCChhHHHH---HHHhhC-ccchhccc----------------------CCCCCCCHHHHHHHHHHHHhc
Confidence 569999999887743 433 332221 11222222 134566788999988888887
Q ss_pred hcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccc
Q 011291 221 LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 258 (489)
Q Consensus 221 l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~ 258 (489)
. .++++||+||+|+.+++.++.+....|+++++++|+
T Consensus 57 ~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVApp 93 (181)
T COG3545 57 A-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPP 93 (181)
T ss_pred c-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCC
Confidence 7 466999999999999999998776689999999986
No 122
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.06 E-value=7.4e-10 Score=92.48 Aligned_cols=97 Identities=24% Similarity=0.249 Sum_probs=72.4
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH-
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI- 220 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~- 220 (489)
..+||+-|=++....=..+.+.|+++ |+.|+.+|-+-|=.+. .+.++.+.|+..++++
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~-G~~VvGvdsl~Yfw~~--------------------rtP~~~a~Dl~~~i~~y 61 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQ-GVPVVGVDSLRYFWSE--------------------RTPEQTAADLARIIRHY 61 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHC-CCeEEEechHHHHhhh--------------------CCHHHHHHHHHHHHHHH
Confidence 35788888877765445678899996 9999999976544443 3566777777777755
Q ss_pred ---hcCceEEEEEeCcchHHHHHHhhhhhh----HHHhHHhhcccc
Q 011291 221 ---LAAEKAILVGHSAGALVAVNSYFEAPE----RVAALILIAPAI 259 (489)
Q Consensus 221 ---l~~~~v~liGhS~Gg~ial~~a~~~p~----~v~~lvl~~~~~ 259 (489)
.+.++++|+|+|+|+-+......+.|. +|..++|+++..
T Consensus 62 ~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 62 RARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 477899999999999887766655553 677788887753
No 123
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.06 E-value=2.2e-09 Score=92.78 Aligned_cols=107 Identities=19% Similarity=0.072 Sum_probs=74.6
Q ss_pred cCCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Q 011291 137 TKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY 216 (489)
Q Consensus 137 ~~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ 216 (489)
..|..|.|+|+||+......|..++.+++.+ ||-|+++++-.. .. +.. ..+..+....++.+..
T Consensus 42 ~~G~yPVilF~HG~~l~ns~Ys~lL~HIASH-GfIVVAPQl~~~--~~-p~~------------~~Ei~~aa~V~~WL~~ 105 (307)
T PF07224_consen 42 EAGTYPVILFLHGFNLYNSFYSQLLAHIASH-GFIVVAPQLYTL--FP-PDG------------QDEIKSAASVINWLPE 105 (307)
T ss_pred cCCCccEEEEeechhhhhHHHHHHHHHHhhc-CeEEEechhhcc--cC-CCc------------hHHHHHHHHHHHHHHh
Confidence 3577899999999999999999999999997 999999998642 11 100 0011122222222222
Q ss_pred HHHHh-------cCceEEEEEeCcchHHHHHHhhhhh--hHHHhHHhhcccc
Q 011291 217 FIDIL-------AAEKAILVGHSAGALVAVNSYFEAP--ERVAALILIAPAI 259 (489)
Q Consensus 217 ~l~~l-------~~~~v~liGhS~Gg~ial~~a~~~p--~~v~~lvl~~~~~ 259 (489)
-++++ +..++.++|||.||-.|..+|..+. -.+.+||.++|..
T Consensus 106 gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 106 GLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred hhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 22222 3469999999999999999998763 2488888888864
No 124
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.05 E-value=1.8e-10 Score=101.98 Aligned_cols=48 Identities=29% Similarity=0.401 Sum_probs=34.1
Q ss_pred ccCCccEEEEecCCCCCCCchhHHHHHhhCCC-CEEEEecCCCCCCcccc
Q 011291 411 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPG-STFEVIKNCGHVPQEEK 459 (489)
Q Consensus 411 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~-~~~~~i~g~gH~~~~e~ 459 (489)
.+|++|+|.|+|++|.+++++.++.+.+.+.+ .+++..++ ||.+....
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~g-GH~vP~~~ 206 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDG-GHHVPRKK 206 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESS-SSS----H
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECC-CCcCcCCh
Confidence 56789999999999999999999999999877 78888875 99887653
No 125
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.04 E-value=7.8e-09 Score=97.91 Aligned_cols=104 Identities=20% Similarity=0.213 Sum_probs=70.6
Q ss_pred CCCCcEEEEccCC---CCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHH
Q 011291 139 KIGFPMVLFHGFG---ASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL 215 (489)
Q Consensus 139 ~~~p~VlllHG~~---~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~ 215 (489)
+..|+||++||++ ++.......+..++...|+.|+.+|+|-.-+-. ....++|..+.+.
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~------------------~p~~~~d~~~a~~ 138 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP------------------FPAALEDAYAAYR 138 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC------------------CCchHHHHHHHHH
Confidence 3578999999987 344445456666666569999999998433322 2234445444444
Q ss_pred HHHHHh-----cCceEEEEEeCcchHHHHHHhhhhhh----HHHhHHhhccccc
Q 011291 216 YFIDIL-----AAEKAILVGHSAGALVAVNSYFEAPE----RVAALILIAPAIL 260 (489)
Q Consensus 216 ~~l~~l-----~~~~v~liGhS~Gg~ial~~a~~~p~----~v~~lvl~~~~~~ 260 (489)
.+.++. +.+++.++|+|.||.+++.++..-.+ ...+.+++.|...
T Consensus 139 ~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 139 WLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred HHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 444442 35789999999999999988876544 3566777776643
No 126
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.04 E-value=1.6e-09 Score=94.95 Aligned_cols=122 Identities=18% Similarity=0.146 Sum_probs=74.5
Q ss_pred cceEEEEEeccCccccccccccccCCCCCCCcCCCC-CcEEEEccCCCCccchHH-hhH-------HhHhhCCCeEEEeC
Q 011291 106 NGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIG-FPMVLFHGFGASVFSWNR-AMK-------PLAKTTSSKVLAFD 176 (489)
Q Consensus 106 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~VlllHG~~~~~~~~~~-~~~-------~L~~~~G~~Vi~~D 176 (489)
-|..|-|+.|-|.+ .+.+.+. |.|||+||.+.....-.. +.. ..-+. ++-|+++.
T Consensus 170 tgneLkYrly~Pkd---------------y~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~ped-qcfVlAPQ 233 (387)
T COG4099 170 TGNELKYRLYTPKD---------------YAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPED-QCFVLAPQ 233 (387)
T ss_pred cCceeeEEEecccc---------------cCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccC-ceEEEccc
Confidence 46789999998862 2234455 899999999876654322 111 11121 34455554
Q ss_pred CCC-CCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH-HHHh--cCceEEEEEeCcchHHHHHHhhhhhhHHHhH
Q 011291 177 RPA-FGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF-IDIL--AAEKAILVGHSAGALVAVNSYFEAPERVAAL 252 (489)
Q Consensus 177 ~~G-~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~-l~~l--~~~~v~liGhS~Gg~ial~~a~~~p~~v~~l 252 (489)
+-- +-.++ .....-....++.+.+. .++. +..+++++|.|+||+.++.++.++|+.+.+.
T Consensus 234 y~~if~d~e----------------~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa 297 (387)
T COG4099 234 YNPIFADSE----------------EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAA 297 (387)
T ss_pred ccccccccc----------------cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhhee
Confidence 210 11111 01112223333334323 3443 4468999999999999999999999999999
Q ss_pred Hhhcccc
Q 011291 253 ILIAPAI 259 (489)
Q Consensus 253 vl~~~~~ 259 (489)
+++++..
T Consensus 298 ~~iaG~~ 304 (387)
T COG4099 298 VPIAGGG 304 (387)
T ss_pred eeecCCC
Confidence 9999854
No 127
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.03 E-value=6.3e-09 Score=89.04 Aligned_cols=114 Identities=18% Similarity=0.148 Sum_probs=83.0
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCC--CeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTS--SKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G--~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
+.+.++++.|.+|....|..+...|....+ +.++.+-..||-.-...... .......+.+++++.++.-.++
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~------~~s~~~~eifsL~~QV~HKlaF 101 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLRE------DHSHTNEEIFSLQDQVDHKLAF 101 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccc------ccccccccccchhhHHHHHHHH
Confidence 567899999999999999999888876543 56999988888765411110 0012234678999999988888
Q ss_pred HHHh--cCceEEEEEeCcchHHHHHHhhhhh--hHHHhHHhhcccc
Q 011291 218 IDIL--AAEKAILVGHSAGALVAVNSYFEAP--ERVAALILIAPAI 259 (489)
Q Consensus 218 l~~l--~~~~v~liGhS~Gg~ial~~a~~~p--~~v~~lvl~~~~~ 259 (489)
++.. ...+++++|||.|+++.+.+..... -.|.+++++-|..
T Consensus 102 ik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 102 IKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred HHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 8775 3468999999999999998876322 2466667666543
No 128
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.03 E-value=1.1e-08 Score=93.89 Aligned_cols=107 Identities=18% Similarity=0.121 Sum_probs=72.1
Q ss_pred CCCcEEEEccCCCCccchHH--hhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHH------
Q 011291 140 IGFPMVLFHGFGASVFSWNR--AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSV------ 211 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~--~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 211 (489)
.+|.+|.++|.|.+....+. ++..|.++ |+..+.+..|-||.-.+.... .....+..|+.
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~-----------~s~l~~VsDl~~~g~~~ 158 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQR-----------RSSLRNVSDLFVMGRAT 158 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHc-CcceEEEecccccccChhHhh-----------cccccchhHHHHHHhHH
Confidence 46788899998886655433 36788887 999999999999976543211 11112222222
Q ss_pred -HHHHHHH---HHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccc
Q 011291 212 -LATLYFI---DILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 258 (489)
Q Consensus 212 -~dl~~~l---~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~ 258 (489)
.+...++ +.-|..++.+.|.||||.+|...|..+|..+..+-++++.
T Consensus 159 i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 159 ILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 2222333 3337789999999999999999999999876655555543
No 129
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.03 E-value=1.1e-08 Score=95.29 Aligned_cols=124 Identities=21% Similarity=0.179 Sum_probs=89.2
Q ss_pred cceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCC-----ccchHHhhHHhHhhCCCeEEEeCCCCC
Q 011291 106 NGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGAS-----VFSWNRAMKPLAKTTSSKVLAFDRPAF 180 (489)
Q Consensus 106 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~-----~~~~~~~~~~L~~~~G~~Vi~~D~~G~ 180 (489)
....+..++|.|..... ....|.||++||+|.. ...|..+...++.+.+..|+.+|+|=-
T Consensus 70 ~~~~l~vRly~P~~~~~---------------~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA 134 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSS---------------ETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA 134 (336)
T ss_pred CCCCeEEEEEcCCCCCc---------------ccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC
Confidence 45567888888762110 1457899999998732 455788889998878999999999832
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH------hcCceEEEEEeCcchHHHHHHhhhh------hhH
Q 011291 181 GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI------LAAEKAILVGHSAGALVAVNSYFEA------PER 248 (489)
Q Consensus 181 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~------l~~~~v~liGhS~Gg~ial~~a~~~------p~~ 248 (489)
-+. .-...++|..+.+..+.++ .+.++++|.|-|.||.+|..+|.+. +-+
T Consensus 135 PEh------------------~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~k 196 (336)
T KOG1515|consen 135 PEH------------------PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPK 196 (336)
T ss_pred CCC------------------CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcc
Confidence 222 2344566777777766664 2567999999999999999888753 246
Q ss_pred HHhHHhhcccccCc
Q 011291 249 VAALILIAPAILAP 262 (489)
Q Consensus 249 v~~lvl~~~~~~~~ 262 (489)
+++.|++-|.....
T Consensus 197 i~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 197 IKGQILIYPFFQGT 210 (336)
T ss_pred eEEEEEEecccCCC
Confidence 88999998876543
No 130
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.02 E-value=1.5e-09 Score=99.65 Aligned_cols=98 Identities=22% Similarity=0.190 Sum_probs=69.4
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCC--CCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPA--FGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G--~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
..|.||+-||.+.....|..+.+.|++. ||.|.++|++| .|......... ......-+.+...|+..+
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~-Gf~Va~~~hpgs~~~~~~~~~~~~---------~~~~p~~~~erp~dis~l 139 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASY-GFVVAAPDHPGSNAGGAPAAYAGP---------GSYAPAEWWERPLDISAL 139 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhC-ceEEEeccCCCcccccCChhhcCC---------cccchhhhhcccccHHHH
Confidence 5688999999999999999999999996 99999999999 45544322110 001111223344444444
Q ss_pred HHH-------------hcCceEEEEEeCcchHHHHHHhhhhhh
Q 011291 218 IDI-------------LAAEKAILVGHSAGALVAVNSYFEAPE 247 (489)
Q Consensus 218 l~~-------------l~~~~v~liGhS~Gg~ial~~a~~~p~ 247 (489)
++. ++..+|.++|||+||+.++.++..+.+
T Consensus 140 Ld~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 140 LDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred HHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 433 234689999999999999999876654
No 131
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.98 E-value=2.1e-09 Score=96.42 Aligned_cols=117 Identities=23% Similarity=0.224 Sum_probs=69.7
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhH-hhCCC--eEE--EeCCCCC----CCCCCCCCCCCCCCCcCCCCCCCC-CChHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLA-KTTSS--KVL--AFDRPAF----GLTSRVFPFQQPTPDTENKKPLNP-YSMAF 209 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~-~~~G~--~Vi--~~D~~G~----G~S~~~~~~~~~~~~~~~~~~~~~-~~~~~ 209 (489)
...|.|||||++++...+..++..+. +. |. .++ .++--|+ |.=...... +.-+-...... .+...
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~-~~~~~~l~v~V~~~G~v~~~G~~~~~~~n----PiIqV~F~~n~~~~~~~ 84 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQ-GVAQKVLTVTVSKNGKVKVSGKLSKNAKN----PIIQVNFEDNRNANYKK 84 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCS-TS-S-EEEEEEETTSEEEEES---TT-SS-----EEEEEESSTT-CHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhc-CCCceEEEEEECCCCeEEEeeecCCCCCC----CEEEEEecCCCcCCHHH
Confidence 45689999999999999999999997 53 42 343 3444442 221110000 00000001122 45667
Q ss_pred HHHHHHHHHHHh----cCceEEEEEeCcchHHHHHHhhhhhh-----HHHhHHhhcccccC
Q 011291 210 SVLATLYFIDIL----AAEKAILVGHSAGALVAVNSYFEAPE-----RVAALILIAPAILA 261 (489)
Q Consensus 210 ~~~dl~~~l~~l----~~~~v~liGhS~Gg~ial~~a~~~p~-----~v~~lvl~~~~~~~ 261 (489)
.+..+..++..| +++++.+|||||||..++.|+..+.. .+.++|.++++...
T Consensus 85 qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 85 QAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 777777777665 67899999999999999998876422 58999999987643
No 132
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.96 E-value=4.5e-10 Score=103.83 Aligned_cols=106 Identities=20% Similarity=0.122 Sum_probs=60.4
Q ss_pred CCCCcEEEEccCCCCccc--------------h----HHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCC
Q 011291 139 KIGFPMVLFHGFGASVFS--------------W----NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKK 200 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~--------------~----~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 200 (489)
++.|.||++||-+++.+. + ..+...|+++ ||-|+++|.+|+|+........
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~-GYVvla~D~~g~GER~~~e~~~---------- 181 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR-GYVVLAPDALGFGERGDMEGAA---------- 181 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT-TSEEEEE--TTSGGG-SSCCCT----------
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC-CCEEEEEccccccccccccccc----------
Confidence 456889999998765422 1 1246788887 9999999999999976543211
Q ss_pred CCCCCChHHHHH---------------HHHHHHHHh------cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhc
Q 011291 201 PLNPYSMAFSVL---------------ATLYFIDIL------AAEKAILVGHSAGALVAVNSYFEAPERVAALILIA 256 (489)
Q Consensus 201 ~~~~~~~~~~~~---------------dl~~~l~~l------~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~ 256 (489)
....++...++. |....++.+ +.++|.++|+||||+.++.+++..+ +|++.|..+
T Consensus 182 ~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~ 257 (390)
T PF12715_consen 182 QGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANG 257 (390)
T ss_dssp TTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES
T ss_pred cccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhh
Confidence 111122222221 222233433 3479999999999999999888764 787776554
No 133
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.96 E-value=2.2e-09 Score=102.86 Aligned_cols=118 Identities=19% Similarity=0.128 Sum_probs=60.6
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCC-CCCCCC-CCCC--CCC---------CCcCCCCCCCCC
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAF-GLTSRV-FPFQ--QPT---------PDTENKKPLNPY 205 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~-G~S~~~-~~~~--~~~---------~~~~~~~~~~~~ 205 (489)
++-|.|||-||++++...|..++..|+.+ ||-|+++|+|.. +-..-. .... ... .+..........
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 45789999999999999999999999997 999999999943 111000 0000 000 000000000000
Q ss_pred -------ChHHHHHHHHHHHHHh--------------------------cCceEEEEEeCcchHHHHHHhhhhhhHHHhH
Q 011291 206 -------SMAFSVLATLYFIDIL--------------------------AAEKAILVGHSAGALVAVNSYFEAPERVAAL 252 (489)
Q Consensus 206 -------~~~~~~~dl~~~l~~l--------------------------~~~~v~liGhS~Gg~ial~~a~~~p~~v~~l 252 (489)
.++.-+.++..+++.+ +.+++.++|||+||..++..+... .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 0112223333333222 235799999999999999777665 579999
Q ss_pred Hhhccc
Q 011291 253 ILIAPA 258 (489)
Q Consensus 253 vl~~~~ 258 (489)
|++++.
T Consensus 256 I~LD~W 261 (379)
T PF03403_consen 256 ILLDPW 261 (379)
T ss_dssp EEES--
T ss_pred EEeCCc
Confidence 988874
No 134
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.93 E-value=5.1e-10 Score=98.90 Aligned_cols=68 Identities=25% Similarity=0.488 Sum_probs=41.7
Q ss_pred hcccCCccEEEEecCCCCCCCch-hHHHHHhhC-----C-CCEEEEecCCCCCCcc------c-----------------
Q 011291 409 RLHEISCPVLIVTGDTDRIVPSW-NAERLSRAI-----P-GSTFEVIKNCGHVPQE------E----------------- 458 (489)
Q Consensus 409 ~l~~i~~PvLii~G~~D~~vp~~-~~~~l~~~~-----~-~~~~~~i~g~gH~~~~------e----------------- 458 (489)
.+.++++|+|+|.|++|.+.|.. .++.+.+++ + +.+++.|+++||++.. .
T Consensus 110 pvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~ 189 (213)
T PF08840_consen 110 PVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEP 189 (213)
T ss_dssp -GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-H
T ss_pred cHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCCh
Confidence 36788999999999999999865 455555544 2 3688899999997522 1
Q ss_pred -----cHHHHHHHHHHHHHHhhC
Q 011291 459 -----KVEEFVSIVARFLQRAFG 476 (489)
Q Consensus 459 -----~p~~v~~~i~~fl~~~~~ 476 (489)
..++.++.+.+||+++++
T Consensus 190 ~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 190 EAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 125678899999998875
No 135
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.86 E-value=5.6e-08 Score=86.94 Aligned_cols=100 Identities=24% Similarity=0.253 Sum_probs=83.6
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 221 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l 221 (489)
|+|+++|+.+|....|..+...|... ..|+.++.||++.-.. ...+++++++...+.|..+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~--~~v~~l~a~g~~~~~~-----------------~~~~l~~~a~~yv~~Ir~~ 61 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL--LPVYGLQAPGYGAGEQ-----------------PFASLDDMAAAYVAAIRRV 61 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC--ceeeccccCccccccc-----------------ccCCHHHHHHHHHHHHHHh
Confidence 57999999999999999999999886 8999999999986432 4468889998877777776
Q ss_pred cC-ceEEEEEeCcchHHHHHHhhhh---hhHHHhHHhhccccc
Q 011291 222 AA-EKAILVGHSAGALVAVNSYFEA---PERVAALILIAPAIL 260 (489)
Q Consensus 222 ~~-~~v~liGhS~Gg~ial~~a~~~---p~~v~~lvl~~~~~~ 260 (489)
.. .+++|+|||+||.+|..+|.+- .+.|..++++++...
T Consensus 62 QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 62 QPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 54 5899999999999999999763 346888999988654
No 136
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.83 E-value=3.1e-07 Score=90.95 Aligned_cols=122 Identities=13% Similarity=0.110 Sum_probs=77.9
Q ss_pred ceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhh-------------------HHhHhh
Q 011291 107 GVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAM-------------------KPLAKT 167 (489)
Q Consensus 107 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~-------------------~~L~~~ 167 (489)
+..++|+.+...+ ...+.|.||.+.|+||++..+..+. ..+.+.
T Consensus 23 ~~~lfyw~~~s~~-----------------~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~ 85 (415)
T PF00450_consen 23 NAHLFYWFFESRN-----------------DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF 85 (415)
T ss_dssp TEEEEEEEEE-SS-----------------GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT
T ss_pred CcEEEEEEEEeCC-----------------CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc
Confidence 6789999987652 1246789999999999887764321 122332
Q ss_pred CCCeEEEeCCC-CCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh-------cCceEEEEEeCcchHHHH
Q 011291 168 TSSKVLAFDRP-AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL-------AAEKAILVGHSAGALVAV 239 (489)
Q Consensus 168 ~G~~Vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~v~liGhS~Gg~ial 239 (489)
..|+.+|+| |.|.|...... ....+.++.++++..+|+.+ ...+++|.|-|+||..+.
T Consensus 86 --an~l~iD~PvGtGfS~~~~~~------------~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP 151 (415)
T PF00450_consen 86 --ANLLFIDQPVGTGFSYGNDPS------------DYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVP 151 (415)
T ss_dssp --SEEEEE--STTSTT-EESSGG------------GGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHH
T ss_pred --cceEEEeecCceEEeeccccc------------cccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccch
Confidence 789999966 99999753221 13457788888888888664 335899999999999887
Q ss_pred HHhhhhh----------hHHHhHHhhcccc
Q 011291 240 NSYFEAP----------ERVAALILIAPAI 259 (489)
Q Consensus 240 ~~a~~~p----------~~v~~lvl~~~~~ 259 (489)
.+|..-- -.++++++.++..
T Consensus 152 ~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 152 ALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred hhHHhhhhccccccccccccccceecCccc
Confidence 7775421 1256777766654
No 137
>PRK04940 hypothetical protein; Provisional
Probab=98.82 E-value=1.6e-07 Score=78.59 Aligned_cols=52 Identities=10% Similarity=0.130 Sum_probs=39.2
Q ss_pred cEEEEecCCCCCCCchhHHHHHhhCCCC-EEEEecCCCCCCccccHHHHHHHHHHHHH
Q 011291 416 PVLIVTGDTDRIVPSWNAERLSRAIPGS-TFEVIKNCGHVPQEEKVEEFVSIVARFLQ 472 (489)
Q Consensus 416 PvLii~G~~D~~vp~~~~~~l~~~~~~~-~~~~i~g~gH~~~~e~p~~v~~~i~~fl~ 472 (489)
..+++..+.|.+.+...+. +.+.++ ++.+.+|+.|-+ ++-++....|.+|++
T Consensus 126 r~~vllq~gDEvLDyr~a~---~~y~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTA---EELHPYYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred cEEEEEeCCCcccCHHHHH---HHhccCceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 3589999999999865444 444555 788999988866 455667888999984
No 138
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.82 E-value=2.5e-08 Score=88.35 Aligned_cols=136 Identities=17% Similarity=0.120 Sum_probs=92.6
Q ss_pred eeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhh--HHhHhhCCCeEEEeCCCCC
Q 011291 103 CEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAM--KPLAKTTSSKVLAFDRPAF 180 (489)
Q Consensus 103 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~--~~L~~~~G~~Vi~~D~~G~ 180 (489)
+..+|....|+++.|+. .....|.||++||..++...+.... +.|+++.||-|+.+|.-
T Consensus 40 ~~~~g~~r~y~l~vP~g-----------------~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~-- 100 (312)
T COG3509 40 FDVNGLKRSYRLYVPPG-----------------LPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGY-- 100 (312)
T ss_pred cccCCCccceEEEcCCC-----------------CCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCcc--
Confidence 45688889999998862 0123478999999999988777664 78888779999999632
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCc--eEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccc
Q 011291 181 GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAE--KAILVGHSAGALVAVNSYFEAPERVAALILIAPA 258 (489)
Q Consensus 181 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~--~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~ 258 (489)
..+-........ ........+.-+...+.+.+..++...+++ +|++.|.|-||.++..++..+|+.+.++..+++.
T Consensus 101 ~~~wn~~~~~~~--~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~ 178 (312)
T COG3509 101 DRAWNANGCGNW--FGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGL 178 (312)
T ss_pred ccccCCCccccc--CCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecc
Confidence 222111111000 000011223344555555555666666665 8999999999999999999999999999988876
Q ss_pred c
Q 011291 259 I 259 (489)
Q Consensus 259 ~ 259 (489)
.
T Consensus 179 ~ 179 (312)
T COG3509 179 L 179 (312)
T ss_pred c
Confidence 4
No 139
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.81 E-value=1.1e-08 Score=90.83 Aligned_cols=105 Identities=20% Similarity=0.255 Sum_probs=70.7
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhh-------CCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHH---
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKT-------TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAF--- 209 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~-------~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~--- 209 (489)
++.|||||||..++...++.+...+.++ ..++++++|+......- ....+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~------------------~g~~l~~q~~ 64 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF------------------HGRTLQRQAE 64 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc------------------ccccHHHHHH
Confidence 4689999999999988887776555211 14789999987643221 1122222
Q ss_pred -HHHHHHHHHHHh-----cCceEEEEEeCcchHHHHHHhhhhh---hHHHhHHhhcccccCc
Q 011291 210 -SVLATLYFIDIL-----AAEKAILVGHSAGALVAVNSYFEAP---ERVAALILIAPAILAP 262 (489)
Q Consensus 210 -~~~dl~~~l~~l-----~~~~v~liGhS~Gg~ial~~a~~~p---~~v~~lvl~~~~~~~~ 262 (489)
..+.+..+++.+ +.++++||||||||.++..++...+ +.|+.+|.++++...+
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 223344444444 5679999999999999987765433 4699999998775443
No 140
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.74 E-value=1.6e-07 Score=87.12 Aligned_cols=64 Identities=20% Similarity=0.282 Sum_probs=47.2
Q ss_pred CCccEEEEecCCCCCCCchhHHHHHhhC-----CCCEEEEecCCCCCCccccHHHHHHHHHHHHHHhhCCCc
Q 011291 413 ISCPVLIVTGDTDRIVPSWNAERLSRAI-----PGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFGYSE 479 (489)
Q Consensus 413 i~~PvLii~G~~D~~vp~~~~~~l~~~~-----~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~~~~~~ 479 (489)
.+.|+++.+|..|.++|+...+.+.+.+ .+++++.+++.+|....-. -......||.+.+.+..
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~---~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA---SAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc---CcHHHHHHHHHHHCCCC
Confidence 3799999999999999988777766554 2567888899999764311 12356688988886543
No 141
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.68 E-value=1.8e-06 Score=82.57 Aligned_cols=99 Identities=20% Similarity=0.203 Sum_probs=69.1
Q ss_pred CCCcEEEE-----ccC--CCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHH
Q 011291 140 IGFPMVLF-----HGF--GASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVL 212 (489)
Q Consensus 140 ~~p~Vlll-----HG~--~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (489)
.++|+|++ ||- |+...+ ..+-..|.. |+.||.+.+. +.+....+++|...
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~d-SevG~AL~~--GHPvYFV~F~--------------------p~P~pgQTl~DV~~ 123 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKPD-SEVGVALRA--GHPVYFVGFF--------------------PEPEPGQTLEDVMR 123 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCcc-cHHHHHHHc--CCCeEEEEec--------------------CCCCCCCcHHHHHH
Confidence 45667776 332 332222 233444443 8999988764 22345568888888
Q ss_pred HHHHHHHHh-----cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccC
Q 011291 213 ATLYFIDIL-----AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILA 261 (489)
Q Consensus 213 dl~~~l~~l-----~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~ 261 (489)
....+++.+ +..|.+|+|.|.||..++.+|+.+|+.+.-+|+-+++...
T Consensus 124 ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 124 AEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred HHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 888888765 2348999999999999999999999988888877766543
No 142
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.65 E-value=3.8e-08 Score=86.08 Aligned_cols=89 Identities=22% Similarity=0.158 Sum_probs=50.9
Q ss_pred CcEEEEccCCC-CccchHHhhHHhHhhCCCe---EEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 142 FPMVLFHGFGA-SVFSWNRAMKPLAKTTSSK---VLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 142 p~VlllHG~~~-~~~~~~~~~~~L~~~~G~~---Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
.||||+||.++ ....|..+.+.|.++ ||. |+++++-.......... ......+..++.+-|..+
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~-----------~~~~~~~~~~l~~fI~~V 69 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQN-----------AHMSCESAKQLRAFIDAV 69 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHT-T--CCCEEEE--S-CCHHTHHHH-----------HHB-HHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHc-CCCcceeEeccCCCCCCCCcccc-----------cccchhhHHHHHHHHHHH
Confidence 47999999998 667899999999997 999 89999844333221000 000011123344444455
Q ss_pred HHHhcCceEEEEEeCcchHHHHHHhh
Q 011291 218 IDILAAEKAILVGHSAGALVAVNSYF 243 (489)
Q Consensus 218 l~~l~~~~v~liGhS~Gg~ial~~a~ 243 (489)
++.-+. +|.||||||||.++-.+..
T Consensus 70 l~~TGa-kVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 70 LAYTGA-KVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp HHHHT---EEEEEETCHHHHHHHHHH
T ss_pred HHhhCC-EEEEEEcCCcCHHHHHHHH
Confidence 555688 9999999999998886654
No 143
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.64 E-value=3.2e-06 Score=76.90 Aligned_cols=108 Identities=22% Similarity=0.253 Sum_probs=77.2
Q ss_pred eeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccch------HHhhHHhHhhCCCeEEEe
Q 011291 102 FCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSW------NRAMKPLAKTTSSKVLAF 175 (489)
Q Consensus 102 ~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~------~~~~~~L~~~~G~~Vi~~ 175 (489)
.+..|+..|--....-++ ..+..-||++-|.++.-+.. ...+..+++..|-+|+.+
T Consensus 116 ~Iq~D~~~IDt~~I~~~~------------------a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~f 177 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPE------------------AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVF 177 (365)
T ss_pred EEeeCCEEEEEEEeeCCC------------------CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEE
Confidence 445588877665554221 23567899999988776652 234556666668999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc-------CceEEEEEeCcchHHHHHHhhhh
Q 011291 176 DRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA-------AEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 176 D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~-------~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
++||.|.|.+ ..+.++++.|-.+.++.+. .+++++.|||+||.++...+..+
T Consensus 178 NYpGVg~S~G------------------~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 178 NYPGVGSSTG------------------PPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCCccccCCC------------------CCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 9999999974 2356788888777776652 36899999999999988655443
No 144
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.63 E-value=8.4e-08 Score=85.04 Aligned_cols=42 Identities=21% Similarity=0.152 Sum_probs=38.0
Q ss_pred CCCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCC
Q 011291 138 KKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAF 180 (489)
Q Consensus 138 ~~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~ 180 (489)
+++-|.|||-||++++...|..+.-.|+.+ ||-|.++++|.+
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LASh-G~VVaavEHRD~ 156 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASH-GFVVAAVEHRDR 156 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhC-ceEEEEeecccC
Confidence 456789999999999999999999999997 999999999864
No 145
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.63 E-value=2.5e-07 Score=77.99 Aligned_cols=113 Identities=17% Similarity=0.211 Sum_probs=71.0
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCC-CcC-----CCCCCCCCChHHHHHHHH
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTP-DTE-----NKKPLNPYSMAFSVLATL 215 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~dl~ 215 (489)
..||++||.+.+...|..++..|.-. ...-|++.-|-.-.+.-. ..... |.+ .........+...++.+.
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~-NiKwIcP~aP~rpvt~~~---G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~ 79 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLP-NIKWICPTAPSRPVTLNG---GAFMNAWFDIMELSSDAPEDEEGLHRAADNIA 79 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCC-CeeEEcCCCCCCcccccC---CCcccceecceeeCcccchhhhHHHHHHHHHH
Confidence 47999999999999998888877664 677777755422111100 00000 110 001113334555555566
Q ss_pred HHHHHh---c--CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccc
Q 011291 216 YFIDIL---A--AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 258 (489)
Q Consensus 216 ~~l~~l---~--~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~ 258 (489)
.++++. + ..++.+-|.|+||.+++..+..+|..+.+++...+.
T Consensus 80 ~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 80 NLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 666553 2 358999999999999999999888777776666553
No 146
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.55 E-value=7.6e-07 Score=79.00 Aligned_cols=94 Identities=24% Similarity=0.229 Sum_probs=66.9
Q ss_pred EEccCC--CCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH-Hhc
Q 011291 146 LFHGFG--ASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID-ILA 222 (489)
Q Consensus 146 llHG~~--~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~-~l~ 222 (489)
++|..+ ++...|..+...|.. .+.|+++|.+|++.+.. ...+.+++++.+...+. ...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~--~~~v~~~~~~g~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~ 62 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG--RRDVSALPLPGFGPGEP-----------------LPASADALVEAQAEAVLRAAG 62 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC--CccEEEecCCCCCCCCC-----------------CCCCHHHHHHHHHHHHHHhcC
Confidence 344433 566778888888876 48999999999987653 12356666665554443 344
Q ss_pred CceEEEEEeCcchHHHHHHhhhh---hhHHHhHHhhccc
Q 011291 223 AEKAILVGHSAGALVAVNSYFEA---PERVAALILIAPA 258 (489)
Q Consensus 223 ~~~v~liGhS~Gg~ial~~a~~~---p~~v~~lvl~~~~ 258 (489)
..+++++|||+||.++..++... ++.+.+++++++.
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 57899999999999999888764 3457777777653
No 147
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.53 E-value=1.5e-07 Score=91.53 Aligned_cols=95 Identities=19% Similarity=0.118 Sum_probs=69.6
Q ss_pred CCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEe
Q 011291 152 ASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGH 231 (489)
Q Consensus 152 ~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGh 231 (489)
.....|..+++.|.+. ||.+ ..|++|+|.+.+.... ....++++.+.++.+.+..+.++++|+||
T Consensus 105 ~~~~~~~~li~~L~~~-GY~~-~~dL~g~gYDwR~~~~-------------~~~~~~~Lk~lIe~~~~~~g~~kV~LVGH 169 (440)
T PLN02733 105 DEVYYFHDMIEQLIKW-GYKE-GKTLFGFGYDFRQSNR-------------LPETMDGLKKKLETVYKASGGKKVNIISH 169 (440)
T ss_pred chHHHHHHHHHHHHHc-CCcc-CCCcccCCCCcccccc-------------HHHHHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 4557899999999996 8765 8999999998753110 11223444444555555667789999999
Q ss_pred CcchHHHHHHhhhhhhH----HHhHHhhcccccC
Q 011291 232 SAGALVAVNSYFEAPER----VAALILIAPAILA 261 (489)
Q Consensus 232 S~Gg~ial~~a~~~p~~----v~~lvl~~~~~~~ 261 (489)
||||.+++.++..+|+. |+++|+++++...
T Consensus 170 SMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 170 SMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred CHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCC
Confidence 99999999999888864 5667788876543
No 148
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.51 E-value=1.2e-06 Score=85.81 Aligned_cols=124 Identities=15% Similarity=0.018 Sum_probs=84.6
Q ss_pred eecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccc---h--HHhhH---HhHhhCCCeEEEe
Q 011291 104 EFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFS---W--NRAMK---PLAKTTSSKVLAF 175 (489)
Q Consensus 104 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~---~--~~~~~---~L~~~~G~~Vi~~ 175 (489)
.-||++|+..+|.|.+ .++.|+++..+-++-.... + ....+ .++.+ ||.|+..
T Consensus 26 MRDGvrL~~dIy~Pa~------------------~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~-GYavV~q 86 (563)
T COG2936 26 MRDGVRLAADIYRPAG------------------AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQ-GYAVVNQ 86 (563)
T ss_pred ecCCeEEEEEEEccCC------------------CCCCceeEEeeccccccccccCcchhhcccccceeecC-ceEEEEe
Confidence 4599999999998873 4667888888833322221 1 11223 46775 9999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCCCCCCCC-hHHHHHHHHHHHHHh--cCceEEEEEeCcchHHHHHHhhhhhhHHHhH
Q 011291 176 DRPAFGLTSRVFPFQQPTPDTENKKPLNPYS-MAFSVLATLYFIDIL--AAEKAILVGHSAGALVAVNSYFEAPERVAAL 252 (489)
Q Consensus 176 D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dl~~~l~~l--~~~~v~liGhS~Gg~ial~~a~~~p~~v~~l 252 (489)
|.||.|.|++.-.. .++ -.+...|+.+.+... -..+|..+|.|++|+..+.+|+..|-.++++
T Consensus 87 DvRG~~~SeG~~~~--------------~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai 152 (563)
T COG2936 87 DVRGRGGSEGVFDP--------------ESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAI 152 (563)
T ss_pred cccccccCCcccce--------------eccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheee
Confidence 99999999864322 111 112222333333332 2368999999999999999999888789999
Q ss_pred Hhhccccc
Q 011291 253 ILIAPAIL 260 (489)
Q Consensus 253 vl~~~~~~ 260 (489)
+...+...
T Consensus 153 ~p~~~~~D 160 (563)
T COG2936 153 APTEGLVD 160 (563)
T ss_pred cccccccc
Confidence 98887654
No 149
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.43 E-value=8.1e-07 Score=79.86 Aligned_cols=100 Identities=23% Similarity=0.257 Sum_probs=66.8
Q ss_pred CCC-cEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHH-HH
Q 011291 140 IGF-PMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL-YF 217 (489)
Q Consensus 140 ~~p-~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~-~~ 217 (489)
++. .||++-|..+--+. .++..-++ .||.|+.+++||++.|.+.+.. ..+. ..++.+. -.
T Consensus 241 ngq~LvIC~EGNAGFYEv--G~m~tP~~-lgYsvLGwNhPGFagSTG~P~p--------------~n~~-nA~DaVvQfA 302 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEV--GVMNTPAQ-LGYSVLGWNHPGFAGSTGLPYP--------------VNTL-NAADAVVQFA 302 (517)
T ss_pred CCceEEEEecCCccceEe--eeecChHH-hCceeeccCCCCccccCCCCCc--------------ccch-HHHHHHHHHH
Confidence 444 45666665443222 23333344 4999999999999999875432 1222 2222233 33
Q ss_pred HHHhcC--ceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccc
Q 011291 218 IDILAA--EKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 258 (489)
Q Consensus 218 l~~l~~--~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~ 258 (489)
|+.++. +.++|.|||.||+.+..+|..||+ |+++|+-++.
T Consensus 303 I~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 303 IQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 455654 689999999999999999999996 9999988764
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.39 E-value=7.4e-06 Score=70.93 Aligned_cols=114 Identities=19% Similarity=0.092 Sum_probs=72.8
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCC-----CeEEEeCCCCC----CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHH
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTS-----SKVLAFDRPAF----GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVL 212 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G-----~~Vi~~D~~G~----G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (489)
-|.|||||.+|+......++.+|..+ + --++.+|--|- |.=++....+..+... .....+..++..
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~-~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gf----e~n~~s~~~~s~ 120 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPD-YKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGF----EDNTASGLDQSK 120 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhc-ccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEE----ecCcCchhhHHH
Confidence 47899999999999999999998875 2 12556666551 2212111110000011 112233334444
Q ss_pred HHHHHH----HHhcCceEEEEEeCcchHHHHHHhhhhhh-----HHHhHHhhccccc
Q 011291 213 ATLYFI----DILAAEKAILVGHSAGALVAVNSYFEAPE-----RVAALILIAPAIL 260 (489)
Q Consensus 213 dl~~~l----~~l~~~~v~liGhS~Gg~ial~~a~~~p~-----~v~~lvl~~~~~~ 260 (489)
.+..++ ++.+++++.++||||||.-...|+..+.+ .+..+|.++++..
T Consensus 121 wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 121 WLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 444444 55688999999999999999988887532 4899999988764
No 151
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.36 E-value=3e-05 Score=65.68 Aligned_cols=101 Identities=18% Similarity=0.201 Sum_probs=76.0
Q ss_pred CCcEEEEccCCCCccc---hHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 141 GFPMVLFHGFGASVFS---WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~---~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
.-.||||-|++..--. -..+...|.+. +|.++-+-++.+- .-++..++.+.++|+..+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~-~wslVq~q~~Ssy------------------~G~Gt~slk~D~edl~~l 96 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDEN-SWSLVQPQLRSSY------------------NGYGTFSLKDDVEDLKCL 96 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhc-cceeeeeeccccc------------------cccccccccccHHHHHHH
Confidence 3468899888765432 34566777776 8999999876321 123567888999999999
Q ss_pred HHHhcC----ceEEEEEeCcchHHHHHHhh--hhhhHHHhHHhhccccc
Q 011291 218 IDILAA----EKAILVGHSAGALVAVNSYF--EAPERVAALILIAPAIL 260 (489)
Q Consensus 218 l~~l~~----~~v~liGhS~Gg~ial~~a~--~~p~~v~~lvl~~~~~~ 260 (489)
+++++. .+|+++|||.|+.=.+.|.. .-+..+++.|+.+|...
T Consensus 97 ~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 97 LEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred HHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 999854 38999999999998887773 24667999999998753
No 152
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.34 E-value=6.3e-06 Score=80.19 Aligned_cols=106 Identities=19% Similarity=0.170 Sum_probs=65.7
Q ss_pred CCCcEEEEccCCCCc-cchHHhhHHhHhhCC----CeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHH
Q 011291 140 IGFPMVLFHGFGASV-FSWNRAMKPLAKTTS----SKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLAT 214 (489)
Q Consensus 140 ~~p~VlllHG~~~~~-~~~~~~~~~L~~~~G----~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 214 (489)
+.|.|+|+||..-.. .....+++.|..+ | ..|+.+|..+. ..+.... .....-...+++++
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~-g~i~P~ivV~id~~~~--~~R~~el-----------~~~~~f~~~l~~eL 273 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHR-GQLPPAVYLLIDAIDT--THRSQEL-----------PCNADFWLAVQQEL 273 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHc-CCCCceEEEEECCCCc--ccccccC-----------CchHHHHHHHHHHH
Confidence 468888999854211 1123445666664 4 34677875321 1111000 00111233445566
Q ss_pred HHHHHHh-----cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 215 LYFIDIL-----AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 215 ~~~l~~l-----~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
.-++++. +.++.+|+|+||||+.|+.++.++|+++.+++.+++..
T Consensus 274 lP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 274 LPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 6666553 34578999999999999999999999999999999853
No 153
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.33 E-value=2.3e-06 Score=76.59 Aligned_cols=106 Identities=25% Similarity=0.240 Sum_probs=67.3
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCC--eEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSS--KVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY 216 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~--~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ 216 (489)
.++..+|||||+..+...-..-...+....|+ .++.+.||..|.-..- .....+...-..++..
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y--------------~~d~~~a~~s~~~l~~ 81 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGY--------------FYDRESARFSGPALAR 81 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhh--------------hhhhhhHHHHHHHHHH
Confidence 35679999999998865533333334443344 7999999988763210 1111233344445555
Q ss_pred HHHHh----cCceEEEEEeCcchHHHHHHhhhh----h-----hHHHhHHhhccc
Q 011291 217 FIDIL----AAEKAILVGHSAGALVAVNSYFEA----P-----ERVAALILIAPA 258 (489)
Q Consensus 217 ~l~~l----~~~~v~liGhS~Gg~ial~~a~~~----p-----~~v~~lvl~~~~ 258 (489)
+++.+ +.++|+|++||||+.+.+...... . .++..+|+++|-
T Consensus 82 ~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 82 FLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred HHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 55554 568999999999999998765432 1 246666777664
No 154
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.29 E-value=3.6e-06 Score=81.36 Aligned_cols=67 Identities=22% Similarity=0.316 Sum_probs=51.4
Q ss_pred hhcccCCccEEEEecCCCCCCCchhHHHHHhhCC-CCEEEEecCCCCCCcccc---------HHHHHHHHHHHHHHh
Q 011291 408 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP-GSTFEVIKNCGHVPQEEK---------VEEFVSIVARFLQRA 474 (489)
Q Consensus 408 ~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~-~~~~~~i~g~gH~~~~e~---------p~~v~~~i~~fl~~~ 474 (489)
+.+-.++.||||+.|.+|..++++..+.++++.. ..+++++.+++|.+-... ..+|...|.+|+.+.
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 3455678999999999999999999999998885 478999999999764422 245555555555544
No 155
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.28 E-value=1.8e-07 Score=87.82 Aligned_cols=107 Identities=21% Similarity=0.219 Sum_probs=62.0
Q ss_pred CCCCcEEEEccCCCCc--cchH-HhhHHhHhh--CCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHH
Q 011291 139 KIGFPMVLFHGFGASV--FSWN-RAMKPLAKT--TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA 213 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~--~~~~-~~~~~L~~~--~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 213 (489)
.+.|++|++|||.++. ..|. .+...+... ..+.||++|+...-...- .............
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y---------------~~a~~n~~~vg~~ 133 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNY---------------PQAVANTRLVGRQ 133 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-H---------------HHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccc---------------cchhhhHHHHHHH
Confidence 3578999999998877 3453 455555443 379999999953211100 0001112233333
Q ss_pred HHHHHHHh------cCceEEEEEeCcchHHHHHHhhhhhh--HHHhHHhhccccc
Q 011291 214 TLYFIDIL------AAEKAILVGHSAGALVAVNSYFEAPE--RVAALILIAPAIL 260 (489)
Q Consensus 214 l~~~l~~l------~~~~v~liGhS~Gg~ial~~a~~~p~--~v~~lvl~~~~~~ 260 (489)
|..+|..| ..++++|||||+||.+|-.++..... +|..|+.++|+..
T Consensus 134 la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 134 LAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 44444333 45799999999999999977766655 7889999998864
No 156
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.23 E-value=0.0001 Score=68.99 Aligned_cols=117 Identities=15% Similarity=0.083 Sum_probs=67.1
Q ss_pred CcEEEEccCCCCccc---hHHhhHHhHhhCCCeEEEeCCCC--CCCCCCCCCCCCC--CCCcCCCCCCC-----------
Q 011291 142 FPMVLFHGFGASVFS---WNRAMKPLAKTTSSKVLAFDRPA--FGLTSRVFPFQQP--TPDTENKKPLN----------- 203 (489)
Q Consensus 142 p~VlllHG~~~~~~~---~~~~~~~L~~~~G~~Vi~~D~~G--~G~S~~~~~~~~~--~~~~~~~~~~~----------- 203 (489)
-.||+|||.+.+... ...+-..|.+. |+..+.+.+|. ............. ...........
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~L~~~-GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRELPDH-GWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHHhhhc-CceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 479999999887633 34455667675 99999999887 1111110000000 00000000000
Q ss_pred ---CCChHHHHHHHHHHH---HHhcCceEEEEEeCcchHHHHHHhhhhhh-HHHhHHhhcccc
Q 011291 204 ---PYSMAFSVLATLYFI---DILAAEKAILVGHSAGALVAVNSYFEAPE-RVAALILIAPAI 259 (489)
Q Consensus 204 ---~~~~~~~~~dl~~~l---~~l~~~~v~liGhS~Gg~ial~~a~~~p~-~v~~lvl~~~~~ 259 (489)
......+..-|.+++ ...+..+++||||+.|+.+++.+....+. .++++|++++..
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 000112222233333 33355679999999999999999887754 489999999753
No 157
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.14 E-value=7.5e-06 Score=62.97 Aligned_cols=62 Identities=21% Similarity=0.334 Sum_probs=56.3
Q ss_pred CCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHHHh
Q 011291 413 ISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 474 (489)
Q Consensus 413 i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~ 474 (489)
-..|+|+|.++.|+.+|.+.++.+.+.+++++++.+++.||..+......+.+.+.+||..-
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 35999999999999999999999999999999999999999988666678899999999753
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=98.14 E-value=6e-05 Score=61.03 Aligned_cols=91 Identities=20% Similarity=0.236 Sum_probs=64.6
Q ss_pred EEEEccCCCCccchHHhh-HHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc
Q 011291 144 MVLFHGFGASVFSWNRAM-KPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 222 (489)
Q Consensus 144 VlllHG~~~~~~~~~~~~-~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~ 222 (489)
||+||||.++........ ..+.. .|.|-.+.+.. .-..+....++.++.++..++
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~--------~~~~~i~y~~p----------------~l~h~p~~a~~ele~~i~~~~ 57 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFID--------EDVRDIEYSTP----------------HLPHDPQQALKELEKAVQELG 57 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHh--------ccccceeeecC----------------CCCCCHHHHHHHHHHHHHHcC
Confidence 899999999888865532 22222 22333344432 234578889999999999999
Q ss_pred CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccC
Q 011291 223 AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILA 261 (489)
Q Consensus 223 ~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~ 261 (489)
.+...|+|.|+||+.|.+++.++. +++ |+++|...+
T Consensus 58 ~~~p~ivGssLGGY~At~l~~~~G--ira-v~~NPav~P 93 (191)
T COG3150 58 DESPLIVGSSLGGYYATWLGFLCG--IRA-VVFNPAVRP 93 (191)
T ss_pred CCCceEEeecchHHHHHHHHHHhC--Chh-hhcCCCcCc
Confidence 888999999999999999998764 444 456776543
No 159
>PLN02209 serine carboxypeptidase
Probab=98.13 E-value=0.00077 Score=66.09 Aligned_cols=59 Identities=24% Similarity=0.364 Sum_probs=48.0
Q ss_pred CccEEEEecCCCCCCCchhHHHHHhhCC------------------------C-CEEEEecCCCCCCccccHHHHHHHHH
Q 011291 414 SCPVLIVTGDTDRIVPSWNAERLSRAIP------------------------G-STFEVIKNCGHVPQEEKVEEFVSIVA 468 (489)
Q Consensus 414 ~~PvLii~G~~D~~vp~~~~~~l~~~~~------------------------~-~~~~~i~g~gH~~~~e~p~~v~~~i~ 468 (489)
.++||+.+|+.|.+|+....+.+.+.+. + .+++.+.|+||++. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 5899999999999999876776665552 2 35667889999996 59999999999
Q ss_pred HHHHH
Q 011291 469 RFLQR 473 (489)
Q Consensus 469 ~fl~~ 473 (489)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 160
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.13 E-value=0.00032 Score=68.76 Aligned_cols=59 Identities=27% Similarity=0.411 Sum_probs=48.0
Q ss_pred CccEEEEecCCCCCCCchhHHHHHhhCC------------------------C-CEEEEecCCCCCCccccHHHHHHHHH
Q 011291 414 SCPVLIVTGDTDRIVPSWNAERLSRAIP------------------------G-STFEVIKNCGHVPQEEKVEEFVSIVA 468 (489)
Q Consensus 414 ~~PvLii~G~~D~~vp~~~~~~l~~~~~------------------------~-~~~~~i~g~gH~~~~e~p~~v~~~i~ 468 (489)
..+||+..|+.|.+|+....+.+.+.+. + .+++.+.++||++. .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5899999999999999877777665552 1 35667889999996 58999999999
Q ss_pred HHHHH
Q 011291 469 RFLQR 473 (489)
Q Consensus 469 ~fl~~ 473 (489)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99964
No 161
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.11 E-value=0.00068 Score=65.91 Aligned_cols=61 Identities=31% Similarity=0.559 Sum_probs=48.8
Q ss_pred CccEEEEecCCCCCCCchhHHHHHhhC---------C----------------CCEEEEecCCCCCCccccHHHHHHHHH
Q 011291 414 SCPVLIVTGDTDRIVPSWNAERLSRAI---------P----------------GSTFEVIKNCGHVPQEEKVEEFVSIVA 468 (489)
Q Consensus 414 ~~PvLii~G~~D~~vp~~~~~~l~~~~---------~----------------~~~~~~i~g~gH~~~~e~p~~v~~~i~ 468 (489)
..++||..|+.|.++|....+.+.+.+ | +..+..+.|+||++..++|+.....+.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 489999999999999987666654433 1 123467889999999999999989999
Q ss_pred HHHHHh
Q 011291 469 RFLQRA 474 (489)
Q Consensus 469 ~fl~~~ 474 (489)
.||...
T Consensus 443 ~fl~g~ 448 (454)
T KOG1282|consen 443 RFLNGQ 448 (454)
T ss_pred HHHcCC
Confidence 999764
No 162
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.10 E-value=4e-05 Score=71.91 Aligned_cols=71 Identities=30% Similarity=0.444 Sum_probs=56.6
Q ss_pred hhhhhcccCC-ccEEEEecCCCCCCCchhHHHHHhhCCC--CEEEEecCCCCCCcccc-H--HHHHHHHHHHHHHhh
Q 011291 405 PLAKRLHEIS-CPVLIVTGDTDRIVPSWNAERLSRAIPG--STFEVIKNCGHVPQEEK-V--EEFVSIVARFLQRAF 475 (489)
Q Consensus 405 ~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~~~~--~~~~~i~g~gH~~~~e~-p--~~v~~~i~~fl~~~~ 475 (489)
+....+.++. +|+|+++|++|..+|...+..+...... .+...+++++|...... + ++..+.+.+|+.+.+
T Consensus 222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 4445556666 8999999999999999998888887766 57888899999887643 3 378889999998764
No 163
>PLN02606 palmitoyl-protein thioesterase
Probab=98.09 E-value=0.00011 Score=66.79 Aligned_cols=100 Identities=21% Similarity=0.163 Sum_probs=64.8
Q ss_pred CCcEEEEccCC--CCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 141 GFPMVLFHGFG--ASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 141 ~p~VlllHG~~--~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
..|||+.||++ ++...+..+.+.+.+..|+.+..+- .|-+... .--..+.+.++.+.+-+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~-----------------s~~~~~~~Qv~~vce~l 87 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD-----------------SLFMPLRQQASIACEKI 87 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc-----------------ccccCHHHHHHHHHHHH
Confidence 46899999999 5555666666666422356555554 2222210 01134455555554444
Q ss_pred HH---hcCceEEEEEeCcchHHHHHHhhhhhh--HHHhHHhhcccc
Q 011291 219 DI---LAAEKAILVGHSAGALVAVNSYFEAPE--RVAALILIAPAI 259 (489)
Q Consensus 219 ~~---l~~~~v~liGhS~Gg~ial~~a~~~p~--~v~~lvl~~~~~ 259 (489)
.. +. +-+++||+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 88 ~~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 88 KQMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred hcchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 33 22 359999999999999999999876 499999998764
No 164
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.08 E-value=2.4e-05 Score=65.74 Aligned_cols=119 Identities=20% Similarity=0.193 Sum_probs=72.2
Q ss_pred CCcEEEEccCCCCccchHH--hhHHhHhhCCCeEEEeCC--CCC---CCCCCCCCCCCCCCCcCCC--CCCC-CCChHHH
Q 011291 141 GFPMVLFHGFGASVFSWNR--AMKPLAKTTSSKVLAFDR--PAF---GLTSRVFPFQQPTPDTENK--KPLN-PYSMAFS 210 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~~~~--~~~~L~~~~G~~Vi~~D~--~G~---G~S~~~~~~~~~~~~~~~~--~~~~-~~~~~~~ 210 (489)
-|++.++.|+.++.+.|.. ..+..+.+.|+.|+.+|- ||. |.++.-. .+.......+. .++. .|.+.++
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswD-FG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWD-FGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCccccc-ccCCceeEEecccchHhhhhhHHHH
Confidence 5788999999999888743 345555556999999994 442 2222100 00000000000 0111 1222222
Q ss_pred -HHHHHHHHHH----hcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 211 -VLATLYFIDI----LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 211 -~~dl~~~l~~----l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
++.+.+++.. ++..++.|.||||||.=|+..+.+.|.+.+++-..+|...
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 2344444442 3445899999999999999999999999888888877653
No 165
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.05 E-value=0.00042 Score=60.52 Aligned_cols=58 Identities=22% Similarity=0.330 Sum_probs=49.5
Q ss_pred EEEEecCCCCCCCchhHHHHHhhCCCCEEEEecCCCCCC-ccccHHHHHHHHHHHHHHhh
Q 011291 417 VLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVP-QEEKVEEFVSIVARFLQRAF 475 (489)
Q Consensus 417 vLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g~gH~~-~~e~p~~v~~~i~~fl~~~~ 475 (489)
+.++..++|.++|......+.+..|++++..++ .||.- ++-+-+++.+.|.+-|++.-
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 578889999999998899999999999999999 59954 55677889999999887754
No 166
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.02 E-value=4.3e-05 Score=77.45 Aligned_cols=108 Identities=19% Similarity=0.122 Sum_probs=67.8
Q ss_pred CCCCcEEEEccCCCC---ccchHHhhHHhHhhCC-CeEEEeCCC-C---CCCCCCCCCCCCCCCCcCCCCCCCCCChHHH
Q 011291 139 KIGFPMVLFHGFGAS---VFSWNRAMKPLAKTTS-SKVLAFDRP-A---FGLTSRVFPFQQPTPDTENKKPLNPYSMAFS 210 (489)
Q Consensus 139 ~~~p~VlllHG~~~~---~~~~~~~~~~L~~~~G-~~Vi~~D~~-G---~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (489)
.+.|.||+|||++.. ...+ ....|+...+ +.|+.+++| | +..+... ...+...+.|.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-------------~~~~n~g~~D~ 157 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-------------ELPGNYGLKDQ 157 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC-------------CCCcchhHHHH
Confidence 356899999997632 2222 3345555434 899999999 4 3322211 11123334444
Q ss_pred HHHHH---HHHHHhc--CceEEEEEeCcchHHHHHHhhh--hhhHHHhHHhhcccccC
Q 011291 211 VLATL---YFIDILA--AEKAILVGHSAGALVAVNSYFE--APERVAALILIAPAILA 261 (489)
Q Consensus 211 ~~dl~---~~l~~l~--~~~v~liGhS~Gg~ial~~a~~--~p~~v~~lvl~~~~~~~ 261 (489)
...+. +.++..+ .++|.|+|+|.||.++..++.. .+..++++|++++....
T Consensus 158 ~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 158 RLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred HHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 44433 3344444 4689999999999999877765 34579999999886543
No 167
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.01 E-value=0.00014 Score=66.01 Aligned_cols=60 Identities=18% Similarity=0.334 Sum_probs=49.6
Q ss_pred cCCccEEEEecCCCCCCCchhHHHHHhhCC----CCEEEEecCCCCCCcc-ccHHHHHHHHHHHH
Q 011291 412 EISCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQE-EKVEEFVSIVARFL 471 (489)
Q Consensus 412 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~~----~~~~~~i~g~gH~~~~-e~p~~v~~~i~~fl 471 (489)
...+|-|+++++.|.+++.+..++.++... +++...++++.|..|+ .+|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 446999999999999999887777665543 3678889999998877 57999999999885
No 168
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.99 E-value=0.00016 Score=71.55 Aligned_cols=114 Identities=16% Similarity=0.054 Sum_probs=80.6
Q ss_pred CCCCCcEEEEccCCCCcc--chHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCC-CCCCChHHHHHHH
Q 011291 138 KKIGFPMVLFHGFGASVF--SWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKP-LNPYSMAFSVLAT 214 (489)
Q Consensus 138 ~~~~p~VlllHG~~~~~~--~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dl 214 (489)
.++.|++|+.-|.-+.+. .|....-.|..+ ||---...-||=|.-.+ .|.++++. ....++.|.++..
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~--------~WYe~GK~l~K~NTf~DFIa~a 515 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFSIARLSLLDR-GFVYAIAHVRGGGELGR--------AWYEDGKLLNKKNTFTDFIAAA 515 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcccceeeeecC-ceEEEEEEeecccccCh--------HHHHhhhhhhccccHHHHHHHH
Confidence 356778888777655443 244444556676 88777777888766543 23333332 3346788888888
Q ss_pred HHHHHHh--cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 215 LYFIDIL--AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 215 ~~~l~~l--~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
.++++.= ..+.++++|.|.||+++-..+...|+.++++|+--|...
T Consensus 516 ~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 516 RHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred HHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 7777652 346899999999999999999999999999998887654
No 169
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.98 E-value=1.4e-05 Score=79.39 Aligned_cols=111 Identities=18% Similarity=0.195 Sum_probs=74.5
Q ss_pred CCcEEEEccCCCCccch---HHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 141 GFPMVLFHGFGASVFSW---NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~~---~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
+|.+|++ |+-+....+ ..++..|+++.|-.|+++++|.+|.|.+.... ........+.++..+|+..+
T Consensus 29 gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~--------s~~nL~yLt~~QALaD~a~F 99 (434)
T PF05577_consen 29 GPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDL--------STENLRYLTSEQALADLAYF 99 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGG--------GGSTTTC-SHHHHHHHHHHH
T ss_pred CCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCcccc--------chhhHHhcCHHHHHHHHHHH
Confidence 5555555 554444322 23567788877889999999999999854332 13356778999999999999
Q ss_pred HHHhc-------CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 218 IDILA-------AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 218 l~~l~-------~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
++++. ..|++++|.|+||++|..+-.+||+.|.+.+.-++++.
T Consensus 100 ~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 100 IRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 98764 13899999999999999999999999888887776653
No 170
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.96 E-value=8e-06 Score=77.49 Aligned_cols=101 Identities=22% Similarity=0.120 Sum_probs=77.2
Q ss_pred CCcEEEEccCCCCccchHHhhHHhHhhCCCe---EEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 141 GFPMVLFHGFGASVFSWNRAMKPLAKTTSSK---VLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~---Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
.-+++++||+..+...|..+...+... |+. ++.++.++. .... ......+.+..-+..+
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~-~~~~----------------~~~~~~~ql~~~V~~~ 120 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAIL-GWLTNGVYAFELSGG-DGTY----------------SLAVRGEQLFAYVDEV 120 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcch-HHHhccccccccccc-CCCc----------------cccccHHHHHHHHHHH
Confidence 358999999988888888877777764 777 899998865 1111 1223455555566677
Q ss_pred HHHhcCceEEEEEeCcchHHHHHHhhhhh--hHHHhHHhhcccc
Q 011291 218 IDILAAEKAILVGHSAGALVAVNSYFEAP--ERVAALILIAPAI 259 (489)
Q Consensus 218 l~~l~~~~v~liGhS~Gg~ial~~a~~~p--~~v~~lvl~~~~~ 259 (489)
+...+.+++.++||||||.++..++...+ .+|+.++.++++-
T Consensus 121 l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 121 LAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred HhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 77778899999999999999998888777 7899999988764
No 171
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.96 E-value=8.2e-06 Score=74.72 Aligned_cols=51 Identities=22% Similarity=0.379 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHH-hcCc--eEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 209 FSVLATLYFIDI-LAAE--KAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 209 ~~~~dl~~~l~~-l~~~--~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
.+.++|..+|+. +... +..|+|+||||+.|+.++.++|+.+.++++++|..
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 344566666654 3322 37999999999999999999999999999999874
No 172
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.88 E-value=6.6e-05 Score=73.20 Aligned_cols=135 Identities=13% Similarity=0.057 Sum_probs=82.5
Q ss_pred CceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCcc--chHHhhHHhHhhCCCeEEEeCC
Q 011291 100 SCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVF--SWNRAMKPLAKTTSSKVLAFDR 177 (489)
Q Consensus 100 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~--~~~~~~~~L~~~~G~~Vi~~D~ 177 (489)
....+-||.+|.|.+.+ ++. +.+ +.|++|+--|+..-+. .|......+.++ |..-+..+.
T Consensus 397 ~~atSkDGT~IPYFiv~-K~~---------------~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLer-Gg~~v~ANI 458 (648)
T COG1505 397 FFATSKDGTRIPYFIVR-KGA---------------KKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLER-GGVFVLANI 458 (648)
T ss_pred EEEEcCCCccccEEEEe-cCC---------------cCC-CCceEEEeccccccccCCccchhhHHHHhc-CCeEEEEec
Confidence 33445699999999886 310 002 4677666555543332 255666777786 888889999
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH--hcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhh
Q 011291 178 PAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI--LAAEKAILVGHSAGALVAVNSYFEAPERVAALILI 255 (489)
Q Consensus 178 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~ 255 (489)
||-|+=...-+. ..-......-++|.++-..+++++ ...+++.|.|.|-||.+.-....++|+.+.++|+-
T Consensus 459 RGGGEfGp~WH~-------Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~e 531 (648)
T COG1505 459 RGGGEFGPEWHQ-------AGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCE 531 (648)
T ss_pred ccCCccCHHHHH-------HHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeec
Confidence 997764321000 000011122334444444444433 13468999999999999988888999988888877
Q ss_pred cccc
Q 011291 256 APAI 259 (489)
Q Consensus 256 ~~~~ 259 (489)
-|..
T Consensus 532 vPll 535 (648)
T COG1505 532 VPLL 535 (648)
T ss_pred cchh
Confidence 6654
No 173
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.87 E-value=0.00036 Score=63.47 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=66.0
Q ss_pred CCcEEEEccCCCCccc--hHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 141 GFPMVLFHGFGASVFS--WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~--~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
..|||+.||+|.+... ...+.+.+....|..|.++.. |.+.. ..-...+.+.++.+.+-+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~---------------~s~~~~~~~Qve~vce~l 86 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVG---------------DSWLMPLTQQAEIACEKV 86 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCcc---------------ccceeCHHHHHHHHHHHH
Confidence 4689999999976543 334444443334777777654 33321 112234555555555544
Q ss_pred HHhc--CceEEEEEeCcchHHHHHHhhhhhh--HHHhHHhhcccc
Q 011291 219 DILA--AEKAILVGHSAGALVAVNSYFEAPE--RVAALILIAPAI 259 (489)
Q Consensus 219 ~~l~--~~~v~liGhS~Gg~ial~~a~~~p~--~v~~lvl~~~~~ 259 (489)
.... .+-+++||+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 87 ~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 87 KQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred hhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 3321 1359999999999999999998876 599999998764
No 174
>COG0627 Predicted esterase [General function prediction only]
Probab=97.85 E-value=9.6e-05 Score=68.72 Aligned_cols=123 Identities=14% Similarity=0.084 Sum_probs=69.1
Q ss_pred CCCcEEEEccCCCCccchH--HhhHHhHhhCCCeEEEeCC--CCCCCCCCC--CC---CCCCCCCcCCCCCCCCCChHHH
Q 011291 140 IGFPMVLFHGFGASVFSWN--RAMKPLAKTTSSKVLAFDR--PAFGLTSRV--FP---FQQPTPDTENKKPLNPYSMAFS 210 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~--~~~~~L~~~~G~~Vi~~D~--~G~G~S~~~--~~---~~~~~~~~~~~~~~~~~~~~~~ 210 (489)
+-|+++++||..++...|. .-++..+...|+.++++|- ++.+.-... +. ..+-..+.+.....+.+.++++
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 3466778888877753332 2234444445777777632 222221110 00 0000111111111112444443
Q ss_pred H-HHHHHHHHHhcC-----ceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccCc
Q 011291 211 V-LATLYFIDILAA-----EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAP 262 (489)
Q Consensus 211 ~-~dl~~~l~~l~~-----~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~~ 262 (489)
+ ..+-+++++... ++..|+||||||+=|+.+|+++|+++..+..+++...+.
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 3 345544443322 378999999999999999999999999999999886544
No 175
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.84 E-value=2.3e-05 Score=69.59 Aligned_cols=86 Identities=16% Similarity=0.092 Sum_probs=48.1
Q ss_pred CCcEEEEccCCCCccchHHhhHHhHhh-CCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHH----HHH
Q 011291 141 GFPMVLFHGFGASVFSWNRAMKPLAKT-TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVL----ATL 215 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~~~~~~~~L~~~-~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----dl~ 215 (489)
...||++||+.++..+|..+...+... ..+.--.+...++-... .....+++..++ .|.
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~----------------~~T~~gI~~~g~rL~~eI~ 67 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNE----------------FKTFDGIDVCGERLAEEIL 67 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccc----------------cccchhhHHHHHHHHHHHH
Confidence 457999999999999998777666651 01211111222211111 001123444443 333
Q ss_pred HHHHHhcC--ceEEEEEeCcchHHHHHHh
Q 011291 216 YFIDILAA--EKAILVGHSAGALVAVNSY 242 (489)
Q Consensus 216 ~~l~~l~~--~~v~liGhS~Gg~ial~~a 242 (489)
..++.... .++.+|||||||.++-.+.
T Consensus 68 ~~~~~~~~~~~~IsfIgHSLGGli~r~al 96 (217)
T PF05057_consen 68 EHIKDYESKIRKISFIGHSLGGLIARYAL 96 (217)
T ss_pred HhccccccccccceEEEecccHHHHHHHH
Confidence 33333333 4899999999999986443
No 176
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.83 E-value=0.00011 Score=68.45 Aligned_cols=113 Identities=13% Similarity=0.147 Sum_probs=87.2
Q ss_pred CcEEEEccCCCCccchHH---hhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 142 FPMVLFHGFGASVFSWNR---AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~---~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
-||++..|.-++.+.|.. ++-.++.+.+--+|..++|-+|+|.+.-.. ...+....+..+.++..+|...++
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~-----s~k~~~hlgyLtseQALADfA~ll 155 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQ-----SYKDARHLGYLTSEQALADFAELL 155 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcch-----hccChhhhccccHHHHHHHHHHHH
Confidence 578888898887766643 455666666778999999999999754221 233455667788899999999999
Q ss_pred HHhcC------ceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 219 DILAA------EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 219 ~~l~~------~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
.+++. .+|+.+|.|+|||++..+=.+||+.|.+...-+.+.
T Consensus 156 ~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 156 TFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred HHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 88753 379999999999999999999999888776655443
No 177
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.83 E-value=0.0012 Score=61.55 Aligned_cols=92 Identities=22% Similarity=0.229 Sum_probs=61.8
Q ss_pred EEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh--
Q 011291 144 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL-- 221 (489)
Q Consensus 144 VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l-- 221 (489)
-||+.|=|+....=..+...|.++ |+.|+.+|-.-|=.|. .+.++.++|+..+++..
T Consensus 263 av~~SGDGGWr~lDk~v~~~l~~~-gvpVvGvdsLRYfW~~--------------------rtPe~~a~Dl~r~i~~y~~ 321 (456)
T COG3946 263 AVFYSGDGGWRDLDKEVAEALQKQ-GVPVVGVDSLRYFWSE--------------------RTPEQIAADLSRLIRFYAR 321 (456)
T ss_pred EEEEecCCchhhhhHHHHHHHHHC-CCceeeeehhhhhhcc--------------------CCHHHHHHHHHHHHHHHHH
Confidence 345555444333334567788886 9999999965444443 46678888888888664
Q ss_pred --cCceEEEEEeCcchHHHHHHhhhhh----hHHHhHHhhc
Q 011291 222 --AAEKAILVGHSAGALVAVNSYFEAP----ERVAALILIA 256 (489)
Q Consensus 222 --~~~~v~liGhS~Gg~ial~~a~~~p----~~v~~lvl~~ 256 (489)
+..++.|+|+|+|+=+.-..-.+.| ++|+.+.|++
T Consensus 322 ~w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~ 362 (456)
T COG3946 322 RWGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLG 362 (456)
T ss_pred hhCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHh
Confidence 6689999999999987664443333 3555555554
No 178
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.82 E-value=0.0002 Score=67.64 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=58.3
Q ss_pred hhhhhcccCCccEEEEecCCCCCCCchhHHHHHhhCCC-CEEEEecCCCCCCccccHHHHHHHHHHHHHHhhCC
Q 011291 405 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG-STFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFGY 477 (489)
Q Consensus 405 ~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~-~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~~~~ 477 (489)
|+.....++++|.++|.|..|.+..+.....+...+|+ ..+..+|+++|.... ..+.+.|..|+......
T Consensus 253 DP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 253 DPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred CHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHHcC
Confidence 45555577799999999999999999999999999986 467778999998865 66788899999886543
No 179
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.77 E-value=0.00033 Score=65.97 Aligned_cols=104 Identities=19% Similarity=0.189 Sum_probs=66.6
Q ss_pred CCCcEEEEccCCCCccchHHh------hHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRA------MKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA 213 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~------~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 213 (489)
..|.||++||+|-........ +..+.++ ..++++|+.-...-.. ...-+..+.+.++-
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~--~SILvLDYsLt~~~~~--------------~~~yPtQL~qlv~~ 184 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPE--VSILVLDYSLTSSDEH--------------GHKYPTQLRQLVAT 184 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCC--CeEEEEeccccccccC--------------CCcCchHHHHHHHH
Confidence 468999999998544332221 1222233 5888888764330000 01234566777777
Q ss_pred HHHHHHHhcCceEEEEEeCcchHHHHHHhhhhh--h---HHHhHHhhcccc
Q 011291 214 TLYFIDILAAEKAILVGHSAGALVAVNSYFEAP--E---RVAALILIAPAI 259 (489)
Q Consensus 214 l~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p--~---~v~~lvl~~~~~ 259 (489)
...+++..+.++|+|+|-|.||.+++.+.+... + .-+++|+++|-.
T Consensus 185 Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 185 YDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred HHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 778887788899999999999999998765321 1 235677777654
No 180
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.76 E-value=0.0002 Score=68.87 Aligned_cols=115 Identities=19% Similarity=0.077 Sum_probs=71.0
Q ss_pred CCCCcEEEEccCC---CCccchHHhhHHhHhhCCCeEEEeCCC-C-CCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHH
Q 011291 139 KIGFPMVLFHGFG---ASVFSWNRAMKPLAKTTSSKVLAFDRP-A-FGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA 213 (489)
Q Consensus 139 ~~~p~VlllHG~~---~~~~~~~~~~~~L~~~~G~~Vi~~D~~-G-~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 213 (489)
.+.|.+|+|||++ |+......--..|+++.++-|+.+|+| | .|.=+.+.... .........+.|.+..
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~-------~~~~~~n~Gl~DqilA 164 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDT-------EDAFASNLGLLDQILA 164 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccc-------cccccccccHHHHHHH
Confidence 3468999999986 333333344567888723999999998 2 33222111110 0001112344555444
Q ss_pred ---HHHHHHHhcC--ceEEEEEeCcchHHHHHHhhh--hhhHHHhHHhhccccc
Q 011291 214 ---TLYFIDILAA--EKAILVGHSAGALVAVNSYFE--APERVAALILIAPAIL 260 (489)
Q Consensus 214 ---l~~~l~~l~~--~~v~liGhS~Gg~ial~~a~~--~p~~v~~lvl~~~~~~ 260 (489)
+.+-|+++|. +.|.|+|+|.|++.++.+.+. ....++++|+.++...
T Consensus 165 LkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 165 LKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 4455566654 579999999999998866553 2347999999998764
No 181
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.63 E-value=0.00036 Score=60.50 Aligned_cols=80 Identities=16% Similarity=0.252 Sum_probs=52.5
Q ss_pred CCcEEEEccCCCCccchHHhhHHhHhhCCCe-EEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 141 GFPMVLFHGFGASVFSWNRAMKPLAKTTSSK-VLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~-Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
...||+..|++.+...+.++.. .. +|. ++++|+|.-- ++. |
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~---~~-~~D~l~~yDYr~l~-------------------------~d~---~------ 52 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL---PE-NYDVLICYDYRDLD-------------------------FDF---D------ 52 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC---CC-CccEEEEecCcccc-------------------------ccc---c------
Confidence 4689999999998877665431 21 455 4567876211 100 1
Q ss_pred HhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 220 ILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 220 ~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
--+.+++.|||+|||-.+|..+....| ++..|.+++...
T Consensus 53 ~~~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 53 LSGYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred cccCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCC
Confidence 124589999999999999987765443 666677776543
No 182
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.55 E-value=0.00024 Score=65.39 Aligned_cols=110 Identities=19% Similarity=0.264 Sum_probs=64.8
Q ss_pred CCCCcEEEEccCCCCccc-hHHhhHHhHhhCC--CeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFS-WNRAMKPLAKTTS--SKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL 215 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~-~~~~~~~L~~~~G--~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~ 215 (489)
..+..+||+||+..+-.. -....+-... .| ...+.+-||-.|.--.-. ..+....++-.++..-|.
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d-~g~~~~pVvFSWPS~g~l~~Yn----------~DreS~~~Sr~aLe~~lr 182 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHD-SGNDGVPVVFSWPSRGSLLGYN----------YDRESTNYSRPALERLLR 182 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhh-cCCCcceEEEEcCCCCeeeecc----------cchhhhhhhHHHHHHHHH
Confidence 356789999999866543 1122222222 23 467788898766532100 011122334444444444
Q ss_pred HHHHHhcCceEEEEEeCcchHHHHHHhhh--------hhhHHHhHHhhcccc
Q 011291 216 YFIDILAAEKAILVGHSAGALVAVNSYFE--------APERVAALILIAPAI 259 (489)
Q Consensus 216 ~~l~~l~~~~v~liGhS~Gg~ial~~a~~--------~p~~v~~lvl~~~~~ 259 (489)
.+.+....++|+|++||||.++++....+ .+.+|+.+|+-+|-.
T Consensus 183 ~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 183 YLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred HHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 44444467899999999999999876543 234677778777654
No 183
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.53 E-value=0.001 Score=65.58 Aligned_cols=114 Identities=14% Similarity=0.068 Sum_probs=79.1
Q ss_pred CCCCCcEEEEccCCCCcc--chHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCC-CCCCCChHHHHHHH
Q 011291 138 KKIGFPMVLFHGFGASVF--SWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKK-PLNPYSMAFSVLAT 214 (489)
Q Consensus 138 ~~~~p~VlllHG~~~~~~--~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dl 214 (489)
.++.|.+|..+|.-+-+- .|+.--.-|.++ |+-....|.||-|.-... |-.++. .....+++|+...+
T Consensus 467 dg~~P~LLygYGay~isl~p~f~~srl~lld~-G~Vla~a~VRGGGe~G~~--------WHk~G~lakKqN~f~Dfia~A 537 (712)
T KOG2237|consen 467 DGSKPLLLYGYGAYGISLDPSFRASRLSLLDR-GWVLAYANVRGGGEYGEQ--------WHKDGRLAKKQNSFDDFIACA 537 (712)
T ss_pred cCCCceEEEEecccceeeccccccceeEEEec-ceEEEEEeeccCcccccc--------hhhccchhhhcccHHHHHHHH
Confidence 356787777777654332 244333344554 888888999997755421 111111 22345777887777
Q ss_pred HHHHHH--hcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 215 LYFIDI--LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 215 ~~~l~~--l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
..+++. ...++..+.|.|.||.++-.++-++|+.+.++|+--|...
T Consensus 538 eyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 538 EYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred HHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 777765 3567999999999999999999999999999998887653
No 184
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.52 E-value=0.0011 Score=58.25 Aligned_cols=99 Identities=20% Similarity=0.215 Sum_probs=68.5
Q ss_pred CcEEEEccCCCCccc--hHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 142 FPMVLFHGFGASVFS--WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 142 p~VlllHG~~~~~~~--~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
-|+|++||++.+... ...+.+.+.+..|..|+++|. |-| .. ......+.+.++.+.+.+.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~---------------~s~l~pl~~Qv~~~ce~v~ 85 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IK---------------DSSLMPLWEQVDVACEKVK 85 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cc---------------hhhhccHHHHHHHHHHHHh
Confidence 589999999988876 677778887766999999997 333 10 0122344455554444444
Q ss_pred Hhc--CceEEEEEeCcchHHHHHHhhhhhh-HHHhHHhhccc
Q 011291 220 ILA--AEKAILVGHSAGALVAVNSYFEAPE-RVAALILIAPA 258 (489)
Q Consensus 220 ~l~--~~~v~liGhS~Gg~ial~~a~~~p~-~v~~lvl~~~~ 258 (489)
... .+-++++|.|.||.++-.++..-++ .|+.+|.++++
T Consensus 86 ~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 86 QMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred cchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 221 2469999999999999888765433 48888888865
No 185
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.38 E-value=0.0029 Score=59.87 Aligned_cols=65 Identities=18% Similarity=0.182 Sum_probs=47.0
Q ss_pred CccEEEEecCCCCCCCchhHHHHHhhCC----CCEEEEe-----------cCCCCCCccccHHHHHHHHHHHHHHhhCCC
Q 011291 414 SCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVI-----------KNCGHVPQEEKVEEFVSIVARFLQRAFGYS 478 (489)
Q Consensus 414 ~~PvLii~G~~D~~vp~~~~~~l~~~~~----~~~~~~i-----------~g~gH~~~~e~p~~v~~~i~~fl~~~~~~~ 478 (489)
++-.+..|+..|..+|.+.-+.+.+.+. +++++.+ .+..|.+-...-..+.+.+-..|++..+.+
T Consensus 293 ~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~~~~ 372 (403)
T PF11144_consen 293 KIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQGRK 372 (403)
T ss_pred ceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhhccc
Confidence 3445788999999999887777776653 5777776 445787766666777777777777755433
No 186
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.35 E-value=0.012 Score=55.72 Aligned_cols=59 Identities=27% Similarity=0.411 Sum_probs=47.2
Q ss_pred CccEEEEecCCCCCCCchhHHHHHhhCC------------------------C-CEEEEecCCCCCCccccHHHHHHHHH
Q 011291 414 SCPVLIVTGDTDRIVPSWNAERLSRAIP------------------------G-STFEVIKNCGHVPQEEKVEEFVSIVA 468 (489)
Q Consensus 414 ~~PvLii~G~~D~~vp~~~~~~l~~~~~------------------------~-~~~~~i~g~gH~~~~e~p~~v~~~i~ 468 (489)
.++||+..|+.|.+|+....+.+.+.+. + .+++.+.++||+++ .+|+...+.|.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 5899999999999999776666655542 1 35666779999996 58999999999
Q ss_pred HHHHH
Q 011291 469 RFLQR 473 (489)
Q Consensus 469 ~fl~~ 473 (489)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99964
No 187
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.21 E-value=0.013 Score=52.32 Aligned_cols=106 Identities=10% Similarity=0.093 Sum_probs=74.0
Q ss_pred CCCCcEEEEccCCCCccc-hHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFS-WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~-~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
...|.||++-...|+... .+..++.|... ..|+.-|+-.--.-. ...+.++++|+++-+.++
T Consensus 101 ~pdPkvLivapmsGH~aTLLR~TV~alLp~--~~vyitDW~dAr~Vp---------------~~~G~FdldDYIdyvie~ 163 (415)
T COG4553 101 KPDPKVLIVAPMSGHYATLLRGTVEALLPY--HDVYITDWVDARMVP---------------LEAGHFDLDDYIDYVIEM 163 (415)
T ss_pred CCCCeEEEEecccccHHHHHHHHHHHhccc--cceeEeeccccceee---------------cccCCccHHHHHHHHHHH
Confidence 345678888777766544 45567777764 688998886433221 234778999999999999
Q ss_pred HHHhcCceEEEEEeCcchHHHHHHh-----hhhhhHHHhHHhhcccccCc
Q 011291 218 IDILAAEKAILVGHSAGALVAVNSY-----FEAPERVAALILIAPAILAP 262 (489)
Q Consensus 218 l~~l~~~~v~liGhS~Gg~ial~~a-----~~~p~~v~~lvl~~~~~~~~ 262 (489)
+..+|.+ +++++.+.=+.-.+... ...|..-..+++++++....
T Consensus 164 ~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 164 INFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred HHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 9999965 88888888775544332 23466677888888876543
No 188
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.18 E-value=0.0013 Score=64.02 Aligned_cols=82 Identities=20% Similarity=0.206 Sum_probs=56.8
Q ss_pred chHHhhHHhHhhCCCeE----E-E-eCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh---cCceE
Q 011291 156 SWNRAMKPLAKTTSSKV----L-A-FDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL---AAEKA 226 (489)
Q Consensus 156 ~~~~~~~~L~~~~G~~V----i-~-~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v 226 (489)
.|..+++.|.+. ||.. . + +|+|- +. ...++....+..+|+.. ..++|
T Consensus 66 ~~~~li~~L~~~-GY~~~~~l~~~pYDWR~---~~--------------------~~~~~~~~~lk~~ie~~~~~~~~kv 121 (389)
T PF02450_consen 66 YFAKLIENLEKL-GYDRGKDLFAAPYDWRL---SP--------------------AERDEYFTKLKQLIEEAYKKNGKKV 121 (389)
T ss_pred hHHHHHHHHHhc-CcccCCEEEEEeechhh---ch--------------------hhHHHHHHHHHHHHHHHHHhcCCcE
Confidence 789999999874 7752 2 2 67761 11 12334455555555443 35799
Q ss_pred EEEEeCcchHHHHHHhhhhh------hHHHhHHhhcccccC
Q 011291 227 ILVGHSAGALVAVNSYFEAP------ERVAALILIAPAILA 261 (489)
Q Consensus 227 ~liGhS~Gg~ial~~a~~~p------~~v~~lvl~~~~~~~ 261 (489)
+||||||||.++..+....+ +.|+++|.++++...
T Consensus 122 ~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 122 VLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred EEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 99999999999998877653 358999999987643
No 189
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.12 E-value=0.0014 Score=66.09 Aligned_cols=102 Identities=19% Similarity=0.173 Sum_probs=58.6
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHh--------h-------CCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCC
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAK--------T-------TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNP 204 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~--------~-------~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~ 204 (489)
.|-||+||+|..|+-..-+.++..-.. + ..|+-.++|+=+ +-.....
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE------------------e~tAm~G 149 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE------------------EFTAMHG 149 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc------------------hhhhhcc
Confidence 577999999999887666555433221 0 025556666532 0112233
Q ss_pred CChHHHHHHHHHHHHHh-----c--------CceEEEEEeCcchHHHHHHhhh---hhhHHHhHHhhcccc
Q 011291 205 YSMAFSVLATLYFIDIL-----A--------AEKAILVGHSAGALVAVNSYFE---APERVAALILIAPAI 259 (489)
Q Consensus 205 ~~~~~~~~dl~~~l~~l-----~--------~~~v~liGhS~Gg~ial~~a~~---~p~~v~~lvl~~~~~ 259 (489)
.++.+.++=+.+.++.+ + .+.|+|+||||||++|..++.. .++.|.-++.++++-
T Consensus 150 ~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 150 HILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 34444444444333322 1 2359999999999999865542 234566666666553
No 190
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.10 E-value=0.006 Score=57.48 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=80.1
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 219 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~ 219 (489)
+.|+|+..-|.+.+..-.+. +++.-.+-+-+.+++|-+|.|.+. +.++...++++.+.|.+.+++
T Consensus 62 drPtV~~T~GY~~~~~p~r~---Ept~Lld~NQl~vEhRfF~~SrP~------------p~DW~~Lti~QAA~D~Hri~~ 126 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRS---EPTQLLDGNQLSVEHRFFGPSRPE------------PADWSYLTIWQAASDQHRIVQ 126 (448)
T ss_pred CCCeEEEecCcccccCcccc---chhHhhccceEEEEEeeccCCCCC------------CCCcccccHhHhhHHHHHHHH
Confidence 46788888888765433322 333323458899999999999864 456788999999999999998
Q ss_pred Hhc---CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccc
Q 011291 220 ILA---AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 258 (489)
Q Consensus 220 ~l~---~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~ 258 (489)
.++ ..+.+--|.|=||+.++.+=.-||+.|++.|..-.+
T Consensus 127 A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 127 AFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred HHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 874 368999999999999997777789999998876554
No 191
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.09 E-value=0.0088 Score=57.68 Aligned_cols=113 Identities=19% Similarity=0.182 Sum_probs=85.3
Q ss_pred CCCcEEEEccCCCCccchHH----hhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNR----AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL 215 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~----~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~ 215 (489)
.+|..|||-|=+.-...|-. ....++++.|-.|+.+++|-+|.|.+..... -......+..+...|+.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~s--------t~nlk~LSs~QALaDla 156 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLS--------TSNLKYLSSLQALADLA 156 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCc--------ccchhhhhHHHHHHHHH
Confidence 56778888775544444522 2445666668999999999999996543321 22355678889999999
Q ss_pred HHHHHhcC-------ceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 216 YFIDILAA-------EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 216 ~~l~~l~~-------~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
.+|+++.. .+++.+|.|+-|.++.++=.++|+.+.+-|.-++++.
T Consensus 157 ~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 157 EFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 99988742 3899999999999999998999999988887777653
No 192
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.08 E-value=0.0082 Score=53.53 Aligned_cols=50 Identities=24% Similarity=0.410 Sum_probs=40.3
Q ss_pred HHHHHHHHHHH---hcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 210 SVLATLYFIDI---LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 210 ~~~dl~~~l~~---l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
+.+.+.-+|+. ++.++-.|+|||+||.+++.....+|+.+...++++|..
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 33445555554 245679999999999999999999999999999999875
No 193
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.06 E-value=0.0098 Score=57.68 Aligned_cols=109 Identities=10% Similarity=0.024 Sum_probs=70.5
Q ss_pred CCCCcEEEEccCCCCccchHHhhH-------------------HhHhhCCCeEEEeC-CCCCCCCCCCCCCCCCCCCcCC
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMK-------------------PLAKTTSSKVLAFD-RPAFGLTSRVFPFQQPTPDTEN 198 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~-------------------~L~~~~G~~Vi~~D-~~G~G~S~~~~~~~~~~~~~~~ 198 (489)
.+.|.++.+.|++|++..|..+.+ .+... -.++-+| .-|.|.|....
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~--adLvFiDqPvGTGfS~a~~----------- 165 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF--ADLVFIDQPVGTGFSRALG----------- 165 (498)
T ss_pred CCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC--CceEEEecCcccCcccccc-----------
Confidence 357889999999999887654421 11111 3689999 45899997421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHh-------c--CceEEEEEeCcchHHHHHHhhhhhhH---HHhHHhhcccccCc
Q 011291 199 KKPLNPYSMAFSVLATLYFIDIL-------A--AEKAILVGHSAGALVAVNSYFEAPER---VAALILIAPAILAP 262 (489)
Q Consensus 199 ~~~~~~~~~~~~~~dl~~~l~~l-------~--~~~v~liGhS~Gg~ial~~a~~~p~~---v~~lvl~~~~~~~~ 262 (489)
.....+.....+|+..+.+.+ . ..+.+|+|-|+||.-+..+|..--++ .++++++.+.....
T Consensus 166 --~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlign 239 (498)
T COG2939 166 --DEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGN 239 (498)
T ss_pred --cccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecC
Confidence 123334444445554444332 2 24899999999999999888765443 66777777665443
No 194
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.02 E-value=0.00089 Score=68.74 Aligned_cols=107 Identities=20% Similarity=0.118 Sum_probs=61.2
Q ss_pred CCCcEEEEccCCCC---cc-chHHhhHHhHhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCcCCCCC-CCCCChHHH
Q 011291 140 IGFPMVLFHGFGAS---VF-SWNRAMKPLAKTTSSKVLAFDRP----AFGLTSRVFPFQQPTPDTENKKP-LNPYSMAFS 210 (489)
Q Consensus 140 ~~p~VlllHG~~~~---~~-~~~~~~~~L~~~~G~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 210 (489)
+.|++|+|||++.. .. ....-...++.+ +.-||.+++| |+-.+... .. .+.+.+.|.
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~-~vivVt~nYRlg~~Gfl~~~~~-------------~~~~gN~Gl~Dq 189 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASK-DVIVVTINYRLGAFGFLSLGDL-------------DAPSGNYGLLDQ 189 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHH-TSEEEEE----HHHHH-BSSST-------------TSHBSTHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCC-CEEEEEeccccccccccccccc-------------ccCchhhhhhhh
Confidence 45889999998632 21 222233344554 8999999999 33322210 01 145566666
Q ss_pred HHHHHHHHHHh---c--CceEEEEEeCcchHHHHHHhhhh--hhHHHhHHhhccccc
Q 011291 211 VLATLYFIDIL---A--AEKAILVGHSAGALVAVNSYFEA--PERVAALILIAPAIL 260 (489)
Q Consensus 211 ~~dl~~~l~~l---~--~~~v~liGhS~Gg~ial~~a~~~--p~~v~~lvl~~~~~~ 260 (489)
...+.-+-+.+ | .++|.|+|||.||..+..+...- ...++++|+.++...
T Consensus 190 ~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 190 RLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred HHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 66554444444 3 46899999999999888666542 246899999988543
No 195
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.96 E-value=0.00071 Score=61.02 Aligned_cols=105 Identities=16% Similarity=0.096 Sum_probs=52.4
Q ss_pred CCCcEEEEccCCCCcc---chHHhhHHhHhh-CCCeEEEeCCCCCCCC-CCCCCCCCCCCCcCCCCCCCCCChHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVF---SWNRAMKPLAKT-TSSKVLAFDRPAFGLT-SRVFPFQQPTPDTENKKPLNPYSMAFSVLAT 214 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~---~~~~~~~~L~~~-~G~~Vi~~D~~G~G~S-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 214 (489)
...|||+.||++.+.. .+..+...+.+. .|..|..++.- -+.+ +.. ..--..+.+.++.+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~--------------~s~f~~v~~Qv~~v 68 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVE--------------NSFFGNVNDQVEQV 68 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHH--------------HHHHSHHHHHHHHH
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhh--------------hhHHHHHHHHHHHH
Confidence 3468999999997542 344443333332 27788888872 2211 100 00012334444445
Q ss_pred HHHHHHhc--CceEEEEEeCcchHHHHHHhhhhhh-HHHhHHhhcccc
Q 011291 215 LYFIDILA--AEKAILVGHSAGALVAVNSYFEAPE-RVAALILIAPAI 259 (489)
Q Consensus 215 ~~~l~~l~--~~~v~liGhS~Gg~ial~~a~~~p~-~v~~lvl~~~~~ 259 (489)
...+.... .+-+++||+|.||.++-.++.+.++ .|+.+|.++++-
T Consensus 69 c~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 69 CEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp HHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred HHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 55444421 1469999999999999999998764 699999998763
No 196
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.49 E-value=0.0093 Score=59.23 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=56.9
Q ss_pred chHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh----cCceEEEEEe
Q 011291 156 SWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL----AAEKAILVGH 231 (489)
Q Consensus 156 ~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~liGh 231 (489)
.|..+++.|... ||. -.|+.|..+--+... ......+++...+..+|+.. +.+||+|+||
T Consensus 157 vw~kLIe~L~~i-GY~--~~nL~gAPYDWRls~-------------~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~H 220 (642)
T PLN02517 157 VWAVLIANLARI-GYE--EKNMYMAAYDWRLSF-------------QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPH 220 (642)
T ss_pred eHHHHHHHHHHc-CCC--CCceeecccccccCc-------------cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 568999999985 987 455554433322110 01112234444555555543 4589999999
Q ss_pred CcchHHHHHHhhh---------------hhhHHHhHHhhcccccC
Q 011291 232 SAGALVAVNSYFE---------------APERVAALILIAPAILA 261 (489)
Q Consensus 232 S~Gg~ial~~a~~---------------~p~~v~~lvl~~~~~~~ 261 (489)
||||.+++.+... ..+.|++.|.++++...
T Consensus 221 SMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 221 SMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred CCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 9999999976542 12368899999887544
No 197
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.39 E-value=0.0054 Score=47.50 Aligned_cols=46 Identities=17% Similarity=0.450 Sum_probs=28.9
Q ss_pred CCCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccchHHhh
Q 011291 97 DPDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAM 161 (489)
Q Consensus 97 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~~~~~ 161 (489)
....-.++++|..||+....+. ..+..||||+||++++-..|..++
T Consensus 67 ~~phf~t~I~g~~iHFih~rs~-------------------~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 67 SFPHFKTEIDGLDIHFIHVRSK-------------------RPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TS-EEEEEETTEEEEEEEE--S--------------------TT-EEEEEE--SS--GGGGHHHH
T ss_pred cCCCeeEEEeeEEEEEEEeeCC-------------------CCCCeEEEEECCCCccHHhHHhhC
Confidence 3445556789999999988765 235679999999999988876653
No 198
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.19 E-value=0.0089 Score=57.35 Aligned_cols=84 Identities=14% Similarity=0.192 Sum_probs=56.6
Q ss_pred cchHHhhHHhHhhCCCe------EEEeCCCC-CCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH----HhcC
Q 011291 155 FSWNRAMKPLAKTTSSK------VLAFDRPA-FGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID----ILAA 223 (489)
Q Consensus 155 ~~~~~~~~~L~~~~G~~------Vi~~D~~G-~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~----~l~~ 223 (489)
..|..+++.|..- ||. -..+|+|= +-.+ ...++....+...++ .-+.
T Consensus 124 ~~w~~~i~~lv~~-GYe~~~~l~ga~YDwRls~~~~---------------------e~rd~yl~kLK~~iE~~~~~~G~ 181 (473)
T KOG2369|consen 124 WYWHELIENLVGI-GYERGKTLFGAPYDWRLSYHNS---------------------EERDQYLSKLKKKIETMYKLNGG 181 (473)
T ss_pred HHHHHHHHHHHhh-CcccCceeeccccchhhccCCh---------------------hHHHHHHHHHHHHHHHHHHHcCC
Confidence 3678888888885 887 34577772 1111 123334444444443 3466
Q ss_pred ceEEEEEeCcchHHHHHHhhhhhh--------HHHhHHhhccccc
Q 011291 224 EKAILVGHSAGALVAVNSYFEAPE--------RVAALILIAPAIL 260 (489)
Q Consensus 224 ~~v~liGhS~Gg~ial~~a~~~p~--------~v~~lvl~~~~~~ 260 (489)
+|++||+||||+.+.+.+...+++ .|++.+-++++..
T Consensus 182 kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 182 KKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred CceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhc
Confidence 999999999999999988876654 5888888887654
No 199
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.10 E-value=0.02 Score=48.68 Aligned_cols=105 Identities=21% Similarity=0.182 Sum_probs=61.4
Q ss_pred CCcEEEEccCCCCc-cchHH---------------hhHHhHhhCCCeEEEeCCCC---CCCCCCCCCCCCCCCCcCCCCC
Q 011291 141 GFPMVLFHGFGASV-FSWNR---------------AMKPLAKTTSSKVLAFDRPA---FGLTSRVFPFQQPTPDTENKKP 201 (489)
Q Consensus 141 ~p~VlllHG~~~~~-~~~~~---------------~~~~L~~~~G~~Vi~~D~~G---~G~S~~~~~~~~~~~~~~~~~~ 201 (489)
...+|+|||.|--. ..|.. .+.+-.+. ||.|+..+.-- +-.+.+.+ .
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~-Gygviv~N~N~~~kfye~k~np-------------~ 166 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAE-GYGVIVLNPNRERKFYEKKRNP-------------Q 166 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHc-CCcEEEeCCchhhhhhhcccCc-------------c
Confidence 45799999987432 34432 23333343 99999987531 11111100 1
Q ss_pred CCCCChHHHHH-HHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhh--HHHhHHhhcccc
Q 011291 202 LNPYSMAFSVL-ATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPE--RVAALILIAPAI 259 (489)
Q Consensus 202 ~~~~~~~~~~~-dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~--~v~~lvl~~~~~ 259 (489)
....+..+.+. -...++.....+.+.++.||+||...+.+..++|+ +|.++++-+.+.
T Consensus 167 kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 167 KYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred hhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 11112222222 22233444466899999999999999999998875 566677766653
No 200
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.06 E-value=0.0059 Score=50.93 Aligned_cols=50 Identities=18% Similarity=0.171 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHh----cCceEEEEEeCcchHHHHHHhhhhhh----HHHhHHhhcccc
Q 011291 210 SVLATLYFIDIL----AAEKAILVGHSAGALVAVNSYFEAPE----RVAALILIAPAI 259 (489)
Q Consensus 210 ~~~dl~~~l~~l----~~~~v~liGhS~Gg~ial~~a~~~p~----~v~~lvl~~~~~ 259 (489)
+...+...++.. ...+++++|||+||.+|..++..... .+..++.++++.
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 334444444443 56799999999999999988877654 355566666554
No 201
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.99 E-value=0.013 Score=47.87 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhhhh
Q 011291 209 FSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAP 246 (489)
Q Consensus 209 ~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p 246 (489)
...+.+..+++.....++++.|||+||.+|..++....
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 34445555555555578999999999999998887643
No 202
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.73 E-value=0.07 Score=54.90 Aligned_cols=109 Identities=20% Similarity=0.154 Sum_probs=66.2
Q ss_pred CCcEEEEccCCCCccc---hHH-hhHHhHhhCCCeEEEeCCC----CCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHH
Q 011291 141 GFPMVLFHGFGASVFS---WNR-AMKPLAKTTSSKVLAFDRP----AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVL 212 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~---~~~-~~~~L~~~~G~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (489)
-|++|++||++-.... +.. ....+......-|+.+.+| |+..... ....+.+.+.|.+.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d-------------~~~~gN~gl~Dq~~ 178 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGD-------------SAAPGNLGLFDQLL 178 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCC-------------CCCCCcccHHHHHH
Confidence 5889999998743222 211 1222222224667788877 2222211 11235566666666
Q ss_pred HHHHHHHH---hc--CceEEEEEeCcchHHHHHHhhh--hhhHHHhHHhhcccccCc
Q 011291 213 ATLYFIDI---LA--AEKAILVGHSAGALVAVNSYFE--APERVAALILIAPAILAP 262 (489)
Q Consensus 213 dl~~~l~~---l~--~~~v~liGhS~Gg~ial~~a~~--~p~~v~~lvl~~~~~~~~ 262 (489)
.+.-+-++ .+ .++|.|+|||.||..+..+... ....+.++|.+++....+
T Consensus 179 AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~~ 235 (545)
T KOG1516|consen 179 ALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALSP 235 (545)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccccc
Confidence 65544444 33 5689999999999998866653 235788999998876555
No 203
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.62 E-value=0.071 Score=49.37 Aligned_cols=62 Identities=19% Similarity=0.242 Sum_probs=47.8
Q ss_pred ccCCccEEEEecCCCCCCCchhHHHHHhhCCCC-EEEEecCCCCCCccccHHHHHHHHHHHHHHhh
Q 011291 411 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGS-TFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 475 (489)
Q Consensus 411 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~-~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~~ 475 (489)
.++..|-.++.+..|.+.++..+.-....+|+. .+..+|+..|.... ..+.+.+..|+....
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n---~~i~esl~~flnrfq 388 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN---QFIKESLEPFLNRFQ 388 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH---HHHHHHHHHHHHHHh
Confidence 566899999999999999999999999999986 57778999997643 344455666665543
No 204
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.52 E-value=0.74 Score=42.13 Aligned_cols=97 Identities=11% Similarity=0.061 Sum_probs=66.5
Q ss_pred CCCcEEEEccCCCCccc----hHHhhH----------HhHhhCCCeEEEeCCC-CCCCCCCCCCCCCCCCCcCCCCCCCC
Q 011291 140 IGFPMVLFHGFGASVFS----WNRAMK----------PLAKTTSSKVLAFDRP-AFGLTSRVFPFQQPTPDTENKKPLNP 204 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~----~~~~~~----------~L~~~~G~~Vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~ 204 (489)
..|..+.+.|.++.+.. |..+-+ .+.+. ..++.+|-| |.|.|--. ......
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVd------------g~~~Y~ 95 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVD------------GSSAYT 95 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeec------------Cccccc
Confidence 46778999999876643 332211 12222 478888877 78877531 233455
Q ss_pred CChHHHHHHHHHHHHHh-------cCceEEEEEeCcchHHHHHHhhhhhhHHH
Q 011291 205 YSMAFSVLATLYFIDIL-------AAEKAILVGHSAGALVAVNSYFEAPERVA 250 (489)
Q Consensus 205 ~~~~~~~~dl~~~l~~l-------~~~~v~liGhS~Gg~ial~~a~~~p~~v~ 250 (489)
.+..+.+.|+..+++.+ .-.+++|+.-|+||-++..++...-+.|+
T Consensus 96 ~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk 148 (414)
T KOG1283|consen 96 TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIK 148 (414)
T ss_pred ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHh
Confidence 67888999999999875 23489999999999999988876544443
No 205
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.42 E-value=0.082 Score=43.41 Aligned_cols=43 Identities=26% Similarity=0.326 Sum_probs=35.6
Q ss_pred HHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccc
Q 011291 217 FIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 259 (489)
Q Consensus 217 ~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~ 259 (489)
+++..-..+..+-|.||||+.|..+..++|+.+.++|.+++..
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 3344334567778999999999999999999999999999865
No 206
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.23 E-value=0.088 Score=47.86 Aligned_cols=37 Identities=24% Similarity=0.434 Sum_probs=33.3
Q ss_pred ceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 224 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 224 ~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
+.-+|+|-|+||.+++..+..+|++|-.++..+|...
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 4578999999999999999999999999999998753
No 207
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=94.75 E-value=0.032 Score=38.09 Aligned_cols=47 Identities=19% Similarity=0.233 Sum_probs=25.8
Q ss_pred CCCceeeecceEEEEEeccCccccccccccccCCCCCCCcCCCCCcEEEEccCCCCccch
Q 011291 98 PDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSW 157 (489)
Q Consensus 98 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VlllHG~~~~~~~~ 157 (489)
.+....+.||.-|......+.+. .......+|+|+|.||+.+++..|
T Consensus 13 E~h~V~T~DGYiL~l~RIp~~~~-------------~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 13 EEHEVTTEDGYILTLHRIPPGKN-------------SSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEEEEE-TTSEEEEEEEE-SBTT-------------CTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEEEEeCCCcEEEEEEccCCCC-------------CcccCCCCCcEEEECCcccChHHH
Confidence 34455567999888777655420 111235678999999999999888
No 208
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=94.69 E-value=0.034 Score=49.34 Aligned_cols=48 Identities=15% Similarity=0.151 Sum_probs=34.6
Q ss_pred HHHHHHHhcCceEEEEEeCcchHHHHHHhhhh----hhHHHhHHhhcccccCc
Q 011291 214 TLYFIDILAAEKAILVGHSAGALVAVNSYFEA----PERVAALILIAPAILAP 262 (489)
Q Consensus 214 l~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~----p~~v~~lvl~~~~~~~~ 262 (489)
+..+++..+ +++.+.|||.||.+|...+... .++|..++..++++...
T Consensus 75 l~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 75 LKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred HHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 334444444 4599999999999999777653 35788888888877654
No 209
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.39 E-value=0.24 Score=43.91 Aligned_cols=77 Identities=18% Similarity=0.088 Sum_probs=48.2
Q ss_pred cchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHH----HHHHHh----cC---
Q 011291 155 FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL----YFIDIL----AA--- 223 (489)
Q Consensus 155 ~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~----~~l~~l----~~--- 223 (489)
-.|+.+++.|+++ ||.|++.=+. ..++....+..+. ..++.+ +.
T Consensus 34 itYr~lLe~La~~-Gy~ViAtPy~------------------------~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 34 ITYRYLLERLADR-GYAVIATPYV------------------------VTFDHQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred HHHHHHHHHHHhC-CcEEEEEecC------------------------CCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4488999999996 9999987653 1123333333322 222222 11
Q ss_pred -ceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhc
Q 011291 224 -EKAILVGHSAGALVAVNSYFEAPERVAALILIA 256 (489)
Q Consensus 224 -~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~ 256 (489)
-+++-+|||+|+-+-+.+...++..-++-|+++
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 267889999999998877766654345555554
No 210
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.29 E-value=0.087 Score=44.60 Aligned_cols=61 Identities=18% Similarity=0.249 Sum_probs=47.5
Q ss_pred CccEEEEecCCCCCCCchhHHHHHhhCCC-----CEEEEecCCCCCCcccc---HHHHHHHHHHHHHHh
Q 011291 414 SCPVLIVTGDTDRIVPSWNAERLSRAIPG-----STFEVIKNCGHVPQEEK---VEEFVSIVARFLQRA 474 (489)
Q Consensus 414 ~~PvLii~G~~D~~vp~~~~~~l~~~~~~-----~~~~~i~g~gH~~~~e~---p~~v~~~i~~fl~~~ 474 (489)
++++|-|-|++|.++.+.+.....+.+.+ ...++.+|+||+....- .+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 47788899999999998876666665543 36778899999876654 378899999998763
No 211
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.92 E-value=0.055 Score=48.60 Aligned_cols=25 Identities=28% Similarity=0.315 Sum_probs=20.7
Q ss_pred cCceEEEEEeCcchHHHHHHhhhhh
Q 011291 222 AAEKAILVGHSAGALVAVNSYFEAP 246 (489)
Q Consensus 222 ~~~~v~liGhS~Gg~ial~~a~~~p 246 (489)
...++++.|||+||.+|..++....
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHH
Confidence 3568999999999999998877543
No 212
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.88 E-value=1.6 Score=41.33 Aligned_cols=65 Identities=15% Similarity=0.200 Sum_probs=51.5
Q ss_pred CccEEEEecCCCCCCCchhHHHHHhhCC----CCEEEEecCCCCCCccc-cHHHHHHHHHHHHHHhhCCC
Q 011291 414 SCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQEE-KVEEFVSIVARFLQRAFGYS 478 (489)
Q Consensus 414 ~~PvLii~G~~D~~vp~~~~~~l~~~~~----~~~~~~i~g~gH~~~~e-~p~~v~~~i~~fl~~~~~~~ 478 (489)
..+.+.+++..|.++|....+.+.+... +++.+-+.++-|..+.. .|..+.++..+|++......
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccccc
Confidence 5678899999999999988777755442 45666678889988764 79999999999999876543
No 213
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.78 E-value=0.11 Score=44.99 Aligned_cols=69 Identities=19% Similarity=0.123 Sum_probs=43.8
Q ss_pred CeEEEeCCCCCCCCCCC-CCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhc-CceEEEEEeCcchHHHHHHhhhh
Q 011291 170 SKVLAFDRPAFGLTSRV-FPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA-AEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 170 ~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
.+|++|=+|-....... ... .+.......-..|..+....+|++.+ .++++|+|||.|+.+...+...+
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~-------~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDR-------EDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CccccChhhcchhhhhhccCc-------chhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 67888888753222211 000 01112233456666677777888874 45899999999999999988764
No 214
>PLN02571 triacylglycerol lipase
Probab=93.51 E-value=0.092 Score=50.50 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhcCc--eEEEEEeCcchHHHHHHhhh
Q 011291 208 AFSVLATLYFIDILAAE--KAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 208 ~~~~~dl~~~l~~l~~~--~v~liGhS~Gg~ial~~a~~ 244 (489)
+++..++..+++....+ ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45556677777766443 68999999999999987764
No 215
>PLN02454 triacylglycerol lipase
Probab=93.35 E-value=0.11 Score=50.02 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=22.6
Q ss_pred HHHHHHHHhcCc--eEEEEEeCcchHHHHHHhhh
Q 011291 213 ATLYFIDILAAE--KAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 213 dl~~~l~~l~~~--~v~liGhS~Gg~ial~~a~~ 244 (489)
.|..+++..... +|++.|||+||.+|+..|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344444444333 49999999999999988754
No 216
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=93.27 E-value=0.093 Score=44.45 Aligned_cols=55 Identities=22% Similarity=0.224 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHhc-----CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccC
Q 011291 207 MAFSVLATLYFIDILA-----AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILA 261 (489)
Q Consensus 207 ~~~~~~dl~~~l~~l~-----~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~ 261 (489)
-+.-+.++..|++.|. ..++.++|||+|+.++-..+...+..++.+|++++++..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 4455566777776653 347999999999999987766656689999999877653
No 217
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.27 E-value=0.22 Score=40.40 Aligned_cols=78 Identities=21% Similarity=0.266 Sum_probs=50.3
Q ss_pred cEEEEccCCCCccchHHhhHHhHhhCCCe-EEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh
Q 011291 143 PMVLFHGFGASVFSWNRAMKPLAKTTSSK-VLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 221 (489)
Q Consensus 143 ~VlllHG~~~~~~~~~~~~~~L~~~~G~~-Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l 221 (489)
.||+.-|++..+..+..++- .+ .+. ++++|+...-.. +++. +
T Consensus 13 LIvyFaGwgtpps~v~HLil---pe-N~dl~lcYDY~dl~ld---------------------fDfs-------A----- 55 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLIL---PE-NHDLLLCYDYQDLNLD---------------------FDFS-------A----- 55 (214)
T ss_pred EEEEEecCCCCHHHHhhccC---CC-CCcEEEEeehhhcCcc---------------------cchh-------h-----
Confidence 78888899888766554432 22 454 567888632211 1111 1
Q ss_pred cCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhccccc
Q 011291 222 AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 260 (489)
Q Consensus 222 ~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~ 260 (489)
.+.+.+|.+|||-.+|-++....+ ++..+.+++...
T Consensus 56 -y~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 56 -YRHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred -hhhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCCC
Confidence 256789999999999988876654 677777776543
No 218
>PLN00413 triacylglycerol lipase
Probab=92.44 E-value=0.18 Score=49.08 Aligned_cols=36 Identities=25% Similarity=0.133 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhh
Q 011291 208 AFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYF 243 (489)
Q Consensus 208 ~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~ 243 (489)
.++.+.+..+++.....++++.|||+||.+|..+|.
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 355566777777777778999999999999997764
No 219
>PLN02162 triacylglycerol lipase
Probab=92.44 E-value=0.17 Score=49.20 Aligned_cols=37 Identities=22% Similarity=-0.043 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhh
Q 011291 207 MAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYF 243 (489)
Q Consensus 207 ~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~ 243 (489)
..++.+.+..++......++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3445555666666666678999999999999997654
No 220
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.39 E-value=0.32 Score=48.66 Aligned_cols=67 Identities=9% Similarity=0.189 Sum_probs=48.3
Q ss_pred cccCCccEEEEecCCCCCCCchhHHHHHhhC----CC--------CEEEEecCCCCCCccc--cHHHHHHHHHHHHHHhh
Q 011291 410 LHEISCPVLIVTGDTDRIVPSWNAERLSRAI----PG--------STFEVIKNCGHVPQEE--KVEEFVSIVARFLQRAF 475 (489)
Q Consensus 410 l~~i~~PvLii~G~~D~~vp~~~~~~l~~~~----~~--------~~~~~i~g~gH~~~~e--~p~~v~~~i~~fl~~~~ 475 (489)
+.+-.-.+|+.||..|.++|+.....+++++ .. .++..+||.+|+.--. .+-.....|.+|+++-.
T Consensus 349 F~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~ 428 (474)
T PF07519_consen 349 FRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGK 428 (474)
T ss_pred HHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCC
Confidence 3344678999999999999987655554433 21 3788899999976443 34567889999998644
Q ss_pred C
Q 011291 476 G 476 (489)
Q Consensus 476 ~ 476 (489)
+
T Consensus 429 A 429 (474)
T PF07519_consen 429 A 429 (474)
T ss_pred C
Confidence 3
No 221
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=92.31 E-value=0.15 Score=43.67 Aligned_cols=41 Identities=27% Similarity=0.381 Sum_probs=30.8
Q ss_pred HHhcCceEEEEEeCcchHHHHHHhhh------hhhHHHhHHhhcccc
Q 011291 219 DILAAEKAILVGHSAGALVAVNSYFE------APERVAALILIAPAI 259 (489)
Q Consensus 219 ~~l~~~~v~liGhS~Gg~ial~~a~~------~p~~v~~lvl~~~~~ 259 (489)
..-...+++|+|+|.|+.++..++.. ..++|.++++++-+.
T Consensus 76 ~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 76 ARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp HHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred HhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 33345699999999999999988765 345777888887654
No 222
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.21 E-value=0.19 Score=47.68 Aligned_cols=86 Identities=19% Similarity=0.064 Sum_probs=46.7
Q ss_pred CCCcEEEEccCCC-CccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGA-SVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 140 ~~p~VlllHG~~~-~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
.+..|||.||+-+ +...|...+...... +.=..+..+|+-....... ++...-.. .+++++...+
T Consensus 79 ~~HLvVlthGi~~~~~~~~~~~~~~~~kk--~p~~~iv~~g~~~~~~~T~---------~Gv~~lG~---Rla~~~~e~~ 144 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWKEKIEQMTKK--MPDKLIVVRGKMNNMCQTF---------DGVDVLGE---RLAEEVKETL 144 (405)
T ss_pred CceEEEeccccccccHHHHHHHHHhhhcC--CCcceEeeeccccchhhcc---------ccceeeec---ccHHHHhhhh
Confidence 4567999999987 556676666665553 2222333333222111100 01111111 2233334444
Q ss_pred HHhcCceEEEEEeCcchHHHH
Q 011291 219 DILAAEKAILVGHSAGALVAV 239 (489)
Q Consensus 219 ~~l~~~~v~liGhS~Gg~ial 239 (489)
....++++-.+|||.||.++.
T Consensus 145 ~~~si~kISfvghSLGGLvar 165 (405)
T KOG4372|consen 145 YDYSIEKISFVGHSLGGLVAR 165 (405)
T ss_pred hccccceeeeeeeecCCeeee
Confidence 444578999999999999876
No 223
>PLN02408 phospholipase A1
Probab=92.19 E-value=0.19 Score=47.73 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhcCc--eEEEEEeCcchHHHHHHhhhh
Q 011291 210 SVLATLYFIDILAAE--KAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 210 ~~~dl~~~l~~l~~~--~v~liGhS~Gg~ial~~a~~~ 245 (489)
+.+.|..+++....+ ++++.|||+||.+|...|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 345566666665433 599999999999999877654
No 224
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=92.02 E-value=3.5 Score=44.87 Aligned_cols=95 Identities=21% Similarity=0.201 Sum_probs=59.0
Q ss_pred CCCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 139 KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
.+.|+++|+|..-+....+ +.|+.+ . ..|.||.-.. ......++++.+.-...-+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l----~~la~r--l-----e~PaYglQ~T--------------~~vP~dSies~A~~yirqi 2175 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTAL----ESLASR--L-----EIPAYGLQCT--------------EAVPLDSIESLAAYYIRQI 2175 (2376)
T ss_pred ccCCceEEEeccccchHHH----HHHHhh--c-----CCcchhhhcc--------------ccCCcchHHHHHHHHHHHH
Confidence 3578999999887765544 444443 1 2233443211 1223346666665444445
Q ss_pred HHhcC-ceEEEEEeCcchHHHHHHhhhhh--hHHHhHHhhccc
Q 011291 219 DILAA-EKAILVGHSAGALVAVNSYFEAP--ERVAALILIAPA 258 (489)
Q Consensus 219 ~~l~~-~~v~liGhS~Gg~ial~~a~~~p--~~v~~lvl~~~~ 258 (489)
+.+.. .+..++|+|+|+.++..+|.... +-...+|++++.
T Consensus 2176 rkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2176 RKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred HhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 55543 48999999999999999986543 235568888775
No 225
>PLN02934 triacylglycerol lipase
Probab=91.70 E-value=0.24 Score=48.69 Aligned_cols=36 Identities=17% Similarity=0.060 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhh
Q 011291 208 AFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYF 243 (489)
Q Consensus 208 ~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~ 243 (489)
......+..+++.....++++.|||+||.+|..++.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345556667777766679999999999999997764
No 226
>PLN02324 triacylglycerol lipase
Probab=90.83 E-value=0.3 Score=46.99 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhcC--ceEEEEEeCcchHHHHHHhhh
Q 011291 210 SVLATLYFIDILAA--EKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 210 ~~~dl~~~l~~l~~--~~v~liGhS~Gg~ial~~a~~ 244 (489)
+...|..+++.... -+|.+.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 33445666665543 269999999999999977754
No 227
>PLN02802 triacylglycerol lipase
Probab=90.61 E-value=0.33 Score=47.74 Aligned_cols=36 Identities=22% Similarity=0.150 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcC--ceEEEEEeCcchHHHHHHhhhh
Q 011291 210 SVLATLYFIDILAA--EKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 210 ~~~dl~~~l~~l~~--~~v~liGhS~Gg~ial~~a~~~ 245 (489)
+.+.+..+++.... .+|++.|||+||.+|...|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 34455566665543 2689999999999999777543
No 228
>PLN02310 triacylglycerol lipase
Probab=90.47 E-value=0.35 Score=46.50 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhc----CceEEEEEeCcchHHHHHHhhh
Q 011291 208 AFSVLATLYFIDILA----AEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 208 ~~~~~dl~~~l~~l~----~~~v~liGhS~Gg~ial~~a~~ 244 (489)
+++.+.|..+++.+. .-++.+.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344555666666552 2379999999999999977743
No 229
>PLN02753 triacylglycerol lipase
Probab=90.11 E-value=0.39 Score=47.48 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhcC-----ceEEEEEeCcchHHHHHHhhh
Q 011291 210 SVLATLYFIDILAA-----EKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 210 ~~~dl~~~l~~l~~-----~~v~liGhS~Gg~ial~~a~~ 244 (489)
+...|..+++.... -+|.+.|||+||.+|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34445556655432 489999999999999987754
No 230
>PLN03037 lipase class 3 family protein; Provisional
Probab=89.46 E-value=0.45 Score=46.96 Aligned_cols=36 Identities=17% Similarity=0.282 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhc----CceEEEEEeCcchHHHHHHhhh
Q 011291 209 FSVLATLYFIDILA----AEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 209 ~~~~dl~~~l~~l~----~~~v~liGhS~Gg~ial~~a~~ 244 (489)
+..++|..+++.+. ..++.|.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44566677776653 2369999999999999987754
No 231
>PLN02719 triacylglycerol lipase
Probab=89.34 E-value=0.48 Score=46.72 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhcC-----ceEEEEEeCcchHHHHHHhhh
Q 011291 210 SVLATLYFIDILAA-----EKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 210 ~~~dl~~~l~~l~~-----~~v~liGhS~Gg~ial~~a~~ 244 (489)
+...|..+++.... .+|.+.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 33445555555432 379999999999999987754
No 232
>PLN02761 lipase class 3 family protein
Probab=89.17 E-value=0.49 Score=46.73 Aligned_cols=36 Identities=19% Similarity=0.285 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhc------CceEEEEEeCcchHHHHHHhhh
Q 011291 209 FSVLATLYFIDILA------AEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 209 ~~~~dl~~~l~~l~------~~~v~liGhS~Gg~ial~~a~~ 244 (489)
++...|..+++... .-+|.+.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34445556666552 1379999999999999977753
No 233
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=87.39 E-value=0.96 Score=42.81 Aligned_cols=39 Identities=33% Similarity=0.490 Sum_probs=30.5
Q ss_pred cCceEEEEEeCcchHHHHHHhhhhhhH-----HHhHHhhccccc
Q 011291 222 AAEKAILVGHSAGALVAVNSYFEAPER-----VAALILIAPAIL 260 (489)
Q Consensus 222 ~~~~v~liGhS~Gg~ial~~a~~~p~~-----v~~lvl~~~~~~ 260 (489)
+.++|.|||||+|+.+...+.....++ |..+++++++..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 566899999999999988776654443 778888887654
No 234
>PLN02847 triacylglycerol lipase
Probab=85.45 E-value=1.2 Score=44.84 Aligned_cols=23 Identities=30% Similarity=0.245 Sum_probs=19.0
Q ss_pred cCceEEEEEeCcchHHHHHHhhh
Q 011291 222 AAEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 222 ~~~~v~liGhS~Gg~ial~~a~~ 244 (489)
..-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 33489999999999999987654
No 235
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=85.45 E-value=1.1 Score=42.70 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHhcCceEEEEEeCcchHHHHHHhhh
Q 011291 208 AFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 208 ~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ial~~a~~ 244 (489)
..+.+++..+++....-++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4666777788888887799999999999999977754
No 236
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=84.71 E-value=3 Score=41.58 Aligned_cols=86 Identities=21% Similarity=0.261 Sum_probs=52.6
Q ss_pred CCcEEEEccCCC---CccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Q 011291 141 GFPMVLFHGFGA---SVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 217 (489)
Q Consensus 141 ~p~VlllHG~~~---~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~ 217 (489)
+-.|+-+||+|. ++..-...+..++...|..|+.+|+-=--+.. -..-+++..-...-+
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaP------------------FPRaleEv~fAYcW~ 457 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAP------------------FPRALEEVFFAYCWA 457 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCC------------------CCcHHHHHHHHHHHH
Confidence 446888999884 33334455677777779999999973221111 122233333333333
Q ss_pred HH---Hhc--CceEEEEEeCcchHHHHHHhhh
Q 011291 218 ID---ILA--AEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 218 l~---~l~--~~~v~liGhS~Gg~ial~~a~~ 244 (489)
|+ .+| .++|+++|-|.||.+.+..+.+
T Consensus 458 inn~allG~TgEriv~aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 458 INNCALLGSTGERIVLAGDSAGGNLCFTVALR 489 (880)
T ss_pred hcCHHHhCcccceEEEeccCCCcceeehhHHH
Confidence 33 233 3799999999999876655543
No 237
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=81.91 E-value=4.5 Score=35.98 Aligned_cols=41 Identities=29% Similarity=0.207 Sum_probs=27.3
Q ss_pred CChHHHHHHHHHHHHH-h-cCceEEEEEeCcchHHHHHHhhhh
Q 011291 205 YSMAFSVLATLYFIDI-L-AAEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 205 ~~~~~~~~dl~~~l~~-l-~~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
.+..+=++.+.+.++. . ..++++++|+|+|+.++...+.+.
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 3444444445554444 1 337899999999999998776654
No 238
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=75.15 E-value=6.1 Score=37.48 Aligned_cols=85 Identities=22% Similarity=0.289 Sum_probs=58.9
Q ss_pred CcEEEEccCCCCc-------cchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHH
Q 011291 142 FPMVLFHGFGASV-------FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLAT 214 (489)
Q Consensus 142 p~VlllHG~~~~~-------~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 214 (489)
-.||++||.+.+. +.|..+++.+.++ | .+-.+|.-..|..+ .+++.+..+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-~-lip~~D~AYQGF~~---------------------GleeDa~~l 228 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-G-LIPFFDIAYQGFAD---------------------GLEEDAYAL 228 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-C-Ceeeeehhhhhhcc---------------------chHHHHHHH
Confidence 3599999987654 5698888888876 3 45567777666654 255666666
Q ss_pred HHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcc
Q 011291 215 LYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 257 (489)
Q Consensus 215 ~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~ 257 (489)
..++.... -.++..|+.=.+++ |.+||-++++++.
T Consensus 229 R~~a~~~~---~~lva~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 229 RLFAEVGP---ELLVASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred HHHHHhCC---cEEEEehhhhhhhh-----hhhccceeEEEeC
Confidence 66655532 28888888777766 6678887777754
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=72.70 E-value=5.3 Score=40.08 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=35.3
Q ss_pred CceEEEEEeCcchHHHHHHhhhhhhHHHhHHhhcccccC
Q 011291 223 AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILA 261 (489)
Q Consensus 223 ~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl~~~~~~~ 261 (489)
.++-+..|.|-||.-++..|++||+.+++|+.-+|+...
T Consensus 114 p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 114 PKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred CCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 457899999999999999999999999999999988643
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=71.53 E-value=6.2 Score=35.66 Aligned_cols=25 Identities=24% Similarity=0.243 Sum_probs=20.8
Q ss_pred hcCceEEEEEeCcchHHHHHHhhhh
Q 011291 221 LAAEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 221 l~~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
....++.+-|||+||.+|..+..++
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCCceEEEeccccchHHHHHhcccc
Confidence 3446899999999999999887765
No 241
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=71.53 E-value=6.2 Score=35.66 Aligned_cols=25 Identities=24% Similarity=0.243 Sum_probs=20.8
Q ss_pred hcCceEEEEEeCcchHHHHHHhhhh
Q 011291 221 LAAEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 221 l~~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
....++.+-|||+||.+|..+..++
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCCceEEEeccccchHHHHHhcccc
Confidence 3446899999999999999887765
No 242
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.31 E-value=7.8 Score=38.99 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=23.3
Q ss_pred ChHHHHHHHHHHHHHh--c-CceEEEEEeCcchHHHHHHhh
Q 011291 206 SMAFSVLATLYFIDIL--A-AEKAILVGHSAGALVAVNSYF 243 (489)
Q Consensus 206 ~~~~~~~dl~~~l~~l--~-~~~v~liGhS~Gg~ial~~a~ 243 (489)
++..-...+...+.+. | ..+++.|||||||.++-.+..
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHH
Confidence 3333344444444443 3 357999999999987765543
No 243
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=61.70 E-value=26 Score=26.52 Aligned_cols=85 Identities=11% Similarity=0.075 Sum_probs=51.9
Q ss_pred cchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcc
Q 011291 155 FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAG 234 (489)
Q Consensus 155 ~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~G 234 (489)
+.....+..+.+..||-.=.+.++.+|.+-... ......+.-...|..+++.+...++++||-|--
T Consensus 10 wnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~--------------~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq 75 (100)
T PF09949_consen 10 WNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGL--------------FKSGAEEHKRDNIERILRDFPERKFILIGDSGQ 75 (100)
T ss_pred HHHHHHHHHHHHhcCCCCCceEcccCCcccccc--------------ccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCC
Confidence 333344444433347877777777776553211 011111345566788888888899999999865
Q ss_pred hH--HHHHHhhhhhhHHHhHH
Q 011291 235 AL--VAVNSYFEAPERVAALI 253 (489)
Q Consensus 235 g~--ial~~a~~~p~~v~~lv 253 (489)
.= +-..+|.++|++|.++.
T Consensus 76 ~DpeiY~~ia~~~P~~i~ai~ 96 (100)
T PF09949_consen 76 HDPEIYAEIARRFPGRILAIY 96 (100)
T ss_pred cCHHHHHHHHHHCCCCEEEEE
Confidence 53 33356778899887764
No 244
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=54.92 E-value=55 Score=28.57 Aligned_cols=41 Identities=15% Similarity=-0.064 Sum_probs=33.7
Q ss_pred CCChHHHHHHHHHHHHHhcCceEEEEEeCc----chHHHHHHhhhh
Q 011291 204 PYSMAFSVLATLYFIDILAAEKAILVGHSA----GALVAVNSYFEA 245 (489)
Q Consensus 204 ~~~~~~~~~dl~~~l~~l~~~~v~liGhS~----Gg~ial~~a~~~ 245 (489)
.|+.+.+++.+.++++..+ ..++++|+|. |..++-++|.+.
T Consensus 90 ~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 90 GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 4677788899999988877 6799999998 888888888764
No 245
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=54.04 E-value=2.4e+02 Score=28.25 Aligned_cols=86 Identities=21% Similarity=0.088 Sum_probs=53.2
Q ss_pred CCCcEEEEccCCCCccchH--HhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCh-HHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWN--RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSM-AFSVLATLY 216 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~--~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dl~~ 216 (489)
+.|..|+..|+-. .+-|. .++..|-.- ..+.-|.|=-|.+=- .+...+ ..+.+-|..
T Consensus 288 KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~P---fLL~~DpRleGGaFY----------------lGs~eyE~~I~~~I~~ 347 (511)
T TIGR03712 288 KPPLNVYFSGYRP-AEGFEGYFMMKRLGAP---FLLIGDPRLEGGAFY----------------LGSDEYEQGIINVIQE 347 (511)
T ss_pred CCCeEEeeccCcc-cCcchhHHHHHhcCCC---eEEeeccccccceee----------------eCcHHHHHHHHHHHHH
Confidence 4566799999865 33332 234444321 455567775665521 122222 234444566
Q ss_pred HHHHhcCc--eEEEEEeCcchHHHHHHhhhh
Q 011291 217 FIDILAAE--KAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 217 ~l~~l~~~--~v~liGhS~Gg~ial~~a~~~ 245 (489)
.++.|+.+ .++|-|-|||.+-|+-+++..
T Consensus 348 ~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 348 KLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 77777764 699999999999999988764
No 246
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=53.46 E-value=65 Score=28.07 Aligned_cols=62 Identities=8% Similarity=0.046 Sum_probs=38.6
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCC-eEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSS-KVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 218 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~-~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l 218 (489)
+.-.|+++||...++......++......|| .|+....-|+- .++++...+
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP----------------------------~~d~vi~~l 188 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP----------------------------LVDTVIEYL 188 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC----------------------------cHHHHHHHH
Confidence 3457899999988776654555554444488 66665543322 134455666
Q ss_pred HHhcCceEEEE
Q 011291 219 DILAAEKAILV 229 (489)
Q Consensus 219 ~~l~~~~v~li 229 (489)
+.-++++++|+
T Consensus 189 ~~~~~~~v~L~ 199 (265)
T COG4822 189 RKNGIKEVHLI 199 (265)
T ss_pred HHcCCceEEEe
Confidence 66677877765
No 247
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=51.20 E-value=12 Score=35.34 Aligned_cols=30 Identities=17% Similarity=0.214 Sum_probs=24.1
Q ss_pred HHHHHHhcCceEEEEEeCcchHHHHHHhhh
Q 011291 215 LYFIDILAAEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 215 ~~~l~~l~~~~v~liGhS~Gg~ial~~a~~ 244 (489)
..+++..|+++-.++|||+|=+.|+.++..
T Consensus 75 ~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 75 ARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhcccccccceeeccchhhHHHHHHCCc
Confidence 345567788999999999999998866654
No 248
>PRK10279 hypothetical protein; Provisional
Probab=50.15 E-value=24 Score=33.06 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=28.7
Q ss_pred HHHHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHh
Q 011291 214 TLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAA 251 (489)
Q Consensus 214 l~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~ 251 (489)
+...++..++..-.++|.|+|+.++..||....+.+..
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~~l~~ 60 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALED 60 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChHHHHH
Confidence 44555567888889999999999999999765444433
No 249
>PRK12467 peptide synthase; Provisional
Probab=49.98 E-value=50 Score=43.12 Aligned_cols=84 Identities=15% Similarity=-0.001 Sum_probs=59.9
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 221 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l 221 (489)
+.|++.|...+....+..+...|.. +..|+.+..++.-.... ...++..++....+.+.+.
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~--~~~~~~l~~~~~~~d~~-----------------~~~~~~~~~~~y~~~~~~~ 3753 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEG--DRHVLGLTCRHLLDDGW-----------------QDTSLQAMAVQYADYILWQ 3753 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCC--CCcEEEEeccccccccC-----------------CccchHHHHHHHHHHHHHh
Confidence 5599999998888877777777755 36888887765432221 2345666666666666665
Q ss_pred c-CceEEEEEeCcchHHHHHHhhh
Q 011291 222 A-AEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 222 ~-~~~v~liGhS~Gg~ial~~a~~ 244 (489)
. ..+..+.|+|+||.++..++..
T Consensus 3754 ~~~~p~~l~g~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3754 QAKGPYGLLGWSLGGTLARLVAEL 3777 (3956)
T ss_pred ccCCCeeeeeeecchHHHHHHHHH
Confidence 4 3478999999999999988764
No 250
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=48.26 E-value=2.5 Score=39.15 Aligned_cols=37 Identities=32% Similarity=0.240 Sum_probs=22.7
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCC
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDR 177 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~ 177 (489)
+-|.+++.||++............++.. ++.++..+.
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~-~~~~~~~~~ 84 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEK-GYRVLAGDA 84 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhc-eeEEeeecc
Confidence 4566777777776666544455556554 666665553
No 251
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=47.22 E-value=19 Score=33.63 Aligned_cols=30 Identities=20% Similarity=0.144 Sum_probs=24.4
Q ss_pred HHHHHHhcCceEEEEEeCcchHHHHHHhhh
Q 011291 215 LYFIDILAAEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 215 ~~~l~~l~~~~v~liGhS~Gg~ial~~a~~ 244 (489)
..+++..|+++-.++|||+|-+.|+.++..
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 345567788999999999999999877654
No 252
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=46.52 E-value=32 Score=35.00 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=28.0
Q ss_pred EEEEEeCcchHHHHHHhhhhh-hHHHhHHhhcccccCc
Q 011291 226 AILVGHSAGALVAVNSYFEAP-ERVAALILIAPAILAP 262 (489)
Q Consensus 226 v~liGhS~Gg~ial~~a~~~p-~~v~~lvl~~~~~~~~ 262 (489)
|+.-+.|-||..++..|.+.. ..|++++...|....+
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 556689999999998876543 4788888888776544
No 253
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=46.14 E-value=1.7e+02 Score=27.49 Aligned_cols=103 Identities=12% Similarity=-0.006 Sum_probs=50.3
Q ss_pred CCcEEEEccCC----CCc-cchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcC--CCCCCCCCChHHHHHH
Q 011291 141 GFPMVLFHGFG----ASV-FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTE--NKKPLNPYSMAFSVLA 213 (489)
Q Consensus 141 ~p~VlllHG~~----~~~-~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d 213 (489)
+..|+++-|-. ... .+--.+...|...-|-+++++-.+|.|.-.-...-. -..... .....-...+...+..
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvd-vrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVD-VRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHH-HHHhhhhhhhHHHHHHHHHHHHHH
Confidence 44677777642 221 222234445544237889998889988652100000 000000 0000111222222222
Q ss_pred HHH-HHHHhc-CceEEEEEeCcchHHHHHHhhh
Q 011291 214 TLY-FIDILA-AEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 214 l~~-~l~~l~-~~~v~liGhS~Gg~ial~~a~~ 244 (489)
... ++++.. .++|+++|+|-|++++-.+|..
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 222 223332 4799999999999999877754
No 254
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=44.91 E-value=1.3e+02 Score=27.78 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=25.7
Q ss_pred CChHHHHHHHHH-HHHHh-cCceEEEEEeCcchHHHHHHhh
Q 011291 205 YSMAFSVLATLY-FIDIL-AAEKAILVGHSAGALVAVNSYF 243 (489)
Q Consensus 205 ~~~~~~~~dl~~-~l~~l-~~~~v~liGhS~Gg~ial~~a~ 243 (489)
..+++.+.+... +++.. ..+++.++|+|-|+++|-.+|.
T Consensus 71 ~g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 71 WGIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred cchHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHH
Confidence 344454444333 33444 3468999999999999987763
No 255
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=44.46 E-value=21 Score=33.23 Aligned_cols=31 Identities=16% Similarity=0.027 Sum_probs=24.5
Q ss_pred HHHHHHHhcCceEEEEEeCcchHHHHHHhhh
Q 011291 214 TLYFIDILAAEKAILVGHSAGALVAVNSYFE 244 (489)
Q Consensus 214 l~~~l~~l~~~~v~liGhS~Gg~ial~~a~~ 244 (489)
+..+++..++++..++|||+|=+.|+.++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 3345566788999999999999999877654
No 256
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=41.74 E-value=29 Score=34.47 Aligned_cols=42 Identities=24% Similarity=0.295 Sum_probs=31.3
Q ss_pred HhcCceEEEEEeCcchHHHHHHhhhh-----hhHHHhHHhhcccccC
Q 011291 220 ILAAEKAILVGHSAGALVAVNSYFEA-----PERVAALILIAPAILA 261 (489)
Q Consensus 220 ~l~~~~v~liGhS~Gg~ial~~a~~~-----p~~v~~lvl~~~~~~~ 261 (489)
..|.++|.|||+|.|+-+...+.... -+.|..+++++++...
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 35788999999999999988655432 2357788888877543
No 257
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=40.66 E-value=35 Score=27.11 Aligned_cols=29 Identities=17% Similarity=0.161 Sum_probs=21.4
Q ss_pred CCCCcEEEEccCCCCccchH--HhhHHhHhh
Q 011291 139 KIGFPMVLFHGFGASVFSWN--RAMKPLAKT 167 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~~~--~~~~~L~~~ 167 (489)
.++|.|+-+||++|....|- -+++.|..+
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~ 80 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKS 80 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhc
Confidence 36789999999999988863 355665554
No 258
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=39.94 E-value=27 Score=32.41 Aligned_cols=30 Identities=17% Similarity=0.101 Sum_probs=23.7
Q ss_pred HHHHHhc-CceEEEEEeCcchHHHHHHhhhh
Q 011291 216 YFIDILA-AEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 216 ~~l~~l~-~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
.++...+ +.+..++|||+|=+.|+.++...
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 4445566 88999999999999998777543
No 259
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=39.35 E-value=37 Score=28.65 Aligned_cols=32 Identities=25% Similarity=0.116 Sum_probs=24.7
Q ss_pred HHHHHHhcCceEEEEEeCcchHHHHHHhhhhh
Q 011291 215 LYFIDILAAEKAILVGHSAGALVAVNSYFEAP 246 (489)
Q Consensus 215 ~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p 246 (489)
.+.++..++..-.+.|-|+|+.++..++...+
T Consensus 17 l~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 17 AKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 34444457777889999999999999988653
No 260
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=37.51 E-value=35 Score=32.08 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=25.8
Q ss_pred HHHHHHHhcCceEEEEEeCcchHHHHHHhhhh
Q 011291 214 TLYFIDILAAEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 214 l~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
+...++..++..-.++|.|+|+.++..+|..+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 44555666887778999999999999999864
No 261
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=36.40 E-value=47 Score=32.81 Aligned_cols=37 Identities=24% Similarity=0.242 Sum_probs=27.3
Q ss_pred HHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHH
Q 011291 217 FIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALI 253 (489)
Q Consensus 217 ~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lv 253 (489)
.+...++.+=++.|.|.|+.+|..++...++.+..+.
T Consensus 94 aL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~l 130 (421)
T cd07230 94 ALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPELL 130 (421)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3333355666899999999999999987776665544
No 262
>PLN02748 tRNA dimethylallyltransferase
Probab=36.32 E-value=1.4e+02 Score=29.87 Aligned_cols=91 Identities=13% Similarity=0.023 Sum_probs=54.1
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeC----CCCC--CCCCCCCC--CCCCCCCcCCCCCCCCCChHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFD----RPAF--GLTSRVFP--FQQPTPDTENKKPLNPYSMAFSV 211 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D----~~G~--G~S~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 211 (489)
..+.||+|-|-.++... .+...|+.+.+..||..| ++|. |....+.. ...+.-......+...|+..++.
T Consensus 20 ~~~~~i~i~GptgsGKs--~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F~ 97 (468)
T PLN02748 20 GKAKVVVVMGPTGSGKS--KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDFR 97 (468)
T ss_pred CCCCEEEEECCCCCCHH--HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHHH
Confidence 45568888888777655 556677776677899888 3342 22211110 01111111223345779999999
Q ss_pred HHHHHHHHHhc--CceEEEEEeC
Q 011291 212 LATLYFIDILA--AEKAILVGHS 232 (489)
Q Consensus 212 ~dl~~~l~~l~--~~~v~liGhS 232 (489)
.+....++.+. .+-.+|+|.|
T Consensus 98 ~~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 98 DHAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHhcCCCeEEEcCh
Confidence 99999998763 2345666654
No 263
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=36.10 E-value=1.8e+02 Score=24.87 Aligned_cols=45 Identities=22% Similarity=0.181 Sum_probs=31.8
Q ss_pred CCCCcEEEEccCCCCccc--hHHhhHHhHhhCCCeEEEeCCCC--CCCCC
Q 011291 139 KIGFPMVLFHGFGASVFS--WNRAMKPLAKTTSSKVLAFDRPA--FGLTS 184 (489)
Q Consensus 139 ~~~p~VlllHG~~~~~~~--~~~~~~~L~~~~G~~Vi~~D~~G--~G~S~ 184 (489)
+..+.||.+.|..++... -..+.+.|.+. |+.++.+|--. ||.+.
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~-G~~~y~LDGDnvR~gL~~ 68 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAK-GYHVYLLDGDNVRHGLNR 68 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHc-CCeEEEecChhHhhcccC
Confidence 456789999999887654 23455667775 99999999432 55553
No 264
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=35.36 E-value=1.4e+02 Score=26.23 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=25.8
Q ss_pred CCCcEEEEccCCCCccc--hH-HhhHHhHhhCCCeEEEeCC
Q 011291 140 IGFPMVLFHGFGASVFS--WN-RAMKPLAKTTSSKVLAFDR 177 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~--~~-~~~~~L~~~~G~~Vi~~D~ 177 (489)
+++.|.||+-.+..... |. .....|.+ .|+.|.-+++
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~-lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAK-LGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHH-cCCeeeeeec
Confidence 46789999988776655 43 34455666 4898888776
No 265
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=35.30 E-value=44 Score=28.70 Aligned_cols=31 Identities=26% Similarity=0.188 Sum_probs=23.8
Q ss_pred HHHHHHhcCceEEEEEeCcchHHHHHHhhhh
Q 011291 215 LYFIDILAAEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 215 ~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
...++..++..-.++|-|.|+.++..++...
T Consensus 18 l~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3344445666778999999999999998754
No 266
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=33.87 E-value=1.3e+02 Score=29.43 Aligned_cols=110 Identities=13% Similarity=0.071 Sum_probs=59.1
Q ss_pred cEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCC-------CCCCcCC-CCCCCCCChHHHHHHH
Q 011291 143 PMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQ-------PTPDTEN-KKPLNPYSMAFSVLAT 214 (489)
Q Consensus 143 ~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~dl 214 (489)
.|+++--+-.-...+..+.+.+.+. |..|+.+|.-=.|.......-.. +..+..- ........++.+.+.+
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~-G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQ-GVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHC-CCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 4555533333345576777777775 99999999744443332211000 0000000 0001122334444445
Q ss_pred HHHHHHh----cCceEEEEEeCcchHHHHHHhhhhhhHHHhHH
Q 011291 215 LYFIDIL----AAEKAILVGHSAGALVAVNSYFEAPERVAALI 253 (489)
Q Consensus 215 ~~~l~~l----~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lv 253 (489)
..++..+ .++-++-+|.|.|..++.......|=-+-+++
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlm 124 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLM 124 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEE
Confidence 5555554 24668899999999999987776664444444
No 267
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=33.29 E-value=43 Score=31.45 Aligned_cols=32 Identities=25% Similarity=0.228 Sum_probs=26.9
Q ss_pred HHHHHHHhcCceEEEEEeCcchHHHHHHhhhh
Q 011291 214 TLYFIDILAAEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 214 l~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
+.+.++..+++.-+|.|.|+|+.++..+|..+
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 45666777889999999999999999999853
No 268
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=33.08 E-value=48 Score=30.46 Aligned_cols=32 Identities=22% Similarity=0.108 Sum_probs=25.5
Q ss_pred HHHHHHHhcCceEEEEEeCcchHHHHHHhhhh
Q 011291 214 TLYFIDILAAEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 214 l~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
+.+.++..++.--.+.|.|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44555666887778899999999999999763
No 269
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=33.08 E-value=75 Score=22.27 Aligned_cols=32 Identities=28% Similarity=0.350 Sum_probs=22.0
Q ss_pred CCcEEEEccCC-CCccchHHhhHHhHhhCCCeEEEe
Q 011291 141 GFPMVLFHGFG-ASVFSWNRAMKPLAKTTSSKVLAF 175 (489)
Q Consensus 141 ~p~VlllHG~~-~~~~~~~~~~~~L~~~~G~~Vi~~ 175 (489)
.|.++++||.. ... +.++..++++.|..++.+
T Consensus 31 ~~~~~lvhGga~~Ga---D~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGA---DRIAARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCCCCH---HHHHHHHHHHCCCeeEEe
Confidence 46789999977 332 356777777667776654
No 270
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=32.86 E-value=2e+02 Score=28.88 Aligned_cols=60 Identities=18% Similarity=0.111 Sum_probs=36.6
Q ss_pred CCCChHHHH---HHHHHHHHHhc--CceEEEEEeCcchHHHHH-Hhh-hhhhHHHhHHhhcccccCc
Q 011291 203 NPYSMAFSV---LATLYFIDILA--AEKAILVGHSAGALVAVN-SYF-EAPERVAALILIAPAILAP 262 (489)
Q Consensus 203 ~~~~~~~~~---~dl~~~l~~l~--~~~v~liGhS~Gg~ial~-~a~-~~p~~v~~lvl~~~~~~~~ 262 (489)
+...+.|.. ..+.+-+...| .++|.|+|-|.|+.-... +.+ .-...++..|+-++....+
T Consensus 192 GNmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~p 258 (601)
T KOG4389|consen 192 GNMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNNP 258 (601)
T ss_pred CccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCCC
Confidence 334444443 34444455554 468999999999875542 221 1123688999988876554
No 271
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=32.75 E-value=60 Score=31.90 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=27.7
Q ss_pred HHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHh
Q 011291 219 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALIL 254 (489)
Q Consensus 219 ~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl 254 (489)
...++.+=+++|.|.|+.+|..++...++.+..++.
T Consensus 90 ~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~~ 125 (407)
T cd07232 90 LDADLLPNVISGTSGGSLVAALLCTRTDEELKQLLV 125 (407)
T ss_pred HhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHHh
Confidence 333666677999999999999999877777766543
No 272
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=32.40 E-value=66 Score=30.21 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=26.7
Q ss_pred HHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHH
Q 011291 219 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALI 253 (489)
Q Consensus 219 ~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lv 253 (489)
...++.+-++.|.|.|+.+|..++...++.+..+.
T Consensus 91 ~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~~~~ 125 (323)
T cd07231 91 VEHQLLPRVIAGSSVGSIVCAIIATRTDEELQSFF 125 (323)
T ss_pred HHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 33466667799999999999999887666666554
No 273
>PLN02840 tRNA dimethylallyltransferase
Probab=32.15 E-value=1.9e+02 Score=28.59 Aligned_cols=91 Identities=15% Similarity=0.135 Sum_probs=51.9
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCC----CCC--CCCCCCCCC--CCCCCCcCCCCCCCCCChHHHH
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDR----PAF--GLTSRVFPF--QQPTPDTENKKPLNPYSMAFSV 211 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~----~G~--G~S~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 211 (489)
....+|+|-|..++... .+...|+++.+..+|..|- +|. |........ ..+....+-..+...|+..++.
T Consensus 19 ~~~~vi~I~GptgsGKT--tla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F~ 96 (421)
T PLN02840 19 KKEKVIVISGPTGAGKS--RLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAFF 96 (421)
T ss_pred cCCeEEEEECCCCCCHH--HHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHHH
Confidence 34567888887776654 5566777765667888885 332 221111000 0011111223355779999999
Q ss_pred HHHHHHHHHhc--CceEEEEEeC
Q 011291 212 LATLYFIDILA--AEKAILVGHS 232 (489)
Q Consensus 212 ~dl~~~l~~l~--~~~v~liGhS 232 (489)
++....++.+. .+-.+|+|.+
T Consensus 97 ~~A~~~I~~i~~rgkiPIvVGGT 119 (421)
T PLN02840 97 DDARRATQDILNRGRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCc
Confidence 99999888762 2334566644
No 274
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=32.02 E-value=1.1e+02 Score=28.70 Aligned_cols=89 Identities=24% Similarity=0.215 Sum_probs=55.3
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeC----CCCC--CCCCCC--CCCCCCCCCcCCCCCCCCCChHHHHHH
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFD----RPAF--GLTSRV--FPFQQPTPDTENKKPLNPYSMAFSVLA 213 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D----~~G~--G~S~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d 213 (489)
+.+++|-|-.++... .+.-.|+++.|-.||..| ++|. |..... .....+..-.+...+...|+..++..+
T Consensus 3 ~~~i~I~GPTAsGKT--~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~~ 80 (308)
T COG0324 3 PKLIVIAGPTASGKT--ALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQRD 80 (308)
T ss_pred ccEEEEECCCCcCHH--HHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHHH
Confidence 567778777666654 456678887788999999 4443 222211 111111112233445678999999999
Q ss_pred HHHHHHHhcC--ceEEEEEeC
Q 011291 214 TLYFIDILAA--EKAILVGHS 232 (489)
Q Consensus 214 l~~~l~~l~~--~~v~liGhS 232 (489)
+...++.+.. +-.+|+|.|
T Consensus 81 a~~~i~~i~~rgk~pIlVGGT 101 (308)
T COG0324 81 ALAAIDDILARGKLPILVGGT 101 (308)
T ss_pred HHHHHHHHHhCCCCcEEEccH
Confidence 9999988743 456777755
No 275
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=31.06 E-value=57 Score=28.93 Aligned_cols=30 Identities=27% Similarity=0.123 Sum_probs=23.1
Q ss_pred HHHHHhcCceEEEEEeCcchHHHHHHhhhh
Q 011291 216 YFIDILAAEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 216 ~~l~~l~~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
..++..+++.-.++|-|.|+.++..+|...
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 334444666678999999999999998754
No 276
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=30.57 E-value=70 Score=27.01 Aligned_cols=31 Identities=26% Similarity=0.165 Sum_probs=23.6
Q ss_pred HHHHHhcCceEEEEEeCcchHHHHHHhhhhh
Q 011291 216 YFIDILAAEKAILVGHSAGALVAVNSYFEAP 246 (489)
Q Consensus 216 ~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p 246 (489)
..++..++..-.+.|.|.|+.++..++....
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3344556666788899999999998887654
No 277
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.49 E-value=73 Score=28.06 Aligned_cols=33 Identities=24% Similarity=0.190 Sum_probs=25.2
Q ss_pred HHHHHHHhcCceEEEEEeCcchHHHHHHhhhhh
Q 011291 214 TLYFIDILAAEKAILVGHSAGALVAVNSYFEAP 246 (489)
Q Consensus 214 l~~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p 246 (489)
+...++..++..-.+.|.|.|+.++..++...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 334445556666688899999999999998764
No 278
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=29.96 E-value=74 Score=30.95 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=28.6
Q ss_pred HHHHHhcCceEEEEEeCcchHHHHHHhhhhhhHHHhHHh
Q 011291 216 YFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALIL 254 (489)
Q Consensus 216 ~~l~~l~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lvl 254 (489)
..+...++.+=+|.|.|.|+.+|..+|...++.+..+..
T Consensus 103 kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l~ 141 (391)
T cd07229 103 KALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFLD 141 (391)
T ss_pred HHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHHh
Confidence 333444666667999999999999999876666665553
No 279
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=29.96 E-value=46 Score=33.95 Aligned_cols=31 Identities=19% Similarity=0.086 Sum_probs=25.4
Q ss_pred HHHH-HHhcCceEEEEEeCcchHHHHHHhhhh
Q 011291 215 LYFI-DILAAEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 215 ~~~l-~~l~~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
..++ +..|+++-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 578899999999999999999888655
No 280
>PRK02399 hypothetical protein; Provisional
Probab=29.64 E-value=2.3e+02 Score=27.68 Aligned_cols=108 Identities=15% Similarity=0.057 Sum_probs=57.2
Q ss_pred EEEccCCCCc-cchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCC-------CCCCcC-CCCCCCCCChHHHHHHHH
Q 011291 145 VLFHGFGASV-FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQ-------PTPDTE-NKKPLNPYSMAFSVLATL 215 (489)
Q Consensus 145 lllHG~~~~~-~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~dl~ 215 (489)
|+|=|-..+. ..+..+.+.+.+. |..|+.+|.-..|....+..-.. +..... ........-++.+.+...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~-g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 84 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAA-GLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAA 84 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHC-CCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHH
Confidence 4444544444 4465666666664 99999999844442221110000 000000 000011122344555555
Q ss_pred HHHHHh----cCceEEEEEeCcchHHHHHHhhhhhhHHHhHH
Q 011291 216 YFIDIL----AAEKAILVGHSAGALVAVNSYFEAPERVAALI 253 (489)
Q Consensus 216 ~~l~~l----~~~~v~liGhS~Gg~ial~~a~~~p~~v~~lv 253 (489)
.++..+ .++-++-+|.|.|..++.......|=-+-+++
T Consensus 85 ~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlm 126 (406)
T PRK02399 85 AFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLM 126 (406)
T ss_pred HHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEE
Confidence 565543 35678899999999999977776664444443
No 281
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=27.55 E-value=3.5e+02 Score=26.52 Aligned_cols=73 Identities=12% Similarity=0.129 Sum_probs=42.9
Q ss_pred CcEEEEccCCCCcc---chHHhhHHhHhhCCCeEEEeCCCCC--CCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Q 011291 142 FPMVLFHGFGASVF---SWNRAMKPLAKTTSSKVLAFDRPAF--GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY 216 (489)
Q Consensus 142 p~VlllHG~~~~~~---~~~~~~~~L~~~~G~~Vi~~D~~G~--G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ 216 (489)
.+||+++-.....+ .....+..|.+. |+.|+-+..--+ |.... ....+.++++..+..
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~-G~~vv~P~~g~~ac~~~g~----------------g~~~~~~~i~~~v~~ 175 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDD-GYIFIEPDSGLLACGDEGK----------------GRLAEPETIVKAAER 175 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHC-CcEEECCCCcccccccccC----------------CCCCCHHHHHHHHHH
Confidence 46777776543322 235567788885 888876663222 33321 234567777777776
Q ss_pred HHHH---hcCceEEEEEe
Q 011291 217 FIDI---LAAEKAILVGH 231 (489)
Q Consensus 217 ~l~~---l~~~~v~liGh 231 (489)
.+.. +..+++.+.|.
T Consensus 176 ~~~~~~~~~~~~vlit~g 193 (390)
T TIGR00521 176 EFSPKEDLEGKRVLITAG 193 (390)
T ss_pred HHhhccccCCceEEEecC
Confidence 6643 44466777766
No 282
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=27.54 E-value=1.2e+02 Score=26.37 Aligned_cols=63 Identities=10% Similarity=0.047 Sum_probs=42.4
Q ss_pred HhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeCcchHHH
Q 011291 159 RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVA 238 (489)
Q Consensus 159 ~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS~Gg~ia 238 (489)
..++.+..+ ++.++.+|-+|.... -.+..+.+..+++.+....++++=-+..+.-.
T Consensus 74 ~~l~~~~~~-~~D~vlIDT~Gr~~~-----------------------d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~ 129 (196)
T PF00448_consen 74 EALEKFRKK-GYDLVLIDTAGRSPR-----------------------DEELLEELKKLLEALNPDEVHLVLSATMGQED 129 (196)
T ss_dssp HHHHHHHHT-TSSEEEEEE-SSSST-----------------------HHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHH
T ss_pred HHHHHHhhc-CCCEEEEecCCcchh-----------------------hHHHHHHHHHHhhhcCCccceEEEecccChHH
Confidence 344555554 799999999866543 23667778888888877778877666666666
Q ss_pred HHHhhhh
Q 011291 239 VNSYFEA 245 (489)
Q Consensus 239 l~~a~~~ 245 (489)
+..+..+
T Consensus 130 ~~~~~~~ 136 (196)
T PF00448_consen 130 LEQALAF 136 (196)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6544443
No 283
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=26.66 E-value=47 Score=27.64 Aligned_cols=36 Identities=22% Similarity=0.096 Sum_probs=25.4
Q ss_pred CCCCCChHHHHHHH----HHHHHHh----cCceEEEEEeCcchH
Q 011291 201 PLNPYSMAFSVLAT----LYFIDIL----AAEKAILVGHSAGAL 236 (489)
Q Consensus 201 ~~~~~~~~~~~~dl----~~~l~~l----~~~~v~liGhS~Gg~ 236 (489)
....++..+++.-+ ..+.+.. .+++|.|+|.|++..
T Consensus 73 ~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 73 TLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred eeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 45678888999888 4444444 356999999999988
No 284
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=26.21 E-value=1.5e+02 Score=26.04 Aligned_cols=40 Identities=3% Similarity=-0.095 Sum_probs=24.9
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhC-CCeEEEeCCCC
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTT-SSKVLAFDRPA 179 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~-G~~Vi~~D~~G 179 (489)
..+.|++|.-.+.....|........++. |+.+..++...
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~ 70 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD 70 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC
Confidence 45678999876665444444333333347 88988887643
No 285
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.88 E-value=1.1e+02 Score=26.96 Aligned_cols=37 Identities=22% Similarity=0.188 Sum_probs=27.9
Q ss_pred CCCcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCC
Q 011291 140 IGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRP 178 (489)
Q Consensus 140 ~~p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~ 178 (489)
+.|++|+|.|+....--+ .+..+++++ ||.|++--.+
T Consensus 5 ~~~k~VlItgcs~GGIG~-ala~ef~~~-G~~V~AtaR~ 41 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGY-ALAKEFARN-GYLVYATARR 41 (289)
T ss_pred cCCCeEEEeecCCcchhH-HHHHHHHhC-CeEEEEEccc
Confidence 457788888876655443 678889997 9999997654
No 286
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=25.81 E-value=59 Score=25.18 Aligned_cols=32 Identities=25% Similarity=0.260 Sum_probs=25.9
Q ss_pred EEEEccCCCCccchHHhhHHhHhhCCCeEEEeCC
Q 011291 144 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDR 177 (489)
Q Consensus 144 VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~ 177 (489)
||+|.|.+++... .++..|+++.|+.++-.|-
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecc
Confidence 6889999888766 5677788766899999987
No 287
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=25.58 E-value=43 Score=28.78 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=24.1
Q ss_pred cEEEEccC---CCCccchHHhhHHhHhhCCCeEEEeC
Q 011291 143 PMVLFHGF---GASVFSWNRAMKPLAKTTSSKVLAFD 176 (489)
Q Consensus 143 ~VlllHG~---~~~~~~~~~~~~~L~~~~G~~Vi~~D 176 (489)
.||++|.. ..+......+++.|.++ ||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~-Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEK-GYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHC-CCEEEEHH
Confidence 59999942 23344566788889886 99998875
No 288
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=24.92 E-value=1.4e+02 Score=20.31 Aligned_cols=41 Identities=20% Similarity=0.323 Sum_probs=32.6
Q ss_pred HhhCCCCEEEEecCCCCCCccccHHHHHHHHHHHHHHhhCCC
Q 011291 437 SRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFGYS 478 (489)
Q Consensus 437 ~~~~~~~~~~~i~g~gH~~~~e~p~~v~~~i~~fl~~~~~~~ 478 (489)
.+.+|+.++..+.| --++..|.-++|.+.|.+|-++...-.
T Consensus 22 ie~~PDttItLinG-kkyvVkEsveEVi~kI~~y~rkI~~~~ 62 (67)
T COG1582 22 IEAFPDTTITLING-KKYVVKESVEEVINKIIEYRRKIGSLA 62 (67)
T ss_pred hhccCCcEEEEEcC-cEEEEcccHHHHHHHHHHHHHHhheeh
Confidence 46789999988864 667777888999999999998875443
No 289
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=24.89 E-value=95 Score=26.13 Aligned_cols=30 Identities=23% Similarity=0.148 Sum_probs=22.6
Q ss_pred HHHHHhcCceEEEEEeCcchHHHHHHhhhh
Q 011291 216 YFIDILAAEKAILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 216 ~~l~~l~~~~v~liGhS~Gg~ial~~a~~~ 245 (489)
..++..+...-.++|-|.|+.++..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 344444666668899999999999888654
No 290
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=24.67 E-value=98 Score=25.88 Aligned_cols=79 Identities=19% Similarity=0.125 Sum_probs=47.7
Q ss_pred EEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCc
Q 011291 145 VLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAE 224 (489)
Q Consensus 145 lllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~ 224 (489)
|++-|.|++..+-..++.+|..+ |+--.+-+|..-.|.....- ..-..+|.++.. ....++.++.+
T Consensus 44 vl~cGNGgSaadAqHfaael~gR--f~~eR~~lpaIaLt~dsS~l---------Tai~NDy~yd~v---FsRqveA~g~~ 109 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR--FEKERPSLPAIALSTDSSVL---------TAIANDYGYDEV---FSRQVEALGQP 109 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH--HHhcCCCCCeeEeecccHHH---------hhhhccccHHHH---HHHHHHhcCCC
Confidence 56668888888877888888775 55555555554444211000 011234444443 23566777877
Q ss_pred eEEEEEeCcchHH
Q 011291 225 KAILVGHSAGALV 237 (489)
Q Consensus 225 ~v~liGhS~Gg~i 237 (489)
-=+++|.|--|.-
T Consensus 110 GDvLigISTSGNS 122 (176)
T COG0279 110 GDVLIGISTSGNS 122 (176)
T ss_pred CCEEEEEeCCCCC
Confidence 7789999988853
No 291
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=24.48 E-value=61 Score=28.78 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=26.3
Q ss_pred CcEEEEccC-CCCccchHHhhHHhHhhCCCeEEEeC
Q 011291 142 FPMVLFHGF-GASVFSWNRAMKPLAKTTSSKVLAFD 176 (489)
Q Consensus 142 p~VlllHG~-~~~~~~~~~~~~~L~~~~G~~Vi~~D 176 (489)
..||++|.. ..+......+++.|.++ ||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~-Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQ-GYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHC-CCEEEEhH
Confidence 369999975 34455677789999997 99998875
No 292
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=24.27 E-value=1.1e+02 Score=24.41 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=21.3
Q ss_pred CCcEEEEccCCCC-------------ccchHH-----------hhHHhHhhCCCeEEEe
Q 011291 141 GFPMVLFHGFGAS-------------VFSWNR-----------AMKPLAKTTSSKVLAF 175 (489)
Q Consensus 141 ~p~VlllHG~~~~-------------~~~~~~-----------~~~~L~~~~G~~Vi~~ 175 (489)
..+|||+||..-+ .+.|.. .+..|.+ .|++|+.+
T Consensus 57 y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~-~GwrvlvV 114 (150)
T COG3727 57 YRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQ-LGWRVLVV 114 (150)
T ss_pred ceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHH-cCCeEEEE
Confidence 4579999996421 123432 3456777 49998864
No 293
>COG3933 Transcriptional antiterminator [Transcription]
Probab=24.23 E-value=2.9e+02 Score=27.27 Aligned_cols=72 Identities=14% Similarity=0.150 Sum_probs=55.3
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHh
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 221 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l 221 (489)
..||+.||....+.. ..++.+|..+ --+.++|.| -..+..+..+.+.+.+++.
T Consensus 110 ~vIiiAHG~sTASSm-aevanrLL~~--~~~~aiDMP------------------------Ldvsp~~vle~l~e~~k~~ 162 (470)
T COG3933 110 KVIIIAHGYSTASSM-AEVANRLLGE--EIFIAIDMP------------------------LDVSPSDVLEKLKEYLKER 162 (470)
T ss_pred eEEEEecCcchHHHH-HHHHHHHhhc--cceeeecCC------------------------CcCCHHHHHHHHHHHHHhc
Confidence 468999998765544 4667777765 478899987 4467788888888999988
Q ss_pred cCceEEEEEeCcchHHHHH
Q 011291 222 AAEKAILVGHSAGALVAVN 240 (489)
Q Consensus 222 ~~~~v~liGhS~Gg~ial~ 240 (489)
+..+=.++=..||......
T Consensus 163 ~~~~GlllLVDMGSL~~f~ 181 (470)
T COG3933 163 DYRSGLLLLVDMGSLTSFG 181 (470)
T ss_pred CccCceEEEEecchHHHHH
Confidence 8777677778999987763
No 294
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=23.86 E-value=3.9e+02 Score=24.78 Aligned_cols=17 Identities=24% Similarity=0.370 Sum_probs=11.7
Q ss_pred CceEEEEEeCcchHHHH
Q 011291 223 AEKAILVGHSAGALVAV 239 (489)
Q Consensus 223 ~~~v~liGhS~Gg~ial 239 (489)
...-.++|+|-=.++..
T Consensus 210 lg~Pilvg~SRKsfig~ 226 (282)
T PRK11613 210 FNLPLLVGMSRKSMIGQ 226 (282)
T ss_pred CCCCEEEEecccHHHHh
Confidence 35578999996666553
No 295
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=23.82 E-value=1.1e+02 Score=27.73 Aligned_cols=24 Identities=42% Similarity=0.564 Sum_probs=18.6
Q ss_pred EEEEeCcchHHHHHHhhhhhhHHHh
Q 011291 227 ILVGHSAGALVAVNSYFEAPERVAA 251 (489)
Q Consensus 227 ~liGhS~Gg~ial~~a~~~p~~v~~ 251 (489)
.+.|-|+|+.++..++. .++++..
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~~~~~ 57 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APEKIEE 57 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChHHHHH
Confidence 78899999999999984 3444443
No 296
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=23.53 E-value=66 Score=29.55 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=26.8
Q ss_pred cEEEEccCCCCccchHHhhHHhHhhCCCeEEEeC
Q 011291 143 PMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFD 176 (489)
Q Consensus 143 ~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D 176 (489)
.||++|....+......++..|.++ ||.++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~k-Gy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEK-GYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHC-CCEEEeHH
Confidence 5889997766666677889999987 99998875
No 297
>COG2069 CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=23.00 E-value=5.9e+02 Score=23.63 Aligned_cols=49 Identities=8% Similarity=0.074 Sum_probs=33.7
Q ss_pred hHhhCCCeEEEeCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHhcCceEEEEEeC
Q 011291 164 LAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHS 232 (489)
Q Consensus 164 L~~~~G~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~liGhS 232 (489)
..++.|-..+.+.+-+.+-- .......+.+..++++++.++. -++||.|
T Consensus 159 ~Vk~fgadmvTiHlIsTdPk------------------i~D~p~~EAak~lEdvLqAVdv--PiiiGGS 207 (403)
T COG2069 159 CVKKFGADMVTIHLISTDPK------------------IKDTPAKEAAKTLEDVLQAVDV--PIIIGGS 207 (403)
T ss_pred HHHHhCCceEEEEeecCCcc------------------ccCCCHHHHHHHHHHHHHhcCc--CEEecCC
Confidence 33445888999888643321 2445678889999999999864 3667777
No 298
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=22.75 E-value=1.2e+02 Score=28.71 Aligned_cols=19 Identities=21% Similarity=0.394 Sum_probs=16.1
Q ss_pred EEEEeCcchHHHHHHhhhh
Q 011291 227 ILVGHSAGALVAVNSYFEA 245 (489)
Q Consensus 227 ~liGhS~Gg~ial~~a~~~ 245 (489)
.+.|.|+||.+|..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4679999999999998754
No 299
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=22.46 E-value=2.9e+02 Score=24.76 Aligned_cols=37 Identities=16% Similarity=0.103 Sum_probs=23.8
Q ss_pred CCcEEEEccCCCC--ccchHH-hhHHhHhhCCCeEEEeCCC
Q 011291 141 GFPMVLFHGFGAS--VFSWNR-AMKPLAKTTSSKVLAFDRP 178 (489)
Q Consensus 141 ~p~VlllHG~~~~--~~~~~~-~~~~L~~~~G~~Vi~~D~~ 178 (489)
+|.|+||+=.... ...|.. ....+.+ .|+.|..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~-lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAP-LGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHH-CCCEEEEeccc
Confidence 4679999876633 333333 4445555 59999988865
No 300
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=21.98 E-value=2.9e+02 Score=26.02 Aligned_cols=78 Identities=19% Similarity=0.109 Sum_probs=44.0
Q ss_pred CcEEEEccCCCCccchHHhhHHhHhhCCCeEEEeCCC----C--CCCCCCCCCC--CCCCCCcCCCCCCCCCChHHHHHH
Q 011291 142 FPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRP----A--FGLTSRVFPF--QQPTPDTENKKPLNPYSMAFSVLA 213 (489)
Q Consensus 142 p~VlllHG~~~~~~~~~~~~~~L~~~~G~~Vi~~D~~----G--~G~S~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d 213 (489)
+.||+|-|-.++... .++..|+++.+..||..|-. | +|........ ..+--......+...++..++.++
T Consensus 4 ~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~~ 81 (307)
T PRK00091 4 PKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQRD 81 (307)
T ss_pred ceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHHH
Confidence 468888888777654 56667777667788888763 1 1211111000 000001111223456788888888
Q ss_pred HHHHHHHh
Q 011291 214 TLYFIDIL 221 (489)
Q Consensus 214 l~~~l~~l 221 (489)
....++.+
T Consensus 82 a~~~i~~i 89 (307)
T PRK00091 82 ALAAIADI 89 (307)
T ss_pred HHHHHHHH
Confidence 88888765
No 301
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=21.48 E-value=1.4e+02 Score=26.69 Aligned_cols=31 Identities=26% Similarity=0.150 Sum_probs=22.4
Q ss_pred HHHHHhcCc--eEEEEEeCcchHHHHHHhhhhh
Q 011291 216 YFIDILAAE--KAILVGHSAGALVAVNSYFEAP 246 (489)
Q Consensus 216 ~~l~~l~~~--~v~liGhS~Gg~ial~~a~~~p 246 (489)
+.+...++. .-.++|-|.|+.++..++...+
T Consensus 19 ~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 19 SLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 333334554 4579999999999999988654
No 302
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=20.72 E-value=1e+02 Score=28.18 Aligned_cols=15 Identities=33% Similarity=0.660 Sum_probs=12.6
Q ss_pred cCceEEEEEeCcchH
Q 011291 222 AAEKAILVGHSAGAL 236 (489)
Q Consensus 222 ~~~~v~liGhS~Gg~ 236 (489)
.++.|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 457899999999974
No 303
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=20.67 E-value=1.6e+02 Score=26.54 Aligned_cols=23 Identities=35% Similarity=0.413 Sum_probs=18.9
Q ss_pred EEEEeCcchHHHHHHhhhhh-hHH
Q 011291 227 ILVGHSAGALVAVNSYFEAP-ERV 249 (489)
Q Consensus 227 ~liGhS~Gg~ial~~a~~~p-~~v 249 (489)
.++|-|.|+.++..++...+ +.+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~~~~~ 57 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVSMEEA 57 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCCHHHH
Confidence 88999999999999988653 443
No 304
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=20.41 E-value=4e+02 Score=24.53 Aligned_cols=59 Identities=17% Similarity=0.289 Sum_probs=40.2
Q ss_pred ccCCccEEEEecCCCCCCCchhHHHHHhhCCCCEEEEecC-CCCCC-ccccHHHHHHHHHHHHHHhh
Q 011291 411 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKN-CGHVP-QEEKVEEFVSIVARFLQRAF 475 (489)
Q Consensus 411 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~g-~gH~~-~~e~p~~v~~~i~~fl~~~~ 475 (489)
....+||+++.|++ ...++..+.+|+++.+.++. .|++. ..-.|++..+.|.+=.++.+
T Consensus 144 g~~gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~~Al 204 (270)
T cd08769 144 GEFGVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVKEAL 204 (270)
T ss_pred hhcCCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHHHHH
Confidence 45689999999975 24566667779999888864 35433 33456777777766665554
No 305
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=20.21 E-value=5.9e+02 Score=25.03 Aligned_cols=73 Identities=12% Similarity=0.153 Sum_probs=42.8
Q ss_pred CCcEEEEccCCCCccc---hHHhhHHhHhhCCCeEEEeCCCC---CCCCCCCCCCCCCCCCcCCCCCCCCCChHHHHHHH
Q 011291 141 GFPMVLFHGFGASVFS---WNRAMKPLAKTTSSKVLAFDRPA---FGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLAT 214 (489)
Q Consensus 141 ~p~VlllHG~~~~~~~---~~~~~~~L~~~~G~~Vi~~D~~G---~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 214 (489)
+.|||+++......+. ....+..|.+. |+.|+-++. | +|... .....+.++++..+
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~-G~~ii~P~~-g~la~~~~g----------------~gr~~~~~~I~~~~ 177 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSR-GVEIIGPAS-GRLACGDVG----------------PGRMAEPEEIVAAA 177 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHC-CCEEECCCC-ccccCCCcC----------------CCCCCCHHHHHHHH
Confidence 4578888755433222 34567788885 999886653 3 23322 12345667777777
Q ss_pred HHHHHH--hcCceEEEEEe
Q 011291 215 LYFIDI--LAAEKAILVGH 231 (489)
Q Consensus 215 ~~~l~~--l~~~~v~liGh 231 (489)
...+.. +..+++.+.|.
T Consensus 178 ~~~~~~~~l~gk~vlITgG 196 (399)
T PRK05579 178 ERALSPKDLAGKRVLITAG 196 (399)
T ss_pred HHHhhhcccCCCEEEEeCC
Confidence 666643 44456777776
Done!