BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011297
(489 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 144/221 (65%), Gaps = 5/221 (2%)
Query: 195 IEDVRR---EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+EDV R E++I+++L H N+++ Y+ +ED+ +IY+VMELC GGEL +R++ + +
Sbjct: 64 VEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR-VFR 121
Query: 252 EEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
E DA +M +LS VA+CH V HRDLKPENFLF + +S LK IDFGL+ KP +
Sbjct: 122 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 181
Query: 312 LNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADP 371
+ VG+ YYV+P+VL YG E D WS GV+ Y+LLCG PF A T+ + + +
Sbjct: 182 MRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTF 241
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+F E W ++SP+A ++RLL K ++R+T+ QAL H W
Sbjct: 242 TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 144/221 (65%), Gaps = 5/221 (2%)
Query: 195 IEDVRR---EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+EDV R E++I+++L H N+++ Y+ +ED+ +IY+VMELC GGEL +R++ + +
Sbjct: 47 VEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR-VFR 104
Query: 252 EEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
E DA +M +LS VA+CH V HRDLKPENFLF + +S LK IDFGL+ KP +
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164
Query: 312 LNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADP 371
+ VG+ YYV+P+VL YG E D WS GV+ Y+LLCG PF A T+ + + +
Sbjct: 165 MRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTF 224
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+F E W ++SP+A ++RLL K ++R+T+ QAL H W
Sbjct: 225 TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 142/212 (66%), Gaps = 2/212 (0%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
EV +L+ L H N+++ YD +ED N Y+VME KGGEL D I+ R K++E DA +++
Sbjct: 86 EVAVLKLLD-HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIK 143
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAY 320
Q+LS V + H +VHRDLKPEN L SKE+++ +K +DFGLS + +++ + +G+AY
Sbjct: 144 QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAY 203
Query: 321 YVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS 380
Y+APEVL + Y + D+WSIGVI +ILL G PF +T+ I R V K +FD W +
Sbjct: 204 YIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263
Query: 381 LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+S A D +K++L D ++R++A QAL HPW+
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 136/217 (62%), Gaps = 3/217 (1%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ E+ +LR + H+N+V D YE +++Y+VM+L GGEL DRI+ +G Y+E+DA
Sbjct: 67 IENEIAVLRKIK-HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF-YTEKDAST 124
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L V + H G+VHRDLKPEN L+ S++E S + DFGLS + ++ G
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACG 184
Query: 318 SAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEA 376
+ YVAPEVL + Y D WSIGVIAYILLCG PF+ +S +F +LKA+ FD
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSP 244
Query: 377 PWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
W +S A DF++ L+ KD KR T QA HPW+A
Sbjct: 245 YWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIA 281
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 138/213 (64%), Gaps = 2/213 (0%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
EV +L+ L H N+++ Y+ +ED N Y+VME+ +GGEL D I+ R K+SE DA ++M
Sbjct: 54 EVAVLKQLD-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ-KFSEVDAAVIMK 111
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAY 320
Q+LS + H +VHRDLKPEN L SK ++ +K +DFGLS + + ++ + +G+AY
Sbjct: 112 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY 171
Query: 321 YVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS 380
Y+APEVL + Y + D+WS GVI YILLCG PF +T+ I + V K SFD W
Sbjct: 172 YIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 231
Query: 381 LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+S EA VK +L + KR++A +AL+HPW+
Sbjct: 232 VSDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 264
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 194 bits (493), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 138/214 (64%), Gaps = 2/214 (0%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
EV +L+ L H N+++ Y+ +ED N Y+VME+ +GGEL D I+ R K+SE DA ++M
Sbjct: 71 EVAVLKQLD-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ-KFSEVDAAVIMK 128
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAY 320
Q+LS + H +VHRDLKPEN L SK ++ +K +DFGLS + + ++ + +G+AY
Sbjct: 129 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY 188
Query: 321 YVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS 380
Y+APEVL + Y + D+WS GVI YILLCG PF +T+ I + V K SFD W
Sbjct: 189 YIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 248
Query: 381 LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+S EA VK +L + KR++A +AL+HPW+
Sbjct: 249 VSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVK 282
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 33/302 (10%)
Query: 111 KNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHC 170
+N F F Y + +G+G FG K + + Q+ AVKVI K
Sbjct: 12 ENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDR---ITQQEYAVKVINK----------A 58
Query: 171 PKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIV 230
TIL REV++L+ L H N+++ ++ ED + YIV
Sbjct: 59 SAKNKDTSTIL------------------REVELLKKL-DHPNIMKLFEILEDSSSFYIV 99
Query: 231 MELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE 290
EL GGEL D I+ R ++SE DA ++ Q+ S + + H +VHRDLKPEN L SKE
Sbjct: 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE 158
Query: 291 ENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCG 350
++ +K IDFGLS + + ++ D +G+AYY+APEVL +Y + D+WS GVI YILL G
Sbjct: 159 KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSG 218
Query: 351 SRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHP 410
+ PF+ + E I + V +FD W ++S +A D ++++L R+TA Q L HP
Sbjct: 219 TPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 411 WL 412
W+
Sbjct: 279 WI 280
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ E+ +L + H N+V D YE ++Y++M+L GGEL DRI+ +G Y+E DA
Sbjct: 63 MENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASR 120
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L V + H G+VHRDLKPEN L+ S +E+S + DFGLS P L+ G
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 318 SAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEA 376
+ YVAPEVL + Y D WSIGVIAYILLCG PF+ ++ +F +LKA+ FD
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 377 PWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
W +S A DF++ L+ KD KR T QAL HPW+A
Sbjct: 241 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ E+ +L + H N+V D YE ++Y++M+L GGEL DRI+ +G Y+E DA
Sbjct: 63 MENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASR 120
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L V + H G+VHRDLKPEN L+ S +E+S + DFGLS P L+ G
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 318 SAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEA 376
+ YVAPEVL + Y D WSIGVIAYILLCG PF+ ++ +F +LKA+ FD
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 377 PWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
W +S A DF++ L+ KD KR T QAL HPW+A
Sbjct: 241 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 33/302 (10%)
Query: 111 KNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHC 170
+N F F Y + +G+G FG K + + Q+ AVKVI K
Sbjct: 12 ENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDR---ITQQEYAVKVINK----------A 58
Query: 171 PKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIV 230
TIL REV++L+ L H N+++ ++ ED + YIV
Sbjct: 59 SAKNKDTSTIL------------------REVELLKKL-DHPNIMKLFEILEDSSSFYIV 99
Query: 231 MELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE 290
EL GGEL D I+ R ++SE DA ++ Q+ S + + H +VHRDLKPEN L SKE
Sbjct: 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE 158
Query: 291 ENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCG 350
++ +K IDFGLS + + ++ D +G+AYY+APEVL +Y + D+WS GVI YILL G
Sbjct: 159 KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSG 218
Query: 351 SRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHP 410
+ PF+ + E I + V +FD W ++S +A D ++++L R+TA Q L HP
Sbjct: 219 TPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 411 WL 412
W+
Sbjct: 279 WI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 33/302 (10%)
Query: 111 KNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHC 170
+N F F Y + +G+G FG K + + Q+ AVKVI K
Sbjct: 12 ENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDR---ITQQEYAVKVINK----------A 58
Query: 171 PKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIV 230
TIL REV++L+ L H N+++ ++ ED + YIV
Sbjct: 59 SAKNKDTSTIL------------------REVELLKKL-DHPNIMKLFEILEDSSSFYIV 99
Query: 231 MELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE 290
EL GGEL D I+ R ++SE DA ++ Q+ S + + H +VHRDLKPEN L SKE
Sbjct: 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE 158
Query: 291 ENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCG 350
++ +K IDFGLS + + ++ D +G+AYY+APEVL +Y + D+WS GVI YILL G
Sbjct: 159 KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSG 218
Query: 351 SRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHP 410
+ PF+ + E I + V +FD W ++S +A D ++++L R+TA Q L HP
Sbjct: 219 TPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 411 WL 412
W+
Sbjct: 279 WI 280
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ E+ +L + H N+V D YE ++Y++M+L GGEL DRI+ +G Y+E DA
Sbjct: 63 MENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASR 120
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L V + H G+VHRDLKPEN L+ S +E+S + DFGLS P L+ G
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 318 SAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEA 376
+ YVAPEVL + Y D WSIGVIAYILLCG PF+ ++ +F +LKA+ FD
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 377 PWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
W +S A DF++ L+ KD KR T QAL HPW+A
Sbjct: 241 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ E+ +L + H N+V D YE ++Y++M+L GGEL DRI+ +G Y+E DA
Sbjct: 63 MENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASR 120
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L V + H G+VHRDLKPEN L+ S +E+S + DFGLS P L+ G
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 318 SAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEA 376
+ YVAPEVL + Y D WSIGVIAYILLCG PF+ ++ +F +LKA+ FD
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 377 PWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
W +S A DF++ L+ KD KR T QAL HPW+A
Sbjct: 241 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 139/228 (60%), Gaps = 4/228 (1%)
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
C+ + A + E+ +L+ + H+N+V D YE + Y+VM+L GGEL DRIL
Sbjct: 41 CIKKSPAFRDSSLENEIAVLKKIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE 99
Query: 246 RGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDY 305
RG Y+E+DA +V+ Q+LS V + H G+VHRDLKPEN L+ + EENS + DFGLS
Sbjct: 100 RG-VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK- 157
Query: 306 VKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFR 364
++ + ++ G+ YVAPEVL + Y D WSIGVI YILLCG PF+ TES +F
Sbjct: 158 MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFE 217
Query: 365 AVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ + F+ W +S A DF+ LL KD +R T +ALSHPW+
Sbjct: 218 KIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 137/217 (63%), Gaps = 2/217 (0%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E++ E+ +L++L H N+++ +D +ED Y+V E +GGEL ++I++R K+ E DA
Sbjct: 91 EEIYNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDA 148
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+M QILS + + H +VHRD+KPEN L +K ++K +DFGLS + D +L D
Sbjct: 149 ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 316 VGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDE 375
+G+AYY+APEVL + Y + D+WS GVI YILLCG PF + + I + V K FD
Sbjct: 209 LGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF 268
Query: 376 APWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
W ++S EA + +K +L DY KR TA +AL+ W+
Sbjct: 269 NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 32/306 (10%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
F Y+ +G+G FG K K + GQ+ AVKVI K QV K + +
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDK---ITGQECAVKVISKR------QV---KQKTDKE 95
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
++L REV++L+ L H N+++ Y+ +ED Y+V E+ GGE
Sbjct: 96 SLL------------------REVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGE 136
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L D I+SR ++SE DA ++ Q+LS + + H +VHRDLKPEN L SK ++++++ I
Sbjct: 137 LFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 195
Query: 299 DFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWART 358
DFGLS + + +++ D +G+AYY+APEVLH +Y + D+WS GVI YILL G PF
Sbjct: 196 DFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 255
Query: 359 ESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
E I + V K +F+ W +S A D ++++L R++A AL H W+
Sbjct: 256 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 315
Query: 419 KIPSDM 424
+I D+
Sbjct: 316 QISVDV 321
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 32/306 (10%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
F Y+ +G+G FG K K + GQ+ AVKVI K QV K + +
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDK---ITGQECAVKVISKR------QV---KQKTDKE 71
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
++L REV++L+ L H N+++ Y+ +ED Y+V E+ GGE
Sbjct: 72 SLL------------------REVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGE 112
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L D I+SR ++SE DA ++ Q+LS + + H +VHRDLKPEN L SK ++++++ I
Sbjct: 113 LFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 171
Query: 299 DFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWART 358
DFGLS + + +++ D +G+AYY+APEVLH +Y + D+WS GVI YILL G PF
Sbjct: 172 DFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
Query: 359 ESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
E I + V K +F+ W +S A D ++++L R++A AL H W+
Sbjct: 232 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 291
Query: 419 KIPSDM 424
+I D+
Sbjct: 292 QISVDV 297
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 32/306 (10%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
F Y+ +G+G FG K K + GQ+ AVKVI K QV K + +
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDK---ITGQECAVKVISKR------QV---KQKTDKE 94
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
++L REV++L+ L H N+++ Y+ +ED Y+V E+ GGE
Sbjct: 95 SLL------------------REVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGE 135
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L D I+SR ++SE DA ++ Q+LS + + H +VHRDLKPEN L SK ++++++ I
Sbjct: 136 LFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 194
Query: 299 DFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWART 358
DFGLS + + +++ D +G+AYY+APEVLH +Y + D+WS GVI YILL G PF
Sbjct: 195 DFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 254
Query: 359 ESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
E I + V K +F+ W +S A D ++++L R++A AL H W+
Sbjct: 255 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 314
Query: 419 KIPSDM 424
+I D+
Sbjct: 315 QISVDV 320
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 164/294 (55%), Gaps = 32/294 (10%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
F Y+ +G+G FG K K + GQ+ AVKVI K QV K + +
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDK---ITGQECAVKVISKR------QV---KQKTDKE 77
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
++L REV++L+ L H N+++ Y+ +ED Y+V E+ GGE
Sbjct: 78 SLL------------------REVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGE 118
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L D I+SR ++SE DA ++ Q+LS + + H +VHRDLKPEN L SK ++++++ I
Sbjct: 119 LFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 177
Query: 299 DFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWART 358
DFGLS + + +++ D +G+AYY+APEVLH +Y + D+WS GVI YILL G PF
Sbjct: 178 DFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 237
Query: 359 ESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
E I + V K +F+ W +S A D ++++L R++A AL H W+
Sbjct: 238 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 32/306 (10%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
F Y+ +G+G FG K K + GQ+ AVKVI K QV K + +
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDK---ITGQECAVKVISKR------QV---KQKTDKE 71
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
++L REV++L+ L H N+ + Y+ +ED Y+V E+ GGE
Sbjct: 72 SLL------------------REVQLLKQLD-HPNIXKLYEFFEDKGYFYLVGEVYTGGE 112
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L D I+SR ++SE DA ++ Q+LS + + H +VHRDLKPEN L SK ++++++ I
Sbjct: 113 LFDEIISRK-RFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRII 171
Query: 299 DFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWART 358
DFGLS + + ++ D +G+AYY+APEVLH +Y + D+WS GVI YILL G PF
Sbjct: 172 DFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
Query: 359 ESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
E I + V K +F+ W +S A D +++ L R++A AL H W+
Sbjct: 232 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKE 291
Query: 419 KIPSDM 424
+I D+
Sbjct: 292 QISVDV 297
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 133/219 (60%), Gaps = 4/219 (1%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
VR E+ +L L+ H N+++ + +E I +V+EL GGEL DRI+ +G YSE DA
Sbjct: 95 VRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG-YYSERDAAD 152
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
+ QIL VA+ H G+VHRDLKPEN L+ + ++ LK DFGLS V+ + + G
Sbjct: 153 AVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCG 212
Query: 318 SAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFW-ARTESGIFRAVLKADPSFDE 375
+ Y APE+L +YG E DMWS+G+I YILLCG PF+ R + +FR +L + F
Sbjct: 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFIS 272
Query: 376 APWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
W +S A D V++L+ D +KRLT QAL HPW+
Sbjct: 273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTG 311
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 140/228 (61%), Gaps = 5/228 (2%)
Query: 191 TAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS---RG 247
+ + +E + E+++L++L H N+++ ++ +ED N+YIVME C+GGELL+RI+S RG
Sbjct: 60 SQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG 118
Query: 248 GKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVK 307
SE +M Q+++ +A+ H Q VVH+DLKPEN LF +S +K IDFGL++ K
Sbjct: 119 KALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178
Query: 308 PDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
DE + G+A Y+APEV R + D+WS GV+ Y LL G PF + + +
Sbjct: 179 SDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT 238
Query: 368 KADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
+P++ P L+P+A+D +K++L KD +R +AAQ L H W +
Sbjct: 239 YKEPNYAVECRP-LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 158/293 (53%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
HYE+GEE+G G F + +KG+ G++ A K I K ++ +
Sbjct: 6 HYEMGEELGSGQFAIVRKCR-QKGT--GKEYAAKFIKKR------RLSSSRR-------- 48
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ E++ REV ILR + H N++ +D +E+ ++ +++EL GGEL D
Sbjct: 49 ----------GVSREEIEREVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFD 97
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +E++A + QIL V + H + + H DLKPEN + K N +K IDF
Sbjct: 98 -FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 156
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
G++ ++ +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 157 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 216
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ + FDE + + S A DF++RLL KD ++R+T AQ+L H W+
Sbjct: 217 QETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 163/309 (52%), Gaps = 32/309 (10%)
Query: 106 DIGLDKNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIF 165
D+G + N F HYE+GEE+G G F + +KG+ G++ A K I K
Sbjct: 12 DLGTE-NLYFQSMVEDHYEMGEELGSGQFAIVRKCR-QKGT--GKEYAAKFIKKR----- 62
Query: 166 LQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDD 225
++ + ++ E++ REV ILR + H N++ +D +E+
Sbjct: 63 -RLXSSRR------------------GVSREEIEREVNILREIR-HPNIITLHDIFENKT 102
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
++ +++EL GGEL D L+ +E++A + QIL V + H + + H DLKPEN +
Sbjct: 103 DVVLILELVSGGELFD-FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIM 161
Query: 286 FTSKE-ENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVI 343
K N +K IDFG++ ++ +I G+ +VAPE++ + G EADMWSIGVI
Sbjct: 162 LLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 221
Query: 344 AYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTA 403
YILL G+ PF T+ + + FDE + + S A DF++RLL KD ++R+
Sbjct: 222 TYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXI 281
Query: 404 AQALSHPWL 412
AQ+L H W+
Sbjct: 282 AQSLEHSWI 290
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 133/225 (59%), Gaps = 4/225 (1%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
+ + RE +I R L H N+V+ +D+ ++ Y+V +L GGEL + I++R YSE DA
Sbjct: 48 QKLEREARICRLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-YYSEADA 105
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER-LND 314
+ QIL V CH G+VHRDLKPEN L SK + +++K DFGL+ V+ D++
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 315 IVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
G+ Y++PEVL + YG DMW+ GVI YILL G PFW + +++ + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
W +++PEA D + ++L + KR+TA++AL HPW+ V
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTV 270
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 157/293 (53%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
HYE+GEE+G G F + +KG+ G++ A K I K ++ +
Sbjct: 13 HYEMGEELGSGQFAIVRKCR-QKGT--GKEYAAKFIKKR------RLSSSRR-------- 55
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ E++ REV ILR + H N++ +D +E+ ++ +++EL GGEL D
Sbjct: 56 ----------GVSREEIEREVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFD 104
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +E++A + QIL V + H + + H DLKPEN + K N +K IDF
Sbjct: 105 -FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 163
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
G++ ++ +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 164 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 223
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ + FDE + + S A DF++RLL KD ++R+ AQ+L H W+
Sbjct: 224 QETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 126/224 (56%), Gaps = 11/224 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E RRE ILR + GH +++ D+YE +++V +L + GEL D L+ SE++
Sbjct: 144 EATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFD-YLTEKVALSEKET 202
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+ +M +L V+F H +VHRDLKPEN L ++N ++ DFG S +++P E+L ++
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLREL 259
Query: 316 VGSAYYVAPEVL-------HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
G+ Y+APE+L H YG E D+W+ GVI + LL GS PFW R + + R +++
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME 319
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
F W S D + RLL D RLTA QAL HP+
Sbjct: 320 GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 162/308 (52%), Gaps = 37/308 (12%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
F + Y+L EE+G+G F + L GQ+ A K+I +
Sbjct: 20 FQSMYQLFEELGKGAFSVV---RRCVKVLAGQEYAAKII----------------NTKKL 60
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
+ D + + RE +I R L H N+V+ +D+ ++ + Y++ +L GGE
Sbjct: 61 SARDH------------QKLEREARICRLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGE 107
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L + I++R YSE DA + QIL V CH GVVHRDLKPEN L SK + +++K
Sbjct: 108 LFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLA 166
Query: 299 DFGLSDYVKPDER-LNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWA 356
DFGL+ V+ +++ G+ Y++PEVL + YG D+W+ GVI YILL G PFW
Sbjct: 167 DFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 226
Query: 357 RTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH 416
+ +++ + F W +++PEA D + ++L + KR+TAA+AL HPW+ SH
Sbjct: 227 EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI--SH 284
Query: 417 DVKIPSDM 424
+ S M
Sbjct: 285 RSTVASCM 292
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 164/328 (50%), Gaps = 38/328 (11%)
Query: 94 PNEASIPEGNESDIGLDKNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVA 153
P+ AS+ G + G + S +F +Y++ EE+G+G F V
Sbjct: 2 PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFS----------------VV 45
Query: 154 VKVIPKMIGVIFLQ--VHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGH 211
+ + K G+ F ++ K F L+ RE +I R L H
Sbjct: 46 RRCVHKTTGLEFAAKIINTKKLSARDFQKLE-----------------REARICRKLQ-H 87
Query: 212 KNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHF 271
N+V+ +D+ +++ Y+V +L GGEL + I++R YSE DA + QIL +A+CH
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHS 146
Query: 272 QGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS- 330
G+VHR+LKPEN L SK + +++K DFGL+ V E + G+ Y++PEVL +
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 331 YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVK 390
Y D+W+ GVI YILL G PFW + ++ + + W +++PEA +
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266
Query: 391 RLLNKDYRKRLTAAQALSHPWLANSHDV 418
+L + +KR+TA QAL PW+ N V
Sbjct: 267 SMLTVNPKKRITADQALKVPWICNRERV 294
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 133/225 (59%), Gaps = 4/225 (1%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
+ + RE +I R L H N+V+ +D+ ++ Y+V +L GGEL + I++R YSE DA
Sbjct: 48 QKLEREARICRLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-YYSEADA 105
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER-LND 314
+ QIL V CH G+VHRDLKPEN L SK + +++K DFGL+ V+ D++
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 315 IVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
G+ Y++PEVL + YG DMW+ GVI YILL G PFW + +++ + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
W +++PEA D + ++L + KR+TA++AL HPW+ V
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTV 270
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 150/293 (51%), Gaps = 31/293 (10%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
Y++GEE+G G F + K G + A K I K Q +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKR------QSRASRR--------- 55
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
++ E++ REV ILR + H N++ +D YE+ ++ +++EL GGEL D
Sbjct: 56 ---------GVSREEIEREVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFD- 104
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDFG 301
L++ SEE+A + QIL V + H + + H DLKPEN + K +K IDFG
Sbjct: 105 FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
L+ ++ +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+ FDE + S A DF+++LL K+ RKRLT +AL HPW+
Sbjct: 225 ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 150/293 (51%), Gaps = 31/293 (10%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
Y++GEE+G G F + K G + A K I K Q +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKR------QSRASRR--------- 55
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
++ E++ REV ILR + H N++ +D YE+ ++ +++EL GGEL D
Sbjct: 56 ---------GVSREEIEREVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFD- 104
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDFG 301
L++ SEE+A + QIL V + H + + H DLKPEN + K +K IDFG
Sbjct: 105 FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
L+ ++ +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+ FDE + S A DF+++LL K+ RKRLT +AL HPW+
Sbjct: 225 ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 150/293 (51%), Gaps = 31/293 (10%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
Y++GEE+G G F + K G + A K I K Q +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKR------QSRASRR--------- 55
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
++ E++ REV ILR + H N++ +D YE+ ++ +++EL GGEL D
Sbjct: 56 ---------GVSREEIEREVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFD- 104
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDFG 301
L++ SEE+A + QIL V + H + + H DLKPEN + K +K IDFG
Sbjct: 105 FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
L+ ++ +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+ FDE + S A DF+++LL K+ RKRLT +AL HPW+
Sbjct: 225 ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 150/293 (51%), Gaps = 31/293 (10%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
Y++GEE+G G F + K G + A K I K Q +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKR------QSRASRR--------- 55
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
++ E++ REV ILR + H N++ +D YE+ ++ +++EL GGEL D
Sbjct: 56 ---------GVSREEIEREVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFD- 104
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDFG 301
L++ SEE+A + QIL V + H + + H DLKPEN + K +K IDFG
Sbjct: 105 FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
L+ ++ +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+ FDE + S A DF+++LL K+ RKRLT +AL HPW+
Sbjct: 225 ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
Y++GEE+G G F + K G + A K I K Q +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKST---GLEYAAKFIKKR------QSRASRR--------- 55
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ E++ REV ILR + H N++ +D YE+ ++ +++EL GGEL D
Sbjct: 56 ---------GVCREEIEREVSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFD- 104
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDFG 301
L++ SEE+A + QIL V + H + + H DLKPEN + K +K IDFG
Sbjct: 105 FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
L+ ++ +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+ FDE + S A DF+++LL K+ RKRLT +AL HPW+
Sbjct: 225 ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 150/293 (51%), Gaps = 31/293 (10%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
Y++GEE+G G F + K G + A K I K Q +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKR------QSRASRR--------- 55
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
++ E++ REV ILR + H N++ +D YE+ ++ +++EL GGEL D
Sbjct: 56 ---------GVSREEIEREVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFD- 104
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDFG 301
L++ SEE+A + QIL V + H + + H DLKPEN + K +K IDFG
Sbjct: 105 FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
L+ ++ +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+ FDE + S A DF+++LL K+ RKRLT +AL HPW+
Sbjct: 225 ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 155/305 (50%), Gaps = 39/305 (12%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y++ EE+G G FG V + + K G +F+ K N + L
Sbjct: 52 YYDILEELGSGAFG----------------VVHRCVEKATGRVFVA----KFINTPYP-L 90
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
D+Y V+ E+ I+ L H L+ +DA+ED + +++E GGEL D
Sbjct: 91 DKYT------------VKNEISIMNQLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFD 137
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
RI + K SE + M Q + H +VH D+KPEN + +K+ SS+K IDFG
Sbjct: 138 RIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA-SSVKIIDFG 196
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTES 360
L+ + PDE + +A + APE++ R G DMW+IGV+ Y+LL G PF +
Sbjct: 197 LATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL 256
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD--- 417
+ V + D FDE + S+SPEA DF+K LL K+ RKRLT AL HPWL H
Sbjct: 257 ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLT 316
Query: 418 VKIPS 422
+IPS
Sbjct: 317 SRIPS 321
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 152/306 (49%), Gaps = 40/306 (13%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
HY++ EE+G G FG + G + A K + HE+ +
Sbjct: 52 HYDIHEELGTGAFGVVHRVTER---ATGNNFAAKFV------------MTPHESDK---- 92
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
E VR+E++ + L H LV +DA+EDD+ + ++ E GGEL +
Sbjct: 93 --------------ETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 137
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
++ K SE++A M Q+ + H VH DLKPEN +FT+K N LK IDFG
Sbjct: 138 KVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN-ELKLIDFG 196
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
L+ ++ P + + G+A + APEV + G DMWS+GV++YILL G PF +
Sbjct: 197 LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD 256
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL----ANSH 416
R V D + D++ + +S + DF+++LL D R+T QAL HPWL A
Sbjct: 257 ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGR 316
Query: 417 DVKIPS 422
D +IPS
Sbjct: 317 DSQIPS 322
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 152/306 (49%), Gaps = 40/306 (13%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
HY++ EE+G G FG + G + A K + HE+ +
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERA---TGNNFAAKFV------------MTPHESDK---- 198
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
E VR+E++ + L H LV +DA+EDD+ + ++ E GGEL +
Sbjct: 199 --------------ETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 243
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
++ K SE++A M Q+ + H VH DLKPEN +FT+K N LK IDFG
Sbjct: 244 KVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSN-ELKLIDFG 302
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
L+ ++ P + + G+A + APEV + G DMWS+GV++YILL G PF +
Sbjct: 303 LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD 362
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL----ANSH 416
R V D + D++ + +S + DF+++LL D R+T QAL HPWL A
Sbjct: 363 ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGR 422
Query: 417 DVKIPS 422
D +IPS
Sbjct: 423 DSQIPS 428
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 161/309 (52%), Gaps = 37/309 (11%)
Query: 118 QFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQ 177
+F Y+L EE+G+G F + L GQ+ A +I +
Sbjct: 8 RFTEEYQLFEELGKGAFSVV---RRCVKVLAGQEYAAMII----------------NTKK 48
Query: 178 FTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG 237
+ D + + RE +I R L H N+V+ +D+ ++ + Y++ +L GG
Sbjct: 49 LSARDH------------QKLEREARICRLLK-HPNIVRLHDSISEEGHHYLIFDLVTGG 95
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
EL + I++R YSE DA + QIL V CH GVVHR+LKPEN L SK + +++K
Sbjct: 96 ELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKL 154
Query: 298 IDFGLSDYVKPDER-LNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFW 355
DFGL+ V+ +++ G+ Y++PEVL + YG D+W+ GVI YILL G PFW
Sbjct: 155 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW 214
Query: 356 ARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
+ +++ + F W +++PEA D + ++L + KR+TAA+AL HPW+ S
Sbjct: 215 DEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI--S 272
Query: 416 HDVKIPSDM 424
H + S M
Sbjct: 273 HRSTVASCM 281
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 11/224 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E +EV ILR ++GH N++Q D YE + ++V +L K GEL D L+ SE++
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD-YLTEKVTLSEKET 126
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+ +M +L V+ H +VHRDLKPEN L +++ ++K DFG S + P E+L ++
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREV 183
Query: 316 VGSAYYVAPEVL-------HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
G+ Y+APE++ H YG E DMWS GVI Y LL GS PFW R + + R ++
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 243
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ F W S D V R L +KR TA +AL+HP+
Sbjct: 244 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 11/224 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E +EV ILR ++GH N++Q D YE + ++V +L K GEL D L+ SE++
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD-YLTEKVTLSEKET 113
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+ +M +L V+ H +VHRDLKPEN L +++ ++K DFG S + P E+L ++
Sbjct: 114 RKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREV 170
Query: 316 VGSAYYVAPEVL-------HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
G+ Y+APE++ H YG E DMWS GVI Y LL GS PFW R + + R ++
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 230
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ F W S D V R L +KR TA +AL+HP+
Sbjct: 231 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 124/224 (55%), Gaps = 11/224 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E +EV ILR ++GH N++Q D YE + ++V +L K GEL D L+ SE++
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD-YLTEKVTLSEKET 126
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+ +M +L V+ H +VHRDLKPEN L +++ ++K DFG S + P E+L +
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSV 183
Query: 316 VGSAYYVAPEVL-------HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
G+ Y+APE++ H YG E DMWS GVI Y LL GS PFW R + + R ++
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 243
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ F W S D V R L +KR TA +AL+HP+
Sbjct: 244 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 133/225 (59%), Gaps = 4/225 (1%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
+ + RE +I R L H N+V+ +D+ ++ Y+V +L GGEL + I++R YSE DA
Sbjct: 48 QKLEREARICRLLK-HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-YYSEADA 105
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER-LND 314
+ QIL V CH GVVHRDLKPEN L SK + +++K DFGL+ V+ D++
Sbjct: 106 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 315 IVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
G+ Y++PEVL + +YG D+W+ GVI YILL G PFW + +++ + F
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 225
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
W +++PEA + + ++L + KR+TA +AL HPW+ V
Sbjct: 226 PSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTV 270
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 38/306 (12%)
Query: 116 SKQFVAHYELGEEVGRGHFGYT--CSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
S +F +Y++ EE+G+G F C K G + A K+I
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTT-----GLEFAAKIINTK------------- 42
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+A + + RE +I R L H N+V+ +D+ +++ Y+V +L
Sbjct: 43 ---------------KLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDL 86
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENS 293
GGEL + I++R YSE DA + QIL +A+CH G+VHR+LKPEN L SK + +
Sbjct: 87 VTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 294 SLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSR 352
++K DFGL+ V E + G+ Y++PEVL + Y D+W+ GVI YILL G
Sbjct: 146 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 353 PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
PFW + ++ + + W +++PEA + +L + +KR+TA QAL PW+
Sbjct: 206 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
Query: 413 ANSHDV 418
N V
Sbjct: 266 CNRERV 271
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 153/302 (50%), Gaps = 38/302 (12%)
Query: 116 SKQFVAHYELGEEVGRGHFGYT--CSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
S +F +Y++ EE+G+G F C K G + A K+I
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTT-----GLEFAAKIINTK------------- 42
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+A + + RE +I R L H N+V+ +D+ +++ Y+V +L
Sbjct: 43 ---------------KLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDL 86
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENS 293
GGEL + I++R YSE DA + QIL +A+CH G+VHR+LKPEN L SK + +
Sbjct: 87 VTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 294 SLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSR 352
++K DFGL+ V E + G+ Y++PEVL + Y D+W+ GVI YILL G
Sbjct: 146 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 353 PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
PFW + ++ + + W +++PEA + +L + +KR+TA QAL PW+
Sbjct: 206 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
Query: 413 AN 414
N
Sbjct: 266 CN 267
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 132/229 (57%), Gaps = 3/229 (1%)
Query: 191 TAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY 250
+A + + RE +I R L H N+V+ +D+ +++ Y+V +L GGEL + I++R Y
Sbjct: 44 SARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-Y 101
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
SE DA + QIL +A+CH G+VHR+LKPEN L SK + +++K DFGL+ V E
Sbjct: 102 SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 161
Query: 311 RLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ G+ Y++PEVL + Y D+W+ GVI YILL G PFW + ++ +
Sbjct: 162 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 221
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
+ W +++PEA + +L + +KR+TA QAL PW+ N V
Sbjct: 222 AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV 270
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 162/309 (52%), Gaps = 49/309 (15%)
Query: 118 QFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQ 177
+ + +YEL E +G G F K L G+ VA+K++ K
Sbjct: 7 ELLKYYELHETIGTGGFA---KVKLACHILTGEMVAIKIMDKN----------------- 46
Query: 178 FTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG 237
T + ++ E++ L+ L H+++ Q Y E + I++V+E C GG
Sbjct: 47 ------------TLGSDLPRIKTEIEALKNLR-HQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
EL D I+S+ + SEE+ ++V QI+S VA+ H QG HRDLKPEN LF +E LK
Sbjct: 94 ELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLF---DEYHKLKL 149
Query: 298 IDFGLSDYVKP----DERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGS 351
IDFGL KP D L GS Y APE++ +SY G+EAD+WS+G++ Y+L+CG
Sbjct: 150 IDFGLC--AKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGF 207
Query: 352 RPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
PF +++ +++ +D W LSP +I ++++L D +KR++ L+HPW
Sbjct: 208 LPFDDDNVMALYKKIMRG--KYDVPKW--LSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263
Query: 412 LANSHDVKI 420
+ ++ +
Sbjct: 264 IMQDYNYPV 272
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 53
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 54 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 103 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 161
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 162 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 221
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 222 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 53
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 54 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 103 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 161
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 162 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 221
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 222 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGKFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 130/220 (59%), Gaps = 3/220 (1%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E+V+ E+ ++ L H NL+Q YDA+E ++I +VME GGEL DRI+ +E D
Sbjct: 131 EEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT 189
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+ M QI + H ++H DLKPEN L +++ +K IDFGL+ KP E+L
Sbjct: 190 ILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDA-KQIKIIDFGLARRYKPREKLKVN 248
Query: 316 VGSAYYVAPEVLHRSYGT-EADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ ++APEV++ + + DMWS+GVIAY+LL G PF ++ +L +
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE 308
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+ + +S EA +F+ +LL K+ R++A++AL HPWL++
Sbjct: 309 DEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGVFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ +++EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 148/293 (50%), Gaps = 31/293 (10%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y+ GEE+G G F + K L+ A K I K + +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKR------RTKSSRR-------- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
++ ED+ REV IL+ + H N++ ++ YE+ ++ ++ EL GGEL D
Sbjct: 55 ----------GVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFD 103
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE-ENSSLKAIDF 300
L+ +EE+A + QIL+ V + H + H DLKPEN + + +K IDF
Sbjct: 104 -FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 301 GLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTE 359
GL+ + +I G+ +VAPE++ + G EADMWSIGVI YILL G+ PF T+
Sbjct: 163 GLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222
Query: 360 SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
V + F++ + + S A DF++RLL KD +KR+T +L HPW+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 130/225 (57%), Gaps = 4/225 (1%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
+ + RE +I R L H N+V+ +D+ ++ Y+V +L GGEL + I++R YSE DA
Sbjct: 75 QKLEREARICRLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-YYSEADA 132
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER-LND 314
+ QIL V H +VHRDLKPEN L SK + +++K DFGL+ V+ +++
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 315 IVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
G+ Y++PEVL + YG D+W+ GVI YILL G PFW + +++ + F
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 252
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
W +++PEA + + ++L + KR+TA QAL HPW+ V
Sbjct: 253 PSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTV 297
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 130/227 (57%), Gaps = 10/227 (4%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
+ ++E+ L+ GH N+V+ ++ + D + ++VMEL GGEL +RI + +SE +A
Sbjct: 51 NTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEAS 109
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER-LNDI 315
+M +++S V+ H GVVHRDLKPEN LFT + +N +K IDFG + PD + L
Sbjct: 110 YIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP 169
Query: 316 VGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTES-------GIFRAVL 367
+ +Y APE+L+++ Y D+WS+GVI Y +L G PF + S I + +
Sbjct: 170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK 229
Query: 368 KADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
K D SF+ W ++S EA D ++ LL D KRL + + WL +
Sbjct: 230 KGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD 276
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 151/299 (50%), Gaps = 41/299 (13%)
Query: 117 KQFVAHYELGEEVGRGHFG--YTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHE 174
K+ Y + E++GRG FG + C + K + + V VK +++
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL------------- 47
Query: 175 NHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELC 234
V++E+ IL + H+N++ ++++E + + ++ E
Sbjct: 48 -----------------------VKKEISILN-IARHRNILHLHESFESMEELVMIFEFI 83
Query: 235 KGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSS 294
G ++ +RI + + +E + + Q+ + F H + H D++PEN ++ ++ +S+
Sbjct: 84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR-SST 142
Query: 295 LKAIDFGLSDYVKPDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRP 353
+K I+FG + +KP + + + Y APEV H T DMWS+G + Y+LL G P
Sbjct: 143 IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
F A T I ++ A+ +FDE + +S EA+DFV RLL K+ + R+TA++AL HPWL
Sbjct: 203 FLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL 261
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 149/295 (50%), Gaps = 35/295 (11%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
YEL E +G+G F ++ GQ AVK++ + +FT
Sbjct: 26 YELCEVIGKGAFSVVRRCINRE---TGQQFAVKIV----------------DVAKFT--- 63
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ ++ ED++RE I L H ++V+ + Y D +Y+V E G +L
Sbjct: 64 ------SSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFE 116
Query: 243 ILSR---GGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
I+ R G YSE A M QIL + +CH ++HRD+KPEN L SKE ++ +K D
Sbjct: 117 IVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGD 176
Query: 300 FGLSDYVKPDERL-NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWAR 357
FG++ + + VG+ +++APEV+ R YG D+W GVI +ILL G PF+
Sbjct: 177 FGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG- 235
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
T+ +F ++K + W +S A D V+R+L D +R+T +AL+HPWL
Sbjct: 236 TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 146/313 (46%), Gaps = 60/313 (19%)
Query: 116 SKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHEN 175
S QF YE+ E++G G + C K + + AVK+I K
Sbjct: 17 SIQFTDGYEVKEDIGVGSYS-VCKRCIHKAT--NMEFAVKIIDK---------------- 57
Query: 176 HQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCK 235
+ D E++IL H N++ D Y+D +Y+V EL K
Sbjct: 58 ------------------SKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK 99
Query: 236 GGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEEN-SS 294
GGELLD+IL R +SE +A V+ I V + H QGVVHRDLKP N L+ + N S
Sbjct: 100 GGELLDKIL-RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPES 158
Query: 295 LKAIDFGLSDYVKPDE-RLNDIVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSR 352
++ DFG + ++ + L +A +VAPEVL R Y D+WS+GV+ Y +L G
Sbjct: 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT 218
Query: 353 PF-----------WARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
PF AR SG F S W S+S A D V ++L+ D +RL
Sbjct: 219 PFANGPDDTPEEILARIGSGKF--------SLSGGYWNSVSDTAKDLVSKMLHVDPHQRL 270
Query: 402 TAAQALSHPWLAN 414
TAA L HPW+ +
Sbjct: 271 TAALVLRHPWIVH 283
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 123/227 (54%), Gaps = 11/227 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDN----IYIVMELCKGGELLDRILSRGGK-YSEE 253
R+EV +G ++V D YE+ + + I+ME +GGEL RI RG + ++E
Sbjct: 50 RQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTER 109
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + F H + HRD+KPEN L+TSKE+++ LK DFG + + L
Sbjct: 110 EAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA-LQ 168
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWART----ESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ T G+ R +
Sbjct: 169 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL 228
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
F W +S +A ++ LL D +RLT Q ++HPW+ S
Sbjct: 229 GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 275
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 123/227 (54%), Gaps = 11/227 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDN----IYIVMELCKGGELLDRILSRGGK-YSEE 253
R+EV +G ++V D YE+ + + I+ME +GGEL RI RG + ++E
Sbjct: 69 RQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTER 128
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + F H + HRD+KPEN L+TSKE+++ LK DFG + + L
Sbjct: 129 EAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA-LQ 187
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWART----ESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ T G+ R +
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL 247
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
F W +S +A ++ LL D +RLT Q ++HPW+ S
Sbjct: 248 GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 144/313 (46%), Gaps = 60/313 (19%)
Query: 116 SKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHEN 175
S QF YE+ E++G G + C K + + AVK+I K
Sbjct: 17 SIQFTDGYEVKEDIGVGSYS-VCKRCIHKAT--NXEFAVKIIDK---------------- 57
Query: 176 HQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCK 235
+ D E++IL H N++ D Y+D +Y+V EL K
Sbjct: 58 ------------------SKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXK 99
Query: 236 GGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEEN-SS 294
GGELLD+IL R +SE +A V+ I V + H QGVVHRDLKP N L+ + N S
Sbjct: 100 GGELLDKIL-RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPES 158
Query: 295 LKAIDFGLSDYVKPDE-RLNDIVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSR 352
++ DFG + ++ + L +A +VAPEVL R Y D+WS+GV+ Y L G
Sbjct: 159 IRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYT 218
Query: 353 PF-----------WARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
PF AR SG F S W S+S A D V + L+ D +RL
Sbjct: 219 PFANGPDDTPEEILARIGSGKF--------SLSGGYWNSVSDTAKDLVSKXLHVDPHQRL 270
Query: 402 TAAQALSHPWLAN 414
TAA L HPW+ +
Sbjct: 271 TAALVLRHPWIVH 283
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 127/238 (53%), Gaps = 9/238 (3%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
D E++IL H N++ D Y+D ++Y+V EL +GGELLD+IL R +SE +A
Sbjct: 66 DPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL-RQKFFSEREAS 124
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEEN-SSLKAIDFGLSDYVKPDE-RLND 314
V+ I V + H QGVVHRDLKP N L+ + N L+ DFG + ++ + L
Sbjct: 125 FVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 315 IVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFW---ARTESGIFRAVLKAD 370
+A +VAPEVL R Y D+WS+G++ Y +L G PF + T I +
Sbjct: 185 PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGK 244
Query: 371 PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDMIVYK 428
+ W ++S A D V ++L+ D +RLTA Q L HPW+ K+P + ++
Sbjct: 245 FTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKD--KLPQSQLSHQ 300
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 127/238 (53%), Gaps = 9/238 (3%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
D E++IL H N++ D Y+D ++Y+V EL +GGELLD+IL R +SE +A
Sbjct: 66 DPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL-RQKFFSEREAS 124
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEEN-SSLKAIDFGLSDYVKPDE-RLND 314
V+ I V + H QGVVHRDLKP N L+ + N L+ DFG + ++ + L
Sbjct: 125 FVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 315 IVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFW---ARTESGIFRAVLKAD 370
+A +VAPEVL R Y D+WS+G++ Y +L G PF + T I +
Sbjct: 185 PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGK 244
Query: 371 PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDMIVYK 428
+ W ++S A D V ++L+ D +RLTA Q L HPW+ K+P + ++
Sbjct: 245 FTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKD--KLPQSQLSHQ 300
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 137/270 (50%), Gaps = 49/270 (18%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR----ILSRGGKY 250
+E ++ EV++++ L H N+ + Y+ YED+ I +VMELC GG LLD+ I GK
Sbjct: 72 VERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKC 130
Query: 251 SEEDAKI-----------------------------------VMVQILSVVAFCHFQGVV 275
+ + K +M QI S + + H QG+
Sbjct: 131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGIC 190
Query: 276 HRDLKPENFLFTSKEENSSLKAIDFGLS-DYVKPDER----LNDIVGSAYYVAPEVLH-- 328
HRD+KPENFLF S ++ +K +DFGLS ++ K + + G+ Y+VAPEVL+
Sbjct: 191 HRDIKPENFLF-STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249
Query: 329 -RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAID 387
SYG + D WS GV+ ++LL G+ PF ++ VL F+ + LSP A D
Sbjct: 250 NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARD 309
Query: 388 FVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ LLN++ +R A +AL HPW++ D
Sbjct: 310 LLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 30/244 (12%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V REV+ L G+KN+++ + +EDD Y+V E +GG +L I + ++E +A
Sbjct: 57 VFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREASR 115
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV- 316
V+ + + + F H +G+ HRDLKPEN L S E+ S +K DF L +K + I
Sbjct: 116 VVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITT 175
Query: 317 -------GSAYYVAPEVLH------RSYGTEADMWSIGVIAYILLCGSRPF--------- 354
GSA Y+APEV+ Y D+WS+GV+ YI+L G PF
Sbjct: 176 PELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCG 235
Query: 355 WARTE------SGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALS 408
W R E + +F ++ + F + W +S EA D + +LL +D ++RL+AAQ L
Sbjct: 236 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 409 HPWL 412
HPW+
Sbjct: 296 HPWV 299
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
+V E++IL+ L H +++ + + D ++ YIV+EL +GGEL D+++ + E K
Sbjct: 67 NVETEIEILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCK 123
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
+ Q+L V + H G++HRDLKPEN L +S+EE+ +K DFG S + + +
Sbjct: 124 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 183
Query: 317 GSAYYVAPEVL----HRSYGTEADMWSIGVIAYILLCGSRPFWA-RTESGIFRAVLKADP 371
G+ Y+APEVL Y D WS+GVI +I L G PF RT+ + +
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 243
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+F W +S +A+D VK+LL D + R T +AL HPWL +
Sbjct: 244 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
+V E++IL+ L H +++ + + D ++ YIV+EL +GGEL D+++ + E K
Sbjct: 61 NVETEIEILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCK 117
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
+ Q+L V + H G++HRDLKPEN L +S+EE+ +K DFG S + + +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 317 GSAYYVAPEVL----HRSYGTEADMWSIGVIAYILLCGSRPFWA-RTESGIFRAVLKADP 371
G+ Y+APEVL Y D WS+GVI +I L G PF RT+ + +
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 237
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+F W +S +A+D VK+LL D + R T +AL HPWL +
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
+V E++IL+ L H +++ + + D ++ YIV+EL +GGEL D+++ + E K
Sbjct: 61 NVETEIEILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCK 117
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
+ Q+L V + H G++HRDLKPEN L +S+EE+ +K DFG S + + +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 317 GSAYYVAPEVL----HRSYGTEADMWSIGVIAYILLCGSRPFWA-RTESGIFRAVLKADP 371
G+ Y+APEVL Y D WS+GVI +I L G PF RT+ + +
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 237
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+F W +S +A+D VK+LL D + R T +AL HPWL +
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
+V E++IL+ L H +++ + + D ++ YIV+EL +GGEL D+++ + E K
Sbjct: 60 NVETEIEILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCK 116
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
+ Q+L V + H G++HRDLKPEN L +S+EE+ +K DFG S + + +
Sbjct: 117 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 176
Query: 317 GSAYYVAPEVL----HRSYGTEADMWSIGVIAYILLCGSRPFWA-RTESGIFRAVLKADP 371
G+ Y+APEVL Y D WS+GVI +I L G PF RT+ + +
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 236
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+F W +S +A+D VK+LL D + R T +AL HPWL +
Sbjct: 237 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
+V E++IL+ L H +++ + + D ++ YIV+EL +GGEL D+++ + E K
Sbjct: 61 NVETEIEILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCK 117
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
+ Q+L V + H G++HRDLKPEN L +S+EE+ +K DFG S + + +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 317 GSAYYVAPEVL----HRSYGTEADMWSIGVIAYILLCGSRPFWA-RTESGIFRAVLKADP 371
G+ Y+APEVL Y D WS+GVI +I L G PF RT+ + +
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 237
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+F W +S +A+D VK+LL D + R T +AL HPWL +
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 35/295 (11%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
YEL E +G+G F ++ GQ AVK++ + +FT
Sbjct: 28 YELCEVIGKGPFSVVRRCINRE---TGQQFAVKIV----------------DVAKFT--- 65
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ ++ ED++RE I L H ++V+ + Y D +Y+V E G +L
Sbjct: 66 ------SSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFE 118
Query: 243 ILSR---GGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
I+ R G YSE A M QIL + +CH ++HRD+KP L SKE ++ +K
Sbjct: 119 IVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGG 178
Query: 300 FGLSDYVKPDERL-NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWAR 357
FG++ + + VG+ +++APEV+ R YG D+W GVI +ILL G PF+
Sbjct: 179 FGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG- 237
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
T+ +F ++K + W +S A D V+R+L D +R+T +AL+HPWL
Sbjct: 238 TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 292
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 10/230 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 56 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 115
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG + L
Sbjct: 116 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 175
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLK 368
+ + YYVAPEVL Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 176 EPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 235
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 236 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 285
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 35/295 (11%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
YEL E +G+G F ++ GQ AVK++ + +FT
Sbjct: 26 YELCEVIGKGPFSVVRRCINRE---TGQQFAVKIV----------------DVAKFT--- 63
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ ++ ED++RE I L H ++V+ + Y D +Y+V E G +L
Sbjct: 64 ------SSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFE 116
Query: 243 ILSR---GGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
I+ R G YSE A M QIL + +CH ++HRD+KP L SKE ++ +K
Sbjct: 117 IVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGG 176
Query: 300 FGLSDYVKPDERL-NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWAR 357
FG++ + + VG+ +++APEV+ R YG D+W GVI +ILL G PF+
Sbjct: 177 FGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG- 235
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
T+ +F ++K + W +S A D V+R+L D +R+T +AL+HPWL
Sbjct: 236 TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 72 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 131
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG + L
Sbjct: 132 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 191
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 192 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 251
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 252 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 301
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 62 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 121
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG + L
Sbjct: 122 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 181
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 182 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 241
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 242 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 291
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 57 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 116
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG + L
Sbjct: 117 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 176
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 177 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 236
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 237 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 286
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 118/233 (50%), Gaps = 16/233 (6%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDNIY-------IVMELCKGGELLDRILSRGGK-Y 250
RREV++ + ++V+ D YE N+Y IVME GGEL RI RG + +
Sbjct: 102 RREVELHWRASQCPHIVRIVDVYE---NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 158
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+E +A +M I + + H + HRD+KPEN L+TSK N+ LK DFG +
Sbjct: 159 TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218
Query: 311 RLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRA 365
L + YYVAPEVL Y DMWS+GVI YILLCG PF++ G+
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 278
Query: 366 VLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
+ F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 279 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 331
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 63 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 122
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG + L
Sbjct: 123 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 182
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 183 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 242
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 243 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 292
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 56 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 115
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG + L
Sbjct: 116 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 175
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 176 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 235
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 236 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 285
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 64 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 123
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG + L
Sbjct: 124 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 183
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 184 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 243
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 244 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 293
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 108 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 167
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG + L
Sbjct: 168 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 227
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 228 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 287
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 288 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 337
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 58 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG + L
Sbjct: 118 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 178 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 237
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 238 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 287
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
+V E++IL+ L H +++ + + D ++ YIV+EL +GGEL D+++ + E K
Sbjct: 200 NVETEIEILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCK 256
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
+ Q+L V + H G++HRDLKPEN L +S+EE+ +K DFG S + + +
Sbjct: 257 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 316
Query: 317 GSAYYVAPEVL----HRSYGTEADMWSIGVIAYILLCGSRPFWA-RTESGIFRAVLKADP 371
G+ Y+APEVL Y D WS+GVI +I L G PF RT+ + +
Sbjct: 317 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 376
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+F W +S +A+D VK+LL D + R T +AL HPWL +
Sbjct: 377 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 58 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG + L
Sbjct: 118 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLK 368
+ YYVAPEVL Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 178 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 237
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 238 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 287
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 143/295 (48%), Gaps = 41/295 (13%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ HY LG+ +G G FG K K L G VAVK++ + +
Sbjct: 15 IGHYILGDTLGVGTFG---KVKVGKHELTGHKVAVKILNR----------------QKIR 55
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
LD + +RRE++ L+ L H ++++ Y +I++VME GGEL
Sbjct: 56 SLD-----------VVGKIRREIQNLK-LFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D I + G+ E++++ + QILS V +CH VVHRDLKPEN L + + + K D
Sbjct: 104 FDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIAD 159
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FGLS+ + E L GS Y APEV+ R Y G E D+WS GVI Y LLCG+ PF
Sbjct: 160 FGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+F+ + D F + L+P I +K +L D KR T H W
Sbjct: 220 HVPTLFKKI--CDGIFYTPQY--LNPSVISLLKHMLQVDPMKRATIKDIREHEWF 270
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
+V E++IL+ L H +++ + + D ++ YIV+EL +GGEL D+++ + E K
Sbjct: 186 NVETEIEILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCK 242
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
+ Q+L V + H G++HRDLKPEN L +S+EE+ +K DFG S + + +
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 302
Query: 317 GSAYYVAPEVL----HRSYGTEADMWSIGVIAYILLCGSRPFWA-RTESGIFRAVLKADP 371
G+ Y+APEVL Y D WS+GVI +I L G PF RT+ + +
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 362
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+F W +S +A+D VK+LL D + R T +AL HPWL +
Sbjct: 363 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 139/261 (53%), Gaps = 31/261 (11%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V REV++L GH+N+++ + +E++D Y+V E +GG +L I R ++E +A +
Sbjct: 57 VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASV 115
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI-- 315
V+ + S + F H +G+ HRDLKPEN L + S +K DFGL +K + + I
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 316 ------VGSAYYVAPEVLH------RSYGTEADMWSIGVIAYILLCGSRPF--------- 354
GSA Y+APEV+ Y D+WS+GVI YILL G PF
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
Query: 355 WARTESG------IFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALS 408
W R E+ +F ++ + F + W +S A D + +LL +D ++RL+AAQ L
Sbjct: 236 WDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 409 HPWLAN-SHDVKIPSDMIVYK 428
HPW+ + + +P+ M++ +
Sbjct: 296 HPWVQGCAPENTLPTPMVLQR 316
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 155/305 (50%), Gaps = 46/305 (15%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +++G +G+G F A++ G +VA+K+I K
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIH---TGLEVAIKMIDKKA------------------ 48
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
M A ++ V+ EVKI L H ++++ Y+ +ED + +Y+V+E+C GE+
Sbjct: 49 ---------MYKAGMVQRVQNEVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEM 98
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
+ +R +SE +A+ M QI++ + + H G++HRDL N L T N ++K D
Sbjct: 99 NRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIAD 155
Query: 300 FGLSDYVK-PDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWAR 357
FGL+ +K P E+ + G+ Y++PE+ RS +G E+D+WS+G + Y LL G PF
Sbjct: 156 FGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215
Query: 358 TESGIFRAVLKAD---PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
T V+ AD PSF LS EA D + +LL ++ RL+ + L HP+++
Sbjct: 216 TVKNTLNKVVLADYEMPSF-------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR 268
Query: 415 SHDVK 419
+ K
Sbjct: 269 NSSTK 273
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 138/261 (52%), Gaps = 31/261 (11%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V REV++L GH+N+++ + +E++D Y+V E +GG +L I R ++E +A +
Sbjct: 57 VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASV 115
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI-- 315
V+ + S + F H +G+ HRDLKPEN L + S +K DF L +K + + I
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 316 ------VGSAYYVAPEVLH------RSYGTEADMWSIGVIAYILLCGSRPF--------- 354
GSA Y+APEV+ Y D+WS+GVI YILL G PF
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
Query: 355 WARTESG------IFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALS 408
W R E+ +F ++ + F + W +S A D + +LL +D ++RL+AAQ L
Sbjct: 236 WDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 409 HPWLAN-SHDVKIPSDMIVYK 428
HPW+ + + +P+ M++ +
Sbjct: 296 HPWVQGCAPENTLPTPMVLQR 316
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 151/300 (50%), Gaps = 42/300 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y L + +G+G+F K + L G++VAV++I K
Sbjct: 13 IGNYRLLKTIGKGNF---AKVKLARHILTGKEVAVRIIDKT------------------- 50
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ +++ + REV+I++ L H N+V+ ++ E + +Y+VME GGE+
Sbjct: 51 ---------QLNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D +++ G + E++A+ QI+S V +CH + +VHRDLK EN L + + ++K D
Sbjct: 101 FDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIAD 156
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FG S+ +L++ GS Y APE+ + Y G E D+WS+GVI Y L+ GS PF +
Sbjct: 157 FGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ VL+ P+ +S + + +K+ L + KR T Q + W+ H+
Sbjct: 217 NLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 112/233 (48%), Gaps = 16/233 (6%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDNIY-------IVMELCKGGELLDRILSRGGK-Y 250
RREV++ + ++V+ D YE N+Y IV E GGEL RI RG + +
Sbjct: 102 RREVELHWRASQCPHIVRIVDVYE---NLYAGRKCLLIVXECLDGGELFSRIQDRGDQAF 158
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+E +A + I + + H + HRD+KPEN L+TSK N+ LK DFG +
Sbjct: 159 TEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218
Query: 311 RLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRA 365
L + YYVAPEVL Y D WS+GVI YILLCG PF++ G
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTR 278
Query: 366 VLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
+ F W +S E ++ LL + +R T + +HPW+ S V
Sbjct: 279 IRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKV 331
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 150/300 (50%), Gaps = 42/300 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y L + +G+G+F K + L G++VAVK+I K
Sbjct: 13 IGNYRLLKTIGKGNF---AKVKLARHILTGKEVAVKIIDKT------------------- 50
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ +++ + REV+I++ L H N+V+ ++ E + +Y+VME GGE+
Sbjct: 51 ---------QLNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D +++ G + E++A+ QI+S V +CH + +VHRDLK EN L + + ++K D
Sbjct: 101 FDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIAD 156
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FG S+ +L+ GS Y APE+ + Y G E D+WS+GVI Y L+ GS PF +
Sbjct: 157 FGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ VL+ P+ +S + + +K+ L + KR T Q + W+ H+
Sbjct: 217 NLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 150/300 (50%), Gaps = 42/300 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y L + +G+G+F K + L G++VAVK+I K
Sbjct: 13 IGNYRLLKTIGKGNF---AKVKLARHILTGKEVAVKIIDKT------------------- 50
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ +++ + REV+I++ L H N+V+ ++ E + +Y+VME GGE+
Sbjct: 51 ---------QLNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D +++ G + E++A+ QI+S V +CH + +VHRDLK EN L + + ++K D
Sbjct: 101 FDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIAD 156
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FG S+ +L+ GS Y APE+ + Y G E D+WS+GVI Y L+ GS PF +
Sbjct: 157 FGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ VL+ P+ +S + + +K+ L + KR T Q + W+ H+
Sbjct: 217 NLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 150/300 (50%), Gaps = 42/300 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y L + +G+G+F K + L G++VAV++I K
Sbjct: 13 IGNYRLLKTIGKGNF---AKVKLARHILTGKEVAVRIIDKT------------------- 50
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ +++ + REV+I++ L H N+V+ ++ E + +Y+VME GGE+
Sbjct: 51 ---------QLNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D +++ G + E++A+ QI+S V +CH + +VHRDLK EN L + + ++K D
Sbjct: 101 FDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIAD 156
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FG S+ +L+ GS Y APE+ + Y G E D+WS+GVI Y L+ GS PF +
Sbjct: 157 FGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ VL+ P+ +S + + +K+ L + KR T Q + W+ H+
Sbjct: 217 NLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 42/300 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y L + +G+G+F K + L G++VA+K+I K
Sbjct: 11 IGNYRLLKTIGKGNF---AKVKLARHILTGREVAIKIIDKT------------------- 48
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+++ + REV+I++ L H N+V+ ++ E + +Y++ME GGE+
Sbjct: 49 ---------QLNPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLYLIMEYASGGEV 98
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D +++ G + E++A+ QI+S V +CH + +VHRDLK EN L + + ++K D
Sbjct: 99 FDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA---DMNIKIAD 154
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FG S+ +L+ GS Y APE+ + Y G E D+WS+GVI Y L+ GS PF +
Sbjct: 155 FGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 214
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ VL+ P+ +S + + +KR L + KR T Q + W+ H+
Sbjct: 215 NLKELRERVLRGKYRI---PF-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 270
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 137/295 (46%), Gaps = 41/295 (13%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ HY LG+ +G G FG K + L G VAVK++ + +
Sbjct: 10 IGHYVLGDTLGVGTFG---KVKIGEHQLTGHKVAVKILNR----------------QKIR 50
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
LD + ++RE++ L+ L H ++++ Y + ++VME GGEL
Sbjct: 51 SLD-----------VVGKIKREIQNLK-LFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D I + G+ E +A+ + QILS V +CH VVHRDLKPEN L + + + K D
Sbjct: 99 FDYI-CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIAD 154
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FGLS+ + E L D GS Y APEV+ R Y G E D+WS GVI Y LLCG+ PF
Sbjct: 155 FGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+F+ + E L+ + +L D KR T H W
Sbjct: 215 HVPTLFKKIRGGVFYIPE----YLNRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 150/300 (50%), Gaps = 42/300 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y L + +G+G+F K + L G++VAVK+I K
Sbjct: 13 IGNYRLLKTIGKGNF---AKVKLARHILTGKEVAVKIIDKT------------------- 50
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ +++ + REV+I++ L H N+V+ ++ E + +Y+VME GGE+
Sbjct: 51 ---------QLNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D +++ G + E++A+ QI+S V +CH + +VHRDLK EN L + + ++K D
Sbjct: 101 FDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIAD 156
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FG S+ +L+ G+ Y APE+ + Y G E D+WS+GVI Y L+ GS PF +
Sbjct: 157 FGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ VL+ P+ +S + + +K+ L + KR T Q + W+ H+
Sbjct: 217 NLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 2/218 (0%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY-SEEDA 255
++ E+ +L ++ ++ YE+ I +++E GGE+ L + SE D
Sbjct: 74 EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV 133
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
++ QIL V + H +VH DLKP+N L +S +K +DFG+S + L +I
Sbjct: 134 IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI 193
Query: 316 VGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
+G+ Y+APE+L + T DMW+IG+IAY+LL + PF + + + + +
Sbjct: 194 MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS 253
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
E + S+S A DF++ LL K+ KR TA LSH WL
Sbjct: 254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 149/300 (49%), Gaps = 42/300 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y L + +G+G+F K + L G++VAVK+I K
Sbjct: 6 IGNYRLLKTIGKGNF---AKVKLARHILTGKEVAVKIIDKT------------------- 43
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ +++ + REV+I++ L H N+V+ ++ E + +Y+VME GGE+
Sbjct: 44 ---------QLNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 93
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D +++ G E++A+ QI+S V +CH + +VHRDLK EN L + + ++K D
Sbjct: 94 FDYLVAHGW-MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DMNIKIAD 149
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FG S+ +L+ GS Y APE+ + Y G E D+WS+GVI Y L+ GS PF +
Sbjct: 150 FGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 209
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ VL+ P+ +S + + +K+ L + KR T Q + W+ H+
Sbjct: 210 NLKELRERVLRGKYRI---PF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 265
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 149/300 (49%), Gaps = 42/300 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y L + +G+G+F K + L G++VA+K+I K
Sbjct: 14 IGNYRLLKTIGKGNF---AKVKLARHILTGREVAIKIIDKT------------------- 51
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+++ + REV+I++ L H N+V+ ++ E + +Y++ME GGE+
Sbjct: 52 ---------QLNPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLYLIMEYASGGEV 101
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D +++ G + E++A+ QI+S V +CH + +VHRDLK EN L + + ++K D
Sbjct: 102 FDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA---DMNIKIAD 157
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FG S+ +L+ G+ Y APE+ + Y G E D+WS+GVI Y L+ GS PF +
Sbjct: 158 FGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ VL+ P+ +S + + +KR L + KR T Q + W+ H+
Sbjct: 218 NLKELRERVLRGKYRI---PF-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 273
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 136/295 (46%), Gaps = 41/295 (13%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ HY LG+ +G G FG K + L G VAVK++ + +
Sbjct: 10 IGHYVLGDTLGVGTFG---KVKIGEHQLTGHKVAVKILNR----------------QKIR 50
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
LD + ++RE++ L+ L H ++++ Y + ++VME GGEL
Sbjct: 51 SLD-----------VVGKIKREIQNLK-LFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D I + G+ E +A+ + QILS V +CH VVHRDLKPEN L + + + K D
Sbjct: 99 FDYI-CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIAD 154
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FGLS+ + E L GS Y APEV+ R Y G E D+WS GVI Y LLCG+ PF
Sbjct: 155 FGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+F+ + E L+ + +L D KR T H W
Sbjct: 215 HVPTLFKKIRGGVFYIPE----YLNRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 48/298 (16%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y++ + +G G FG K + GQ VA+K+I K +
Sbjct: 3 IGNYQIVKTLGEGSFG---KVKLAYHTTTGQKVALKIINKKV------------------ 41
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ + + RE+ LR L H ++++ YD + D I +V+E G EL
Sbjct: 42 ---------LAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYA-GNEL 90
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D I+ R K SE++A+ QI+S V +CH +VHRDLKPEN L +E+ ++K D
Sbjct: 91 FDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIAD 146
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLHRSY--GTEADMWSIGVIAYILLCGSRPFWAR 357
FGLS+ + L GS Y APEV+ G E D+WS GVI Y++LC PF
Sbjct: 147 FGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 206
Query: 358 TESGIFRAV---LKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ +F+ + + P F LSP A +KR+L + R++ + + W
Sbjct: 207 SIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 257
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 48/298 (16%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y++ + +G G FG K + GQ VA+K+I K +
Sbjct: 12 IGNYQIVKTLGEGSFG---KVKLAYHTTTGQKVALKIINKKV------------------ 50
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ + + RE+ LR L H ++++ YD + D I +V+E G EL
Sbjct: 51 ---------LAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYA-GNEL 99
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D I+ R K SE++A+ QI+S V +CH +VHRDLKPEN L +E+ ++K D
Sbjct: 100 FDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIAD 155
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLHRSY--GTEADMWSIGVIAYILLCGSRPFWAR 357
FGLS+ + L GS Y APEV+ G E D+WS GVI Y++LC PF
Sbjct: 156 FGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215
Query: 358 TESGIFRAV---LKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ +F+ + + P F LSP A +KR+L + R++ + + W
Sbjct: 216 SIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 48/298 (16%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y++ + +G G FG K + GQ VA+K+I K +
Sbjct: 13 IGNYQIVKTLGEGSFG---KVKLAYHTTTGQKVALKIINKKV------------------ 51
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ + + RE+ LR L H ++++ YD + D I +V+E G EL
Sbjct: 52 ---------LAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYA-GNEL 100
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D I+ R K SE++A+ QI+S V +CH +VHRDLKPEN L +E+ ++K D
Sbjct: 101 FDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIAD 156
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLHRSY--GTEADMWSIGVIAYILLCGSRPFWAR 357
FGLS+ + L GS Y APEV+ G E D+WS GVI Y++LC PF
Sbjct: 157 FGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 216
Query: 358 TESGIFRAV---LKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ +F+ + + P F LSP A +KR+L + R++ + + W
Sbjct: 217 SIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 48/298 (16%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y++ + +G G FG K + GQ VA+K+I K +
Sbjct: 7 IGNYQIVKTLGEGSFG---KVKLAYHTTTGQKVALKIINKKV------------------ 45
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ + + RE+ LR L H ++++ YD + D I +V+E G EL
Sbjct: 46 ---------LAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYA-GNEL 94
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D I+ R K SE++A+ QI+S V +CH +VHRDLKPEN L +E+ ++K D
Sbjct: 95 FDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIAD 150
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLHRSY--GTEADMWSIGVIAYILLCGSRPFWAR 357
FGLS+ + L GS Y APEV+ G E D+WS GVI Y++LC PF
Sbjct: 151 FGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 210
Query: 358 TESGIFRAV---LKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ +F+ + + P F LSP A +KR+L + R++ + + W
Sbjct: 211 SIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 121/221 (54%), Gaps = 14/221 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+RREV+I L H N+++ Y + D +Y+++E G + R L + ++ E+
Sbjct: 59 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-RELQKLSRFDEQRTAT 116
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
+ ++ + +++CH + V+HRD+KPEN L S N LK DFG S + P R + + G
Sbjct: 117 YITELANALSYCHSKRVIHRDIKPENLLLGS---NGELKIADFGWSVHA-PSSRRDTLCG 172
Query: 318 SAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEA 376
+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T +R + + + +F
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF--- 229
Query: 377 PWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
P E A D + RLL + +RLT A+ L HPW+ ANS
Sbjct: 230 --PDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANS 268
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 120/221 (54%), Gaps = 14/221 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+RREV+I L H N+++ Y + D +Y+++E G + R L + ++ E+
Sbjct: 59 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-RELQKLSRFDEQRTAT 116
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
+ ++ + +++CH + V+HRD+KPEN L S N LK DFG S + P R + G
Sbjct: 117 YITELANALSYCHSKRVIHRDIKPENLLLGS---NGELKIADFGWSVHA-PSSRRTTLCG 172
Query: 318 SAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEA 376
+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T +R + + + +F
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF--- 229
Query: 377 PWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
P E A D + RLL + +RLT A+ L HPW+ ANS
Sbjct: 230 --PDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANS 268
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 38/252 (15%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y L + +G+G+F K + L G++VAVK+I K
Sbjct: 14 IGNYRLQKTIGKGNF---AKVKLARHVLTGREVAVKIIDKT------------------- 51
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+++ + REV+I++ L H N+V+ ++ E + +Y+VME GGE+
Sbjct: 52 ---------QLNPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 101
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D +++ G + E++A+ QI+S V +CH + +VHRDLK EN L + ++K D
Sbjct: 102 FDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDG---DMNIKIAD 157
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FG S+ +L+ GS Y APE+ + Y G E D+WS+GVI Y L+ GS PF +
Sbjct: 158 FGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
Query: 358 TESGIFRAVLKA 369
+ VL+
Sbjct: 218 NLKELRERVLRG 229
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 108/229 (47%), Gaps = 29/229 (12%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGK-YSEE 253
RREV++ + ++V+ D YE+ + IVME GGEL RI RG + ++E
Sbjct: 58 RREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER 117
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+A +M I + + H + HRD+KPEN L+TSK N+ LK DFG
Sbjct: 118 EASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF----------- 166
Query: 314 DIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWAR----TESGIFRAVLKA 369
A E Y DMWS+GVI YILLCG PF++ G+ +
Sbjct: 167 ---------AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 217
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
F W +S E ++ LL + +R+T + ++HPW+ S V
Sbjct: 218 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 266
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFI---LALKVLFKAQ--------------------- 71
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 72 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 123
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 124 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 180
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R +D+ G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 181 SVHA-PSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 240 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 290
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 145/300 (48%), Gaps = 42/300 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +Y L + +G+G+F K + L G++VAVK+I K
Sbjct: 13 IGNYRLLKTIGKGNF---AKVKLARHILTGKEVAVKIIDKT------------------- 50
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ +++ + REV+I + L H N+V+ ++ E + +Y+V E GGE+
Sbjct: 51 ---------QLNSSSLQKLFREVRIXKVLN-HPNIVKLFEVIETEKTLYLVXEYASGGEV 100
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
D +++ G + E++A+ QI+S V +CH + +VHRDLK EN L + + ++K D
Sbjct: 101 FDYLVAHG-RXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DXNIKIAD 156
Query: 300 FGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSY-GTEADMWSIGVIAYILLCGSRPFWAR 357
FG S+ +L+ G+ Y APE+ + Y G E D+WS+GVI Y L+ GS PF +
Sbjct: 157 FGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ VL+ P+ S + + +K+ L + KR T Q W H+
Sbjct: 217 NLKELRERVLRGKYRI---PF-YXSTDCENLLKKFLILNPSKRGTLEQIXKDRWXNVGHE 272
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 122/234 (52%), Gaps = 11/234 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E+V+RE+ R+L H N+V+F + ++ IVME GGEL +RI + G++SE++A
Sbjct: 59 ENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICN-AGRFSEDEA 116
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+ Q++S V++CH V HRDLK EN L LK DFG S +
Sbjct: 117 RFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKST 175
Query: 316 VGSAYYVAPEVLHRSY--GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK--ADP 371
VG+ Y+APEVL + G AD+WS GV Y++L G+ PF E FR + +
Sbjct: 176 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 235
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDMI 425
+ + +SPE + R+ D KR++ + +H W + +P+D++
Sbjct: 236 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKN----LPADLM 285
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 148/304 (48%), Gaps = 42/304 (13%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ KK VA+KV+ K Q+ E HQ
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFI---VALKVLFKS------QIEKEGVE-HQ----- 69
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+RRE++I +A H N+++ Y+ + D IY+++E GEL
Sbjct: 70 ---------------LRREIEI-QAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKE 113
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + + E+ +M ++ + +CH + V+HRD+KPEN LK DFG
Sbjct: 114 -LQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN---LLLGLKGELKIADFGW 169
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+W IGV+ Y LL G+ PF + + +
Sbjct: 170 SVHA-PSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
Query: 362 IFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL-ANSHDVKI 420
+R ++K D F S+ A D + +LL + +RL AQ +HPW+ ANS V
Sbjct: 229 TYRRIVKVDLKFPA----SVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSRRVLP 284
Query: 421 PSDM 424
PS +
Sbjct: 285 PSAL 288
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 80 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 137
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANS 194
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 195 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 254
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 255 PE----KFFPKARDLVEKLLVLDATKRL 278
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 122/234 (52%), Gaps = 11/234 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E+V+RE+ R+L H N+V+F + ++ IVME GGEL +RI + G++SE++A
Sbjct: 60 ENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICN-AGRFSEDEA 117
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+ Q++S V++CH V HRDLK EN L LK FG S + D
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKDT 176
Query: 316 VGSAYYVAPEVLHRSY--GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK--ADP 371
VG+ Y+APEVL + G AD+WS GV Y++L G+ PF E FR + +
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDMI 425
+ + +SPE + R+ D KR++ + +H W + +P+D++
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKN----LPADLM 286
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 140/305 (45%), Gaps = 48/305 (15%)
Query: 113 FGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPK 172
SK+ + Y + E +G G FG A K Q VA+K I + + K
Sbjct: 1 MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQ---QKVALKFISRQL--------LKK 49
Query: 173 HENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVME 232
+ H V RE+ L+ L H ++++ YD +I +V+E
Sbjct: 50 SDMHM-------------------RVEREISYLKLLR-HPHIIKLYDVITTPTDIVMVIE 89
Query: 233 LCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEEN 292
GGEL D I+ + + +E++ + QI+ + +CH +VHRDLKPEN L ++N
Sbjct: 90 YA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDN 144
Query: 293 SSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSY--GTEADMWSIGVIAYILLCG 350
++K DFGLS+ + L GS Y APEV++ G E D+WS G++ Y++L G
Sbjct: 145 LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG 204
Query: 351 SRPFWARTESGIFRAV---LKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQAL 407
PF +F+ V + P F LSP A ++R++ D +R+T +
Sbjct: 205 RLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSLIRRMIVADPMQRITIQEIR 257
Query: 408 SHPWL 412
PW
Sbjct: 258 RDPWF 262
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 79 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 136
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF ++K + F
Sbjct: 194 FVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 254 PE----KFFPKARDLVEKLLVLDATKRL 277
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 77 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 134
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 252 PE----KFFPKARDLVEKLLVLDATKRL 275
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 80 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 137
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 194
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 195 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 254
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 255 PE----KFFPKARDLVEKLLVLDATKRL 278
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 77 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 134
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 252 PE----KFFPKARDLVEKLLVLDATKRL 275
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 79 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 136
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 254 PE----KFFPKARDLVEKLLVLDATKRL 277
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 56 VTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 113
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 114 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 170
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 230
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 231 PE----KFFPKARDLVEKLLVLDATKRL 254
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 57 VTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 114
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 115 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 171
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 231
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 232 PE----KFFPKARDLVEKLLVLDATKRL 255
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 76 VTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 133
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANS 190
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 191 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 251 PE----KFFPKARDLVEKLLVLDATKRL 274
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 79 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 136
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 254 PE----KFFPKARDLVEKLLVLDATKRL 277
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 79 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 136
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 254 PE----KFFPKARDLVEKLLVLDATKRL 277
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 77 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 134
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 252 PE----KFFPKARDLVEKLLVLDATKRL 275
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 77 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 134
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANA 191
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 252 PE----KFFPKARDLVEKLLVLDATKRL 275
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 79 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 136
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF ++K + F
Sbjct: 194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 254 PE----KFFPKARDLVEKLLVLDATKRL 277
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 54 VTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 111
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 168
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 228
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 229 PE----KFFPKARDLVEKLLVLDATKRL 252
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 55 VTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 112
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 169
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 229
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 230 PE----KFFPKARDLVEKLLVLDATKRL 253
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 141/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 45
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 46 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 97
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 98 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 154
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R D+ G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 155 SVHA-PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 214 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 84 VTRERDVMSRLD-HPFFVKLYFCFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 141
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 142 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 198
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 199 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 258
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 259 PE----KFFPKARDLVEKLLVLDATKRL 282
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 76 VTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 133
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 190
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 191 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 251 PE----KFFPKARDLVEKLLVLDATKRL 274
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 141/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 50
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 51 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 102
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 103 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 159
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R D+ G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 160 SVHA-PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 219 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 269
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 141/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 46
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 47 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 98
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 99 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 155
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R D+ G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 156 SVHA-PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 215 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 265
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 61 VTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 118
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 119 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 175
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 176 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 235
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 236 PE----KFFPKARDLVEKLLVLDATKRL 259
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K GELL + + + G + E +
Sbjct: 82 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRF 139
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 140 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANX 196
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 197 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 256
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
A P+A D V++LL D KRL
Sbjct: 257 PAA----FFPKARDLVEKLLVLDATKRL 280
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 144/307 (46%), Gaps = 45/307 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
YEL +++G G+FG A+ + + VAVK I +
Sbjct: 21 YELVKDIGSGNFGV---ARLMRDKQSNELVAVKYIER----------------------- 54
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
IA +V+RE+ R+L H N+V+F + ++ IVME GGEL +R
Sbjct: 55 -------GEKIA-ANVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I + G++SE++A+ Q++S V++CH V HRDLK EN L LK DFG
Sbjct: 106 ICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICDFGY 163
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLHRSY--GTEADMWSIGVIAYILLCGSRPFWARTES 360
S + VG+ Y+APEVL + G AD+WS GV Y++L G+ PF E
Sbjct: 164 SKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEP 223
Query: 361 GIFRAVLK--ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDV 418
FR + + + + +SPE + R+ D KR++ + +H W +
Sbjct: 224 KNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKN--- 280
Query: 419 KIPSDMI 425
+P+D++
Sbjct: 281 -LPADLM 286
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 141/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFI---LALKVLFKAQ--------------------- 45
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 46 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 97
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 98 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 154
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R D+ G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 155 SVHA-PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 214 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 147/304 (48%), Gaps = 45/304 (14%)
Query: 116 SKQF-VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHE 174
S+Q+ + +E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 5 SRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFI---LALKVLFKAQ------------- 48
Query: 175 NHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELC 234
+ A +RREV+I L H N+++ Y + D +Y+++E
Sbjct: 49 --------------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYA 93
Query: 235 KGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSS 294
G + R L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E
Sbjct: 94 PLGTVY-RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE--- 149
Query: 295 LKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRP 353
LK DFG S + P R +D+ G+ Y+ PE++ R + + D+WS+GV+ Y L G P
Sbjct: 150 LKIADFGWSVHA-PSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL 412
F A T ++ + + + +F P E A D + RLL + +R + L HPW+
Sbjct: 209 FEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
Query: 413 -ANS 415
ANS
Sbjct: 264 TANS 267
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 50
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E GE+
Sbjct: 51 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPRGEVYKE 103
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 104 -LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 159
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 160 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 219 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 269
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 141/295 (47%), Gaps = 42/295 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 71
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 72 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 123
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 124 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 180
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 181 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
Query: 362 IFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F + ++ A D + RLL + +R + L HPW+ ANS
Sbjct: 240 TYKRISRVEFTFPDF----VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 290
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 47/308 (15%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
Y+ +++G G+FG A+ + L + VAVK I +
Sbjct: 22 YDFVKDIGSGNFGV---ARLMRDKLTKELVAVKYIER----------------------- 55
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
A E+V+RE+ R+L H N+V+F + ++ I+ME GGEL +R
Sbjct: 56 --------GAAIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGELYER 106
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I + G++SE++A+ Q+LS V++CH + HRDLK EN L LK DFG
Sbjct: 107 ICN-AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPA-PRLKICDFGY 164
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLHRSY--GTEADMWSIGVIAYILLCGSRPFWARTES 360
S + VG+ Y+APEVL R G AD+WS GV Y++L G+ PF E
Sbjct: 165 SKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP 224
Query: 361 GIFRAVLKADPSFDEAPWPS---LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+R ++ S + P +SPE + R+ D R++ + +H W +
Sbjct: 225 RDYRKTIQRILSVKYS-IPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN-- 281
Query: 418 VKIPSDMI 425
+P+D++
Sbjct: 282 --LPADLM 287
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 45
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 46 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 97
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 98 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 154
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R ++ G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 155 SVHA-PSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 214 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 121/234 (51%), Gaps = 11/234 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E+V+RE+ R+L H N+V+F + ++ IVME GGEL +RI + G++SE++A
Sbjct: 60 ENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICN-AGRFSEDEA 117
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+ Q++S V++CH V HRDLK EN L LK FG S +
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKST 176
Query: 316 VGSAYYVAPEVLHRSY--GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK--ADP 371
VG+ Y+APEVL + G AD+WS GV Y++L G+ PF E FR + +
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDMI 425
+ + +SPE + R+ D KR++ + +H W + +P+D++
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKN----LPADLM 286
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 13/208 (6%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
V RE ++ L H V+ Y ++DD+ +Y + K G LL + + + G + E +
Sbjct: 79 VTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGCLL-KYIRKIGSFDETCTRF 136
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE---RLND 314
+I+S + + H +G++HRDLKPEN L E+ ++ DFG + + P+ R N
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANS 193
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
VG+A YV+PE+L +S +D+W++G I Y L+ G PF A E IF+ ++K + F
Sbjct: 194 FVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E P+A D V++LL D KRL
Sbjct: 254 PE----KFFPKARDLVEKLLVLDATKRL 277
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 50
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E GE+
Sbjct: 51 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPRGEVYKE 103
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 104 -LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 159
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 160 SVHA-PSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 219 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 269
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 62
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 63 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 114
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 115 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 172 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 230
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 231 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 281
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 46
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 47 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 98
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 99 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 155
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 156 SVHA-PSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 215 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 48
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 49 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 100
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 101 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 157
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 158 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 217 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 139/296 (46%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 50
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 51 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 102
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 103 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 159
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE + R + + D+WS+GV+ Y L G PF A T
Sbjct: 160 SVHA-PSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 219 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANS 269
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 50
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 51 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 102
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 103 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 159
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 160 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 219 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 269
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 12/226 (5%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+RRE++I L H N+++ Y+ + D IY+++E GEL + L + G++ E+ +
Sbjct: 62 LRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELY-KELQKHGRFDEQRSAT 119
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
M ++ + +CH + V+HRD+KPEN L K E LK DFG S + P R + G
Sbjct: 120 FMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHA-PSLRRRXMCG 175
Query: 318 SAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEA 376
+ Y+ PE++ +++ + D+W GV+ Y L G PF + + + R ++ D F
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP-- 233
Query: 377 PWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL-ANSHDVKIP 421
P LS + D + +LL +RL + HPW+ ANS V P
Sbjct: 234 --PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPP 277
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 45
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 46 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 97
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 98 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 154
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 155 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 214 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 122/234 (52%), Gaps = 11/234 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E+V+RE+ R+L H N+V+F + ++ IVME GGEL +RI + G++SE++A
Sbjct: 60 ENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICN-AGRFSEDEA 117
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+ Q++S V++ H V HRDLK EN L LK DFG S +
Sbjct: 118 RFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPA-PRLKIADFGYSKASVLHSQPKSA 176
Query: 316 VGSAYYVAPEV-LHRSY-GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK--ADP 371
VG+ Y+APEV L + Y G AD+WS GV Y++L G+ PF E FR + +
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 372 SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDMI 425
+ + +SPE + R+ D KR++ + +H W + +P+D++
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKN----LPADLM 286
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 12/226 (5%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+RRE++I L H N+++ Y+ + D IY+++E GEL L + G++ E+ +
Sbjct: 61 LRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKE-LQKHGRFDEQRSAT 118
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
M ++ + +CH + V+HRD+KPEN L K E LK DFG S + P R + G
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHA-PSLRRRXMCG 174
Query: 318 SAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEA 376
+ Y+ PE++ +++ + D+W GV+ Y L G PF + + + R ++ D F
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP-- 232
Query: 377 PWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL-ANSHDVKIP 421
P LS + D + +LL +RL + HPW+ ANS V P
Sbjct: 233 --PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPP 276
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 12/226 (5%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+RRE++I L H N+++ Y+ + D IY+++E GEL L + G++ E+ +
Sbjct: 61 LRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKE-LQKHGRFDEQRSAT 118
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
M ++ + +CH + V+HRD+KPEN L K E LK DFG S + P R + G
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHA-PSLRRRXMCG 174
Query: 318 SAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEA 376
+ Y+ PE++ +++ + D+W GV+ Y L G PF + + + R ++ D F
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP-- 232
Query: 377 PWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL-ANSHDVKIP 421
P LS + D + +LL +RL + HPW+ ANS V P
Sbjct: 233 --PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPP 276
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 46
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 47 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 98
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 99 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 155
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 156 SCHA-PSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 215 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 47
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 48 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 99
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 100 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 156
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 157 SVHA-PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 216 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 266
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 44
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 45 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 96
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 97 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 153
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 154 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 212
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 213 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 263
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 48
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 49 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 100
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 101 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 157
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 158 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 217 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 133/242 (54%), Gaps = 30/242 (12%)
Query: 191 TAIAIEDVRR---------EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
A+ + D+R+ EV I+R H N+V+ Y +Y + ++++ME +GG L D
Sbjct: 73 VAVKMMDLRKQQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVLMEFLQGGALTD 131
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
I+S+ + +EE V +L +A+ H QGV+HRD+K ++ L T + +K DFG
Sbjct: 132 -IVSQV-RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL---DGRVKLSDFG 186
Query: 302 LSDYVKPD-ERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTE 359
+ D + +VG+ Y++APEV+ RS Y TE D+WS+G++ ++ G P+++ +
Sbjct: 187 FCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP 246
Query: 360 SGIFRAVLKADPSFDEAPWPSL------SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
++A ++P P L SP DF++R+L +D ++R TA + L HP+L
Sbjct: 247 -------VQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLL 299
Query: 414 NS 415
+
Sbjct: 300 QT 301
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 49
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 50 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 101
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 102 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 158
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 159 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 217
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 218 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 268
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 45
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 46 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 97
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 98 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 154
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 155 SVHA-PSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 214 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 48
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 49 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 100
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 101 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 157
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 158 SVHA-PSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 217 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 47
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 48 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 99
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK +FG
Sbjct: 100 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGW 156
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 157 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 216 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 266
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 15/255 (5%)
Query: 165 FLQVHCPKHENHQFTILDEYCCLFMTTAIAIE-DVRREVKILRALTGHKNLVQFYDAYED 223
F V+ + +N +F + + +E +RREV+I L H N+++ Y + D
Sbjct: 21 FGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHD 79
Query: 224 DDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPEN 283
+Y+++E G + R L + K+ E+ + ++ + +++CH + V+HRD+KPEN
Sbjct: 80 STRVYLILEYAPLGTVY-RELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPEN 138
Query: 284 FLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGV 342
L S E LK DFG S + P R + G+ Y+ PE++ R + + D+WS+GV
Sbjct: 139 LLLGSAGE---LKIADFGWSVHA-PSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 343 IAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRL 401
+ Y L G PF A T ++ + + + +F P E A D + RLL + +R
Sbjct: 195 LCYEFLVGKPPFEANTYQDTYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRP 249
Query: 402 TAAQALSHPWL-ANS 415
+ L HPW+ ANS
Sbjct: 250 MLREVLEHPWITANS 264
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 48
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 49 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 100
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 101 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 157
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 158 SVHA-PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 217 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 9/217 (4%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
EV I+R H+N+V+ Y++Y D +++VME +GG L D + + +EE V +
Sbjct: 198 EVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCL 254
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYV-KPDERLNDIVGSA 319
+L ++ H QGV+HRD+K ++ L T + +K DFG V K R +VG+
Sbjct: 255 AVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 311
Query: 320 YYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPW 378
Y++APE++ R YG E D+WS+G++ ++ G P++ + + P +
Sbjct: 312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKN-L 370
Query: 379 PSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
+SP F+ RLL +D +R TAA+ L HP+LA +
Sbjct: 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 45
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 46 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 97
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 98 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 154
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 155 SVHA-PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 214 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 9/217 (4%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
EV I+R H+N+V+ Y++Y D +++VME +GG L D + + +EE V +
Sbjct: 121 EVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCL 177
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYV-KPDERLNDIVGSA 319
+L ++ H QGV+HRD+K ++ L T + +K DFG V K R +VG+
Sbjct: 178 AVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 234
Query: 320 YYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPW 378
Y++APE++ R YG E D+WS+G++ ++ G P++ + + P +
Sbjct: 235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKN-L 293
Query: 379 PSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
+SP F+ RLL +D +R TAA+ L HP+LA +
Sbjct: 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFI---LALKVLFKAQ--------------------- 42
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 43 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 94
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 95 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 151
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 152 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 210
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 211 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 45
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 46 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 97
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK DFG
Sbjct: 98 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGW 154
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 155 SVHA-PSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 214 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+G +G+G FG A+ K+ +A+KV+ K
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQ--------------------- 48
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ A +RREV+I L H N+++ Y + D +Y+++E G + R
Sbjct: 49 ------LEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVY-R 100
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L + K+ E+ + ++ + +++CH + V+HRD+KPEN L S E LK +FG
Sbjct: 101 ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGW 157
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
S + P R + G+ Y+ PE++ R + + D+WS+GV+ Y L G PF A T
Sbjct: 158 SVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 362 IFRAVLKADPSFDEAPWPSLSPE-AIDFVKRLLNKDYRKRLTAAQALSHPWL-ANS 415
++ + + + +F P E A D + RLL + +R + L HPW+ ANS
Sbjct: 217 TYKRISRVEFTF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 119/223 (53%), Gaps = 21/223 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
EV I+R H+N+V+ Y++Y D +++VME +GG L D + + +EE V +
Sbjct: 78 EVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCL 134
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYV-KPDERLNDIVGSA 319
+L ++ H QGV+HRD+K ++ L T + +K DFG V K R +VG+
Sbjct: 135 AVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 191
Query: 320 YYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPW 378
Y++APE++ R YG E D+WS+G++ ++ G P++ LKA +
Sbjct: 192 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNLP 244
Query: 379 PSL------SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
P L SP F+ RLL +D +R TAA+ L HP+LA +
Sbjct: 245 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 287
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 9/217 (4%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
EV I+R H+N+V+ Y++Y D +++VME +GG L D + + +EE V +
Sbjct: 76 EVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCL 132
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYV-KPDERLNDIVGSA 319
+L ++ H QGV+HRD+K ++ L T + +K DFG V K R +VG+
Sbjct: 133 AVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 189
Query: 320 YYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPW 378
Y++APE++ R YG E D+WS+G++ ++ G P++ + + P +
Sbjct: 190 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKN-L 248
Query: 379 PSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
+SP F+ RLL +D +R TAA+ L HP+LA +
Sbjct: 249 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 285
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 119/223 (53%), Gaps = 21/223 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
EV I+R H+N+V+ Y++Y D +++VME +GG L D + + +EE V +
Sbjct: 71 EVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCL 127
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYV-KPDERLNDIVGSA 319
+L ++ H QGV+HRD+K ++ L T + +K DFG V K R +VG+
Sbjct: 128 AVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 184
Query: 320 YYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPW 378
Y++APE++ R YG E D+WS+G++ ++ G P++ LKA +
Sbjct: 185 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNLP 237
Query: 379 PSL------SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
P L SP F+ RLL +D +R TAA+ L HP+LA +
Sbjct: 238 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 280
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 119/223 (53%), Gaps = 21/223 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
EV I+R H+N+V+ Y++Y D +++VME +GG L D + + +EE V +
Sbjct: 67 EVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCL 123
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYV-KPDERLNDIVGSA 319
+L ++ H QGV+HRD+K ++ L T + +K DFG V K R +VG+
Sbjct: 124 AVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 180
Query: 320 YYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPW 378
Y++APE++ R YG E D+WS+G++ ++ G P++ LKA +
Sbjct: 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNLP 233
Query: 379 PSL------SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
P L SP F+ RLL +D +R TAA+ L HP+LA +
Sbjct: 234 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 276
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 47/311 (15%)
Query: 101 EGNESDIGLDKNF--GFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIP 158
EG+ +I + + G K + +EL + +G+G FG K GS Q A+KV+
Sbjct: 2 EGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK 61
Query: 159 KMIGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFY 218
K + +V M I +E H +V+ +
Sbjct: 62 KATLKVRDRVRTK-----------------MERDILVE------------VNHPFIVKLH 92
Query: 219 DAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRD 278
A++ + +Y++++ +GG+L R LS+ ++EED K + ++ + H G+++RD
Sbjct: 93 YAFQTEGKLYLILDFLRGGDLFTR-LSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRD 151
Query: 279 LKPENFLFTSKEENSSLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVLHRSYGTE-AD 336
LKPEN L +E +K DFGLS + + +++ G+ Y+APEV++R T+ AD
Sbjct: 152 LKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSAD 208
Query: 337 MWSIGVIAYILLCGSRPFWARTESGIFRAVLKAD---PSFDEAPWPSLSPEAIDFVKRLL 393
WS GV+ + +L G+ PF + +LKA P F LSPEA ++ L
Sbjct: 209 WWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF-------LSPEAQSLLRMLF 261
Query: 394 NKDYRKRLTAA 404
++ RL A
Sbjct: 262 KRNPANRLGAG 272
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 138/296 (46%), Gaps = 45/296 (15%)
Query: 114 GFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
G K + +EL + +G+G FG K GS Q A+KV+ K + +V
Sbjct: 18 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK-- 75
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
M I +E H +V+ + A++ + +Y++++
Sbjct: 76 ---------------MERDILVE------------VNHPFIVKLHYAFQTEGKLYLILDF 108
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENS 293
+GG+L R LS+ ++EED K + ++ + H G+++RDLKPEN L +E
Sbjct: 109 LRGGDLFTR-LSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEG 164
Query: 294 SLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVLHRSYGTE-ADMWSIGVIAYILLCGS 351
+K DFGLS + + +++ G+ Y+APEV++R T+ AD WS GV+ + +L G+
Sbjct: 165 HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 224
Query: 352 RPFWARTESGIFRAVLKAD---PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAA 404
PF + +LKA P F LSPEA ++ L ++ RL A
Sbjct: 225 LPFQGKDRKETMTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 273
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 138/296 (46%), Gaps = 45/296 (15%)
Query: 114 GFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
G K + +EL + +G+G FG K GS Q A+KV+ K + +V
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK-- 74
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
M I +E H +V+ + A++ + +Y++++
Sbjct: 75 ---------------MERDILVE------------VNHPFIVKLHYAFQTEGKLYLILDF 107
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENS 293
+GG+L R LS+ ++EED K + ++ + H G+++RDLKPEN L +E
Sbjct: 108 LRGGDLFTR-LSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEG 163
Query: 294 SLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVLHRSYGTE-ADMWSIGVIAYILLCGS 351
+K DFGLS + + +++ G+ Y+APEV++R T+ AD WS GV+ + +L G+
Sbjct: 164 HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223
Query: 352 RPFWARTESGIFRAVLKAD---PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAA 404
PF + +LKA P F LSPEA ++ L ++ RL A
Sbjct: 224 LPFQGKDRKETMTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 47/296 (15%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+++ +G G FG +++ G+ A+KV+ K I V QV +H N +
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHN---GRYYAMKVLKKEIVVRLKQV---EHTNDE----- 56
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+++ ++ H +++ + ++D I+++M+ +GGEL
Sbjct: 57 --------------------RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS- 95
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
+L + ++ AK ++ + + H + +++RDLKPEN L ++N +K DFG
Sbjct: 96 LLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGF 152
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ YV PD + G+ Y+APEV+ + Y D WS G++ Y +L G PF+
Sbjct: 153 AKYV-PDVTYX-LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 210
Query: 362 IFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQ-----ALSHPWL 412
+ +L A+ F P + + D + RL+ +D +RL Q +HPW
Sbjct: 211 TYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKE---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN + ++ +K DFGL+ VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLMI---DQQGYIKVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEIXINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 5 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 49
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I A+ H+N+V+FY + + Y+ +E C GGE
Sbjct: 50 -----------------ENIKKEICI-NAMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 92 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 147
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G A + + + VAVK++ + V CP
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVD-----MKRAVDCP------- 49
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 50 -----------------ENIKKEIXINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 92 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 147
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 148 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G A + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEIXINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 143/328 (43%), Gaps = 54/328 (16%)
Query: 94 PNEASIPEGNESDIGLDKNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVA 153
P E+S EGN + G + ++E +G+G FG A+ K+ G A
Sbjct: 2 PKESS-KEGNGIGVNSSNRLG-----IDNFEFIRVLGKGSFGKVMLARVKE---TGDLYA 52
Query: 154 VKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKN 213
VKV+ K + + V C MT E +IL H
Sbjct: 53 VKVLKKDVILQDDDVECT-----------------MT----------EKRILSLARNHPF 85
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQG 273
L Q + ++ D ++ VME GG+L+ I + ++ E A+ +I+S + F H +G
Sbjct: 86 LTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARFYAAEIISALMFLHDKG 144
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLNDIVGSAYYVAPEVLHRS-Y 331
+++RDLK +N L + K DFG+ + + G+ Y+APE+L Y
Sbjct: 145 IIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY 201
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVK 390
G D W++GV+ Y +LCG PF A E +F A+L DE +P+ L +A +K
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN-----DEVVYPTWLHEDATGILK 256
Query: 391 RLLNKDYRKRLTAAQA------LSHPWL 412
+ K+ RL + L HP+
Sbjct: 257 SFMTKNPTMRLGSLTQGGEHAILRHPFF 284
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ +K DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G A + + + VAVK++ + V CP
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVD-----MKRAVDCP------- 49
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 50 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 92 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 147
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN + ++ +K DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G A + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G A + + + VAVK++ + V CP
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVD-----MKRAVDCP------- 49
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 50 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 92 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 147
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G A + + + VAVK++ + V CP
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVD-----MKRAVDCP------- 49
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 50 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 92 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 147
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G A + + + VAVK++ + V CP
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVD-----MKRAVDCP------- 49
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 50 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 92 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 147
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKE---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN + ++ ++ DFGL+ VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLMI---DQQGYIQVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 3 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 47
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 48 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 89
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 90 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 145
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 146 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 206 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 262
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G A + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSXQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 5 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 49
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 50 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 92 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 147
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 9/214 (4%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
EV I+R H N+V Y +Y D +++VME +GG L D + + +EE V +
Sbjct: 92 EVVIMRDYH-HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCL 148
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYV-KPDERLNDIVGSA 319
+L +++ H QGV+HRD+K ++ L TS + +K DFG V K + +VG+
Sbjct: 149 SVLRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVGTP 205
Query: 320 YYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPW 378
Y++APEV+ R YGTE D+WS+G++ ++ G P++ R + + P
Sbjct: 206 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPP-RVKDL 264
Query: 379 PSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+S F+ +L ++ +R TA + L HP+L
Sbjct: 265 HKVSSVLRGFLDLMLVREPSQRATAQELLGHPFL 298
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWTLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 5 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 49
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 50 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 92 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 147
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 208 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKDGVNDIKNHKWFATTDWIAI 305
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN + ++ +K DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLAGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
FV ++L + +G G +G + + + VAVK++ + V CP
Sbjct: 4 FVEDWDLVQTLGEGAYG---EVQLAVNRVTEEAVAVKIVD-----MKRAVDCP------- 48
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGE 238
E++++E+ I + L H+N+V+FY + + Y+ +E C GGE
Sbjct: 49 -----------------ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 239 LLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
L DRI G E DA+ Q+++ V + H G+ HRD+KPEN L +E +LK
Sbjct: 91 LFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKIS 146
Query: 299 DFGLSDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRP 353
DFGL+ + + R LN + G+ YVAPE+L R + D+WS G++ +L G P
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
+ ++S + K ++ PW + + + ++L ++ R+T W
Sbjct: 207 WDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 11/221 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E++++E+ I + L H+N+V+FY + + Y+ +E C GGEL DRI G E DA
Sbjct: 49 ENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDA 106
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER---L 312
+ Q+++ V + H G+ HRD+KPEN L +E +LK DFGL+ + + R L
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLL 163
Query: 313 NDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAD 370
N + G+ YVAPE+L R + D+WS G++ +L G P+ ++S + K
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 223
Query: 371 PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPW 411
++ PW + + + ++L ++ R+T W
Sbjct: 224 KTYLN-PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 193 IAIEDVRREVKILRAL--TGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY 250
IA ++V V R L T H L A++ D + VME GGEL LSR +
Sbjct: 44 IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH-LSRERVF 102
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPD 309
+EE A+ +I+S + + H + VV+RD+K EN + +++ +K DFGL + +
Sbjct: 103 TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG 159
Query: 310 ERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
+ G+ Y+APEVL YG D W +GV+ Y ++CG PF+ + +F +L
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
+ F +LSPEA + LL KD ++RL
Sbjct: 220 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 41 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 96
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 97 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 155
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L +E ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 156 PENLLI---DEQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 210
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 211 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 265
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 266 KRFGNLKNGVNDIKNHKWFATTDWIAI 292
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKDGVNDIKNHKWFATTDWIAI 305
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 193 IAIEDVRREVKILRAL--TGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY 250
IA ++V V R L T H L A++ D + VME GGEL LSR +
Sbjct: 47 IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH-LSRERVF 105
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPD 309
+EE A+ +I+S + + H + VV+RD+K EN + +++ +K DFGL + +
Sbjct: 106 TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG 162
Query: 310 ERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
+ G+ Y+APEVL YG D W +GV+ Y ++CG PF+ + +F +L
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 222
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
+ F +LSPEA + LL KD ++RL
Sbjct: 223 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 251
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 193 IAIEDVRREVKILRAL--TGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY 250
IA ++V V R L T H L A++ D + VME GGEL LSR +
Sbjct: 44 IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH-LSRERVF 102
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPD 309
+EE A+ +I+S + + H + VV+RD+K EN + +++ +K DFGL + +
Sbjct: 103 TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG 159
Query: 310 ERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
+ G+ Y+APEVL YG D W +GV+ Y ++CG PF+ + +F +L
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
+ F +LSPEA + LL KD ++RL
Sbjct: 220 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLXGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIXNHKWFATTDWIAI 306
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 11/223 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ I R+L H+++V F+ +ED+D +++V+ELC+ LL+ + R +E +A
Sbjct: 62 EKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 119
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLND 314
+ + QI+ + H V+HRDLK N E+ +K DFGL+ V+ D ER
Sbjct: 120 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKT 176
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+ G+ Y+APEVL + + E D+WSIG I Y LL G PF + + K + S
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 236
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH 416
+ ++P A ++++L D R T + L+ + + +
Sbjct: 237 PK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY 275
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 11/223 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ I R+L H+++V F+ +ED+D +++V+ELC+ LL+ + R +E +A
Sbjct: 66 EKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 123
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLND 314
+ + QI+ + H V+HRDLK N E+ +K DFGL+ V+ D ER
Sbjct: 124 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKT 180
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+ G+ Y+APEVL + + E D+WSIG I Y LL G PF + + K + S
Sbjct: 181 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 240
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH 416
+ ++P A ++++L D R T + L+ + + +
Sbjct: 241 PK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY 279
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 139/292 (47%), Gaps = 45/292 (15%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ ++EL + +G G +G + G G+ A+KV+ K
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKK-------------------- 92
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
+ A E R E ++L + LV + A++ + ++++++ GGEL
Sbjct: 93 ------ATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL 146
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
LS+ +++E + +I + +I+ + H G+++RD+K EN L S N + D
Sbjct: 147 FTH-LSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS---NGHVVLTD 202
Query: 300 FGLSDYVKPD--ERLNDIVGSAYYVAPEVLH---RSYGTEADMWSIGVIAYILLCGSRPF 354
FGLS D ER D G+ Y+AP+++ + D WS+GV+ Y LL G+ PF
Sbjct: 203 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
Query: 355 WA----RTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYRKRL 401
+++ I R +LK++P P+P +S A D ++RLL KD +KRL
Sbjct: 263 TVDGEKNSQAEISRRILKSEP-----PYPQEMSALAKDLIQRLLMKDPKKRL 309
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 11/223 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ I R+L H+++V F+ +ED+D +++V+ELC+ LL+ + R +E +A
Sbjct: 62 EKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 119
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLND 314
+ + QI+ + H V+HRDLK N E+ +K DFGL+ V+ D ER
Sbjct: 120 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKT 176
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+ G+ Y+APEVL + + E D+WSIG I Y LL G PF + + K + S
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 236
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH 416
+ ++P A ++++L D R T + L+ + + +
Sbjct: 237 PK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY 275
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 193 IAIEDVRREVKILRAL--TGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY 250
IA ++V V R L T H L A++ D + VME GGEL LSR +
Sbjct: 44 IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH-LSRERVF 102
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPD 309
+EE A+ +I+S + + H + VV+RD+K EN + +++ +K DFGL + +
Sbjct: 103 TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG 159
Query: 310 ERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
+ G+ Y+APEVL YG D W +GV+ Y ++CG PF+ + +F +L
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
+ F +LSPEA + LL KD ++RL
Sbjct: 220 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 193 IAIEDVRREVKILRAL--TGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY 250
IA ++V V R L T H L A++ D + VME GGEL LSR +
Sbjct: 44 IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH-LSRERVF 102
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPD 309
+EE A+ +I+S + + H + VV+RD+K EN + +++ +K DFGL + +
Sbjct: 103 TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG 159
Query: 310 ERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
+ G+ Y+APEVL YG D W +GV+ Y ++CG PF+ + +F +L
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
+ F +LSPEA + LL KD ++RL
Sbjct: 220 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN + ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLMI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 55 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRL-----TAAQALSHPWLANSHDVKI 420
KR +H W A + + I
Sbjct: 279 KRFGNLPNGVNDIKNHKWFATTDWIAI 305
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 47/321 (14%)
Query: 109 LDKNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQV 168
LD++ +KQ +++ E++G G +G A K+ GQ VA+K +P
Sbjct: 18 LDED-SLTKQPEEVFDVLEKLGEGSYGSVYKAIHKE---TGQIVAIKQVP---------- 63
Query: 169 HCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIY 228
++++ +E+ I++ ++V++Y +Y + +++
Sbjct: 64 ----------------------VESDLQEIIKEISIMQQCDS-PHVVKYYGSYFKNTDLW 100
Query: 229 IVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
IVME C G + D I R +E++ ++ L + + HF +HRD+K N L +
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT 160
Query: 289 KEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYI 346
+ K DFG++ + + N ++G+ +++APEV+ Y AD+WS+G+ A
Sbjct: 161 E---GHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIE 217
Query: 347 LLCGSRPFW-ARTESGIFRAVLKADPSFDEAPWPSL-SPEAIDFVKRLLNKDYRKRLTAA 404
+ G P+ IF P+F + P L S DFVK+ L K +R TA
Sbjct: 218 MAEGKPPYADIHPMRAIFMIPTNPPPTFRK---PELWSDNFTDFVKQCLVKSPEQRATAT 274
Query: 405 QALSHPWLANSHDVKIPSDMI 425
Q L HP++ ++ V I D+I
Sbjct: 275 QLLQHPFVRSAKGVSILRDLI 295
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 75 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 130
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 131 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 190 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 245 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 299
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 300 KRFGNLKNGVNDIKNHKWFATTDWIAI 326
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GG++ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ +K DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 40 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 95
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 96 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 154
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 155 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWTLCGTPEYLAPEIILSKGYNKAVDWWA 209
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 210 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 264
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 265 KRFGNLKDGVNDIKNHKWFATTDWIAI 291
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 124/234 (52%), Gaps = 12/234 (5%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ I ++L + ++V F+ +EDDD +Y+V+E+C+ LL+ + R +E +A
Sbjct: 87 EKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA 144
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLND 314
+ M Q + V + H V+HRDLK N ++ +K DFGL+ ++ D ER D
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKD 201
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+ G+ Y+APEVL + + E D+WS+G I Y LL G PF + + K + S
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH-DVKIPSDMIV 426
++P A ++R+L+ D R + A+ L+ + + + +++P+ +
Sbjct: 262 PR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLT 311
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ L + +
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLTKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN + ++ +K DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ L + +
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLTKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN + ++ +K DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GG++ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ +K DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 193 IAIEDVRREVKILRAL--TGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY 250
IA ++V V R L T H L A++ D + VME GGEL LSR +
Sbjct: 49 IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH-LSRERVF 107
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPD 309
+EE A+ +I+S + + H + VV+RD+K EN + +++ +K DFGL + +
Sbjct: 108 TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG 164
Query: 310 ERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
+ G+ Y+APEVL YG D W +GV+ Y ++CG PF+ + +F +L
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 224
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
+ F +LSPEA + LL KD ++RL
Sbjct: 225 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 253
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 124/234 (52%), Gaps = 12/234 (5%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ I ++L + ++V F+ +EDDD +Y+V+E+C+ LL+ + R +E +A
Sbjct: 71 EKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA 128
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLND 314
+ M Q + V + H V+HRDLK N ++ +K DFGL+ ++ D ER D
Sbjct: 129 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKD 185
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+ G+ Y+APEVL + + E D+WS+G I Y LL G PF + + K + S
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 245
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH-DVKIPSDMIV 426
++P A ++R+L+ D R + A+ L+ + + + +++P+ +
Sbjct: 246 PR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLT 295
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN + ++ +K DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 47 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 102
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 161
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 162 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 217 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 271
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 272 KRFGNLKNGVNDIKNHKWFATTDWIAI 298
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 193 IAIEDVRREVKILRAL--TGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY 250
IA ++V V R L T H L A++ D + VME GGEL LSR +
Sbjct: 44 IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH-LSRERVF 102
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPD 309
+EE A+ +I+S + + H + VV+RD+K EN + +++ +K DFGL + +
Sbjct: 103 TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG 159
Query: 310 ERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK 368
+ G+ Y+APEVL YG D W +GV+ Y ++CG PF+ + +F +L
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 369 ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
+ F +LSPEA + LL KD ++RL
Sbjct: 220 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 11/223 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ I R+L H+++V F+ +ED+D +++V+ELC+ LL+ + R +E +A
Sbjct: 86 EKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 143
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLND 314
+ + QI+ + H V+HRDLK N E+ +K DFGL+ V+ D ER
Sbjct: 144 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKV 200
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+ G+ Y+APEVL + + E D+WSIG I Y LL G PF + + K + S
Sbjct: 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 260
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH 416
+ ++P A ++++L D R T + L+ + + +
Sbjct: 261 PK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY 299
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 147/341 (43%), Gaps = 85/341 (24%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
++L +G G +G CSA K G+ VA+K I +F
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKP---TGEIVAIKKIEPFDKPLF----------------- 52
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFY-----DAYEDDDNIYIVMELCKGG 237
A+ +R E+KIL+ H+N++ + D++E+ + +YI+ EL +
Sbjct: 53 -----------ALRTLR-EIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD 99
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
L R++S S++ + + Q L V H V+HRDLKP N L S N LK
Sbjct: 100 --LHRVIS-TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKV 153
Query: 298 IDFGL--------SDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIA 344
DFGL +D +P + + + V + +Y APEV+ S Y D+WS G I
Sbjct: 154 CDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
Query: 345 YILLCGSRPFWAR------------------------TESGIFRAVLKADPSFDEAP--- 377
L F R ES R +K+ P + AP
Sbjct: 214 AELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK 273
Query: 378 -WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+P ++P+ ID ++R+L D KR+TA +AL HP+L HD
Sbjct: 274 MFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 11/223 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ I R+L H+++V F+ +ED+D +++V+ELC+ LL+ + R +E +A
Sbjct: 84 EKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 141
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLND 314
+ + QI+ + H V+HRDLK N E+ +K DFGL+ V+ D ER
Sbjct: 142 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKV 198
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+ G+ Y+APEVL + + E D+WSIG I Y LL G PF + + K + S
Sbjct: 199 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 258
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH 416
+ ++P A ++++L D R T + L+ + + +
Sbjct: 259 PK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY 297
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 147/341 (43%), Gaps = 85/341 (24%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
++L +G G +G CSA K G+ VA+K I +F
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKP---TGEIVAIKKIEPFDKPLF----------------- 52
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFY-----DAYEDDDNIYIVMELCKGG 237
A+ +R E+KIL+ H+N++ + D++E+ + +YI+ EL +
Sbjct: 53 -----------ALRTLR-EIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD 99
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
L R++S S++ + + Q L V H V+HRDLKP N L S N LK
Sbjct: 100 --LHRVIS-TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKV 153
Query: 298 IDFGL--------SDYVKPDER---LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIA 344
DFGL +D +P + + + V + +Y APEV+ S Y D+WS G I
Sbjct: 154 CDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
Query: 345 YILLCGSRPFWAR------------------------TESGIFRAVLKADPSFDEAP--- 377
L F R ES R +K+ P + AP
Sbjct: 214 AELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK 273
Query: 378 -WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+P ++P+ ID ++R+L D KR+TA +AL HP+L HD
Sbjct: 274 MFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 11/223 (4%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ I R+L H+++V F+ +ED+D +++V+ELC+ LL+ + R +E +A
Sbjct: 60 EKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 117
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLND 314
+ + QI+ + H V+HRDLK N E+ +K DFGL+ V+ D ER
Sbjct: 118 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKV 174
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+ G+ Y+APEVL + + E D+WSIG I Y LL G PF + + K + S
Sbjct: 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 234
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH 416
+ ++P A ++++L D R T + L+ + + +
Sbjct: 235 PK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY 273
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G+++E A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H + ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKETGNHFAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEYS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 145/343 (42%), Gaps = 89/343 (25%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
++L +G G +G CSA K G+ VA+K I +F
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKP---TGEIVAIKKIEPFDKPLF----------------- 52
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFY-----DAYEDDDNIYIVMELCKGG 237
A+ +R E+KIL+ H+N++ + D++E+ + +YI+ EL +
Sbjct: 53 -----------ALRTLR-EIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD 99
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
L R++S S++ + + Q L V H V+HRDLKP N L S N LK
Sbjct: 100 --LHRVIS-TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKV 153
Query: 298 IDFGLSDYVKPDERLND-------------IVGSAYYVAPEVLHRS--YGTEADMWSIGV 342
DFGL+ + DE D V + +Y APEV+ S Y D+WS G
Sbjct: 154 CDFGLARII--DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 343 IAYILLCGSRPFWAR------------------------TESGIFRAVLKADPSFDEAP- 377
I L F R ES R +K+ P + AP
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 378 ---WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+P ++P+ ID ++R+L D KR+TA +AL HP+L HD
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H + ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKETGNHFAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEYS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKDGVNDIKNHKWFATTDWIAI 305
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H + ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKETGNHFAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEYS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKDGVNDIKNHKWFATTDWIAI 305
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 75 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 130
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 190 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 245 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 299
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 300 KRFGNLKNGVNDIKNHKWFATTDWIAI 326
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 156/357 (43%), Gaps = 77/357 (21%)
Query: 99 IPEGNESDIGLDKNFGFSKQFV--AHYELGE------EVGRGHFGYTCSAKAKKGSLKGQ 150
+P G+ S L + GF KQ V +EL + VG G +G CSA K+ G+
Sbjct: 15 VPRGSMS---LIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRS---GE 68
Query: 151 DVAVKVIPK-MIGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALT 209
VA+K + + IF + Y L + + E+V + +L T
Sbjct: 69 KVAIKKLSRPFQSEIFAK--------------RAYRELLLLKHMQHENV---IGLLDVFT 111
Query: 210 GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFC 269
+L FYD Y+VM + L +I+ G ++SEE + ++ Q+L + +
Sbjct: 112 PASSLRNFYD-------FYLVMPFMQTD--LQKIM--GMEFSEEKIQYLVYQMLKGLKYI 160
Query: 270 HFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-- 327
H GVVHRDLKP N + E+ LK +DFGL+ + D + V + +Y APEV+
Sbjct: 161 HSAGVVHRDLKPGNL---AVNEDCELKILDFGLARHA--DAEMTGYVVTRWYRAPEVILS 215
Query: 328 HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAD----------------- 370
Y D+WS+G I +L G F + +LK
Sbjct: 216 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275
Query: 371 ---PSFDEAP-------WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
S + P +P SP+A D ++++L D KRLTAAQAL+HP+ D
Sbjct: 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD 332
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 152/349 (43%), Gaps = 74/349 (21%)
Query: 107 IGLDKNFGFSKQFV--AHYELGE------EVGRGHFGYTCSAKAKKGSLKGQDVAVKVIP 158
+ L + GF KQ V +EL + VG G +G CSA K+ G+ VA+K +
Sbjct: 2 LSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRS---GEKVAIKKLS 58
Query: 159 K-MIGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQF 217
+ IF + Y L + + E+V + +L T +L F
Sbjct: 59 RPFQSEIFAK--------------RAYRELLLLKHMQHENV---IGLLDVFTPASSLRNF 101
Query: 218 YDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHR 277
YD Y+VM + L +I+ G K+SEE + ++ Q+L + + H GVVHR
Sbjct: 102 YD-------FYLVMPFMQTD--LQKIM--GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHR 150
Query: 278 DLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEA 335
DLKP N + E+ LK +DFGL+ + D + V + +Y APEV+ Y
Sbjct: 151 DLKPGNL---AVNEDCELKILDFGLARHA--DAEMTGYVVTRWYRAPEVILSWMHYNQTV 205
Query: 336 DMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAD--------------------PSFDE 375
D+WS+G I +L G F + +LK S +
Sbjct: 206 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQ 265
Query: 376 AP-------WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
P +P SP+A D ++++L D KRLTAAQAL+HP+ D
Sbjct: 266 TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD 314
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 12/249 (4%)
Query: 172 KHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVM 231
K +N + ++L + + +ED E+ IL A H N+V+ DA+ ++N++I++
Sbjct: 55 KAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL-ASCDHPNIVKLLDAFYYENNLWILI 113
Query: 232 ELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEE 291
E C GG + +L +E ++V Q L + + H ++HRDLK N LFT
Sbjct: 114 EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL--- 170
Query: 292 NSSLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVL------HRSYGTEADMWSIGVIA 344
+ +K DFG+S + +R + +G+ Y++APEV+ R Y +AD+WS+G+
Sbjct: 171 DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
Query: 345 YILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAA 404
+ P + + K++P P S DF+K+ L K+ R T +
Sbjct: 231 IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 405 QALSHPWLA 413
Q L HP++
Sbjct: 290 QLLQHPFVT 298
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN + ++ ++ DFG + VK R + G+ Y+APE ++ + Y D W+
Sbjct: 169 PENLII---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIIISKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 49 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 104
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 105 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 163
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 164 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 218
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 219 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 273
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 274 KRFGNLKNGVNDIKNHKWFATTDWIAI 300
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 12/249 (4%)
Query: 172 KHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVM 231
K +N + ++L + + +ED E+ IL A H N+V+ DA+ ++N++I++
Sbjct: 55 KAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL-ASCDHPNIVKLLDAFYYENNLWILI 113
Query: 232 ELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEE 291
E C GG + +L +E ++V Q L + + H ++HRDLK N LFT
Sbjct: 114 EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL--- 170
Query: 292 NSSLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVL------HRSYGTEADMWSIGVIA 344
+ +K DFG+S + +R + +G+ Y++APEV+ R Y +AD+WS+G+
Sbjct: 171 DGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
Query: 345 YILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAA 404
+ P + + K++P P S DF+K+ L K+ R T +
Sbjct: 231 IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 405 QALSHPWLA 413
Q L HP++
Sbjct: 290 QLLQHPFVT 298
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ L + +
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLTKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN + ++ +K DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 122/243 (50%), Gaps = 24/243 (9%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYED------DDNIYIVMELCKGGELLDRIL-SRGG 248
E++++E+ +L+ + H+N+ +Y A+ DD +++VME C G + D I ++G
Sbjct: 65 EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN 124
Query: 249 KYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYV-K 307
EE + +IL ++ H V+HRD+K +N L T EN+ +K +DFG+S + +
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDR 181
Query: 308 PDERLNDIVGSAYYVAPEVL------HRSYGTEADMWSIGVIAYILLCGSRPFW-ARTES 360
R N +G+ Y++APEV+ +Y ++D+WS+G+ A + G+ P
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR 241
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL---ANSHD 417
+F P W S + F++ L K++ +R Q + HP++ N
Sbjct: 242 ALFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQ 298
Query: 418 VKI 420
V+I
Sbjct: 299 VRI 301
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 12/249 (4%)
Query: 172 KHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVM 231
K +N + ++L + + +ED E+ IL A H N+V+ DA+ ++N++I++
Sbjct: 55 KAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL-ASCDHPNIVKLLDAFYYENNLWILI 113
Query: 232 ELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEE 291
E C GG + +L +E ++V Q L + + H ++HRDLK N LFT
Sbjct: 114 EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL--- 170
Query: 292 NSSLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVL------HRSYGTEADMWSIGVIA 344
+ +K DFG+S + +R + +G+ Y++APEV+ R Y +AD+WS+G+
Sbjct: 171 DGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
Query: 345 YILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAA 404
+ P + + K++P P S DF+K+ L K+ R T +
Sbjct: 231 IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 405 QALSHPWLA 413
Q L HP++
Sbjct: 290 QLLQHPFVT 298
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 75 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 130
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK + G+ Y+APE +L + Y D W+
Sbjct: 190 PENLLI---DQQGYIQVTDFGFAKRVKGATW--TLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 245 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 299
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 300 KRFGNLKNGVNDIKNHKWFATTDWIAI 326
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+AP +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPAIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 47 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 102
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++ E A+ QI+ + H +++RDLK
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 161
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 162 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 217 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 271
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 272 KRFGNLKNGVNDIKNHKWFATTDWIAI 298
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 123/234 (52%), Gaps = 12/234 (5%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ I ++L + ++V F+ +EDDD +Y+V+E+C+ LL+ + R +E +A
Sbjct: 87 EKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA 144
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLND 314
+ M Q + V + H V+HRDLK N ++ +K DFGL+ ++ D ER
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKT 201
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+ G+ Y+APEVL + + E D+WS+G I Y LL G PF + + K + S
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH-DVKIPSDMIV 426
++P A ++R+L+ D R + A+ L+ + + + +++P+ +
Sbjct: 262 PR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLT 311
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
K + +H W A + + I
Sbjct: 279 KAFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 123/234 (52%), Gaps = 12/234 (5%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ I ++L + ++V F+ +EDDD +Y+V+E+C+ LL+ + R +E +A
Sbjct: 87 EKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA 144
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLND 314
+ M Q + V + H V+HRDLK N ++ +K DFGL+ ++ D ER
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKX 201
Query: 315 IVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+ G+ Y+APEVL + + E D+WS+G I Y LL G PF + + K + S
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 374 DEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH-DVKIPSDMIV 426
++P A ++R+L+ D R + A+ L+ + + + +++P+ +
Sbjct: 262 PR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLT 311
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +I +A+ LV+ +
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQ---IEHTLNEKRIQQAVN-FPFLVKLEFS 110
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+V+E GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 111 FKDNSNLYMVLEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ +K DFG + VK R + G+ Y+APE +L + Y D W+
Sbjct: 170 PENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 279
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAI 306
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 122/250 (48%), Gaps = 13/250 (5%)
Query: 172 KHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVM 231
K +N + ++L + + +ED E+ IL A H N+V+ DA+ ++N++I++
Sbjct: 28 KAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL-ASCDHPNIVKLLDAFYYENNLWILI 86
Query: 232 ELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEE 291
E C GG + +L +E ++V Q L + + H ++HRDLK N LFT
Sbjct: 87 EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL--- 143
Query: 292 NSSLKAIDFGLS--DYVKPDERLNDIVGSAYYVAPEVL------HRSYGTEADMWSIGVI 343
+ +K DFG+S + +R + +G+ Y++APEV+ R Y +AD+WS+G+
Sbjct: 144 DGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 203
Query: 344 AYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTA 403
+ P + + K++P P S DF+K+ L K+ R T
Sbjct: 204 LIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCLEKNVDARWTT 262
Query: 404 AQALSHPWLA 413
+Q L HP++
Sbjct: 263 SQLLQHPFVT 272
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 161 IGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA 220
G + L H ++ ILD+ + + IE E +IL+A+ LV+ +
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IEHTLNEKRILQAVN-FPFLVKLEFS 109
Query: 221 YEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLK 280
++D+ N+Y+VME GGE+ L R G++SE A+ QI+ + H +++RDLK
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 281 PENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWS 339
PEN L ++ ++ DFG + VK R + G+ +APE +L + Y D W+
Sbjct: 169 PENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEALAPEIILSKGYNKAVDWWA 223
Query: 340 IGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS-LSPEAIDFVKRLLNKDYR 398
+GV+ Y + G PF+A I+ ++ F PS S + D ++ LL D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLT 278
Query: 399 KRLTAAQ-----ALSHPWLANSHDVKI 420
KR + +H W A + + I
Sbjct: 279 KRFGNLKNGVNDIKNHKWFATTDWIAI 305
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+EL +G+G +G + G+ G+ A+KV+ K +I H + IL+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKK--AMIVRNAKDTAHTKAERNILE 76
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
E H +V A++ +Y+++E GGEL +
Sbjct: 77 E-------------------------VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQ 111
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L R G + E+ A + +I + H +G+++RDLKPEN + + +K DFGL
Sbjct: 112 -LEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ---GHVKLTDFGL 167
Query: 303 -SDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + + G+ Y+APE+L RS + D WS+G + Y +L G+ PF
Sbjct: 168 CKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL-----TAAQALSHPWL 412
+LK + P L+ EA D +K+LL ++ RL A + +HP+
Sbjct: 228 KTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+EL +G+G +G + G+ G+ A+KV+ K +I H + IL+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKK--AMIVRNAKDTAHTKAERNILE 76
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
E H +V A++ +Y+++E GGEL +
Sbjct: 77 E-------------------------VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQ 111
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
L R G + E+ A + +I + H +G+++RDLKPEN + + +K DFGL
Sbjct: 112 -LEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ---GHVKLTDFGL 167
Query: 303 -SDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + + G+ Y+APE+L RS + D WS+G + Y +L G+ PF
Sbjct: 168 CKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
Query: 361 GIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL-----TAAQALSHPWL 412
+LK + P L+ EA D +K+LL ++ RL A + +HP+
Sbjct: 228 KTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 121/226 (53%), Gaps = 23/226 (10%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDN--IYIVMELCKGGELLDRILSRGGK----YSEED 254
EV +LR L H N+V++YD D N +YIVME C+GG+L ++++G K EE
Sbjct: 55 EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 255 AKIVMVQILSVVAFCHFQG-----VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD 309
VM Q+ + CH + V+HRDLKP N K+ ++K DFGL+ + D
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ---NVKLGDFGLARILNHD 169
Query: 310 ERL-NDIVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
E + VG+ YY++PE ++R SY ++D+WS+G + Y L PF A ++ + +
Sbjct: 170 EDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 368 KADPSFDEAPWPSLSPEAIDFVKRLLN-KDYRKRLTAAQALSHPWL 412
+ F P+ S E + + R+LN KDY R + + L +P +
Sbjct: 230 EG--KFRRIPY-RYSDELNEIITRMLNLKDYH-RPSVEEILENPLI 271
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 15/226 (6%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYED--DDNIYIVMELCKGGELLDRILSRGGKYSE 252
IE V +E+ IL+ L H N+V+ + +D +D++Y+V EL G +++ + SE
Sbjct: 80 IEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME--VPTLKPLSE 136
Query: 253 EDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVK-PDER 311
+ A+ ++ + + H+Q ++HRD+KP N L E+ +K DFG+S+ K D
Sbjct: 137 DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKGSDAL 193
Query: 312 LNDIVGSAYYVAPEVLHRSY----GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
L++ VG+ ++APE L + G D+W++GV Y + G PF + +
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIK 253
Query: 368 KADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
F + P ++ + D + R+L+K+ R+ + HPW+
Sbjct: 254 SQALEFPDQ--PDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H L +++ D + VME GGEL LSR +SE+ A+ +I+S + + H
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFH-LSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 271 FQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLNDIVGSAYYVAPEVLH 328
+ VV+RDLK EN + +++ +K DFGL + +K + G+ Y+APEVL
Sbjct: 266 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 329 -RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAID 387
YG D W +GV+ Y ++CG PF+ + +F +L + F +L PEA
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 378
Query: 388 FVKRLLNKDYRKRL-----TAAQALSHPWLAN 414
+ LL KD ++RL A + + H + A
Sbjct: 379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H L +++ D + VME GGEL LSR +SE+ A+ +I+S + + H
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFH-LSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 271 FQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLNDIVGSAYYVAPEVLH 328
+ VV+RDLK EN + +++ +K DFGL + +K + G+ Y+APEVL
Sbjct: 269 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 325
Query: 329 -RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAID 387
YG D W +GV+ Y ++CG PF+ + +F +L + F +L PEA
Sbjct: 326 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 381
Query: 388 FVKRLLNKDYRKRL-----TAAQALSHPWLAN 414
+ LL KD ++RL A + + H + A
Sbjct: 382 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 413
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 44/253 (17%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYED--DDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
++RE+KIL L G N++ D +D +V E + + ++ D
Sbjct: 78 IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDI 133
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
+ M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P + N
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 316 VGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES------------- 360
V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 361 -----GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLNKDYRK 399
I + ++ DP F++ W +SPEA+DF+ +LL D++
Sbjct: 252 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 400 RLTAAQALSHPWL 412
RLTA +A+ HP+
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H L +++ D + VME GGEL LSR +SE+ A+ +I+S + + H
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFH-LSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 271 FQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLNDIVGSAYYVAPEVLH 328
+ VV+RDLK EN + +++ +K DFGL + +K + G+ Y+APEVL
Sbjct: 127 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 329 -RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAID 387
YG D W +GV+ Y ++CG PF+ + +F +L + F +L PEA
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 239
Query: 388 FVKRLLNKDYRKRL-----TAAQALSHPWLAN 414
+ LL KD ++RL A + + H + A
Sbjct: 240 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 271
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 16/199 (8%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H +V+ + A++ + +Y++++ +GG+L R LS+ ++EED K + ++ + H
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTR-LSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVLHR 329
G+++RDLKPEN L +E +K DFGLS + + +++ G+ Y+APEV++R
Sbjct: 148 SLGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 330 -SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAD---PSFDEAPWPSLSPEA 385
+ AD WS GV+ + +L GS PF + +LKA P F LS EA
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF-------LSTEA 257
Query: 386 IDFVKRLLNKDYRKRLTAA 404
++ L ++ RL +
Sbjct: 258 QSLLRALFKRNPANRLGSG 276
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H L +++ D + VME GGEL LSR +SE+ A+ +I+S + + H
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFH-LSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 271 FQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLNDIVGSAYYVAPEVLH 328
+ VV+RDLK EN + +++ +K DFGL + +K + G+ Y+APEVL
Sbjct: 128 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 329 -RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAID 387
YG D W +GV+ Y ++CG PF+ + +F +L + F +L PEA
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 240
Query: 388 FVKRLLNKDYRKRL-----TAAQALSHPWLAN 414
+ LL KD ++RL A + + H + A
Sbjct: 241 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 272
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H L +++ D + VME GGEL LSR +SE+ A+ +I+S + + H
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFH-LSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 271 FQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLNDIVGSAYYVAPEVLH 328
+ VV+RDLK EN + +++ +K DFGL + +K + G+ Y+APEVL
Sbjct: 126 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 329 -RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAID 387
YG D W +GV+ Y ++CG PF+ + +F +L + F +L PEA
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 238
Query: 388 FVKRLLNKDYRKRL-----TAAQALSHPWLAN 414
+ LL KD ++RL A + + H + A
Sbjct: 239 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 270
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ ++R + N+V + D+Y D +++VME GG L D + E
Sbjct: 62 ELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQI 118
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLND 314
V + L + F H V+HRD+K +N L + S+K DFG + P++ + ++
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSE 175
Query: 315 IVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+VG+ Y++APEV+ R +YG + D+WS+G++A ++ G P+ E+ + L A
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGT 233
Query: 374 DEAPWPS-LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
E P LS DF+ R L+ D KR +A + L H +L
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 133/284 (46%), Gaps = 40/284 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ +EL + +G+G FG A+ KK + Q A+K + K + ++ V C
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTN---QFFAIKALKKDVVLMDDDVEC--------- 64
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
T + E ++L H L + ++ +N++ VME GG+L
Sbjct: 65 -----------TMV-------EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL 106
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
+ I S K+ A +I+ + F H +G+V+RDLK +N L +++ +K D
Sbjct: 107 MYHIQS-CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIAD 162
Query: 300 FGL-SDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWAR 357
FG+ + + D + N+ G+ Y+APE+L + Y D WS GV+ Y +L G PF +
Sbjct: 163 FGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 222
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E +F ++ +P + W L EA D + +L ++ KRL
Sbjct: 223 DEEELFHSIRMDNPFYPR--W--LEKEAKDLLVKLFVREPEKRL 262
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 11/220 (5%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ ++R + N+V + D+Y D +++VME GG L D + E
Sbjct: 62 ELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQI 118
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLND 314
V + L + F H V+HRD+K +N L + S+K DFG + P++ + +
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRST 175
Query: 315 IVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+VG+ Y++APEV+ R +YG + D+WS+G++A ++ G P+ E+ + L A
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGT 233
Query: 374 DEAPWPS-LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
E P LS DF+ R L+ D KR +A + L H +L
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 10/209 (4%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEED 254
+E E ++L L L Q + ++ D +Y VME GG+L+ I + GK+ E
Sbjct: 63 VECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI-QQVGKFKEPQ 121
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLN 313
A +I + F H +G+++RDLK +N + S+ +K DFG+ +++
Sbjct: 122 AVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE---GHIKIADFGMCKEHMMDGVTTR 178
Query: 314 DIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPS 372
+ G+ Y+APE++ ++ YG D W+ GV+ Y +L G PF E +F+++++ + S
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS 238
Query: 373 FDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
+ + SLS EA+ K L+ K KRL
Sbjct: 239 YPK----SLSKEAVSICKGLMTKHPAKRL 263
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ ++R + N+V + D+Y D +++VME GG L D + E
Sbjct: 62 ELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQI 118
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLND 314
V + L + F H V+HRD+K +N L + S+K DFG + P++ + +
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSX 175
Query: 315 IVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+VG+ Y++APEV+ R +YG + D+WS+G++A ++ G P+ E+ + L A
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGT 233
Query: 374 DEAPWPS-LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
E P LS DF+ R L D KR +A + L H +L
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 150/348 (43%), Gaps = 79/348 (22%)
Query: 111 KNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHC 170
++F + YE+ E +G G +G SA+ + L GQ VA+K IP V+
Sbjct: 44 RSFDVTFDVGDEYEIIETIGNGAYGVVSSARRR---LTGQQVAIKKIPNAFDVV------ 94
Query: 171 PKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYD------AYEDD 224
N + T+ RE+KIL+ H N++ D Y +
Sbjct: 95 ---TNAKRTL-------------------RELKILKHFK-HDNIIAIKDILRPTVPYGEF 131
Query: 225 DNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENF 284
++Y+V++L + L +I+ + E + + Q+L + + H V+HRDLKP N
Sbjct: 132 KSVYVVLDLMESD--LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL 189
Query: 285 LFTSKEENSSLKAIDFGLSDYV--KPDER---LNDIVGSAYYVAPEV---LHRSYGTEAD 336
L EN LK DFG++ + P E + + V + +Y APE+ LH Y D
Sbjct: 190 LVN---ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH-EYTQAID 245
Query: 337 MWSIGVIAYILLCGSRPFWAR-----------------------TESGIFRAVLKADPSF 373
+WS+G I +L + F + + RA +++ P
Sbjct: 246 LWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPR 305
Query: 374 DEAPWPSLSP----EAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
PW ++ P +A+ + R+L + R++AA AL HP+LA HD
Sbjct: 306 QPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 150/348 (43%), Gaps = 79/348 (22%)
Query: 111 KNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHC 170
++F + YE+ E +G G +G SA+ + L GQ VA+K IP V+
Sbjct: 45 RSFDVTFDVGDEYEIIETIGNGAYGVVSSARRR---LTGQQVAIKKIPNAFDVV------ 95
Query: 171 PKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYD------AYEDD 224
N + T+ RE+KIL+ H N++ D Y +
Sbjct: 96 ---TNAKRTL-------------------RELKILKHFK-HDNIIAIKDILRPTVPYGEF 132
Query: 225 DNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENF 284
++Y+V++L + L +I+ + E + + Q+L + + H V+HRDLKP N
Sbjct: 133 KSVYVVLDLMESD--LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL 190
Query: 285 LFTSKEENSSLKAIDFGLSDYV--KPDER---LNDIVGSAYYVAPEV---LHRSYGTEAD 336
L EN LK DFG++ + P E + + V + +Y APE+ LH Y D
Sbjct: 191 LVN---ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH-EYTQAID 246
Query: 337 MWSIGVIAYILLCGSRPFWAR-----------------------TESGIFRAVLKADPSF 373
+WS+G I +L + F + + RA +++ P
Sbjct: 247 LWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPR 306
Query: 374 DEAPWPSLSP----EAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
PW ++ P +A+ + R+L + R++AA AL HP+LA HD
Sbjct: 307 QPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 354
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 119/226 (52%), Gaps = 23/226 (10%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDN--IYIVMELCKGGELLDRILSRGGK----YSEED 254
EV +LR L H N+V++YD D N +YIVME C+GG+L ++++G K EE
Sbjct: 55 EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 255 AKIVMVQILSVVAFCHFQG-----VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD 309
VM Q+ + CH + V+HRDLKP N K+ ++K DFGL+ + D
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ---NVKLGDFGLARILNHD 169
Query: 310 ERL-NDIVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
VG+ YY++PE ++R SY ++D+WS+G + Y L PF A ++ + +
Sbjct: 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 368 KADPSFDEAPWPSLSPEAIDFVKRLLN-KDYRKRLTAAQALSHPWL 412
+ F P+ S E + + R+LN KDY R + + L +P +
Sbjct: 230 EG--KFRRIPY-RYSDELNEIITRMLNLKDYH-RPSVEEILENPLI 271
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 123/247 (49%), Gaps = 37/247 (14%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRILSRGGKYSEEDAKI 257
RE+ IL+ L H N+V+ YD + +V E +LLD + GG S AK
Sbjct: 49 REISILKELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESV-TAKS 104
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-YVKPDERLNDIV 316
++Q+L+ +A+CH + V+HRDLKP+N L + E LK DFGL+ + P + V
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEV 161
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG----IFR------ 364
+ +Y AP+VL + Y T D+WS+G I ++ G+ F +E+ IFR
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221
Query: 365 --------AVLKADPSF---DEAPWPS----LSPEAIDFVKRLLNKDYRKRLTAAQALSH 409
+ K DP+F + PW S L ID + ++L D +R+TA QAL H
Sbjct: 222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281
Query: 410 PWLANSH 416
+ ++
Sbjct: 282 AYFKENN 288
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 123/247 (49%), Gaps = 37/247 (14%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRILSRGGKYSEEDAKI 257
RE+ IL+ L H N+V+ YD + +V E +LLD + GG S AK
Sbjct: 49 REISILKELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESV-TAKS 104
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-YVKPDERLNDIV 316
++Q+L+ +A+CH + V+HRDLKP+N L + E LK DFGL+ + P + V
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEV 161
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG----IFR------ 364
+ +Y AP+VL + Y T D+WS+G I ++ G+ F +E+ IFR
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPN 221
Query: 365 --------AVLKADPSF---DEAPWPS----LSPEAIDFVKRLLNKDYRKRLTAAQALSH 409
+ K DP+F + PW S L ID + ++L D +R+TA QAL H
Sbjct: 222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281
Query: 410 PWLANSH 416
+ ++
Sbjct: 282 AYFKENN 288
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 119/226 (52%), Gaps = 23/226 (10%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDN--IYIVMELCKGGELLDRILSRGGK----YSEED 254
EV +LR L H N+V++YD D N +YIVME C+GG+L ++++G K EE
Sbjct: 55 EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 255 AKIVMVQILSVVAFCHFQG-----VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD 309
VM Q+ + CH + V+HRDLKP N K+ ++K DFGL+ + D
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ---NVKLGDFGLARILNHD 169
Query: 310 ERL-NDIVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
VG+ YY++PE ++R SY ++D+WS+G + Y L PF A ++ + +
Sbjct: 170 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 368 KADPSFDEAPWPSLSPEAIDFVKRLLN-KDYRKRLTAAQALSHPWL 412
+ F P+ S E + + R+LN KDY R + + L +P +
Sbjct: 230 EG--KFRRIPY-RYSDELNEIITRMLNLKDYH-RPSVEEILENPLI 271
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 37/247 (14%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRILSRGGKYSEEDAKI 257
RE+ IL+ L H N+V+ YD + +V E +LLD + GG S AK
Sbjct: 49 REISILKELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESV-TAKS 104
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-YVKPDERLNDIV 316
++Q+L+ +A+CH + V+HRDLKP+N L + E LK DFGL+ + P + +
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEI 161
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG----IFR------ 364
+ +Y AP+VL + Y T D+WS+G I ++ G+ F +E+ IFR
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221
Query: 365 --------AVLKADPSF---DEAPWPS----LSPEAIDFVKRLLNKDYRKRLTAAQALSH 409
+ K DP+F + PW S L ID + ++L D +R+TA QAL H
Sbjct: 222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281
Query: 410 PWLANSH 416
+ ++
Sbjct: 282 AYFKENN 288
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ ++R + N+V + D+Y D +++VME GG L D + E
Sbjct: 63 ELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQI 119
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLND 314
V + L + F H V+HRD+K +N L + S+K DFG + P++ + +
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSX 176
Query: 315 IVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+VG+ Y++APEV+ R +YG + D+WS+G++A ++ G P+ E+ + L A
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGT 234
Query: 374 DEAPWPS-LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
E P LS DF+ R L D KR +A + + H +L
Sbjct: 235 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 116/254 (45%), Gaps = 43/254 (16%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL--LDRILSRGGKYSEEDAKI 257
RE+++L+ L H NLV + + +++V E C L LDR RG E K
Sbjct: 51 REIRMLKQLK-HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR-YQRG--VPEHLVKS 106
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVK-PDERLNDIV 316
+ Q L V FCH +HRD+KPEN L T ++S +K DFG + + P + +D V
Sbjct: 107 ITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGPSDYYDDEV 163
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFW------------------- 355
+ +Y +PE+L YG D+W+IG + LL G P W
Sbjct: 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV-PLWPGKSDVDQLYLIRKTLGDL 222
Query: 356 ------ARTESGIFRAVLKADPSFDEAP----WPSLSPEAIDFVKRLLNKDYRKRLTAAQ 405
+ + F V DP D P +P++S A+ +K L+ D +RLT Q
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPE-DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQ 281
Query: 406 ALSHPWLANSHDVK 419
L HP+ N +++
Sbjct: 282 LLHHPYFENIREIE 295
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 12/227 (5%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEED 254
+ED E++IL A H +V+ AY D ++I++E C GG + +L +E
Sbjct: 52 LEDYIVEIEIL-ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ 110
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS-DYVKPDERLN 313
++V Q+L + F H + ++HRDLK N L T + ++ DFG+S +K ++ +
Sbjct: 111 IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRD 167
Query: 314 DIVGSAYYVAPEVL------HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
+G+ Y++APEV+ Y +AD+WS+G+ + P + +
Sbjct: 168 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 227
Query: 368 KADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
K+DP P S E DF+K L+K+ R +AAQ L HP++++
Sbjct: 228 KSDPPTLLTP-SKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 273
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 12/227 (5%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEED 254
+ED E++IL A H +V+ AY D ++I++E C GG + +L +E
Sbjct: 60 LEDYIVEIEIL-ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ 118
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS-DYVKPDERLN 313
++V Q+L + F H + ++HRDLK N L T + ++ DFG+S +K ++ +
Sbjct: 119 IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRD 175
Query: 314 DIVGSAYYVAPEVL------HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
+G+ Y++APEV+ Y +AD+WS+G+ + P + +
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 235
Query: 368 KADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
K+DP P S E DF+K L+K+ R +AAQ L HP++++
Sbjct: 236 KSDPPTLLTP-SKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 135/311 (43%), Gaps = 48/311 (15%)
Query: 117 KQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPK--MIGVIFLQ--VHCPK 172
+ F A Y LG +G+G FG + L+ VA+KVIP+ ++G L V CP
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQ---VAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 173 HENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVME 232
E L+ A GH +++ D +E + +V+E
Sbjct: 84 ----------EVALLWKVGAGG---------------GHPGVIRLLDWFETQEGFMLVLE 118
Query: 233 LCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEEN 292
+ L ++ G E ++ Q+++ + CH +GVVHRD+K EN L +
Sbjct: 119 RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLR--R 176
Query: 293 SSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCG 350
K IDFG S + DE D G+ Y PE + H+ + A +WS+G++ Y ++CG
Sbjct: 177 GCAKLIDFG-SGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
Query: 351 SRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHP 410
PF E +L+A+ F +SP+ ++R L R + + L P
Sbjct: 236 DIPFERDQE------ILEAELHFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILLDP 285
Query: 411 WLAN-SHDVKI 420
W+ + DV +
Sbjct: 286 WMQTPAEDVPL 296
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E + E+ ++R + N+V + D+Y D +++VME GG L D + E
Sbjct: 63 ELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQI 119
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLND 314
V + L + F H V+HR++K +N L + S+K DFG + P++ + +
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRNIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRST 176
Query: 315 IVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSF 373
+VG+ Y++APEV+ R +YG + D+WS+G++A ++ G P+ E+ + L A
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGT 234
Query: 374 DEAPWPS-LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
E P LS DF+ R L D KR +A + + H +L
Sbjct: 235 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ E +L H LV + +++ D +Y V++ GGEL L R + E A+
Sbjct: 85 IMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYH-LQRERCFLEPRARF 143
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLNDIV 316
+I S + + H +V+RDLKPEN L S+ + DFGL + ++ + +
Sbjct: 144 YAAEIASALGYLHSLNIVYRDLKPENILLDSQ---GHIVLTDFGLCKENIEHNSTTSTFC 200
Query: 317 GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDE 375
G+ Y+APEVLH+ Y D W +G + Y +L G PF++R + ++ +L
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK- 259
Query: 376 APWPSLSPEAIDFVKRLLNKDYRKRLTA 403
P+++ A ++ LL KD KRL A
Sbjct: 260 ---PNITNSARHLLEGLLQKDRTKRLGA 284
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 44/253 (17%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+++L+ L H+N++ D + ED +Y+V L G +L + + S+ S+E
Sbjct: 76 RELRLLKHLK-HENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQA--LSDE 131
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+ ++ Q+L + + H G++HRDLKP N + E+S L+ +DFGL+ + DE +
Sbjct: 132 HVQFLVYQLLRGLKYIHSAGIIHRDLKPSN---VAVNEDSELRILDFGLAR--QADEEMT 186
Query: 314 DIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPF----------------- 354
V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG 246
Query: 355 ------WARTESGIFRAVLKADPSFDEAPWPSL----SPEAIDFVKRLLNKDYRKRLTAA 404
A+ S R +++ P + S+ +P AID + R+L D +R++AA
Sbjct: 247 TPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAA 306
Query: 405 QALSHPWLANSHD 417
+AL+H + + HD
Sbjct: 307 EALAHAYFSQYHD 319
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N L E+ L+ ID+GL+++ P +
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI--DHEHRKLRLIDWGLAEFYHPGQ 186
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPYF 324
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 145/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 69
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 70 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 117
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+S LK +DFGL
Sbjct: 118 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGL 173
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 174 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 232 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 291
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 292 VLDSDKRITAAQALAHAYFAQYHD 315
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 145/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 73
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 74 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 121
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+S LK +DFGL
Sbjct: 122 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGL 177
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 178 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 236 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 295
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 296 VLDSDKRITAAQALAHAYFAQYHD 319
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
+ + L + +G+G FG A+ KK + Q A+K + K + ++ V C
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTN---QFFAIKALKKDVVLMDDDVEC--------- 63
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
T + E ++L H L + ++ +N++ VME GG+L
Sbjct: 64 -----------TMV-------EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL 105
Query: 240 LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
+ I S K+ A +I+ + F H +G+V+RDLK +N L +++ +K D
Sbjct: 106 MYHIQS-CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIAD 161
Query: 300 FGL-SDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWAR 357
FG+ + + D + N G+ Y+APE+L + Y D WS GV+ Y +L G PF +
Sbjct: 162 FGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
E +F ++ +P + W L EA D + +L ++ KRL
Sbjct: 222 DEEELFHSIRMDNPFYPR--W--LEKEAKDLLVKLFVREPEKRL 261
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+S LK +DFGL
Sbjct: 116 IV-KSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 CRHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 75/330 (22%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
Y+ VG G +G CS+ K LK +AVK + + I +H +
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLK---IAVKKLSRPFQSI---IHAKR---------- 96
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKG 236
RE+++L+ + H+N++ D + E+ +++Y+V L
Sbjct: 97 ---------------TYRELRLLKHMK-HENVIGLLDVFTPATSLEEFNDVYLVTHLM-- 138
Query: 237 GELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLK 296
G L+ I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK
Sbjct: 139 GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELK 194
Query: 297 AIDFGLSDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPF 354
+DFGL+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 195 ILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
Query: 355 -----------------------WARTESGIFRAVLKADPSFDEAPWPSL----SPEAID 387
+R S R + + P + + + +P A+D
Sbjct: 253 PGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVD 312
Query: 388 FVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
++++L D KR+TA++AL+HP+ + HD
Sbjct: 313 LLEKMLVLDTDKRITASEALAHPYFSQYHD 342
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 186
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 186
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 186
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 185
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 186
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 134 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 191
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 192 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 251
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 252 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 311
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 312 YDHQSRLTAREAMEHPYF 329
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 186
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 186
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 186
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 186
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 185
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPYF 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 127 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 184
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 304
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 305 YDHQSRLTAREAMEHPYF 322
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 120/223 (53%), Gaps = 14/223 (6%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E+ RREV +L A H N+VQ+ +++E++ ++YIVM+ C+GG+L RI ++ G +ED
Sbjct: 68 EESRREVAVL-ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ 126
Query: 256 KI-VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERL-N 313
+ VQI + H + ++HRD+K +N T ++ +++ DFG++ + L
Sbjct: 127 ILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIARVLNSTVELAR 183
Query: 314 DIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPS 372
+G+ YY++PE+ ++ Y ++D+W++G + Y L F A + + ++ S
Sbjct: 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG--S 241
Query: 373 FDEAPWPSL--SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
F P SL S + V +L ++ R R + L ++A
Sbjct: 242 F---PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIA 281
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 134/285 (47%), Gaps = 40/285 (14%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
H+E+ +G+G FG C + +++ K+ N Q +
Sbjct: 16 HFEILRAIGKGSFGKVCIVQKNDTK--------------------KMYAMKYMNKQKCV- 54
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
+ +V +E++I++ L H LV + +++D++++++V++L GG+L
Sbjct: 55 ---------ERNEVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY 104
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
L + + EE K+ + +++ + + Q ++HRD+KP+N L +E+ + DF
Sbjct: 105 H-LQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFN 160
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVLHR----SYGTEADMWSIGVIAYILLCGSRPFWAR 357
++ + + ++ + G+ Y+APE+ Y D WS+GV AY LL G RP+ R
Sbjct: 161 IAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220
Query: 358 TESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLT 402
+ + V + + P + S E + +K+LL + +R +
Sbjct: 221 SSTSSKEIVHTFETTVVTYP-SAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + M +IL + +CH G++HRD+KP N + E+ L+ ID+GL+++ P +
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQ 186
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
N V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 361 ----------GIFRAVLKADPSFDE-------APWPS---------LSPEAIDFVKRLLN 394
I + ++ DP F++ W +SPEA+DF+ +LL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 395 KDYRKRLTAAQALSHPWL 412
D++ RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPYF 324
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ + Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + K I +H +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLR---VAVKKLSKPFQSI---IHAKR---------------- 79
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 80 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 127
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 128 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 183
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 184 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 242 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 301
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 302 VLDSDKRITAAQALAHAYFAQYHD 325
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 123/253 (48%), Gaps = 44/253 (17%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+++L+ L H+N++ D + ED +Y+V L G L+ I+ + S+E
Sbjct: 76 RELRLLKHLK-HENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIV-KCQALSDE 131
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+ ++ Q+L + + H G++HRDLKP N + E+S L+ +DFGL+ + DE +
Sbjct: 132 HVQFLVYQLLRGLKYIHSAGIIHRDLKPSN---VAVNEDSELRILDFGLAR--QADEEMT 186
Query: 314 DIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPF----------------- 354
V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG 246
Query: 355 ------WARTESGIFRAVLKADPSFDEAPWPSL----SPEAIDFVKRLLNKDYRKRLTAA 404
A+ S R +++ P + S+ +P AID + R+L D +R++AA
Sbjct: 247 TPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAA 306
Query: 405 QALSHPWLANSHD 417
+AL+H + + HD
Sbjct: 307 EALAHAYFSQYHD 319
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 20/230 (8%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAY--EDDDNIYIVMELCKGG--ELLDRILSRGGKYSE 252
+V++E+++LR L HKN++Q D E+ +Y+VME C G E+LD + + ++
Sbjct: 52 NVKKEIQLLRRLR-HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK--RFPV 108
Query: 253 EDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP---D 309
A Q++ + + H QG+VH+D+KP N L T+ +LK G+++ + P D
Sbjct: 109 CQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPFAAD 165
Query: 310 ERLNDIVGSAYYVAPEV---LHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAV 366
+ GS + PE+ L G + D+WS GV Y + G PF +F +
Sbjct: 166 DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI 225
Query: 367 LKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSH 416
K + P LS D +K +L + KR + Q H W H
Sbjct: 226 GKGSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 78
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 79 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 126
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 127 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGL 182
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 183 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 240
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 241 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 300
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 301 VLDSDKRITAAQALAHAYFAQYHD 324
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 78
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 79 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 126
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 127 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 182
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 183 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 240
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 241 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 300
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 301 VLDSDKRITAAQALAHAYFAQYHD 324
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 72
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 73 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 120
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 121 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 176
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 177 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 235 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 294
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 295 VLDSDKRITAAQALAHAYFAQYHD 318
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 69
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 70 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 117
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 118 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 173
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 174 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 232 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 291
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 292 VLDSDKRITAAQALAHAYFAQYHD 315
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 66
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 67 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 114
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 115 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 170
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 171 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 228
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 229 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 288
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 289 VLDSDKRITAAQALAHAYFAQYHD 312
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 73
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 74 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 121
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 122 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 177
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 178 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 236 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 295
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 296 VLDSDKRITAAQALAHAYFAQYHD 319
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 72
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 73 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 120
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 121 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGL 176
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 177 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 235 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 294
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 295 VLDSDKRITAAQALAHAYFAQYHD 318
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 69
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 70 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 117
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 118 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 173
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 174 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 232 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 291
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 292 VLDSDKRITAAQALAHAYFAQYHD 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 74
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 75 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 122
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 123 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 178
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 179 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 237 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 296
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 297 VLDSDKRITAAQALAHAYFAQYHD 320
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 86
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 87 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 134
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 135 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 190
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 191 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 248
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 249 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 308
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 309 VLDSDKRITAAQALAHAYFAQYHD 332
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 79
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 80 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 127
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 128 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 183
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 184 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 242 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 301
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 302 VLDSDKRITAAQALAHAYFAQYHD 325
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 79
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 80 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 127
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 128 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 183
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 184 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 242 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 301
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 302 VLDSDKRITAAQALAHAYFAQYHD 325
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 90
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 91 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 138
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 139 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 194
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 195 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 252
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 253 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 312
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 313 VLDSDKRITAAQALAHAYFAQYHD 336
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 72
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 73 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 120
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 121 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 176
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 177 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 235 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 294
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 295 VLDSDKRITAAQALAHAYFAQYHD 318
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 69
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 70 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 117
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 118 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 173
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 174 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 232 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 291
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 292 VLDSDKRITAAQALAHAYFAQYHD 315
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 73
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 74 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 121
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 122 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 177
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 178 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 236 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 295
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 296 VLDSDKRITAAQALAHAYFAQYHD 319
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 90
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 91 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 138
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 139 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 194
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 195 ARHT--DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 252
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 253 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 312
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 313 VLDSDKRITAAQALAHAYFAQYHD 336
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 87
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 88 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 135
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 136 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 191
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 192 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 250 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 309
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 310 VLDSDKRITAAQALAHAYFAQYHD 333
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 63
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 64 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 111
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 112 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 167
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 168 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 226 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 285
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 286 VLDSDKRITAAQALAHAYFAQYHD 309
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 64
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 65 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 112
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 113 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 168
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 169 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 226
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 227 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 286
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 287 VLDSDKRITAAQALAHAYFAQYHD 310
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 141/330 (42%), Gaps = 68/330 (20%)
Query: 115 FSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHE 174
+ + + Y+ E+VG G +G AK +G + VA+K I
Sbjct: 15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI----VALKRIR---------------- 54
Query: 175 NHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELC 234
LD +TAI RE+ +L+ L H N+V D + + +V E
Sbjct: 55 ------LDAEDEGIPSTAI------REISLLKELH-HPNIVSLIDVIHSERCLTLVFEFM 101
Query: 235 KGGELLDRILSRGGK-YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENS 293
+ L ++L + KI + Q+L VA CH ++HRDLKP+N L S +
Sbjct: 102 EKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DG 156
Query: 294 SLKAIDFGLSD-YVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCG 350
+LK DFGL+ + P V + +Y AP+VL + Y T D+WSIG I ++ G
Sbjct: 157 ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
Query: 351 SRPFWARTESG----IFRAVLKADPS------------------FDEAPWPSLSP----E 384
F T+ IF + +P F++ PW S+ P E
Sbjct: 217 KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQE 276
Query: 385 AIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
ID + +L D KR++A A++HP+ +
Sbjct: 277 GIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 141/330 (42%), Gaps = 68/330 (20%)
Query: 115 FSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHE 174
+ + + Y+ E+VG G +G AK +G + VA+K I
Sbjct: 15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI----VALKRIR---------------- 54
Query: 175 NHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELC 234
LD +TAI RE+ +L+ L H N+V D + + +V E
Sbjct: 55 ------LDAEDEGIPSTAI------REISLLKELH-HPNIVSLIDVIHSERCLTLVFEFM 101
Query: 235 KGGELLDRILSRGGK-YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENS 293
+ L ++L + KI + Q+L VA CH ++HRDLKP+N L S +
Sbjct: 102 EKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DG 156
Query: 294 SLKAIDFGLSD-YVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCG 350
+LK DFGL+ + P V + +Y AP+VL + Y T D+WSIG I ++ G
Sbjct: 157 ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
Query: 351 SRPFWARTESG----IFRAVLKADPS------------------FDEAPWPSLSP----E 384
F T+ IF + +P F++ PW S+ P E
Sbjct: 217 KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQE 276
Query: 385 AIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
ID + +L D KR++A A++HP+ +
Sbjct: 277 GIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 65
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 66 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 113
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 114 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 169
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 170 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 227
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 228 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 287
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 288 VLDSDKRITAAQALAHAYFAQYHD 311
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 64
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 65 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 112
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 113 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 168
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 169 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 226
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 227 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 286
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 287 VLDSDKRITAAQALAHAYFAQYHD 310
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G C+A K L+ VAVK + + I +H +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 72
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 73 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 120
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 121 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGL 176
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 177 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 235 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 294
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 295 VLDSDKRITAAQALAHAYFAQYHD 318
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 26 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 63
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 64 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 111
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 112 IV-KCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 167
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 168 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 226 DQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 285
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 286 VLDSDKRITAAQALAHAYFAQYHD 309
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 43/252 (17%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
RE+ +++ L H+N+V+ YD ++ + +V E +L + SR + ++ +
Sbjct: 52 REISLMKELK-HENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNL 109
Query: 260 V-----QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-YVKPDERLN 313
V Q+L +AFCH ++HRDLKP+N L + + LK DFGL+ + P +
Sbjct: 110 VKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFS 166
Query: 314 DIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADP 371
V + +Y AP+VL R+Y T D+WS G I ++ G F + + +
Sbjct: 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG 226
Query: 372 SFDEAPWPS----------------------LSPEA--------IDFVKRLLNKDYRKRL 401
+ +E+ WPS L P +DF+ LL + RL
Sbjct: 227 TPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRL 286
Query: 402 TAAQALSHPWLA 413
+A QAL HPW A
Sbjct: 287 SAKQALHHPWFA 298
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 34/244 (13%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
RE+ +L+ L HKN+V+ +D D + +V E C +L S G E K +
Sbjct: 50 REICLLKELK-HKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFL 107
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-YVKPDERLNDIVGS 318
Q+L + FCH + V+HRDLKP+N L N LK DFGL+ + P + V +
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLADFGLARAFGIPVRCYSAEVVT 164
Query: 319 AYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTE-----SGIFRAV----- 366
+Y P+VL + Y T DMWS G I L +RP + + IFR +
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTE 224
Query: 367 -----LKADPSFDEAPW-----------PSLSPEAIDFVKRLLNKDYRKRLTAAQALSHP 410
+ P + P P L+ D ++ LL + +R++A +AL HP
Sbjct: 225 EQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284
Query: 411 WLAN 414
+ ++
Sbjct: 285 YFSD 288
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 25/237 (10%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEED 254
I+ V+ E + + H LV + ++ + ++ V+E GG+L+ + R K EE
Sbjct: 96 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH-MQRQRKLPEEH 154
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLN 313
A+ +I + + H +G+++RDLK +N L S+ +K D+G+ + ++P + +
Sbjct: 155 ARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPGDTTS 211
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPF---------WARTESGIF 363
G+ Y+APE+L YG D W++GV+ + ++ G PF TE +F
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271
Query: 364 RAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTA------AQALSHPWLAN 414
+ +L+ SLS +A +K LNKD ++RL A HP+ N
Sbjct: 272 QVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 36 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 73
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 74 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 121
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 122 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 177
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 178 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 236 DQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 295
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 296 VLDSDKRITAAQALAHAYFAQYHD 319
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 50 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 87
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 88 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 135
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 136 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 191
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 192 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 250 DQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 309
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 310 VLDSDKRITAAQALAHAYFAQYHD 333
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 49 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 86
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 87 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 134
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 135 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 190
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 191 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 248
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 249 DQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 308
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 309 VLDSDKRITAAQALAHAYFAQYHD 332
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 26 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 63
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 64 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 111
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 112 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 167
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 168 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 226 DQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 285
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 286 VLDSDKRITAAQALAHAYFAQYHD 309
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 26 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 63
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 64 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 111
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 112 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 167
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 168 ARHT--DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 226 DQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 285
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 286 VLDSDKRITAAQALAHAYFAQYHD 309
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 40 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 77
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 78 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 125
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 126 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 181
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 182 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 239
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 240 DQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 299
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 300 VLDSDKRITAAQALAHAYFAQYHD 323
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 141/334 (42%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL A H+N++ D E ++YIV +L + L ++
Sbjct: 68 -------QRTLREIKILLAFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 117
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + S LK DFGL+
Sbjct: 118 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TSDLKICDFGLA 173
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 174 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 232
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 233 KHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 292
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+LA +D PSD
Sbjct: 293 DKMLTFNPHKRIEVEQALAHPYLAQYYD---PSD 323
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 25/237 (10%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEED 254
I+ V+ E + + H LV + ++ + ++ V+E GG+L+ + R K EE
Sbjct: 53 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH-MQRQRKLPEEH 111
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLN 313
A+ +I + + H +G+++RDLK +N L S+ +K D+G+ + ++P + +
Sbjct: 112 ARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPGDTTS 168
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPF---------WARTESGIF 363
G+ Y+APE+L YG D W++GV+ + ++ G PF TE +F
Sbjct: 169 XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 228
Query: 364 RAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTA------AQALSHPWLAN 414
+ +L+ SLS +A +K LNKD ++RL A HP+ N
Sbjct: 229 QVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 25/237 (10%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEED 254
I+ V+ E + + H LV + ++ + ++ V+E GG+L+ + R K EE
Sbjct: 49 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH-MQRQRKLPEEH 107
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLN 313
A+ +I + + H +G+++RDLK +N L S+ +K D+G+ + ++P + +
Sbjct: 108 ARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPGDTTS 164
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPF---------WARTESGIF 363
G+ Y+APE+L YG D W++GV+ + ++ G PF TE +F
Sbjct: 165 XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 224
Query: 364 RAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTA------AQALSHPWLAN 414
+ +L+ SLS +A +K LNKD ++RL A HP+ N
Sbjct: 225 QVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 277
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 50 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 87
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 88 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 135
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 136 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 191
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 192 ARHT--DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 250 DQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 309
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 310 VLDSDKRITAAQALAHAYFAQYHD 333
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 44/253 (17%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+++L+ L H+N++ D + ED +Y+V L G L+ I+ + S+E
Sbjct: 68 RELRLLKHLK-HENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIV-KCQALSDE 123
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+ ++ Q+L + + H G++HRDLKP N + E+ L+ +DFGL+ + DE +
Sbjct: 124 HVQFLVYQLLRGLKYIHSAGIIHRDLKPSN---VAVNEDCELRILDFGLAR--QADEEMT 178
Query: 314 DIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPF----------------- 354
V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG 238
Query: 355 ------WARTESGIFRAVLKADPSFDEAPWPSL----SPEAIDFVKRLLNKDYRKRLTAA 404
A+ S R +++ P + S+ +P AID + R+L D +R++AA
Sbjct: 239 TPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAA 298
Query: 405 QALSHPWLANSHD 417
+AL+H + + HD
Sbjct: 299 EALAHAYFSQYHD 311
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + + ++L + +CH QG++HRD+KP N + E L+ ID+GL+++ P +
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGK 181
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG------- 361
N V S Y+ PE+L + Y DMWS+G + ++ PF+ ++
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
Query: 362 -----------IFRAVLKADPSFD-------EAPWPS---------LSPEAIDFVKRLLN 394
+ + ++ DP + PW +SPEAIDF+ +LL
Sbjct: 242 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 301
Query: 395 KDYRKRLTAAQALSHPWL 412
D+++RLTA +A++HP+
Sbjct: 302 YDHQERLTALEAMTHPYF 319
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +D+GL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDYGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + + ++L + +CH QG++HRD+KP N + E L+ ID+GL+++ P +
Sbjct: 125 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGK 182
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG------- 361
N V S Y+ PE+L + Y DMWS+G + ++ PF+ ++
Sbjct: 183 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 242
Query: 362 -----------IFRAVLKADPSFD-------EAPWPS---------LSPEAIDFVKRLLN 394
+ + ++ DP + PW +SPEAIDF+ +LL
Sbjct: 243 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 302
Query: 395 KDYRKRLTAAQALSHPWL 412
D+++RLTA +A++HP+
Sbjct: 303 YDHQERLTALEAMTHPYF 320
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + + ++L + +CH QG++HRD+KP N + E L+ ID+GL+++ P +
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGK 180
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG------- 361
N V S Y+ PE+L + Y DMWS+G + ++ PF+ ++
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 362 -----------IFRAVLKADPSFD-------EAPWPS---------LSPEAIDFVKRLLN 394
+ + ++ DP + PW +SPEAIDF+ +LL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 395 KDYRKRLTAAQALSHPWL 412
D+++RLTA +A++HP+
Sbjct: 301 YDHQERLTALEAMTHPYF 318
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + + ++L + +CH QG++HRD+KP N + E L+ ID+GL+++ P +
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGK 180
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG------- 361
N V S Y+ PE+L + Y DMWS+G + ++ PF+ ++
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 362 -----------IFRAVLKADPSFD-------EAPWPS---------LSPEAIDFVKRLLN 394
+ + ++ DP + PW +SPEAIDF+ +LL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 395 KDYRKRLTAAQALSHPWL 412
D+++RLTA +A++HP+
Sbjct: 301 YDHQERLTALEAMTHPYF 318
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + + ++L + +CH QG++HRD+KP N + E L+ ID+GL+++ P +
Sbjct: 144 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGK 201
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG------- 361
N V S Y+ PE+L + Y DMWS+G + ++ PF+ ++
Sbjct: 202 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 261
Query: 362 -----------IFRAVLKADPSFD-------EAPWPS---------LSPEAIDFVKRLLN 394
+ + ++ DP + PW +SPEAIDF+ +LL
Sbjct: 262 KVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 321
Query: 395 KDYRKRLTAAQALSHPWL 412
D+++RLTA +A++HP+
Sbjct: 322 YDHQERLTALEAMTHPYF 339
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + + ++L + +CH QG++HRD+KP N + E L+ ID+GL+++ P +
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGK 181
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG------- 361
N V S Y+ PE+L + Y DMWS+G + ++ PF+ ++
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
Query: 362 -----------IFRAVLKADPSFD-------EAPWPS---------LSPEAIDFVKRLLN 394
+ + ++ DP + PW +SPEAIDF+ +LL
Sbjct: 242 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 301
Query: 395 KDYRKRLTAAQALSHPWL 412
D+++RLTA +A++HP+
Sbjct: 302 YDHQERLTALEAMTHPYF 319
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + + ++L + +CH QG++HRD+KP N + E L+ ID+GL+++ P +
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGK 180
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG------- 361
N V S Y+ PE+L + Y DMWS+G + ++ PF+ ++
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 362 -----------IFRAVLKADPSFD-------EAPWPS---------LSPEAIDFVKRLLN 394
+ + ++ DP + PW +SPEAIDF+ +LL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 395 KDYRKRLTAAQALSHPWL 412
D+++RLTA +A++HP+
Sbjct: 301 YDHQERLTALEAMTHPYF 318
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + + ++L + +CH QG++HRD+KP N + E L+ ID+GL+++ P +
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGK 180
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG------- 361
N V S Y+ PE+L + Y DMWS+G + ++ PF+ ++
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 362 -----------IFRAVLKADPSFD-------EAPWPS---------LSPEAIDFVKRLLN 394
+ + ++ DP + PW +SPEAIDF+ +LL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 395 KDYRKRLTAAQALSHPWL 412
D+++RLTA +A++HP+
Sbjct: 301 YDHQERLTALEAMTHPYF 318
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + + ++L + +CH QG++HRD+KP N + E L+ ID+GL+++ P +
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGK 180
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG------- 361
N V S Y+ PE+L + Y DMWS+G + ++ PF+ ++
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 362 -----------IFRAVLKADPSFD-------EAPWPS---------LSPEAIDFVKRLLN 394
+ + ++ DP + PW +SPEAIDF+ +LL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 395 KDYRKRLTAAQALSHPWL 412
D+++RLTA +A++HP+
Sbjct: 301 YDHQERLTALEAMTHPYF 318
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 38/198 (19%)
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
++ D + + ++L + +CH QG++HRD+KP N + E L+ ID+GL+++ P +
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGK 180
Query: 311 RLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG------- 361
N V S Y+ PE+L + Y DMWS+G + ++ PF+ ++
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 362 -----------IFRAVLKADPSFD-------EAPWPS---------LSPEAIDFVKRLLN 394
+ + ++ DP + PW +SPEAIDF+ +LL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 395 KDYRKRLTAAQALSHPWL 412
D+++RLTA +A++HP+
Sbjct: 301 YDHQERLTALEAMTHPYF 318
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 38/235 (16%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLD---RILSRG----GKYSEEDAKIVMVQIL 263
H N+V +Y ++ D +++VM+L GG +LD I+++G G E ++ ++L
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 264 SVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP--DERLNDI----VG 317
+ + H G +HRD+K N L E+ S++ DFG+S ++ D N + VG
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 318 SAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDE 375
+ ++APEV+ R Y +AD+WS G+ A L G+ P+ + L+ DP
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP---- 244
Query: 376 APWPSLSPEAID-------------FVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
PSL D + L KD KR TAA+ L H + + +
Sbjct: 245 ---PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN 296
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 25/237 (10%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEED 254
I+ V+ E + + H LV + ++ + ++ V+E GG+L+ + R K EE
Sbjct: 64 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH-MQRQRKLPEEH 122
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLN 313
A+ +I + + H +G+++RDLK +N L S+ +K D+G+ + ++P + +
Sbjct: 123 ARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPGDTTS 179
Query: 314 DIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPF---------WARTESGIF 363
G+ Y+APE+L YG D W++GV+ + ++ G PF TE +F
Sbjct: 180 XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 239
Query: 364 RAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTA------AQALSHPWLAN 414
+ +L+ S+S +A +K LNKD ++RL A HP+ N
Sbjct: 240 QVILEKQIRIPR----SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRN 292
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 38/195 (19%)
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
D + M ++L + +CH +G++HRD+KP N + +++ L+ ID+GL+++ P + N
Sbjct: 133 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYN 190
Query: 314 DIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES----------- 360
V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 191 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVL 250
Query: 361 ------GIFRAV-LKADPSFDE-------APWPS---------LSPEAIDFVKRLLNKDY 397
G + + DP F++ W + +SPEA+D + +LL D+
Sbjct: 251 GTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDH 310
Query: 398 RKRLTAAQALSHPWL 412
++RLTA +A+ HP+
Sbjct: 311 QQRLTAKEAMEHPYF 325
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 38/233 (16%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLD---RILSRG----GKYSEEDAKIVMVQIL 263
H N+V +Y ++ D +++VM+L GG +LD I+++G G E ++ ++L
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 264 SVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDY------VKPDERLNDIVG 317
+ + H G +HRD+K N L E+ S++ DFG+S + + ++ VG
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 318 SAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDE 375
+ ++APEV+ R Y +AD+WS G+ A L G+ P+ + L+ DP
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP---- 239
Query: 376 APWPSLSPEAID-------------FVKRLLNKDYRKRLTAAQALSHPWLANS 415
PSL D + L KD KR TAA+ L H + +
Sbjct: 240 ---PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 38/195 (19%)
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
D + M ++L + +CH +G++HRD+KP N + +++ L+ ID+GL+++ P + N
Sbjct: 138 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYN 195
Query: 314 DIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES----------- 360
V S Y+ PE+L ++ Y DMWS+G + ++ PF+ ++
Sbjct: 196 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVL 255
Query: 361 ------GIFRAV-LKADPSFDE-------APWPS---------LSPEAIDFVKRLLNKDY 397
G + + DP F++ W + +SPEA+D + +LL D+
Sbjct: 256 GTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDH 315
Query: 398 RKRLTAAQALSHPWL 412
++RLTA +A+ HP+
Sbjct: 316 QQRLTAKEAMEHPYF 330
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQG 273
L Q + ++ D +Y VME GG+L+ I + G++ E A +I + F +G
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-QQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLNDIVGSAYYVAPEVL-HRSY 331
+++RDLK +N + S+ +K DFG+ + + G+ Y+APE++ ++ Y
Sbjct: 463 IIYRDLKLDNVMLDSE---GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKR 391
G D W+ GV+ Y +L G PF E +F+++++ + ++ + S+S EA+ K
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKG 575
Query: 392 LLNKDYRKRL 401
L+ K KRL
Sbjct: 576 LMTKHPGKRL 585
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 74
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 75 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 122
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 123 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 178
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + + + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 179 ARHTA--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 237 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 296
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 297 VLDSDKRITAAQALAHAYFAQYHD 320
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 74
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 75 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 122
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 123 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 178
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + + + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 179 ARHTA--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 237 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 296
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 297 VLDSDKRITAAQALAHAYFAQYHD 320
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 140/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL A H+N++ D E ++YIV +L + L ++
Sbjct: 68 -------QRTLREIKILLAFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 117
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 118 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 173
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 174 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 232
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 233 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 292
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+LA +D PSD
Sbjct: 293 DKMLTFNPHKRIEVEQALAHPYLAQYYD---PSD 323
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 74
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 75 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 122
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DFGL
Sbjct: 123 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGL 178
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + + + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 179 ARHTA--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 237 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 296
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 297 VLDSDKRITAAQALAHAYFAQYHD 320
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 34/244 (13%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
RE+ +L+ L HKN+V+ +D D + +V E C +L S G E K +
Sbjct: 50 REICLLKELK-HKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFL 107
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-YVKPDERLNDIVGS 318
Q+L + FCH + V+HRDLKP+N L N LK +FGL+ + P + V +
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFGIPVRCYSAEVVT 164
Query: 319 AYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTE-----SGIFRAV----- 366
+Y P+VL + Y T DMWS G I L RP + + IFR +
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 224
Query: 367 -----LKADPSFDEAPW-----------PSLSPEAIDFVKRLLNKDYRKRLTAAQALSHP 410
+ P + P P L+ D ++ LL + +R++A +AL HP
Sbjct: 225 EQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284
Query: 411 WLAN 414
+ ++
Sbjct: 285 YFSD 288
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK + FGL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILGFGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQG 273
L Q + ++ D +Y VME GG+L+ I + G++ E A +I + F +G
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-QQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGL-SDYVKPDERLNDIVGSAYYVAPEVL-HRSY 331
+++RDLK +N + S+ +K DFG+ + + G+ Y+APE++ ++ Y
Sbjct: 142 IIYRDLKLDNVMLDSE---GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKR 391
G D W+ GV+ Y +L G PF E +F+++++ + ++ + S+S EA+ K
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKG 254
Query: 392 LLNKDYRKRL 401
L+ K KRL
Sbjct: 255 LMTKHPGKRL 264
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 124/255 (48%), Gaps = 44/255 (17%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNI------YIVMELCKGGELLDRILSRGGKYSEE 253
RE+++L+ + H+N++ D + D+ + Y+VM G L +++ + K E+
Sbjct: 73 RELRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLM-KHEKLGED 128
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+ ++ Q+L + + H G++HRDLKP N + E+ LK +DFGL+ + D +
Sbjct: 129 RIQFLVYQMLKGLRYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QADSEMX 183
Query: 314 DIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSR------------------- 352
V + +Y APEV+ Y D+WS+G I ++ G
Sbjct: 184 GXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTG 243
Query: 353 ----PFWARTESGIFRAVLKADPSFDEAPWPSL----SPEAIDFVKRLLNKDYRKRLTAA 404
F R +S + +K P ++ + S+ SP A++ ++++L D +R+TA
Sbjct: 244 TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG 303
Query: 405 QALSHPWLANSHDVK 419
+AL+HP+ + HD +
Sbjct: 304 EALAHPYFESLHDTE 318
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +D GL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDAGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +D GL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDGGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K L+ VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +D GL
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDRGL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 44/247 (17%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR-----GGKYSEED 254
REV +L+ L H N+V +D + ++ +V E LD+ L + G + +
Sbjct: 49 REVSLLKDLK-HANIVTLHDIIHTEKSLTLVFEY------LDKDLKQYLDDCGNIINMHN 101
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVK-PDERLN 313
K+ + Q+L +A+CH Q V+HRDLKP+N L E LK DFGL+ P + +
Sbjct: 102 VKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPTKTYD 158
Query: 314 DIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADP 371
+ V + +Y P++L S Y T+ DMW +G I Y + G F T + +
Sbjct: 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILG 218
Query: 372 SFDEAPWPS--------------------------LSPEAIDFVKRLLNKDYRKRLTAAQ 405
+ E WP L + D + +LL + R R++A
Sbjct: 219 TPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAED 278
Query: 406 ALSHPWL 412
A+ HP+
Sbjct: 279 AMKHPFF 285
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 75/324 (23%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
VG G +G C+A K G VAVK + + I +H +
Sbjct: 30 VGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSI---IHAKR---------------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDR 242
RE+++L+ + H+N++ D + E+ +++Y+V L G L+
Sbjct: 68 ---------TYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNN 115
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
I+ + K +++ + ++ QIL + + H ++HRDLKP N + E+ LK +DF L
Sbjct: 116 IV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFYL 171
Query: 303 SDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+ + D+ + V + +Y APE++ Y D+WS+G I LL G F
Sbjct: 172 ARHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 361 GIFRAVLK--ADP------------------SFDEAP-------WPSLSPEAIDFVKRLL 393
+ +L+ P S + P + +P A+D ++++L
Sbjct: 230 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 394 NKDYRKRLTAAQALSHPWLANSHD 417
D KR+TAAQAL+H + A HD
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
E + + A +VQ + A++DD +Y+VME GG+L++ L E+ AK
Sbjct: 124 EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN--LMSNYDVPEKWAKFYTA 181
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE----RLNDIV 316
+++ + H G++HRD+KP+N L +++ LK DFG +K DE + V
Sbjct: 182 EVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTC--MKMDETGMVHCDTAV 236
Query: 317 GSAYYVAPEVLHRS-----YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
G+ Y++PEVL YG E D WS+GV + +L G PF+A + G + ++
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
E + + A +VQ + A++DD +Y+VME GG+L++ L E+ A+
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN--LMSNYDVPEKWARFYTA 180
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE--RLNDIVGS 318
+++ + H G +HRD+KP+N L +++ LK DFG + + R + VG+
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 319 AYYVAPEVLHRS-----YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
Y++PEVL YG E D WS+GV Y +L G PF+A + G + ++
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
E + + A +VQ + A++DD +Y+VME GG+L++ L E+ A+
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN--LMSNYDVPEKWARFYTA 175
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE--RLNDIVGS 318
+++ + H G +HRD+KP+N L +++ LK DFG + + R + VG+
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 319 AYYVAPEVLHRS-----YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
Y++PEVL YG E D WS+GV Y +L G PF+A + G + ++
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 73 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 132
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 133 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 189
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 243
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 244 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 285
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 93 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 152
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 153 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 209
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 263
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 264 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 305
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 74 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 133
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 190
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 244
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 245 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 286
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 101 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 160
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 217
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 271
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 272 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 313
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 101 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 160
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 217
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 271
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 272 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 313
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 86 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 145
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 202
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 256
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 257 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 298
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 101 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 160
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 217
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 271
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 272 Q----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 313
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 106 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 165
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 166 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 222
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 223 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 276
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 277 Q----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 318
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 74 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 133
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 190
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 244
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 245 Q----RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWM---QDVLLPQE 286
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 113/223 (50%), Gaps = 12/223 (5%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQG 273
+ ++Y +Y D ++I+ME GG LD L G E ++ +IL + + H +
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLNDIVGSAYYVAPEVLHRS-Y 331
+HRD+K N L + E+ +K DFG++ + + + N VG+ +++APEV+ +S Y
Sbjct: 125 KIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKR 391
++AD+WS+G+ A L G P + + K +P E + S +FV+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 238
Query: 392 LLNKDYRKRLTAAQALSHPW-LANSHDVKIPSDMI-VYKLIKA 432
LNK+ R TA + L H + L N+ +++I YK KA
Sbjct: 239 CLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKA 281
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 113/223 (50%), Gaps = 12/223 (5%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQG 273
+ ++Y +Y D ++I+ME GG LD L G E ++ +IL + + H +
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLNDIVGSAYYVAPEVLHRS-Y 331
+HRD+K N L + E+ +K DFG++ + + + N VG+ +++APEV+ +S Y
Sbjct: 140 KIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKR 391
++AD+WS+G+ A L G P + + K +P E + S +FV+
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKPLKEFVEA 253
Query: 392 LLNKDYRKRLTAAQALSHPW-LANSHDVKIPSDMI-VYKLIKA 432
LNK+ R TA + L H + L N+ +++I YK KA
Sbjct: 254 CLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKA 296
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 73 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 132
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 133 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 189
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 243
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 244 Q----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 285
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
E + + A +VQ + A++DD +Y+VME GG+L++ L E+ A+
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN--LMSNYDVPEKWARFYTA 180
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE--RLNDIVGS 318
+++ + H G +HRD+KP+N L +++ LK DFG + + R + VG+
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 319 AYYVAPEVLHRS-----YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVL 367
Y++PEVL YG E D WS+GV Y +L G PF+A + G + ++
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 74 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 133
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 190
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 244
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 245 Q----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 286
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 58 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELAR 117
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 174
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 228
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 229 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 270
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 59 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 118
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 175
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 229
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 230 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 271
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 59 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 118
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 175
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 229
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 230 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 271
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 52/273 (19%)
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYD-------AYEDD-------DNIYIVME 232
+ +T +++ RE+KI+R L H N+V+ ++ DD +++YIV E
Sbjct: 44 IVLTDPQSVKHALREIKIIRRLD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQE 102
Query: 233 LCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEEN 292
+ L +L +G EE A++ M Q+L + + H V+HRDLKP N + E+
Sbjct: 103 YMETD--LANVLEQG-PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--ED 157
Query: 293 SSLKAIDFGLSDYVKP----DERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYI 346
LK DFGL+ + P L++ + + +Y +P +L +Y DMW+ G I
Sbjct: 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE 217
Query: 347 LLCGSRPFWARTESGIFRAVLKADPSFDEAP--------------------------WPS 380
+L G F E + +L++ P E P
Sbjct: 218 MLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPG 277
Query: 381 LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+S EA+DF++++L RLTA +ALSHP+++
Sbjct: 278 ISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 113/223 (50%), Gaps = 12/223 (5%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQG 273
+ ++Y +Y D ++I+ME GG LD L G E ++ +IL + + H +
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLNDIVGSAYYVAPEVLHRS-Y 331
+HRD+K N L + E+ +K DFG++ + + + N VG+ +++APEV+ +S Y
Sbjct: 125 KIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKR 391
++AD+WS+G+ A L G P + + K +P E + S +FV+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKPLKEFVEA 238
Query: 392 LLNKDYRKRLTAAQALSHPW-LANSHDVKIPSDMI-VYKLIKA 432
LNK+ R TA + L H + L N+ +++I YK KA
Sbjct: 239 CLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKA 281
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 81 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 140
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 141 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 197
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 198 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 251
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 252 Q----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 293
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 10/201 (4%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQG 273
+ ++Y +Y D ++I+ME GG LD L G E ++ +IL + + H +
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLNDIVGSAYYVAPEVLHRS-Y 331
+HRD+K N L + E+ +K DFG++ + + + N VG+ +++APEV+ +S Y
Sbjct: 145 KIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKR 391
++AD+WS+G+ A L G P + + K +P E + S +FV+
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 258
Query: 392 LLNKDYRKRLTAAQALSHPWL 412
LNK+ R TA + L H ++
Sbjct: 259 CLNKEPSFRPTAKELLKHKFI 279
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 201 EVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
Q+L V CH GV+HRD+K EN L LK IDFG +K D D G+
Sbjct: 117 WQVLEAVRHCHNXGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFDGTR 173
Query: 320 YYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAP 377
Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 225
Query: 378 WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+S E ++ L R T + +HPW+ DV +P +
Sbjct: 226 --RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 266
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 58 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 117
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 174
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 228
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 229 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 270
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 41/299 (13%)
Query: 118 QFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQ 177
++ Y +G G FG+ +A K+ K ++V VK I K + + PK
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKE---KNKEVVVKFIKKEKVLEDCWIEDPK----- 72
Query: 178 FTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG 237
+ V E+ IL + H N+++ D +E+ +VME G
Sbjct: 73 -----------------LGKVTLEIAILSRVE-HANIIKVLDIFENQGFFQLVMEKHGSG 114
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
L + R + E A + Q++S V + + ++HRD+K EN + E+ ++K
Sbjct: 115 LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKL 171
Query: 298 IDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFW 355
IDFG + Y++ + G+ Y APEVL + G E +MWS+GV Y L+ PF
Sbjct: 172 IDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF- 230
Query: 356 ARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
E + A+ P +S E + V LL +R T + ++ PW+
Sbjct: 231 CELEETVEAAI---------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 59 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 118
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 175
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR 229
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 230 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 271
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 201 EVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 119
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
Q+L V CH GV+HRD+K EN L LK IDFG +K D D G+
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFDGTR 176
Query: 320 YYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAP 377
Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F +
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 228
Query: 378 WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+S E ++ L R T + +HPW+ DV +P +
Sbjct: 229 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 269
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 201 EVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
Q+L V CH GV+HRD+K EN L LK IDFG +K D D G+
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFDGTR 173
Query: 320 YYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAP 377
Y PE + HR +G A +WS+G++ Y ++CG PF E +++ F +
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 225
Query: 378 WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+S E ++ L R T + +HPW+ DV +P +
Sbjct: 226 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 266
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 86 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 145
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 202
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E ++ F
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFR 256
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 257 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 298
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 87 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 146
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 203
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E ++ F
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFR 257
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 258 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 299
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 86 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 145
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 202
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E ++ F
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFR 256
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 257 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 298
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 87 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 146
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 203
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E ++ F
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFR 257
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 258 Q----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 299
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 87 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 146
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 203
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E ++ F
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFR 257
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 258 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 299
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 137/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 51 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 85
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++Y+V L G +L
Sbjct: 86 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYK-- 134
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + + LK DFGL+
Sbjct: 135 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 191
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 192 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 250
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 251 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 310
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 311 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 341
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 87 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 146
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 203
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E ++ F
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFR 257
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 258 Q----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 299
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 65
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 66 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 115
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + + LK DFGL+
Sbjct: 116 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 171
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 172 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 230
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 231 KHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 290
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 291 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 321
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 65
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 66 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 115
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + + LK DFGL+
Sbjct: 116 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 171
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 172 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 230
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 231 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 290
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 291 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 321
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQG 273
+ ++Y +Y ++I+ME GG LD L R G + E ++ +IL + + H +
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALD--LLRAGPFDEFQIATMLKEILKGLDYLHSEK 140
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLNDIVGSAYYVAPEVLHRS-Y 331
+HRD+K N L + E +K DFG++ + + + N VG+ +++APEV+ +S Y
Sbjct: 141 KIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----D 387
++AD+WS+G+ A L G P + + K +P P+L + +
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------PTLVGDFTKSFKE 250
Query: 388 FVKRLLNKDYRKRLTAAQALSHPWLA-NSHDVKIPSDMI 425
F+ LNKD R TA + L H ++ NS +++I
Sbjct: 251 FIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTELI 289
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 86 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 145
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 202
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E ++ F
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFR 256
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 257 Q----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 298
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 65
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 66 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 115
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + + LK DFGL+
Sbjct: 116 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLA 171
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 172 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 230
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 231 KHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 290
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 291 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 321
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 12/191 (6%)
Query: 212 KNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHF 271
K + + A++DD+N+Y+VM+ GG+LL + + EE A+ + +++ + H
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 272 QGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLND--IVGSAYYVAPEVLHR 329
VHRD+KP+N L + N ++ DFG + D + VG+ Y++PE+L
Sbjct: 194 LHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 330 ------SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD-EAPWPSLS 382
YG E D WS+GV Y +L G PF+A + + ++ F +S
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVS 310
Query: 383 PEAIDFVKRLL 393
A D ++RL+
Sbjct: 311 ENAKDLIRRLI 321
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 65
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 66 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 115
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 116 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 171
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 172 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 230
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 231 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 290
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 291 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 321
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 118/243 (48%), Gaps = 40/243 (16%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI--- 257
E+K+L H N++++Y + D +YI +ELC L D + S+ S+E+ K+
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKN--VSDENLKLQKE 132
Query: 258 -----VMVQILSVVAFCHFQGVVHRDLKPENFL------FTSKE----ENSSLKAIDFGL 302
++ QI S VA H ++HRDLKP+N L FT+ + EN + DFGL
Sbjct: 133 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 303 SDYVKPDE-----RLNDIVGSAYYVAPEVLH----RSYGTEADMWSIG-VIAYILLCGSR 352
+ + LN+ G++ + APE+L R D++S+G V YIL G
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 353 PFWAR--TESGIFRAVLKADPSFDEAPW---PSLSPEAIDFVKRLLNKDYRKRLTAAQAL 407
PF + ES I R + S DE SL EA D + ++++ D KR TA + L
Sbjct: 253 PFGDKYSRESNIIRGIF----SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
Query: 408 SHP 410
HP
Sbjct: 309 RHP 311
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 118/243 (48%), Gaps = 40/243 (16%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI--- 257
E+K+L H N++++Y + D +YI +ELC L D + S+ S+E+ K+
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKN--VSDENLKLQKE 132
Query: 258 -----VMVQILSVVAFCHFQGVVHRDLKPENFL------FTSKE----ENSSLKAIDFGL 302
++ QI S VA H ++HRDLKP+N L FT+ + EN + DFGL
Sbjct: 133 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 303 SDYVKPDE-----RLNDIVGSAYYVAPEVLH----RSYGTEADMWSIG-VIAYILLCGSR 352
+ + LN+ G++ + APE+L R D++S+G V YIL G
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 353 PFWAR--TESGIFRAVLKADPSFDEAPW---PSLSPEAIDFVKRLLNKDYRKRLTAAQAL 407
PF + ES I R + S DE SL EA D + ++++ D KR TA + L
Sbjct: 253 PFGDKYSRESNIIRGIF----SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
Query: 408 SHP 410
HP
Sbjct: 309 RHP 311
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---VAIKKISPF--------------EHQ-----TYC--- 69
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 70 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 119
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + + LK DFGL+
Sbjct: 120 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 175
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 234
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 294
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 295 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 325
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 29 IGEGAYGMVCSAYDNLNKVR---VAIKKISPF--------------EHQ-----TYC--- 63
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 64 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 113
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 114 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 169
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 170 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 228
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 229 KHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 288
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 289 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 319
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 68 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 117
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 118 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 173
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 174 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 232
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 233 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 292
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 293 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 323
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 51 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 85
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 86 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 135
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 136 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 191
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 192 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 250
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 251 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 310
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 311 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 341
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 36 IGEGAYGMVCSAYDNLNKVR---VAIKKISPF--------------EHQ-----TYC--- 70
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 71 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 120
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 121 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 176
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 177 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 235
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 236 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 295
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 296 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 326
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 37 IGEGAYGMVCSAYDNLNKVR---VAIKKISPF--------------EHQ-----TYC--- 71
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 72 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 121
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 122 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 177
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 178 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 236
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 237 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 296
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 297 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 327
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 28 IGEGAYGMVCSAYDNLNKVR---VAIKKISPF--------------EHQ-----TYC--- 62
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 63 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 112
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 113 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 168
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 169 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 227
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 228 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 287
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 288 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 318
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---VAIKKISPF--------------EHQ-----TYC--- 69
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 70 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 119
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 120 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 175
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 234
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 294
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 295 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 325
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 29 IGEGAYGMVCSAYDNLNKVR---VAIKKISPF--------------EHQ-----TYC--- 63
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 64 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 113
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 114 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 169
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 170 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 228
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 229 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 288
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 289 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 319
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 138/307 (44%), Gaps = 55/307 (17%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
+E+ + +GRG F K K+ GQ A+K++ K + +V C + E
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQ---TGQVYAMKIMNKWDMLKRGEVSCFREERD------ 113
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDR 242
+ + RR + Q + A++D++ +Y+VME GG+LL
Sbjct: 114 ----------VLVNGDRRWI------------TQLHFAFQDENYLYLVMEYYVGGDLLTL 151
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
+ G + E A+ + +I+ + H G VHRD+KP+N L + ++ DFG
Sbjct: 152 LSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGS 208
Query: 303 SDYVKPDERLNDI--VGSAYYVAPEVLH--------RSYGTEADMWSIGVIAYILLCGSR 352
++ D + + VG+ Y++PE+L SYG E D W++GV AY + G
Sbjct: 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQT 268
Query: 353 PFWARTESGIFRAVLK-----ADPSFDEAPWPSLSPEAIDFVKRLLNKDYRK--RLTAAQ 405
PF+A + + + ++ + P DE + EA DF++RLL + R A
Sbjct: 269 PFYADSTAETYGKIVHYKEHLSLPLVDEG----VPEEARDFIQRLLCPPETRLGRGGAGD 324
Query: 406 ALSHPWL 412
+HP+
Sbjct: 325 FRTHPFF 331
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 139/329 (42%), Gaps = 67/329 (20%)
Query: 116 SKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHEN 175
S +F+ +++ E++G G +G A+ K L G+ VA+K I
Sbjct: 5 SPEFMENFQKVEKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------- 44
Query: 176 HQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCK 235
LD +TAI RE+ +L+ L H N+V+ D ++ +Y+V E
Sbjct: 45 -----LDTETEGVPSTAI------REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLH 92
Query: 236 GG--ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENS 293
+ +D G K + Q+L +AFCH V+HRDLKP+N L ++
Sbjct: 93 QDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---G 147
Query: 294 SLKAIDFGLSD-YVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCG 350
++K DFGL+ + P V + +Y APE+L + Y T D+WS+G I ++
Sbjct: 148 AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTR 207
Query: 351 SRPFWARTESGIFRAVLKADPSFDEAPWPS-------------------------LSPEA 385
F +E + + + DE WP L +
Sbjct: 208 RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 267
Query: 386 IDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+ ++L+ D KR++A AL+HP+ +
Sbjct: 268 RSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 198 VRREVKILRALT-GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
V EV +L+ ++ G +++ D +E D+ +++E + + L ++ G EE A+
Sbjct: 54 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 113
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
Q+L V CH GV+HRD+K EN L LK IDFG +K D D
Sbjct: 114 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLK-DTVYTDFD 170
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
G+ Y PE + HR +G A +WS+G++ Y ++CG PF E ++ F
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFR 224
Query: 375 EAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
+ +S E ++ L R T + +HPW+ DV +P +
Sbjct: 225 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM---QDVLLPQE 266
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 39 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 73
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 74 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 123
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 124 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 179
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 180 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 238
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 239 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 298
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 299 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 329
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR---VAIKKISPF--------------EHQ-----TYC--- 65
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 66 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 115
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 116 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 171
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 172 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 230
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 231 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 290
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 291 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 321
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---VAIKKISPF--------------EHQ-----TYC--- 69
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 70 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 119
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 120 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 175
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 176 RVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 234
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 294
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 295 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 325
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 36 IGEGAYGMVCSAYDNLNKVR---VAIKKISPF--------------EHQ-----TYC--- 70
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 71 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 120
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 121 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 176
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 177 RVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 235
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 236 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 295
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 296 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 326
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA+K I HQ YC
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---VAIKKISPF--------------EHQ-----TYC--- 69
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 70 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 119
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 120 L-KCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 175
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 234
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 294
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 295 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 325
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 139/329 (42%), Gaps = 67/329 (20%)
Query: 116 SKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHEN 175
S +F+ +++ E++G G +G A+ K L G+ VA+K I
Sbjct: 5 SPEFMENFQKVEKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------- 44
Query: 176 HQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCK 235
LD +TAI RE+ +L+ L H N+V+ D ++ +Y+V E
Sbjct: 45 -----LDTETEGVPSTAI------REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLH 92
Query: 236 GG--ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENS 293
+ +D G K + Q+L +AFCH V+HRDLKP+N L ++
Sbjct: 93 QDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---G 147
Query: 294 SLKAIDFGLSD-YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCG 350
++K DFGL+ + P V + +Y APE+L + Y T D+WS+G I ++
Sbjct: 148 AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 207
Query: 351 SRPFWARTESGIFRAVLKADPSFDEAPWPS-------------------------LSPEA 385
F +E + + + DE WP L +
Sbjct: 208 RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 267
Query: 386 IDFVKRLLNKDYRKRLTAAQALSHPWLAN 414
+ ++L+ D KR++A AL+HP+ +
Sbjct: 268 RSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 55/305 (18%)
Query: 108 GLDKNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQ 167
L + G++ +A++ + +++GRG F A L G VA+K +
Sbjct: 21 ALRPDMGYNT--LANFRIEKKIGRGQFSEVYRAAC---LLDGVPVALKKV---------- 65
Query: 168 VHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNI 227
F ++D A A D +E+ +L+ L H N++++Y ++ +D+ +
Sbjct: 66 --------QIFDLMD---------AKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNEL 107
Query: 228 YIVMELCKGGELLDRILSRGGKYSEEDAKIV--------MVQILSVVAFCHFQGVVHRDL 279
IV+EL G+ LSR K+ ++ +++ VQ+ S + H + V+HRD+
Sbjct: 108 NIVLELADAGD-----LSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDI 162
Query: 280 KPENFLFTSKEENSSLKAIDFGLSDYVKPDER-LNDIVGSAYYVAPEVLHRS-YGTEADM 337
KP N T+ +K D GL + + +VG+ YY++PE +H + Y ++D+
Sbjct: 163 KPANVFITA---TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDI 219
Query: 338 WSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS--LSPEAIDFVKRLLNK 395
WS+G + Y + PF+ + ++ K D P PS S E V +N
Sbjct: 220 WSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINP 277
Query: 396 DYRKR 400
D KR
Sbjct: 278 DPEKR 282
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G +G CSA ++ VA++ I HQ YC
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---VAIRKISPF--------------EHQ-----TYC--- 69
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRI 243
+ RE+KIL H+N++ D E ++YIV +L + L ++
Sbjct: 70 -------QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKL 119
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
L + S + + QIL + + H V+HRDLKP N L + LK DFGL+
Sbjct: 120 L-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLA 175
Query: 304 DYVKPDER----LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWAR 357
PD L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPG 234
Query: 358 TES--------GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFV 389
GI R L + P ++ PW L P +A+D +
Sbjct: 235 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 294
Query: 390 KRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSD 423
++L + KR+ QAL+HP+L +D PSD
Sbjct: 295 DKMLTFNPHKRIEVEQALAHPYLEQYYD---PSD 325
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 119/247 (48%), Gaps = 44/247 (17%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI--- 257
E+K+L H N++++Y + D +YI +ELC L D + S+ S+E+ K+
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKN--VSDENLKLQKE 114
Query: 258 -----VMVQILSVVAFCHFQGVVHRDLKPENFL------FTSKE----ENSSLKAIDFGL 302
++ QI S VA H ++HRDLKP+N L FT+ + EN + DFGL
Sbjct: 115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 303 SDYVKPDE-----RLNDIVGSAYYVAPEVLHRSYGTEA--------DMWSIG-VIAYILL 348
+ + LN+ G++ + APE+L S + D++S+G V YIL
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 349 CGSRPFWAR--TESGIFRAVLKADPSFDEAPW---PSLSPEAIDFVKRLLNKDYRKRLTA 403
G PF + ES I R + S DE SL EA D + ++++ D KR TA
Sbjct: 235 KGKHPFGDKYSRESNIIRGIF----SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 404 AQALSHP 410
+ L HP
Sbjct: 291 MKVLRHP 297
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 119/247 (48%), Gaps = 44/247 (17%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI--- 257
E+K+L H N++++Y + D +YI +ELC L D + S+ S+E+ K+
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKN--VSDENLKLQKE 114
Query: 258 -----VMVQILSVVAFCHFQGVVHRDLKPENFL------FTSKE----ENSSLKAIDFGL 302
++ QI S VA H ++HRDLKP+N L FT+ + EN + DFGL
Sbjct: 115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 303 SDYVKPDE-----RLNDIVGSAYYVAPEVLHRSYGTEA--------DMWSIG-VIAYILL 348
+ + LN+ G++ + APE+L S + D++S+G V YIL
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 349 CGSRPFWAR--TESGIFRAVLKADPSFDEAPW---PSLSPEAIDFVKRLLNKDYRKRLTA 403
G PF + ES I R + S DE SL EA D + ++++ D KR TA
Sbjct: 235 KGKHPFGDKYSRESNIIRGIF----SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 404 AQALSHP 410
+ L HP
Sbjct: 291 MKVLRHP 297
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 50/263 (19%)
Query: 200 REVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRILSRGGKYSEED 254
RE+KIL H+N++ D E ++YIV +L + L ++L + S +
Sbjct: 74 REIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL-KTQHLSNDH 129
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER--- 311
+ QIL + + H V+HRDLKP N L + + LK DFGL+ PD
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTG 186
Query: 312 -LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
L + V + +Y APE++ S Y D+WS+G I +L +RP +
Sbjct: 187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 245
Query: 361 GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFVKRLLNKDYRKR 400
GI R L + P ++ PW L P +A+D + ++L + KR
Sbjct: 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 401 LTAAQALSHPWLANSHDVKIPSD 423
+ QAL+HP+L +D PSD
Sbjct: 306 IEVEQALAHPYLEQYYD---PSD 325
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 33/260 (12%)
Query: 178 FTILDEYCCLFMTTAIAIEDV--------RREVKILRALTGHKN-LVQFYDAYEDDDNIY 228
F +L+E ++ + +E+ R E+ L L H + +++ YD D IY
Sbjct: 26 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85
Query: 229 IVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
+VME C G L+ L + + K +L V H G+VH DLKP NFL
Sbjct: 86 MVME-C-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV- 142
Query: 289 KEENSSLKAIDFGLSDYVKPDER---LNDIVGSAYYVAPEVLH-----RSYG-------T 333
+ LK IDFG+++ ++PD + VG+ Y+ PE + R G
Sbjct: 143 ---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 199
Query: 334 EADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRL 392
++D+WS+G I Y + G PF + + I + DP+ E +P + + + D +K
Sbjct: 200 KSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCC 257
Query: 393 LNKDYRKRLTAAQALSHPWL 412
L +D ++R++ + L+HP++
Sbjct: 258 LKRDPKQRISIPELLAHPYV 277
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 27/224 (12%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG--KYSEEDAKIVMVQILSVVAF 268
HKN+VQ+ ++ ++ I I ME GG L + S+ G K +E+ QIL + +
Sbjct: 78 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKY 137
Query: 269 CHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI-------VGSAYY 321
H +VHRD+K +N L + + LK DFG S +RL I G+ Y
Sbjct: 138 LHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTS------KRLAGINPCTETFTGTLQY 189
Query: 322 VAPEVLH---RSYGTEADMWSIGVIAYILLCGSRPFW--ARTESGIFR-AVLKADPSFDE 375
+APE++ R YG AD+WS+G + G PF+ ++ +F+ + K P E
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE 249
Query: 376 APWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVK 419
S+S EA F+ + D KR A L +L S K
Sbjct: 250 ----SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKK 289
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 42/250 (16%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
RE++I+R + H N+V FY + D +++ + L E + R K +
Sbjct: 81 RELQIMR-IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMP 139
Query: 256 ----KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+L +A+ H G+ HRD+KP+N L + LK IDFG + + E
Sbjct: 140 MLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP--SGVLKLIDFGSAKILIAGEP 197
Query: 312 LNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAV--- 366
+ S YY APE++ +Y T D+WS G + L+ G F ESGI + V
Sbjct: 198 NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG--ESGIDQLVEII 255
Query: 367 -----------LKADPSFDEAPWPSL-------------SPEAIDFVKRLLNKDYRKRLT 402
+P++ E +P + P+AID + RLL RLT
Sbjct: 256 KVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT 315
Query: 403 AAQALSHPWL 412
A +AL HP+
Sbjct: 316 AIEALCHPFF 325
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 10/225 (4%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H+N+V D E+DD Y+VME +G L + I S G S + A QIL + H
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH 128
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE--RLNDIVGSAYYVAPEVLH 328
+VHRD+KP+N L S N +LK DFG++ + + N ++G+ Y +PE
Sbjct: 129 DMRIVHRDIKPQNILIDS---NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK 185
Query: 329 RSYGTE-ADMWSIGVIAYILLCGSRPFWARTESGI-FRAVLKADPSFDEAPWPSLSPEAI 386
E D++SIG++ Y +L G PF T I + + + P+ +
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLS 245
Query: 387 DFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDMIVYKLIK 431
+ + R KD R Q + + H+ + D VY+L K
Sbjct: 246 NVILRATEKDKANRYKTIQEMKDDLSSVLHENRANED--VYELDK 288
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 33/260 (12%)
Query: 178 FTILDEYCCLFMTTAIAIEDV--------RREVKILRALTGHKN-LVQFYDAYEDDDNIY 228
F +L+E ++ + +E+ R E+ L L H + +++ YD D IY
Sbjct: 73 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132
Query: 229 IVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
+VME C G L+ L + + K +L V H G+VH DLKP NFL
Sbjct: 133 MVME-C-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV- 189
Query: 289 KEENSSLKAIDFGLSDYVKPDERL---NDIVGSAYYVAPEVLH-----RSYG-------T 333
+ LK IDFG+++ ++PD + VG+ Y+ PE + R G
Sbjct: 190 ---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 246
Query: 334 EADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRL 392
++D+WS+G I Y + G PF + + I + DP+ E +P + + + D +K
Sbjct: 247 KSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCC 304
Query: 393 LNKDYRKRLTAAQALSHPWL 412
L +D ++R++ + L+HP++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 33/260 (12%)
Query: 178 FTILDEYCCLFMTTAIAIEDV--------RREVKILRALTGHKN-LVQFYDAYEDDDNIY 228
F +L+E ++ + +E+ R E+ L L H + +++ YD D IY
Sbjct: 45 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104
Query: 229 IVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
+VME C G L+ L + + K +L V H G+VH DLKP NFL
Sbjct: 105 MVME-C-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV- 161
Query: 289 KEENSSLKAIDFGLSDYVKPDERL---NDIVGSAYYVAPEVLH-----RSYG-------T 333
+ LK IDFG+++ ++PD + VG+ Y+ PE + R G
Sbjct: 162 ---DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 218
Query: 334 EADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRL 392
++D+WS+G I Y + G PF + + I + DP+ E +P + + + D +K
Sbjct: 219 KSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCC 276
Query: 393 LNKDYRKRLTAAQALSHPWL 412
L +D ++R++ + L+HP++
Sbjct: 277 LKRDPKQRISIPELLAHPYV 296
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 18/224 (8%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ RE+++L +V FY A+ D I I ME GG L D++L + G+ E+
Sbjct: 54 IIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGK 111
Query: 258 VMVQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
V + ++ + + + ++HRD+KP N L S+ E +K DFG+S + DE N+ V
Sbjct: 112 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DEMANEFV 167
Query: 317 GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDE 375
G+ Y++PE L + Y ++D+WS+G+ + G P R IF + D +E
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELL---DYIVNE 221
Query: 376 AP--WPS--LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
P PS S E DFV + L K+ +R Q + H ++ S
Sbjct: 222 PPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 265
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 33/260 (12%)
Query: 178 FTILDEYCCLFMTTAIAIEDV--------RREVKILRALTGHKN-LVQFYDAYEDDDNIY 228
F +L+E ++ + +E+ R E+ L L H + +++ YD D IY
Sbjct: 29 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 88
Query: 229 IVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
+VME C G L+ L + + K +L V H G+VH DLKP NFL
Sbjct: 89 MVME-C-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV- 145
Query: 289 KEENSSLKAIDFGLSDYVKPDERL---NDIVGSAYYVAPEVLH-----RSYG-------T 333
+ LK IDFG+++ ++PD + VG+ Y+ PE + R G
Sbjct: 146 ---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 202
Query: 334 EADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRL 392
++D+WS+G I Y + G PF + + I + DP+ E +P + + + D +K
Sbjct: 203 KSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCC 260
Query: 393 LNKDYRKRLTAAQALSHPWL 412
L +D ++R++ + L+HP++
Sbjct: 261 LKRDPKQRISIPELLAHPYV 280
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 33/260 (12%)
Query: 178 FTILDEYCCLFMTTAIAIEDV--------RREVKILRALTGHKN-LVQFYDAYEDDDNIY 228
F +L+E ++ + +E+ R E+ L L H + +++ YD D IY
Sbjct: 73 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132
Query: 229 IVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
+VME C G L+ L + + K +L V H G+VH DLKP NFL
Sbjct: 133 MVME-C-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV- 189
Query: 289 KEENSSLKAIDFGLSDYVKPDERL---NDIVGSAYYVAPEVLH-----RSYG-------T 333
+ LK IDFG+++ ++PD + VG+ Y+ PE + R G
Sbjct: 190 ---DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISP 246
Query: 334 EADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRL 392
++D+WS+G I Y + G PF + + I + DP+ E +P + + + D +K
Sbjct: 247 KSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCC 304
Query: 393 LNKDYRKRLTAAQALSHPWL 412
L +D ++R++ + L+HP++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG--KYSEEDAKIVMVQILSVVAF 268
HKN+VQ+ ++ ++ I I ME GG L + S+ G K +E+ QIL + +
Sbjct: 64 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKY 123
Query: 269 CHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLND-IVGSAYYVAPEVL 327
H +VHRD+K +N L + + LK DFG S + + G+ Y+APE++
Sbjct: 124 LHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII 181
Query: 328 H---RSYGTEADMWSIGVIAYILLCGSRPFW--ARTESGIFR-AVLKADPSFDEAPWPSL 381
R YG AD+WS+G + G PF+ ++ +F+ + K P E S+
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE----SM 237
Query: 382 SPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
S EA F+ + D KR A L +L
Sbjct: 238 SAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 33/260 (12%)
Query: 178 FTILDEYCCLFMTTAIAIEDV--------RREVKILRALTGHKN-LVQFYDAYEDDDNIY 228
F +L+E ++ + +E+ R E+ L L H + +++ YD D IY
Sbjct: 73 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132
Query: 229 IVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
+VME G L+ L + + K +L V H G+VH DLKP NFL
Sbjct: 133 MVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV- 189
Query: 289 KEENSSLKAIDFGLSDYVKPDERL---NDIVGSAYYVAPEVLH-----RSYG-------T 333
+ LK IDFG+++ ++PD + VG+ Y+ PE + R G
Sbjct: 190 ---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 246
Query: 334 EADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRL 392
++D+WS+G I Y + G PF + + I + DP+ E +P + + + D +K
Sbjct: 247 KSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCC 304
Query: 393 LNKDYRKRLTAAQALSHPWL 412
L +D ++R++ + L+HP++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 33/260 (12%)
Query: 178 FTILDEYCCLFMTTAIAIEDV--------RREVKILRALTGHKN-LVQFYDAYEDDDNIY 228
F +L+E ++ + +E+ R E+ L L H + +++ YD D IY
Sbjct: 45 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104
Query: 229 IVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
+VME C G L+ L + + K +L V H G+VH DLKP NFL
Sbjct: 105 MVME-C-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV- 161
Query: 289 KEENSSLKAIDFGLSDYVKPDERL---NDIVGSAYYVAPEVLH-----RSYG-------T 333
+ LK IDFG+++ ++PD + VG+ Y+ PE + R G
Sbjct: 162 ---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 218
Query: 334 EADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRL 392
++D+WS+G I Y + G PF + + I + DP+ E +P + + + D +K
Sbjct: 219 KSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCC 276
Query: 393 LNKDYRKRLTAAQALSHPWL 412
L +D ++R++ + L+HP++
Sbjct: 277 LKRDPKQRISIPELLAHPYV 296
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 33/260 (12%)
Query: 178 FTILDEYCCLFMTTAIAIEDV--------RREVKILRALTGHKN-LVQFYDAYEDDDNIY 228
F +L+E ++ + +E+ R E+ L L H + +++ YD D IY
Sbjct: 25 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 84
Query: 229 IVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
+VME C G L+ L + + K +L V H G+VH DLKP NFL
Sbjct: 85 MVME-C-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV- 141
Query: 289 KEENSSLKAIDFGLSDYVKPDER---LNDIVGSAYYVAPEVLH-----RSYG-------T 333
+ LK IDFG+++ ++PD + VG+ Y+ PE + R G
Sbjct: 142 ---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 198
Query: 334 EADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRL 392
++D+WS+G I Y + G PF + + I + DP+ E +P + + + D +K
Sbjct: 199 KSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCC 256
Query: 393 LNKDYRKRLTAAQALSHPWL 412
L +D ++R++ + L+HP++
Sbjct: 257 LKRDPKQRISIPELLAHPYV 276
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 50/263 (19%)
Query: 200 REVKILRALTGHKNLVQFYD-----AYEDDDNIYIVMELCKGGELLDRILSRGGKYSEED 254
RE++IL H+N++ D E ++YIV +L + L ++L + + S +
Sbjct: 90 REIQILLRFR-HENVIGIRDILRASTLEAMRDVYIVQDLMETD--LYKLL-KSQQLSNDH 145
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER--- 311
+ QIL + + H V+HRDLKP N L + LK DFGL+ P+
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLINT---TCDLKICDFGLARIADPEHDHTG 202
Query: 312 -LNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES-------- 360
L + V + +Y APE++ + Y D+WS+G I +L +RP +
Sbjct: 203 FLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHIL 261
Query: 361 GIF----------------RAVLKADPSFDEAPWPSLSP----EAIDFVKRLLNKDYRKR 400
GI R L++ PS + W L P +A+D + R+L + KR
Sbjct: 262 GILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKR 321
Query: 401 LTAAQALSHPWLANSHDVKIPSD 423
+T +AL+HP+L +D P+D
Sbjct: 322 ITVEEALAHPYLEQYYD---PTD 341
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 18/192 (9%)
Query: 220 AYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDL 279
A++D++++Y+VM+ GG+LL + K E+ A+ + +++ + H VHRD+
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDI 217
Query: 280 KPENFLFTSKEENSSLKAIDFGLSDYVKPDERLND--IVGSAYYVAPEVLHR------SY 331
KP+N L + N ++ DFG + D + VG+ Y++PE+L Y
Sbjct: 218 KPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKY 274
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS----LSPEAID 387
G E D WS+GV Y +L G PF+A + + ++ + F +PS +S EA D
Sbjct: 275 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVTDVSEEAKD 331
Query: 388 FVKRLLNKDYRK 399
++RL+ R+
Sbjct: 332 LIQRLICSRERR 343
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 18/192 (9%)
Query: 220 AYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDL 279
A++D++++Y+VM+ GG+LL + K E+ A+ + +++ + H VHRD+
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDI 201
Query: 280 KPENFLFTSKEENSSLKAIDFGLSDYVKPDERLND--IVGSAYYVAPEVLHR------SY 331
KP+N L + N ++ DFG + D + VG+ Y++PE+L Y
Sbjct: 202 KPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKY 258
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPS----LSPEAID 387
G E D WS+GV Y +L G PF+A + + ++ + F +PS +S EA D
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVTDVSEEAKD 315
Query: 388 FVKRLLNKDYRK 399
++RL+ R+
Sbjct: 316 LIQRLICSRERR 327
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 141/326 (43%), Gaps = 60/326 (18%)
Query: 116 SKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVI---PKMIGVIFLQVHCPK 172
S ++ + +E +G+G FG A+ +L + A+K I + + I +V
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKAR---NALDSRYYAIKKIRHTEEKLSTILSEVMLLA 57
Query: 173 HENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVME 232
NHQ+ V+ A +N V+ A + ++I ME
Sbjct: 58 SLNHQYV----------------------VRYYAAWLERRNFVKPMTAVKKKSTLFIQME 95
Query: 233 LCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEEN 292
C+ G L D I S ++ + QIL +++ H QG++HRDLKP N +E+
Sbjct: 96 YCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DES 152
Query: 293 SSLKAIDFGLS-------DYVKPD--------ERLNDIVGSAYYVAPEVLHRS--YGTEA 335
++K DFGL+ D +K D + L +G+A YVA EVL + Y +
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212
Query: 336 DMWSIGVIAYILLCGSRPFWARTES-GIFRAV----LKADPSFDEAPWPSLSPEAIDFVK 390
DM+S+G+I + ++ PF E I + + ++ P FD+ + E ++
Sbjct: 213 DMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDN---KMKVEK-KIIR 265
Query: 391 RLLNKDYRKRLTAAQALSHPWLANSH 416
L++ D KR A L+ WL H
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWLPVKH 291
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQG 273
+ +++ +Y ++I+ME GG LD L + G E ++ +IL + + H +
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALD--LLKPGPLEETYIATILREILKGLDYLHSER 136
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLNDIVGSAYYVAPEVLHRS-Y 331
+HRD+K N L + E +K DFG++ + + + N VG+ +++APEV+ +S Y
Sbjct: 137 KIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKR 391
+AD+WS+G+ A L G P + + K P E S +FV+
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEG---QHSKPFKEFVEA 250
Query: 392 LLNKDYRKRLTAAQALSHPWLA 413
LNKD R R TA + L H ++
Sbjct: 251 CLNKDPRFRPTAKELLKHKFIT 272
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ RE+++L +V FY A+ D I I ME GG L D++L + G+ E+
Sbjct: 70 IIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGK 127
Query: 258 VMVQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
V + ++ + + + ++HRD+KP N L S+ E +K DFG+S + D N V
Sbjct: 128 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQL-IDSMANSFV 183
Query: 317 GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTES-GIFRAVLKADPSFD 374
G+ Y++PE L + Y ++D+WS+G+ + G P + + S IF + D +
Sbjct: 184 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL---DYIVN 240
Query: 375 EAP--WPS--LSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
E P PS S E DFV + L K+ +R Q + H ++ S
Sbjct: 241 EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 285
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 9 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 43
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 44 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASA 96
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKPEN L ++ ++K DFGL+
Sbjct: 97 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE---GAIKLADFGLAR 151
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 272 PNKRISAKAALAHPFFQD 289
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 11 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 45
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 46 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 98
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKPEN L ++ ++K DFGL+
Sbjct: 99 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE---GAIKLADFGLAR 153
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 154 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 214 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 273
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 274 PNKRISAKAALAHPFFQD 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 9 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 43
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 44 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 97 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 151
Query: 305 -YVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 152 AFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 272 PNKRISAKAALAHPFFQD 289
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 10 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 44
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 45 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 97
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKPEN L ++ ++K DFGL+
Sbjct: 98 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE---GAIKLADFGLAR 152
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 153 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 272
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 273 PNKRISAKAALAHPFFQD 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 12 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 46
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 47 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASA 99
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKPEN L ++ ++K DFGL+
Sbjct: 100 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE---GAIKLADFGLAR 154
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 274
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 275 PNKRISAKAALAHPFFQD 292
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 10 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 44
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 45 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASA 97
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKPEN L ++ ++K DFGL+
Sbjct: 98 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE---GAIKLADFGLAR 152
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 153 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 272
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 273 PNKRISAKAALAHPFFQD 290
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 178
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK- 368
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 369 -------------------ADPSFDEAPW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
A P PW P PEAI RLL RLT
Sbjct: 239 LGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 299 EACAHSFFDELRDPNVKLPN 318
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 44/262 (16%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 96 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 154
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 155 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 212
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAV--- 366
+ S YY APE++ + Y + D+WS G + LL G F +SG+ + V
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEII 270
Query: 367 -----------LKADPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLT 402
+ +P++ E PW P PEAI RLL RLT
Sbjct: 271 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 330
Query: 403 AAQALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 331 PLEACAHSFFDELRDPNVKLPN 352
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 9 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 43
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 44 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 97 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 151
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 152 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 272 PNKRISAKAALAHPFFQD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 8 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 42
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 43 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 95
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 96 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 150
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 151 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 211 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 270
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 271 PNKRISAKAALAHPFFQD 288
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 13 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 47
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 48 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 100
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 101 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 155
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 156 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 215
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 216 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 275
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 276 PNKRISAKAALAHPFFQD 293
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 141 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 199
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 200 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 257
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 317
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 318 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 377
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 378 EACAHSFFDELRDPNVKLPN 397
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 8 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 42
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 43 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 95
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 96 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 150
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 151 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 211 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 270
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 271 PNKRISAKAALAHPFFQD 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 10 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 44
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 45 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 97
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 98 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 152
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 153 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 272
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 273 PNKRISAKAALAHPFFQD 290
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 66 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 124
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 125 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 182
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 242
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 243 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 302
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 303 EACAHSFFDELRDPNVKLPN 322
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 96 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 154
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 155 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 212
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 273 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 332
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 333 EACAHSFFDELRDPNVKLPN 352
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 44/262 (16%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 98 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 156
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 157 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 214
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAV--- 366
+ S YY APE++ + Y + D+WS G + LL G F +SG+ + V
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEII 272
Query: 367 -----------LKADPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLT 402
+ +P++ E PW P PEAI RLL RLT
Sbjct: 273 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 332
Query: 403 AAQALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 333 PLEACAHSFFDELRDPNVKLPN 354
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 9 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 43
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 44 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 97 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 151
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 152 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 272 PNKRISAKAALAHPFFQD 289
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 74 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 132
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 133 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 190
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 251 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 310
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 311 EACAHSFFDELRDPNVKLPN 330
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 178
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 299 EACAHSFFDELRDPNVKLPN 318
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 63 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 121
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 122 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 179
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 239
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 240 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 299
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 300 EACAHSFFDELRDPNVKLPN 319
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 90 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 148
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 149 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 206
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 266
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 267 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 326
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 327 EACAHSFFDELRDPNVKLPN 346
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 178
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 299 EACAHSFFDELRDPNVKLPN 318
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 67 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 125
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 126 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 183
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 243
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 244 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 303
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 304 EACAHSFFDELRDPNVKLPN 323
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 178
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 299 EACAHSFFDELRDPNVKLPN 318
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 81 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 139
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 140 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 197
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 257
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 258 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 317
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 318 EACAHSFFDELRDPNVKLPN 337
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 44/262 (16%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 100 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 158
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 159 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 216
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAV--- 366
+ S YY APE++ + Y + D+WS G + LL G F +SG+ + V
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEII 274
Query: 367 -----------LKADPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLT 402
+ +P++ E PW P PEAI RLL RLT
Sbjct: 275 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 334
Query: 403 AAQALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 335 PLEACAHSFFDELRDPNVKLPN 356
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 75 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 133
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 134 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 191
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 251
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 252 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 311
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 312 EACAHSFFDELRDPNVKLPN 331
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 178
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 299 EACAHSFFDELRDPNVKLPN 318
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 74 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 132
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 133 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 190
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 251 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 310
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 311 EACAHSFFDELRDPNVKLPN 330
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 70 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 128
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 129 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 186
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 246
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 247 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 306
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 307 EACAHSFFDELRDPNVKLPN 326
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 13 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 47
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 48 GVPSTAI------REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 100
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 101 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 155
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 156 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 215
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 216 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 275
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 276 PNKRISAKAALAHPFFQD 293
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 11 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 45
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 46 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASA 98
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 99 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 153
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 154 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 214 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 273
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 274 PNKRISAKAALAHPFFQD 291
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 12 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 46
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 47 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASA 99
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 100 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 154
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 274
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 275 PNKRISAKAALAHPFFQD 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 10 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 44
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 45 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 97
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 98 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 152
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 153 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 272
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 273 PNKRISAKAALAHPFFQD 290
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 11 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 45
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 46 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 98
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 99 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 153
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 154 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 214 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 273
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 274 PNKRISAKAALAHPFFQD 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 9 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 43
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 44 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 97 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 151
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 272 PNKRISAKAALAHPFFQD 289
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 8 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 42
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 43 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 95
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 96 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 150
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 151 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 211 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 270
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 271 PNKRISAKAALAHPFFQD 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 10 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 44
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 45 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 97
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 98 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 152
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 153 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 272
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 273 PNKRISAKAALAHPFFQD 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 12 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 46
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 47 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 99
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 100 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 154
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 274
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 275 PNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 11 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 45
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 46 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 98
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 99 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 153
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 154 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 214 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 273
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 274 PNKRISAKAALAHPFFQD 291
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 111/257 (43%), Gaps = 45/257 (17%)
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG 248
M IA+ RE+K+L+ L H+NLV + + Y+V E L D L G
Sbjct: 66 MVKKIAM----REIKLLKQLR-HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG 120
Query: 249 KYSEEDAKIV---MVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS-D 304
D ++V + QI++ + FCH ++HRD+KPEN L + ++ +K DFG +
Sbjct: 121 L----DYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFART 173
Query: 305 YVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGI 362
P E +D V + +Y APE+L YG D+W+IG + + G F ++
Sbjct: 174 LAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ 233
Query: 363 F--------------RAVLKADPSFD-------------EAPWPSLSPEAIDFVKRLLNK 395
+ + +P F E +P LS ID K+ L+
Sbjct: 234 LYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHI 293
Query: 396 DYRKRLTAAQALSHPWL 412
D KR A+ L H +
Sbjct: 294 DPDKRPFCAELLHHDFF 310
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 10/219 (4%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRG-GKYSEEDAKIVMVQILSVVAFCHFQ 272
+V AYE D + +V+ L GG+L I G + E A +I + H +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 273 GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-HRSY 331
+V+RDLKPEN L +++ ++ D GL+ +V + + VG+ Y+APEV+ + Y
Sbjct: 306 RIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKR 391
D W++G + Y ++ G PF R + V + E SP+A +
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQ 422
Query: 392 LLNKDYRKRL-----TAAQALSHPWLANSHDVKIPSDMI 425
LL KD +RL +A + HP + ++ + M+
Sbjct: 423 LLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGML 461
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 8 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 42
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 43 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 95
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 96 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 150
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 151 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 211 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 270
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 271 PNKRISAKAALAHPFFQD 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 9 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 43
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 44 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 97 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 151
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 272 PNKRISAKAALAHPFFQD 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 9 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 43
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 44 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 97 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 151
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 272 PNKRISAKAALAHPFFQD 289
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 12 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 46
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 47 GVPSTAI------REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 99
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 100 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 154
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 274
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 275 PNKRISAKAALAHPFFQD 292
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 10/219 (4%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSRG-GKYSEEDAKIVMVQILSVVAFCHFQ 272
+V AYE D + +V+ L GG+L I G + E A +I + H +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 273 GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-HRSY 331
+V+RDLKPEN L +++ ++ D GL+ +V + + VG+ Y+APEV+ + Y
Sbjct: 306 RIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 332 GTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKR 391
D W++G + Y ++ G PF R + V + E SP+A +
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQ 422
Query: 392 LLNKDYRKRL-----TAAQALSHPWLANSHDVKIPSDMI 425
LL KD +RL +A + HP + ++ + M+
Sbjct: 423 LLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGML 461
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 9 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 43
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 44 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 97 LTGIPLPL--IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 151
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 272 PNKRISAKAALAHPFFQD 289
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L E + R+ + +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 178
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 370 ------------DPSFDE--------APW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
+P++ E PW P PEAI RLL RLT
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 299 EACAHSFFDELRDPNVKLPN 318
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 129/316 (40%), Gaps = 63/316 (19%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 12 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 46
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR 246
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E S
Sbjct: 47 GVPSTAI------REISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASA 99
Query: 247 GGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-Y 305
K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+ +
Sbjct: 100 LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAF 156
Query: 306 VKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIF 363
P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
Query: 364 RAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKDYR 398
+ + + DE WP L + + ++L+ D
Sbjct: 217 FRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPN 276
Query: 399 KRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 277 KRISAKAALAHPFFQD 292
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 16/228 (7%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ RE+++L +V FY A+ D I I ME GG L D++L + G+ E+
Sbjct: 51 IIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGK 108
Query: 258 VMVQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
V + ++ + + + ++HRD+KP N L S+ E +K DFG+S + D N V
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFV 164
Query: 317 GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFW---ARTESGIFRAVLKADPS 372
G+ Y++PE L + Y ++D+WS+G+ + G P A+ +S A+ +
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDY 224
Query: 373 FDEAPWPSL-----SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
P P L S E DFV + L K+ +R Q + H ++ S
Sbjct: 225 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 272
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 9 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 43
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRIL 244
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E + +D
Sbjct: 44 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA 96
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G K + Q+L ++FCH V+HRDLKP+N L ++ ++K DFGL+
Sbjct: 97 LTGIPLPL--IKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLAR 151
Query: 305 -YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
+ P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 152 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 362 IFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKD 396
+ + + DE WP L + + ++L+ D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 397 YRKRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 272 PNKRISAKAALAHPFFQD 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRILSRGGKYSEEDAKI 257
RE+ +L+ L H N+V+ D ++ +Y+V E + +D G K
Sbjct: 51 REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKS 107
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-YVKPDERLNDIV 316
+ Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+ + P V
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEV 164
Query: 317 GSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
+ +Y APE+L + Y T D+WS+G I ++ F +E + + + D
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 375 EAPWPS-------------------------LSPEAIDFVKRLLNKDYRKRLTAAQALSH 409
E WP L + + ++L+ D KR++A AL+H
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 410 PWLAN 414
P+ +
Sbjct: 285 PFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGG--ELLDRILSRGGKYSEEDAKI 257
RE+ +L+ L H N+V+ D ++ +Y+V E + +D G K
Sbjct: 50 REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKS 106
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-YVKPDERLNDIV 316
+ Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+ + P V
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEV 163
Query: 317 GSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
+ +Y APE+L + Y T D+WS+G I ++ F +E + + + D
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223
Query: 375 EAPWPS-------------------------LSPEAIDFVKRLLNKDYRKRLTAAQALSH 409
E WP L + + ++L+ D KR++A AL+H
Sbjct: 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
Query: 410 PWLAN 414
P+ +
Sbjct: 284 PFFQD 288
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 77/320 (24%)
Query: 118 QFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQ 177
+++ +E + +GRG FG AK K + + A+K ++ P E
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNK---VDDCNYAIK-----------RIRLPNRE--- 44
Query: 178 FTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN----------- 226
+A E V REVK L L H +V++++A+ + +
Sbjct: 45 ---------------LAREKVMREVKALAKLE-HPGIVRYFNAWLEKNTTEKLQPSSPKV 88
Query: 227 -IYIVMELCKGGELLDRILSRGGKYSEEDAKI--VMVQILSVVAFCHFQGVVHRDLKPEN 283
+YI M+LC+ L D + R E + + +QI V F H +G++HRDLKP N
Sbjct: 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSN 148
Query: 284 FLFTSKEENSSLKAIDFGLSDYVKPDERLNDI-------------VGSAYYVAPEVLH-R 329
FT + +K DFGL + DE + VG+ Y++PE +H
Sbjct: 149 IFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN 205
Query: 330 SYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDE-------------A 376
SY + D++S+G+I + LL R + LK P F + +
Sbjct: 206 SYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLS 265
Query: 377 PWPSLSPEAIDFVKRLLNKD 396
P P PEAI+ ++ + +D
Sbjct: 266 PSPMERPEAINIIENAVFED 285
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 75/322 (23%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 12 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 46
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR 246
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E +D+ L +
Sbjct: 47 GVPSTAI------REISLLKELN-HPNIVKLLDVIHTENKLYLVFEH------VDQDLKK 93
Query: 247 GGKYSEEDA------KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDF 300
S K + Q+L +AFCH V+HRDLKP+N L ++ ++K DF
Sbjct: 94 FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADF 150
Query: 301 GLSD-YVKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWAR 357
GL+ + P V + +Y APE+L + Y T D+WS+G I ++ F
Sbjct: 151 GLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
Query: 358 TESGIFRAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRL 392
+E + + + DE WP L + + ++
Sbjct: 211 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 270
Query: 393 LNKDYRKRLTAAQALSHPWLAN 414
L+ D KR++A AL+HP+ +
Sbjct: 271 LHYDPNKRISAKAALAHPFFQD 292
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +L+ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 70 RELVLLKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHM--ELDHE 124
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ + +
Sbjct: 125 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMT 181
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WAR------T 358
V + YY APEV L Y D+WS+G I L+ GS F W + T
Sbjct: 182 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGT 241
Query: 359 ESGIFRAVLKAD--------PSFDEAPWPSLSPEAI----------------DFVKRLLN 394
S F A L+ P++ + L P+ I D + ++L
Sbjct: 242 PSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLV 301
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 302 IDPDKRISVDEALRHPYITVWYD 324
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 129/316 (40%), Gaps = 63/316 (19%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCC 186
E++G G +G A+ K L G+ VA+K I LD
Sbjct: 8 EKIGEGTYGVVYKARNK---LTGEVVALKKIR----------------------LDTETE 42
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR 246
+TAI RE+ +L+ L H N+V+ D ++ +Y+V E S
Sbjct: 43 GVPSTAI------REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASA 95
Query: 247 GGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-Y 305
K + Q+L +AFCH V+HRDLKP+N L ++ ++K DFGL+ +
Sbjct: 96 LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAF 152
Query: 306 VKPDERLNDIVGSAYYVAPEVLH--RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIF 363
P V + +Y APE+L + Y T D+WS+G I ++ F +E
Sbjct: 153 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212
Query: 364 RAVLKADPSFDEAPWPS-------------------------LSPEAIDFVKRLLNKDYR 398
+ + + DE WP L + + ++L+ D
Sbjct: 213 FRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPN 272
Query: 399 KRLTAAQALSHPWLAN 414
KR++A AL+HP+ +
Sbjct: 273 KRISAKAALAHPFFQD 288
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 140/326 (42%), Gaps = 60/326 (18%)
Query: 116 SKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVI---PKMIGVIFLQVHCPK 172
S ++ + +E +G+G FG A+ +L + A+K I + + I +V
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKAR---NALDSRYYAIKKIRHTEEKLSTILSEVMLLA 57
Query: 173 HENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVME 232
NHQ+ V+ A +N V+ A + ++I ME
Sbjct: 58 SLNHQYV----------------------VRYYAAWLERRNFVKPMTAVKKKSTLFIQME 95
Query: 233 LCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEEN 292
C+ L D I S ++ + QIL +++ H QG++HRDLKP N +E+
Sbjct: 96 YCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DES 152
Query: 293 SSLKAIDFGLS-------DYVKPD--------ERLNDIVGSAYYVAPEVLHRS--YGTEA 335
++K DFGL+ D +K D + L +G+A YVA EVL + Y +
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212
Query: 336 DMWSIGVIAYILLCGSRPFWARTES-GIFRAV----LKADPSFDEAPWPSLSPEAIDFVK 390
DM+S+G+I + ++ PF E I + + ++ P FD+ + E ++
Sbjct: 213 DMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDN---KMKVEK-KIIR 265
Query: 391 RLLNKDYRKRLTAAQALSHPWLANSH 416
L++ D KR A L+ WL H
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWLPVKH 291
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 40/260 (15%)
Query: 200 REVKILRALTGHKNLVQ----FYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE-- 253
RE++I+R L H N+V+ FY + E D +Y+ + L + R+ + +
Sbjct: 62 RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLP 120
Query: 254 --DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
K+ M Q+ +A+ H G+ HRD+KP+N L + + LK DFG + + E
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEP 178
Query: 312 LNDIVGSAYYVAPEVLHRS--YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLK- 368
+ S YY APE++ + Y + D+WS G + LL G F + ++K
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 369 -------------------ADPSFDEAPW-----PSLSPEAIDFVKRLLNKDYRKRLTAA 404
A P PW P PEAI RLL RLT
Sbjct: 239 LGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 405 QALSHPWLANSHD--VKIPS 422
+A +H + D VK+P+
Sbjct: 299 EACAHSFFDELRDPNVKLPN 318
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 44/247 (17%)
Query: 118 QFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQ 177
Q +E+ E +G G FGY + G+ VA+K + + PK+
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQD---TGEQVAIKQCRQELS--------PKNR--- 56
Query: 178 FTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYED------DDNIYIVM 231
E CL E++I++ L H N+V + + +D + M
Sbjct: 57 -----ERWCL-------------EIQIMKKLN-HPNVVSAREVPDGLQKLAPNDLPLLAM 97
Query: 232 ELCKGGEL---LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
E C+GG+L L++ + G E + ++ I S + + H ++HRDLKPEN +
Sbjct: 98 EYCEGGDLRKYLNQFENCCG-LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQP 156
Query: 289 KEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYIL 347
+ K ID G + + E + VG+ Y+APE+L + Y D WS G +A+
Sbjct: 157 GPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC 216
Query: 348 LCGSRPF 354
+ G RPF
Sbjct: 217 ITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 44/247 (17%)
Query: 118 QFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQ 177
Q +E+ E +G G FGY + G+ VA+K + + PK+
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQD---TGEQVAIKQCRQELS--------PKNR--- 57
Query: 178 FTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYED------DDNIYIVM 231
E CL E++I++ L H N+V + + +D + M
Sbjct: 58 -----ERWCL-------------EIQIMKKLN-HPNVVSAREVPDGLQKLAPNDLPLLAM 98
Query: 232 ELCKGGEL---LDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
E C+GG+L L++ + G E + ++ I S + + H ++HRDLKPEN +
Sbjct: 99 EYCEGGDLRKYLNQFENCCG-LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQP 157
Query: 289 KEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYIL 347
+ K ID G + + E + VG+ Y+APE+L + Y D WS G +A+
Sbjct: 158 GPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC 217
Query: 348 LCGSRPF 354
+ G RPF
Sbjct: 218 ITGFRPF 224
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 107/248 (43%), Gaps = 38/248 (15%)
Query: 200 REVKILRALTG--HKNLVQFYDA-----YEDDDNIYIVMELCKGG--ELLDRILSRGGKY 250
REV +LR L H N+V+ +D + + + +V E LD++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--V 117
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
E K +M Q+L + F H VVHRDLKP+N L TS + +K DFGL+
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQM 174
Query: 311 RLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
L +V + +Y APEV L SY T D+WS+G I + F ++ +L
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Query: 370 DPSFDEAPWP-----------SLSPEAI------------DFVKRLLNKDYRKRLTAAQA 406
E WP S S + I D + + L + KR++A A
Sbjct: 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 407 LSHPWLAN 414
LSHP+ +
Sbjct: 295 LSHPYFQD 302
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 109/244 (44%), Gaps = 46/244 (18%)
Query: 121 AHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTI 180
A L E +G G FG K + G +VAVK H P + Q
Sbjct: 7 AELTLEEIIGIGGFG-----KVYRAFWIGDEVAVKA----------ARHDPDEDISQ--- 48
Query: 181 LDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELL 240
IE+VR+E K+ A+ H N++ + N+ +VME +GG L
Sbjct: 49 -------------TIENVRQEAKLF-AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL- 93
Query: 241 DRILSRGGKYSEEDAKI-VMVQILSVVAFCHFQGVV---HRDLKPENFLFTSKEENSS-- 294
+R+LS GK D + VQI + + H + +V HRDLK N L K EN
Sbjct: 94 NRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLS 151
Query: 295 ---LKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCG 350
LK DFGL+ +++ G+ ++APEV+ S + +D+WS GV+ + LL G
Sbjct: 152 NKILKITDFGLAREWHRTTKMS-AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
Query: 351 SRPF 354
PF
Sbjct: 211 EVPF 214
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 52/259 (20%)
Query: 204 ILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+L + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQM--ELDHERMSY 130
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L + H G++HRDLKP N + S +++LK +DFGL+ + V
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVV 187
Query: 318 SAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WAR------TESGI 362
+ YY APEV L Y D+WS+GVI ++ G F W + T S
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 363 F--------RAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLNKDYR 398
F R ++ P + + L P+ + D + ++L D
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 399 KRLTAAQALSHPWLANSHD 417
KR++ +AL HP++ +D
Sbjct: 308 KRISVDEALQHPYINVWYD 326
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 107/248 (43%), Gaps = 38/248 (15%)
Query: 200 REVKILRALTG--HKNLVQFYDA-----YEDDDNIYIVMELCKGG--ELLDRILSRGGKY 250
REV +LR L H N+V+ +D + + + +V E LD++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--V 117
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
E K +M Q+L + F H VVHRDLKP+N L TS + +K DFGL+
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQM 174
Query: 311 RLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
L +V + +Y APEV L SY T D+WS+G I + F ++ +L
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Query: 370 DPSFDEAPWP-----------SLSPEAI------------DFVKRLLNKDYRKRLTAAQA 406
E WP S S + I D + + L + KR++A A
Sbjct: 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 407 LSHPWLAN 414
LSHP+ +
Sbjct: 295 LSHPYFQD 302
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 52/259 (20%)
Query: 204 ILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+L + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQM--ELDHERMSY 130
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L + H G++HRDLKP N + S +++LK +DFGL+ + V
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVV 187
Query: 318 SAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WAR------TESGI 362
+ YY APEV L Y D+WS+GVI ++ G F W + T S
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 363 F--------RAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLNKDYR 398
F R ++ P + + L P+ + D + ++L D
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 399 KRLTAAQALSHPWLANSHD 417
KR++ +AL HP++ +D
Sbjct: 308 KRISVDEALQHPYINVWYD 326
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +L+ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 72 RELVLLKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHM--ELDHE 126
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMT 183
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WAR------T 358
V + YY APEV L Y D+WS+G I L+ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGT 243
Query: 359 ESGIFRAVL-----------------KADPSFDEAPWPSLS-------PEAIDFVKRLLN 394
S F A L K + F + +PS S +A D + ++L
Sbjct: 244 PSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLV 303
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 304 IDPDKRISVDEALRHPYITVWYD 326
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 200 REVKILRALTG--HKNLVQFYDA-----YEDDDNIYIVMELCKGG--ELLDRILSRGGKY 250
REV +LR L H N+V+ +D + + + +V E LD++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--V 117
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
E K +M Q+L + F H VVHRDLKP+N L TS + +K DFGL+
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYSFQM 174
Query: 311 RLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
L +V + +Y APEV L SY T D+WS+G I + F ++ +L
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 234
Query: 370 DPSFDEAPWP-----------SLSPEAI------------DFVKRLLNKDYRKRLTAAQA 406
E WP S S + I D + + L + KR++A A
Sbjct: 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 407 LSHPWL 412
LSHP+
Sbjct: 295 LSHPYF 300
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 150/370 (40%), Gaps = 106/370 (28%)
Query: 117 KQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENH 176
+ + YEL +++G+G +G + ++ G+ VAVK
Sbjct: 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRT---GEVVAVK--------------------- 40
Query: 177 QFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAY--EDDDNIYIVMELC 234
I D + + + RE+ IL L+GH+N+V + ++D ++Y+V +
Sbjct: 41 --KIFDAF-----QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93
Query: 235 KGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSS 294
+ L ++ R + V+ Q++ V+ + H G++HRD+KP N L ++
Sbjct: 94 ETD--LHAVI-RANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAE---CH 147
Query: 295 LKAIDFGLS----------------------DYVKPDERLNDIVGSAYYVAPEVLHRS-- 330
+K DFGLS ++ L D V + +Y APE+L S
Sbjct: 148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTK 207
Query: 331 YGTEADMWSIGVIAYILLCGSRPF-WARTESGIFRAVLKAD-PSFDE------------- 375
Y DMWS+G I +LCG F + T + + R + D PS ++
Sbjct: 208 YTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMI 267
Query: 376 ------------------APWPSL----------SPEAIDFVKRLLNKDYRKRLTAAQAL 407
W +L + EA+D + +LL + KR++A AL
Sbjct: 268 ESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDAL 327
Query: 408 SHPWLANSHD 417
HP+++ H+
Sbjct: 328 KHPFVSIFHN 337
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 142/343 (41%), Gaps = 60/343 (17%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTI-- 180
Y LG+ +G G FG C + G+ A+K + + P+++N + I
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIES---GKRFALKKV----------LQDPRYKNRELDIMK 55
Query: 181 -LDEYCCL-----FMTTAIAIEDVRREVKILRALTGHKNLVQFYDAY-----EDDDNIYI 229
LD + F TT + L G N V + + + +
Sbjct: 56 VLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNV 115
Query: 230 VMELCKGG--ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFT 287
+ME ++L + G I + Q+ V F H G+ HRD+KP+N L
Sbjct: 116 IMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN 175
Query: 288 SKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAY 345
SK+ ++LK DFG + + P E + S +Y APE++ Y D+WSIG +
Sbjct: 176 SKD--NTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233
Query: 346 ILLCGSRPFWARTE-SGIFRAV-----------LKADPSFDEAPWPSLS--------PE- 384
L+ G F T + R + ++ +P + E +P+L PE
Sbjct: 234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEG 293
Query: 385 ----AIDFVKRLLNKDYRKRLTAAQALSHPW---LANSHDVKI 420
AID ++++L + R+ +A++HP+ L NS++ ++
Sbjct: 294 TPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEV 336
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 52/259 (20%)
Query: 204 ILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+L + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQM--ELDHERMSY 130
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L + H G++HRDLKP N + S +++LK +DFGL+ + V
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVV 187
Query: 318 SAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WAR------TESGI 362
+ YY APEV L Y D+WS+G I ++ G F W + T S
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 363 F--------RAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLNKDYR 398
F R ++ P + + L P+ + D + ++L D
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 399 KRLTAAQALSHPWLANSHD 417
KR++ +AL HP++ +D
Sbjct: 308 KRISVDEALQHPYINVWYD 326
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 102/244 (41%), Gaps = 34/244 (13%)
Query: 200 REVKILRALTG--HKNLVQFYD---AYEDDDNIYIVMELCKGGELLDRILSRGGK--YSE 252
REV +LR L H N+V+ D D I + + + L L +
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 253 EDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERL 312
E K +M Q L + F H +VHRDLKPEN L TS ++K DFGL+ L
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMAL 168
Query: 313 NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVI------AYILLCGSRPF----------- 354
+ +V + +Y APEVL +S Y T DMWS+G I L CG+
Sbjct: 169 DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
Query: 355 ------WARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALS 408
W R S A P ++ P + + +L + KR++A +AL
Sbjct: 229 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 288
Query: 409 HPWL 412
H +L
Sbjct: 289 HSYL 292
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 52/259 (20%)
Query: 204 ILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+L + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQM--ELDHERMSY 130
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L + H G++HRDLKP N + S +++LK +DFGL+ + V
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVV 187
Query: 318 SAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WAR------TESGI 362
+ YY APEV L Y D+WS+G I ++ G F W + T S
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 363 F--------RAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLNKDYR 398
F R ++ P + + L P+ + D + ++L D
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 399 KRLTAAQALSHPWLANSHD 417
KR++ +AL HP++ +D
Sbjct: 308 KRISVDEALQHPYINVWYD 326
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIY--IVMELCKGGELLDRILSRGGKYS--EEDA 255
RE ++L+ L HKN+V+ + E+ + ++ME C G L + Y E +
Sbjct: 56 REFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSL-KAIDFGLSDYVKPDERLND 314
IV+ ++ + G+VHR++KP N + E+ S+ K DFG + ++ DE+
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS 174
Query: 315 IVGSAYYVAPEVLHRS---------YGTEADMWSIGVIAYILLCGSRPF 354
+ G+ Y+ P++ R+ YG D+WSIGV Y GS PF
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 200 REVKILRALTG--HKNLVQFYD---AYEDDDNIYIVMELCKGGELLDRILSRGGK--YSE 252
REV +LR L H N+V+ D D I + + + L L +
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 119
Query: 253 EDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERL 312
E K +M Q L + F H +VHRDLKPEN L TS ++K DFGL+ L
Sbjct: 120 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMAL 176
Query: 313 NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVI------AYILLCGSRPF----------- 354
+V + +Y APEVL +S Y T DMWS+G I L CG+
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236
Query: 355 ------WARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALS 408
W R S A P ++ P + + +L + KR++A +AL
Sbjct: 237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296
Query: 409 HPWL 412
H +L
Sbjct: 297 HSYL 300
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 72 RELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQM--ELDHE 126
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S +++LK +DFGL+ +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMT 183
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WAR------T 358
V + YY APEV L Y D+WS+G I ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 359 ESGIF--------RAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
S F R ++ P + + L P+ + D + ++L
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 304 IDASKRISVDEALQHPYINVWYD 326
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIY--IVMELCKGGELLDRILSRGGKYS--EEDA 255
RE ++L+ L HKN+V+ + E+ + ++ME C G L + Y E +
Sbjct: 56 REFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSL-KAIDFGLSDYVKPDERLND 314
IV+ ++ + G+VHR++KP N + E+ S+ K DFG + ++ DE+
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX 174
Query: 315 IVGSAYYVAPEVLHRS---------YGTEADMWSIGVIAYILLCGSRPF 354
+ G+ Y+ P++ R+ YG D+WSIGV Y GS PF
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDNI----YIVMELCKGGELLDRILSRGGKYSEED 254
RRE + AL H +V YD E + YIVME G L D I+ G + +
Sbjct: 60 RREAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTPKR 117
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG----LSDYVKPDE 310
A V+ + F H G++HRD+KP N L ++ +++K +DFG ++D
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANILISA---TNAVKVVDFGIARAIADSGNSVX 174
Query: 311 RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ ++G+A Y++PE S +D++S+G + Y +L G PF + + ++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL-TAAQ 405
DP A LS + V + L K+ R TAA+
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 77 RELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQM--ELDHE 131
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 132 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 188
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WARTESGI-- 362
V + YY APEV L Y D+WS+G I ++C F W + +
Sbjct: 189 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 248
Query: 363 ------------FRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
R ++ P + + L P+ + D + ++L
Sbjct: 249 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 308
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 309 IDASKRISVDEALQHPYINVWYD 331
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
RE+++L +V FY A+ D I I ME GG L D++L + EE V
Sbjct: 63 RELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGKVS 120
Query: 260 VQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGS 318
+ +L +A+ + ++HRD+KP N L S+ E +K DFG+S + D N VG+
Sbjct: 121 IAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGT 176
Query: 319 AYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPF 354
Y+APE L + Y ++D+WS+G+ L G P
Sbjct: 177 RSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 66 RELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQM--ELDHE 120
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 177
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WARTESGI-- 362
V + YY APEV L Y D+WS+G I ++C F W + +
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 237
Query: 363 ------------FRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
R ++ P + + L P+ + D + ++L
Sbjct: 238 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 297
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 298 IDASKRISVDEALQHPYINVWYD 320
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 200 REVKILRALTG--HKNLVQFYD---AYEDDDNIYIVMELCKGGELLDRILSRGGK--YSE 252
REV +LR L H N+V+ D D I + + + L L +
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 253 EDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERL 312
E K +M Q L + F H +VHRDLKPEN L TS ++K DFGL+ L
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMAL 168
Query: 313 NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVI------AYILLCGSRPF----------- 354
+V + +Y APEVL +S Y T DMWS+G I L CG+
Sbjct: 169 APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
Query: 355 ------WARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALS 408
W R S A P ++ P + + +L + KR++A +AL
Sbjct: 229 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 288
Query: 409 HPWL 412
H +L
Sbjct: 289 HSYL 292
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 56/287 (19%)
Query: 189 MTTAI--AIEDVR---REVKILR--ALTGHKNLVQ----FYDAYEDDD-NIYIVMELCKG 236
M+ AI I+D R RE++I++ A+ H N+VQ FY E D +IY+ + +
Sbjct: 49 MSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV 108
Query: 237 GELLDRILSRGGKYSEEDA------KIVMVQILSVVAFCHFQGV--VHRDLKPENFLFTS 288
+ L R Y + A K+ + Q++ + H V HRD+KP N L
Sbjct: 109 PDTLHRCCR--NYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN- 165
Query: 289 KEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYI 346
E + +LK DFG + + P E + S YY APE++ ++ Y T D+WS+G I
Sbjct: 166 -EADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAE 224
Query: 347 LLCGSRPFWARTESGIFRAVL------------KADPSFDEA--------PWPSL----- 381
++ G F +G ++ K +PS + PW ++
Sbjct: 225 MMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHS 284
Query: 382 ---SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHD--VKIPSD 423
+ EA D + LL +R+ +AL HP+ HD K+P++
Sbjct: 285 LKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPATKLPNN 331
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 72 RELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQM--ELDHE 126
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WAR------T 358
V + YY APEV L Y D+WS+G I ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 359 ESGIF--------RAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
S F R ++ P + + L P+ + D + ++L
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 304 IDASKRISVDEALQHPYINVWYD 326
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 16/188 (8%)
Query: 220 AYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDL 279
A+ D + +++L GG+L LS+ G +SE D + +I+ + H + VV+RDL
Sbjct: 259 AFHTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL 317
Query: 280 KPENFLFTSKEENSSLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVLHR--SYGTEAD 336
KP N L +E+ ++ D GL+ D+ K ++ + VG+ Y+APEVL + +Y + AD
Sbjct: 318 KPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSSAD 372
Query: 337 MWSIGVIAYILLCGSRPFW---ARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLL 393
+S+G + + LL G PF + + I R L + S SPE ++ LL
Sbjct: 373 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEGLL 428
Query: 394 NKDYRKRL 401
+D +RL
Sbjct: 429 QRDVNRRL 436
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 16/188 (8%)
Query: 220 AYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDL 279
A+ D + +++L GG+L LS+ G +SE D + +I+ + H + VV+RDL
Sbjct: 260 AFHTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL 318
Query: 280 KPENFLFTSKEENSSLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVLHR--SYGTEAD 336
KP N L +E+ ++ D GL+ D+ K ++ + VG+ Y+APEVL + +Y + AD
Sbjct: 319 KPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSSAD 373
Query: 337 MWSIGVIAYILLCGSRPFW---ARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLL 393
+S+G + + LL G PF + + I R L + S SPE ++ LL
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEGLL 429
Query: 394 NKDYRKRL 401
+D +RL
Sbjct: 430 QRDVNRRL 437
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
REV +L+ L H+N+++ + ++++ E + L + + + S K +
Sbjct: 82 REVSLLKELQ-HRNIIELKSVIHHNHRLHLIFEYAEND--LKKYMDKNPDVSMRVIKSFL 138
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKE--ENSSLKAIDFGLSD-YVKPDERLNDIV 316
Q+++ V FCH + +HRDLKP+N L + + E LK DFGL+ + P + +
Sbjct: 139 YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI 198
Query: 317 GSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
+ +Y PE+L R Y T D+WSI I +L + F +E + + D
Sbjct: 199 ITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD 258
Query: 375 EAPWPSLS--PEAID--------FVKR----------------LLNKDYRKRLTAAQALS 408
+ WP ++ P+ +KR +L D KR++A AL
Sbjct: 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318
Query: 409 HPWLANS 415
HP+ +++
Sbjct: 319 HPYFSHN 325
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
RE+K+L+ L+ H N++ DA+ NI +V + + +L I + K M
Sbjct: 61 REIKLLQELS-HPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYM 118
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS-DYVKPDERLNDIVGS 318
+ L + + H ++HRDLKP N L +EN LK DFGL+ + P+ V +
Sbjct: 119 LMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVT 175
Query: 319 AYYVAPEVLH--RSYGTEADMWSIGVIAYILL 348
+Y APE+L R YG DMW++G I LL
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 215 VQFYDAYEDDDNIYIVMELCKGG--ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQ 272
V FY A + +++I MEL + +++ +G E+ + V I+ + H +
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 273 -GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLH--- 328
V+HRD+KP N L + +K DFG+S Y+ D + G Y+APE ++
Sbjct: 129 LSVIHRDVKPSNVLINAL---GQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPEL 185
Query: 329 --RSYGTEADMWSIGVIAYILLCGSRPF--WARTESGIFRAVLKADPSFDEAPWPSLSPE 384
+ Y ++D+WS+G+ L P+ W + + V + P + P S E
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP---QLPADKFSAE 242
Query: 385 AIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+DF + L K+ ++R T + + HP+
Sbjct: 243 FVDFTSQCLKKNSKERPTYPELMQHPFFT 271
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 16/188 (8%)
Query: 220 AYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDL 279
A+ D + +++L GG+L LS+ G +SE D + +I+ + H + VV+RDL
Sbjct: 260 AFHTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL 318
Query: 280 KPENFLFTSKEENSSLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVLHR--SYGTEAD 336
KP N L +E+ ++ D GL+ D+ K ++ + VG+ Y+APEVL + +Y + AD
Sbjct: 319 KPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSSAD 373
Query: 337 MWSIGVIAYILLCGSRPFW---ARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLL 393
+S+G + + LL G PF + + I R L + S SPE ++ LL
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEGLL 429
Query: 394 NKDYRKRL 401
+D +RL
Sbjct: 430 QRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 16/188 (8%)
Query: 220 AYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDL 279
A+ D + +++L GG+L LS+ G +SE D + +I+ + H + VV+RDL
Sbjct: 260 AFHTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL 318
Query: 280 KPENFLFTSKEENSSLKAIDFGLS-DYVKPDERLNDIVGSAYYVAPEVLHR--SYGTEAD 336
KP N L +E+ ++ D GL+ D+ K ++ + VG+ Y+APEVL + +Y + AD
Sbjct: 319 KPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSSAD 373
Query: 337 MWSIGVIAYILLCGSRPFW---ARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLL 393
+S+G + + LL G PF + + I R L + S SPE ++ LL
Sbjct: 374 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEGLL 429
Query: 394 NKDYRKRL 401
+D +RL
Sbjct: 430 QRDVNRRL 437
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGGELLDRILSR-GGKYSEEDAKIVMVQILSVVAFCHFQ 272
+VQ + + + +++I MEL G +++ R G E + V I+ + + +
Sbjct: 86 IVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 273 -GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL---- 327
GV+HRD+KP N L +E +K DFG+S + D+ + G A Y+APE +
Sbjct: 144 HGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPD 200
Query: 328 --HRSYGTEADMWSIGVIAYILLCGSRPFW-ARTESGIFRAVLKADPSFDEAPWPSLSPE 384
Y AD+WS+G+ L G P+ +T+ + VL+ +P S +
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM-GFSGD 259
Query: 385 AIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKI 420
FVK L KD+RKR + L H ++ +++
Sbjct: 260 FQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEV 295
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDNI----YIVMELCKGGELLDRILSRGGKYSEED 254
RRE + AL H +V YD E + YIVME G L D I+ G + +
Sbjct: 60 RREAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTPKR 117
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG----LSDYVKPDE 310
A V+ + F H G++HRD+KP N + ++ +++K +DFG ++D
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARAIADSGNSVT 174
Query: 311 RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ ++G+A Y++PE S +D++S+G + Y +L G PF + + ++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL-TAAQ 405
DP A LS + V + L K+ R TAA+
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 52/259 (20%)
Query: 204 ILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+L HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQM--ELDHERMSY 130
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ + V
Sbjct: 131 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVV 187
Query: 318 SAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR----------------PF 354
+ YY APEV L Y D+WS+G I IL G P
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 355 WARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLNKDYR 398
+ + R ++ P + +P L P+++ D + ++L D
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 399 KRLTAAQALSHPWLANSHD 417
KR++ AL HP++ +D
Sbjct: 308 KRISVDDALQHPYINVWYD 326
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ RE+++L +V FY A+ D I I ME GG L D++L + G+ E+
Sbjct: 113 IIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGK 170
Query: 258 VMVQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
V + ++ + + + ++HRD+KP N L S+ E +K DFG+S + D N V
Sbjct: 171 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFV 226
Query: 317 GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPF 354
G+ Y++PE L + Y ++D+WS+G+ + G P
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 72 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQM--ELDHE 126
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 127 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMT 183
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 244 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 303
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 304 IDPAKRISVDDALQHPYINVWYD 326
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 200 REVKILRALTG--HKNLVQFYD---AYEDDDNIYIVMELCKGGELLDRILSRGGK--YSE 252
REV +LR L H N+V+ D D I + + + L L +
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 253 EDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERL 312
E K +M Q L + F H +VHRDLKPEN L TS ++K DFGL+ L
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMAL 168
Query: 313 NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVI------AYILLCGSRPF----------- 354
+V + +Y APEVL +S Y T DMWS+G I L CG+
Sbjct: 169 FPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
Query: 355 ------WARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALS 408
W R S A P ++ P + + +L + KR++A +AL
Sbjct: 229 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 288
Query: 409 HPWL 412
H +L
Sbjct: 289 HSYL 292
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 65 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQM--ELDHE 119
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 120 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMT 176
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 296
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 297 IDPAKRISVDDALQHPYINVWYD 319
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 52/259 (20%)
Query: 204 ILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+L HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQM--ELDHERMSY 130
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ + V
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVV 187
Query: 318 SAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR----------------PF 354
+ YY APEV L Y D+WS+G I IL G P
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 355 WARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLNKDYR 398
+ + R ++ P + +P L P+++ D + ++L D
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 399 KRLTAAQALSHPWLANSHD 417
KR++ AL HP++ +D
Sbjct: 308 KRISVDDALQHPYINVWYD 326
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 110 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHE 164
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 221
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 281
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 282 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 341
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 342 IDPAKRISVDDALQHPYINVWYD 364
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 110 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHE 164
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 221
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 281
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 282 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 341
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 342 IDPAKRISVDDALQHPYINVWYD 364
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 52/259 (20%)
Query: 204 ILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+L HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQM--ELDHERMSY 130
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ + V
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVV 187
Query: 318 SAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WARTESGI------ 362
+ YY APEV L Y D+WS+G I ++C F W + +
Sbjct: 188 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 363 --------FRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLNKDYR 398
R ++ P + + L P+ + D + ++L D
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 399 KRLTAAQALSHPWLANSHD 417
KR++ +AL HP++ +D
Sbjct: 308 KRISVDEALQHPYINVWYD 326
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDNI----YIVMELCKGGELLDRILSRGGKYSEED 254
RRE + AL H +V YD E + YIVME G L D I+ G + +
Sbjct: 60 RREAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTPKR 117
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG----LSDYVKPDE 310
A V+ + F H G++HRD+KP N + ++ +++K +DFG ++D
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARAIADSGNSVT 174
Query: 311 RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ ++G+A Y++PE S +D++S+G + Y +L G PF + + ++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL-TAAQ 405
DP A LS + V + L K+ R TAA+
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDNI----YIVMELCKGGELLDRILSRGGKYSEED 254
RRE + AL H +V YD E + YIVME G L D I+ G + +
Sbjct: 60 RREAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTPKR 117
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG----LSDYVKPDE 310
A V+ + F H G++HRD+KP N + ++ +++K +DFG ++D
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARAIADSGNSVT 174
Query: 311 RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ ++G+A Y++PE S +D++S+G + Y +L G PF + + ++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL-TAAQ 405
DP A LS + V + L K+ R TAA+
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 73 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHE 127
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 184
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 244
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 245 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 304
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 305 IDPAKRISVDDALQHPYINVWYD 327
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 72 RELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQM--ELDHE 126
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WAR------T 358
V + YY APEV L Y D+WS+G I ++ G F W + T
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 359 ESGIF--------RAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
S F R ++ P + + L P+ + D + ++L
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 304 IDASKRISVDEALQHPYINVWYD 326
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 72 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHE 126
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 244 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 303
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 304 IDPAKRISVDDALQHPYINVWYD 326
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 65 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHE 119
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 120 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 176
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 296
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 297 IDPAKRISVDDALQHPYINVWYD 319
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 73 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHE 127
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 184
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 244
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 245 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 304
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 305 IDPAKRISVDDALQHPYINVWYD 327
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 72 RELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQM--ELDHE 126
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WARTESGI-- 362
V + YY APEV L Y D+WS+G I ++ G F W + +
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 363 ------------FRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
R ++ P + + L P+ + D + ++L
Sbjct: 244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 304 IDASKRISVDEALQHPYINVWYD 326
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 73 RELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQM--ELDHE 127
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 184
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WARTESGI-- 362
V + YY APEV L Y D+WS+G I ++ G F W + +
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 244
Query: 363 ------------FRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
R ++ P + + L P+ + D + ++L
Sbjct: 245 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 304
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 305 IDASKRISVDEALQHPYINVWYD 327
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 66 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHE 120
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 177
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 237
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 238 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 297
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 298 IDPAKRISVDDALQHPYINVWYD 320
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 71 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHE 125
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 126 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 182
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 183 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 242
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 243 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 302
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 303 IDPAKRISVDDALQHPYINVWYD 325
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 72 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHE 126
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 244 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 303
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 304 IDPAKRISVDDALQHPYINVWYD 326
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 14/218 (6%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDNI----YIVMELCKGGELLDRILSRGGKYSEED 254
RRE + AL H +V YD E + YIVME G L D I+ G + +
Sbjct: 77 RREAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTPKR 134
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG----LSDYVKPDE 310
A V+ + F H G++HRD+KP N + ++ +++K +DFG ++D
Sbjct: 135 AIEVIADACQALNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARAIADSGNSVT 191
Query: 311 RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ ++G+A Y++PE S +D++S+G + Y +L G PF + + ++
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 251
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQAL 407
DP A LS + V + L K+ R A +
Sbjct: 252 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 66 RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHE 120
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 177
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR-------------- 352
V + YY APEV L Y D+WS+G I IL G
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 237
Query: 353 --PFWARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
P + + R ++ P + +P L P+++ D + ++L
Sbjct: 238 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 297
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ AL HP++ +D
Sbjct: 298 IDPAKRISVDDALQHPYINVWYD 320
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ RE+++L +V FY A+ D I I ME GG L D++L + G+ E+
Sbjct: 51 IIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGK 108
Query: 258 VMVQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
V + ++ + + + ++HRD+KP N L S+ E +K DFG+S + D N V
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFV 164
Query: 317 GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPF 354
G+ Y++PE L + Y ++D+WS+G+ + G P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 52/259 (20%)
Query: 204 ILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+L HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQM--ELDHERMSY 130
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ + V
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVV 187
Query: 318 SAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA----DPS 372
+ YY APEV L Y D+WS+G I ++C F R + V++ P+
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPA 247
Query: 373 FDEAPWPSL----------------------------------SPEAIDFVKRLLNKDYR 398
F + P++ + +A D + ++L D
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 399 KRLTAAQALSHPWLANSHD 417
KR++ +AL HP++ +D
Sbjct: 308 KRISVDEALQHPYINVWYD 326
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ RE+++L +V FY A+ D I I ME GG L D++L + G+ E+
Sbjct: 78 IIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGK 135
Query: 258 VMVQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
V + ++ + + + ++HRD+KP N L S+ E +K DFG+S + D N V
Sbjct: 136 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFV 191
Query: 317 GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPF 354
G+ Y++PE L + Y ++D+WS+G+ + G P
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 74 RELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQM--ELDHE 128
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 129 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMV 185
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WARTESGI-- 362
V + YY APEV L Y D+WS+G I ++ G F W + +
Sbjct: 186 PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 245
Query: 363 ------------FRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
R ++ P + + L P+ + D + ++L
Sbjct: 246 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 305
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 306 IDASKRISVDEALQHPYINVWYD 328
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ RE+++L +V FY A+ D I I ME GG L D++L + G+ E+
Sbjct: 51 IIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGK 108
Query: 258 VMVQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
V + ++ + + + ++HRD+KP N L S+ E +K DFG+S + D N V
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFV 164
Query: 317 GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPF 354
G+ Y++PE L + Y ++D+WS+G+ + G P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 215 VQFYDAYEDDDNIYIVMELCKGG--ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQ 272
V FY A + +++I MEL + +++ +G E+ + V I+ + H +
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 273 -GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLH--- 328
V+HRD+KP N L + + +K DFG+S Y+ G Y+APE ++
Sbjct: 173 LSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPEL 229
Query: 329 --RSYGTEADMWSIGVIAYILLCGSRPF--WARTESGIFRAVLKADPSFDEAPWPSLSPE 384
+ Y ++D+WS+G+ L P+ W + + V + P P S E
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PADKFSAE 286
Query: 385 AIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+DF + L K+ ++R T + + HP+
Sbjct: 287 FVDFTSQCLKKNSKERPTYPELMQHPFFT 315
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 143/351 (40%), Gaps = 88/351 (25%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
V+ YE ++G+G FG A+ +K GQ VA+K + ++E F
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRK---TGQKVALKKV------------LMENEKEGFP 61
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYED--------DDNIYIVM 231
I TA+ RE+KIL+ L H+N+V + +IY+V
Sbjct: 62 I----------TAL------REIKILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVF 104
Query: 232 ELCKG--GELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+ C+ LL +L K++ + K VM +L+ + + H ++HRD+K N L T
Sbjct: 105 DFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-- 159
Query: 290 EENSSLKAIDFGLSDYV------KPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIG 341
+ LK DFGL+ +P+ N +V + +Y PE+L R YG D+W G
Sbjct: 160 -RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 342 VIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSL-------------------- 381
I + S TE + + S WP++
Sbjct: 218 CIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVK 277
Query: 382 --------SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDM 424
P A+D + +LL D +R+ + AL+H + + +PSD+
Sbjct: 278 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD---PMPSDL 325
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 52/254 (20%)
Query: 204 ILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+L HKN++ + + E+ ++Y+VMEL L +++ + E
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQM--ELDHERMSY 130
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVG 317
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ + V
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVV 187
Query: 318 SAYYVAPEV-LHRSYGTEADMWSIGVIA------YILLCGSR----------------PF 354
+ YY APEV L Y D+WS+G I IL G P
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 355 WARTESGIFRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLNKDYR 398
+ + R ++ P + +P L P+++ D + ++L D
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 399 KRLTAAQALSHPWL 412
KR++ AL HP++
Sbjct: 308 KRISVDDALQHPYI 321
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 200 REVKILRALTGHKNLVQFYDAY------EDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
RE+ +++ + HKN++ + + E+ ++YIVMEL L +++ + E
Sbjct: 72 RELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQM--ELDHE 126
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
++ Q+L + H G++HRDLKP N + S + +LK +DFGL+ +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMT 183
Query: 314 DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF--------WARTESGI-- 362
V + YY APEV L Y D+WS+G I ++ G F W + +
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243
Query: 363 ------------FRAVLKADPSFDEAPWPSLSPEAI----------------DFVKRLLN 394
R ++ P + + L P+ + D + ++L
Sbjct: 244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLV 303
Query: 395 KDYRKRLTAAQALSHPWLANSHD 417
D KR++ +AL HP++ +D
Sbjct: 304 IDASKRISVDEALQHPYINVWYD 326
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ RE+++L +V FY A+ D I I ME GG L D++L + G+ E+
Sbjct: 51 IIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGK 108
Query: 258 VMVQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
V + ++ + + + ++HRD+KP N L S+ E +K DFG+S + D N V
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFV 164
Query: 317 GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPF 354
G+ Y++PE L + Y ++D+WS+G+ + G P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 198 VRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
+ RE+++L +V FY A+ D I I ME GG L D++L + G+ E+
Sbjct: 51 IIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGK 108
Query: 258 VMVQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV 316
V + ++ + + + ++HRD+KP N L S+ E +K DFG+S + D N V
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFV 164
Query: 317 GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPF 354
G+ Y++PE L + Y ++D+WS+G+ + G P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 143/351 (40%), Gaps = 88/351 (25%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
V+ YE ++G+G FG A+ +K GQ VA+K + ++E F
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRK---TGQKVALKKV------------LMENEKEGFP 60
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYED--------DDNIYIVM 231
I TA+ RE+KIL+ L H+N+V + +IY+V
Sbjct: 61 I----------TAL------REIKILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVF 103
Query: 232 ELCKG--GELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+ C+ LL +L K++ + K VM +L+ + + H ++HRD+K N L T
Sbjct: 104 DFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-- 158
Query: 290 EENSSLKAIDFGLSDYV------KPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIG 341
+ LK DFGL+ +P+ N +V + +Y PE+L R YG D+W G
Sbjct: 159 -RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAG 216
Query: 342 VIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSL-------------------- 381
I + S TE + + S WP++
Sbjct: 217 CIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVK 276
Query: 382 --------SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDM 424
P A+D + +LL D +R+ + AL+H + + +PSD+
Sbjct: 277 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD---PMPSDL 324
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 143/351 (40%), Gaps = 88/351 (25%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
V+ YE ++G+G FG A+ +K GQ VA+K + ++E F
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRK---TGQKVALKKV------------LMENEKEGFP 61
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYED--------DDNIYIVM 231
I TA+ RE+KIL+ L H+N+V + +IY+V
Sbjct: 62 I----------TAL------REIKILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVF 104
Query: 232 ELCKG--GELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+ C+ LL +L K++ + K VM +L+ + + H ++HRD+K N L T
Sbjct: 105 DFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-- 159
Query: 290 EENSSLKAIDFGLSDYV------KPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIG 341
+ LK DFGL+ +P+ N +V + +Y PE+L R YG D+W G
Sbjct: 160 -RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 342 VIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSL-------------------- 381
I + S TE + + S WP++
Sbjct: 218 CIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVK 277
Query: 382 --------SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDM 424
P A+D + +LL D +R+ + AL+H + + +PSD+
Sbjct: 278 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD---PMPSDL 325
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
+D+ +EV+ L+ L H N +Q+ Y + ++VME C G D + E +
Sbjct: 99 QDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSA-SDLLEVHKKPLQEVEI 156
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
V L +A+ H ++HRD+K N L + E +K DFG + + P N
Sbjct: 157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAP---ANXF 210
Query: 316 VGSAYYVAPEVL----HRSYGTEADMWSIGVIAYILLCGSRP--FWARTESGIFRAVLKA 369
VG+ Y++APEV+ Y + D+WS+G+ I L +P F S ++
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC-IELAERKPPLFNMNAMSALYHIAQNE 269
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDMI 425
P+ W S +FV L K + R T+ L H ++ + D+I
Sbjct: 270 SPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLI 322
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 143/351 (40%), Gaps = 88/351 (25%)
Query: 120 VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFT 179
V+ YE ++G+G FG A+ +K GQ VA+K + ++E F
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRK---TGQKVALKKV------------LMENEKEGFP 61
Query: 180 ILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN--------IYIVM 231
I TA+ RE+KIL+ L H+N+V + + IY+V
Sbjct: 62 I----------TAL------REIKILQLLK-HENVVNLIEICRTKASPYNRCKASIYLVF 104
Query: 232 ELCKG--GELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+ C+ LL +L K++ + K VM +L+ + + H ++HRD+K N L T
Sbjct: 105 DFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-- 159
Query: 290 EENSSLKAIDFGLSDYV------KPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIG 341
+ LK DFGL+ +P+ N +V + +Y PE+L R YG D+W G
Sbjct: 160 -RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 342 VIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSL-------------------- 381
I + S TE + + S WP++
Sbjct: 218 CIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVK 277
Query: 382 --------SPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDM 424
P A+D + +LL D +R+ + AL+H + + +PSD+
Sbjct: 278 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD---PMPSDL 325
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
+D+ +EV+ L+ L H N +Q+ Y + ++VME C G D + E +
Sbjct: 60 QDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSA-SDLLEVHKKPLQEVEI 117
Query: 256 KIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI 315
V L +A+ H ++HRD+K N L + E +K DFG + + P N
Sbjct: 118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAP---ANXF 171
Query: 316 VGSAYYVAPEVL----HRSYGTEADMWSIGVIAYILLCGSRP--FWARTESGIFRAVLKA 369
VG+ Y++APEV+ Y + D+WS+G I I L +P F S ++
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNE 230
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKIPSDMI 425
P+ W S +FV L K + R T+ L H ++ + D+I
Sbjct: 231 SPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLI 283
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 16/224 (7%)
Query: 194 AIEDVRREV---KILRALTG--HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG 248
A++ VR EV + L A G +V Y A + + I MEL +GG L +++ G
Sbjct: 103 AVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQG 161
Query: 249 KYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E+ A + Q L + + H + ++H D+K +N L +S +++L DFG + ++P
Sbjct: 162 CLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQP 219
Query: 309 DERLNDIV------GSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
D D++ G+ ++APE VL RS + D+WS + +L G P+
Sbjct: 220 DGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 279
Query: 362 IFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQ 405
+ + P E P PS +P ++ L K+ R++AA+
Sbjct: 280 LCLKIASEPPPVREIP-PSCAPLTAQAIQEGLRKEPIHRVSAAE 322
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 146/376 (38%), Gaps = 115/376 (30%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+YE+ +GRG +GY A K + ++VA+K + +M + + C K + TIL
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNAN---KNVAIKKVNRMFEDL---IDC-KRILREITIL 81
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD 241
+ ++ L L ++L++F D +YIV+E+ L
Sbjct: 82 NRLKSDYIIR-------------LHDLIIPEDLLKF-------DELYIVLEIADSD--LK 119
Query: 242 RILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
++ +E+ K ++ +L F H G++HRDLKP N L ++ S+K DFG
Sbjct: 120 KLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN---QDCSVKICDFG 176
Query: 302 LSDYVKPDERL---NDI-----------------------VGSAYYVAPE--VLHRSYGT 333
L+ + D+ + ND+ V + +Y APE +L +Y
Sbjct: 177 LARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTN 236
Query: 334 EADMWSIGVI-----------------AYILLCGSRPF--------------WARTESGI 362
D+WS G I + L GS F R + I
Sbjct: 237 SIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNI 296
Query: 363 FRAVLKADPSFD------------------------EAPWPSLSPEAIDFVKRLLNKDYR 398
V+ P D + S+S E ID ++ +L + +
Sbjct: 297 IFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQ 356
Query: 399 KRLTAAQALSHPWLAN 414
KR+T +ALSHP+L +
Sbjct: 357 KRITIDKALSHPYLKD 372
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 24/181 (13%)
Query: 256 KIVMVQILSVVAFCHFQ-GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLND 314
K ++ +L+ ++ H + + HRD+KP N L ++N +K DFG S+Y+ D+++
Sbjct: 154 KCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYM-VDKKIKG 209
Query: 315 IVGSAYYVAPEVL--HRSY-GTEADMWSIGVIAYILLCGSRPFWARTE-SGIFRAVLKAD 370
G+ ++ PE SY G + D+WS+G+ Y++ PF + +F + +
Sbjct: 210 SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKN 269
Query: 371 PSF----DEAPWP-----------SLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANS 415
+ + +P LS E IDF+K L K+ +R+T+ AL H WLA++
Sbjct: 270 IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329
Query: 416 H 416
+
Sbjct: 330 N 330
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDNI----YIVMELCKGGELLDRILSRGGKYSEED 254
RRE + AL H +V Y E + YIVME G L D I+ G + +
Sbjct: 60 RREAQNAAALN-HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTPKR 117
Query: 255 AKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG----LSDYVKPDE 310
A V+ + F H G++HRD+KP N + ++ +++K +DFG ++D
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARAIADSGNSVT 174
Query: 311 RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKA 369
+ ++G+A Y++PE S +D++S+G + Y +L G PF + + ++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL-TAAQ 405
DP A LS + V + L K+ R TAA+
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 135/326 (41%), Gaps = 60/326 (18%)
Query: 116 SKQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVI---PKMIGVIFLQVHCPK 172
S ++ + +E +G+G FG A+ +L + A+K I + + I +V
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKAR---NALDSRYYAIKKIRHTEEKLSTILSEVXLLA 57
Query: 173 HENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVME 232
NHQ+ V+ A +N V+ A + ++I E
Sbjct: 58 SLNHQYV----------------------VRYYAAWLERRNFVKPXTAVKKKSTLFIQXE 95
Query: 233 LCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEEN 292
C+ L D I S ++ + QIL +++ H QG++HR+LKP N +E+
Sbjct: 96 YCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFI---DES 152
Query: 293 SSLKAIDFGLS-------DYVKPD--------ERLNDIVGSAYYVAPEVLHRS--YGTEA 335
++K DFGL+ D +K D + L +G+A YVA EVL + Y +
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKI 212
Query: 336 DMWSIGVIAYILLCGSRPFWARTES----GIFRAV-LKADPSFDEAPWPSLSPEAIDFVK 390
D +S+G+I + + PF E R+V ++ P FD+ ++
Sbjct: 213 DXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVSIEFPPDFDDNKXKVEKK----IIR 265
Query: 391 RLLNKDYRKRLTAAQALSHPWLANSH 416
L++ D KR A L+ WL H
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWLPVKH 291
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 25/230 (10%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
REV++LR H N+++++ +D YI +ELC L + + + + + ++
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLL 124
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI--DFGLSDYVKPDE----RLN 313
Q S +A H +VHRDLKP N L + + +KA+ DFGL + R +
Sbjct: 125 QQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 314 DIVGSAYYVAPEVLHRSYGTE----ADMWSIGVIAYILLC-GSRPFWARTESGIFRAVLK 368
+ G+ ++APE+L D++S G + Y ++ GS PF + +
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------Q 237
Query: 369 ADPSFDEAPWPSLSPE------AIDFVKRLLNKDYRKRLTAAQALSHPWL 412
A+ L PE A + +++++ D +KR +A L HP+
Sbjct: 238 ANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 214 LVQFYDAYEDDDNIYIVMELCKGG---------ELLDRILSRGGKYSEEDAKIVMVQILS 264
+VQFY A + + +I MEL +LD ++ E KI + + +
Sbjct: 83 IVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPE-----EILGKITLATVKA 137
Query: 265 VVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAP 324
+ ++HRD+KP N L + + ++K DFG+S + G Y+AP
Sbjct: 138 LNHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAP 194
Query: 325 EVLHRS-----YGTEADMWSIGVIAYILLCGSRPF--WARTESGIFRAVLKADPSFDEAP 377
E + S Y +D+WS+G+ Y L G P+ W + + V P +
Sbjct: 195 ERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE 254
Query: 378 WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
SP I+FV L KD KR + L HP++
Sbjct: 255 EREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 215 VQFYDAYEDDDNIYIVMELCKGG--ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQ 272
V FY A + +++I EL + +++ +G E+ + V I+ + H +
Sbjct: 96 VTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 155
Query: 273 -GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLH--- 328
V+HRD+KP N L + +K DFG+S Y+ D + G Y APE ++
Sbjct: 156 LSVIHRDVKPSNVLINAL---GQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPEL 212
Query: 329 --RSYGTEADMWSIGVIAYILLCGSRPF--WARTESGIFRAVLKADPSFDEAPWPSLSPE 384
+ Y ++D+WS+G+ L P+ W + + V + P + P S E
Sbjct: 213 NQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSP---QLPADKFSAE 269
Query: 385 AIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+DF + L K+ ++R T + HP+
Sbjct: 270 FVDFTSQCLKKNSKERPTYPELXQHPFFT 298
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 16/224 (7%)
Query: 194 AIEDVRREV---KILRALTG--HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG 248
A++ VR EV + L A G +V Y A + + I MEL +GG L +++ G
Sbjct: 122 AVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQG 180
Query: 249 KYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E+ A + Q L + + H + ++H D+K +N L +S +++L DFG + ++P
Sbjct: 181 CLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQP 238
Query: 309 DERLNDIV------GSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESG 361
D ++ G+ ++APE VL RS + D+WS + +L G P+
Sbjct: 239 DGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 298
Query: 362 IFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQ 405
+ + P E P PS +P ++ L K+ R++AA+
Sbjct: 299 LCLKIASEPPPVREIP-PSCAPLTAQAIQEGLRKEPIHRVSAAE 341
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 200 REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVM 259
+EVK++R L H N+++F D + + E KGG L I S +Y
Sbjct: 56 KEVKVMRCLE-HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFA 114
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYV------------- 306
I S +A+ H ++HRDL N L EN ++ DFGL+ +
Sbjct: 115 KDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 307 -KPDERLN-DIVGSAYYVAPEVLH-RSYGTEADMWSIGVI 343
KPD + +VG+ Y++APE+++ RSY + D++S G++
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIV 211
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS---RGGKYSEEDAKI 257
E KIL A + +V A+E ++ +VM + GG++ I + + E A
Sbjct: 235 EKKIL-AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLNDIV 316
QI+S + H + +++RDLKPEN L +++ +++ D GL+ +K + +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 317 GSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDE 375
G+ ++APE +L Y D +++GV Y ++ PF AR E + LK
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQA 409
Query: 376 APWPS-LSPEAIDFVKRLLNKDYRKRL 401
+P SP + DF + LL KD KRL
Sbjct: 410 VTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS---RGGKYSEEDAKI 257
E KIL A + +V A+E ++ +VM + GG++ I + + E A
Sbjct: 235 EKKIL-AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLNDIV 316
QI+S + H + +++RDLKPEN L +++ +++ D GL+ +K + +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 317 GSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDE 375
G+ ++APE +L Y D +++GV Y ++ PF AR E + LK
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQA 409
Query: 376 APWPS-LSPEAIDFVKRLLNKDYRKRL 401
+P SP + DF + LL KD KRL
Sbjct: 410 VTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS---RGGKYSEEDAKI 257
E KIL A + +V A+E ++ +VM + GG++ I + + E A
Sbjct: 235 EKKIL-AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLNDIV 316
QI+S + H + +++RDLKPEN L +++ +++ D GL+ +K + +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 317 GSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDE 375
G+ ++APE +L Y D +++GV Y ++ PF AR E + LK
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQA 409
Query: 376 APWPS-LSPEAIDFVKRLLNKDYRKRL 401
+P SP + DF + LL KD KRL
Sbjct: 410 VTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS---RGGKYSEEDAKI 257
E KIL A + +V A+E ++ +VM + GG++ I + + E A
Sbjct: 235 EKKIL-AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 258 VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE-RLNDIV 316
QI+S + H + +++RDLKPEN L +++ +++ D GL+ +K + +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 317 GSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDE 375
G+ ++APE +L Y D +++GV Y ++ PF AR E + LK
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQA 409
Query: 376 APWPS-LSPEAIDFVKRLLNKDYRKRL 401
+P SP + DF + LL KD KRL
Sbjct: 410 VTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIVME G L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVMEYMSKGCL 99
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 156
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 157 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 216 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 47/248 (18%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQ-DVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
L +E+G G FG K G KGQ DVAVK+I +
Sbjct: 12 LLKELGSGQFGV-----VKLGKWKGQYDVAVKMIKE------------------------ 42
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
+++ ++ +E + + L+ H LV+FY + IYIV E G LL+ +
Sbjct: 43 -------GSMSEDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL 94
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
S G + + +AF +HRDL N L + + +K DFG++
Sbjct: 95 RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMT 151
Query: 304 DYVKPDERLNDIVGSAY---YVAPEVLHR-SYGTEADMWSIGVIAY-ILLCGSRPFWART 358
YV D+ ++ VG+ + + APEV H Y +++D+W+ G++ + + G P+ T
Sbjct: 152 RYVLDDQYVSS-VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210
Query: 359 ESGIFRAV 366
S + V
Sbjct: 211 NSEVVLKV 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
Query: 227 IYIVMELCKGGELLDRILSRGGKYSEEDAKI--VMVQILSVVAFCHFQGVVHRDLKPENF 284
+YI M+LC+ L D + R E + +QI V F H +G++HRDLKP N
Sbjct: 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNI 195
Query: 285 LFTSKEENSSLKAIDFGLSDYVKPDERLNDI-------------VGSAYYVAPEVLH-RS 330
FT + +K DFGL + DE + VG+ Y++PE +H +
Sbjct: 196 FFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNN 252
Query: 331 YGTEADMWSIGVIAYILL 348
Y + D++S+G+I + LL
Sbjct: 253 YSHKVDIFSLGLILFELL 270
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
L +G G FG KG G DVAVK+ L+V P E Q
Sbjct: 40 LSTRIGSGSFG-----TVYKGKWHG-DVAVKI---------LKVVDPTPEQFQ------- 77
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
R EV +LR T H N++ F Y DN+ IV + C+G L +
Sbjct: 78 ------------AFRNEVAVLRK-TRHVNILLFM-GYMTKDNLAIVTQWCEGSSLYKHLH 123
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
+ K+ + Q + + H + ++HRD+K N E ++K DFGL+
Sbjct: 124 VQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLAT 180
Query: 305 YVKP----DERLNDIVGSAYYVAPEVL----HRSYGTEADMWSIGVIAYILLCGSRPF 354
VK +++ GS ++APEV+ + + ++D++S G++ Y L+ G P+
Sbjct: 181 -VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV+E G L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVIEYMSKGSL 99
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 156
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 157 DFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 216 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 48/238 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 16 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 47
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 48 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 99
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
+ K+ + + Q + + H + ++HRDLK N E++++K DFGL+
Sbjct: 100 ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLAT 156
Query: 305 YVKP----DERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
VK + + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 157 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV+E G L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVIEYMSKGSL 99
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 156
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 157 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 216 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 46/237 (19%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 28 VGQRIGSGSFGTVY-----KGKWHG-DVAVKM---------LNVTAP------------- 59
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 60 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 111
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS- 303
+ K+ + + Q + + H + ++HRDLK N E++++K DFGL+
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLAT 168
Query: 304 --DYVKPDERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
+ + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 96/246 (39%), Gaps = 59/246 (23%)
Query: 121 AHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTI 180
A YE+ + +G G FG K G+ VAVK++
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAG--GRHVAVKIVKN--------------------- 50
Query: 181 LDEYCCLFMTTAIAIEDVRREVKILRALTGHK-----NLVQFYDAYEDDDNIYIVMELCK 235
+D YC E R E+++L L VQ + +E +I IV EL
Sbjct: 51 VDRYC----------EAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL- 99
Query: 236 GGELLDRILSRGG-KYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEE--- 291
G D I G + + + + QI V F H + H DLKPEN LF +
Sbjct: 100 GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEA 159
Query: 292 -------------NSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEV-LHRSYGTEADM 337
N +K +DFG + Y DE + +V + +Y APEV L + D+
Sbjct: 160 YNPKIKRDERTLINPDIKVVDFGSATY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDV 217
Query: 338 WSIGVI 343
WSIG I
Sbjct: 218 WSIGCI 223
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSL 99
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 156
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 157 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 216 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 54/239 (22%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
E+ E VGRG FG C AK + +DVA+K I + E F +
Sbjct: 12 EVEEVVGRGAFGVVCKAK-----WRAKDVAIKQIES------------ESERKAFIV--- 51
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
++R+ ++ H N+V+ Y A + + +VME +GG L + +
Sbjct: 52 -------------ELRQLSRV-----NHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVL 91
Query: 244 LSRGGK----YSEEDAKIVMVQILSVVAFCHF---QGVVHRDLKPENFLFTSKEENSSLK 296
G + Y+ A +Q VA+ H + ++HRDLKP N L + + LK
Sbjct: 92 --HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLK 147
Query: 297 AIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPF 354
DFG + ++ + + GSA ++APEV S Y + D++S G+I + ++ +PF
Sbjct: 148 ICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 46/237 (19%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 28 VGQRIGSGSFGTVY-----KGKWHG-DVAVKM---------LNVTAP------------- 59
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 60 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLH 111
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS- 303
+ K+ + + Q + + H + ++HRDLK N E++++K DFGL+
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLAT 168
Query: 304 --DYVKPDERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
+ + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVCEYMSKGSL 99
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 156
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 157 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 216 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 54/239 (22%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
E+ E VGRG FG C AK + +DVA+K I + E F +
Sbjct: 11 EVEEVVGRGAFGVVCKAK-----WRAKDVAIKQIES------------ESERKAFIV--- 50
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
++R+ ++ H N+V+ Y A + + +VME +GG L + +
Sbjct: 51 -------------ELRQLSRV-----NHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVL 90
Query: 244 LSRGGK----YSEEDAKIVMVQILSVVAFCHF---QGVVHRDLKPENFLFTSKEENSSLK 296
G + Y+ A +Q VA+ H + ++HRDLKP N L + + LK
Sbjct: 91 --HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLK 146
Query: 297 AIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPF 354
DFG + ++ + + GSA ++APEV S Y + D++S G+I + ++ +PF
Sbjct: 147 ICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 33 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSL 90
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 91 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 147
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 148 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 206
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 207 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 252
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 31 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSL 88
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 89 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 145
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 146 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 205 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 250
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 291 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSL 348
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 349 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 405
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 406 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + K+ +R T
Sbjct: 465 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 510
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 209 TTRVAIKTLKPGNMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSL 266
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 267 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 323
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 324 DFGLGRLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 383 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 428
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 39 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMNKGSL 96
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 97 LDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 153
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 154 DFGLARLIE-DNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + K+ +R T
Sbjct: 213 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 258
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
A++ ED E +++ L+ H LVQ Y + I +V E + G L D + ++ G ++
Sbjct: 43 AMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA 101
Query: 252 EEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
E + + + +A+ V+HRDL N L EN +K DFG++ +V D++
Sbjct: 102 AETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQ 157
Query: 312 LNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAYILLC-GSRPFWARTESGI 362
G+ + + +PEV S Y +++D+WS GV+ + + G P+ R+ S +
Sbjct: 158 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 39 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMNKGSL 96
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 97 LDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 153
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 154 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + K+ +R T
Sbjct: 213 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 258
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
++ +REV I+ L H N+V+ Y + + VME G+L R+L +
Sbjct: 68 QEFQREVFIMSNLN-HPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 256 KIVMVQILSVVAFCHFQG--VVHRDLKPENFLFTSKEENSSL--KAIDFGLSDYVKPDER 311
+M+ I + + Q +VHRDL+ N S +EN+ + K DFGLS +
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHS 182
Query: 312 LNDIVGSAYYVAPEVL---HRSYGTEADMWSIGVIAYILLCGSRPF 354
++ ++G+ ++APE + SY +AD +S +I Y +L G PF
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ + H+ LVQ Y A ++ IYIV E G L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKIR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSL 99
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 156
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 157 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 216 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSL 99
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL N L EN K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVG---ENLVCKVA 156
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 157 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 216 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGCL 99
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 156
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 157 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + KD +R T
Sbjct: 216 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 208 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSL 265
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 322
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 323 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + K+ +R T
Sbjct: 382 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
A++ ED E +++ L+ H LVQ Y + I +V E + G L D + ++ G ++
Sbjct: 43 AMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA 101
Query: 252 EEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
E + + + +A+ V+HRDL N L EN +K DFG++ +V D++
Sbjct: 102 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQ 157
Query: 312 LNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAYILLC-GSRPFWARTESGI 362
G+ + + +PEV S Y +++D+WS GV+ + + G P+ R+ S +
Sbjct: 158 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 35 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSL 92
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 93 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 149
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 150 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 208
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + K+ +R T
Sbjct: 209 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 254
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 208 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSL 265
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 322
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 323 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + K+ +R T
Sbjct: 382 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 95/246 (38%), Gaps = 59/246 (23%)
Query: 121 AHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTI 180
A YE+ + +G G FG K G+ VAVK++
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAG--GRHVAVKIVKN--------------------- 50
Query: 181 LDEYCCLFMTTAIAIEDVRREVKILRALTGHK-----NLVQFYDAYEDDDNIYIVMELCK 235
+D YC E R E+++L L VQ + +E +I IV EL
Sbjct: 51 VDRYC----------EAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL- 99
Query: 236 GGELLDRILSRGG-KYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEE--- 291
G D I G + + + + QI V F H + H DLKPEN LF +
Sbjct: 100 GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEA 159
Query: 292 -------------NSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEV-LHRSYGTEADM 337
N +K +DFG + Y DE + +V +Y APEV L + D+
Sbjct: 160 YNPKIKRDERTLINPDIKVVDFGSATY--DDEHHSTLVXXRHYRAPEVILALGWSQPCDV 217
Query: 338 WSIGVI 343
WSIG I
Sbjct: 218 WSIGCI 223
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
A++ ED E +++ L+ H LVQ Y + I +V E + G L D + ++ G ++
Sbjct: 41 AMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA 99
Query: 252 EEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
E + + + +A+ V+HRDL N L EN +K DFG++ +V D++
Sbjct: 100 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQ 155
Query: 312 LNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAYILLC-GSRPFWARTESGI 362
G+ + + +PEV S Y +++D+WS GV+ + + G P+ R+ S +
Sbjct: 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 211
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 57/273 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKK-GSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
LGE++GRG+FG S + + +L + +P + FLQ
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ---------------- 161
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
E +IL+ + H N+V+ IYIVMEL +GG+ L +
Sbjct: 162 -----------------EARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
+ G + + ++ + + + + +HRDL N L T E + LK DFG+S
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMS 260
Query: 304 DYVKPDERLNDIVGSA--------YYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRP 353
E + + ++ + APE L + Y +E+D+WS G++ + G+ P
Sbjct: 261 -----REEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI 386
+ + V K P P L P+A+
Sbjct: 316 YPNLSNQQTREFVEKG----GRLPCPELCPDAV 344
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
A++ ED E +++ L+ H LVQ Y + I +V E + G L D + ++ G ++
Sbjct: 46 AMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA 104
Query: 252 EEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
E + + + +A+ V+HRDL N L EN +K DFG++ +V D++
Sbjct: 105 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQ 160
Query: 312 LNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAYILLC-GSRPFWARTESGI 362
G+ + + +PEV S Y +++D+WS GV+ + + G P+ R+ S +
Sbjct: 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 57/273 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKK-GSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
LGE++GRG+FG S + + +L + +P + FLQ
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ---------------- 161
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
E +IL+ + H N+V+ IYIVMEL +GG+ L +
Sbjct: 162 -----------------EARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
Query: 244 LSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS 303
+ G + + ++ + + + + +HRDL N L T E + LK DFG+S
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMS 260
Query: 304 DYVKPDERLNDIVGSA--------YYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRP 353
E + + ++ + APE L + Y +E+D+WS G++ + G+ P
Sbjct: 261 -----REEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI 386
+ + V K P P L P+A+
Sbjct: 316 YPNLSNQQTREFVEKG----GRLPCPELCPDAV 344
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
A++ ED E +++ L+ H LVQ Y + I +V E + G L D + ++ G ++
Sbjct: 44 AMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFA 102
Query: 252 EEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
E + + + +A+ V+HRDL N L EN +K DFG++ +V D++
Sbjct: 103 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQ 158
Query: 312 LNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAYILLC-GSRPFWARTESGI 362
G+ + + +PEV S Y +++D+WS GV+ + + G P+ R+ S +
Sbjct: 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 214
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 104/257 (40%), Gaps = 67/257 (26%)
Query: 122 HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+Y + +GRG +GY A K ++VA+K + +M + + C +
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTE---KNVAIKKVNRMFEDL---IDCKR--------- 71
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDD-----NIYIVMELCKG 236
+ RE+ IL L +++ YD DD +YIV+E+
Sbjct: 72 ----------------ILREITILNRLKSDY-IIRLYDLIIPDDLLKFDELYIVLEIADS 114
Query: 237 GELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLK 296
L ++ +EE K ++ +L F H G++HRDLKP N L ++ S+K
Sbjct: 115 D--LKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN---QDCSVK 169
Query: 297 AIDFGLSDYVKPDERLNDI-----------------------VGSAYYVAPE--VLHRSY 331
DFGL+ + ++ N + V + +Y APE +L +Y
Sbjct: 170 VCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY 229
Query: 332 GTEADMWSIGVIAYILL 348
D+WS G I LL
Sbjct: 230 TKSIDIWSTGCIFAELL 246
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 378 WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWLANSHDVKI 420
+PS+S + I+ ++ +L + KR+T QAL HP+L + K+
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKL 373
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ IYIV E G L
Sbjct: 208 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIYIVGEYMSKGSL 265
Query: 240 LDRILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 322
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 323 DFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + K+ +R T
Sbjct: 382 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 107/260 (41%), Gaps = 61/260 (23%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
E G+ +G G FG +A A S G V+++V KM L+ E
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTG--VSIQVAVKM-----LKEKADSSER-------- 92
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
E + E+K++ L H+N+V A IY++ E C G+LL+ +
Sbjct: 93 ------------EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140
Query: 244 LSRGGKYSE----------------------EDAKIVMVQILSVVAFCHFQGVVHRDLKP 281
S+ K+SE ED Q+ + F F+ VHRDL
Sbjct: 141 RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 200
Query: 282 ENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV-GSAY----YVAPEVLHRS-YGTEA 335
N L T +K DFGL+ + D N +V G+A ++APE L Y ++
Sbjct: 201 RNVLVT---HGKVVKICDFGLARDIMSDS--NYVVRGNARLPVKWMAPESLFEGIYTIKS 255
Query: 336 DMWSIGVIAY-ILLCGSRPF 354
D+WS G++ + I G P+
Sbjct: 256 DVWSYGILLWEIFSLGVNPY 275
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
++ +REV I+ L H N+V+ Y + + VME G+L R+L +
Sbjct: 68 QEFQREVFIMSNLN-HPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 256 KIVMVQILSVVAFCHFQG--VVHRDLKPENFLFTSKEENSSL--KAIDFGLSDYVKPDER 311
+M+ I + + Q +VHRDL+ N S +EN+ + K DFG S +
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHS 182
Query: 312 LNDIVGSAYYVAPEVL---HRSYGTEADMWSIGVIAYILLCGSRPF 354
++ ++G+ ++APE + SY +AD +S +I Y +L G PF
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R KYS
Sbjct: 80 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KYSL 136
Query: 253 EDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L +S N +K DFGLS Y++
Sbjct: 137 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 193
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 194 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R KYS
Sbjct: 54 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KYSL 110
Query: 253 EDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L +S N +K DFGLS Y++
Sbjct: 111 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 167
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 168 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R KYS
Sbjct: 55 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KYSL 111
Query: 253 EDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L +S N +K DFGLS Y++
Sbjct: 112 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 168
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 169 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R KYS
Sbjct: 57 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KYSL 113
Query: 253 EDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L +S N +K DFGLS Y++
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 170
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R KYS
Sbjct: 52 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KYSL 108
Query: 253 EDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L +S N +K DFGLS Y++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 165
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R KYS
Sbjct: 52 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KYSL 108
Query: 253 EDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L +S N +K DFGLS Y++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 165
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R KYS
Sbjct: 49 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KYSL 105
Query: 253 EDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L +S N +K DFGLS Y++
Sbjct: 106 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 162
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 82/207 (39%), Gaps = 19/207 (9%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H V+ A+E+ +Y+ ELC G L + G E + L +A H
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS 330
QG+VH D+KP N + K DFGL + G Y+APE+L S
Sbjct: 175 SQGLVHLDVKPANIFLGPR---GRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS 231
Query: 331 YGTEADMWSIGVIAYILLCG-----SRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEA 385
YGT AD++S+G+ + C W + G P F LS E
Sbjct: 232 YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL------PPEFTAG----LSSEL 281
Query: 386 IDFVKRLLNKDYRKRLTAAQALSHPWL 412
+ +L D + R TA L+ P L
Sbjct: 282 RSVLVMMLEPDPKLRATAEALLALPVL 308
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 37/185 (20%)
Query: 196 EDVRREVKILRALTGHKNLVQF--------YDAYEDDDNI-------------------- 227
E REVK L L H N+V + YD DD++
Sbjct: 50 EKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKC 108
Query: 228 -YIVMELCKGGELLDRILSR-GGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPEN-F 284
+I ME C G L I R G K + A + QI V + H + ++HRDLKP N F
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 285 LFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVI 343
L +K+ +K DFGL +K D + G+ Y++PE + + YG E D++++G+I
Sbjct: 169 LVDTKQ----VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 344 AYILL 348
LL
Sbjct: 225 LAELL 229
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 48/250 (19%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
LG+ +G G FG A+A AV V KM+ D+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------------------DD- 78
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T + D+ E+++++ + HKN++ A D +Y+++E G L + +
Sbjct: 79 -----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 245 SR---GGKYSEEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+R G +YS + ++ Q+ + + Q +HRDL N L T
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-- 191
Query: 290 EENSSLKAIDFGLS-DYVKPDERLNDIVGS--AYYVAPEVL-HRSYGTEADMWSIGVIAY 345
EN+ +K DFGL+ D D N G ++APE L R Y ++D+WS GV+ +
Sbjct: 192 -ENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 346 -ILLCGSRPF 354
I G P+
Sbjct: 251 EIFTLGGSPY 260
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
++ +REV I+ L H N+V+ Y + + VME G+L R+L +
Sbjct: 68 QEFQREVFIMSNLN-HPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 256 KIVMVQILSVVAFCHFQG--VVHRDLKPENFLFTSKEENSSL--KAIDFGLSDYVKPDER 311
+M+ I + + Q +VHRDL+ N S +EN+ + K DF LS +
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHS 182
Query: 312 LNDIVGSAYYVAPEVL---HRSYGTEADMWSIGVIAYILLCGSRPF 354
++ ++G+ ++APE + SY +AD +S +I Y +L G PF
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 126/330 (38%), Gaps = 63/330 (19%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
Y + + G +G C+ +G IP I +F V + N + D
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEG-----------IPVAIKRVFNTVSDGRTVN---ILSD 69
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-----IYIVMELCKGG 237
+ C + V RE+++L H N++ D + + +Y+V EL +
Sbjct: 70 SFLC---------KRVLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRT- 118
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
+L I + S + + M IL + H GVVHRDL P N L +N+ +
Sbjct: 119 DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITI 175
Query: 298 IDFGLSDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFW 355
DF L+ D V +Y APE++ + + DMWS G + + F
Sbjct: 176 CDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235
Query: 356 ART-------------ESGIFRAVLKADP--------SFDEAP---W----PSLSPEAID 387
T I V+ + P S P W P+ P A+D
Sbjct: 236 GSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALD 295
Query: 388 FVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ ++L + ++R++ QAL HP+ + D
Sbjct: 296 LIAKMLEFNPQRRISTEQALRHPYFESLFD 325
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 126/330 (38%), Gaps = 63/330 (19%)
Query: 123 YELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
Y + + G +G C+ +G IP I +F V + N + D
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEG-----------IPVAIKRVFNTVSDGRTVN---ILSD 69
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-----IYIVMELCKGG 237
+ C + V RE+++L H N++ D + + +Y+V EL +
Sbjct: 70 SFLC---------KRVLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRT- 118
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
+L I + S + + M IL + H GVVHRDL P N L +N+ +
Sbjct: 119 DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITI 175
Query: 298 IDFGLSDYVKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFW 355
DF L+ D V +Y APE++ + + DMWS G + + F
Sbjct: 176 CDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235
Query: 356 ART-------------ESGIFRAVLKADP--------SFDEAP---W----PSLSPEAID 387
T I V+ + P S P W P+ P A+D
Sbjct: 236 GSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALD 295
Query: 388 FVKRLLNKDYRKRLTAAQALSHPWLANSHD 417
+ ++L + ++R++ QAL HP+ + D
Sbjct: 296 LIAKMLEFNPQRRISTEQALRHPYFESLFD 325
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 122/297 (41%), Gaps = 84/297 (28%)
Query: 87 RRHGSVKPNEASIPEGNESDIGLDKNFGFSKQFVAHYELGEEVGRGHFGYTCSAKAKKGS 146
++H S KP AS+P + SD Q YE+ +G G +G+ C A K
Sbjct: 31 KQHHSSKPT-ASMPRPH-SDW----------QIPDRYEIRHLIGTGSYGHVCEAYDK--- 75
Query: 147 LKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILR 206
L+ + VA+K K++ V + C + + RE+ IL
Sbjct: 76 LEKRVVAIK---KILRVFEDLIDCKR-------------------------ILREIAILN 107
Query: 207 ALTGHKNLVQFYDAY-----EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQ 261
L H ++V+ D E D +Y+V+E+ ++ +E K ++
Sbjct: 108 RL-NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLLYN 164
Query: 262 ILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS---DY---------VKPD 309
+L V + H G++HRDLKP N L ++ S+K DFGL+ DY + P
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVN---QDCSVKVCDFGLARTVDYPENGNSQLPISPR 221
Query: 310 E----------------RLNDIVGSAYYVAPE--VLHRSYGTEADMWSIGVIAYILL 348
E +L V + +Y APE +L +Y D+WSIG I LL
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 378 WPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
+P+ S +AI +KR+L + KR+T + L+HP+
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 48/238 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 14 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 45
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 46 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 97
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
K+ + Q + + H + ++HRDLK N E+ ++K DFGL+
Sbjct: 98 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT 154
Query: 305 YVKP----DERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
VK + + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 155 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 48/238 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 12 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 43
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 44 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 95
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
K+ + Q + + H + ++HRDLK N E+ ++K DFGL+
Sbjct: 96 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT 152
Query: 305 YVKP----DERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
VK + + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 153 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 48/238 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 17 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 48
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 49 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 100
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
K+ + Q + + H + ++HRDLK N E+ ++K DFGL+
Sbjct: 101 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT 157
Query: 305 YVKP----DERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
VK + + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 158 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 48/238 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 17 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 48
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 49 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 100
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
K+ + Q + + H + ++HRDLK N E+ ++K DFGL+
Sbjct: 101 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT 157
Query: 305 YVKP----DERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
VK + + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 158 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+++ +D E +++ L+ H LVQ Y + I +V E + G L D + ++ G ++
Sbjct: 63 SMSEDDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA 121
Query: 252 EEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER 311
E + + + +A+ V+HRDL N L EN +K DFG++ +V D++
Sbjct: 122 AETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQ 177
Query: 312 LNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAYILLC-GSRPFWARTESGI 362
G+ + + +PEV S Y +++D+WS GV+ + + G P+ R+ S +
Sbjct: 178 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 233
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 12 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 43
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 44 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 95
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS- 303
K+ + Q + + H + ++HRDLK N E+ ++K DFGL+
Sbjct: 96 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT 152
Query: 304 --DYVKPDERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
+ + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 153 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 48/238 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 12 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 43
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 44 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLH 95
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
K+ + Q + + H + ++HRDLK N E+ ++K DFGL+
Sbjct: 96 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT 152
Query: 305 YVKP----DERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
VK + + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 153 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R K+S
Sbjct: 52 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KFSL 108
Query: 253 EDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L +S N +K DFGLS Y++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 165
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 166 XXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 196 EDVRREVKILRALTGHKNLVQF---YDAYEDDDN-------------IYIVMELCKGGEL 239
E REVK L L H N+V + +D ++ D ++I ME C G L
Sbjct: 49 EKAEREVKALAKLD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTL 107
Query: 240 LDRILSR-GGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPEN-FLFTSKEENSSLKA 297
I R G K + A + QI V + H + +++RDLKP N FL +K+ +K
Sbjct: 108 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ----VKI 163
Query: 298 IDFGLSDYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAYILL 348
DFGL +K D + G+ Y++PE + + YG E D++++G+I LL
Sbjct: 164 GDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 29/183 (15%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR---GGKYS 251
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R G +YS
Sbjct: 130 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 189
Query: 252 EEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
+ ++ Q+ + + Q +HRDL N L T EN+ +K D
Sbjct: 190 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIAD 246
Query: 300 FGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGS 351
FGL+ DY K + + ++APE L R Y ++D+WS GV+ + I G
Sbjct: 247 FGLARDINNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 303
Query: 352 RPF 354
P+
Sbjct: 304 SPY 306
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 32 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 63
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 64 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 115
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS- 303
K+ + Q + + H + ++HRDLK N E+ ++K DFGL+
Sbjct: 116 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT 172
Query: 304 --DYVKPDERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
+ + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 173 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 48/238 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 40 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 71
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 72 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 123
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
K+ + Q + + H + ++HRDLK N E+ ++K DFGL+
Sbjct: 124 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT 180
Query: 305 YVKP----DERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
VK + + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 181 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 48/238 (20%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 39 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 70
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 71 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 122
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
K+ + Q + + H + ++HRDLK N E+ ++K DFGL+
Sbjct: 123 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT 179
Query: 305 YVKP----DERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
VK + + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 180 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 44/242 (18%)
Query: 115 FSKQFVAHYELGEEVGRGHFGYTCSAKAK-KGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F K+F+ ++G GHFG + +G G+ VAVK + G
Sbjct: 18 FEKRFLKRIR---DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG----------- 63
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDD--DNIYIVM 231
NH I D+++E++ILR L H+N+V++ +D + I ++M
Sbjct: 64 GNH------------------IADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIKLIM 104
Query: 232 ELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEE 291
E G L + + K + + VQI + + + VHRDL N L S+ +
Sbjct: 105 EFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ 164
Query: 292 NSSLKAIDFGLSDYVKPDERL----NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYI 346
+K DFGL+ ++ D+ +D ++ APE L +S + +D+WS GV +
Sbjct: 165 ---VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 221
Query: 347 LL 348
LL
Sbjct: 222 LL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 44/242 (18%)
Query: 115 FSKQFVAHYELGEEVGRGHFGYTCSAKAK-KGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F K+F+ ++G GHFG + +G G+ VAVK + G
Sbjct: 6 FEKRFLKRIR---DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG----------- 51
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDD--DNIYIVM 231
NH I D+++E++ILR L H+N+V++ +D + I ++M
Sbjct: 52 GNH------------------IADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIKLIM 92
Query: 232 ELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEE 291
E G L + + K + + VQI + + + VHRDL N L S+ +
Sbjct: 93 EFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ 152
Query: 292 NSSLKAIDFGLSDYVKPDERL----NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYI 346
+K DFGL+ ++ D+ +D ++ APE L +S + +D+WS GV +
Sbjct: 153 ---VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 209
Query: 347 LL 348
LL
Sbjct: 210 LL 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+G+ +G G FG KG G DVAVK+ L V P
Sbjct: 40 VGQRIGSGSFG-----TVYKGKWHG-DVAVKM---------LNVTAP------------- 71
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T ++ + EV +LR T H N++ F Y + IV + C+G L +
Sbjct: 72 ------TPQQLQAFKNEVGVLRK-TRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLH 123
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS- 303
K+ + Q + + H + ++HRDLK N E+ ++K DFGL+
Sbjct: 124 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT 180
Query: 304 --DYVKPDERLNDIVGSAYYVAPEVLHRS----YGTEADMWSIGVIAYILLCGSRPF 354
+ + GS ++APEV+ Y ++D+++ G++ Y L+ G P+
Sbjct: 181 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 54/253 (21%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
LG+ +G G FG A+A AV V KM+ D+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------------------DD- 78
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T + D+ E+++++ + HKN++ A D +Y+++E G L + +
Sbjct: 79 -----ATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 245 SR---GGKYSEEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+R G +YS + ++ Q+ + + Q +HRDL N L T
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-- 191
Query: 290 EENSSLKAIDFGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGV 342
EN+ +K DFGL+ DY K + + ++APE L R Y ++D+WS GV
Sbjct: 192 -ENNVMKIADFGLARDINNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 343 IAY-ILLCGSRPF 354
+ + I G P+
Sbjct: 248 LMWEIFTLGGSPY 260
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 190 TTAIAIEDVR----------REVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL 239
TT +AI+ ++ +E ++++ L H+ LVQ Y A ++ I IV E G L
Sbjct: 32 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLY-AVVSEEPIXIVTEYMSKGSL 89
Query: 240 LDRILSRGGKYSEEDAKIVMV-QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
LD + GKY + M QI S +A+ VHRDL+ N L EN K
Sbjct: 90 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVA 146
Query: 299 DFGLSDYVKPDERLNDIVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR-P 353
DFGL+ ++ D G+ + + APE L+ + ++D+WS G++ L R P
Sbjct: 147 DFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 205
Query: 354 FWARTESGIFRAVLKADPSFDEAPWPSLSPEAI-DFVKRLLNKDYRKRLT 402
+ + R VL P P PE++ D + + K+ +R T
Sbjct: 206 Y----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 251
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 29/183 (15%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR---GGKYS 251
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R G +YS
Sbjct: 71 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 130
Query: 252 EEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
+ ++ Q+ + + Q +HRDL N L T EN+ +K D
Sbjct: 131 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT---ENNVMKIAD 187
Query: 300 FGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGS 351
FGL+ DY K + + ++APE L R Y ++D+WS GV+ + I G
Sbjct: 188 FGLARDINNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 244
Query: 352 RPF 354
P+
Sbjct: 245 SPY 247
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 54/253 (21%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
LG+ +G G FG A+A AV V KM+ D+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------------------DD- 78
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T + D+ E+++++ + HKN++ A D +Y+++E G L + +
Sbjct: 79 -----ATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 245 SR---GGKYSEEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+R G +YS + ++ Q+ + + Q +HRDL N L T
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-- 191
Query: 290 EENSSLKAIDFGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGV 342
EN+ +K DFGL+ DY K + + ++APE L R Y ++D+WS GV
Sbjct: 192 -ENNVMKIADFGLARDINNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 343 IAY-ILLCGSRPF 354
+ + I G P+
Sbjct: 248 LMWEIFTLGGSPY 260
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 29/183 (15%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR---GGKYS 251
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R G +YS
Sbjct: 73 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 132
Query: 252 EEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
+ ++ Q+ + + Q +HRDL N L T EN+ +K D
Sbjct: 133 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIAD 189
Query: 300 FGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGS 351
FGL+ DY K + + ++APE L R Y ++D+WS GV+ + I G
Sbjct: 190 FGLARDINNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 246
Query: 352 RPF 354
P+
Sbjct: 247 SPY 249
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 54/253 (21%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
LG+ +G G FG A+A AV V KM+ D+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------------------DD- 78
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T + D+ E+++++ + HKN++ A D +Y+++E G L + +
Sbjct: 79 -----ATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 245 SR---GGKYSEEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+R G +YS + ++ Q+ + + Q +HRDL N L T
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-- 191
Query: 290 EENSSLKAIDFGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGV 342
EN+ +K DFGL+ DY K + + ++APE L R Y ++D+WS GV
Sbjct: 192 -ENNVMKIADFGLARDINNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 343 IAY-ILLCGSRPF 354
+ + I G P+
Sbjct: 248 LMWEIFTLGGSPY 260
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
LG+ +G G FG A+A AV V KM+ D+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------------------DD- 78
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T + D+ E+++++ + HKN++ A D +Y+++E G L + +
Sbjct: 79 -----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 245 SR---GGKYSEEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+R G +YS + ++ Q+ + + Q +HRDL N L T
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-- 191
Query: 290 EENSSLKAIDFGLS---DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY 345
EN+ +K DFGL+ + + ++ + ++APE L R Y ++D+WS GV+ +
Sbjct: 192 -ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 346 -ILLCGSRPF 354
I G P+
Sbjct: 251 EIFTLGGSPY 260
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 88
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 89 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEX 127
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 128 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILI 180
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 181 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 238 IVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 29/183 (15%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR---GGKYS 251
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R G +YS
Sbjct: 76 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 135
Query: 252 EEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
+ ++ Q+ + + Q +HRDL N L T EN+ +K D
Sbjct: 136 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIAD 192
Query: 300 FGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGS 351
FGL+ DY K + + ++APE L R Y ++D+WS GV+ + I G
Sbjct: 193 FGLARDINNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 249
Query: 352 RPF 354
P+
Sbjct: 250 SPY 252
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R K+S
Sbjct: 432 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KFSL 488
Query: 253 EDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L +S N +K DFGLS Y++
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDST 545
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS-RGGKY 250
++++ E +++ L H LV+ Y ++ IYI+ E G LLD + S GGK
Sbjct: 49 TMSVQAFLEEANLMKTLQ-HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKV 107
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
QI +A+ + +HRDL+ N L + E+ K DFGL+ ++ D
Sbjct: 108 LLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIE-DN 163
Query: 311 RLNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRA 365
G+ + + APE ++ + ++D+WS G++ Y I+ G P+ RT + + A
Sbjct: 164 EYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTA 223
Query: 366 V 366
+
Sbjct: 224 L 224
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS-RGGKY 250
++++ E +++ L H LV+ Y ++ IYI+ E G LLD + S GGK
Sbjct: 48 TMSVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKV 106
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
QI +A+ + +HRDL+ N L + E+ K DFGL+ ++ D
Sbjct: 107 LLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIE-DN 162
Query: 311 RLNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRA 365
G+ + + APE ++ + ++++WS G++ Y I+ G P+ RT + + A
Sbjct: 163 EYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSA 222
Query: 366 V 366
+
Sbjct: 223 L 223
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 59
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 60 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEX 98
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 99 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 151
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 152 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 208
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 209 IVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 26 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 76
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 77 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEY 115
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 116 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 168
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 169 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 225
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 226 IVLWEVMSYGERPYWEMSNQDVIKAV 251
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 59
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 60 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEY 98
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 99 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 151
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 152 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 208
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 209 IVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 88
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 89 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEY 127
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 128 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILI 180
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 181 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 238 IVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 88
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 89 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEX 127
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 128 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 181 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 238 IVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 36 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 86
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 87 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEY 125
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 126 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 178
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 179 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 235
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 236 IVLWEVMSYGERPYWEMSNQDVIKAV 261
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 33/184 (17%)
Query: 200 REVKILRALTGHKNLVQFYDAY----EDDDN----IYIVMELCKGG--ELLDRILSRGGK 249
+EV ++ L+GH N+VQF A E+ D ++ ELCKG E L ++ SRG
Sbjct: 74 QEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPL 133
Query: 250 YSEEDAKIVMVQILSVVAFCHFQG--VVHRDLKPENFLFTSKEENSSLKAIDFGLS---- 303
+ KI Q V H Q ++HRDLK EN L +++ ++K DFG +
Sbjct: 134 SCDTVLKI-FYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTIS 189
Query: 304 ---DYVKPDERLNDIV------GSAYYVAPEV--LHRSY--GTEADMWSIGVIAYILLCG 350
DY +R + + Y PE+ L+ ++ G + D+W++G I Y+L
Sbjct: 190 HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFR 249
Query: 351 SRPF 354
PF
Sbjct: 250 QHPF 253
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 88
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 89 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEY 127
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 128 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 181 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 238 IVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 54/253 (21%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
LG+ +G G FG A+A AV V KM+ D+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------------------DD- 78
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T + D+ E+++++ + HKN++ A D +Y+++E G L + +
Sbjct: 79 -----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 245 SR---GGKYSEEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+R G +YS + ++ Q+ + + Q +HRDL N L T
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-- 191
Query: 290 EENSSLKAIDFGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGV 342
EN+ ++ DFGL+ DY K + + ++APE L R Y ++D+WS GV
Sbjct: 192 -ENNVMRIADFGLARDINNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 343 IAY-ILLCGSRPF 354
+ + I G P+
Sbjct: 248 LMWEIFTLGGSPY 260
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 88
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 89 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEY 127
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 128 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 181 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 238 IVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 88
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 89 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEY 127
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 128 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 181 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 238 IVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 88
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 89 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEY 127
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 128 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGLS ++ D E G + +PE + +R + + +D+WS G
Sbjct: 181 NS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 238 IVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQ-DVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
+E+G G FG K G +GQ DVA+K+I +
Sbjct: 30 KELGTGQFGVV-----KYGKWRGQYDVAIKMIKE-------------------------- 58
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
+++ ++ E K++ L+ H+ LVQ Y I+I+ E G LL+ +
Sbjct: 59 -----GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 112
Query: 246 RGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDY 305
++ + + + + + + +HRDL N L + +K DFGLS Y
Sbjct: 113 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRY 169
Query: 306 VKPDERLNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAY-ILLCGSRPF 354
V DE + VGS + + PEVL S + +++D+W+ GV+ + I G P+
Sbjct: 170 VLDDEETSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 211 HKNLVQFYDAYEDDDN-----IYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSV 265
H ++VQ ++ E D YIVME GG+ L R S+G K +A +++IL
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR--SKGQKLPVAEAIAYLLEILPA 194
Query: 266 VAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPE 325
+++ H G+V+ DLKPEN + T ++ LK ID G + + G+ + APE
Sbjct: 195 LSYLHSIGLVYNDLKPENIMLTEEQ----LKLIDLGAVSRIN---SFGYLYGTPGFQAPE 247
Query: 326 VLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFR--AVLKADPSFDEAPWPSLSP 383
++ D++++G L R G+ VLK S+
Sbjct: 248 IVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGR-------- 299
Query: 384 EAIDFVKRLLNKDYRKRLTAAQALS 408
++R ++ D R+R T A+ +S
Sbjct: 300 ----LLRRAIDPDPRQRFTTAEEMS 320
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 47/248 (18%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQ-DVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCL 187
+G G FG CS + K L G+ DVAV + +G
Sbjct: 51 IGAGEFGEVCSGRLK---LPGKRDVAVAIKTLKVGYT----------------------- 84
Query: 188 FMTTAIAIEDVRREVKILRALTG---HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
E RR+ ++ G H N+V + IV+E + G L +
Sbjct: 85 --------EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR 136
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
G+++ ++ I + + + G VHRDL N L S N K DFGLS
Sbjct: 137 KHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS---NLVCKVSDFGLSR 193
Query: 305 YVKPD-ERLNDIVGS---AYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPFWART 358
++ D E + G + APE + +R + + +D+WS G++ + ++ G RP+W +
Sbjct: 194 VIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 253
Query: 359 ESGIFRAV 366
+ +A+
Sbjct: 254 NQDVIKAI 261
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 262 ILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYY 321
IL + H ++H DLKPEN L ++ S +K IDFG S Y +R+ + S +Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILL-KQQGRSGIKVIDFGSSCY--EHQRVYTXIQSRFY 265
Query: 322 VAPEV-LHRSYGTEADMWSIGVIAYILLCG 350
APEV L YG DMWS+G I LL G
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 383 PEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
P +DF+K+ L D R+T QAL HPWL
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 213 NLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQ 272
++V +D E D +Y+ L G +L L R G + A ++ QI S + H
Sbjct: 95 HVVPIHDFGEIDGQLYVDXRLINGVDLA-AXLRRQGPLAPPRAVAIVRQIGSALDAAHAA 153
Query: 273 GVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDI---VGSAYYVAPEVLHR 329
G HRD+KPEN L S ++ + L +DFG++ DE+L + VG+ YY APE
Sbjct: 154 GATHRDVKPENILV-SADDFAYL--VDFGIASATT-DEKLTQLGNTVGTLYYXAPERFSE 209
Query: 330 SYGT-EADMWSIGVIAYILLCGSRPFWA 356
S+ T AD++++ + Y L GS P+
Sbjct: 210 SHATYRADIYALTCVLYECLTGSPPYQG 237
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 42/208 (20%)
Query: 191 TAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRG--- 247
T A +D +RE ++L L H+++V+FY D D + +V E K G+L + + G
Sbjct: 57 TLAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDA 115
Query: 248 -----GKYSEEDAKIVMVQILSV-------VAFCHFQGVVHRDLKPENFLFTSKEENSSL 295
G+ + ++ + Q+L + + + Q VHRDL N L + N +
Sbjct: 116 MILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLV 172
Query: 296 KAIDFGLSDYVKPDERLNDIVGSAYY------------VAPE-VLHRSYGTEADMWSIGV 342
K DFG+S D+ + YY + PE +++R + TE+D+WS GV
Sbjct: 173 KIGDFGMS---------RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 223
Query: 343 IAY-ILLCGSRPFWARTESGIFRAVLKA 369
I + I G +P++ + + + + +
Sbjct: 224 ILWEIFTYGKQPWFQLSNTEVIECITQG 251
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 262 ILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYY 321
IL + H ++H DLKPEN L ++ S +K IDFG S Y +R+ + S +Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILL-KQQGRSGIKVIDFGSSCY--EHQRVYXXIQSRFY 265
Query: 322 VAPEV-LHRSYGTEADMWSIGVIAYILLCG 350
APEV L YG DMWS+G I LL G
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 383 PEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
P +DF+K+ L D R+T QAL HPWL
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQ-DVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
+E+G G FG K G +GQ DVA+K+I +
Sbjct: 30 KELGTGQFGVV-----KYGKWRGQYDVAIKMIKE-------------------------- 58
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
+++ ++ E K++ L+ H+ LVQ Y I+I+ E G LL+ +
Sbjct: 59 -----GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 112
Query: 246 RGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDY 305
++ + + + + + + +HRDL N L + +K DFGLS Y
Sbjct: 113 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRY 169
Query: 306 VKPDERLNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAY-ILLCGSRPF 354
V DE + VGS + + PEVL S + +++D+W+ GV+ + I G P+
Sbjct: 170 VLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 262 ILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYY 321
IL + H ++H DLKPEN L ++ S +K IDFG S Y +R+ + S +Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILL-KQQGRSGIKVIDFGSSCY--EHQRVYTXIQSRFY 265
Query: 322 VAPEV-LHRSYGTEADMWSIGVIAYILLCG 350
APEV L YG DMWS+G I LL G
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 383 PEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
P +DF+K+ L D R+T QAL HPWL
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 108/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 88
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 89 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEY 127
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 128 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGL+ ++ D E G + +PE + +R + + +D+WS G
Sbjct: 181 NS---NLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 238 IVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQ-DVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
+E+G G FG K G +GQ DVA+K+I +
Sbjct: 10 KELGTGQFGV-----VKYGKWRGQYDVAIKMIKE-------------------------- 38
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
+++ ++ E K++ L+ H+ LVQ Y I+I+ E G LL+ +
Sbjct: 39 -----GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 92
Query: 246 RGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDY 305
++ + + + + + + +HRDL N L + +K DFGLS Y
Sbjct: 93 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRY 149
Query: 306 VKPDERLNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAY-ILLCGSRPF 354
V DE + VGS + + PEVL S + +++D+W+ GV+ + I G P+
Sbjct: 150 VLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQ-DVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
+E+G G FG K G +GQ DVA+K+I +
Sbjct: 15 KELGTGQFGV-----VKYGKWRGQYDVAIKMIKE-------------------------- 43
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
+++ ++ E K++ L+ H+ LVQ Y I+I+ E G LL+ +
Sbjct: 44 -----GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 97
Query: 246 RGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDY 305
++ + + + + + + +HRDL N L + +K DFGLS Y
Sbjct: 98 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRY 154
Query: 306 VKPDERLNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAY-ILLCGSRPF 354
V DE + VGS + + PEVL S + +++D+W+ GV+ + I G P+
Sbjct: 155 VLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQ-DVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
+E+G G FG K G +GQ DVA+K+I +
Sbjct: 14 KELGTGQFGV-----VKYGKWRGQYDVAIKMIKE-------------------------- 42
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
+++ ++ E K++ L+ H+ LVQ Y I+I+ E G LL+ +
Sbjct: 43 -----GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 96
Query: 246 RGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDY 305
++ + + + + + + +HRDL N L + +K DFGLS Y
Sbjct: 97 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRY 153
Query: 306 VKPDERLNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAY-ILLCGSRPF 354
V DE + VGS + + PEVL S + +++D+W+ GV+ + I G P+
Sbjct: 154 VLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 54/253 (21%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
LG+ +G G FG A+A AV V KM+ D+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------------------DD- 78
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T + D+ E+++++ + HKN++ A D +Y+++ G L + +
Sbjct: 79 -----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLR 133
Query: 245 SR---GGKYSEEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+R G +YS + ++ Q+ + + Q +HRDL N L T
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-- 191
Query: 290 EENSSLKAIDFGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGV 342
EN+ +K DFGL+ DY K + + ++APE L R Y ++D+WS GV
Sbjct: 192 -ENNVMKIADFGLARDINNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 343 IAY-ILLCGSRPF 354
+ + I G P+
Sbjct: 248 LMWEIFTLGGSPY 260
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 37/186 (19%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV 260
E++ L G N++ + +D++ I M + LD + S S ++ + M+
Sbjct: 69 ELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS----LSFQEVREYML 124
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD-----------YVKPD 309
+ + H G+VHRD+KP NFL+ + + +L +DFGL+ +V+ +
Sbjct: 125 NLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSE 182
Query: 310 ------------------ERLNDIVGSAYYVAPEVLHR--SYGTEADMWSIGVIAYILLC 349
+++ G+ + APEVL + + T DMWS GVI LL
Sbjct: 183 AQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242
Query: 350 GSRPFW 355
G PF+
Sbjct: 243 GRYPFY 248
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGEL--------LDRILS 245
A +D RE ++L L H+++V+FY + D + +V E K G+L D +L
Sbjct: 58 ARKDFHREAELLTNLQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLM 116
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
G E + M+ I +A + Q VHRDL N L EN +K DFG
Sbjct: 117 AEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENLLVKIGDFG 173
Query: 302 LSDYVKPDERLNDIVGSAYY------------VAPE-VLHRSYGTEADMWSIGVIAY-IL 347
+S D+ + YY + PE +++R + TE+D+WS+GV+ + I
Sbjct: 174 MS---------RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
Query: 348 LCGSRPFWARTESGIFRAVLKA 369
G +P++ + + + + +
Sbjct: 225 TYGKQPWYQLSNNEVIECITQG 246
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQ-DVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
+E+G G FG K G +GQ DVA+K+I +
Sbjct: 21 KELGTGQFGV-----VKYGKWRGQYDVAIKMIKE-------------------------- 49
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
+++ ++ E K++ L+ H+ LVQ Y I+I+ E G LL+ +
Sbjct: 50 -----GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 103
Query: 246 RGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDY 305
++ + + + + + + +HRDL N L + +K DFGLS Y
Sbjct: 104 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRY 160
Query: 306 VKPDERLNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAY-ILLCGSRPF 354
V DE + VGS + + PEVL S + +++D+W+ GV+ + I G P+
Sbjct: 161 VLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 48/250 (19%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
LG+ +G G FG A+A AV V KM+ D+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------------------DD- 78
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T + D+ E+++++ + HKN++ A D +Y+++E G L + +
Sbjct: 79 -----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 245 SRGGKYSEEDAKIVMV---------------QILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+R E I V Q+ + + Q +HRDL N L T
Sbjct: 134 ARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-- 191
Query: 290 EENSSLKAIDFGLS---DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY 345
EN+ +K DFGL+ + + ++ + ++APE L R Y ++D+WS GV+ +
Sbjct: 192 -ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 346 -ILLCGSRPF 354
I G P+
Sbjct: 251 EIFTLGGSPY 260
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 107/266 (40%), Gaps = 54/266 (20%)
Query: 115 FSKQFVA-HYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ A + + + VG G FG CS + K S K VA+K L+V +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT---------LKVGYTEK 88
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMEL 233
+ F E I+ H N+++ + IV E
Sbjct: 89 QRRDFL--------------------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEY 127
Query: 234 CKGGELLDRILSRGGKYSEEDAKIVMVQ-------ILSVVAFCHFQGVVHRDLKPENFLF 286
+ G L D L + DA+ ++Q I S + + G VHRDL N L
Sbjct: 128 MENGSL-DSFLRK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 287 TSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIG 341
S N K DFGL ++ D E G + +PE + +R + + +D+WS G
Sbjct: 181 NS---NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 342 VIAY-ILLCGSRPFWARTESGIFRAV 366
++ + ++ G RP+W + + +AV
Sbjct: 238 IVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 40/214 (18%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI++E G LLD + R
Sbjct: 48 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQ 104
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 161
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFR 364
D G+ + + APE L + + ++D+W+ GV+ W G+
Sbjct: 162 DTXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL----------LWEIATYGM-- 208
Query: 365 AVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYR 398
+P+P + P V LL KDYR
Sbjct: 209 -----------SPYPGIDPSQ---VYELLEKDYR 228
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 54/253 (21%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
LG+ +G G FG A+A AV V KM+ D+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-------------------DD- 78
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
T + D+ E+++++ + HKN++ A D +Y+++ G L + +
Sbjct: 79 -----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLR 133
Query: 245 SR---GGKYSEEDAKI------------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSK 289
+R G +YS + ++ Q+ + + Q +HRDL N L T
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-- 191
Query: 290 EENSSLKAIDFGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGV 342
EN+ +K DFGL+ DY K + + ++APE L R Y ++D+WS GV
Sbjct: 192 -ENNVMKIADFGLARDINNIDYYK---KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 247
Query: 343 IAY-ILLCGSRPF 354
+ + I G P+
Sbjct: 248 LMWEIFTLGGSPY 260
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 40/214 (18%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 48 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 104
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 161
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFR 364
D G+ + + APE L + + ++D+W+ GV+ W G+
Sbjct: 162 D-TFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL----------LWEIATYGM-- 208
Query: 365 AVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYR 398
+P+P + P V LL KDYR
Sbjct: 209 -----------SPYPGIDPSQ---VYELLEKDYR 228
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 47/238 (19%)
Query: 125 LGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
+ E++G G FG + G DVAVK++ ++ ++E+
Sbjct: 41 IKEKIGAGSFG-----TVHRAEWHGSDVAVKIL--------------MEQDFHAERVNEF 81
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRIL 244
REV I++ L H N+V F A N+ IV E G L R+L
Sbjct: 82 L--------------REVAIMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLL 125
Query: 245 SRGGKYSEEDAKIVMVQILSV---VAFCHFQG--VVHRDLKPENFLFTSKEENSSLKAID 299
+ G + D + + V + + H + +VHRDLK N L K ++K D
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKK---YTVKVCD 182
Query: 300 FGLSDYVKPDERLND--IVGSAYYVAPEVLHRSYGTE-ADMWSIGVIAYILLCGSRPF 354
FGLS +K L G+ ++APEVL E +D++S GVI + L +P+
Sbjct: 183 FGLS-RLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 200 REVKILRALTGHKNLVQFYDAY--EDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKI 257
RE+ +LR L H N++ + D ++++ + + R K +++ ++
Sbjct: 67 REIALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQL 125
Query: 258 -------VMVQILSVVAFCHFQGVVHRDLKPENFLFTSK-EENSSLKAIDFGLSDY---- 305
++ QIL + + H V+HRDLKP N L + E +K D G +
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 306 VKPDERLNDIVGSAYYVAPEVL--HRSYGTEADMWSIGVIAYILLCGSRPFWARTES 360
+KP L+ +V + +Y APE+L R Y D+W+IG I LL F R E
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 242
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R K+S
Sbjct: 52 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KFSL 108
Query: 253 EDAKIVM--VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L ++ + +K DFGLS Y++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDST 165
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 40/214 (18%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 48 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 104
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 161
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFR 364
D G+ + + APE L + + ++D+W+ GV+ W G+
Sbjct: 162 DTXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL----------LWEIATYGM-- 208
Query: 365 AVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYR 398
+P+P + P V LL KDYR
Sbjct: 209 -----------SPYPGIDPSQ---VYELLEKDYR 228
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 197 DVRREVKILRALT----GHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSE 252
D RE + ALT H ++V+ ++ ++I+MELC GEL + R K+S
Sbjct: 432 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR--KFSL 488
Query: 253 EDAKIVM--VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
+ A +++ Q+ + +A+ + VHRD+ N L ++ + +K DFGLS Y++
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDST 545
Query: 311 RLNDIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPF 354
G ++APE ++ R + + +D+W GV + IL+ G +PF
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 29/188 (15%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR--- 246
T + D+ E+++++ + HKN++ A D +Y+++E G L + + +R
Sbjct: 61 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 120
Query: 247 GGKY------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSS 294
G +Y S +D Q+ + + + +HRDL N L T E++
Sbjct: 121 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNV 177
Query: 295 LKAIDFGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-I 346
+K DFGL+ DY K + + ++APE L R Y ++D+WS GV+ + I
Sbjct: 178 MKIADFGLARDIHHIDYYK---KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
Query: 347 LLCGSRPF 354
G P+
Sbjct: 235 FTLGGSPY 242
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR---GGKY- 250
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R G +Y
Sbjct: 69 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 128
Query: 251 -----------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
S +D Q+ + + + +HRDL N L T E++ +K D
Sbjct: 129 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIAD 185
Query: 300 FGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGS 351
FGL+ DY K + + ++APE L R Y ++D+WS GV+ + I G
Sbjct: 186 FGLARDIHHIDYYK---KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 242
Query: 352 RPF 354
P+
Sbjct: 243 SPY 245
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR---GGKY- 250
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R G +Y
Sbjct: 118 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 177
Query: 251 -----------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
S +D Q+ + + + +HRDL N L T E++ +K D
Sbjct: 178 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIAD 234
Query: 300 FGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGS 351
FGL+ DY K + + ++APE L R Y ++D+WS GV+ + I G
Sbjct: 235 FGLARDIHHIDYYK---KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 291
Query: 352 RPF 354
P+
Sbjct: 292 SPY 294
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 29/188 (15%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR--- 246
T + D+ E+++++ + HKN++ A D +Y+++E G L + + +R
Sbjct: 57 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 116
Query: 247 GGKY------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSS 294
G +Y S +D Q+ + + + +HRDL N L T E++
Sbjct: 117 GLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNV 173
Query: 295 LKAIDFGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-I 346
+K DFGL+ DY K + + ++APE L R Y ++D+WS GV+ + I
Sbjct: 174 MKIADFGLARDIHHIDYYK---KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
Query: 347 LLCGSRPF 354
G P+
Sbjct: 231 FTLGGSPY 238
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR---GGKY- 250
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R G +Y
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 136
Query: 251 -----------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
S +D Q+ + + + +HRDL N L T E++ +K D
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIAD 193
Query: 300 FGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGS 351
FGL+ DY K + + ++APE L R Y ++D+WS GV+ + I G
Sbjct: 194 FGLARDIHHIDYYK---KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 352 RPF 354
P+
Sbjct: 251 SPY 253
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR---GGKY- 250
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R G +Y
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYS 136
Query: 251 -----------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
S +D Q+ + + + +HRDL N L T E++ +K D
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIAD 193
Query: 300 FGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGS 351
FGL+ DY K + + ++APE L R Y ++D+WS GV+ + I G
Sbjct: 194 FGLARDIHHIDYYK---KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 352 RPF 354
P+
Sbjct: 251 SPY 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR---GGKY- 250
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R G +Y
Sbjct: 70 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 129
Query: 251 -----------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
S +D Q+ + + + +HRDL N L T E++ +K D
Sbjct: 130 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIAD 186
Query: 300 FGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGS 351
FGL+ DY K + + ++APE L R Y ++D+WS GV+ + I G
Sbjct: 187 FGLARDIHHIDYYK---KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 243
Query: 352 RPF 354
P+
Sbjct: 244 SPY 246
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 95/244 (38%), Gaps = 39/244 (15%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G FG CS + K + VA+K L+V + + F
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKT---------LKVGYTEKQRRDFL--------- 71
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG 248
E I+ H N++ + IV E + G L + G
Sbjct: 72 -----------GEASIMGQFD-HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG 119
Query: 249 KYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
+++ ++ I + + + G VHRDL N L S N K DFGLS ++
Sbjct: 120 QFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 176
Query: 309 D-ERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGI 362
D E G + APE + R + + +D+WS G++ + ++ G RP+W T +
Sbjct: 177 DPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDV 236
Query: 363 FRAV 366
+AV
Sbjct: 237 IKAV 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR---GGKY- 250
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R G +Y
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 136
Query: 251 -----------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
S +D Q+ + + + +HRDL N L T E++ +K D
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIAD 193
Query: 300 FGLS------DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGS 351
FGL+ DY K + + ++APE L R Y ++D+WS GV+ + I G
Sbjct: 194 FGLARDIHHIDYYK---KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
Query: 352 RPF 354
P+
Sbjct: 251 SPY 253
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 105/264 (39%), Gaps = 48/264 (18%)
Query: 115 FSKQF-VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ V++ ++ E +G G FG C + K K VA+K
Sbjct: 7 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIK------------------ 48
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTG---HKNLVQFYDAYEDDDNIYIV 230
T+ Y E RRE ++ G H N+++ + + I+
Sbjct: 49 -----TLKGGYT----------ERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMIL 93
Query: 231 MELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE 290
E + G L + G+++ ++ I S + + VHRDL N L S
Sbjct: 94 TEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNS-- 151
Query: 291 ENSSLKAIDFGLSDYVK---PDERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVI 343
N K DFGLS +++ D +G + APE + R + + +D WS G++
Sbjct: 152 -NLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIV 210
Query: 344 AY-ILLCGSRPFWARTESGIFRAV 366
+ ++ G RP+W + + A+
Sbjct: 211 MWEVMSFGERPYWDMSNQDVINAI 234
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI++E G LLD + R
Sbjct: 51 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQ 107
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 108 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 164
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 165 DTXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 47/234 (20%)
Query: 127 EEVGRGHFGYTCSAKAKKGSLKGQ-DVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
+E+G G FG K G +GQ DVA+K+I +
Sbjct: 15 KELGTGQFGV-----VKYGKWRGQYDVAIKMIKE-------------------------- 43
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
+++ ++ E K++ L+ H+ LVQ Y I+I+ E G LL+ +
Sbjct: 44 -----GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 97
Query: 246 RGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDY 305
++ + + + + + + +HRDL N L + +K DFGLS Y
Sbjct: 98 MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRY 154
Query: 306 VKPDERLNDIVGSAY---YVAPEVLHRS-YGTEADMWSIGVIAY-ILLCGSRPF 354
V DE + GS + + PEVL S + +++D+W+ GV+ + I G P+
Sbjct: 155 VLDDEYTSS-RGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI++E G LLD + R
Sbjct: 55 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQ 111
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 112 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 168
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 169 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 105/264 (39%), Gaps = 48/264 (18%)
Query: 115 FSKQF-VAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKH 173
F+K+ V++ ++ E +G G FG C + K K VA+K
Sbjct: 9 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIK------------------ 50
Query: 174 ENHQFTILDEYCCLFMTTAIAIEDVRREVKILRALTG---HKNLVQFYDAYEDDDNIYIV 230
T+ Y E RRE ++ G H N+++ + + I+
Sbjct: 51 -----TLKGGYT----------ERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMIL 95
Query: 231 MELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE 290
E + G L + G+++ ++ I S + + VHRDL N L S
Sbjct: 96 TEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNS-- 153
Query: 291 ENSSLKAIDFGLSDYVK---PDERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVI 343
N K DFGLS +++ D +G + APE + R + + +D WS G++
Sbjct: 154 -NLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIV 212
Query: 344 AY-ILLCGSRPFWARTESGIFRAV 366
+ ++ G RP+W + + A+
Sbjct: 213 MWEVMSFGERPYWDMSNQDVINAI 236
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 109/281 (38%), Gaps = 66/281 (23%)
Query: 196 EDVRREVKILRALT----GHKNL-VQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-K 249
E R E+ +L + +KNL VQ +D ++ ++ I EL G D +
Sbjct: 75 EAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLP 133
Query: 250 YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE----------------ENS 293
Y + + Q+ V F H + H DLKPEN LF + + +++
Sbjct: 134 YPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 294 SLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSR 352
+++ +DFG + + E + IV + +Y APEV L + D+WSIG I + G
Sbjct: 194 AVRVVDFGSATF--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFT 251
Query: 353 PFW-------------------------ARTESGIFRAVLKADPSFDEAPWPS------- 380
F R + +R L D + +
Sbjct: 252 LFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLR 311
Query: 381 --LSPEA------IDFVKRLLNKDYRKRLTAAQALSHPWLA 413
L+ EA D ++ +L + KRLT +AL HP+ A
Sbjct: 312 RYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFA 352
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 55 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 111
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 112 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 168
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 169 DTXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 195 IEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSR-------- 246
+ D+ E+++++ + HKN++ A D +Y+++E G L + + +R
Sbjct: 77 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFS 136
Query: 247 -------GGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAID 299
+ S +D Q+ + + + +HRDL N L T E++ +K D
Sbjct: 137 FNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIAD 193
Query: 300 FGLS---DYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
FGL+ ++ ++ + ++APE L R Y ++D+WS GV+ + I G P+
Sbjct: 194 FGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 94/230 (40%), Gaps = 40/230 (17%)
Query: 126 GEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
G ++G G FG KG + VAVK + M+ +
Sbjct: 36 GNKMGEGGFGVV-----YKGYVNNTTVAVKKLAAMVDI---------------------- 68
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
TT + +E+K++ A H+NLV+ D D++ +V G LLDR+
Sbjct: 69 ----TTEELKQQFDQEIKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 246 RGGK--YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL- 302
G S + + + F H +HRD+K N L +E + K DFGL
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA 180
Query: 303 --SDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCG 350
S+ + IVG+ Y+APE L ++D++S GV+ ++ G
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 100/246 (40%), Gaps = 49/246 (19%)
Query: 121 AHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTI 180
HY++G +G G FG L Q VA+K P+
Sbjct: 9 VHYKVGRRIGEGSFGVIFEG---TNLLNNQQVAIKFEPR--------------------- 44
Query: 181 LDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELL 240
+ A + D R K+L TG N+ +Y E N+ ++ L G L
Sbjct: 45 --------RSDAPQLRDEYRTYKLLAGCTGIPNV--YYFGQEGLHNVLVIDLL--GPSLE 92
Query: 241 DRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLF---TSKEENSSLKA 297
D + G K+S + + Q+L+ V H + +V+RD+KP+NFL SK N +
Sbjct: 93 DLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN-MIYV 151
Query: 298 IDFGLSDYVK--------PDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILL 348
+DFG+ + + P ++ G+A Y++ L R D+ ++G + L
Sbjct: 152 VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL 211
Query: 349 CGSRPF 354
GS P+
Sbjct: 212 RGSLPW 217
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 55 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 111
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 112 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 168
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 169 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 52 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 108
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 109 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 165
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 166 D-TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 100/246 (40%), Gaps = 49/246 (19%)
Query: 121 AHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTI 180
HY++G +G G FG L Q VA+K P+
Sbjct: 10 VHYKVGRRIGEGSFGVIFEG---TNLLNNQQVAIKFEPR--------------------- 45
Query: 181 LDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELL 240
+ A + D R K+L TG N+ +Y E N+ ++ L G L
Sbjct: 46 --------RSDAPQLRDEYRTYKLLAGCTGIPNV--YYFGQEGLHNVLVIDLL--GPSLE 93
Query: 241 DRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLF---TSKEENSSLKA 297
D + G K+S + + Q+L+ V H + +V+RD+KP+NFL SK N +
Sbjct: 94 DLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN-MIYV 152
Query: 298 IDFGLSDYVK--------PDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILL 348
+DFG+ + + P ++ G+A Y++ L R D+ ++G + L
Sbjct: 153 VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL 212
Query: 349 CGSRPF 354
GS P+
Sbjct: 213 RGSLPW 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 54 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 110
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 111 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 167
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 168 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 51 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 107
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 108 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 164
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 165 D-TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 194 AIEDVRREVKILRALTGHKNL-----VQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG 248
A++ VR EV + L L V Y A + + I MEL +GG L +++ + G
Sbjct: 101 AVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMG 159
Query: 249 KYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E+ A + Q L + + H + ++H D+K +N L +S ++L DFG + ++P
Sbjct: 160 CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQP 217
Query: 309 DERLNDIV------GSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPF 354
D ++ G+ ++APE V+ + + D+WS + +L G P+
Sbjct: 218 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 50 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 106
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 107 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 163
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 164 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 50 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 106
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 107 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 163
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 164 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 194 AIEDVRREVKILRALTGHKNL-----VQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG 248
A++ VR EV + L L V Y A + + I MEL +GG L +++ + G
Sbjct: 87 AVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMG 145
Query: 249 KYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E+ A + Q L + + H + ++H D+K +N L +S ++L DFG + ++P
Sbjct: 146 CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQP 203
Query: 309 DERLNDIV------GSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPF 354
D ++ G+ ++APE V+ + + D+WS + +L G P+
Sbjct: 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 194 AIEDVRREVKILRALTGHKNL-----VQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG 248
A++ VR EV + L L V Y A + + I MEL +GG L +++ + G
Sbjct: 103 AVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMG 161
Query: 249 KYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E+ A + Q L + + H + ++H D+K +N L +S ++L DFG + ++P
Sbjct: 162 CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQP 219
Query: 309 DERLNDIV------GSAYYVAPE-VLHRSYGTEADMWSIGVIAYILLCGSRPF 354
D ++ G+ ++APE V+ + + D+WS + +L G P+
Sbjct: 220 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 55 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 111
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 112 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 168
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 169 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 52 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 108
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 109 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 165
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 166 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H N++ + I+ E + G L + G+++ ++ I + + +
Sbjct: 93 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAY-------YVA 323
VHRDL N L S N K DFGLS +++ D+ + SA + A
Sbjct: 153 DMNYVHRDLAARNILVNS---NLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTA 208
Query: 324 PEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAV 366
PE + +R + + +D+WS G++ + ++ G RP+W T + A+
Sbjct: 209 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 63 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 119
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 120 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 176
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 177 D-TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI++E G LLD + R
Sbjct: 50 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQ 106
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 163
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 164 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 52 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 108
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 109 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 165
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 166 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI++E G LLD + R
Sbjct: 50 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQ 106
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 163
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 164 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 40/230 (17%)
Query: 126 GEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
G ++G G FG KG + VAVK + M+ +
Sbjct: 36 GNKMGEGGFGVV-----YKGYVNNTTVAVKKLAAMVDI---------------------- 68
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
TT + +E+K++ A H+NLV+ D D++ +V G LLDR+
Sbjct: 69 ----TTEELKQQFDQEIKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 246 RGGK--YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL- 302
G S + + + F H +HRD+K N L +E + K DFGL
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA 180
Query: 303 --SDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCG 350
S+ IVG+ Y+APE L ++D++S GV+ ++ G
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 40/230 (17%)
Query: 126 GEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
G ++G G FG KG + VAVK + M+ +
Sbjct: 30 GNKMGEGGFGVV-----YKGYVNNTTVAVKKLAAMVDI---------------------- 62
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
TT + +E+K++ A H+NLV+ D D++ +V G LLDR+
Sbjct: 63 ----TTEELKQQFDQEIKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 117
Query: 246 RGGK--YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL- 302
G S + + + F H +HRD+K N L +E + K DFGL
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA 174
Query: 303 --SDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCG 350
S+ IVG+ Y+APE L ++D++S GV+ ++ G
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H N+++ + I+ E + G L + + G++S ++ I + + +
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA 164
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEV 326
VHRDL N L S N K DFGLS ++ D + APE
Sbjct: 165 NMNYVHRDLAARNILVNS---NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 327 L-HRSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAV 366
+ +R + + +D+WS G++ + ++ G RP+W + + +A+
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 55 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 111
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 112 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 168
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 169 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 50 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 106
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 163
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 164 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 50 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 106
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 107 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTG 163
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 164 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 296 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 352
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HR+L N L EN +K DFGLS +
Sbjct: 353 EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMTG 409
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 410 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H N+++ IV E + G L + + G+++ ++ + + + +
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVK--PDERLNDIVGSA--YYVAPEV 326
G VHRDL N L S N K DFGLS ++ PD G + APE
Sbjct: 169 DLGYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 327 L-HRSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAV 366
+ R++ + +D+WS GV+ + +L G RP+W T + +V
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 87/225 (38%), Gaps = 46/225 (20%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
+L + +G+G FG G +G VAVK I D
Sbjct: 196 KLLQTIGKGEFG-----DVMLGDYRGNKVAVKCIKN----------------------DA 228
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA-YEDDDNIYIVMELCKGGELLDR 242
F+ A + +R H NLVQ E+ +YIV E G L+D
Sbjct: 229 TAQAFLAEASVMTQLR-----------HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY 277
Query: 243 ILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
+ SRG D + + + + + VHRDL N L + E++ K DFG
Sbjct: 278 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFG 334
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY 345
L+ + + + APE L + + T++D+WS G++ +
Sbjct: 335 LTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLW 377
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H N+++ IV E + G L + + G+++ ++ + + + +
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVK--PDERLNDIVGSA--YYVAPEV 326
G VHRDL N L S N K DFGLS ++ PD G + APE
Sbjct: 169 DLGYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 327 L-HRSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAV 366
+ R++ + +D+WS GV+ + +L G RP+W T + +V
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 87/225 (38%), Gaps = 46/225 (20%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
+L + +G+G FG G +G VAVK I D
Sbjct: 9 KLLQTIGKGEFG-----DVMLGDYRGNKVAVKCIKN----------------------DA 41
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA-YEDDDNIYIVMELCKGGELLDR 242
F+ A + +R H NLVQ E+ +YIV E G L+D
Sbjct: 42 TAQAFLAEASVMTQLR-----------HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY 90
Query: 243 ILSRGGKYSEEDAKI-VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
+ SRG D + + + + + VHRDL N L + E++ K DFG
Sbjct: 91 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFG 147
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY 345
L+ + + + APE L + + T++D+WS G++ +
Sbjct: 148 LTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLW 190
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 254 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 310
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E +A +++ QI S + + + +HR+L N L EN +K DFGLS +
Sbjct: 311 EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMTG 367
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 368 D-TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 87/225 (38%), Gaps = 46/225 (20%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
+L + +G+G FG G +G VAVK I D
Sbjct: 15 KLLQTIGKGEFG-----DVMLGDYRGNKVAVKCIKN----------------------DA 47
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA-YEDDDNIYIVMELCKGGELLDR 242
F+ A + +R H NLVQ E+ +YIV E G L+D
Sbjct: 48 TAQAFLAEASVMTQLR-----------HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY 96
Query: 243 ILSRGGKYSEEDAKI-VMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
+ SRG D + + + + + VHRDL N L + E++ K DFG
Sbjct: 97 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFG 153
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVLHR-SYGTEADMWSIGVIAY 345
L+ + + + APE L ++ T++D+WS G++ +
Sbjct: 154 LTKEASSTQDTGKL--PVKWTAPEALREAAFSTKSDVWSFGILLW 196
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YIV E G LLD + R
Sbjct: 69 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNRE 125
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E A +++ QI S + + + +HRDL N L EN +K DFGLS +
Sbjct: 126 EVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHVVKVADFGLSRLMTG 182
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + ++ ++D+W+ GV+ + I G P+
Sbjct: 183 DTYTAH-AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 87/225 (38%), Gaps = 46/225 (20%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
+L + +G+G FG G +G VAVK I D
Sbjct: 24 KLLQTIGKGEFG-----DVMLGDYRGNKVAVKCIKN----------------------DA 56
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA-YEDDDNIYIVMELCKGGELLDR 242
F+ A + +R H NLVQ E+ +YIV E G L+D
Sbjct: 57 TAQAFLAEASVMTQLR-----------HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY 105
Query: 243 ILSRGGKYSEEDAKIVM-VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
+ SRG D + + + + + VHRDL N L + E++ K DFG
Sbjct: 106 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFG 162
Query: 302 LSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAY 345
L+ + + + APE L + + T++D+WS G++ +
Sbjct: 163 LTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLW 205
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 103/252 (40%), Gaps = 54/252 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
+ G+ +G G FG A A L +D +KV KM+ K H DE
Sbjct: 49 QFGKTLGAGAFGKVVEATA--FGLGKEDAVLKVAVKML----------KSTAHA----DE 92
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
E + E+KI+ L H+N+V A + ++ E C G+LL+
Sbjct: 93 K-----------EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN-F 140
Query: 244 LSRGGKYSEEDAKIVMV--------------QILSVVAFCHFQGVVHRDLKPENFLFTSK 289
L R + E D + Q+ +AF + +HRD+ N L T+
Sbjct: 141 LRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN- 199
Query: 290 EENSSLKAIDFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEADMWSIGVI 343
K DFGL+ + D N IV G+A ++APE + Y ++D+WS G++
Sbjct: 200 --GHVAKIGDFGLARDIMNDS--NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 344 AY-ILLCGSRPF 354
+ I G P+
Sbjct: 256 LWEIFSLGLNPY 267
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYS 251
+ +E+ +E +++ + H NLVQ + YI+ E G LLD + R
Sbjct: 257 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQ 313
Query: 252 EEDAKIVM---VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKP 308
E A +++ QI S + + + +HR+L N L EN +K DFGLS +
Sbjct: 314 EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMTG 370
Query: 309 DERLNDIVGSAY---YVAPEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPF 354
D G+ + + APE L + + ++D+W+ GV+ + I G P+
Sbjct: 371 DTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 102/252 (40%), Gaps = 54/252 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
+ G+ +G G FG A A L +D +KV KM+ K H
Sbjct: 49 QFGKTLGAGAFGKVVEATA--FGLGKEDAVLKVAVKML----------KSTAH------- 89
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
A E + E+KI+ L H+N+V A + ++ E C G+LL+
Sbjct: 90 --------ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN-F 140
Query: 244 LSRGGKYSEEDAKIVMV--------------QILSVVAFCHFQGVVHRDLKPENFLFTSK 289
L R + E D + Q+ +AF + +HRD+ N L T+
Sbjct: 141 LRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN- 199
Query: 290 EENSSLKAIDFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEADMWSIGVI 343
K DFGL+ + D N IV G+A ++APE + Y ++D+WS G++
Sbjct: 200 --GHVAKIGDFGLARDIMNDS--NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 344 AY-ILLCGSRPF 354
+ I G P+
Sbjct: 256 LWEIFSLGLNPY 267
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 91/230 (39%), Gaps = 40/230 (17%)
Query: 126 GEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYC 185
G + G G FG KG + VAVK + M+ +
Sbjct: 27 GNKXGEGGFGVV-----YKGYVNNTTVAVKKLAAMVDI---------------------- 59
Query: 186 CLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS 245
TT + +E+K+ A H+NLV+ D D++ +V G LLDR+
Sbjct: 60 ----TTEELKQQFDQEIKV-XAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSC 114
Query: 246 RGGK--YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL- 302
G S + + + F H +HRD+K N L +E + K DFGL
Sbjct: 115 LDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA 171
Query: 303 --SDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCG 350
S+ + IVG+ Y APE L ++D++S GV+ ++ G
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD------RILSRGGK 249
++ REV L H ++V+++ A+ +DD++ I E C GG L D RI+S
Sbjct: 55 QNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMS---Y 111
Query: 250 YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFT-----------SKEENSSLKAI 298
+ E + K +++Q+ + + H +VH D+KP N + E++ + +
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171
Query: 299 DFGLSD--YVKPDERLNDIVGSAYYVAPEVLHRSYG--TEADMWSIGVIAYILLCGSRPF 354
F + D +V G + ++A EVL +Y +AD++++ + + G+ P
Sbjct: 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPL 230
Query: 355 ------WARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALS 408
W G + + LS E + +K +++ D +R +A +
Sbjct: 231 PRNGDQWHEIRQGRLPRIPQV-----------LSQEFTELLKVMIHPDPERRPSAMALVK 279
Query: 409 HPWLANS 415
H L ++
Sbjct: 280 HSVLLSA 286
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 110/254 (43%), Gaps = 42/254 (16%)
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD------R 242
+ ++ ++ REV L H ++V+++ A+ +DD++ I E C GG L D R
Sbjct: 46 LAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYR 105
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFT-----------SKEE 291
I+S + E + K +++Q+ + + H +VH D+KP N + E+
Sbjct: 106 IMS---YFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDED 162
Query: 292 NSSLKAIDFGLSD--YVKPDERLNDIVGSAYYVAPEVLHRSYG--TEADMWSIGVIAYIL 347
+ + + F + D +V G + ++A EVL +Y +AD++++ + +
Sbjct: 163 DWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVC 221
Query: 348 LCGSRPF------WARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRL 401
G+ P W G + + LS E + +K +++ D +R
Sbjct: 222 AAGAEPLPRNGDQWHEIRQGRLPRIPQV-----------LSQEFTELLKVMIHPDPERRP 270
Query: 402 TAAQALSHPWLANS 415
+A + H L ++
Sbjct: 271 SAMALVKHSVLLSA 284
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD------RILSRGGK 249
++ REV L H ++V+++ A+ +DD++ I E C GG L D RI+S
Sbjct: 53 QNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMS---Y 109
Query: 250 YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFT-----------SKEENSSLKAI 298
+ E + K +++Q+ + + H +VH D+KP N + E++ + +
Sbjct: 110 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 169
Query: 299 DFGLSD--YVKPDERLNDIVGSAYYVAPEVLHRSYG--TEADMWSIGVIAYILLCGSRPF 354
F + D +V G + ++A EVL +Y +AD++++ + + G+ P
Sbjct: 170 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPL 228
Query: 355 ------WARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALS 408
W G + + LS E + +K +++ D +R +A +
Sbjct: 229 PRNGDQWHEIRQGRLPRIPQV-----------LSQEFTELLKVMIHPDPERRPSAMALVK 277
Query: 409 HPWLANS 415
H L ++
Sbjct: 278 HSVLLSA 284
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLD------RILSRGGK 249
++ REV L H ++V+++ A+ +DD++ I E C GG L D RI+S
Sbjct: 51 QNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMS---Y 107
Query: 250 YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFT-----------SKEENSSLKAI 298
+ E + K +++Q+ + + H +VH D+KP N + E++ + +
Sbjct: 108 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 167
Query: 299 DFGLSD--YVKPDERLNDIVGSAYYVAPEVLHRSYG--TEADMWSIGVIAYILLCGSRPF 354
F + D +V G + ++A EVL +Y +AD++++ + + G+ P
Sbjct: 168 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVXAAGAEPL 226
Query: 355 ------WARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALS 408
W G + + LS E + +K +++ D +R +A +
Sbjct: 227 PRNGDQWHEIRQGRLPRIPQV-----------LSQEFTELLKVMIHPDPERRPSAMALVK 275
Query: 409 HPWLANS 415
H L ++
Sbjct: 276 HSVLLSA 282
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 37/237 (15%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY--SEE 253
E + E+K+L L H N+V A ++ E C G+LL+ + + + S+
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 254 DAKIVMV---------------QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
I+ Q+ +AF + +HRDL N L T K
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKIC 210
Query: 299 DFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEADMWSIGVIAYILLC-GS 351
DFGL+ ++K D N +V G+A ++APE + + Y E+D+WS G+ + L GS
Sbjct: 211 DFGLARHIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 352 RPFWARTESGIFRAVLKAD---PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQ 405
P+ F ++K S + AP E D +K + D KR T Q
Sbjct: 269 SPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQ 320
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
A++D REV + +L H+NL++ Y + +V EL G LLDR+ G +
Sbjct: 58 AMDDFIREVNAMHSLD-HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLG 115
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL--------SDY 305
VQ+ + + + +HRDL N L +++ +K DFGL Y
Sbjct: 116 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQNDDHY 172
Query: 306 VKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLC-GSRPFWARTESGIF 363
V + R + APE L R++ +D W GV + + G P+ S I
Sbjct: 173 VMQEHRKVPFA----WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 228
Query: 364 RAVLKADPSFDEAPWPSLSPEAI 386
K D + P P P+ I
Sbjct: 229 H---KIDKEGERLPRPEDCPQDI 248
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
A++D REV + +L H+NL++ Y + +V EL G LLDR+ G +
Sbjct: 64 AMDDFIREVNAMHSLD-HRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLG 121
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL--------SDY 305
VQ+ + + + +HRDL N L +++ +K DFGL Y
Sbjct: 122 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQNDDHY 178
Query: 306 VKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLC-GSRPFWARTESGIF 363
V + R + APE L R++ +D W GV + + G P+ S I
Sbjct: 179 VMQEHRKVPFA----WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 234
Query: 364 RAVLKADPSFDEAPWPSLSPEAI 386
K D + P P P+ I
Sbjct: 235 H---KIDKEGERLPRPEDCPQDI 254
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
A++D REV + +L H+NL++ Y + +V EL G LLDR+ G +
Sbjct: 58 AMDDFIREVNAMHSLD-HRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLG 115
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL--------SDY 305
VQ+ + + + +HRDL N L +++ +K DFGL Y
Sbjct: 116 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQNDDHY 172
Query: 306 VKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLC-GSRPFWARTESGIF 363
V + R + APE L R++ +D W GV + + G P+ S I
Sbjct: 173 VMQEHRKVPFA----WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 228
Query: 364 RAVLKADPSFDEAPWPSLSPEAI 386
K D + P P P+ I
Sbjct: 229 H---KIDKEGERLPRPEDCPQDI 248
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 48/247 (19%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
+ G+ +G G FG A A L +D +KV KM+ K H DE
Sbjct: 41 QFGKTLGAGAFGKVVEATAF--GLGKEDAVLKVAVKML----------KSTAHA----DE 84
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
E + E+KI+ L H+N+V A + ++ E C G+LL+ +
Sbjct: 85 K-----------EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 133
Query: 244 LSRG-GKYSEEDAKIVMV--------QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSS 294
+ +ED + + + Q+ +AF + +HRD+ N L T+
Sbjct: 134 RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN---GHV 190
Query: 295 LKAIDFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEADMWSIGVIAY-IL 347
K DFGL+ + D N IV G+A ++APE + Y ++D+WS G++ + I
Sbjct: 191 AKIGDFGLARDIMNDS--NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 248
Query: 348 LCGSRPF 354
G P+
Sbjct: 249 SLGLNPY 255
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
A++D REV + +L H+NL++ Y + +V EL G LLDR+ G +
Sbjct: 54 AMDDFIREVNAMHSLD-HRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL--------SDY 305
VQ+ + + + +HRDL N L +++ +K DFGL Y
Sbjct: 112 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQNDDHY 168
Query: 306 VKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLC-GSRPFWARTESGIF 363
V + R + APE L R++ +D W GV + + G P+ S I
Sbjct: 169 VMQEHRKVPFA----WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
Query: 364 RAVLKADPSFDEAPWPSLSPEAI 386
K D + P P P+ I
Sbjct: 225 H---KIDKEGERLPRPEDCPQDI 244
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
A++D REV + +L H+NL++ Y + +V EL G LLDR+ G +
Sbjct: 54 AMDDFIREVNAMHSLD-HRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL--------SDY 305
VQ+ + + + +HRDL N L +++ +K DFGL Y
Sbjct: 112 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQNDDHY 168
Query: 306 VKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLC-GSRPFWARTESGIF 363
V + R + APE L R++ +D W GV + + G P+ S I
Sbjct: 169 VMQEHRKVPFA----WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
Query: 364 RAVLKADPSFDEAPWPSLSPEAI 386
K D + P P P+ I
Sbjct: 225 H---KIDKEGERLPRPEDCPQDI 244
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 48/247 (19%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
+ G+ +G G FG A A L +D +KV KM+ K H
Sbjct: 49 QFGKTLGAGAFGKVVEATA--FGLGKEDAVLKVAVKML----------KSTAH------- 89
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
A E + E+KI+ L H+N+V A + ++ E C G+LL+ +
Sbjct: 90 --------ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
Query: 244 LSRG-GKYSEEDAKIVMV--------QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSS 294
+ +ED + + + Q+ +AF + +HRD+ N L T+
Sbjct: 142 RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN---GHV 198
Query: 295 LKAIDFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEADMWSIGVIAY-IL 347
K DFGL+ + D N IV G+A ++APE + Y ++D+WS G++ + I
Sbjct: 199 AKIGDFGLARDIMNDS--NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 256
Query: 348 LCGSRPF 354
G P+
Sbjct: 257 SLGLNPY 263
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS-RGGKY 250
++++E E +++ L H LV+ + A + IYI+ E G LLD + S G K
Sbjct: 51 SMSVEAFLAEANVMKTLQ-HDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ 108
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
QI +AF + +HRDL+ N L ++ + K DFGL+ ++ D
Sbjct: 109 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGLARVIE-DN 164
Query: 311 RLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRA 365
G+ + + APE ++ S+ ++D+WS G++ I+ G P+ + + RA
Sbjct: 165 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 224
Query: 366 V 366
+
Sbjct: 225 L 225
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 80/210 (38%), Gaps = 59/210 (28%)
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKE----------------ENSSLKAIDFGLSD 304
Q+ + F H + H DLKPEN LF + E +N+S++ DFG +
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 222
Query: 305 YVKPDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPFWA---RTES 360
+ E IV + +Y PEV L + D+WSIG I + G F R
Sbjct: 223 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 361 GIFRAVLKADPS------------------FDE------------APWPSL-------SP 383
+ +L PS +DE P S
Sbjct: 281 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 340
Query: 384 EAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+ D ++R+L D +R+T A+AL HP+ A
Sbjct: 341 QLFDLMRRMLEFDPAQRITLAEALLHPFFA 370
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 64 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAK 177
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 178 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H N++ + I+ E + G L + G+++ ++ I + + +
Sbjct: 67 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAY-------YVA 323
VHR L N L S N K DFGLS +++ D+ + SA + A
Sbjct: 127 DMNYVHRALAARNILVNS---NLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTA 182
Query: 324 PEVL-HRSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAV 366
PE + +R + + +D+WS G++ + ++ G RP+W T + A+
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 227
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 80/210 (38%), Gaps = 59/210 (28%)
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKE----------------ENSSLKAIDFGLSD 304
Q+ + F H + H DLKPEN LF + E +N+S++ DFG +
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 199
Query: 305 YVKPDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPFWA---RTES 360
+ E IV + +Y PEV L + D+WSIG I + G F R
Sbjct: 200 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 361 GIFRAVLKADPS------------------FDE------------APWPSL-------SP 383
+ +L PS +DE P S
Sbjct: 258 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 317
Query: 384 EAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+ D ++R+L D +R+T A+AL HP+ A
Sbjct: 318 QLFDLMRRMLEFDPAQRITLAEALLHPFFA 347
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 80/210 (38%), Gaps = 59/210 (28%)
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKE----------------ENSSLKAIDFGLSD 304
Q+ + F H + H DLKPEN LF + E +N+S++ DFG +
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190
Query: 305 YVKPDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPFWA---RTES 360
+ E IV + +Y PEV L + D+WSIG I + G F R
Sbjct: 191 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 361 GIFRAVLKADPS------------------FDE------------APWPSL-------SP 383
+ +L PS +DE P S
Sbjct: 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 308
Query: 384 EAIDFVKRLLNKDYRKRLTAAQALSHPWLA 413
+ D ++R+L D +R+T A+AL HP+ A
Sbjct: 309 QLFDLMRRMLEFDPAQRITLAEALLHPFFA 338
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 66 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 123
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 124 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAK 179
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 180 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 68 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 125
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 126 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAK 181
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 182 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 67 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 124
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 125 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAK 180
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 181 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
A++D REV + +L H+NL++ Y + +V EL G LLDR+ G +
Sbjct: 64 AMDDFIREVNAMHSLD-HRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLG 121
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
VQ+ + + + +HRDL N L +++ +K DFGL + ++ +
Sbjct: 122 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQND--D 176
Query: 314 DIVGSAY------YVAPEVLH-RSYGTEADMWSIGVIAYILLC-GSRPFWARTESGIFRA 365
V + + APE L R++ +D W GV + + G P+ S I
Sbjct: 177 HXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH- 235
Query: 366 VLKADPSFDEAPWPSLSPEAI 386
K D + P P P+ I
Sbjct: 236 --KIDKEGERLPRPEDCPQDI 254
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 114/286 (39%), Gaps = 56/286 (19%)
Query: 90 GSVKPNEASIPEGNESDIGLDKNFGFSKQFVAHYELGEEVGRGHFGYTCSAKA--KKGSL 147
GS+ P+E + E E + F + +LG+ +GRG FG A A +
Sbjct: 1 GSMDPDELPLDEHCERLPYDASKWEFPRD---RLKLGKPLGRGAFGQVIEADAFGIDKTA 57
Query: 148 KGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRA 207
+ VAVK++ + H H+ + E+KIL
Sbjct: 58 TXRTVAVKMLKE----------GATHSEHRALM-------------------SELKILIH 88
Query: 208 LTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELLDRILSRGGK---YSEEDAKIVMV--- 260
+ H N+V A + +++E CK G L + S+ + Y ED +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 261 -------QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE--- 310
Q+ + F + +HRDL N L + E + +K DFGL+ + D
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXV 205
Query: 311 RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAY-ILLCGSRPF 354
R D ++APE + R Y ++D+WS GV+ + I G+ P+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 51/249 (20%)
Query: 125 LGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE----------GATHSEHRALM-- 78
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDA-YEDDDNIYIVMELCKGGELLD 241
E+KIL + H N+V A + + +++E CK G L
Sbjct: 79 -----------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 121
Query: 242 RILSRGGKY-----------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE 290
+ S+ ++ + E Q+ + F + +HRDL N L +
Sbjct: 122 YLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS--- 178
Query: 291 ENSSLKAIDFGLSD--YVKPDE-RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAY- 345
E + +K DFGL+ Y PD R D ++APE + R Y ++D+WS GV+ +
Sbjct: 179 EKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 346 ILLCGSRPF 354
I G+ P+
Sbjct: 239 IFSLGASPY 247
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 192 AIAIEDVRR-------EVKILRALTGHKNL--VQFYDAYEDDDNIYIVMELCKGGELLDR 242
AI +E+V+ E KI R L G + V+++ E D N+ ++ L E L
Sbjct: 36 AIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWF-GVEGDYNVLVMDLLGPSLEDLFN 94
Query: 243 ILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
SR K S + ++ Q+++ V F H + +HRD+KP+NFL + + IDFGL
Sbjct: 95 FCSR--KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152
Query: 303 SDYVK--------PDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRP 353
+ + P ++ G+A Y + L D+ S+G + L GS P
Sbjct: 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212
Query: 354 FWARTESG 361
W ++G
Sbjct: 213 -WQGLKAG 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
A++D REV + +L H+NL++ Y + +V EL G LLDR+ G +
Sbjct: 54 AMDDFIREVNAMHSLD-HRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
VQ+ + + + +HRDL N L +++ +K DFGL + ++ +
Sbjct: 112 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQND--D 166
Query: 314 DIVGSAY------YVAPEVLH-RSYGTEADMWSIGVIAYILLC-GSRPFWARTESGIFRA 365
V + + APE L R++ +D W GV + + G P+ S I
Sbjct: 167 HXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH- 225
Query: 366 VLKADPSFDEAPWPSLSPEAI 386
K D + P P P+ I
Sbjct: 226 --KIDKEGERLPRPEDCPQDI 244
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 101/249 (40%), Gaps = 51/249 (20%)
Query: 125 LGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE----------GATHSEHRALM-- 78
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELLD 241
E+KIL + H N+V A + +++E CK G L
Sbjct: 79 -----------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 121
Query: 242 RILSRGGKY-----------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKE 290
+ S+ ++ + E Q+ + F + +HRDL N L +
Sbjct: 122 YLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLS--- 178
Query: 291 ENSSLKAIDFGLSD--YVKPDE-RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAY- 345
E + +K DFGL+ Y PD R D ++APE + R Y ++D+WS GV+ +
Sbjct: 179 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 346 ILLCGSRPF 354
I G+ P+
Sbjct: 239 IFSLGASPY 247
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 58 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DAEXTAREGAK 171
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 172 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 64 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAK 177
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 178 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 58 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAK 171
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 172 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D + +
Sbjct: 53 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQA 109
Query: 246 RGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDY 305
+ QI + + + +HRDL N L E + +K DFGL+
Sbjct: 110 HAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTKV 166
Query: 306 VKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
+ D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 167 LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 63 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 120
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 121 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAK 176
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 177 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS-RGGKY 250
++++E E +++ L H LV+ + A + IYI+ E G LLD + S G K
Sbjct: 224 SMSVEAFLAEANVMKTLQ-HDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ 281
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
QI +AF + +HRDL+ N L ++ + K DFGL+ ++ D
Sbjct: 282 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGLARVIE-DN 337
Query: 311 RLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRA 365
G+ + + APE ++ S+ ++D+WS G++ I+ G P+ + + RA
Sbjct: 338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 397
Query: 366 V 366
+
Sbjct: 398 L 398
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 60 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 117
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 118 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAK 173
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 174 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H N++ + I+ E + G L + G+++ ++ I S + +
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 148
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEV 326
VHRDL N L S N K DFG+S ++ D E G + APE
Sbjct: 149 DMSAVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 327 L-HRSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAV 366
+ +R + + +D+WS G++ + ++ G RP+W + + +A+
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 50 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 104
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 105 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 159
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 50 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 104
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 105 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 159
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 48 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 102
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 103 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 157
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 209
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 37/237 (15%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY--SEE 253
E + E+K+L L H N+V A ++ E C G+LL+ + + + S+
Sbjct: 87 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 146
Query: 254 DAKIVMV---------------QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
I+ Q+ +AF + +HRDL N L T K
Sbjct: 147 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKIC 203
Query: 299 DFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEADMWSIGVIAYILLC-GS 351
DFGL+ +K D N +V G+A ++APE + + Y E+D+WS G+ + L GS
Sbjct: 204 DFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 261
Query: 352 RPFWARTESGIFRAVLKAD---PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQ 405
P+ F ++K S + AP E D +K + D KR T Q
Sbjct: 262 SPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQ 313
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 81 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 135
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 136 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 190
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 59 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 116
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 117 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAK 172
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 173 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 68 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 122
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 123 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 177
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 68 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 122
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 123 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 177
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 58 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAK 171
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 172 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E E +I++ L H LVQ Y A ++ IYIV E G LLD + G+ +
Sbjct: 49 ESFLEEAQIMKKLK-HDKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPN 106
Query: 256 KIVMV-QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLND 314
+ M Q+ + +A+ +HRDL+ N L + K DFGL+ ++ D
Sbjct: 107 LVDMAAQVAAGMAYIERMNYIHRDLRSANILVGN---GLICKIADFGLARLIE-DNEXTA 162
Query: 315 IVGSAY---YVAPE-VLHRSYGTEADMWSIGVIAYILLCGSR 352
G+ + + APE L+ + ++D+WS G++ L+ R
Sbjct: 163 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 49 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 103
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 104 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 158
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 50 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 104
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 105 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 159
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 39/181 (21%)
Query: 199 RREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIV 258
+REV R T H+N+V F A ++ I+ LCKG L + DAKIV
Sbjct: 77 KREVMAYRQ-TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV---------RDAKIV 126
Query: 259 M---------VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYV--- 306
+ +I+ + + H +G++H+DLK +N + +N + DFGL
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVL 182
Query: 307 ---KPDERLNDIVGSAYYVAPEVLHR----------SYGTEADMWSIGVIAYILLCGSRP 353
+ +++L G ++APE++ + + +D++++G I Y L P
Sbjct: 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
Query: 354 F 354
F
Sbjct: 243 F 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 57 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 111
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 112 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 166
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 55 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 109
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 110 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 164
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 216
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 37/237 (15%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY--SEE 253
E + E+K+L L H N+V A ++ E C G+LL+ + + + S+
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 254 DAKIVMV---------------QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
I+ Q+ +AF + +HRDL N L T K
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKIC 210
Query: 299 DFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEADMWSIGVIAYILLC-GS 351
DFGL+ +K D N +V G+A ++APE + + Y E+D+WS G+ + L GS
Sbjct: 211 DFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 352 RPFWARTESGIFRAVLKAD---PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQ 405
P+ F ++K S + AP E D +K + D KR T Q
Sbjct: 269 SPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQ 320
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 53 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 107
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 108 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 162
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 128 EVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHC-PKHENHQFTILDEYCC 186
++G GHFG K SL D +M+ V L+ C P+H +
Sbjct: 21 DLGEGHFG--------KVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS----------- 61
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYED--DDNIYIVMELCKGGELLDRIL 244
++E+ ILR L H++++++ ED + ++ +VME G L D +
Sbjct: 62 ----------GWKQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL- 109
Query: 245 SRGGKYSEEDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
++S A++++ QI +A+ H Q +HR+L N L + + +K DFGL
Sbjct: 110 ---PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLL---DNDRLVKIGDFGL 163
Query: 303 SDYVKPDERL----NDIVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILL 348
+ V D ++ APE L + +D+WS GV Y LL
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 37/237 (15%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY--SEE 253
E + E+K+L L H N+V A ++ E C G+LL+ + + + S+
Sbjct: 89 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 148
Query: 254 DAKIVMV---------------QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
I+ Q+ +AF + +HRDL N L T K
Sbjct: 149 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKIC 205
Query: 299 DFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEADMWSIGVIAYILL-CGS 351
DFGL+ +K D N +V G+A ++APE + + Y E+D+WS G+ + L GS
Sbjct: 206 DFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 263
Query: 352 RPFWARTESGIFRAVLKAD---PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQ 405
P+ F ++K S + AP E D +K + D KR T Q
Sbjct: 264 SPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQ 315
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 56 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 110
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 111 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 165
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 217
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 128 EVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHC-PKHENHQFTILDEYCC 186
++G GHFG K SL D +M+ V L+ C P+H +
Sbjct: 21 DLGEGHFG--------KVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS----------- 61
Query: 187 LFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYED--DDNIYIVMELCKGGELLDRIL 244
++E+ ILR L H++++++ ED + ++ +VME G L D +
Sbjct: 62 ----------GWKQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL- 109
Query: 245 SRGGKYSEEDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGL 302
++S A++++ QI +A+ H Q +HR+L N L + + +K DFGL
Sbjct: 110 ---PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLL---DNDRLVKIGDFGL 163
Query: 303 SDYVKPDERL----NDIVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILL 348
+ V D ++ APE L + +D+WS GV Y LL
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 54 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 108
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 109 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 163
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 215
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 58 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAK 171
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 172 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 37/237 (15%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKY--SEE 253
E + E+K+L L H N+V A ++ E C G+LL+ + + + S+
Sbjct: 71 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 130
Query: 254 DAKIVMV---------------QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI 298
I+ Q+ +AF + +HRDL N L T K
Sbjct: 131 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKIC 187
Query: 299 DFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEADMWSIGVIAYILL-CGS 351
DFGL+ +K D N +V G+A ++APE + + Y E+D+WS G+ + L GS
Sbjct: 188 DFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 352 RPFWARTESGIFRAVLKAD---PSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQ 405
P+ F ++K S + AP E D +K + D KR T Q
Sbjct: 246 SPYPGMPVDSKFYKMIKEGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQ 297
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 53 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 110
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HRDL+ N L + + S K DFGL+ ++ D G+
Sbjct: 111 AQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAK 166
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 167 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 55/254 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----------THSEHRALM- 78
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELL 240
E+KIL + H N+V A + +++E CK G L
Sbjct: 79 ------------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 241 DRILSRGGKY---------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ S+ ++ + E Q+ + F + +HRDL N L
Sbjct: 121 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Query: 286 FTSKEENSSLKAIDFGLSD--YVKPDE-RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIG 341
+ E + +K DFGL+ Y PD R D ++APE + R Y ++D+WS G
Sbjct: 181 LS---EKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 342 VIAY-ILLCGSRPF 354
V+ + I G+ P+
Sbjct: 238 VLLWEIFSLGASPY 251
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H N++ + I+ E + G L + G+++ ++ I S + +
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEV 326
VHRDL N L S N K DFG+S ++ D E G + APE
Sbjct: 134 DMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 327 L-HRSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAV 366
+ +R + + +D+WS G++ + ++ G RP+W + + +A+
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Query: 211 HKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
H N++ + I+ E + G L + G+++ ++ I S + +
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPD-ERLNDIVGSAY---YVAPEV 326
VHRDL N L S N K DFG+S ++ D E G + APE
Sbjct: 128 DMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 327 L-HRSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAV 366
+ +R + + +D+WS G++ + ++ G RP+W + + +A+
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 45/192 (23%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
A +D +RE ++L L H+++V+F+ + + +V E + G+L +R L G
Sbjct: 86 ARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGP---- 139
Query: 254 DAKIV------------MVQILSV----------VAFCHFQGVVHRDLKPENFLFTSKEE 291
DAK++ + Q+L+V +A HF VHRDL N L +
Sbjct: 140 DAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVG---Q 193
Query: 292 NSSLKAIDFGLS------DYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIA 344
+K DFG+S DY + R + ++ PE +L+R + TE+D+WS GV+
Sbjct: 194 GLVVKIGDFGMSRDIYSTDYYRVGGR---TMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 345 Y-ILLCGSRPFW 355
+ I G +P++
Sbjct: 251 WEIFTYGKQPWY 262
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 18/223 (8%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED----DDNIYIVMELCKGGELLDRILSRGGKYSEED 254
+ E + L+ L H N+V+FYD++E I +V EL G L L R +
Sbjct: 73 KEEAEXLKGLQ-HPNIVRFYDSWESTVKGKKCIVLVTELXTSG-TLKTYLKRFKVXKIKV 130
Query: 255 AKIVMVQILSVVAFCHFQG--VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERL 312
+ QIL + F H + ++HRDLK +N T S+K D GL+ +K
Sbjct: 131 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP--TGSVKIGDLGLAT-LKRASFA 187
Query: 313 NDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPF-WARTESGIFRAVLKA-- 369
++G+ + APE Y D+++ G P+ + + I+R V
Sbjct: 188 KAVIGTPEFXAPEXYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVK 247
Query: 370 DPSFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAAQALSHPWL 412
SFD+ PE + ++ + ++ +R + L+H +
Sbjct: 248 PASFDKVA----IPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 112/277 (40%), Gaps = 59/277 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
+ G+ +G G FG A A L +D +KV KM+ K H
Sbjct: 49 QFGKTLGAGAFGKVVEATA--FGLGKEDAVLKVAVKML----------KSTAH------- 89
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
A E + E+KI+ L H+N+V A + ++ E C G+LL+ +
Sbjct: 90 --------ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
Query: 244 LSR---GGKY------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS 288
+ G +Y S D Q+ +AF + +HRD+ N L T+
Sbjct: 142 RRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 201
Query: 289 KEENSSLKAIDFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEADMWSIGV 342
K DFGL+ + D N IV G+A ++APE + Y ++D+WS G+
Sbjct: 202 ---GHVAKIGDFGLARDIMNDS--NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 256
Query: 343 IAY-ILLCGSRPFWARTESGIFRAVLK-----ADPSF 373
+ + I G P+ + F ++K A P+F
Sbjct: 257 LLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 293
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E E I++ L H ++V+ E++ +I+MEL GEL L R K S +
Sbjct: 70 EKFMSEAVIMKNL-DHPHIVKLIGIIEEEPT-WIIMELYPYGEL-GHYLERN-KNSLKVL 125
Query: 256 KIVM--VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+V+ +QI +A+ VHRD+ N L S E +K DFGLS Y++ ++
Sbjct: 126 TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKLGDFGLSRYIEDEDYYK 182
Query: 314 DIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAVLKA 369
V +++PE ++ R + T +D+W V + IL G +PF+ + + K
Sbjct: 183 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 242
Query: 370 DPSFDEAPWPSLSPEAI 386
D P P L P +
Sbjct: 243 ----DRLPKPDLCPPVL 255
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 51/233 (21%)
Query: 128 EVGRGHFGYT---CSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEY 184
++G GHFG C G+ G+ VAVK + G P+H +
Sbjct: 38 DLGEGHFGKVSLYCYDPTNDGT--GEMVAVKALKADAG--------PQHRS--------- 78
Query: 185 CCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDD--NIYIVMELCKGGELLDR 242
++E+ ILR L H++++++ ED ++ +VME G L D
Sbjct: 79 ------------GWKQEIDILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY 125
Query: 243 ILSRGGKYSEEDAKIVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDF 300
+ ++S A++++ QI +A+ H Q +HRDL N L + + +K DF
Sbjct: 126 L----PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDF 178
Query: 301 GLSDYVKPDERL----NDIVGSAYYVAPEVLHR-SYGTEADMWSIGVIAYILL 348
GL+ V D ++ APE L + +D+WS GV Y LL
Sbjct: 179 GLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 58/288 (20%)
Query: 90 GSVKPNEASIPEGNESDIGLDKNFGFSKQFVAHYELGEEVGRGHFGYTCSAKA--KKGSL 147
G++ P+E + E E + F + +LG+ +GRG FG A A +
Sbjct: 1 GAMDPDELPLDEHCERLPYDASKWEFPRD---RLKLGKPLGRGAFGQVIEADAFGIDKTA 57
Query: 148 KGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLFMTTAIAIEDVRREVKILRA 207
+ VAVK++ + H H+ + E+KIL
Sbjct: 58 TCRTVAVKMLKEGA----------THSEHRALM-------------------SELKILIH 88
Query: 208 LTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELLDRILSRGGKY---------------S 251
+ H N+V A + +++E CK G L + S+ ++ +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 252 EEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD--YVKPD 309
E Q+ + F + +HRDL N L + E + +K DFGL+ Y PD
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 205
Query: 310 E-RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAY-ILLCGSRPF 354
R D ++APE + R Y ++D+WS GV+ + I G+ P+
Sbjct: 206 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E E I++ L H ++V+ E++ +I+MEL GEL L R K S +
Sbjct: 58 EKFMSEAVIMKNL-DHPHIVKLIGIIEEEPT-WIIMELYPYGEL-GHYLERN-KNSLKVL 113
Query: 256 KIVM--VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+V+ +QI +A+ VHRD+ N L S E +K DFGLS Y++ ++
Sbjct: 114 TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKLGDFGLSRYIEDEDYYK 170
Query: 314 DIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAVLKA 369
V +++PE ++ R + T +D+W V + IL G +PF+ + + K
Sbjct: 171 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 230
Query: 370 DPSFDEAPWPSLSPEAI 386
D P P L P +
Sbjct: 231 ----DRLPKPDLCPPVL 243
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 196 EDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDA 255
E E I++ L H ++V+ E++ +I+MEL GEL L R K S +
Sbjct: 54 EKFMSEAVIMKNL-DHPHIVKLIGIIEEEPT-WIIMELYPYGEL-GHYLERN-KNSLKVL 109
Query: 256 KIVM--VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+V+ +QI +A+ VHRD+ N L S E +K DFGLS Y++ ++
Sbjct: 110 TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE---CVKLGDFGLSRYIEDEDYYK 166
Query: 314 DIVGS--AYYVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRAVLKA 369
V +++PE ++ R + T +D+W V + IL G +PF+ + + K
Sbjct: 167 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 226
Query: 370 DPSFDEAPWPSLSPEAI 386
D P P L P +
Sbjct: 227 ----DRLPKPDLCPPVL 239
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 55/254 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----------THSEHRALM- 78
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELL 240
E+KIL + H N+V A + +++E CK G L
Sbjct: 79 ------------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 241 DRILSRGGKY---------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ S+ ++ + E Q+ + F + +HRDL N L
Sbjct: 121 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Query: 286 FTSKEENSSLKAIDFGLSD--YVKPDE-RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIG 341
+ E + +K DFGL+ Y PD R D ++APE + R Y ++D+WS G
Sbjct: 181 LS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 342 VIAY-ILLCGSRPF 354
V+ + I G+ P+
Sbjct: 238 VLLWEIFSLGASPY 251
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 45/192 (23%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
A +D +RE ++L L H+++V+F+ + + +V E + G+L +R L G
Sbjct: 63 ARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGP---- 116
Query: 254 DAKIV------------MVQILSV----------VAFCHFQGVVHRDLKPENFLFTSKEE 291
DAK++ + Q+L+V +A HF VHRDL N L +
Sbjct: 117 DAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVG---Q 170
Query: 292 NSSLKAIDFGLS------DYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIA 344
+K DFG+S DY + R + ++ PE +L+R + TE+D+WS GV+
Sbjct: 171 GLVVKIGDFGMSRDIYSTDYYRVGGR---TMLPIRWMPPESILYRKFTTESDVWSFGVVL 227
Query: 345 Y-ILLCGSRPFW 355
+ I G +P++
Sbjct: 228 WEIFTYGKQPWY 239
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 55/254 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----------GATHSEHRALM- 115
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELL 240
E+KIL + H N+V A + +++E CK G L
Sbjct: 116 ------------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 157
Query: 241 DRILSRGGKY---------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ S+ ++ + E Q+ + F + +HRDL N L
Sbjct: 158 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 217
Query: 286 FTSKEENSSLKAIDFGLSD--YVKPDE-RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIG 341
+ E + +K DFGL+ Y PD R D ++APE + R Y ++D+WS G
Sbjct: 218 LS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 274
Query: 342 VIAY-ILLCGSRPF 354
V+ + I G+ P+
Sbjct: 275 VLLWEIFSLGASPY 288
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L + +
Sbjct: 53 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEFLPYGSLREYL-- 107
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HRDL N L E + +K DFG
Sbjct: 108 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFG 162
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 45/192 (23%)
Query: 194 AIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
A +D +RE ++L L H+++V+F+ + + +V E + G+L +R L G
Sbjct: 57 ARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGP---- 110
Query: 254 DAKIV------------MVQILSV----------VAFCHFQGVVHRDLKPENFLFTSKEE 291
DAK++ + Q+L+V +A HF VHRDL N L +
Sbjct: 111 DAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVG---Q 164
Query: 292 NSSLKAIDFGLS------DYVKPDERLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIA 344
+K DFG+S DY + R + ++ PE +L+R + TE+D+WS GV+
Sbjct: 165 GLVVKIGDFGMSRDIYSTDYYRVGGR---TMLPIRWMPPESILYRKFTTESDVWSFGVVL 221
Query: 345 Y-ILLCGSRPFW 355
+ I G +P++
Sbjct: 222 WEIFTYGKQPWY 233
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 54/252 (21%)
Query: 125 LGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILD 182
LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 32 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----------THSEHRALM-- 79
Query: 183 EYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELLD 241
E+KIL + H N+V A + +++E CK G L
Sbjct: 80 -----------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 122
Query: 242 RILSRGGKY--------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFT 287
+ S+ ++ + E Q+ + F + +HRDL N L +
Sbjct: 123 YLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182
Query: 288 SKEENSSLKAIDFGLSDYVKPDE---RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVI 343
E + +K DFGL+ + D R D ++APE + R Y ++D+WS GV+
Sbjct: 183 ---EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 344 AY-ILLCGSRPF 354
+ I G+ P+
Sbjct: 240 LWEIFSLGASPY 251
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 55/254 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----------GATHSEHRALM- 69
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELL 240
E+KIL + H N+V A + ++ E CK G L
Sbjct: 70 ------------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLS 111
Query: 241 DRILSRGGKY---------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ S+ ++ + E Q+ + F + +HRDL N L
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 171
Query: 286 FTSKEENSSLKAIDFGLSD--YVKPDE-RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIG 341
+ E + +K DFGL+ Y PD R D ++APE + R Y ++D+WS G
Sbjct: 172 LS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 342 VIAY-ILLCGSRPF 354
V+ + I G+ P+
Sbjct: 229 VLLWEIFSLGASPY 242
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 192 AIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILS-RGGKY 250
++++E E +++ L H LV+ + A + IYI+ E G LLD + S G K
Sbjct: 218 SMSVEAFLAEANVMKTLQ-HDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ 275
Query: 251 SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDE 310
QI +AF + +HRDL+ N L ++ + K DFGL+
Sbjct: 276 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGLAR------ 326
Query: 311 RLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAY-ILLCGSRPFWARTESGIFRA 365
VG+ + + APE ++ S+ ++D+WS G++ I+ G P+ + + RA
Sbjct: 327 -----VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 381
Query: 366 V 366
+
Sbjct: 382 L 382
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 55/254 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----------GATHSEHRALM- 69
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELL 240
E+KIL + H N+V A + +++E CK G L
Sbjct: 70 ------------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 111
Query: 241 DRILSRGGKY---------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ S+ ++ + E Q+ + F + +HRDL N L
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 171
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDE---RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIG 341
+ E + +K DFGL+ + D R D ++APE + R Y ++D+WS G
Sbjct: 172 LS---EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 342 VIAY-ILLCGSRPF 354
V+ + I G+ P+
Sbjct: 229 VLLWEIFSLGASPY 242
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 55/254 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----------ATHSEHRALM- 69
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELL 240
E+KIL + H N+V A + ++ E CK G L
Sbjct: 70 ------------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLS 111
Query: 241 DRILSRGGKY---------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ S+ ++ + E Q+ + F + +HRDL N L
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 171
Query: 286 FTSKEENSSLKAIDFGLSD--YVKPDE-RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIG 341
+ E + +K DFGL+ Y PD R D ++APE + R Y ++D+WS G
Sbjct: 172 LS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 342 VIAY-ILLCGSRPF 354
V+ + I G+ P+
Sbjct: 229 VLLWEIFSLGASPY 242
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++M+L G LLD + + VQI + + + +VHRDL N L
Sbjct: 91 TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 150
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 151 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 207
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 208 VTVWELMTFGSKPY 221
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 55/254 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----------THSEHRALM- 78
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELL 240
E+KIL + H N+V A + +++E CK G L
Sbjct: 79 ------------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 241 DRILSRGGKY---------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ S+ ++ + E Q+ + F + +HRDL N L
Sbjct: 121 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDE---RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIG 341
+ E + +K DFGL+ + D R D ++APE + R Y ++D+WS G
Sbjct: 181 LS---EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 342 VIAY-ILLCGSRPF 354
V+ + I G+ P+
Sbjct: 238 VLLWEIFSLGASPY 251
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 201 EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG-KYSEEDAKIVM 259
E +++ L H+ LV+ Y A + IYI+ E + G L+D + + G K + +
Sbjct: 54 EANLMKQLQ-HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 111
Query: 260 VQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA 319
QI +AF + +HR+L+ N L + + S K DFGL+ ++ D G+
Sbjct: 112 AQIAEGMAFIEERNYIHRNLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAK 167
Query: 320 Y---YVAPEVLHRSYGT---EADMWSIGV-IAYILLCGSRPF 354
+ + APE ++ YGT ++D+WS G+ + I+ G P+
Sbjct: 168 FPIKWTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPY 207
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 55/254 (21%)
Query: 124 ELGEEVGRGHFGYTCSAKA--KKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTIL 181
+LG+ +GRG FG A A + + VAVK++ + H H+ +
Sbjct: 21 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----------GATHSEHRALM- 69
Query: 182 DEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDN-IYIVMELCKGGELL 240
E+KIL + H N+V A + ++ E CK G L
Sbjct: 70 ------------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLS 111
Query: 241 DRILSRGGKY---------------SEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ S+ ++ + E Q+ + F + +HRDL N L
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 171
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDE---RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIG 341
+ E + +K DFGL+ + D R D ++APE + R Y ++D+WS G
Sbjct: 172 LS---EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 342 VIAY-ILLCGSRPF 354
V+ + I G+ P+
Sbjct: 229 VLLWEIFSLGASPY 242
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 101/259 (38%), Gaps = 64/259 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G+FG A+ KK L+ D A+K + + ++H+
Sbjct: 33 IGEGNFGQVLKARIKKDGLR-MDAAIKRMKEY----------ASKDDHR----------- 70
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG 248
D E+++L L H N++ A E +Y+ +E G LLD + R
Sbjct: 71 --------DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL--RKS 120
Query: 249 KYSEEDAKIVMVQ----ILSVVAFCHFQG-------------VVHRDLKPENFLFTSKEE 291
+ E D + LS HF +HRDL N L E
Sbjct: 121 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---E 177
Query: 292 NSSLKAIDFGLSD----YVKPD-ERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAY 345
N K DFGLS YVK RL ++A E L+ S Y T +D+WS GV+ +
Sbjct: 178 NYVAKIADFGLSRGQEVYVKKTMGRL-----PVRWMAIESLNYSVYTTNSDVWSYGVLLW 232
Query: 346 -ILLCGSRPFWARTESGIF 363
I+ G P+ T + ++
Sbjct: 233 EIVSLGGTPYCGMTCAELY 251
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED--DDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
+RE++ILR L H+++V++ ED + ++ +VME G L D + ++ A+
Sbjct: 58 QREIEILRTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQ 112
Query: 257 IVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERL-- 312
+++ QI +A+ H Q +HR L N L + + +K DFGL+ V
Sbjct: 113 LLLFAQQICEGMAYLHAQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 169
Query: 313 --NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
D ++ APE L + +D+WS GV Y LL
Sbjct: 170 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 199 RREVKILRALTGHKNLVQFYDAYED--DDNIYIVMELCKGGELLDRILSRGGKYSEEDAK 256
+RE++ILR L H+++V++ ED + ++ +VME G L D + ++ A+
Sbjct: 59 QREIEILRTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQ 113
Query: 257 IVMV--QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERL-- 312
+++ QI +A+ H Q +HR L N L + + +K DFGL+ V
Sbjct: 114 LLLFAQQICEGMAYLHAQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 170
Query: 313 --NDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
D ++ APE L + +D+WS GV Y LL
Sbjct: 171 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 101/259 (38%), Gaps = 64/259 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G+FG A+ KK L+ D A+K + + ++H+
Sbjct: 23 IGEGNFGQVLKARIKKDGLR-MDAAIKRMKEY----------ASKDDHR----------- 60
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG 248
D E+++L L H N++ A E +Y+ +E G LLD + R
Sbjct: 61 --------DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL--RKS 110
Query: 249 KYSEEDAKIVMVQ----ILSVVAFCHFQG-------------VVHRDLKPENFLFTSKEE 291
+ E D + LS HF +HRDL N L E
Sbjct: 111 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---E 167
Query: 292 NSSLKAIDFGLSD----YVKPDE-RLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAY 345
N K DFGLS YVK RL ++A E L+ S Y T +D+WS GV+ +
Sbjct: 168 NYVAKIADFGLSRGQEVYVKKTMGRL-----PVRWMAIESLNYSVYTTNSDVWSYGVLLW 222
Query: 346 -ILLCGSRPFWARTESGIF 363
I+ G P+ T + ++
Sbjct: 223 EIVSLGGTPYCGMTCAELY 241
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 190 TTAIAIEDVRREVKILRALTGHKNLVQF----YDAYEDDDNIYIVMELCKGGELLDRILS 245
+T + D RE++IL++L H N+V++ Y A N+ ++ME G L D +
Sbjct: 51 STEEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYL-- 105
Query: 246 RGGKYSEEDAKIVMVQILSVVA----FCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFG 301
K+ E I ++Q S + + + +HR+L N L E + +K DFG
Sbjct: 106 --QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILV---ENENRVKIGDFG 160
Query: 302 LSDYVKPDERLNDIV----GSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
L+ + D+ + ++ APE L S + +D+WS GV+ Y L
Sbjct: 161 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 212
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++M+L G LLD + + VQI + + + +VHRDL N L
Sbjct: 94 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 153
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 154 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 210
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 211 VTVWELMTFGSKPY 224
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 55/246 (22%)
Query: 123 YELGEEVGRGHFG--YTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTI 180
Y LG ++G G FG Y + A G++VA+K+ C K ++ Q I
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIAS-----GEEVAIKL------------ECVKTKHPQLHI 53
Query: 181 LDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELL 240
++ + M + I ++ + E D N+ +VMEL G L
Sbjct: 54 ESKFYKM-MQGGVGIPSIK------------------WCGAEGDYNV-MVMELL-GPSLE 92
Query: 241 DRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDF 300
D K+S + ++ Q++S + + H + +HRD+KP+NFL ++ + + IDF
Sbjct: 93 DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152
Query: 301 GLSDYVK--------PDERLNDIVGSAYYVAPEVLHRSYGTEA----DMWSIGVIAYILL 348
GL+ + P ++ G+A Y + ++ G E D+ S+G +
Sbjct: 153 GLAKKYRDARTHQHIPYRENKNLTGTARYAS---INTHLGIEQSRRDDLESLGYVLMYFN 209
Query: 349 CGSRPF 354
GS P+
Sbjct: 210 LGSLPW 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++M+L G LLD + + VQI + + + +VHRDL N L
Sbjct: 93 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 153 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 210 VTVWELMTFGSKPY 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++M+L G LLD + + VQI + + + +VHRDL N L
Sbjct: 90 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 150 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 207 VTVWELMTFGSKPY 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++M+L G LLD + + VQI + + + +VHRDL N L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 152 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 209 VTVWELMTFGSKPY 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++M+L G LLD + + VQI + + + +VHRDL N L
Sbjct: 91 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 150
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 151 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 207
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 208 VTVWELMTFGSKPY 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++M+L G LLD + + VQI + + + +VHRDL N L
Sbjct: 97 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 157 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 214 VTVWELMTFGSKPY 227
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYE---DDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
D +RE++IL+AL H + + Y ++ +VME G L D + +
Sbjct: 58 DFQREIQILKAL--HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS 115
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+ QI + + + VHRDL N L E + +K DFGL+ + D+
Sbjct: 116 RLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYY 172
Query: 314 DI----VGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
+ ++ APE L + + ++D+WS GV+ Y L
Sbjct: 173 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 253 EDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTS----------------------KE 290
ED K+ ++IL + + + H DLKPEN L +
Sbjct: 137 EDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRT 196
Query: 291 ENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLC 349
+++ +K IDFG + + K D I+ + Y APEV L+ + +DMWS G + L
Sbjct: 197 KSTGIKLIDFGCATF-KSDYH-GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
Query: 350 GSRPF 354
GS F
Sbjct: 255 GSLLF 259
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYE---DDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
D +RE++IL+AL H + + Y ++ +VME G L D + +
Sbjct: 57 DFQREIQILKAL--HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS 114
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+ QI + + + VHRDL N L E + +K DFGL+ + D+
Sbjct: 115 RLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYY 171
Query: 314 DI----VGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
+ ++ APE L + + ++D+WS GV+ Y L
Sbjct: 172 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYE---DDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
D +RE++IL+AL H + + Y ++ +VME G L D + +
Sbjct: 70 DFQREIQILKAL--HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS 127
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+ QI + + + VHRDL N L E + +K DFGL+ + D+
Sbjct: 128 RLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYY 184
Query: 314 DI----VGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
+ ++ APE L + + ++D+WS GV+ Y L
Sbjct: 185 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 49/243 (20%)
Query: 123 YELGEEVGRGHFG--YTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTI 180
Y LG ++G G FG Y + A G++VA+K+ C K ++ Q I
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAA-----GEEVAIKL------------ECVKTKHPQLHI 51
Query: 181 LDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELL 240
+ M + I +R + E D N+ +VMEL G L
Sbjct: 52 -ESKIYKMMQGGVGIPTIR------------------WCGAEGDYNV-MVMELL-GPSLE 90
Query: 241 DRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDF 300
D K+S + ++ Q++S + + H + +HRD+KP+NFL ++ + + IDF
Sbjct: 91 DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 150
Query: 301 GLSDYVK--------PDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGS 351
GL+ + P ++ G+A Y + L D+ S+G + GS
Sbjct: 151 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 210
Query: 352 RPF 354
P+
Sbjct: 211 LPW 213
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 49/243 (20%)
Query: 123 YELGEEVGRGHFG--YTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTI 180
Y LG ++G G FG Y + A G++VA+K+ C K ++ Q I
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAA-----GEEVAIKL------------ECVKTKHPQLHI 53
Query: 181 LDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELL 240
+ M + I +R + E D N+ +VMEL G L
Sbjct: 54 -ESKIYKMMQGGVGIPTIR------------------WCGAEGDYNV-MVMELL-GPSLE 92
Query: 241 DRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDF 300
D K+S + ++ Q++S + + H + +HRD+KP+NFL ++ + + IDF
Sbjct: 93 DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152
Query: 301 GLSDYVK--------PDERLNDIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGS 351
GL+ + P ++ G+A Y + L D+ S+G + GS
Sbjct: 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 212
Query: 352 RPF 354
P+
Sbjct: 213 LPW 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 197 DVRREVKILRALTGHKNLVQFYDAYE---DDDNIYIVMELCKGGELLDRILSRGGKYSEE 253
D +RE++IL+AL H + + Y + +VME G L D + +
Sbjct: 54 DFQREIQILKAL--HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDAS 111
Query: 254 DAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLN 313
+ QI + + + VHRDL N L E + +K DFGL+ + D+
Sbjct: 112 RLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDXX 168
Query: 314 DI----VGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILL 348
+ ++ APE L + + ++D+WS GV+ Y L
Sbjct: 169 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
++ +V + G LLD + G + VQI + + G+VHR+L N L
Sbjct: 106 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL 165
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDER---LNDIVGSAYYVAPEVLH-RSYGTEADMWSIG 341
S S ++ DFG++D + PD++ ++ ++A E +H Y ++D+WS G
Sbjct: 166 LKSP---SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYG 222
Query: 342 VIAYILLC-GSRPF 354
V + L+ G+ P+
Sbjct: 223 VTVWELMTFGAEPY 236
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 61/260 (23%)
Query: 124 ELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDE 183
+ G+ +G G FG A A L +D +KV KM+ K H DE
Sbjct: 34 QFGKTLGAGAFGKVVEATAF--GLGKEDAVLKVAVKML----------KSTAHA----DE 77
Query: 184 YCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRI 243
E + E+KI+ L H+N+V A + ++ E C G+LL+ +
Sbjct: 78 K-----------EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 126
Query: 244 LSRG----------GKYSE----EDAKIVMV--------QILSVVAFCHFQGVVHRDLKP 281
+ G+ E ED + + + Q+ +AF + +HRD+
Sbjct: 127 RRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAA 186
Query: 282 ENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIV-GSAY----YVAPE-VLHRSYGTEA 335
N L T+ K DFGL+ + D N IV G+A ++APE + Y ++
Sbjct: 187 RNVLLTN---GHVAKIGDFGLARDIMNDS--NYIVKGNARLPVKWMAPESIFDCVYTVQS 241
Query: 336 DMWSIGVIAY-ILLCGSRPF 354
D+WS G++ + I G P+
Sbjct: 242 DVWSYGILLWEIFSLGLNPY 261
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ +V +L G LLD + G+ +D +QI +++ +VHRDL N L
Sbjct: 92 TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVL 151
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGS----AYYVAPEVLHRSYGTEADMWSIG 341
S + +K DFGL+ + DE G + +L R + ++D+WS G
Sbjct: 152 VKSP---NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYG 208
Query: 342 VIAYILLC-GSRPF 354
V + L+ G++P+
Sbjct: 209 VTVWELMTFGAKPY 222
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 101/259 (38%), Gaps = 64/259 (24%)
Query: 129 VGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQFTILDEYCCLF 188
+G G+FG A+ KK L+ D A+K + + ++H+
Sbjct: 30 IGEGNFGQVLKARIKKDGLR-MDAAIKRMKEY----------ASKDDHR----------- 67
Query: 189 MTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGG 248
D E+++L L H N++ A E +Y+ +E G LLD + R
Sbjct: 68 --------DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL--RKS 117
Query: 249 KYSEEDAKIVMVQ----ILSVVAFCHFQG-------------VVHRDLKPENFLFTSKEE 291
+ E D + LS HF +HR+L N L E
Sbjct: 118 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVG---E 174
Query: 292 NSSLKAIDFGLSD----YVKPD-ERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAY 345
N K DFGLS YVK RL ++A E L+ S Y T +D+WS GV+ +
Sbjct: 175 NYVAKIADFGLSRGQEVYVKKTMGRL-----PVRWMAIESLNYSVYTTNSDVWSYGVLLW 229
Query: 346 -ILLCGSRPFWARTESGIF 363
I+ G P+ T + ++
Sbjct: 230 EIVSLGGTPYCGMTCAELY 248
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 223 DDDNIYIVMELCKG------------GELLDRILSRGGKYSEEDAKIVMVQILSVVAFCH 270
D +I ++ LC G G LLD + G + VQI + +
Sbjct: 73 DHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 132
Query: 271 FQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDER---LNDIVGSAYYVAPEVL 327
G+VHR+L N L S S ++ DFG++D + PD++ ++ ++A E +
Sbjct: 133 EHGMVHRNLAARNVLLKSP---SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 328 H-RSYGTEADMWSIGVIAYILLC-GSRPF 354
H Y ++D+WS GV + L+ G+ P+
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMTFGAEPY 218
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 90 TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 150 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 207 VTVWELMTFGSKPY 220
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEV-LHRSYG 332
++H DLKPEN L + + S++K +DFG S + +R+ + S +Y +PEV L Y
Sbjct: 180 IIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 333 TEADMWSIGVIAYILLCGSRPFWARTE 359
DMWS+G I + G F E
Sbjct: 237 LAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEV-LHRSYG 332
++H DLKPEN L + + S++K +DFG S + +R+ + S +Y +PEV L Y
Sbjct: 161 IIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 217
Query: 333 TEADMWSIGVIAYILLCGSRPFWARTE 359
DMWS+G I + G F E
Sbjct: 218 LAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 253 EDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD--YVKPDE 310
ED Q+ + F + +HRDL N L + EN+ +K DFGL+ Y PD
Sbjct: 199 EDLISYSFQVARGMEFLSSRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKNPDY 255
Query: 311 -RLNDIVGSAYYVAPE-VLHRSYGTEADMWSIGVIAY-ILLCGSRPF 354
R D ++APE + + Y T++D+WS GV+ + I G P+
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 100 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 159
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 160 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 216
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 217 VTVWELMTFGSKPY 230
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 96 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 155
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 156 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 212
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 213 VTVWELMTFGSKPY 226
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 105/261 (40%), Gaps = 74/261 (28%)
Query: 225 DNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV-----QILSVVAFCHFQ-GVVHRD 278
+ +++VM GE +L+ KY ++ V Q+L + + H + G++H D
Sbjct: 101 NGVHVVMVFEVLGE---NLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTD 157
Query: 279 LKPENFLF---TSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTE 334
+KPEN L S E +K D G + + DE + + + Y +PEVL + +G
Sbjct: 158 IKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYTNSIQTREYRSPEVLLGAPWGCG 215
Query: 335 ADMWSIGVIAYILLCGSRPF----------------------------------WART-- 358
AD+WS + + L+ G F + RT
Sbjct: 216 ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFF 275
Query: 359 -ESGIFRAV--LKADP-----------SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAA 404
G+ R + LK P S DEA E DF+ +L D RKR A
Sbjct: 276 NSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA------KEISDFLSPMLQLDPRKRADAG 329
Query: 405 QALSHPWLANS---HDVKIPS 422
++HPWL ++ ++++P
Sbjct: 330 GLVNHPWLKDTLGMEEIRVPD 350
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 93 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 153 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 210 VTVWELMTFGSKPY 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 93 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 153 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 210 VTVWELMTFGSKPY 223
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 105/261 (40%), Gaps = 74/261 (28%)
Query: 225 DNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMV-----QILSVVAFCHFQ-GVVHRD 278
+ +++VM GE +L+ KY ++ V Q+L + + H + G++H D
Sbjct: 101 NGVHVVMVFEVLGE---NLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTD 157
Query: 279 LKPENFLF---TSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTE 334
+KPEN L S E +K D G + + DE + + + Y +PEVL + +G
Sbjct: 158 IKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYTNSIQTREYRSPEVLLGAPWGCG 215
Query: 335 ADMWSIGVIAYILLCGSRPF----------------------------------WART-- 358
AD+WS + + L+ G F + RT
Sbjct: 216 ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFF 275
Query: 359 -ESGIFRAV--LKADP-----------SFDEAPWPSLSPEAIDFVKRLLNKDYRKRLTAA 404
G+ R + LK P S DEA E DF+ +L D RKR A
Sbjct: 276 NSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA------KEISDFLSPMLQLDPRKRADAG 329
Query: 405 QALSHPWLANS---HDVKIPS 422
++HPWL ++ ++++P
Sbjct: 330 GLVNHPWLKDTLGMEEIRVPD 350
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 93 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 153 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 210 VTVWELMTFGSKPY 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 115 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 174
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 175 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 231
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 232 VTVWELMTFGSKPY 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++M+L G LLD + + VQI + + + +VHRDL N L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFG + + +E+ G + +LHR Y ++D+WS G
Sbjct: 152 VKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 209 VTVWELMTFGSKPY 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 150 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 207 VTVWELMTFGSKPY 220
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 97 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 157 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 214 VTVWELMTFGSKPY 227
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 150 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 207 VTVWELMTFGSKPY 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 92 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 152 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 209 VTVWELMTFGSKPY 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++M+L G LLD + + VQI + + + +VHRDL N L
Sbjct: 94 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 153
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFG + + +E+ G + +LHR Y ++D+WS G
Sbjct: 154 VKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 210
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 211 VTVWELMTFGSKPY 224
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++M+L G LLD + + VQI + + + +VHRDL N L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFG + + +E+ G + +LHR Y ++D+WS G
Sbjct: 152 VKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 209 VTVWELMTFGSKPY 222
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 124 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 183
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 184 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 240
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 241 VTVWELMTFGSKPY 254
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 97 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 157 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 214 VTVWELMTFGSKPY 227
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 202 VKILRALTGHKNLVQFYD-----AYED------------DDNIYIVMELCKGGELLDRIL 244
+KIL TG K V+F D A D I +V +L G LL+ +
Sbjct: 72 IKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVH 131
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
+ VQI + + + +VHRDL N L S + +K DFGL+
Sbjct: 132 EHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSP---NHVKITDFGLAR 188
Query: 305 YVKPDERLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAYILLC-GSRPF 354
++ DE+ + G ++A E +H R + ++D+WS GV + L+ G +P+
Sbjct: 189 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 243
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 150 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 207 VTVWELMTFGSKPY 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 84 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 143
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 144 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 201 VTVWELMTFGSKPY 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 87 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVL 146
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFGL+ + +E+ G + +LHR Y ++D+WS G
Sbjct: 147 VKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 203
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 204 VTVWELMTFGSKPY 217
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLFTSK--EENSSLKAIDFGLS-DYVKPDERLN 313
++ +Q+LS + + H + +++RD+KPENFL + ++ + IDFGL+ +Y+ P+ + +
Sbjct: 101 MIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKH 160
Query: 314 -------DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF 354
+ G+A Y++ L + D+ ++G + L GS P+
Sbjct: 161 IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 202 VKILRALTGHKNLVQFYD-----AYED------------DDNIYIVMELCKGGELLDRIL 244
+KIL TG K V+F D A D I +V +L G LL+ +
Sbjct: 49 IKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVH 108
Query: 245 SRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD 304
+ VQI + + + +VHRDL N L S + +K DFGL+
Sbjct: 109 EHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSP---NHVKITDFGLAR 165
Query: 305 YVKPDERLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAYILLC-GSRPF 354
++ DE+ + G ++A E +H R + ++D+WS GV + L+ G +P+
Sbjct: 166 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLS------DYVKPDERLND 314
Q+ + +A+ + VHRDL N L EN +K DFGLS DY K D ND
Sbjct: 182 QVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIADFGLSRNIYSADYYKADG--ND 236
Query: 315 IVGSAYYVAPEVLHRSYGTEADMWSIGVIAY-ILLCGSRPFWA 356
+ + + + Y TE+D+W+ GV+ + I G +P++
Sbjct: 237 AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 274 VVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEV-LHRSYG 332
++H DLKPEN L + + ++K +DFG S + +R+ + S +Y +PEV L Y
Sbjct: 180 IIHCDLKPENILLCNPKR-XAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 333 TEADMWSIGVIAYILLCGSRPFWARTE 359
DMWS+G I + G F E
Sbjct: 237 LAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 250 YSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFT--SKEENSSLKAIDFGLS-DYV 306
+S + ++ +Q++S + + H + +++RD+KPENFL + + IDFGL+ +Y+
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYI 161
Query: 307 KPDERLN-------DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF 354
P+ + + + G+A Y++ L + D+ ++G + L GS P+
Sbjct: 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 217
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
+ H+ E +GRGHFG C G+L D ++HC ++
Sbjct: 89 LIVHFN--EVIGRGHFG--C---VYHGTLLDNDGK-------------KIHCAVKSLNRI 128
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYD-AYEDDDNIYIVMELCKGG 237
T + E F+T I ++D H N++ + + +V+ K G
Sbjct: 129 TDIGE-VSQFLTEGIIMKDF-----------SHPNVLSLLGICLRSEGSPLVVLPYMKHG 176
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
+L + I + + +D +Q+ + F + VHRDL N + +E ++K
Sbjct: 177 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKV 233
Query: 298 IDFGLSD--YVKPDERLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAYILLCGS 351
DFGL+ Y K + +++ G+ ++A E L + + T++D+WS GV+ + L+
Sbjct: 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 293
Query: 352 RP 353
P
Sbjct: 294 AP 295
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 102/257 (39%), Gaps = 74/257 (28%)
Query: 117 KQFVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENH 176
+ ++ +++G+G +G + G +G+ VAVKV
Sbjct: 33 RTIAKQIQMVKQIGKGRYG-----EVWMGKWRGEKVAVKV-------------------- 67
Query: 177 QFTILDEYCCLFMTTAIAIEDVRREVKILRA-LTGHKNLVQFYDA----YEDDDNIYIVM 231
F TT A RE +I + L H+N++ F A +Y++
Sbjct: 68 -----------FFTTEEA--SWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLIT 114
Query: 232 ELCKGGELLDRILSRGGKYSEEDAK-IVMVQILSVVAFCHF-------QG---VVHRDLK 280
+ + G L D + K + DAK ++ + SV CH QG + HRDLK
Sbjct: 115 DYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169
Query: 281 PENFLFTSKEENSSLKAIDFGL-----SDYVKPDERLNDIVGSAYYVAPEVLHRSYGTE- 334
+N L ++N + D GL SD + D N VG+ Y+ PEVL S
Sbjct: 170 SKNILV---KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH 226
Query: 335 ------ADMWSIGVIAY 345
ADM+S G+I +
Sbjct: 227 FQSYIMADMYSFGLILW 243
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
+ H+ E +GRGHFG C G+L D ++HC ++
Sbjct: 35 LIVHFN--EVIGRGHFG--C---VYHGTLLDNDGK-------------KIHCAVKSLNRI 74
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYD-AYEDDDNIYIVMELCKGG 237
T + E F+T I ++D H N++ + + +V+ K G
Sbjct: 75 TDIGE-VSQFLTEGIIMKDF-----------SHPNVLSLLGICLRSEGSPLVVLPYMKHG 122
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
+L + I + + +D +Q+ + F + VHRDL N + +E ++K
Sbjct: 123 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKV 179
Query: 298 IDFGLSD--YVKPDERLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAYILLCGS 351
DFGL+ Y K + +++ G+ ++A E L + + T++D+WS GV+ + L+
Sbjct: 180 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 239
Query: 352 RP 353
P
Sbjct: 240 AP 241
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
+ H+ E +GRGHFG C G+L D ++HC ++
Sbjct: 28 LIVHFN--EVIGRGHFG--C---VYHGTLLDNDGK-------------KIHCAVKSLNRI 67
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYD-AYEDDDNIYIVMELCKGG 237
T + E F+T I ++D H N++ + + +V+ K G
Sbjct: 68 TDIGE-VSQFLTEGIIMKDF-----------SHPNVLSLLGICLRSEGSPLVVLPYMKHG 115
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
+L + I + + +D +Q+ + F + VHRDL N + +E ++K
Sbjct: 116 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKV 172
Query: 298 IDFGLSD--YVKPDERLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAYILLCGS 351
DFGL+ Y K + +++ G+ ++A E L + + T++D+WS GV+ + L+
Sbjct: 173 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 232
Query: 352 RP 353
P
Sbjct: 233 AP 234
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
+ H+ E +GRGHFG C G+L D ++HC ++
Sbjct: 30 LIVHFN--EVIGRGHFG--C---VYHGTLLDNDGK-------------KIHCAVKSLNRI 69
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYD-AYEDDDNIYIVMELCKGG 237
T + E F+T I ++D H N++ + + +V+ K G
Sbjct: 70 TDIGE-VSQFLTEGIIMKDF-----------SHPNVLSLLGICLRSEGSPLVVLPYMKHG 117
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
+L + I + + +D +Q+ + F + VHRDL N + +E ++K
Sbjct: 118 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKV 174
Query: 298 IDFGLSD--YVKPDERLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAYILLCGS 351
DFGL+ Y K + +++ G+ ++A E L + + T++D+WS GV+ + L+
Sbjct: 175 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 352 RP 353
P
Sbjct: 235 AP 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
+ H+ E +GRGHFG C G+L D ++HC ++
Sbjct: 31 LIVHFN--EVIGRGHFG--C---VYHGTLLDNDGK-------------KIHCAVKSLNRI 70
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYD-AYEDDDNIYIVMELCKGG 237
T + E F+T I ++D H N++ + + +V+ K G
Sbjct: 71 TDIGE-VSQFLTEGIIMKDF-----------SHPNVLSLLGICLRSEGSPLVVLPYMKHG 118
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
+L + I + + +D +Q+ + F + VHRDL N + +E ++K
Sbjct: 119 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKV 175
Query: 298 IDFGLSD--YVKPDERLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAYILLCGS 351
DFGL+ Y K + +++ G+ ++A E L + + T++D+WS GV+ + L+
Sbjct: 176 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 235
Query: 352 RP 353
P
Sbjct: 236 AP 237
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 51/173 (29%)
Query: 211 HKNLVQFYDAYEDDDNI----YIVMELCKGGELLDRI----------------LSRGGKY 250
H+NL+QF A + N+ +++ G L D + +SRG Y
Sbjct: 68 HENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSY 127
Query: 251 SEEDAKIVMVQILSVVAFCHFQG----VVHRDLKPENFLFTSKEENSSLKAI--DFGLSD 304
ED V +C +G + HRD K +N L S L A+ DFGL+
Sbjct: 128 LHED-----------VPWCRGEGHKPSIAHRDFKSKNVLL-----KSDLTAVLADFGLAV 171
Query: 305 YVKPDERLNDI---VGSAYYVAPEVL------HRSYGTEADMWSIGVIAYILL 348
+P + D VG+ Y+APEVL R DM+++G++ + L+
Sbjct: 172 RFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 119 FVAHYELGEEVGRGHFGYTCSAKAKKGSLKGQDVAVKVIPKMIGVIFLQVHCPKHENHQF 178
+ H+ E +GRGHFG C G+L D ++HC ++
Sbjct: 30 LIVHFN--EVIGRGHFG--C---VYHGTLLDNDGK-------------KIHCAVKSLNRI 69
Query: 179 TILDEYCCLFMTTAIAIEDVRREVKILRALTGHKNLVQFYD-AYEDDDNIYIVMELCKGG 237
T + E F+T I ++D H N++ + + +V+ K G
Sbjct: 70 TDIGE-VSQFLTEGIIMKDF-----------SHPNVLSLLGICLRSEGSPLVVLPYMKHG 117
Query: 238 ELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKA 297
+L + I + + +D +Q+ + F + VHRDL N + +E ++K
Sbjct: 118 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKV 174
Query: 298 IDFGLSD--YVKPDERLNDIVGSAY---YVAPEVLH-RSYGTEADMWSIGVIAYILLCGS 351
DFGL+ Y K + +++ G+ ++A E L + + T++D+WS GV+ + L+
Sbjct: 175 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 352 RP 353
P
Sbjct: 235 AP 236
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 257 IVMVQILSVVAFCHFQGVVHRDLKPENFLF--TSKEENSSLKAIDFGLS-DYVKPDERLN 313
++ +Q+++ + + H + +++RD+KPENFL + ++ IDFGL+ +Y+ P+ + +
Sbjct: 104 MIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKH 163
Query: 314 -------DIVGSAYYVAPEV-LHRSYGTEADMWSIGVIAYILLCGSRPF 354
+ G+A Y++ L + D+ ++G + L GS P+
Sbjct: 164 IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 212
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 226 NIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFL 285
+ ++ +L G LLD + + VQI + + + +VHRDL N L
Sbjct: 92 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 286 FTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSA----YYVAPEVLHRSYGTEADMWSIG 341
+ + +K DFG + + +E+ G + +LHR Y ++D+WS G
Sbjct: 152 VKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 342 VIAYILLC-GSRPF 354
V + L+ GS+P+
Sbjct: 209 VTVWELMTFGSKPY 222
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD--YVKPDE-RLNDIVG 317
Q+ + F + +HRDL N L + E + +K DFGL+ Y PD R D
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 318 SAYYVAPE-VLHRSYGTEADMWSIGVIAY-ILLCGSRPF 354
++APE + R Y ++D+WS GV+ + I G+ P+
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 301
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD--YVKPDE-RLNDIVG 317
Q+ + F + +HRDL N L + E + +K DFGL+ Y PD R D
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 318 SAYYVAPE-VLHRSYGTEADMWSIGVIAY-ILLCGSRPF 354
++APE + R Y ++D+WS GV+ + I G+ P+
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 296
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD--YVKPDE-RLNDIVG 317
Q+ + F + +HRDL N L + E + +K DFGL+ Y PD R D
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 318 SAYYVAPE-VLHRSYGTEADMWSIGVIAY-ILLCGSRPF 354
++APE + R Y ++D+WS GV+ + I G+ P+
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 303
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 261 QILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSD--YVKPDE-RLNDIVG 317
Q+ + F + +HRDL N L + E + +K DFGL+ Y PD R D
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 318 SAYYVAPE-VLHRSYGTEADMWSIGVIAY-ILLCGSRPF 354
++APE + R Y ++D+WS GV+ + I G+ P+
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 294
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,239,581
Number of Sequences: 62578
Number of extensions: 523090
Number of successful extensions: 4342
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 347
Number of HSP's that attempted gapping in prelim test: 1366
Number of HSP's gapped (non-prelim): 1473
length of query: 489
length of database: 14,973,337
effective HSP length: 103
effective length of query: 386
effective length of database: 8,527,803
effective search space: 3291731958
effective search space used: 3291731958
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)