BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011292
(489 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 216/455 (47%), Gaps = 30/455 (6%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ + PL+G LP L + + KYGPIYS+R+G T+IV ++ K+
Sbjct: 10 PKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLI 69
Query: 99 TNDRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIA-TTDLLSSHRLELLKHVRY 157
+ + RP +A + A A G +W+ R++A T L + L+ +
Sbjct: 70 KKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIIC 129
Query: 158 SEVDTFIKDLYSRCSEN---AFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGS 214
E+ T L + ++ +F P V ++ +I + FN S + + + + E
Sbjct: 130 QEISTLCDMLATHNGQSIDISF-PVFVAVTNVISLICFNTSYKNGDPELNVIQNYNE--- 185
Query: 215 EGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQ 274
I+ K++ L D +PWL+ F ++ KI + + N + E+ +
Sbjct: 186 --GIIDNLSKDS--------LVDLVPWLKI--FPNKTLEKLKSHVKIRNDLLNKILENYK 233
Query: 275 RKLQGEG--DFMDVLL-SKIEDNTVMSGHTRDTVIKATALIL-----IF-TGSESTYLGI 325
K + + + +D L+ +K+ + +G +D+ + + IL IF G E+T +
Sbjct: 234 EKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVV 293
Query: 326 IWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTG 385
WTL+ LL++P+ KK EE+D +VG R SD L L A ++E LR+ P P+
Sbjct: 294 KWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLI 353
Query: 386 IREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHF 445
+A D IG + V KGT +I+N+W LH + + W P +F PERFL A + +
Sbjct: 354 PHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNP-AGTQLISPSV 412
Query: 446 EYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
Y+PF G RSC G Q + L +A +LQ FDL
Sbjct: 413 SYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDL 447
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 193/457 (42%), Gaps = 30/457 (6%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P P+G WPLIGH+ L + + P L ++ +YG + +R+G P +++S + ++
Sbjct: 14 PGPWG-WPLIGHM-LTLGKNPHLA-LSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALV 70
Query: 99 TNDRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIA---------TTDLLSSHRL 149
RP + + ++ G W R++A +D SS
Sbjct: 71 RQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSC 130
Query: 150 ELLKHVRYSEVDTFIKDLYS-RCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSARE 208
L +HV E + I L FNP + V+ + N+ + G+R+
Sbjct: 131 YLEEHVS-KEAEVLISTLQELMAGPGHFNPYRYVVVSVT-----NVICAICFGRRYDHNH 184
Query: 209 FGEQGSEGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNW 268
E + + G D IP L ++ + + + +K +
Sbjct: 185 -----QELLSLVNLNNNFGEVVGSGNPADFIPILRYLP-NPSLNAFKDLNEKFYSFMQKM 238
Query: 269 LEEHAQRKLQGE-GDFMDVLLSKIEDNTV---MSGHTRDTVIKATALILIFTGSESTYLG 324
++EH + +G D D L+ ++ + + D I L L G ++
Sbjct: 239 VKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTA 298
Query: 325 IIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVT 384
I W+L L+ +P+ +K QEELD +GR R SD +L Y+ A + ET R P T
Sbjct: 299 ISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFT 358
Query: 385 GIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQH 444
D + G+++PKG + VN W+++ D ++W NP EF PERFLT +D
Sbjct: 359 IPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSE 418
Query: 445 FEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLA 481
+ I F G+R C G T V L LA +LQ + +
Sbjct: 419 -KVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFS 454
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 185/414 (44%), Gaps = 19/414 (4%)
Query: 71 YGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLATRPSIAAGKYLGYDNAVFALAPYGR 130
YG I+SL LG T++++ +++VK+C + A RP + + + + YGR
Sbjct: 47 YGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLN-SRYGR 105
Query: 131 YWRDIRKIATTDLLSSHRLELLKHVRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQL 190
W D R++A + + E F D F+ +LI
Sbjct: 106 GWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFD-----FKQLITNA 160
Query: 191 TFNISLRLIAGKRFSAREFGEQGS-EGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQG 249
NI+ +I G+RF+ + Q E + N + + VF L +A PW+ + F
Sbjct: 161 VSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASA---SVF-LYNAFPWIGILPFGK 216
Query: 250 HIGSMRRTAKKIDDVIGNWLEEHA-QRKLQGEGDFMDVLLSKIED--NTVMSGHTRDTVI 306
H + R A + D + +E+ + RK Q F+D L +++ N S +++ +I
Sbjct: 217 H-QQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLI 275
Query: 307 KATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKY 366
+ ++I G+E+T + W + + +P + Q+E+D+ +G + + D + Y
Sbjct: 276 FSVGELII-AGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPY 334
Query: 367 LRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEF 426
A++ E LR P+ ED + GY +PKGT +I N++ +H D + W +P F
Sbjct: 335 TEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVF 394
Query: 427 RPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
PERFL + + +PFS GRR C G + L +LQ F L
Sbjct: 395 HPERFLDSSGYF---AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHL 445
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 185/414 (44%), Gaps = 19/414 (4%)
Query: 71 YGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLATRPSIAAGKYLGYDNAVFALAPYGR 130
YG I+SL LG T++++ +++VK+C + A RP + + + + YGR
Sbjct: 47 YGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLN-SRYGR 105
Query: 131 YWRDIRKIATTDLLSSHRLELLKHVRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQL 190
W D R++A + + E F D F+ +LI
Sbjct: 106 GWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFD-----FKQLITNA 160
Query: 191 TFNISLRLIAGKRFSAREFGEQGS-EGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQG 249
NI+ +I G+RF+ + Q E + N + + VF L +A PW+ + F
Sbjct: 161 VSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASA---SVF-LYNAFPWIGILPFGK 216
Query: 250 HIGSMRRTAKKIDDVIGNWLEEHA-QRKLQGEGDFMDVLLSKIED--NTVMSGHTRDTVI 306
H + R A + D + +E+ + RK Q F+D L +++ N S +++ +I
Sbjct: 217 H-QQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLI 275
Query: 307 KATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKY 366
+ ++I G+E+T + W + + +P + Q+E+D+ +G + + D + Y
Sbjct: 276 FSVGELII-AGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPY 334
Query: 367 LRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEF 426
A++ E LR P+ ED + GY +PKGT +I N++ +H D + W +P F
Sbjct: 335 TEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVF 394
Query: 427 RPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
PERFL + + +PFS GRR C G + L +LQ F L
Sbjct: 395 HPERFLDSSGYF---AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHL 445
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 197/478 (41%), Gaps = 69/478 (14%)
Query: 37 TAPEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDC 96
+ PEP+G WPL+GH+ L + + P L ++ +YG + +R+G P L++S + ++
Sbjct: 17 SPPEPWG-WPLLGHV-LTLGKNPHLA-LSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQA 73
Query: 97 FTTNDRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIA---------TTDLLSSH 147
RP + + ++ G W R++A +D SS
Sbjct: 74 LVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSS 133
Query: 148 RLELLKHVRYSEVDTFIKDLYSRCSE--------NAFNPAKVVISKLIEQLTFNISLRLI 199
L +HV K L SR E + +N V ++ +I + F
Sbjct: 134 SCYLEEHVSKEA-----KALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPES 188
Query: 200 AGKRFS----AREFGEQGSEG----------WRINRAIKEATYLTGVFVLGDAIPWLEWI 245
+ + S EF E S G + N A++ F+ W
Sbjct: 189 SDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFL------WFLQK 242
Query: 246 DFQGHIGSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFM--DVLLSKIEDNTVMSGHTRD 303
Q H + + + D+ G L +H+++ + G+ + + +++ + D + G D
Sbjct: 243 TVQEHYQDFDKNS--VRDITGA-LFKHSKKGPRASGNLIPQEKIVNLVND---IFGAGFD 296
Query: 304 TVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKN 363
TV A I W+L L+ P+ +K Q+ELD +GR+R SD
Sbjct: 297 TVTTA----------------ISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQ 340
Query: 364 LKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENP 423
L YL A + ET R P T D + G+++PK + VN W+++ DP +WE+P
Sbjct: 341 LPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDP 400
Query: 424 CEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLA 481
EFRPERFLT + + F G+R C G + L LA +LQ + +
Sbjct: 401 SEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFS 458
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 184/441 (41%), Gaps = 40/441 (9%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P PF AWPLIG+ + + +A +YG ++ +RLG P ++++ +
Sbjct: 12 PGPF-AWPLIGNAAAVGQAAHLS--FARLARRYGDVFQIRLGSCPIVVLNGERAIHQALV 68
Query: 99 TNDRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLS------SHRLELL 152
A RPS A+ + + ++ A Y +W+ R+ A + + + R L
Sbjct: 69 QQGSAFADRPSFASFRVVSGGRSM-AFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLE 127
Query: 153 KHVRYSEVDTFIKDLYSRCSENAF-NPAKVVISKLIEQLTFNISLRLIAGKRFSAR--EF 209
HV SE + L ++ AF +P + + + N+ + G R+S EF
Sbjct: 128 GHV-LSEARELVALLVRGSADGAFLDPRPLTVVAVA-----NVMSAVCFGCRYSHDDPEF 181
Query: 210 GEQGSEGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWL 269
E S R + G L D +PWL++ F + ++ R ++++ N++
Sbjct: 182 RELLSHNEEFGRTV-------GAGSLVDVMPWLQY--FPNPVRTVFREFEQLNRNFSNFI 232
Query: 270 EEHAQRKLQ------GEGDFMDVLLSKIEDNTVMSGH---TRDTVIKATALIL-IFTGSE 319
+ R + D MD + E H R + A I IF S+
Sbjct: 233 LDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQ 292
Query: 320 STY-LGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIY 378
T + W L L +P + Q ELD VGRDR D NL Y+ A + E +R
Sbjct: 293 DTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFS 352
Query: 379 PPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADV 438
PVT + + GYH+PK T + VN W ++ DP W NP F P RFL +
Sbjct: 353 SFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLI 412
Query: 439 DVNTQHFEYIPFSFGRRSCPG 459
+ + I FS G+R C G
Sbjct: 413 NKDLTSRVMI-FSVGKRRCIG 432
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 196/466 (42%), Gaps = 46/466 (9%)
Query: 42 FGAWPLIG-HLPLLIAE-----EPVCKI-LGAIADKYGPIYSLRLGKHPTLIVSSWEIVK 94
+G W L HLP L+ +P I L ++ K GP+Y LRLG ++++S ++
Sbjct: 20 WGRWKLRNLHLPPLVPGFLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIE 79
Query: 95 DCFTTNDRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKH 154
+ A RP I + K + +L Y W+ +K+ + LL R +
Sbjct: 80 EAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSM--- 136
Query: 155 VRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGS 214
VD ++ R A P V I K LT +I L G +
Sbjct: 137 --EPWVDQLTQEFCERMRVQAGAP--VTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDC 192
Query: 215 EGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQ 274
+ +K T+ + D +P+L + G + +++ + D ++ L H +
Sbjct: 193 ----VQDLMK--TWDHWSIQILDMVPFLRFFPNPG-LWRLKQAIENRDHMVEKQLRRHKE 245
Query: 275 RKLQGE-GDFMDVLLS-----KIEDN--TVMSGHTRDTVIKATALILIFTGSESTYLGII 326
+ G+ D D +L ++E+ ++ GH +V+ L G+E+T +
Sbjct: 246 SMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVD-----LFIGGTETTASTLS 300
Query: 327 WTLSLLLNHPKELKKAQEELDVHVGRD---RWVNESDMKNLKYLRAIVKETLRIYPPGPV 383
W ++ LL+HP+ ++ QEELD +G V D L L A + E LR+ P P+
Sbjct: 301 WAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPL 360
Query: 384 TGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQ 443
I GY +P+G +I N+ H D +WE P EFRP+RFL A+
Sbjct: 361 ALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGANPSA--- 417
Query: 444 HFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL--ATVGVYP 487
+ F G R C G + + + LAR+LQ F L VG P
Sbjct: 418 ----LAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALP 459
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 184/442 (41%), Gaps = 48/442 (10%)
Query: 59 PVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLATRPSIAAGKYLGY 118
P C + ++G ++SL+L P ++++ V++ T+ A RP + + LG+
Sbjct: 33 PYC--FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGF 90
Query: 119 ---DNAVFALAPYGRYWRDIRKIATTDL----LSSHRLELLKHVRYSEVDTFIKDLYSRC 171
VF LA YG WR+ R+ + + L L LE +E + ++
Sbjct: 91 GPRSQGVF-LARYGPAWREQRRFSVSTLRNLGLGKKSLEQW----VTEEAACLCAAFANH 145
Query: 172 SENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSARE-----FGEQGSEGWRINRAIKEA 226
S F P + L+++ N+ L G+RF + + EG + +E+
Sbjct: 146 SGRPFRP-----NGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLK-----EES 195
Query: 227 TYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQR--KLQGEGDFM 284
+L V +A+P L + G + R K + L EH Q D
Sbjct: 196 GFLREVL---NAVPVL--LHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLT 250
Query: 285 DVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQ 343
+ L+++E + D ++ L G +T + W L L++ HP ++ Q
Sbjct: 251 EAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQ 310
Query: 344 EELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKG 403
+E+D +G+ R D ++ Y A++ E R P+ D E+ G+ +PKG
Sbjct: 311 QEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKG 370
Query: 404 TRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHF----EYIPFSFGRRSCPG 459
T LI N+ + +D +WE P F PE FL HF ++PFS GRR+C G
Sbjct: 371 TTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQG-------HFVKPEAFLPFSAGRRACLG 423
Query: 460 MTSGLQIVQLTLARILQGFDLA 481
+ L +LQ F +
Sbjct: 424 EPLARMELFLFFTSLLQHFSFS 445
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 183/442 (41%), Gaps = 48/442 (10%)
Query: 59 PVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLATRPSIAAGKYLGY 118
P C + ++G ++SL+L P ++++ V++ T+ A RP + + LG+
Sbjct: 33 PYC--FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGF 90
Query: 119 ---DNAVFALAPYGRYWRDIRKIATTDL----LSSHRLELLKHVRYSEVDTFIKDLYSRC 171
VF LA YG WR+ R+ + + L L LE +E + ++
Sbjct: 91 GPRSQGVF-LARYGPAWREQRRFSVSTLRNLGLGKKSLEQW----VTEEAACLCAAFANH 145
Query: 172 SENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSARE-----FGEQGSEGWRINRAIKEA 226
S F P + L+++ N+ L G+RF + + EG + +E+
Sbjct: 146 SGRPFRP-----NGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLK-----EES 195
Query: 227 TYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQR--KLQGEGDFM 284
+L V +A+P I G + R K + L EH Q D
Sbjct: 196 GFLREVL---NAVPVDRHIP--ALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLT 250
Query: 285 DVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQ 343
+ L+++E + D ++ L G +T + W L L++ HP ++ Q
Sbjct: 251 EAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQ 310
Query: 344 EELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKG 403
+E+D +G+ R D ++ Y A++ E R P+ D E+ G+ +PKG
Sbjct: 311 QEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKG 370
Query: 404 TRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHF----EYIPFSFGRRSCPG 459
T LI N+ + +D +WE P F PE FL HF ++PFS GRR+C G
Sbjct: 371 TTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQG-------HFVKPEAFLPFSAGRRACLG 423
Query: 460 MTSGLQIVQLTLARILQGFDLA 481
+ L +LQ F +
Sbjct: 424 EPLARMELFLFFTSLLQHFSFS 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 199/452 (44%), Gaps = 48/452 (10%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWE-----IVKDCFT-- 98
P +G++ L + C KYG ++ G+ P L ++ + +VK+C++
Sbjct: 23 PFLGNI--LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVF 80
Query: 99 TNDRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHV-RY 157
TN R +G+ + ++A W+ +R + + S E++ + +Y
Sbjct: 81 TNRRPFGP---------VGFMKSAISIA-EDEEWKRLRSLLSPTFTSGKLKEMVPIIAQY 130
Query: 158 SEVDTFIKDLYSRCSENAFNPAKVVIS----KLIEQLTFNISLRLIAGKRFSAREFGEQG 213
D +++L K V +I +F +++ + + F E
Sbjct: 131 G--DVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQ---DPFVENT 185
Query: 214 SEGWRINRAIKEATYLTGVFVLGDAIPWLEWID---FQGHIGS-MRRTAKKIDDVIGNWL 269
+ R + + + V IP LE ++ F + + +R++ K++ + + L
Sbjct: 186 KKLLRFDFL---DPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKE---SRL 239
Query: 270 EEHAQRKLQGEGDFMDVLL-SKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWT 328
E+ + ++ DF+ +++ S+ T D + A ++I IF G E+T + +
Sbjct: 240 EDTQKHRV----DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFI 295
Query: 329 LSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIRE 388
+ L HP +K QEE+D + + ++YL +V ETLR++P + R
Sbjct: 296 MYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERV 354
Query: 389 AMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYI 448
+D EI G +PKG +++ + LHRDP+ W P +F PERF + D N + Y
Sbjct: 355 CKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD---NIDPYIYT 411
Query: 449 PFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
PF G R+C GM L ++L L R+LQ F
Sbjct: 412 PFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 443
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 199/452 (44%), Gaps = 48/452 (10%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWE-----IVKDCFT-- 98
P +G++ L + C KYG ++ G+ P L ++ + +VK+C++
Sbjct: 24 PFLGNI--LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVF 81
Query: 99 TNDRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHV-RY 157
TN R +G+ + ++A W+ +R + + S E++ + +Y
Sbjct: 82 TNRRPFGP---------VGFMKSAISIA-EDEEWKRLRSLLSPTFTSGKLKEMVPIIAQY 131
Query: 158 SEVDTFIKDLYSRCSENAFNPAKVVIS----KLIEQLTFNISLRLIAGKRFSAREFGEQG 213
D +++L K V +I +F +++ + + F E
Sbjct: 132 G--DVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQ---DPFVENT 186
Query: 214 SEGWRINRAIKEATYLTGVFVLGDAIPWLEWID---FQGHIGS-MRRTAKKIDDVIGNWL 269
+ R + + + V IP LE ++ F + + +R++ K++ + + L
Sbjct: 187 KKLLRFDFL---DPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKE---SRL 240
Query: 270 EEHAQRKLQGEGDFMDVLL-SKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWT 328
E+ + ++ DF+ +++ S+ T D + A ++I IF G E+T + +
Sbjct: 241 EDTQKHRV----DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFI 296
Query: 329 LSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIRE 388
+ L HP +K QEE+D + + ++YL +V ETLR++P + R
Sbjct: 297 MYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERV 355
Query: 389 AMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYI 448
+D EI G +PKG +++ + LHRDP+ W P +F PERF + D N + Y
Sbjct: 356 CKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD---NIDPYIYT 412
Query: 449 PFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
PF G R+C GM L ++L L R+LQ F
Sbjct: 413 PFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 444
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 199/452 (44%), Gaps = 48/452 (10%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWE-----IVKDCFT-- 98
P +G++ L + C KYG ++ G+ P L ++ + +VK+C++
Sbjct: 25 PFLGNI--LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVF 82
Query: 99 TNDRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHV-RY 157
TN R +G+ + ++A W+ +R + + S E++ + +Y
Sbjct: 83 TNRRPFGP---------VGFMKSAISIAE-DEEWKRLRSLLSPTFTSGKLKEMVPIIAQY 132
Query: 158 SEVDTFIKDLYSRCSENAFNPAKVVIS----KLIEQLTFNISLRLIAGKRFSAREFGEQG 213
D +++L K V +I +F +++ + + F E
Sbjct: 133 G--DVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQ---DPFVENT 187
Query: 214 SEGWRINRAIKEATYLTGVFVLGDAIPWLEWID---FQGHIGS-MRRTAKKIDDVIGNWL 269
+ R + + + V IP LE ++ F + + +R++ K++ + + L
Sbjct: 188 KKLLRFDFL---DPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKE---SRL 241
Query: 270 EEHAQRKLQGEGDFMDVLL-SKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWT 328
E+ + ++ DF+ +++ S+ T D + A ++I IF G E+T + +
Sbjct: 242 EDTQKHRV----DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFI 297
Query: 329 LSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIRE 388
+ L HP +K QEE+D + + ++YL +V ETLR++P + R
Sbjct: 298 MYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERV 356
Query: 389 AMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYI 448
+D EI G +PKG +++ + LHRDP+ W P +F PERF + D N + Y
Sbjct: 357 CKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD---NIDPYIYT 413
Query: 449 PFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
PF G R+C GM L ++L L R+LQ F
Sbjct: 414 PFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 445
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 195/462 (42%), Gaps = 51/462 (11%)
Query: 38 APEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCF 97
P PF P+IG++ L I + + K L ++ YGP++++ LG PT+++ +E VK+
Sbjct: 14 GPTPF---PIIGNI-LQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEAL 69
Query: 98 TTNDRVLATRPSI------AAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLEL 151
A R S+ + G + + NA + W+++R+ + L++ +
Sbjct: 70 VDLGEEFAGRGSVPILEKVSKGLGIAFSNA--------KTWKEMRRFS---LMTLRNFGM 118
Query: 152 LKHVRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGE 211
K + + L + +P ++ N+ +I RF ++
Sbjct: 119 GKRSIEDRIQEEARCLVEELRKTNASPCDPTF--ILGCAPCNVICSVIFHNRFDYKD--- 173
Query: 212 QGSEGWRINRAIKEATYLTGVFVLGDAIPWLEWID--------FQGHIGSMRRTAKKIDD 263
E ++ ++ E L G PWL+ + F G ++ + A I +
Sbjct: 174 --EEFLKLMESLHENVELLGT-------PWLQVYNNFPALLDYFPGIHKTLLKNADYIKN 224
Query: 264 VIGNWLEEHAQR-KLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTY 322
I ++EH + + DF+D L K+E + VI + L G+E+T
Sbjct: 225 FIMEKVKEHQKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLVIAVSDLF--GAGTETTS 282
Query: 323 LGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGP 382
+ ++L LLL HP+ + QEE++ +GR R D + Y A++ E R P
Sbjct: 283 TTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLP 342
Query: 383 VTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNT 442
D Y +PKGT +I ++ + D + + NP F P FL D N
Sbjct: 343 TNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFL----DESGNF 398
Query: 443 QHFEY-IPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATV 483
+ +Y +PFS G+R C G + L L ILQ F L ++
Sbjct: 399 KKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQSL 440
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 198/451 (43%), Gaps = 28/451 (6%)
Query: 38 APEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCF 97
P P P++G+L L + + + + + +KYG ++++ LG P +++ + +++
Sbjct: 14 GPSPL---PVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 98 TTNDRVLATRPSIAAGK--YLGYDNAVFALAPYGRYWRDIRK--IATTDLLSSHRLELLK 153
+ R IA + GY +FA G WR +R+ +AT + + +
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGY-GVIFA---NGERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 154 HVRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQG 213
++ E +++L R S+ A + + L +T NI ++ GKRF ++
Sbjct: 126 RIQ-EEARCLVEEL--RKSKGAL----LDNTLLFHSITSNIICSIVFGKRFDYKDPVFLR 178
Query: 214 SEGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEH- 272
+++ + VF L +L++ F G + R ++I+ IG +E+H
Sbjct: 179 LLDLFFQSFSLISSFSSQVFELFSG--FLKY--FPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 273 AQRKLQGEGDFMDVLLSKIE-DNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSL 331
A DF+DV L ++E D + S + T L L F G+E+T + + L
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
+L +P ++ Q+E++ +G R D + Y A++ E R+ P +
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 392 DCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFS 451
D + GY +PK T + + DPR +E P F P FL + + N ++PFS
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEG---FMPFS 411
Query: 452 FGRRSCPGMTSGLQIVQLTLARILQGFDLAT 482
G+R C G + L ILQ F +A+
Sbjct: 412 LGKRICAGEGIARTELFLFFTTILQNFSIAS 442
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 198/451 (43%), Gaps = 28/451 (6%)
Query: 38 APEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCF 97
P P P++G+L L + + + + + +KYG ++++ LG P +++ + +++
Sbjct: 14 GPSPL---PVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 98 TTNDRVLATRPSIAAGK--YLGYDNAVFALAPYGRYWRDIRK--IATTDLLSSHRLELLK 153
+ R IA + GY +FA G WR +R+ +AT + + +
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGY-GVIFA---NGERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 154 HVRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQG 213
++ E +++L R S+ A + + L +T NI ++ GKRF ++
Sbjct: 126 RIQ-EEARCLVEEL--RKSKGAL----LDNTLLFHSITSNIICSIVFGKRFDYKDPVFLR 178
Query: 214 SEGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEH- 272
+++ + VF L +L++ F G + R ++I+ IG +E+H
Sbjct: 179 LLDLFFQSFSLISSFSSQVFELFSG--FLKY--FPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 273 AQRKLQGEGDFMDVLLSKIE-DNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSL 331
A DF+DV L ++E D + S + T L L F G+E+T + + L
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
+L +P ++ Q+E++ +G R D + Y A++ E R+ P +
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 392 DCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFS 451
D + GY +PK T + + DPR +E P F P FL + + N ++PFS
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEG---FMPFS 411
Query: 452 FGRRSCPGMTSGLQIVQLTLARILQGFDLAT 482
G+R C G + L ILQ F +A+
Sbjct: 412 LGKRICLGEGIARTELFLFFTTILQNFSIAS 442
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 198/451 (43%), Gaps = 28/451 (6%)
Query: 38 APEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCF 97
P P P++G+L L + + + + + +KYG ++++ LG P +++ + +++
Sbjct: 14 GPSP---LPVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 98 TTNDRVLATRPSIAAGK--YLGYDNAVFALAPYGRYWRDIRK--IATTDLLSSHRLELLK 153
+ R IA + GY +FA G WR +R+ +AT + + +
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGY-GVIFA---NGERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 154 HVRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQG 213
++ E +++L R S+ A + + L +T NI ++ GKRF ++
Sbjct: 126 RIQ-EEARCLVEEL--RKSKGAL----LDNTLLFHSITSNIICSIVFGKRFDYKDPVFLR 178
Query: 214 SEGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEH- 272
+++ + VF L +L++ F G + R ++I+ IG +E+H
Sbjct: 179 LLDLFFQSFSLISSFSSQVFELFSG--FLKY--FPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 273 AQRKLQGEGDFMDVLLSKIE-DNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSL 331
A DF+DV L ++E D + S + T L L F G+E+T + + L
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
+L +P ++ Q+E++ +G R D + Y A++ E R+ P +
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 392 DCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFS 451
D + GY +PK T + + DPR +E P F P FL + + N ++PFS
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEG---FMPFS 411
Query: 452 FGRRSCPGMTSGLQIVQLTLARILQGFDLAT 482
G+R C G + L ILQ F +A+
Sbjct: 412 LGKRICLGEGIARTELFLFFTTILQNFSIAS 442
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 195/456 (42%), Gaps = 37/456 (8%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P PF P+IG+L + + + K +A ++GP+++L +G +++ ++ VK+
Sbjct: 13 PGPF-PLPIIGNL-FQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALL 70
Query: 99 TNDRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYS 158
+ R + A +F P W+DIR+ + T L + + R
Sbjct: 71 DYKDEFSGRGDLPAFHAHRDRGIIFNNGPT---WKDIRRFSLTTLRNYGMGKQGNESRIQ 127
Query: 159 EVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWR 218
F+ + + F+P + LI N+ ++ K F + + R
Sbjct: 128 REAHFLLEALRKTQGQPFDP-----TFLIGCAPCNVIADILFRKHFDYND-----EKFLR 177
Query: 219 INRAIKEATYLTGVFVLGDAIPWLE-WIDFQGHI----GSMRRTAKKIDDV---IGNWLE 270
+ E +L + PWL+ + +F + GS R+ K + +V + ++
Sbjct: 178 LMYLFNENFHLL-------STPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVK 230
Query: 271 EHAQR-KLQGEGDFMDVLLSKIED--NTVMSGHTRDTVIKATALILIFTGSESTYLGIIW 327
EH Q D D LL ++E ++ +T D I T L F G+E+T + +
Sbjct: 231 EHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDG-ITVTVADLFFAGTETTSTTLRY 289
Query: 328 TLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIR 387
L +L+ +P+ +K EE+D +G R D + + Y+ A+V E R P
Sbjct: 290 GLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPH 349
Query: 388 EAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEY 447
EA D GY +PKGT ++ + + D + + +P +F+PE FL + + +
Sbjct: 350 EATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY---F 406
Query: 448 IPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATV 483
PFS G+R C G + L L ILQ F+L +
Sbjct: 407 KPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPL 442
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 194/451 (43%), Gaps = 28/451 (6%)
Query: 38 APEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCF 97
P P P++G+L L + + + + + +KYG ++++ LG P +++ + +++
Sbjct: 14 GPSPL---PVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 98 TTNDRVLATRPSIAAGK--YLGYDNAVFALAPYGRYWRDIRK--IATTDLLSSHRLELLK 153
+ R IA + GY +FA G WR +R+ +AT + + +
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGY-GVIFA---NGERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 154 HVRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQG 213
++ E +++L R S+ A + + L +T NI ++ GKRF ++
Sbjct: 126 RIQ-EEARCLVEEL--RKSKGAL----LDNTLLFHSITSNIICSIVFGKRFDYKDPVFLR 178
Query: 214 SEGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEH- 272
+++ + VF L F G + R ++I+ IG +E+H
Sbjct: 179 LLDLFFQSFSLISSFSSQVFELFSGF----LKHFPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 273 AQRKLQGEGDFMDVLLSKIE-DNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSL 331
A DF+DV L ++E D + S + T L L F G+E+T + + L
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
+L +P ++ Q+E++ +G R D + Y A++ E R+ P +
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 392 DCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFS 451
D + GY +PK T + + DPR +E P F P FL + + N ++PFS
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEG---FMPFS 411
Query: 452 FGRRSCPGMTSGLQIVQLTLARILQGFDLAT 482
G+R C G + L ILQ F +A+
Sbjct: 412 LGKRICLGEGIARTELFLFFTTILQNFSIAS 442
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 198/469 (42%), Gaps = 62/469 (13%)
Query: 38 APEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCF 97
P P P+IG++ L I + +CK + YGP++++ G +P ++ +E VK+
Sbjct: 14 GPTPL---PIIGNM-LQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEAL 69
Query: 98 TTNDRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDL----LSSHRLE-LL 152
N + R + + + + ++ G+ W++IR+ + T L + +E +
Sbjct: 70 IDNGEEFSGRGNSPISQRI--TKGLGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRV 127
Query: 153 KHVRYSEVDTFIKDLYSRCSEN---AFNPAKVVISKLIEQ-LTFNISLRLIAGKRFSARE 208
+ + V+ K S C P V+ S + ++ + L KRF+
Sbjct: 128 QEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFN--- 184
Query: 209 FGEQGSEGWRINRAIKEATYLTGVFVLGDAIPWLEWID--------FQGHIGSMRRTAKK 260
E +RI + PW++ + F G + +
Sbjct: 185 ------ENFRILNS-----------------PWIQVCNNFPLLIDCFPGTHNKVLKNVAL 221
Query: 261 IDDVIGNWLEEH-AQRKLQGEGDFMDVLLSKIE---DNTVMSGHTRDTVIKATALILIFT 316
I ++EH A + DF+D L K+E DN + + V T L
Sbjct: 222 TRSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLV--GTVADLFVA 279
Query: 317 GSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLR 376
G+E+T + + L LLL HP+ K QEE+D +GR R D ++ Y A+V E R
Sbjct: 280 GTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQR 339
Query: 377 IYPPGPVTGIREAM-EDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTH 435
P TG+ A+ D + Y +PKGT ++ + + D + + NP F P FL
Sbjct: 340 YSDLVP-TGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFL--- 395
Query: 436 ADVDVNTQHFEY-IPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATV 483
D + N + +Y +PFS G+R C G + L L ILQ F+L +V
Sbjct: 396 -DKNGNFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSV 443
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 197/451 (43%), Gaps = 28/451 (6%)
Query: 38 APEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCF 97
P P P++G+L L + + + + + +KYG ++++ LG P +++ + +++
Sbjct: 14 GPSPL---PVLGNL-LQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 98 TTNDRVLATRPSIAAGK--YLGYDNAVFALAPYGRYWRDIRK--IATTDLLSSHRLELLK 153
+ R IA + GY +FA G WR +R+ +AT + + +
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGY-GVIFA---NGERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 154 HVRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQG 213
++ E +++L R S+ A + + L +T NI ++ GKRF ++
Sbjct: 126 RIQ-EEARCLVEEL--RKSKGAL----LDNTLLFHSITSNIICSIVFGKRFDYKDPVFLR 178
Query: 214 SEGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEH- 272
+++ + VF L +L++ F G + R ++I+ IG +E+H
Sbjct: 179 LLDLFFQSFSLISSFSSQVFELFSG--FLKY--FPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 273 AQRKLQGEGDFMDVLLSKIE-DNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSL 331
A DF+DV L ++E D + S + T L L G+E+T + + L
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLL 294
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
+L +P ++ Q+E++ +G R D + Y A++ E R+ P +
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 392 DCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFS 451
D + GY +PK T + + DPR +E P F P FL + + N ++PFS
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEG---FMPFS 411
Query: 452 FGRRSCPGMTSGLQIVQLTLARILQGFDLAT 482
G+R C G + L ILQ F +A+
Sbjct: 412 LGKRICLGEGIARTELFLFFTTILQNFSIAS 442
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 191/450 (42%), Gaps = 39/450 (8%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P IG+ L + E + L I+++YGP++++ LG +++ + V++ +
Sbjct: 19 PFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFS 77
Query: 106 TRPSIAAGKYL--GYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTF 163
R A ++ GY VF+ G + +R+ + L + R E F
Sbjct: 78 GRGEQATFDWVFKGY-GVVFS---NGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGF 133
Query: 164 IKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ D +P +S+ + N+ ++ G RF ++ E + R +
Sbjct: 134 LIDALRGTGGANIDPT-FFLSRTVS----NVISSIVFGDRFDYKD-----KEFLSLLRMM 183
Query: 224 KEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTA----KKIDDVIGNWLEEHAQRKLQG 279
+ T G + H+ ++ A + ++D I +E H QR L
Sbjct: 184 LGSFQFTST-STGQLYEMFSSV--MKHLPGPQQQAFQLLQGLEDFIAKKVE-HNQRTLDP 239
Query: 280 EG--DFMDVLLSKI---EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLN 334
DF+D L ++ E N + ++ V+ T L L F G+E+ + + LL+
Sbjct: 240 NSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVM--TTLNLFFAGTETVSTTLRYGFLLLMK 297
Query: 335 HPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCE 394
HP+ K EE+D +G++R D + Y+ A++ E R P+ R +D +
Sbjct: 298 HPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTK 357
Query: 395 IGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR 454
+ +PKGT + + + RDP + NP +F P+ FL + ++PFS G+
Sbjct: 358 FRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD---AFVPFSIGK 414
Query: 455 RSCPGMTSGLQIVQLTL--ARILQGFDLAT 482
R+C G GL ++L L ++Q F L +
Sbjct: 415 RNCFG--EGLARMELFLFFTTVMQNFRLKS 442
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 190/453 (41%), Gaps = 45/453 (9%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P IG+ L + E + L I+++YGP++++ LG +++ + V++ +
Sbjct: 19 PFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFS 77
Query: 106 TRPSIAAGKYL--GYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTF 163
R A ++ GY VF+ G + +R+ + L + R E F
Sbjct: 78 GRGEQATFDWVFKGY-GVVFS---NGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGF 133
Query: 164 IKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ D +P +S+ + N+ ++ G RF ++ +
Sbjct: 134 LIDALRGTGGANIDPT-FFLSRTVS----NVISSIVFGDRFD-----------YKDKEFL 177
Query: 224 KEATYLTGVFVLGDAIPWLEWIDFQG---HIGSMRRTA----KKIDDVIGNWLEEHAQRK 276
+ G+F + F H+ ++ A + ++D I +E H QR
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE-HNQRT 236
Query: 277 LQGEG--DFMDVLLSKI---EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSL 331
L DF+D L ++ E N + ++ V+ T L L G+E+ + + L
Sbjct: 237 LDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVM--TTLQLFIGGTETVSTTLRYGFLL 294
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ HP+ K EE+D +G++R D + Y+ A++ E R P++ R +
Sbjct: 295 LMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKK 354
Query: 392 DCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFS 451
D + + +PKGT + + + RDP + NP +F P+ FL + ++PFS
Sbjct: 355 DTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD---AFVPFS 411
Query: 452 FGRRSCPGMTSGLQIVQLTL--ARILQGFDLAT 482
G+R+C G GL ++L L ++Q F L +
Sbjct: 412 IGKRNCFG--EGLARMELFLFFTTVMQNFRLKS 442
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 190/453 (41%), Gaps = 45/453 (9%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P IG+ L + E + L I+++YGP++++ LG +++ + V++ +
Sbjct: 19 PFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFS 77
Query: 106 TRPSIAAGKYL--GYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTF 163
R A ++ GY VF+ G + +R+ + L + R E F
Sbjct: 78 GRGEQATFDWVFKGY-GVVFS---NGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGF 133
Query: 164 IKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ D +P +S+ + N+ ++ G RF ++ +
Sbjct: 134 LIDALRGTGGANIDPT-FFLSRTVS----NVISSIVFGDRFD-----------YKDKEFL 177
Query: 224 KEATYLTGVFVLGDAIPWLEWIDFQG---HIGSMRRTA----KKIDDVIGNWLEEHAQRK 276
+ G+F + F H+ ++ A + ++D I +E H QR
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVE-HNQRT 236
Query: 277 LQGEG--DFMDVLLSKI---EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSL 331
L DF+D L ++ E N + ++ V+ T L L G+E+ + + L
Sbjct: 237 LDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVM--TTLQLFIGGTETVSTTLRYGFLL 294
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ HP+ K EE+D +G++R D + Y+ A++ E R P++ R +
Sbjct: 295 LMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKK 354
Query: 392 DCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFS 451
D + + +PKGT + + + RDP + NP +F P+ FL + ++PFS
Sbjct: 355 DTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD---AFVPFS 411
Query: 452 FGRRSCPGMTSGLQIVQLTL--ARILQGFDLAT 482
G+R+C G GL ++L L ++Q F L +
Sbjct: 412 IGKRNCFG--EGLARMELFLFFTTVMQNFRLKS 442
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 190/453 (41%), Gaps = 45/453 (9%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P IG+ L + E + L I+++YGP++++ LG +++ + V++ +
Sbjct: 19 PFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFS 77
Query: 106 TRPSIAAGKYL--GYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTF 163
R A ++ GY VF+ G + +R+ + L + R E F
Sbjct: 78 GRGEQATFDWVFKGY-GVVFS---NGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGF 133
Query: 164 IKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ D +P +S+ + N+ ++ G RF ++ +
Sbjct: 134 LIDALRGTGGANIDPT-FFLSRTVS----NVISSIVFGDRFD-----------YKDKEFL 177
Query: 224 KEATYLTGVFVLGDAIPWLEWIDFQG---HIGSMRRTA----KKIDDVIGNWLEEHAQRK 276
+ G+F + F H+ ++ A + ++D I +E H QR
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE-HNQRT 236
Query: 277 LQGEG--DFMDVLLSKI---EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSL 331
L DF+D L ++ E N + ++ V+ T L L G+E+ + + L
Sbjct: 237 LDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVM--TTLNLFIGGTETVSTTLRYGFLL 294
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ HP+ K EE+D +G++R D + Y+ A++ E R P++ R +
Sbjct: 295 LMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKK 354
Query: 392 DCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFS 451
D + + +PKGT + + + RDP + NP +F P+ FL + ++PFS
Sbjct: 355 DTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD---AFVPFS 411
Query: 452 FGRRSCPGMTSGLQIVQLTL--ARILQGFDLAT 482
G+R+C G GL ++L L ++Q F L +
Sbjct: 412 IGKRNCFG--EGLARMELFLFFTTVMQNFRLKS 442
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 190/453 (41%), Gaps = 45/453 (9%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P IG+ L + E + L I+++YGP++++ LG +++ + V++ +
Sbjct: 19 PFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFS 77
Query: 106 TRPSIAAGKYL--GYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTF 163
R A ++ GY VF+ G + +R+ + L + R E F
Sbjct: 78 GRGEQATFDWVFKGY-GVVFS---NGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGF 133
Query: 164 IKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ D +P +S+ + N+ ++ G RF ++ +
Sbjct: 134 LIDALRGTGGANIDPT-FFLSRTVS----NVISSIVFGDRFD-----------YKDKEFL 177
Query: 224 KEATYLTGVFVLGDAIPWLEWIDFQG---HIGSMRRTA----KKIDDVIGNWLEEHAQRK 276
+ G+F + F H+ ++ A + ++D I +E H QR
Sbjct: 178 SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE-HNQRT 236
Query: 277 LQGEG--DFMDVLLSKI---EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSL 331
L DF+D L ++ E N + ++ V+ T L L G+E+ + + L
Sbjct: 237 LDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVM--TTLQLFVGGTETVSTTLRYGFLL 294
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ HP+ K EE+D +G++R D + Y+ A++ E R P++ R +
Sbjct: 295 LMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKK 354
Query: 392 DCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFS 451
D + + +PKGT + + + RDP + NP +F P+ FL + ++PFS
Sbjct: 355 DTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD---AFVPFS 411
Query: 452 FGRRSCPGMTSGLQIVQLTL--ARILQGFDLAT 482
G+R+C G GL ++L L ++Q F L +
Sbjct: 412 IGKRNCFG--EGLARMELFLFFTTVMQNFRLKS 442
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 185/450 (41%), Gaps = 39/450 (8%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P IG+ L + E + L I+++YGP++++ LG +++ + VK+ +
Sbjct: 19 PFIGNY-LQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFS 77
Query: 106 TRPSIAAGKYL--GYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTF 163
R A +L GY A G + +R+ + L + R E F
Sbjct: 78 GRGEQATFDWLFKGYGVAF----SNGERAKQLRRFSIATLRGFGVGKRGIEERIQEEAGF 133
Query: 164 IKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ D +P +S+ + N+ ++ G RF + E + R +
Sbjct: 134 LIDALRGTHGANIDPT-FFLSRTVS----NVISSIVFGDRFDYED-----KEFLSLLRMM 183
Query: 224 KEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKK----IDDVIGNWLEEHAQRKLQG 279
+ T G + H+ ++ A K ++D I +E H QR L
Sbjct: 184 LGSFQFTAT-STGQLYEMFSSV--MKHLPGPQQQAFKELQGLEDFIAKKVE-HNQRTLDP 239
Query: 280 EG--DFMDVLLSKI---EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLN 334
DF+D L ++ E N + ++ V+ T L L F G+E+ + + LL+
Sbjct: 240 NSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVM--TTLNLFFAGTETVSTTLRYGFLLLMK 297
Query: 335 HPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCE 394
HP+ K EE+D +G++R D + Y A++ E R P+ +D +
Sbjct: 298 HPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTK 357
Query: 395 IGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR 454
+ +PKGT + + + RDPR + NP +F P+ FL + ++PFS G+
Sbjct: 358 FRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDA---FVPFSIGK 414
Query: 455 RSCPGMTSGLQIVQLTL--ARILQGFDLAT 482
R C G GL ++L L I+Q F +
Sbjct: 415 RYCFG--EGLARMELFLFFTTIMQNFRFKS 442
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 203/444 (45%), Gaps = 25/444 (5%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P+IG++ L I + + K L ++ YGP+++L G P +++ +E VK+ +
Sbjct: 20 PVIGNI-LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFS 78
Query: 106 TRP--SIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTF 163
R +A G+ VF+ G+ W++IR+ + L++ + K V
Sbjct: 79 GRGIFPLAERANRGF-GIVFS---NGKKWKEIRRFS---LMTLRNFGMGKRSIEDRVQEE 131
Query: 164 IKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ L + +P ++ N+ +I KRF ++ + + ++N I
Sbjct: 132 ARCLVEELRKTKASPCDPTF--ILGCAPCNVICSIIFHKRFDYKD-QQFLNLMEKLNENI 188
Query: 224 KEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQR-KLQGEGD 282
K + + + + P +++ F G + + + I ++EH + + D
Sbjct: 189 KILSS-PWIQICNNFSPIIDY--FPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQD 245
Query: 283 FMDVLLSKIED--NTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELK 340
F+D L K+E + S T ++ ++ TA+ L G+E+T + + L LLL HP+
Sbjct: 246 FIDCFLMKMEKEKHNQPSEFTIES-LENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTA 304
Query: 341 KAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHV 400
K QEE++ +GR+R D ++ Y A+V E R P + D + Y +
Sbjct: 305 KVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLI 364
Query: 401 PKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGM 460
PKGT +++++ + D + + NP F P FL + + ++PFS G+R C G
Sbjct: 365 PKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY---FMPFSAGKRICVGE 421
Query: 461 T-SGLQIVQLTLARILQGFDLATV 483
+G+++ L L ILQ F+L ++
Sbjct: 422 ALAGMELF-LFLTSILQNFNLKSL 444
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 199/457 (43%), Gaps = 51/457 (11%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P+IG++ L I + + K L ++ YGP+++L G P +++ +E VK+ +
Sbjct: 18 PVIGNI-LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFS 76
Query: 106 TRP--SIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTF 163
R +A G+ VF+ G+ W++IR+ + L++ + K V
Sbjct: 77 GRGIFPLAERANRGF-GIVFS---NGKKWKEIRRFS---LMTLRNFGMGKRSIEDRVQEE 129
Query: 164 IKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ L + +P ++ N+ +I KRF
Sbjct: 130 ARCLVEELRKTKASPCDPTF--ILGCAPCNVICSIIFHKRFD-----------------Y 170
Query: 224 KEATYLTGVFVLGDAI-----PWLEWID--------FQGHIGSMRRTAKKIDDVIGNWLE 270
K+ +L + L + I PW++ + F G + + + I ++
Sbjct: 171 KDQQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVK 230
Query: 271 EHAQR-KLQGEGDFMDVLLSKIED--NTVMSGHTRDTVIKATALILIFTGSESTYLGIIW 327
EH + + DF+D L K+E + S T ++ ++ TA+ L G+E+T + +
Sbjct: 231 EHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIES-LENTAVDLFGAGTETTSTTLRY 289
Query: 328 TLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIR 387
L LLL HP+ K QEE++ +GR+R D ++ Y A+V E R P +
Sbjct: 290 ALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPH 349
Query: 388 EAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEY 447
D + Y +PKGT +++++ + D + + NP F P FL + + +
Sbjct: 350 AVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY---F 406
Query: 448 IPFSFGRRSCPGMT-SGLQIVQLTLARILQGFDLATV 483
+PFS G+R C G +G+++ L L ILQ F+L ++
Sbjct: 407 MPFSAGKRICVGEALAGMELF-LFLTSILQNFNLKSL 442
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 192/456 (42%), Gaps = 49/456 (10%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P+IG++ L I + V K L ++ YGP+++L G +++ +E+VK+ +
Sbjct: 20 PVIGNI-LQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFS 78
Query: 106 TRP--SIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTF 163
R +A G+ VF+ G+ W++IR+ + L++ + K V
Sbjct: 79 GRGHFPLAERANRGF-GIVFS---NGKRWKEIRRFS---LMTLRNFGMGKRSIEDRVQEE 131
Query: 164 IKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSARE-----FGEQGSEGWR 218
+ L + +P ++ N+ +I KRF ++ E+ +E R
Sbjct: 132 ARCLVEELRKTKASPCDPTF--ILGCAPCNVICSIIFQKRFDYKDQQFLNLMEKLNENIR 189
Query: 219 INRAIKEATYLTGVFVLGDAIPWLEWID--------FQG-HIGSMRRTAKKIDDVIGNWL 269
I + PW++ + F G H ++ A D++
Sbjct: 190 IV-----------------STPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDILEKVK 232
Query: 270 EEHAQRKLQGEGDFMDVLLSKIED--NTVMSGHTRDTVIKATALILIFTGSESTYLGIIW 327
E + DF+D L K+E S T + ++ TA L+ G+E+T + +
Sbjct: 233 EHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLV-ITAADLLGAGTETTSTTLRY 291
Query: 328 TLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIR 387
L LLL HP+ K QEE++ VGR+R D ++ Y A+V E R P +
Sbjct: 292 ALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPH 351
Query: 388 EAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEY 447
D + Y +PKGT ++ ++ + D + + NP F P FL + + +
Sbjct: 352 AVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY---F 408
Query: 448 IPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATV 483
+PFS G+R C G + L L ILQ F+L ++
Sbjct: 409 MPFSAGKRICVGEGLARMELFLFLTFILQNFNLKSL 444
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 273 AQRKLQGE--GDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLS 330
A+R+ G+ D + LL +DN G I + ++ GSE+ I+W L
Sbjct: 232 AERRASGQKPDDLLTALLEAKDDNGDPIGEQE---IHDQVVAILTPGSETIASTIMWLLQ 288
Query: 331 LLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAM 390
L +HP+ + ++E++ G R V D++ L++ ++ E +R+ P V R A+
Sbjct: 289 ALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVL-TRRAV 346
Query: 391 EDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPF 450
+ E+GGY +P G +I + + + RDP+ +++ EF P+R+L A N + PF
Sbjct: 347 AESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERA---ANVPKYAMKPF 403
Query: 451 SFGRRSCPGMTSGLQIVQLTL 471
S G+R CP + + QLTL
Sbjct: 404 SAGKRKCP--SDHFSMAQLTL 422
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 193/455 (42%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 9 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 64
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ P + L D +F + + W+ I LL S + +K
Sbjct: 65 ESRFDKNLSQAPKFV--RDLAGD-GLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 117
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 118 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 175
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M +D +I A RK
Sbjct: 176 TSMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDL---VDKII-------ADRK 225
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 226 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKN 284
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P EL+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 285 PHELQKAAEEA-ARVLVDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 342
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 397
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 398 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 188/453 (41%), Gaps = 32/453 (7%)
Query: 45 WPLIGHLPLLIAEEPVCKILGAIAD---KYGPIYSLRLGKHPTLIVSSWEIVKDCFTTND 101
WPL+G L + + + K +A+ KYG I+ ++LG ++ + S +++ + T
Sbjct: 32 WPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTES 91
Query: 102 ---RVLATRPSIAAGKYLGYDNAVFALAPY-GRYWRDIRKIATTDLLSSHRLELLKHVRY 157
+ L +P A Y + N + L G+ W+ +R L+ + L
Sbjct: 92 AHPQRLEIKPWKA---YRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKIN 148
Query: 158 SEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGW 217
+ F++ + C E P + + + +F ++ KRF + E E
Sbjct: 149 EVLADFLERMDELCDERGRIPD---LYSELNKWSFESICLVLYEKRFGLLQ-KETEEEAL 204
Query: 218 RINRAIKEATYLTGVFVLG--DAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQR 275
AIK G ++ + L +Q H + K + I N L+ ++Q
Sbjct: 205 TFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQ- 263
Query: 276 KLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
Q DF+ + H + A L E+T ++W L L +
Sbjct: 264 --QPGADFLC--------DIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRN 313
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P+ ++ +E+ + ++ D++N+ YL+A +KE++R+ P P T R + +
Sbjct: 314 PQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFT-TRTLDKPTVL 372
Query: 396 GGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRR 455
G Y +PKGT L +N L +E+ +FRPER+L ++ F ++PF G+R
Sbjct: 373 GEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINP----FAHLPFGIGKR 428
Query: 456 SCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
C G + L L I+Q +D+ P+
Sbjct: 429 MCIGRRLAELQLHLALCWIIQKYDIVATDNEPV 461
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 191/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ P + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQAPKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P EL+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHELQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 177/424 (41%), Gaps = 32/424 (7%)
Query: 69 DKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLATRPSIAAGK--YLGYDNAVFALA 126
+KYG ++++ LG P +++ E +++ + R IA + GY +FA
Sbjct: 41 EKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGY-GVIFA-- 97
Query: 127 PYGRYWRDIRKIATTDL--LSSHRLELLKHVRYSEVDTFIKDLYSRCSENAF-NPAKVVI 183
G W+ +R+ + T + + + + ++ E I++L R S+ A +P
Sbjct: 98 -NGNRWKVLRRFSVTTMRDFGMGKRSVEERIQ-EEAQCLIEEL--RKSKGALMDP----- 148
Query: 184 SKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWR-INRAIKEATYLTGVFVLGDAIPWL 242
+ L + +T NI ++ GKRF Q E + +N + + ++ VF G
Sbjct: 149 TFLFQSITANIICSIVFGKRFHY-----QDQEFLKMLNLFYQTFSLISSVF--GQLFELF 201
Query: 243 EWI--DFQGHIGSMRRTAKKIDDVIGNWLEEHAQR-KLQGEGDFMDVLLSKIE-DNTVMS 298
F G + + ++I+ IG+ +E+H + D +D L +E + +
Sbjct: 202 SGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAH 261
Query: 299 GHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNE 358
+ L L F G+E+T + + L+L +P ++ E++ +G R
Sbjct: 262 SEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPEL 321
Query: 359 SDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPR 418
D + Y A++ E R P+ + GY +PK T + + + DP
Sbjct: 322 HDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPH 381
Query: 419 MWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGF 478
+E P F P+ FL + + +IPFS G+R C G + L ILQ F
Sbjct: 382 YFEKPDAFNPDHFLDANGALKKTEA---FIPFSLGKRICLGEGIARAELFLFFTTILQNF 438
Query: 479 DLAT 482
+A+
Sbjct: 439 SMAS 442
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 192/455 (42%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 9 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 64
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 65 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 117
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 118 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 175
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M +D +I A RK
Sbjct: 176 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDL---VDKII-------ADRK 225
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 226 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 284
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 285 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 342
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 397
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+CPG L L L +L+ FD Y L
Sbjct: 398 QRACPGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 7/206 (3%)
Query: 274 QRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLL 333
Q++ E D + +LL+ +DN +K L+L+F G E T + + LLL
Sbjct: 215 QQQPPSEEDALGILLAARDDNNQPLSLPE---LKDQILLLLFAGHE-TLTSALSSFCLLL 270
Query: 334 NHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDC 393
++++ + + + + +K + YL +++E LR+ PP G RE ++DC
Sbjct: 271 GQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPV-GGGFRELIQDC 329
Query: 394 EIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
+ G+H PKG + I + H DP ++ +P +F PERF T + F ++PF G
Sbjct: 330 QFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERF--TPDGSATHNPPFAHVPFGGG 387
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFD 479
R C G ++L R++Q FD
Sbjct: 388 LRECLGKEFARLEMKLFATRLIQQFD 413
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 9/234 (3%)
Query: 250 HIGSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKAT 309
+ +R + + + V +W++ + +GE D+L ++ G D +
Sbjct: 191 QLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAE---EGAQDDEGLLDN 247
Query: 310 ALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRA 369
+ G E++ + +T+ L P+ + + Q E+D +G R+++ D+ L+YL
Sbjct: 248 FVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQ 307
Query: 370 IVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPE 429
++KE+LR+YPP T R E+ I G VP T L+ + + + R +E+P F P+
Sbjct: 308 VLKESLRLYPPAWGT-FRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPD 366
Query: 430 RFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATV 483
RF F Y PFS G RSC G V++ +A++LQ + V
Sbjct: 367 RF-----GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLV 415
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 192/457 (42%), Gaps = 40/457 (8%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLG--YDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKH 154
+ D+ L+ A K++ + + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQ-----ALKFVRDFFGDGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKG 114
Query: 155 VRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGS 214
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 115 YHAMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHP 172
Query: 215 EGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQ 274
+ RA+ EA D FQ I M KI A
Sbjct: 173 FITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IAD 222
Query: 275 RKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLL 333
RK GE D+L + +G D I+ + + G E+T + + L L+
Sbjct: 223 RKASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 334 NHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDC 393
+P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED
Sbjct: 282 KNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDT 339
Query: 394 EIGG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFS 451
+GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF
Sbjct: 340 VLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFG 394
Query: 452 FGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
G+R+C G L L L +L+ FD Y L
Sbjct: 395 NGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 190/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P GP + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 190/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 9 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 64
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 65 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 117
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 118 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 175
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 176 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 225
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 226 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKN 284
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P GP + A ED +
Sbjct: 285 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLY-AKEDTVL 342
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 397
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 398 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACEGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSL 331
A RK GE D+L + +G D I+ + + G EST + + L
Sbjct: 221 ADRKASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYF 279
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ +P L+KA EE V D + +K LKY+ ++ E LR++P P + A E
Sbjct: 280 LVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKE 337
Query: 392 DCEIGG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIP 449
D +GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKP 392
Query: 450 FSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
F G+R+C G L L L +L+ FD Y L
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 192/455 (42%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 14 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 69
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 70 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 122
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 123 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 180
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M +D +I A RK
Sbjct: 181 TSMVRALDEAMNKLQRTNPDDPAYDENKRQFQEDIKVMNDL---VDKII-------ADRK 230
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + +TL L+ +
Sbjct: 231 ASGEQS-DDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKN 289
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 290 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 347
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG ++V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 348 GGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 402
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 403 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 437
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSL 331
A RK GE D+L + +G D I+ + + G E+T + + L
Sbjct: 222 ADRKASGEQS-DDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYF 280
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ +P L+KA EE V D + +K LKY+ ++ E LRI+P P + A E
Sbjct: 281 LVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLY-AKE 338
Query: 392 DCEIGG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIP 449
D +GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P
Sbjct: 339 DTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA----IPQH-AFKP 393
Query: 450 FSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
F G+R+C G L L L +L+ FD Y L
Sbjct: 394 FGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDC 96
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS +VK+
Sbjct: 9 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYISSQRLVKEA 62
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 11 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 66
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 67 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 119
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 120 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 177
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 178 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 227
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 228 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 286
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 287 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 344
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 345 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 399
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 400 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 434
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSL 331
A RK GE D+L + +G D I+ + + G EST + + L
Sbjct: 221 ADRKASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYF 279
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ +P L+KA EE V D + +K LKY+ ++ E LR++P P + A E
Sbjct: 280 LVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKE 337
Query: 392 DCEIGG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIP 449
D +GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKP 392
Query: 450 FSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
F G+R+C G L L L +L+ FD Y L
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSL 331
A RK GE D+L + +G D I+ + + G EST + + L
Sbjct: 222 ADRKASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYF 280
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ +P L+KA EE V D + +K LKY+ ++ E LR++P P + A E
Sbjct: 281 LVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKE 338
Query: 392 DCEIGG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIP 449
D +GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P
Sbjct: 339 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKP 393
Query: 450 FSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
F G+R+C G L L L +L+ FD Y L
Sbjct: 394 FGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 11 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 66
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 67 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 119
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 120 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 177
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 178 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 227
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 228 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 286
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 287 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLY-AKEDTVL 344
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 345 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 399
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 400 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 434
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 9 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 64
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 65 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 117
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 118 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 175
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 176 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 225
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 226 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 284
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 285 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 342
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 397
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 398 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 191/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M +D +I A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDL---VDKII-------ADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGKQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 191/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 9 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 64
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 65 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 117
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 118 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 175
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M +D +I A RK
Sbjct: 176 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDL---VDKII-------ADRK 225
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 226 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 284
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 285 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLY-AKEDTVL 342
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 397
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 398 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSL 331
A RK GE D+L + +G D I+ + + G E+T + + L
Sbjct: 222 ADRKASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 280
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ +P L+KA EE V D + +K LKY+ ++ E LR++P P + A E
Sbjct: 281 LVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKE 338
Query: 392 DCEIGG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIP 449
D +GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P
Sbjct: 339 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKP 393
Query: 450 FSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
F G+R+C G L L L +L+ FD Y L
Sbjct: 394 FGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSL 331
A RK GE D+L + +G D I+ + + G E+T + + L
Sbjct: 221 ADRKASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ +P L+KA EE V D + +K LKY+ ++ E LR++P P + A E
Sbjct: 280 LVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKE 337
Query: 392 DCEIGG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIP 449
D +GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKP 392
Query: 450 FSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
F G+R+C G L L L +L+ FD Y L
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSL 331
A RK GE D+L + +G D I+ + + G E+T + + L
Sbjct: 221 ADRKASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYF 279
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ +P L+KA EE V D + +K LKY+ ++ E LR++P P + A E
Sbjct: 280 LVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKE 337
Query: 392 DCEIGG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIP 449
D +GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKP 392
Query: 450 FSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
F G+R+C G L L L +L+ FD Y L
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P+ G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPYGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSL 331
A RK GE D+L + +G D I+ + + G E+T + + L
Sbjct: 221 ADRKASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 332 LLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME 391
L+ +P L+KA EE V D + +K LKY+ ++ E LR++P P + A E
Sbjct: 280 LVKNPHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKE 337
Query: 392 DCEIGG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIP 449
D +GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P
Sbjct: 338 DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKP 392
Query: 450 FSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
F G+R+C G L L L +L+ FD Y L
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 11 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 66
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 67 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 119
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 120 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 177
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 178 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 227
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 228 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 286
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 287 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLY-AKEDTVL 344
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 345 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 399
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 400 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 434
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + PF G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPFGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 189/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P+ G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPWGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 188/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPHGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 191/460 (41%), Gaps = 46/460 (10%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ A + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFARD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIK--DLYSRCSENAFNPAKVVISKLIEQLTFN-ISLRLIAGKRFSAREFGEQG 213
VD ++ + R + + + + + + + +LT + I L G + F
Sbjct: 117 AMMVDIAVQLVQKWERLNADEY----IEVPEDMTRLTLDTIGL---CGFNYRFNSFYRDQ 169
Query: 214 SEGWRIN--RAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEE 271
+ I+ RA+ E D FQ I M KI
Sbjct: 170 PHPFIISMIRALDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI---------- 219
Query: 272 HAQRKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLS 330
A RK GE D+L + +G D I + + G E+T + + L
Sbjct: 220 IADRKASGEQS-DDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALY 278
Query: 331 LLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAM 390
L+ +P L+K EE V D + +K LKY+ ++ E LR++P P + A
Sbjct: 279 FLVKNPHVLQKVAEEA-TRVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AK 336
Query: 391 EDCEIGG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYI 448
ED +GG Y + KG ++V I +LHRD +W ++ EFRPERF A QH +
Sbjct: 337 EDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFK 391
Query: 449 PFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
PF G+R+C G L L L +L+ FD Y L
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 188/455 (41%), Gaps = 36/455 (7%)
Query: 39 PEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFT 98
P+ FG + +LPLL ++PV + L IAD+ G I+ T +SS ++K+
Sbjct: 8 PKTFGE---LKNLPLLNTDKPV-QALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63
Query: 99 TN--DRVLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVR 156
+ D+ L+ + G + +F + + W+ I LL S + +K
Sbjct: 64 ESRFDKNLSQALKFVRD-FAG--DGLFTSWTHEKNWKKAHNI----LLPSFSQQAMKGYH 116
Query: 157 YSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEG 216
VD ++ + NA + + + + +LT + RF++ +
Sbjct: 117 AMMVDIAVQLVQKWERLNA--DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFI 174
Query: 217 WRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRK 276
+ RA+ EA D FQ I M KI A RK
Sbjct: 175 TSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKI----------IADRK 224
Query: 277 LQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGIIWTLSLLLNH 335
GE D+L + +G D I+ + + G E+T + + L L+ +
Sbjct: 225 ASGEQS-DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 283
Query: 336 PKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI 395
P L+KA EE V D + +K LKY+ ++ E LR++P P + A ED +
Sbjct: 284 PHVLQKAAEEA-ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLY-AKEDTVL 341
Query: 396 GG-YHVPKGTRLIVNIWKLHRDPRMW-ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
GG Y + KG L+V I +LHRD +W ++ EFRPERF A QH + P G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA----IPQH-AFKPAGNG 396
Query: 454 RRSCPGMTSGLQIVQLTLARILQGFDLATVGVYPL 488
+R+C G L L L +L+ FD Y L
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 187/453 (41%), Gaps = 45/453 (9%)
Query: 43 GAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDR 102
G P +GH+ + ++P+ +L A KYG I+++ + + +V FT +
Sbjct: 10 GTTPFVGHI-IQFGKDPLGFMLKA-KKKYGGIFTMNICGNRITVVGDVHQHSKFFTPRNE 67
Query: 103 VLATRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDT 162
+L+ R + + + V APY R + +A + L+ + + EV
Sbjct: 68 ILSPR-EVYSFMVPVFGEGVAYAAPYPRMREQLNFLA--EELTVAKFQNFAPSIQHEVRK 124
Query: 163 FIKDLYSRCSE--NAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRIN 220
F+K +++ N + +I Q F LR KR AR+F + +
Sbjct: 125 FMKANWNKDEGEINILDDCSAMIINTACQCLFGEDLR----KRLDARQFAQ-------LL 173
Query: 221 RAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWL---EEHAQRKL 277
++ VF +PW+ + R ++ D++ + E+ +K
Sbjct: 174 AKMESCLIPAAVF-----LPWILKLPLPQSY-RCRDARAELQDILSEIIIAREKEEAQKD 227
Query: 278 QGEGDFMDVLLSKI-EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLN-- 334
D + LL + D T MS H +I A +F G ++ + W+L L++
Sbjct: 228 TNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAA----MFAGQHTSTITTTWSLLHLMDPR 283
Query: 335 HPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCE 394
+ + L K +E+D + + N M+ + + +E++R PP V +R+ ++ +
Sbjct: 284 NKRHLAKLHQEIDEFPAQLNYDNV--MEEMPFAEQCARESIRRDPPL-VMLMRKVLKPVQ 340
Query: 395 IGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR 454
+G Y VP+G + + H+D + NP E+ PER ++ + F G
Sbjct: 341 VGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER--------NMKLVDGAFCGFGAGV 392
Query: 455 RSCPGMTSGLQIVQLTLARILQGFDLATVGVYP 487
C G GL V+ LA +L+ +D +G P
Sbjct: 393 HKCIGEKFGLLQVKTVLATVLRDYDFELLGPLP 425
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 20/233 (8%)
Query: 256 RTAKKIDDVIGNWLEEHAQR-----KLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATA 310
++ K + D I + E +R KL+ DF L+ + + TR+ V +
Sbjct: 246 KSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDL----TRENVNQCIL 301
Query: 311 LILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAI 370
+LI ++ + + + L L+ HP + +E+ +G +R + D++ LK +
Sbjct: 302 EMLI-AAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENF 359
Query: 371 VKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPER 430
+ E++R Y P +R+A+ED I GY V KGT +I+NI ++HR + P EF E
Sbjct: 360 IYESMR-YQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLEN 417
Query: 431 FLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATV 483
F +V ++F+ PF FG R C G + +++ L +L+ F + T+
Sbjct: 418 FAK-----NVPYRYFQ--PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTL 463
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 157/397 (39%), Gaps = 23/397 (5%)
Query: 69 DKYGPIYSLRLGKHPTLIV---SSWEIVKDCFTTNDRVLATRPSIAAGKYLGYDNAVFAL 125
+ GPI+ LG + V E ++ + + + P +A ++ G+ VF L
Sbjct: 47 QELGPIFRYNLGGPRMVCVMLPEDVEKLQQVDSLHPCRMILEPWVAYRQHRGHKCGVFLL 106
Query: 126 APYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTFIKDLYSRCSENAFNPAKVVISK 185
G WR R D+LS ++ + + F + L + +NA + +
Sbjct: 107 N--GPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQP 164
Query: 186 LIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAIKEATYLTGVFVLGDAIPWLEWI 245
I T S + G+R G S E + + V ++ WI
Sbjct: 165 SIFHYTIEASNLALFGERLGL--VGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWI 222
Query: 246 D---FQGHIGSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTR 302
++ H + + D+ I +E A + Q + LL K E +
Sbjct: 223 SPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVAELLLKAELSL------- 275
Query: 303 DTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMK 362
IKA ++ L ++T ++ TL L +P + ++E +
Sbjct: 276 -EAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATT 334
Query: 363 NLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWEN 422
L LRA +KETLR+YP G R D + YH+P GT + V ++ L R+ ++
Sbjct: 335 ELPLLRAALKETLRLYPVGLFLE-RVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPR 393
Query: 423 PCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
P + P+R+L D+ + ++F ++PF FG R C G
Sbjct: 394 PERYNPQRWL----DIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 166/419 (39%), Gaps = 29/419 (6%)
Query: 70 KYGPIYSLRLGKHPTLIVSSWEIVKDCFTT---NDRVLATRPSIAAGKYLGYDNAVFALA 126
KYGPIY +LG ++ V E V F + N P +A +Y Y + L
Sbjct: 41 KYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQY--YQRPIGVLL 98
Query: 127 PYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTFIKDLYSRCSENAFNPAKVVISKL 186
W+ R ++++ + + + F+ L+ R + IS
Sbjct: 99 KKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDD 158
Query: 187 IEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAIKEATYLTGVFVLG---DAIPWLE 243
+ + F +I G+R E E R AI + + T V +L D
Sbjct: 159 LFRFAFESITNVIFGERQGMLE-EVVNPEAQRFIDAIYQ-MFHTSVPMLNLPPDLFRLFR 216
Query: 244 WIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRD 303
++ H+ + K D N+ E Q K D+ +L + D+ MS
Sbjct: 217 TKTWKDHVAAWDVIFSKADIYTQNFYWELRQ-KGSVHHDYRGILYRLLGDSK-MSFED-- 272
Query: 304 TVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKN 363
IKA ++ G ++T + + W L + + K Q+ L V R + DM
Sbjct: 273 --IKANVTEMLAGGVDTTSMTLQWHLYEMARN----LKVQDMLRAEVLAARHQAQGDMAT 326
Query: 364 L----KYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRM 419
+ L+A +KETLR++P VT R + D + Y +P T + V I+ L R+P
Sbjct: 327 MLQLVPLLKASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTF 385
Query: 420 WENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGF 478
+ +P F P R+L+ D N +F + F +G R C G + + L +L+ F
Sbjct: 386 FFDPENFDPTRWLSK----DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 440
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 166/419 (39%), Gaps = 29/419 (6%)
Query: 70 KYGPIYSLRLGKHPTLIVSSWEIVKDCFTT---NDRVLATRPSIAAGKYLGYDNAVFALA 126
KYGPIY +LG ++ V E V F + N P +A +Y Y + L
Sbjct: 44 KYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQY--YQRPIGVLL 101
Query: 127 PYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTFIKDLYSRCSENAFNPAKVVISKL 186
W+ R ++++ + + + F+ L+ R + IS
Sbjct: 102 KKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDD 161
Query: 187 IEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAIKEATYLTGVFVLG---DAIPWLE 243
+ + F +I G+R E E R AI + + T V +L D
Sbjct: 162 LFRFAFESITNVIFGERQGMLE-EVVNPEAQRFIDAIYQ-MFHTSVPMLNLPPDLFRLFR 219
Query: 244 WIDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRD 303
++ H+ + K D N+ E Q K D+ +L + D+ MS
Sbjct: 220 TKTWKDHVAAWDVIFSKADIYTQNFYWELRQ-KGSVHHDYRGILYRLLGDSK-MSFED-- 275
Query: 304 TVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKN 363
IKA ++ G ++T + + W L + + K Q+ L V R + DM
Sbjct: 276 --IKANVTEMLAGGVDTTSMTLQWHLYEMARN----LKVQDMLRAEVLAARHQAQGDMAT 329
Query: 364 L----KYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRM 419
+ L+A +KETLR++P VT R + D + Y +P T + V I+ L R+P
Sbjct: 330 MLQLVPLLKASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTF 388
Query: 420 WENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGF 478
+ +P F P R+L+ D N +F + F +G R C G + + L +L+ F
Sbjct: 389 FFDPENFDPTRWLSK----DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 443
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 28/251 (11%)
Query: 254 MRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKA-TALI 312
M RTA + + L LQ +++ ++ N +S T D + KA T L+
Sbjct: 210 MFRTAHNAREKLAESLR---HENLQKRESISELISLRMFLNDTLS--TFDDLEKAKTHLV 264
Query: 313 LIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHV----------GRDRWVNESDMK 362
+++ +T W+L ++ +P+ +K A EE+ + G ++++++
Sbjct: 265 VLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELN 324
Query: 363 NLKYLRAIVKETLRIYPPGPVTGIREAMED----CEIGGYHVPKGTRLIVNIWKLHRDPR 418
+L L +I+KE+LR+ IR A ED E G Y++ K + + +H DP
Sbjct: 325 DLPVLDSIIKESLRL--SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPE 382
Query: 419 MWENPCEFRPERFLTTHADVDVN------TQHFEYIPFSFGRRSCPGMTSGLQIVQLTLA 472
++ +P F+ +R+L + + Y+PF G CPG + ++ L
Sbjct: 383 IYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLI 442
Query: 473 RILQGFDLATV 483
+L F+L +
Sbjct: 443 LMLSYFELELI 453
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 28/251 (11%)
Query: 254 MRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKA-TALI 312
M RTA + + L LQ +++ ++ N +S T D + KA T L+
Sbjct: 210 MFRTAHNAREKLAESLR---HENLQKRESISELISLRMFLNDTLS--TFDDLEKAKTHLV 264
Query: 313 LIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHV----------GRDRWVNESDMK 362
+++ +T W+L ++ +P+ +K A EE+ + G ++++++
Sbjct: 265 VLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELN 324
Query: 363 NLKYLRAIVKETLRIYPPGPVTGIREAMED----CEIGGYHVPKGTRLIVNIWKLHRDPR 418
+L L +I+KE+LR+ IR A ED E G Y++ K + + +H DP
Sbjct: 325 DLPVLDSIIKESLRL--SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPE 382
Query: 419 MWENPCEFRPERFLTTHADVDVN------TQHFEYIPFSFGRRSCPGMTSGLQIVQLTLA 472
++ +P F+ +R+L + + Y+PF G CPG + ++ L
Sbjct: 383 IYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLI 442
Query: 473 RILQGFDLATV 483
+L F+L +
Sbjct: 443 LMLSYFELELI 453
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 282 DFMDVLLS-KIEDNTVMSGHTRDTVIKATALI--LIFTGSESTYLGIIWTLSLLLNHPKE 338
D +DVL++ K E +G R + + T + ++F G ++ WTL L+ H
Sbjct: 224 DMLDVLIAVKAE-----TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 339 LKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGY 398
+ELD G R V+ ++ + L ++KETLR++PP + +R A + E+ G+
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGH 337
Query: 399 HVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCP 458
+ +G + + +R P + +P +F P R+ + +N + +IPF GR C
Sbjct: 338 RIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR--WTWIPFGAGRHRCV 395
Query: 459 GMTSGLQIVQLTLARILQGFDL 480
G + ++ + +L+ ++
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEF 417
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 278 QGEGDFMDVLLS-KIEDNTVMSGHTRDTVIKATALI--LIFTGSESTYLGIIWTLSLLLN 334
+ + D +DVL++ K E +G R + + T + ++F G ++ WTL L+
Sbjct: 220 KSDRDMLDVLIAVKAE-----TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMR 274
Query: 335 HPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCE 394
H +ELD G R V+ ++ + L ++KETLR++PP + +R A + E
Sbjct: 275 HRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILMRVAKGEFE 333
Query: 395 IGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR 454
+ G+ + +G + + +R P + +P +F P R+ + +N + +IPF GR
Sbjct: 334 VQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR--WTWIPFGAGR 391
Query: 455 RSCPGMTSGLQIVQLTLARILQGFDL 480
C G + ++ + +L+ ++
Sbjct: 392 HRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 282 DFMDVLLS-KIEDNTVMSGHTRDTVIKATALI--LIFTGSESTYLGIIWTLSLLLNHPKE 338
D +DVL++ K E +G R + + T + ++F G ++ WTL L+ H
Sbjct: 224 DMLDVLIAVKAE-----TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 339 LKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGY 398
+ELD G R V+ ++ + L ++KETLR++PP + +R A + E+ G+
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGH 337
Query: 399 HVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCP 458
+ +G + + +R P + +P +F P R+ + +N + +IPF GR C
Sbjct: 338 RIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR--WTWIPFGAGRHRCV 395
Query: 459 GMTSGLQIVQLTLARILQGFDL 480
G + ++ + +L+ ++
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEF 417
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 282 DFMDVLLS-KIEDNTVMSGHTRDTVIKATALI--LIFTGSESTYLGIIWTLSLLLNHPKE 338
D +DVL++ K E +G R + + T + ++F G ++ WTL L+ H
Sbjct: 224 DMLDVLIAVKAE-----TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 339 LKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGY 398
+ELD G R V+ ++ + L ++KETLR++PP + +R A + E+ G+
Sbjct: 279 YAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGH 337
Query: 399 HVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCP 458
+ +G + + +R P + +P +F P R+ + +N + +IPF GR C
Sbjct: 338 RIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR--WTWIPFGAGRHRCV 395
Query: 459 GMTSGLQIVQLTLARILQGFDL 480
G + ++ + +L+ ++
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEF 417
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 181/463 (39%), Gaps = 54/463 (11%)
Query: 37 TAPEPFGAWPLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRL-GKHPTLIVSSWEIVKD 95
+ P F P +GH + + P+ + L +KYGP++S + GK T ++ S +
Sbjct: 12 SPPYIFSPIPFLGHA-IAFGKSPI-EFLENAYEKYGPVFSFTMVGKTFTYLLGS-DAAAL 68
Query: 96 CFTTNDR------VLATRPSIAAGKYLGYD--NAVFALAPYGRYWRDIRKIATTDLLSSH 147
F + + V + + GK + YD N VF + +K+ + L +H
Sbjct: 69 LFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFL---------EQKKMLKSGLNIAH 119
Query: 148 RLELLKHVRYSEVDTFIKDLYSRCSENAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAR 207
+HV E +T K+ + E+ +S+LI L A +
Sbjct: 120 ---FKQHVSIIEKET--KEYFESWGESGEKNVFEALSELI---------ILTASHCLHGK 165
Query: 208 EFGEQGSEGWRINRAIKEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGN 267
E Q +E A + + ++L WL F+ R ++I D+
Sbjct: 166 EIRSQLNEKVAQLYADLDGGFSHAAWLLPG---WLPLPSFR----RRDRAHREIKDIFYK 218
Query: 268 WLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHT-RDTVIKATALILIFTGSESTYLGII 326
+++ Q + + +D +L + D T G D + + L+ G ++
Sbjct: 219 AIQKRRQSQEK-----IDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSA 273
Query: 327 WTLSLLLNHPKELKKAQEELDVHVGRD-RWVNESDMKNLKYLRAIVKETLRIYPPGPVTG 385
W L KK E G + + +K+L L +KETLR+ PP +
Sbjct: 274 WMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIM- 332
Query: 386 IREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHF 445
+R A + GY +P G ++ V+ R W +F P+R+L D + + F
Sbjct: 333 MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL---QDNPASGEKF 389
Query: 446 EYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATV-GVYP 487
Y+PF GR C G ++ + +L+ ++ + G +P
Sbjct: 390 AYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFP 432
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 306 IKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKA---QEELDVHVGRDRWVNESDMK 362
+KA ++ G +T + + W H E+ ++ QE L V R E D+
Sbjct: 277 VKANITEMLAGGVNTTSMTLQW-------HLYEMARSLNVQEMLREEVLNARRQAEGDIS 329
Query: 363 NL----KYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPR 418
+ L+A +KETLR++P VT R D + Y +P T + V I+ + RDP
Sbjct: 330 KMLQMVPLLKASIKETLRLHPIS-VTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPA 388
Query: 419 MWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGF 478
+ +P +F P R+L+ D+ HF + F +G R C G + L L IL+ F
Sbjct: 389 FFSSPDKFDPTRWLSKDKDL----IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENF 444
Query: 479 DL 480
+
Sbjct: 445 KV 446
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 171/444 (38%), Gaps = 47/444 (10%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P +GH+ + + P+ + D ++++ +G IV F+ + +L+
Sbjct: 17 PFLGHI-VQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILS 75
Query: 106 TRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTFIK 165
R + + +A APY R + +A + L+ + + EV F+
Sbjct: 76 PREVYTIMTPVFGEGVAYA-APYPRMREQLNFLA--EELTIAKFQNFVPAIQHEVRKFMA 132
Query: 166 DLYSRCSE--NAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ + N +I Q F LR KR +AR F + S+ +
Sbjct: 133 ENWKEDEGVINLLEDCGAMIINTACQCLFGEDLR----KRLNARHFAQLLSK-------M 181
Query: 224 KEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWL---EEHAQRKLQGE 280
+ + VF +PWL + R ++ ++G + E+ K
Sbjct: 182 ESSLIPAAVF-----MPWLLRLPLP-QSARCREARAELQKILGEIIVAREKEEASKDNNT 235
Query: 281 GDFMDVLLSKI-EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKE- 338
D + LL + D T MS H +I A +F G ++ + W++ L L HPK
Sbjct: 236 SDLLGGLLKAVYRDGTRMSLHEVCGMIVAA----MFAGQHTSTITTSWSM-LHLMHPKNK 290
Query: 339 --LKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIG 396
L K +E+D + + N D + + V+E++R PP + +R + ++G
Sbjct: 291 KWLDKLHKEIDEFPAQLNYDNVMD--EMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVG 347
Query: 397 GYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRS 456
Y VPKG + + H D + NP + PER D V+ +I F G
Sbjct: 348 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKVDGA---FIGFGAGVHK 398
Query: 457 CPGMTSGLQIVQLTLARILQGFDL 480
C G L V+ LA + +D
Sbjct: 399 CIGQKFALLQVKTILATAFREYDF 422
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 171/444 (38%), Gaps = 47/444 (10%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P +GH+ + + P+ + D ++++ +G IV F+ + +L+
Sbjct: 11 PFLGHI-VQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILS 69
Query: 106 TRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTFIK 165
R + + +A APY R + +A + L+ + + EV F+
Sbjct: 70 PREVYTIMTPVFGEGVAYA-APYPRMREQLNFLA--EELTIAKFQNFVPAIQHEVRKFMA 126
Query: 166 DLYSRCSE--NAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ + N +I Q F LR KR +AR F + S+ +
Sbjct: 127 ENWKEDEGVINLLEDCGAMIINTACQCLFGEDLR----KRLNARHFAQLLSK-------M 175
Query: 224 KEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWL---EEHAQRKLQGE 280
+ + VF +PWL + R ++ ++G + E+ K
Sbjct: 176 ESSLIPAAVF-----MPWLLRLPLP-QSARCREARAELQKILGEIIVAREKEEASKDNNT 229
Query: 281 GDFMDVLLSKI-EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKE- 338
D + LL + D T MS H +I A +F G ++ + W++ L L HPK
Sbjct: 230 SDLLGGLLKAVYRDGTRMSLHEVCGMIVAA----MFAGQHTSTITTSWSM-LHLMHPKNK 284
Query: 339 --LKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIG 396
L K +E+D + + N D + + V+E++R PP + +R + ++G
Sbjct: 285 KWLDKLHKEIDEFPAQLNYDNVMD--EMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVG 341
Query: 397 GYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRS 456
Y VPKG + + H D + NP + PER D V+ +I F G
Sbjct: 342 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKVDGA---FIGFGAGVHK 392
Query: 457 CPGMTSGLQIVQLTLARILQGFDL 480
C G L V+ LA + +D
Sbjct: 393 CIGQKFALLQVKTILATAFREYDF 416
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 171/444 (38%), Gaps = 47/444 (10%)
Query: 46 PLIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRVLA 105
P +GH+ + + P+ + D ++++ +G IV F+ + +L+
Sbjct: 26 PFLGHI-VQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILS 84
Query: 106 TRPSIAAGKYLGYDNAVFALAPYGRYWRDIRKIATTDLLSSHRLELLKHVRYSEVDTFIK 165
R + + +A APY R + +A + L+ + + EV F+
Sbjct: 85 PREVYTIMTPVFGEGVAYA-APYPRMREQLNFLA--EELTIAKFQNFVPAIQHEVRKFMA 141
Query: 166 DLYSRCSE--NAFNPAKVVISKLIEQLTFNISLRLIAGKRFSAREFGEQGSEGWRINRAI 223
+ + N +I Q F LR KR +AR F + S+ +
Sbjct: 142 ENWKEDEGVINLLEDCGAMIINTACQCLFGEDLR----KRLNARHFAQLLSK-------M 190
Query: 224 KEATYLTGVFVLGDAIPWLEWIDFQGHIGSMRRTAKKIDDVIGNWL---EEHAQRKLQGE 280
+ + VF +PWL + R ++ ++G + E+ K
Sbjct: 191 ESSLIPAAVF-----MPWLLRLPLP-QSARCREARAELQKILGEIIVAREKEEASKDNNT 244
Query: 281 GDFMDVLLSKI-EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKE- 338
D + LL + D T MS H +I A +F G ++ + W++ L L HPK
Sbjct: 245 SDLLGGLLKAVYRDGTRMSLHEVCGMIVAA----MFAGQHTSTITTSWSM-LHLMHPKNK 299
Query: 339 --LKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIG 396
L K +E+D + + N D + + V+E++R PP + +R + ++G
Sbjct: 300 KWLDKLHKEIDEFPAQLNYDNVMD--EMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVG 356
Query: 397 GYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRS 456
Y VPKG + + H D + NP + PER D V+ +I F G
Sbjct: 357 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKVDGA---FIGFGAGVHK 407
Query: 457 CPGMTSGLQIVQLTLARILQGFDL 480
C G L V+ LA + +D
Sbjct: 408 CIGQKFALLQVKTILATAFREYDF 431
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 273 AQRKLQGEGDFMDVLLSKI-EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSL 331
A K D + LLS + D T MS H +I A +F G ++ + W++ L
Sbjct: 237 AVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MFAGQHTSSITTTWSM-L 291
Query: 332 LLNHP---KELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIRE 388
L HP K L+ ++E++ + + N M + + +E++R PP + +R+
Sbjct: 292 HLMHPANVKHLEALRKEIEEFPAQLNYNNV--MDEMPFAERCARESIRRDPPL-LMLMRK 348
Query: 389 AMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYI 448
M D ++G Y VPKG + + H D + P + PER D V +I
Sbjct: 349 VMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA---FI 399
Query: 449 PFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
F G C G GL V+ LA + +D
Sbjct: 400 GFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 270 EEHAQRKLQGEGDFMDVLLSKI-EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWT 328
+E K D + LLS + D T MS H +I A +F G ++ + W+
Sbjct: 220 KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MFAGQHTSSITTTWS 275
Query: 329 LSLLLNHP---KELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTG 385
+ L L HP K L+ ++E++ + + N M + + +E++R PP +
Sbjct: 276 M-LHLMHPANVKHLEALRKEIEEFPAQLNYNNV--MDEMPFAERCARESIRRDPPL-LML 331
Query: 386 IREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHF 445
+R+ M D ++G Y VPKG + + H D + P + PER D V
Sbjct: 332 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA-- 383
Query: 446 EYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
+I F G C G GL V+ LA + +D
Sbjct: 384 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 417
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 270 EEHAQRKLQGEGDFMDVLLSKI-EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWT 328
+E K D + LLS + D T MS H +I A +F G ++ + W+
Sbjct: 221 KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MFAGQHTSSITTTWS 276
Query: 329 LSLLLNHP---KELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTG 385
+ L L HP K L+ ++E++ + + N M + + +E++R PP +
Sbjct: 277 M-LHLMHPANVKHLEALRKEIEEFPAQLNYNNV--MDEMPFAERCARESIRRDPPL-LML 332
Query: 386 IREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHF 445
+R+ M D ++G Y VPKG + + H D + P + PER D V
Sbjct: 333 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA-- 384
Query: 446 EYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
+I F G C G GL V+ LA + +D
Sbjct: 385 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 270 EEHAQRKLQGEGDFMDVLLSKI-EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWT 328
+E K D + LLS + D T MS H +I A +F G ++ + W+
Sbjct: 234 KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MFAGQHTSSITTTWS 289
Query: 329 LSLLLNHP---KELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTG 385
+ L L HP K L+ ++E++ + + N M + + +E++R PP +
Sbjct: 290 M-LHLMHPANVKHLEALRKEIEEFPAQLNYNNV--MDEMPFAERCARESIRRDPPL-LML 345
Query: 386 IREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHF 445
+R+ M D ++G Y VPKG + + H D + P + PER D V
Sbjct: 346 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA-- 397
Query: 446 EYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
+I F G C G GL V+ LA + +D
Sbjct: 398 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 270 EEHAQRKLQGEGDFMDVLLSKI-EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWT 328
+E K D + LLS + D T MS H +I A +F G ++ + W+
Sbjct: 222 KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MFAGQHTSSITTTWS 277
Query: 329 LSLLLNHP---KELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTG 385
+ L L HP K L+ ++E++ + + N M + + +E++R PP +
Sbjct: 278 M-LHLMHPANVKHLEALRKEIEEFPAQLNYNNV--MDEMPFAERCARESIRRDPPL-LML 333
Query: 386 IREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHF 445
+R+ M D ++G Y VPKG + + H D + P + PER D V
Sbjct: 334 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA-- 385
Query: 446 EYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
+I F G C G GL V+ LA + +D
Sbjct: 386 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 419
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 270 EEHAQRKLQGEGDFMDVLLSKI-EDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWT 328
+E K D + LLS + D T MS H +I A +F G ++ + W+
Sbjct: 221 KEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA----MFAGQHTSSITTTWS 276
Query: 329 LSLLLNHP---KELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTG 385
+ L L HP K L+ ++E++ + + N M + + +E++R PP +
Sbjct: 277 M-LHLMHPANVKHLEALRKEIEEFPAQLNYNNV--MDEMPFAERCARESIRRDPPL-LML 332
Query: 386 IREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHF 445
+R+ M D ++G Y VPKG + + H D + P + PER D V
Sbjct: 333 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA-- 384
Query: 446 EYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
+I F G C G GL V+ LA + +D
Sbjct: 385 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 28/188 (14%)
Query: 288 LSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELD 347
L ++ +T G D+ + A LI + + ++++ L HPK
Sbjct: 214 LHEMAFHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPK---------- 263
Query: 348 VHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLI 407
W+ N + V+E R YP GP G +D KGT ++
Sbjct: 264 ----YKEWLRSG---NSREREMFVQEVRRYYPFGPFLGAL-VKKDFVWNNCEFKKGTSVL 315
Query: 408 VNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR----RSCPGMTSG 463
++++ + DPR+W++P EFRPERF ++ F+ IP G CPG
Sbjct: 316 LDLYGTNHDPRLWDHPDEFRPERFAEREENL------FDMIPQGGGHAEKGHRCPGEGIT 369
Query: 464 LQIVQLTL 471
+++++ +L
Sbjct: 370 IEVMKASL 377
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 86/220 (39%), Gaps = 36/220 (16%)
Query: 265 IGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLG 324
+G L + Q + GD + L ED G D + A L+ ++T
Sbjct: 189 LGGLLYQLVQERRANPGDDLISALITTEDP---DGVVDDMFLMNAAGTLLIAAHDTTACM 245
Query: 325 IIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVT 384
I +LLL+ P +L +E+ + VG V+E LR G
Sbjct: 246 IGLGTALLLDSPDQLALLREDPSL-VGN-----------------AVEELLRYLTIGQFG 287
Query: 385 GIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQH 444
G R A D E+GG + KG +++ ++ DP E PERF D+ +
Sbjct: 288 GERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEE-----PERF-------DITRRP 335
Query: 445 FEYIPFSFGRRSCPGMTSG---LQIVQLTLARILQGFDLA 481
++ F FG C G LQIV TL R L G LA
Sbjct: 336 APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLA 375
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 86/220 (39%), Gaps = 36/220 (16%)
Query: 265 IGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLG 324
+G L + Q + GD + L ED G D + A L+ ++T
Sbjct: 189 LGGLLYQLVQERRANPGDDLISALITTEDP---DGVVDDMFLMNAAGTLLIAAHDTTACM 245
Query: 325 IIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVT 384
I +LLL+ P +L +E+ + VG V+E LR G
Sbjct: 246 IGLGTALLLDSPDQLALLREDPSL-VGN-----------------AVEELLRYLTIGQFG 287
Query: 385 GIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQH 444
G R A D E+GG + KG +++ ++ DP E PERF D+ +
Sbjct: 288 GERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEE-----PERF-------DITRRP 335
Query: 445 FEYIPFSFGRRSCPGMTSG---LQIVQLTLARILQGFDLA 481
++ F FG C G LQIV TL R L G LA
Sbjct: 336 APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLA 375
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 86/220 (39%), Gaps = 36/220 (16%)
Query: 265 IGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLG 324
+G L + Q + GD + L ED G D + A L+ ++T
Sbjct: 189 LGGLLYQLVQERRANPGDDLISALITTEDP---DGVVDDMFLMNAAGTLLIAAHDTTACM 245
Query: 325 IIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVT 384
I +LLL+ P +L +E+ + VG V+E LR G
Sbjct: 246 IGLGTALLLDSPDQLALLREDPSL-VGN-----------------AVEELLRYLTIGQFG 287
Query: 385 GIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQH 444
G R A D E+GG + KG +++ ++ DP E PERF D+ +
Sbjct: 288 GERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEE-----PERF-------DITRRP 335
Query: 445 FEYIPFSFGRRSCPGMTSG---LQIVQLTLARILQGFDLA 481
++ F FG C G LQIV TL R L G LA
Sbjct: 336 APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLA 375
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 361 MKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW 420
++ Y V+E R YP GP + A +D E G P+G +++++++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAV-VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 421 ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR----RSCPGMTSGLQIVQLT 470
+P EFRPERF D F +IP G CPG L I+++
Sbjct: 327 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 374
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 267 NWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGII 326
N++ + +R+ GD + L +++D+ G + + AL+L+ G ES+ I
Sbjct: 193 NFILDLVERRRTEPGDDLLSALIRVQDDD--DGRLSADELTSIALVLLLAGFESSVSLIG 250
Query: 327 WTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI 386
LLL HP +L + ++ L V+E LR P P T
Sbjct: 251 IGTYLLLTHPDQLALVR------------------RDPSALPNAVEEILRYIAP-PETTT 291
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEF 426
R A E+ EIGG +P+ + ++V +RDP+ + +P F
Sbjct: 292 RFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 331
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 267 NWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGII 326
N++ + +R+ GD + L +++D+ G + + AL+L+ G ES+ I
Sbjct: 194 NFILDLVERRRTEPGDDLLSALIRVQDDD--DGRLSADELTSIALVLLLAGFESSVSLIG 251
Query: 327 WTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI 386
LLL HP +L + ++ L V+E LR P P T
Sbjct: 252 IGTYLLLTHPDQLALVR------------------RDPSALPNAVEEILRYIAP-PETTT 292
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEF 426
R A E+ EIGG +P+ + ++V +RDP+ + +P F
Sbjct: 293 RFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 32/163 (19%)
Query: 278 QGEGDFMDVLLSKIEDNTVMSGH--TRDTV------------IKATALILIFTGSESTYL 323
QG G D L++ IE V G T D V ++ ++ G E+T
Sbjct: 191 QGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNH 250
Query: 324 GIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPV 383
+ + HP + K +E N + V+E LR P PV
Sbjct: 251 QLALAMYDFAQHPDQWMKIKE------------------NPELAPQAVEEVLRWSPTLPV 292
Query: 384 TGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEF 426
T R A ED E+ G +P GT + + HRDPR++ + F
Sbjct: 293 TATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF 335
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 267 NWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGII 326
N++ + +R+ GD + L +++D+ G + + AL+L+ G E++ I
Sbjct: 193 NFILDLVERRRTEPGDDLLSALIRVQDDD--DGRLSADELTSIALVLLLAGFEASVSLIG 250
Query: 327 WTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI 386
LLL HP +L + ++ L V+E LR P P T
Sbjct: 251 IGTYLLLTHPDQLALVR------------------RDPSALPNAVEEILRYIAP-PETTT 291
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEF 426
R A E+ EIGG +P+ + ++V +RDP+ + +P F
Sbjct: 292 RFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 331
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 32/163 (19%)
Query: 278 QGEGDFMDVLLSKIEDNTVMSGH--TRDTV------------IKATALILIFTGSESTYL 323
QG G D L++ IE V G T D V ++ ++ G E+T
Sbjct: 201 QGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNH 260
Query: 324 GIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPV 383
+ + HP + K +E N + V+E LR P PV
Sbjct: 261 QLALAMYDFAQHPDQWMKIKE------------------NPELAPQAVEEVLRWSPTLPV 302
Query: 384 TGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEF 426
T R A ED E+ G +P GT + + HRDPR++ + F
Sbjct: 303 TATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF 345
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 267 NWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGII 326
N++ + +R+ GD + L +++D+ G + + AL+L+ G E++ I
Sbjct: 194 NFILDLVERRRTEPGDDLLSALIRVQDDD--DGRLSADELTSIALVLLLAGFETSVSLIG 251
Query: 327 WTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI 386
LLL HP +L + ++ L V+E LR P P T
Sbjct: 252 IGTYLLLTHPDQLALVR------------------RDPSALPNAVEEILRYIAP-PETTT 292
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEF 426
R A E+ EIGG +P+ + ++V +RDP+ + +P F
Sbjct: 293 RFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 267 NWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGII 326
N++ + +R+ GD + L +++D+ G + + AL+L+ G E++ I
Sbjct: 194 NFILDLVERRRTEPGDDLLSALIRVQDDD--DGRLSADELTSIALVLLLAGFEASVSLIG 251
Query: 327 WTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI 386
LLL HP +L + ++ L V+E LR P P T
Sbjct: 252 IGTYLLLTHPDQLALVR------------------RDPSALPNAVEEILRYIAP-PETTT 292
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEF 426
R A E+ EIGG +P+ + ++V +RDP+ + +P F
Sbjct: 293 RFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 361 MKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW 420
++ Y V+E R YP P + A +D E G P+G +++++++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAV-VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 421 ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR----RSCPGMTSGLQIVQLT 470
+P EFRPERF D F +IP G CPG L I+++
Sbjct: 319 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 366
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 361 MKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW 420
++ Y V+E R YP P + A +D E G P+G +++++++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAV-VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 421 ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR----RSCPGMTSGLQIVQLT 470
+P EFRPERF D F +IP G CPG L I+++
Sbjct: 319 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 366
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 361 MKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW 420
++ Y V+E R YP P + A +D E G P+G +++++++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAV-VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 421 ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR----RSCPGMTSGLQIVQLT 470
+P EFRPERF D F +IP G CPG L I+++
Sbjct: 319 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 366
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 361 MKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW 420
++ Y V+E R YP P + A +D E G P+G +++++++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAV-VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 421 ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR----RSCPGMTSGLQIVQLT 470
+P EFRPERF D F +IP G CPG L I+++
Sbjct: 327 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 374
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 361 MKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMW 420
++ Y V+E R YP P + A +D E G P+G +++++++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAV-VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 421 ENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGR----RSCPGMTSGLQIVQLT 470
+P EFRPERF D F +IP G CPG L I+++
Sbjct: 327 ADPQEFRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 374
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 263 DVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTY 322
+V+ L+ +R+ + D + L+S +D+ G + + AL+L+ G E++
Sbjct: 190 EVVNFILDLVERRRTEPGDDLLSALISVQDDD---DGRLSADELTSIALVLLLAGFEASV 246
Query: 323 LGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGP 382
I LLL HP +L + + S + N V+E LR P P
Sbjct: 247 SLIGIGTYLLLTHPDQLALVR------------ADPSALPN------AVEEILRYIAP-P 287
Query: 383 VTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTH 435
T R A E+ EIGG +P+ + ++V +RDP + +P F R H
Sbjct: 288 ETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTRDTRGH 340
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 326 IWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTG 385
W + LL HP+ L+ +EE+ G E KN +++ ETLR+ +T
Sbjct: 274 FWVMGYLLTHPEALRAVREEIQ---GGKHLRLEERQKNTPVFDSVLWETLRLTAAALIT- 329
Query: 386 IREAMED---CEIGG--YHVPKGTRLIVNIW-KLHRDPRMWENPCEFRPERFL----TTH 435
R+ +D C G YH+ +G RL V + DP++ + P F+ +RFL T
Sbjct: 330 -RDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEK 388
Query: 436 ADVDVNTQHFEY--IPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
D N +Y +P+ CPG + ++ + IL FD+
Sbjct: 389 KDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDV 435
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 74/187 (39%), Gaps = 33/187 (17%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLL 332
A+R G+ D L+ E+ H D I +T +++ G E+T I+ + L
Sbjct: 204 AKRAAPGD-DLTSALIQASENGD----HLTDAEIVSTLQLMVAAGHETTISLIVNAVVNL 258
Query: 333 LNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMED 392
HP+ Q L V G W A+V+ETLR P IR A ED
Sbjct: 259 STHPE-----QRAL-VLSGEAEW------------SAVVEETLRFSTPTSHVLIRFAAED 300
Query: 393 CEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSF 452
+G +P G LIV+ L RD R P +RF T T +I F
Sbjct: 301 VPVGDRVIPAGDALIVSYGALGRDERA-HGPTA---DRFDLT------RTSGNRHISFGH 350
Query: 453 GRRSCPG 459
G CPG
Sbjct: 351 GPHVCPG 357
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 36/203 (17%)
Query: 274 QRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLL 333
+RK + D + +LL E + + T I +L G E+T I ++ LL
Sbjct: 197 KRKRHPQQDMISMLLKGREKDKLTEEEAASTCI-----LLAIAGHETTVNLISNSVLCLL 251
Query: 334 NHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDC 393
HP++L K +E D+ + V+E LR P +T R A ED
Sbjct: 252 QHPEQLLKLRENPDL------------------IGTAVEECLRYESPTQMTA-RVASEDI 292
Query: 394 EIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFG 453
+I G + +G ++ + + +RDP ++ NP F D+ ++ F G
Sbjct: 293 DICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF------------DITRSPNPHLSFGHG 340
Query: 454 RRSCPGMTSGLQIVQLTLARILQ 476
C G + Q+ + +LQ
Sbjct: 341 HHVCLGSSLARLEAQIAINTLLQ 363
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 30/176 (17%)
Query: 266 GNWLEEH------AQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSE 319
G WL ++ +R+ GE D M L++ E + T D +I AT +L+ G E
Sbjct: 205 GMWLRDYLRALIDERRRTPGE-DLMSGLVAVEESGDQL---TEDEII-ATCNLLLIAGHE 259
Query: 320 STYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYP 379
+T I +L P + W + + A+++ET+R P
Sbjct: 260 TTVNLIANAALAMLRTPGQ----------------WAALA--ADGSRASAVIEETMRYDP 301
Query: 380 PGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTH 435
P + R A +D IG + VPKG +++ + HRDP + P F P+R H
Sbjct: 302 PVQLVS-RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRAQIRH 356
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 31/177 (17%)
Query: 285 DVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQE 344
D LL ++ + G + AL+L+ G E+T I L+ HP E
Sbjct: 212 DGLLDELIARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHP-------E 264
Query: 345 ELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGT 404
++DV +++ + +V+E LR +R A ED E+GG + G
Sbjct: 265 QIDVL-----------LRDPGAVSGVVEELLRFTSVSDHI-VRMAKEDIEVGGATIKAGD 312
Query: 405 RLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMT 461
++V+I ++RD + +ENP F R N +H ++ F G C G
Sbjct: 313 AVLVSITLMNRDAKAYENPDIFDARR----------NARH--HVGFGHGIHQCLGQN 357
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 33/175 (18%)
Query: 310 ALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRA 369
A +L+ G E+T I + LL+HP++L + N
Sbjct: 239 AFLLLTAGHETTANMISLGVVGLLSHPEQLTVVK------------------ANPGRTPM 280
Query: 370 IVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPE 429
V+E LR + R A ED EIGG + G +IV++ + DP ++++P
Sbjct: 281 AVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVL--- 337
Query: 430 RFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSG---LQIVQLTLARILQGFDLA 481
DV+ +H ++ F FG C G LQIV TL R + LA
Sbjct: 338 -------DVERGARH--HLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLA 383
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 30/208 (14%)
Query: 252 GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATAL 311
GS TA+++ + +G + + D L+SK+ + ++ G+ + +T
Sbjct: 185 GSRNSTAEQVSEALGGLFGLLGGLVAERREEPRDDLISKLVTDHLVPGNVTTEQLLSTLG 244
Query: 312 ILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIV 371
I I G E+T I + LLL+ P+ + +++ D+ + A V
Sbjct: 245 ITINAGRETTTSMIALSTLLLLDRPELPAELRKDPDL------------------MPAAV 286
Query: 372 KETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERF 431
E LR+ +R A ED E+ G VP +I + + DP +++ PER
Sbjct: 287 DELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDD-----PER- 340
Query: 432 LTTHADVDVNTQHFEYIPFSFGRRSCPG 459
VD + ++ F +G C G
Sbjct: 341 ------VDFHRTDNHHVAFGYGVHQCVG 362
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 316 TGSESTYLGIIWTLSLLLNHPKE-----LKKAQEELDVHVGRDRWVNESDMKNLKYLRAI 370
TGS + GI+ T LL E L KA L H R V + + A
Sbjct: 235 TGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAH----RDVLDELRTTPESTPAA 290
Query: 371 VKETLRIYPPGPVTGI-REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPE 429
V+E +R PP V + R A ED +G + +P+G+R++ + +RDP + +P
Sbjct: 291 VEELMRYDPP--VQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDP------ 342
Query: 430 RFLTTHADV-DVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGF 478
DV DV+ + F G C G T ++ L +L G
Sbjct: 343 -------DVLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGI 385
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 32/176 (18%)
Query: 308 ATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYL 367
+ A+ L+ G E+ + W+ LL + P K+ E + +
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL----------------- 255
Query: 368 RAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIW---KLHRDPRMWENPC 424
A +E LR+YPP + R +G +P GT L+++ + +LH + +
Sbjct: 256 -AAFQEALRLYPPAWIL-TRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH-----FPDGE 308
Query: 425 EFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
FRPERFL + T Y PF G+R C G L + L + F L
Sbjct: 309 AFRPERFLE-----ERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL 359
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 68/173 (39%), Gaps = 26/173 (15%)
Query: 308 ATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYL 367
+ A+ L+ G E+ + W+ LL + P K+ E + +
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL----------------- 255
Query: 368 RAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFR 427
A +E LR+YPP + R +G +P+GT L+++ + R + F+
Sbjct: 256 -AAFQEALRLYPPAWIL-TRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQ 311
Query: 428 PERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDL 480
PERFL + T Y PF G+R C G L + L + F L
Sbjct: 312 PERFL-----AERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL 359
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 36/177 (20%)
Query: 289 SKIEDNTVMSGHT--RDTVIKATAL---ILIFTGSESTYLGIIWTLSLLLNHPKELKKAQ 343
S ED T + G RD + + A+ +L+ G E+ LLL+ P+ ++ +
Sbjct: 209 SAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLR 268
Query: 344 EELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI-REAMEDCEIGGYHVPK 402
E ++ R R ++E LR P G+ R A+ED EI G +
Sbjct: 269 SEPEI---RPRAIDE---------------LLRWIPHRNAVGLSRIALEDVEIKGVRIRA 310
Query: 403 GTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
G + V+ +RDP ++ +P ER H + F FG CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------------VSFGFGPHYCPG 355
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 36/177 (20%)
Query: 289 SKIEDNTVMSGHT--RDTVIKATAL---ILIFTGSESTYLGIIWTLSLLLNHPKELKKAQ 343
S ED T + G RD + + A+ +L+ G E+ LLL+ P+ ++ +
Sbjct: 209 SAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLR 268
Query: 344 EELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI-REAMEDCEIGGYHVPK 402
E ++ R R ++E LR P G+ R A+ED EI G +
Sbjct: 269 SEPEI---RPRAIDE---------------LLRWIPHRNAVGLSRIALEDVEIKGVRIRA 310
Query: 403 GTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
G + V+ +RDP ++ +P ER H + F FG CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------------VSFGFGPHYCPG 355
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 36/177 (20%)
Query: 289 SKIEDNTVMSGHT--RDTVIKATAL---ILIFTGSESTYLGIIWTLSLLLNHPKELKKAQ 343
S ED T + G RD + + A+ +L+ G E+ LLL+ P+ ++ +
Sbjct: 209 SAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLR 268
Query: 344 EELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI-REAMEDCEIGGYHVPK 402
E ++ R R ++E LR P G+ R A+ED EI G +
Sbjct: 269 SEPEI---RPRAIDE---------------LLRWIPHRNAVGLSRIALEDVEIKGVRIRA 310
Query: 403 GTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
G + V+ +RDP ++ +P ER H + F FG CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------------VSFGFGPHYCPG 355
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 36/177 (20%)
Query: 289 SKIEDNTVMSGHT--RDTVIKATAL---ILIFTGSESTYLGIIWTLSLLLNHPKELKKAQ 343
S ED T + G RD + + A+ +L+ G E+ LLL+ P+ ++ +
Sbjct: 209 SAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLR 268
Query: 344 EELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI-REAMEDCEIGGYHVPK 402
E ++ R R ++E LR P G+ R A+ED EI G +
Sbjct: 269 SEPEI---RPRAIDE---------------LLRWIPHRNAVGLSRIALEDVEIKGVRIRA 310
Query: 403 GTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
G + V+ +RDP ++ +P ER H + F FG CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------------VSFGFGPHYCPG 355
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 36/177 (20%)
Query: 289 SKIEDNTVMSGHT--RDTVIKATAL---ILIFTGSESTYLGIIWTLSLLLNHPKELKKAQ 343
S ED T + G RD + + A+ +L+ G E+ LLL+ P+ ++ +
Sbjct: 209 SAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLR 268
Query: 344 EELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI-REAMEDCEIGGYHVPK 402
E ++ R R ++E LR P G+ R A+ED EI G +
Sbjct: 269 SEPEI---RPRAIDE---------------LLRWIPHRNAVGLSRIALEDVEIKGVRIRA 310
Query: 403 GTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
G + V+ +RDP ++ +P ER H + F FG CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------------VSFGFGPHYCPG 355
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 36/177 (20%)
Query: 289 SKIEDNTVMSGHT--RDTVIKATAL---ILIFTGSESTYLGIIWTLSLLLNHPKELKKAQ 343
S ED T + G RD + + A+ +L+ G E+ LLL+ P+ ++ +
Sbjct: 209 SAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLR 268
Query: 344 EELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI-REAMEDCEIGGYHVPK 402
E ++ R R ++E LR P G+ R A+ED EI G +
Sbjct: 269 SEPEI---RPRAIDE---------------LLRWIPHRNAVGLSRIALEDVEIKGVRIRA 310
Query: 403 GTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
G + V+ +RDP ++ +P ER H + F FG CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------------VSFGFGPHYCPG 355
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 36/177 (20%)
Query: 289 SKIEDNTVMSGHT--RDTVIKATAL---ILIFTGSESTYLGIIWTLSLLLNHPKELKKAQ 343
S ED T + G RD + + A+ +L+ G E+ LLL+ P+ ++ +
Sbjct: 209 SAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLR 268
Query: 344 EELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGI-REAMEDCEIGGYHVPK 402
E ++ R R ++E LR P G+ R A+ED EI G +
Sbjct: 269 SEPEI---RPRAIDE---------------LLRWIPHRNAVGLSRIALEDVEIKGVRIRA 310
Query: 403 GTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
G + V+ +RDP ++ +P ER H + F FG CPG
Sbjct: 311 GDAVYVSYLAANRDPEVFPDPDRIDFERSPNPH------------VSFGFGPHYCPG 355
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 369 AIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRP 428
AI+ E +R+ PP ++ +R ED EIGG + G+ + I +RDP ++++P F
Sbjct: 266 AIINEMVRMDPPQ-LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 324
Query: 429 ERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
R ++ F G SC G
Sbjct: 325 TRPPAASRNLS----------FGLGPHSCAG 345
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 369 AIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRP 428
AI+ E +R+ PP ++ +R ED EIGG + G+ + I +RDP ++++P F
Sbjct: 268 AIINEMVRMDPPQ-LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 429 ERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
R ++ F G SC G
Sbjct: 327 TRPPAASRNLS----------FGLGPHSCAG 347
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 364 LKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENP 423
LK V+ETLR Y P R A ED I + KG ++IV + +RD ++ P
Sbjct: 215 LKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEP 274
Query: 424 CEFRPER 430
F+ R
Sbjct: 275 DLFKIGR 281
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLL 332
++R GE ++ + ED + ++ + A IL+ G E+T I + L
Sbjct: 224 SKRGQDGEDLLSALVRTSDEDGSRLTSEE----LLGMAHILLVAGHETTVNLIANGMYAL 279
Query: 333 LNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMED 392
L+HP +L + ++ L V+E LR P R +E
Sbjct: 280 LSHPDQLAALR------------------ADMTLLDGAVEEMLRYEGPVESATYRFPVEP 321
Query: 393 CEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTH 435
++ G +P G ++V + HR P + +P F R H
Sbjct: 322 VDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDTAGH 364
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLL 332
++R GE ++ + ED + ++ + A IL+ G E+T I + L
Sbjct: 224 SKRGQDGEDLLSALVRTSDEDGSRLTSEE----LLGMAHILLVAGHETTVNLIANGMYAL 279
Query: 333 LNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMED 392
L+HP +L + ++ L V+E LR P R +E
Sbjct: 280 LSHPDQLAALR------------------ADMTLLDGAVEEMLRYEGPVESATYRFPVEP 321
Query: 393 CEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTH 435
++ G +P G ++V + HR P + +P F R H
Sbjct: 322 VDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDTAGH 364
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 273 AQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLL 332
++R GE ++ + ED + ++ + A IL+ G E+T I + L
Sbjct: 224 SKRGQDGEDLLSALVRTSDEDGSRLTSEE----LLGMAHILLVAGHETTVNLIANGMYAL 279
Query: 333 LNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMED 392
L+HP +L + ++ L V+E LR P R +E
Sbjct: 280 LSHPDQLAALR------------------ADMTLLDGAVEEMLRYEGPVESATYRFPVEP 321
Query: 393 CEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTH 435
++ G +P G ++V + HR P + +P F R H
Sbjct: 322 VDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDTAGH 364
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 386 IREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTH 435
+R A+ D E+ G ++ +G R++++ +RD ++ NP EF RF H
Sbjct: 318 MRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPNRH 367
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 23/157 (14%)
Query: 274 QRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLL 333
+R++ D + +L + + +S D I A L ++ +E + + LL
Sbjct: 231 ERRVNPGSDLISILCTSEYEGMALS----DKDILALILNVLLAATEPADKTLALMIYHLL 286
Query: 334 NHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDC 393
N+P+++ V DR + RAI ETLR PP + R+ +D
Sbjct: 287 NNPEQMND--------VLADRSL---------VPRAIA-ETLRYKPPVQLIP-RQLSQDT 327
Query: 394 EIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPER 430
+GG + K T + I +RDP +E P F R
Sbjct: 328 VVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR 364
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 30/152 (19%)
Query: 308 ATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYL 367
+TA++L+ G E+T ++ LL+HP++ + + + G
Sbjct: 236 STAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG---------------- 279
Query: 368 RAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFR 427
V+E LR + G R A D E+ G + G +IV +RD ++E+P
Sbjct: 280 --AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDAL- 336
Query: 428 PERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
D++ ++ F FG C G
Sbjct: 337 -----------DIHRSARHHLAFGFGVHQCLG 357
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 30/152 (19%)
Query: 308 ATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYL 367
+TA++L+ G E+T ++ LL+HP++ + + + G
Sbjct: 236 STAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG---------------- 279
Query: 368 RAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFR 427
V+E LR + G R A D E+ G + G +IV +RD ++E+P
Sbjct: 280 --AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDAL- 336
Query: 428 PERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
D++ ++ F FG C G
Sbjct: 337 -----------DIHRSARHHLAFGFGVHQCLG 357
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 30/152 (19%)
Query: 308 ATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYL 367
+TA++L+ G E+T ++ LL+HP++ + + + G
Sbjct: 236 STAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG---------------- 279
Query: 368 RAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFR 427
V+E LR + G R A D E+ G + G +IV +RD ++E+P
Sbjct: 280 --AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDAL- 336
Query: 428 PERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
D++ ++ F FG C G
Sbjct: 337 -----------DIHRSARHHLAFGFGVHQCLG 357
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 30/152 (19%)
Query: 308 ATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYL 367
+TA++L+ G E+T ++ LL+HP++ + + + G
Sbjct: 236 STAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG---------------- 279
Query: 368 RAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFR 427
V+E LR + G R A D E+ G + G +IV +RD ++E+P
Sbjct: 280 --AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDAL- 336
Query: 428 PERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
D++ ++ F FG C G
Sbjct: 337 -----------DIHRSARHHLAFGFGVHQCLG 357
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 156 LLGVPFNDLEYLTQQNAIRTNGSSTARQASAANQELLDYLAILVEQRLV---EPKDDIIS 212
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 213 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK------ 266
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 267 ------------ANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIAS 314
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 315 NQSANRDEEVFENPDEFNMNR 335
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 155 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 211
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 212 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK------ 265
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 266 ------------ANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIAS 313
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 314 NQSANRDEEVFENPDEFNMNR 334
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 157 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 213
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 214 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK------ 267
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 268 ------------ANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIAS 315
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 316 NQSANRDEEVFENPDEFNMNR 336
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 155 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 211
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 212 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK------ 265
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 266 ------------ANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIAS 313
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 314 NQSANRDEEVFENPDEFNMNR 334
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 156 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 212
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 213 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK------ 266
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 267 ------------ANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIAS 314
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 315 NQSANRDEEVFENPDEFNMNR 335
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 155 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 211
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 212 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNAAMVNMIALGVATLAQHPDQLAQLK------ 265
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 266 ------------ANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIAS 313
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 314 NQSANRDEEVFENPDEFNMNR 334
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 155 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 211
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 212 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNANMVNMIALGVATLAQHPDQLAQLK------ 265
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 266 ------------ANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIAS 313
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 314 NQSANRDEEVFENPDEFNMNR 334
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 23/150 (15%)
Query: 281 GDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELK 340
G+ + L+ D +MS + I +T + IFTG E+ + + LL HP +L
Sbjct: 202 GEDLLALMLDAHDRGLMSRNE----IVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLD 257
Query: 341 KAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHV 400
+ D+ L V+E LR Y P + R+ D E+ G +
Sbjct: 258 LLRRRPDL------------------LAQAVEECLR-YDPSVQSNTRQLDVDVELRGRRL 298
Query: 401 PKGTRLIVNIWKLHRDPRMWENPCEFRPER 430
+ ++V +RDPR ++ P +F ER
Sbjct: 299 RRDDVVVVLAGAANRDPRRYDRPDDFDIER 328
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 89/236 (37%), Gaps = 39/236 (16%)
Query: 249 GHIGSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKA 308
G +R++A + ++ E QR G F + D ++ ++++
Sbjct: 189 GPPNELRQSAIERSAPHQAYVAEQCQRPNLAPGGF-GACIHAFSDTGEITPEEAPLLVRS 247
Query: 309 TALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLR 368
L+ G ++T GI + L P E A+ D + R+ +
Sbjct: 248 ----LLSAGLDTTVNGIAAAVYCLARFPDEF--ARLRADPSLARNAF------------- 288
Query: 369 AIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRP 428
+E +R P T R D E+ G + +G ++++ + +RDPR W++P +
Sbjct: 289 ---EEAVRFESPV-QTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRY-- 342
Query: 429 ERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGL---QIVQLTLARILQGFDLA 481
D+ + ++ F G C G ++V LAR + ++A
Sbjct: 343 ----------DITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIA 388
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 23/188 (12%)
Query: 245 IDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDT 304
+D Q + A++I DV+ R + D D L+S++ V D
Sbjct: 170 VDIQMDDPTDPALAERIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEVDGRALDDE 229
Query: 305 VIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNL 364
+ L+ G +T + + + L HP A E+ GR
Sbjct: 230 EAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAED----PGR------------ 273
Query: 365 KYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKL--HRDPRMWEN 422
+ AIV+E LR PP P R + E+ G +P ++VN W L +RD ++
Sbjct: 274 --IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDD 328
Query: 423 PCEFRPER 430
P F P R
Sbjct: 329 PDRFDPSR 336
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 156 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 212
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 213 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK------ 266
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 267 ------------ANPSLAPQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIAS 314
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 315 NQSANRDEEVFENPDEFNMNR 335
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 155 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 211
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 212 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK------ 265
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 266 ------------ANPSLAPQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIAS 313
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 314 NQSANRDEEVFENPDEFNMNR 334
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 23/188 (12%)
Query: 245 IDFQGHIGSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDT 304
+D Q + A++I DV+ R + D D L+S++ V D
Sbjct: 190 VDIQMDDPTDPALAERIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEVDGRALDDE 249
Query: 305 VIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNL 364
+ L+ G +T + + + L HP A E+ GR
Sbjct: 250 EAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAED----PGR------------ 293
Query: 365 KYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKL--HRDPRMWEN 422
+ AIV+E LR PP P R + E+ G +P ++VN W L +RD ++
Sbjct: 294 --IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDD 348
Query: 423 PCEFRPER 430
P F P R
Sbjct: 349 PDRFDPSR 356
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 382 PVTGI-REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDV 440
PV+ R A+ED E+GG + KG R++++ + D ++E+P F R H
Sbjct: 295 PVSAFQRTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFEDPHTFNILRSPNPHVGFGG 354
Query: 441 NTQHF 445
H+
Sbjct: 355 TGAHY 359
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 155 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 211
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 212 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK------ 265
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 266 ------------ANPSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIAS 313
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 314 NQSANRDEEVFENPDEFNMNR 334
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 156 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 212
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ + I ++ L HP +L + +
Sbjct: 213 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLK------ 266
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 267 ------------ANPSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIAS 314
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 315 NQSANRDEEVFENPDEFNMNR 335
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 25/201 (12%)
Query: 234 VLGDAIPWLEWIDFQGHI----GSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLS 289
+LG LE++ Q I S R A + + ++L +++L + D ++S
Sbjct: 155 LLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLV---EPKDDIIS 211
Query: 290 KIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVH 349
K+ V G+ + A +L+ G+ I ++ L HP +L + +
Sbjct: 212 KLCTEQVKPGNIDKSDAVQIAFLLLVAGNAVMVNMIALGVATLAQHPDQLAQLK------ 265
Query: 350 VGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVN 409
N V+E R + + R A ED IG V +I +
Sbjct: 266 ------------ANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIAS 313
Query: 410 IWKLHRDPRMWENPCEFRPER 430
+RD ++ENP EF R
Sbjct: 314 NQSANRDEEVFENPDEFNMNR 334
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 370 IVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPE 429
+V+E LR P + +R D I G +P GT ++ + +RDP +++P F P
Sbjct: 290 VVEEVLRWTSPA-MHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPG 348
Query: 430 RFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTL 471
R H I F G C G S L ++L++
Sbjct: 349 RKPNRH------------ITFGHGMHHCLG--SALARIELSV 376
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 71/175 (40%), Gaps = 24/175 (13%)
Query: 249 GHIGSMRRTAKKIDDVIGNWLEEHAQRKLQGEGDFMDVLLSKIEDNTVMSGHTRDTVIKA 308
G +R+TA + ++ E QR G F + D ++ ++++
Sbjct: 187 GPPNELRQTAIERSAPHQAYVNEQCQRPNLAPGGF-GACIHAFTDTGEITPDEAPLLVRS 245
Query: 309 TALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYLR 368
L+ G ++T GI + L P EL++ + D + R+ +
Sbjct: 246 ----LLSAGLDTTVNGIGAAVYCLARFPGELQRLRS--DPTLARNAF------------- 286
Query: 369 AIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENP 423
+E +R P T R + E+GG + +G ++++ + +RDPR W +P
Sbjct: 287 ---EEAVRFESPV-QTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDP 337
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 19/133 (14%)
Query: 285 DVLLSKIEDNTVMSG-HTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQ 343
D LLS + + M G + A A++L+ G E+T I + LL HP + K
Sbjct: 204 DALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLA 263
Query: 344 EELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKG 403
E + + + V+E LR P IR ED G +P G
Sbjct: 264 E------------------DPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAG 305
Query: 404 TRLIVNIWKLHRD 416
+++ + +RD
Sbjct: 306 EMVMLGLAAANRD 318
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 353 DRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAME---DCEIGGYHVPKGTRLIVN 409
D V ++ + +++V E+LRI PP P + + + V KG L
Sbjct: 316 DGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGY 375
Query: 410 IWKLHRDPRMWENPCEFRPERFL 432
+DP++++ P E+ P+RF+
Sbjct: 376 QPFATKDPKVFDRPEEYVPDRFV 398
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFE 446
R A D ++G V KG ++V + + DP + NP +R T
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPT-----------S 334
Query: 447 YIPFSFGRRSCPGMTSGLQIVQLTLARILQ---GFDLA 481
++ F G+ CPG G + Q+ + +L+ G DLA
Sbjct: 335 HLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLA 372
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFE 446
R A D ++G V KG ++V + + DP + NP +R T
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPT-----------S 334
Query: 447 YIPFSFGRRSCPGMTSGLQIVQLTLARILQ---GFDLA 481
++ F G+ CPG G + Q+ + +L+ G DLA
Sbjct: 335 HLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLA 372
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFE 446
R A D ++G V KG ++V + + DP + NP +R T
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPT-----------S 334
Query: 447 YIPFSFGRRSCPGMTSGLQIVQLTLARILQ---GFDLA 481
++ F G+ CPG G + Q+ + +L+ G DLA
Sbjct: 335 HLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLA 372
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFE 446
R A D ++G V KG ++V + + DP + NP +R T
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPT-----------S 334
Query: 447 YIPFSFGRRSCPGMTSGLQIVQLTLARILQ---GFDLA 481
++ F G+ CPG G + Q+ + +L+ G DLA
Sbjct: 335 HLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLA 372
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFE 446
R A D ++G V KG ++V + + DP + NP +R T
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPT-----------S 334
Query: 447 YIPFSFGRRSCPGMTSGLQIVQLTLARILQ---GFDLA 481
++ F G+ CPG G + Q+ + +L+ G DLA
Sbjct: 335 HLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLA 372
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFE 446
R A D ++G V KG ++V + + DP + NP +R T
Sbjct: 285 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPT-----------S 333
Query: 447 YIPFSFGRRSCPGMTSGLQIVQLTLARILQ---GFDLA 481
++ F G+ CPG G + Q+ + +L+ G DLA
Sbjct: 334 HLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLA 371
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 68/180 (37%), Gaps = 30/180 (16%)
Query: 308 ATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYL 367
L+LI G+++T + + L +P + K + N +
Sbjct: 257 GNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLK------------------ANPALV 298
Query: 368 RAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFR 427
+V E +R P R A+ D E+GG + KG ++++ + +RD + + P EF
Sbjct: 299 ETMVPEIIRWQTP-LAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFI 357
Query: 428 PERFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGVYP 487
+R + +++ F FG C G +++ IL F V P
Sbjct: 358 IDR-----------PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEP 406
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 18/109 (16%)
Query: 308 ATALILIFTGSESTYLGIIWTLSLLLNHPKELKKAQEELDVHVGRDRWVNESDMKNLKYL 367
A A++L+ G E+T I + LL HP + K E + +
Sbjct: 228 AMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAE------------------DPSLI 269
Query: 368 RAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRD 416
+ V+E LR P IR ED G +P G +++ + +RD
Sbjct: 270 SSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRD 318
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 371 VKETLRIYPPGPVTGI-REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPE 429
V+E LR+ PV G+ R D IG +P G R+++ +RD R ++ P+
Sbjct: 286 VEELLRLT--SPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDER------QYGPD 337
Query: 430 RFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARIL 475
A++DV + FS G C G + ++ L +L
Sbjct: 338 A-----AELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELL 378
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 371 VKETLRIYPPGPVTGI-REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPE 429
V+E LR+ PV G+ R D IG +P G R+++ +RD R ++ P+
Sbjct: 287 VEELLRLT--SPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDER------QYGPD 338
Query: 430 RFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARIL 475
A++DV + FS G C G + ++ L +L
Sbjct: 339 A-----AELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELL 379
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 371 VKETLRIYPPGPVTGI-REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPE 429
V+E LR+ PV G+ R D IG +P G R+++ +RD R ++ P+
Sbjct: 286 VEELLRLT--SPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDER------QYGPD 337
Query: 430 RFLTTHADVDVNTQHFEYIPFSFGRRSCPGMTSGLQIVQLTLARIL 475
A++DV + FS G C G + ++ L +L
Sbjct: 338 A-----AELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELL 378
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 387 REAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFE 446
R A D ++G V KG ++V + + DP + NP +R T QHF
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPTSHLAHGRGQHF- 344
Query: 447 YIPFSFGRRSCPGMTSGLQIVQLTLARILQ---GFDLA 481
CPG G + Q+ + +L+ G DLA
Sbjct: 345 ----------CPGSALGRRHAQIGIEALLKKMPGVDLA 372
>pdb|2F9J|A Chain A, 3.0 Angstrom Resolution Structure Of A Y22m Mutant Of
The Spliceosomal Protein P14 Bound To A Region Of
Sf3b155
pdb|2F9J|B Chain B, 3.0 Angstrom Resolution Structure Of A Y22m Mutant Of
The Spliceosomal Protein P14 Bound To A Region Of
Sf3b155
Length = 125
Score = 31.6 bits (70), Expect = 0.95, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 47 LIGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCF 97
+I +LP I E + I G KYGPI +R+G P +++ + +D F
Sbjct: 22 MIRNLPYKITAEEMYDIFG----KYGPIRQIRVGNTPETRGTAYVVYEDIF 68
>pdb|3LQV|A Chain A, Branch Recognition By Sf3b14
pdb|3LQV|B Chain B, Branch Recognition By Sf3b14
Length = 115
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 48 IGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCFTTNDRV 103
I +LP I E + I G KYGPI +R+G P +++ + +D F + V
Sbjct: 13 IRNLPYKITAEEMYDIFG----KYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAV 64
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 70/199 (35%), Gaps = 31/199 (15%)
Query: 281 GDFMDVLLSKIEDNTVMSGHTRDTVIKATALILIFTGSESTYLGIIWTLSLLLNHPKELK 340
GD M LL D+ ++ T L++I G E+T I + LL P +L
Sbjct: 207 GDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLA 266
Query: 341 KAQEELDVHVGRDRWVNESDMKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI-GGYH 399
V G W + +V+ETLR P +R A+ D + G
Sbjct: 267 L------VRKGEVTWAD------------VVEETLRHEPAVKHLPLRYAVTDIALPDGRT 308
Query: 400 VPKGTRLIVNIWKLHRDPRMWENPCEFRPERFLTTHADVDVNTQHFEYIPFSFGRRSCPG 459
+ +G ++ + +R P E+ F R + E++ F G C G
Sbjct: 309 IARGEPILASYAAANRHPDWHEDADTFDATRTVK------------EHLAFGHGVHFCLG 356
Query: 460 MTSGLQIVQLTLARILQGF 478
V L L + F
Sbjct: 357 APLARMEVTLALESLFGRF 375
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 13/94 (13%)
Query: 367 LRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEF 426
L IV+E +R P +R A D E+ G + G L++N + DP + P +F
Sbjct: 322 LPGIVEEAIRWTTPV-QHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKF 380
Query: 427 RPERFLTTHADVDVNTQHFEYIPFSFGRRSCPGM 460
P R H + F G C G+
Sbjct: 381 DPTRPANRH------------LAFGAGSHQCLGL 402
>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9L|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|B Chain B, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|B Chain B, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|B Chain B, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|B Chain B, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|B Chain B, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 394
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 436 ADVDVNTQHFEYIPFSFGRRSCPGMTSGL--QIVQLTLARILQG 477
AD+D ++ +++I S G PG+ S L ++ QL L R+L+G
Sbjct: 289 ADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKG 332
>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
Length = 394
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 436 ADVDVNTQHFEYIPFSFGRRSCPGMTSGL--QIVQLTLARILQG 477
AD+D ++ +++I S G PG+ S L ++ QL L R+L+G
Sbjct: 289 ADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKG 332
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 11/138 (7%)
Query: 361 MKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI----GGYHVPKGTRLIVNIWKLHRD 416
++ ++ +++V E LR PP R A +D I + V G L RD
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGR-AKKDLVIESHDAAFKVKAGEMLYGYQPLATRD 399
Query: 417 PRMWENPCEFRPERFLTTHADVDVN----TQHFEYIPFSFGRRSCPGMTSGLQIVQLTLA 472
P++++ EF PERF+ + + + E + G + C G + + +L +
Sbjct: 400 PKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVI 459
Query: 473 RILQGFDL--ATVGVYPL 488
I + +D VG PL
Sbjct: 460 EIFRRYDSFDIEVGTSPL 477
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 11/138 (7%)
Query: 361 MKNLKYLRAIVKETLRIYPPGPVTGIREAMEDCEI----GGYHVPKGTRLIVNIWKLHRD 416
++ ++ +++V E LR PP R A +D I + V G L RD
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGR-AKKDLVIESHDAAFKVKAGEMLYGYQPLATRD 399
Query: 417 PRMWENPCEFRPERFLTTHADVDVN----TQHFEYIPFSFGRRSCPGMTSGLQIVQLTLA 472
P++++ EF PERF+ + + + E + G + C G + + +L +
Sbjct: 400 PKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVI 459
Query: 473 RILQGFDL--ATVGVYPL 488
I + +D VG PL
Sbjct: 460 EIFRRYDSFDIEVGTSPL 477
>pdb|2F9D|A Chain A, 2.5 Angstrom Resolution Structure Of The Spliceosomal
Protein P14 Bound To Region Of Sf3b155
pdb|2F9D|B Chain B, 2.5 Angstrom Resolution Structure Of The Spliceosomal
Protein P14 Bound To Region Of Sf3b155
Length = 125
Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 48 IGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCF 97
I +LP I E + I G KYGPI +R+G P +++ + +D F
Sbjct: 23 IRNLPYKITAEEMYDIFG----KYGPIRQIRVGNTPETRGTAYVVYEDIF 68
>pdb|2FHO|B Chain B, Nmr Solution Structure Of The Human Spliceosomal Protein
Complex P14-Sf3b155
Length = 87
Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 48 IGHLPLLIAEEPVCKILGAIADKYGPIYSLRLGKHPTLIVSSWEIVKDCF 97
I +LP I E + I G KYGPI +R+G P +++ + +D F
Sbjct: 17 IRNLPYKITAEEMYDIFG----KYGPIRQIRVGNTPETRGTAYVVYEDIF 62
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 366 YLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCE 425
YL+AI +E LR PP T +R+ E ++G + +G + V I +RD ++ + +
Sbjct: 240 YLKAI-EEALRYSPPVMRT-VRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEK 297
Query: 426 FRPERFLTTH 435
F P+R H
Sbjct: 298 FIPDRNPNPH 307
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 366 YLRAIVKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCE 425
YL+AI +E LR PP T +R+ E ++G + +G + V I +RD ++ + +
Sbjct: 240 YLKAI-EEALRYSPPVMRT-VRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEK 297
Query: 426 FRPERFLTTH 435
F P+R H
Sbjct: 298 FIPDRNPNPH 307
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 371 VKETLRIYPPGPVTGIREAMEDCEIGGYHVPKGTRLIVNIWKLHRDPRMWENPCEFRPER 430
V+E LR PP T IR E +I + +G + V I +RD ++++P F P+R
Sbjct: 244 VEEALRFSPPVMRT-IRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR 302
Query: 431 FLTTH 435
H
Sbjct: 303 TPNPH 307
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,558,486
Number of Sequences: 62578
Number of extensions: 619018
Number of successful extensions: 1823
Number of sequences better than 100.0: 196
Number of HSP's better than 100.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1499
Number of HSP's gapped (non-prelim): 218
length of query: 489
length of database: 14,973,337
effective HSP length: 103
effective length of query: 386
effective length of database: 8,527,803
effective search space: 3291731958
effective search space used: 3291731958
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)