Query 011302
Match_columns 489
No_of_seqs 344 out of 2883
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 23:50:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011302.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011302hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0610 Putative serine/threon 100.0 1.2E-70 2.5E-75 523.8 30.8 369 56-458 48-417 (459)
2 KOG0605 NDR and related serine 100.0 8.2E-67 1.8E-71 512.5 26.9 349 74-472 131-481 (550)
3 KOG0598 Ribosomal protein S6 k 100.0 4E-67 8.7E-72 495.6 23.5 283 81-456 22-306 (357)
4 KOG0616 cAMP-dependent protein 100.0 2.8E-66 6.1E-71 474.0 22.9 277 81-454 41-320 (355)
5 KOG0592 3-phosphoinositide-dep 100.0 2.7E-64 5.9E-69 494.3 27.9 288 80-452 69-357 (604)
6 KOG0694 Serine/threonine prote 100.0 1.5E-62 3.2E-67 495.0 25.9 284 79-457 363-650 (694)
7 KOG0615 Serine/threonine prote 100.0 1.9E-61 4.2E-66 460.0 15.5 279 82-455 170-463 (475)
8 KOG0575 Polo-like serine/threo 100.0 1.5E-59 3.2E-64 468.3 25.8 259 84-440 18-277 (592)
9 KOG0595 Serine/threonine-prote 100.0 1.3E-56 2.8E-61 427.6 21.4 259 83-438 9-273 (429)
10 KOG0581 Mitogen-activated prot 100.0 4E-56 8.7E-61 420.9 22.8 259 81-440 76-342 (364)
11 KOG0690 Serine/threonine prote 100.0 8.7E-57 1.9E-61 415.6 14.2 285 79-457 163-450 (516)
12 KOG0593 Predicted protein kina 100.0 6.8E-56 1.5E-60 406.6 14.0 266 84-439 2-290 (396)
13 KOG0588 Serine/threonine prote 100.0 4E-55 8.6E-60 438.0 18.1 263 83-444 11-274 (786)
14 KOG0986 G protein-coupled rece 100.0 5.6E-55 1.2E-59 419.4 17.1 289 79-460 180-476 (591)
15 KOG0661 MAPK related serine/th 100.0 1.3E-54 2.8E-59 420.1 18.5 264 83-438 9-296 (538)
16 KOG0612 Rho-associated, coiled 100.0 8.6E-55 1.9E-59 457.0 18.1 284 79-455 70-360 (1317)
17 KOG0583 Serine/threonine prote 100.0 1.1E-53 2.3E-58 427.0 23.2 261 81-438 14-280 (370)
18 KOG0580 Serine/threonine prote 100.0 2.7E-54 5.8E-59 384.5 15.6 262 79-438 17-278 (281)
19 PTZ00426 cAMP-dependent protei 100.0 7.4E-53 1.6E-57 421.6 27.3 281 79-455 25-308 (340)
20 KOG0585 Ca2+/calmodulin-depend 100.0 1.3E-53 2.9E-58 412.5 19.4 270 77-438 90-377 (576)
21 KOG0597 Serine-threonine prote 100.0 3.7E-54 8E-59 423.2 15.1 255 84-438 2-256 (808)
22 PTZ00263 protein kinase A cata 100.0 2.8E-52 6.1E-57 416.0 27.7 267 81-444 15-282 (329)
23 KOG0608 Warts/lats-like serine 100.0 3.7E-53 8.1E-58 420.1 20.8 323 81-455 626-950 (1034)
24 KOG0591 NIMA (never in mitosis 100.0 3.3E-54 7.1E-59 391.8 11.0 252 81-424 16-276 (375)
25 cd05612 STKc_PRKX_like Catalyt 100.0 3.1E-52 6.8E-57 408.5 25.7 265 84-445 1-266 (291)
26 KOG0696 Serine/threonine prote 100.0 9.4E-54 2E-58 406.2 13.6 281 81-455 346-630 (683)
27 KOG0611 Predicted serine/threo 100.0 2.9E-53 6.4E-58 402.0 16.1 253 84-436 53-306 (668)
28 cd05631 STKc_GRK4 Catalytic do 100.0 7.4E-52 1.6E-56 404.6 26.5 277 85-454 1-284 (285)
29 cd05628 STKc_NDR1 Catalytic do 100.0 3.2E-51 6.9E-56 414.0 30.7 308 84-450 1-310 (363)
30 cd05599 STKc_NDR_like Catalyti 100.0 1.5E-51 3.2E-56 416.7 26.1 315 84-454 1-317 (364)
31 cd05571 STKc_PKB Catalytic dom 100.0 1.4E-51 3E-56 410.0 25.3 271 90-454 1-274 (323)
32 KOG0600 Cdc2-related protein k 100.0 1.7E-52 3.7E-57 408.1 17.9 271 81-440 114-407 (560)
33 cd05629 STKc_NDR_like_fungal C 100.0 2.1E-51 4.5E-56 417.5 26.1 325 84-455 1-327 (377)
34 cd05616 STKc_cPKC_beta Catalyt 100.0 7.1E-51 1.5E-55 404.9 28.9 276 85-454 1-280 (323)
35 cd05590 STKc_nPKC_eta Catalyti 100.0 4.5E-51 9.7E-56 405.8 27.3 273 90-456 1-278 (320)
36 KOG0033 Ca2+/calmodulin-depend 100.0 1.7E-53 3.8E-58 379.9 8.2 261 83-440 10-274 (355)
37 cd05625 STKc_LATS1 Catalytic d 100.0 4.6E-51 9.9E-56 415.7 27.1 324 85-455 2-328 (382)
38 KOG0695 Serine/threonine prote 100.0 7.3E-52 1.6E-56 384.3 19.0 319 77-489 243-579 (593)
39 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.6E-51 7.8E-56 408.8 25.2 277 84-455 1-279 (333)
40 cd05589 STKc_PKN Catalytic dom 100.0 1.3E-50 2.9E-55 403.1 28.9 275 86-455 1-281 (324)
41 KOG0614 cGMP-dependent protein 100.0 7.5E-53 1.6E-57 409.2 12.2 285 76-455 412-701 (732)
42 KOG0659 Cdk activating kinase 100.0 1E-51 2.2E-56 373.1 18.6 266 84-439 2-287 (318)
43 cd05587 STKc_cPKC Catalytic do 100.0 1.6E-50 3.5E-55 402.6 28.7 276 85-454 1-280 (324)
44 cd05585 STKc_YPK1_like Catalyt 100.0 1.5E-50 3.3E-55 400.6 27.8 268 92-454 1-270 (312)
45 KOG0578 p21-activated serine/t 100.0 8.9E-52 1.9E-56 409.5 17.7 256 83-438 272-528 (550)
46 KOG0582 Ste20-like serine/thre 100.0 1E-50 2.3E-55 390.1 24.1 277 79-440 21-300 (516)
47 cd05627 STKc_NDR2 Catalytic do 100.0 1.5E-50 3.3E-55 408.6 26.7 306 84-448 1-308 (360)
48 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-50 3.4E-55 411.5 26.1 321 85-454 2-327 (381)
49 cd05598 STKc_LATS Catalytic do 100.0 8.4E-51 1.8E-55 412.9 23.9 320 84-454 1-323 (376)
50 cd05593 STKc_PKB_gamma Catalyt 100.0 2.5E-50 5.4E-55 401.8 26.4 271 90-454 1-274 (328)
51 KOG0663 Protein kinase PITSLRE 100.0 2.4E-51 5.2E-56 381.3 16.9 280 80-449 72-377 (419)
52 cd05595 STKc_PKB_beta Catalyti 100.0 4.6E-50 1E-54 399.0 27.3 271 90-454 1-274 (323)
53 cd05591 STKc_nPKC_epsilon Cata 100.0 4.1E-50 8.9E-55 399.1 26.7 271 90-454 1-277 (321)
54 cd05575 STKc_SGK Catalytic dom 100.0 5.4E-50 1.2E-54 398.6 27.4 271 90-454 1-274 (323)
55 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.9E-50 4.1E-55 406.3 24.0 304 84-455 1-307 (350)
56 cd05620 STKc_nPKC_delta Cataly 100.0 7.4E-50 1.6E-54 396.3 27.8 268 90-454 1-271 (316)
57 cd05615 STKc_cPKC_alpha Cataly 100.0 1.5E-49 3.2E-54 395.4 29.6 276 85-454 1-280 (323)
58 cd05592 STKc_nPKC_theta_delta 100.0 8.9E-50 1.9E-54 395.8 27.5 268 90-454 1-271 (316)
59 cd05621 STKc_ROCK2 Catalytic d 100.0 7.4E-50 1.6E-54 404.4 26.8 281 79-455 38-328 (370)
60 KOG0198 MEKK and related serin 100.0 8.4E-51 1.8E-55 391.1 18.7 262 84-440 17-283 (313)
61 cd05588 STKc_aPKC Catalytic do 100.0 1.4E-49 3.1E-54 396.6 28.0 271 90-454 1-285 (329)
62 cd05622 STKc_ROCK1 Catalytic d 100.0 2.4E-49 5.1E-54 401.0 29.5 284 78-455 37-328 (371)
63 KOG0032 Ca2+/calmodulin-depend 100.0 3.7E-50 8.1E-55 401.3 22.9 264 83-442 34-302 (382)
64 cd05601 STKc_CRIK Catalytic do 100.0 8.3E-50 1.8E-54 398.4 25.3 277 84-455 1-285 (330)
65 KOG0599 Phosphorylase kinase g 100.0 6.3E-52 1.4E-56 375.2 8.8 271 84-449 17-299 (411)
66 cd05596 STKc_ROCK Catalytic do 100.0 1.3E-49 2.8E-54 402.9 26.8 281 78-454 37-327 (370)
67 cd05570 STKc_PKC Catalytic dom 100.0 2.2E-49 4.8E-54 393.3 27.6 271 90-454 1-275 (318)
68 cd05594 STKc_PKB_alpha Catalyt 100.0 7.7E-50 1.7E-54 397.8 23.9 270 90-453 1-274 (325)
69 cd05602 STKc_SGK1 Catalytic do 100.0 2.5E-49 5.3E-54 394.2 27.5 261 90-444 1-262 (325)
70 cd05619 STKc_nPKC_theta Cataly 100.0 2.1E-49 4.5E-54 393.1 26.4 268 90-454 1-271 (316)
71 cd05604 STKc_SGK3 Catalytic do 100.0 1.8E-49 4E-54 395.1 26.0 270 90-453 1-273 (325)
72 cd05623 STKc_MRCK_alpha Cataly 100.0 3.9E-49 8.4E-54 393.9 27.7 281 84-455 1-288 (332)
73 cd05603 STKc_SGK2 Catalytic do 100.0 3.4E-49 7.4E-54 392.5 26.8 270 90-453 1-273 (321)
74 cd05618 STKc_aPKC_iota Catalyt 100.0 2.2E-49 4.8E-54 395.1 25.1 271 90-454 1-285 (329)
75 cd05605 STKc_GRK4_like Catalyt 100.0 3.7E-49 8E-54 385.6 25.8 276 85-453 1-283 (285)
76 cd05597 STKc_DMPK_like Catalyt 100.0 8.1E-49 1.8E-53 391.4 28.7 280 84-454 1-287 (331)
77 cd05608 STKc_GRK1 Catalytic do 100.0 5.2E-49 1.1E-53 383.5 26.5 262 92-445 1-269 (280)
78 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.8E-49 1.2E-53 391.8 27.3 271 90-454 1-283 (327)
79 cd05586 STKc_Sck1_like Catalyt 100.0 1.7E-49 3.7E-54 396.2 22.8 270 92-454 1-276 (330)
80 cd05624 STKc_MRCK_beta Catalyt 100.0 5.5E-49 1.2E-53 392.7 26.1 281 84-455 1-288 (331)
81 cd05607 STKc_GRK7 Catalytic do 100.0 6.1E-49 1.3E-53 382.4 25.7 269 92-452 1-275 (277)
82 cd05584 STKc_p70S6K Catalytic 100.0 8E-49 1.7E-53 390.2 26.2 265 89-444 1-267 (323)
83 cd05614 STKc_MSK2_N N-terminal 100.0 1.9E-48 4.2E-53 388.9 27.9 280 85-454 1-290 (332)
84 KOG0192 Tyrosine kinase specif 100.0 4.3E-49 9.3E-54 390.5 22.7 253 81-425 38-295 (362)
85 cd05582 STKc_RSK_N N-terminal 100.0 6.6E-49 1.4E-53 389.9 24.0 272 90-453 2-276 (318)
86 cd05574 STKc_phototropin_like 100.0 4.2E-48 9.1E-53 383.6 28.5 311 84-455 1-311 (316)
87 KOG0660 Mitogen-activated prot 100.0 2.2E-49 4.7E-54 373.7 16.9 268 84-440 22-317 (359)
88 KOG0594 Protein kinase PCTAIRE 100.0 3.9E-49 8.6E-54 373.2 18.4 269 83-440 10-309 (323)
89 KOG0667 Dual-specificity tyros 100.0 5.1E-49 1.1E-53 397.0 20.3 261 84-439 186-508 (586)
90 KOG0201 Serine/threonine prote 100.0 1.4E-50 3.1E-55 389.0 8.2 258 84-440 13-270 (467)
91 cd05630 STKc_GRK6 Catalytic do 100.0 5.6E-48 1.2E-52 377.3 24.3 277 85-454 1-284 (285)
92 KOG4717 Serine/threonine prote 100.0 5.6E-49 1.2E-53 382.5 16.2 262 84-444 18-281 (864)
93 cd05632 STKc_GRK5 Catalytic do 100.0 2.1E-47 4.5E-52 373.2 27.5 281 85-454 1-284 (285)
94 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.3E-48 9.2E-53 378.7 21.2 263 83-436 4-288 (288)
95 cd07848 STKc_CDKL5 Catalytic d 100.0 1.1E-47 2.4E-52 375.1 23.8 264 84-436 1-287 (287)
96 KOG0658 Glycogen synthase kina 100.0 2.7E-49 5.9E-54 373.7 11.7 259 85-439 25-312 (364)
97 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.7E-48 1.4E-52 380.0 22.0 268 83-441 4-296 (303)
98 PHA03212 serine/threonine kina 100.0 3.6E-47 7.8E-52 387.1 27.0 263 80-440 88-383 (391)
99 cd05580 STKc_PKA Catalytic dom 100.0 9.9E-47 2.1E-51 369.3 27.7 265 84-445 1-266 (290)
100 PTZ00284 protein kinase; Provi 100.0 3.5E-47 7.5E-52 396.9 25.3 261 82-439 127-444 (467)
101 cd06649 PKc_MEK2 Catalytic dom 100.0 8.1E-47 1.8E-51 377.1 25.5 267 81-441 2-309 (331)
102 KOG0589 Serine/threonine prote 100.0 3.5E-48 7.6E-53 382.0 14.6 260 83-438 3-263 (426)
103 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.8E-47 1.9E-51 377.6 24.0 271 85-443 1-300 (338)
104 PTZ00036 glycogen synthase kin 100.0 6.9E-47 1.5E-51 390.9 22.6 267 80-442 62-360 (440)
105 cd07862 STKc_CDK6 Catalytic do 100.0 6.5E-47 1.4E-51 370.3 21.1 264 84-436 1-290 (290)
106 PLN00034 mitogen-activated pro 100.0 3.8E-46 8.1E-51 375.6 26.9 255 82-439 72-334 (353)
107 cd05609 STKc_MAST Catalytic do 100.0 1.6E-45 3.5E-50 363.4 29.9 290 84-450 1-290 (305)
108 PHA03207 serine/threonine kina 100.0 2E-46 4.3E-51 382.7 23.4 269 83-445 91-387 (392)
109 KOG0197 Tyrosine kinases [Sign 100.0 2.9E-47 6.3E-52 376.6 16.3 254 76-424 198-452 (468)
110 KOG0604 MAP kinase-activated p 100.0 1.8E-47 4E-52 350.5 13.0 257 82-439 59-328 (400)
111 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.2E-46 7E-51 373.8 23.0 261 79-424 2-325 (338)
112 KOG0579 Ste20-like serine/thre 100.0 1.1E-47 2.5E-52 380.8 12.0 262 84-442 32-298 (1187)
113 cd07876 STKc_JNK2 Catalytic do 100.0 5.2E-46 1.1E-50 375.4 23.2 262 83-438 20-320 (359)
114 cd07875 STKc_JNK1 Catalytic do 100.0 9.8E-46 2.1E-50 374.1 24.4 262 83-438 23-323 (364)
115 cd05577 STKc_GRK Catalytic dom 100.0 2.1E-45 4.6E-50 357.4 25.6 260 92-444 1-265 (277)
116 cd07853 STKc_NLK Catalytic dom 100.0 5.6E-46 1.2E-50 377.0 21.9 267 85-441 1-296 (372)
117 cd06650 PKc_MEK1 Catalytic dom 100.0 8.9E-46 1.9E-50 369.8 22.8 266 81-439 2-305 (333)
118 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.3E-46 1.8E-50 366.1 21.1 267 83-440 5-293 (309)
119 cd05610 STKc_MASTL Catalytic d 100.0 6.4E-45 1.4E-49 393.4 29.6 152 83-241 3-154 (669)
120 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-45 2.4E-50 361.1 20.3 262 85-436 1-288 (288)
121 cd07874 STKc_JNK3 Catalytic do 100.0 1.8E-45 3.8E-50 371.0 22.3 262 83-438 16-316 (355)
122 KOG0586 Serine/threonine prote 100.0 3.5E-46 7.6E-51 372.8 16.5 259 81-439 53-312 (596)
123 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.1E-45 4.5E-50 368.7 22.0 262 84-440 15-305 (343)
124 cd05061 PTKc_InsR Catalytic do 100.0 4.8E-45 1E-49 357.0 23.9 276 79-441 1-288 (288)
125 PTZ00267 NIMA-related protein 100.0 3.4E-45 7.3E-50 382.4 23.6 261 84-439 67-329 (478)
126 cd05633 STKc_GRK3 Catalytic do 100.0 6.6E-45 1.4E-49 354.5 23.2 258 91-444 1-266 (279)
127 PTZ00283 serine/threonine prot 100.0 3.8E-45 8.3E-50 382.5 22.9 264 82-439 30-303 (496)
128 cd05611 STKc_Rim15_like Cataly 100.0 1.5E-44 3.2E-49 347.8 25.2 258 90-442 2-260 (260)
129 PHA03209 serine/threonine kina 100.0 9.7E-45 2.1E-49 365.7 24.6 258 83-439 65-357 (357)
130 KOG0607 MAP kinase-interacting 100.0 9.9E-46 2.1E-50 341.6 15.6 263 90-442 84-370 (463)
131 cd07868 STKc_CDK8 Catalytic do 100.0 4.5E-45 9.7E-50 362.1 20.9 260 89-436 6-317 (317)
132 KOG0193 Serine/threonine prote 100.0 1.3E-45 2.7E-50 366.9 16.5 257 77-424 385-644 (678)
133 cd06625 STKc_MEKK3_like Cataly 100.0 3E-44 6.5E-49 346.0 25.5 260 84-436 2-263 (263)
134 KOG1989 ARK protein kinase fam 100.0 1.9E-45 4.2E-50 382.2 17.8 274 79-440 32-322 (738)
135 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-44 3E-49 360.3 23.3 272 88-440 2-314 (327)
136 KOG4721 Serine/threonine prote 100.0 2.7E-46 5.9E-51 367.6 10.6 250 75-433 115-364 (904)
137 PTZ00266 NIMA-related protein 100.0 1.1E-44 2.4E-49 391.6 23.4 267 78-441 7-303 (1021)
138 cd05572 STKc_cGK_PKG Catalytic 100.0 2.3E-44 5E-49 346.9 23.1 256 92-442 1-261 (262)
139 cd06644 STKc_STK10_LOK Catalyt 100.0 3.7E-44 8E-49 351.3 24.5 265 83-444 11-280 (292)
140 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.7E-44 3.7E-49 355.3 22.1 268 82-440 4-293 (301)
141 cd05606 STKc_beta_ARK Catalyti 100.0 3.2E-44 6.9E-49 349.4 23.7 261 91-447 1-269 (278)
142 PF00069 Pkinase: Protein kina 100.0 9.1E-45 2E-49 348.7 19.4 256 86-436 1-260 (260)
143 cd06615 PKc_MEK Catalytic doma 100.0 3.9E-44 8.5E-49 354.1 24.4 263 84-439 1-293 (308)
144 PHA03211 serine/threonine kina 100.0 2.9E-44 6.3E-49 370.7 24.3 260 83-438 168-460 (461)
145 cd08223 STKc_Nek4 Catalytic do 100.0 9E-44 1.9E-48 341.5 25.5 256 85-436 1-257 (257)
146 KOG0574 STE20-like serine/thre 100.0 5.7E-47 1.2E-51 347.1 2.9 258 84-440 33-290 (502)
147 cd08529 STKc_FA2-like Catalyti 100.0 1.1E-43 2.3E-48 340.6 25.4 256 85-436 1-256 (256)
148 KOG1026 Nerve growth factor re 100.0 3.8E-45 8.2E-50 378.3 16.3 259 80-424 482-753 (774)
149 cd06631 STKc_YSK4 Catalytic do 100.0 1.1E-43 2.5E-48 342.6 24.9 262 85-436 1-265 (265)
150 KOG0577 Serine/threonine prote 100.0 1.3E-45 2.9E-50 364.1 11.5 253 85-437 27-282 (948)
151 cd06611 STKc_SLK_like Catalyti 100.0 4.2E-44 9.1E-49 348.6 22.0 262 83-441 4-270 (280)
152 cd05579 STKc_MAST_like Catalyt 100.0 1.2E-43 2.7E-48 341.3 25.0 265 92-441 1-265 (265)
153 cd05106 PTKc_CSF-1R Catalytic 100.0 2.1E-44 4.5E-49 365.3 20.5 261 79-424 33-363 (374)
154 PHA02988 hypothetical protein; 100.0 5.2E-44 1.1E-48 348.9 22.4 240 90-426 26-272 (283)
155 cd06637 STKc_TNIK Catalytic do 100.0 5.8E-44 1.3E-48 345.9 21.7 256 83-436 5-272 (272)
156 cd05104 PTKc_Kit Catalytic dom 100.0 4.6E-44 9.9E-49 363.0 21.9 261 79-424 30-365 (375)
157 cd06619 PKc_MKK5 Catalytic dom 100.0 2.3E-44 5E-49 350.5 18.6 254 84-441 1-261 (279)
158 cd07861 STKc_CDK1_euk Catalyti 100.0 7.6E-44 1.6E-48 347.5 21.9 263 85-436 1-285 (285)
159 PHA03210 serine/threonine kina 100.0 8.4E-44 1.8E-48 373.4 23.8 277 82-444 146-465 (501)
160 cd05578 STKc_Yank1 Catalytic d 100.0 1.8E-43 4E-48 339.8 23.5 255 85-436 1-258 (258)
161 KOG0596 Dual specificity; seri 100.0 2.5E-44 5.4E-49 353.7 17.6 261 81-439 358-633 (677)
162 cd06645 STKc_MAP4K3 Catalytic 100.0 9.7E-44 2.1E-48 343.5 21.2 258 82-435 7-267 (267)
163 KOG0194 Protein tyrosine kinas 100.0 2.1E-44 4.5E-49 361.8 16.8 264 74-424 147-411 (474)
164 cd06654 STKc_PAK1 Catalytic do 100.0 2.7E-43 6E-48 346.0 23.8 258 83-439 19-276 (296)
165 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.3E-43 5E-48 343.8 23.0 257 82-436 14-282 (282)
166 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.9E-43 1.3E-47 337.9 25.1 261 85-436 1-267 (267)
167 cd06643 STKc_SLK Catalytic dom 100.0 3.6E-43 7.7E-48 342.5 23.8 259 85-440 6-269 (282)
168 cd05048 PTKc_Ror Catalytic Dom 100.0 2E-43 4.3E-48 344.3 21.9 263 81-433 2-279 (283)
169 cd06612 STKc_MST1_2 Catalytic 100.0 5.2E-43 1.1E-47 335.9 24.1 254 84-436 3-256 (256)
170 cd06655 STKc_PAK2 Catalytic do 100.0 4.5E-43 9.9E-48 344.5 24.1 257 84-439 19-275 (296)
171 KOG0666 Cyclin C-dependent kin 100.0 6.1E-45 1.3E-49 335.4 9.7 274 84-439 24-343 (438)
172 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.2E-43 9E-48 339.3 23.1 253 82-424 3-256 (266)
173 cd05105 PTKc_PDGFR_alpha Catal 100.0 3E-43 6.6E-48 358.7 23.2 261 79-424 32-388 (400)
174 cd06656 STKc_PAK3 Catalytic do 100.0 2.5E-43 5.4E-48 346.5 21.8 257 84-439 19-275 (297)
175 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.1E-43 1.1E-47 337.9 23.5 264 84-436 1-267 (267)
176 cd08221 STKc_Nek9 Catalytic do 100.0 9.1E-43 2E-47 334.4 25.0 256 85-436 1-256 (256)
177 cd08218 STKc_Nek1 Catalytic do 100.0 6E-43 1.3E-47 335.7 23.7 256 85-436 1-256 (256)
178 cd05096 PTKc_DDR1 Catalytic do 100.0 5.8E-43 1.3E-47 344.9 24.2 259 82-424 3-296 (304)
179 cd06646 STKc_MAP4K5 Catalytic 100.0 3.1E-43 6.7E-48 340.0 21.6 258 82-435 7-267 (267)
180 cd05054 PTKc_VEGFR Catalytic d 100.0 2.4E-43 5.2E-48 352.7 21.5 266 79-433 2-329 (337)
181 cd05583 STKc_MSK_N N-terminal 100.0 1.3E-42 2.8E-47 339.7 26.1 269 85-444 1-277 (288)
182 cd05581 STKc_PDK1 Catalytic do 100.0 1.2E-42 2.5E-47 337.7 25.3 279 84-436 1-280 (280)
183 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.8E-43 1E-47 341.8 22.6 263 84-436 1-286 (286)
184 cd07867 STKc_CDC2L6 Catalytic 100.0 3E-43 6.6E-48 348.8 21.5 260 89-436 6-317 (317)
185 cd08220 STKc_Nek8 Catalytic do 100.0 9.8E-43 2.1E-47 333.9 24.2 254 85-436 1-256 (256)
186 cd06651 STKc_MEKK3 Catalytic d 100.0 9.3E-43 2E-47 336.7 24.1 260 84-437 2-265 (266)
187 cd06652 STKc_MEKK2 Catalytic d 100.0 1.2E-42 2.5E-47 335.7 24.6 260 84-437 2-265 (265)
188 cd07839 STKc_CDK5 Catalytic do 100.0 2.8E-43 6.1E-48 343.4 20.4 262 85-436 1-284 (284)
189 cd05062 PTKc_IGF-1R Catalytic 100.0 7.3E-43 1.6E-47 339.5 23.2 264 80-433 2-274 (277)
190 cd06609 STKc_MST3_like Catalyt 100.0 7.3E-43 1.6E-47 338.8 23.0 258 84-440 1-258 (274)
191 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.5E-43 1.2E-47 341.8 22.1 257 84-440 1-269 (286)
192 cd06613 STKc_MAP4K3_like Catal 100.0 1.8E-42 3.8E-47 333.3 25.0 257 84-435 3-262 (262)
193 KOG0671 LAMMER dual specificit 100.0 1.9E-44 4.2E-49 341.3 10.9 263 82-439 87-412 (415)
194 PRK13184 pknD serine/threonine 100.0 8.5E-43 1.9E-47 375.6 25.1 271 84-426 2-282 (932)
195 cd05613 STKc_MSK1_N N-terminal 100.0 2.2E-42 4.8E-47 338.3 25.9 270 85-444 1-279 (290)
196 cd06630 STKc_MEKK1 Catalytic d 100.0 1.1E-42 2.4E-47 336.0 23.4 261 85-437 1-268 (268)
197 KOG4279 Serine/threonine prote 100.0 1.2E-43 2.7E-48 355.4 16.8 251 91-439 582-838 (1226)
198 KOG0983 Mitogen-activated prot 100.0 6.1E-44 1.3E-48 323.5 13.2 262 81-440 89-356 (391)
199 cd06639 STKc_myosinIIIB Cataly 100.0 2.3E-42 5.1E-47 338.3 25.6 259 82-437 20-291 (291)
200 cd07860 STKc_CDK2_3 Catalytic 100.0 5.8E-43 1.3E-47 341.2 21.2 263 85-436 1-284 (284)
201 cd06658 STKc_PAK5 Catalytic do 100.0 5.7E-43 1.2E-47 343.1 21.2 256 84-439 22-278 (292)
202 cd08219 STKc_Nek3 Catalytic do 100.0 1.4E-42 3.1E-47 333.0 23.2 251 85-432 1-251 (255)
203 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.6E-43 1E-47 342.1 20.0 263 84-436 1-286 (286)
204 KOG0662 Cyclin-dependent kinas 100.0 6.6E-44 1.4E-48 304.9 12.2 265 85-439 3-289 (292)
205 cd07845 STKc_CDK10 Catalytic d 100.0 9.2E-43 2E-47 344.3 22.3 269 82-440 5-297 (309)
206 cd05049 PTKc_Trk Catalytic dom 100.0 9.8E-43 2.1E-47 338.7 21.9 256 83-424 4-272 (280)
207 cd06638 STKc_myosinIIIA Cataly 100.0 2E-42 4.3E-47 337.8 24.1 258 82-436 16-286 (286)
208 cd07841 STKc_CDK7 Catalytic do 100.0 2.1E-42 4.6E-47 339.7 23.7 266 85-439 1-288 (298)
209 cd07844 STKc_PCTAIRE_like Cata 100.0 1.2E-42 2.6E-47 340.2 21.7 263 83-436 4-291 (291)
210 cd06608 STKc_myosinIII_like Ca 100.0 2E-42 4.4E-47 334.9 23.0 257 83-436 5-275 (275)
211 KOG4236 Serine/threonine prote 100.0 3.2E-44 6.9E-49 350.1 10.1 261 89-446 569-833 (888)
212 cd05072 PTKc_Lyn Catalytic dom 100.0 2.2E-42 4.8E-47 332.9 22.8 250 80-424 2-252 (261)
213 cd07832 STKc_CCRK Catalytic do 100.0 2.2E-42 4.9E-47 337.1 22.9 264 85-437 1-286 (286)
214 cd07850 STKc_JNK Catalytic dom 100.0 1.5E-42 3.2E-47 349.4 22.0 262 83-438 15-316 (353)
215 cd05052 PTKc_Abl Catalytic dom 100.0 3.9E-42 8.5E-47 331.7 24.0 251 80-424 2-253 (263)
216 cd06659 STKc_PAK6 Catalytic do 100.0 1.5E-42 3.3E-47 340.9 21.4 257 84-439 21-277 (297)
217 cd08225 STKc_Nek5 Catalytic do 100.0 5.1E-42 1.1E-46 329.1 24.4 256 85-436 1-257 (257)
218 cd05055 PTKc_PDGFR Catalytic d 100.0 3.7E-42 8.1E-47 339.0 24.0 261 79-424 30-292 (302)
219 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.7E-42 3.7E-47 338.2 21.1 256 82-438 3-271 (284)
220 PHA03390 pk1 serine/threonine- 100.0 3E-42 6.6E-47 333.5 22.6 245 84-438 14-267 (267)
221 cd05032 PTKc_InsR_like Catalyt 100.0 4.6E-42 1E-46 333.5 23.9 258 80-424 2-269 (277)
222 cd07849 STKc_ERK1_2_like Catal 100.0 2.5E-42 5.5E-47 345.4 22.7 267 84-440 5-299 (336)
223 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.4E-42 7.3E-47 330.7 22.7 246 83-424 3-249 (256)
224 cd08226 PK_STRAD_beta Pseudoki 100.0 1.1E-42 2.4E-47 346.8 19.8 271 90-441 4-316 (328)
225 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.9E-42 1.5E-46 331.5 24.7 260 85-436 2-272 (272)
226 cd06640 STKc_MST4 Catalytic do 100.0 2.2E-42 4.8E-47 336.1 21.1 258 84-441 4-261 (277)
227 KOG0584 Serine/threonine prote 100.0 1.7E-43 3.8E-48 353.9 13.5 253 87-439 43-302 (632)
228 cd06642 STKc_STK25-YSK1 Cataly 100.0 7.2E-43 1.6E-47 339.5 17.5 258 84-441 4-261 (277)
229 cd05090 PTKc_Ror1 Catalytic do 100.0 4.8E-42 1E-46 334.7 23.3 261 82-433 3-279 (283)
230 cd07837 STKc_CdkB_plant Cataly 100.0 3.5E-42 7.6E-47 337.5 22.2 265 84-437 1-295 (295)
231 cd05053 PTKc_FGFR Catalytic do 100.0 3.9E-42 8.5E-47 337.0 22.5 265 79-433 7-287 (293)
232 cd05091 PTKc_Ror2 Catalytic do 100.0 2.3E-42 5E-47 336.9 20.7 262 81-432 2-278 (283)
233 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.1E-41 2.4E-46 333.0 25.5 263 84-440 1-273 (287)
234 cd06605 PKc_MAPKK Catalytic do 100.0 2.3E-42 4.9E-47 333.3 20.3 256 84-439 1-263 (265)
235 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.4E-42 7.5E-47 335.4 21.8 260 84-442 1-270 (283)
236 cd06648 STKc_PAK_II Catalytic 100.0 1E-41 2.2E-46 333.1 25.1 256 85-439 20-275 (285)
237 cd06616 PKc_MKK4 Catalytic dom 100.0 1.4E-42 3.1E-47 339.2 18.9 265 84-443 4-277 (288)
238 cd07865 STKc_CDK9 Catalytic do 100.0 4.3E-42 9.2E-47 339.1 22.1 268 83-436 11-310 (310)
239 cd05094 PTKc_TrkC Catalytic do 100.0 9.8E-42 2.1E-46 334.1 24.4 256 83-425 4-274 (291)
240 cd05093 PTKc_TrkB Catalytic do 100.0 9.2E-42 2E-46 333.8 24.1 255 83-424 4-270 (288)
241 PLN00009 cyclin-dependent kina 100.0 4.5E-42 9.8E-47 336.8 21.6 268 84-440 2-291 (294)
242 cd06647 STKc_PAK_I Catalytic d 100.0 4.6E-42 1E-46 336.9 21.6 257 83-439 18-275 (293)
243 cd06626 STKc_MEKK4 Catalytic d 100.0 2E-41 4.4E-46 326.3 25.6 259 85-436 1-264 (264)
244 cd05068 PTKc_Frk_like Catalyti 100.0 1.1E-41 2.3E-46 328.2 23.6 250 80-424 2-252 (261)
245 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.8E-42 1.3E-46 343.7 22.4 266 79-433 2-335 (343)
246 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7.1E-42 1.5E-46 334.9 22.4 263 83-436 4-291 (291)
247 cd06624 STKc_ASK Catalytic dom 100.0 1.4E-41 3.1E-46 328.7 24.1 256 81-436 5-268 (268)
248 cd06632 STKc_MEKK1_plant Catal 100.0 1.4E-41 3E-46 326.1 23.8 255 85-436 1-258 (258)
249 cd08228 STKc_Nek6 Catalytic do 100.0 7.9E-42 1.7E-46 330.0 21.9 255 84-432 2-260 (267)
250 cd06623 PKc_MAPKK_plant_like C 100.0 1.3E-41 2.8E-46 327.5 23.4 259 84-440 1-263 (264)
251 cd05108 PTKc_EGFR Catalytic do 100.0 6.8E-42 1.5E-46 339.3 22.0 255 81-424 4-259 (316)
252 cd05033 PTKc_EphR Catalytic do 100.0 1.3E-41 2.9E-46 328.5 23.3 258 83-433 3-261 (266)
253 cd07843 STKc_CDC2L1 Catalytic 100.0 3.9E-42 8.5E-47 337.1 19.7 264 83-436 4-293 (293)
254 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-41 2.5E-46 332.5 22.9 264 84-436 1-288 (288)
255 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.9E-42 1.9E-46 347.8 22.7 261 79-424 32-390 (401)
256 cd08217 STKc_Nek2 Catalytic do 100.0 1.5E-41 3.2E-46 326.9 23.0 256 85-436 1-265 (265)
257 cd08229 STKc_Nek7 Catalytic do 100.0 1.6E-41 3.5E-46 327.8 23.3 251 84-424 2-256 (267)
258 cd06607 STKc_TAO Catalytic dom 100.0 1.4E-41 3.1E-46 335.5 23.2 257 82-438 13-272 (307)
259 cd05088 PTKc_Tie2 Catalytic do 100.0 8.3E-42 1.8E-46 336.7 21.4 257 81-433 4-276 (303)
260 cd05123 STKc_AGC Catalytic dom 100.0 3.8E-41 8.2E-46 321.7 25.0 250 92-436 1-250 (250)
261 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-41 2.7E-46 327.0 21.7 251 83-433 3-254 (256)
262 cd08216 PK_STRAD Pseudokinase 100.0 1.3E-41 2.9E-46 336.6 22.4 264 96-440 12-302 (314)
263 cd07831 STKc_MOK Catalytic dom 100.0 2E-41 4.4E-46 329.7 23.3 258 86-436 1-282 (282)
264 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.7E-41 3.8E-46 329.8 22.7 261 82-433 4-274 (277)
265 cd07842 STKc_CDK8_like Catalyt 100.0 7.2E-42 1.6E-46 338.6 20.2 269 85-436 1-316 (316)
266 cd06641 STKc_MST3 Catalytic do 100.0 1.4E-41 3E-46 330.6 21.8 255 85-439 5-259 (277)
267 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.1E-41 2.4E-46 327.9 20.7 249 81-424 3-252 (261)
268 cd05092 PTKc_TrkA Catalytic do 100.0 2.4E-41 5.2E-46 329.5 23.2 254 83-424 4-272 (280)
269 cd07880 STKc_p38gamma_MAPK12 C 100.0 8.6E-42 1.9E-46 342.5 20.7 263 83-440 14-305 (343)
270 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.5E-41 1.2E-45 323.9 25.5 259 84-436 2-264 (264)
271 KOG1187 Serine/threonine prote 100.0 4.3E-42 9.2E-47 342.8 18.1 258 82-427 73-346 (361)
272 cd07855 STKc_ERK5 Catalytic do 100.0 9.7E-42 2.1E-46 340.9 20.5 270 84-440 5-301 (334)
273 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.3E-41 7.2E-46 332.4 24.0 260 79-424 10-287 (304)
274 cd05071 PTKc_Src Catalytic dom 100.0 2.3E-41 5E-46 326.4 22.2 248 81-424 3-251 (262)
275 cd05046 PTK_CCK4 Pseudokinase 100.0 2.6E-41 5.6E-46 328.0 22.7 261 83-433 4-272 (275)
276 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.3E-41 5.1E-46 334.0 22.6 258 80-424 14-290 (307)
277 cd06917 STKc_NAK1_like Catalyt 100.0 1.4E-41 3.1E-46 330.1 20.8 257 85-440 2-262 (277)
278 cd07836 STKc_Pho85 Catalytic d 100.0 1.3E-41 2.9E-46 331.4 20.6 262 85-436 1-284 (284)
279 KOG2345 Serine/threonine prote 100.0 2.4E-42 5.2E-47 309.5 13.7 266 80-433 17-296 (302)
280 cd06614 STKc_PAK Catalytic dom 100.0 2.9E-41 6.3E-46 329.7 22.7 263 82-442 17-279 (286)
281 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.9E-41 4.1E-46 339.2 21.6 266 84-440 5-298 (337)
282 KOG1095 Protein tyrosine kinas 100.0 8.7E-42 1.9E-46 365.4 20.3 258 81-424 689-952 (1025)
283 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.4E-41 5.3E-46 325.5 21.3 250 79-424 1-251 (260)
284 cd08215 STKc_Nek Catalytic dom 100.0 6.5E-41 1.4E-45 320.9 24.1 256 85-436 1-258 (258)
285 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.9E-41 6.2E-46 338.9 22.4 262 83-439 16-306 (345)
286 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.2E-41 6.8E-46 324.7 21.8 249 80-424 2-251 (260)
287 cd07835 STKc_CDK1_like Catalyt 100.0 2.7E-41 5.8E-46 329.3 21.1 262 86-436 1-283 (283)
288 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.3E-41 1.4E-45 332.1 23.7 260 79-424 7-284 (314)
289 cd05059 PTKc_Tec_like Catalyti 100.0 3.2E-41 7E-46 324.0 20.8 250 83-432 3-253 (256)
290 cd07838 STKc_CDK4_6_like Catal 100.0 6.3E-41 1.4E-45 326.9 23.1 261 86-436 1-287 (287)
291 cd05035 PTKc_Axl_like Catalyti 100.0 5.3E-41 1.1E-45 325.0 22.4 255 86-432 1-267 (273)
292 cd05050 PTKc_Musk Catalytic do 100.0 5.8E-41 1.3E-45 328.0 22.9 258 81-424 2-280 (288)
293 KOG0669 Cyclin T-dependent kin 100.0 1.8E-43 3.9E-48 317.0 4.7 269 84-438 17-320 (376)
294 cd06633 STKc_TAO3 Catalytic do 100.0 1.1E-40 2.3E-45 330.3 24.9 257 84-440 21-280 (313)
295 cd07866 STKc_BUR1 Catalytic do 100.0 2.9E-41 6.3E-46 333.3 20.6 275 83-436 7-311 (311)
296 cd07851 STKc_p38 Catalytic dom 100.0 3.4E-41 7.4E-46 338.2 21.4 262 83-439 14-304 (343)
297 cd05082 PTKc_Csk Catalytic dom 100.0 5.8E-41 1.3E-45 322.1 22.2 244 80-424 2-247 (256)
298 cd05109 PTKc_HER2 Catalytic do 100.0 7.8E-41 1.7E-45 325.5 23.2 255 81-424 4-259 (279)
299 cd05051 PTKc_DDR Catalytic dom 100.0 7.5E-41 1.6E-45 328.3 23.3 258 82-424 3-288 (296)
300 cd05034 PTKc_Src_like Catalyti 100.0 7.6E-41 1.7E-45 322.0 22.8 251 79-424 1-252 (261)
301 cd05111 PTK_HER3 Pseudokinase 100.0 8.4E-41 1.8E-45 325.5 23.3 255 81-424 4-259 (279)
302 cd05045 PTKc_RET Catalytic dom 100.0 6.7E-41 1.5E-45 327.9 22.7 254 85-424 1-277 (290)
303 cd05084 PTKc_Fes Catalytic dom 100.0 7E-41 1.5E-45 320.7 22.2 242 90-424 1-244 (252)
304 cd07879 STKc_p38delta_MAPK13 C 100.0 4.3E-41 9.3E-46 337.3 21.7 267 78-441 10-305 (342)
305 cd06635 STKc_TAO1 Catalytic do 100.0 9.3E-41 2E-45 331.3 23.7 255 84-438 25-282 (317)
306 cd05066 PTKc_EphR_A Catalytic 100.0 9.8E-41 2.1E-45 322.7 23.2 254 83-424 3-257 (267)
307 cd05089 PTKc_Tie1 Catalytic do 100.0 7.7E-41 1.7E-45 328.7 22.8 249 84-424 2-266 (297)
308 cd06657 STKc_PAK4 Catalytic do 100.0 6E-41 1.3E-45 328.8 22.0 251 89-439 25-276 (292)
309 cd07834 STKc_MAPK Catalytic do 100.0 2.8E-41 6.1E-46 336.8 19.9 268 85-440 1-296 (330)
310 cd05100 PTKc_FGFR3 Catalytic d 100.0 8.1E-41 1.8E-45 334.2 23.2 266 78-433 6-289 (334)
311 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-40 2.3E-45 320.6 23.1 244 91-424 2-246 (257)
312 cd05039 PTKc_Csk_like Catalyti 100.0 1.6E-40 3.6E-45 318.9 24.3 243 81-424 3-247 (256)
313 cd05069 PTKc_Yes Catalytic dom 100.0 9.1E-41 2E-45 321.7 22.4 249 80-424 2-251 (260)
314 cd06627 STKc_Cdc7_like Catalyt 100.0 1.9E-40 4E-45 317.4 24.3 254 85-436 1-254 (254)
315 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.6E-40 3.5E-45 320.6 23.9 251 84-424 2-256 (267)
316 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.8E-41 1.2E-45 336.4 21.4 266 84-440 5-307 (342)
317 cd06618 PKc_MKK7 Catalytic dom 100.0 1.8E-40 3.8E-45 326.0 24.3 262 79-439 10-279 (296)
318 cd05073 PTKc_Hck Catalytic dom 100.0 2.2E-40 4.7E-45 319.0 24.5 250 79-424 1-251 (260)
319 cd05075 PTKc_Axl Catalytic dom 100.0 1.1E-40 2.4E-45 323.0 21.9 255 86-432 1-266 (272)
320 KOG0603 Ribosomal protein S6 k 100.0 8.4E-42 1.8E-46 343.2 14.4 244 82-436 320-566 (612)
321 cd06606 STKc_MAPKKK Catalytic 100.0 3.3E-40 7.1E-45 315.9 24.8 257 85-436 1-260 (260)
322 cd05122 PKc_STE Catalytic doma 100.0 3.5E-40 7.6E-45 314.4 24.8 253 85-435 1-253 (253)
323 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.3E-40 5E-45 320.1 23.7 256 81-424 2-258 (268)
324 cd05040 PTKc_Ack_like Catalyti 100.0 2.5E-40 5.3E-45 317.7 23.7 248 90-424 1-249 (257)
325 cd00192 PTKc Catalytic domain 100.0 2.4E-40 5.3E-45 317.6 23.5 252 90-433 1-260 (262)
326 cd05097 PTKc_DDR_like Catalyti 100.0 1.7E-40 3.7E-45 326.0 22.6 259 82-424 3-287 (295)
327 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-40 3.3E-45 331.9 22.5 270 85-439 1-298 (332)
328 PTZ00024 cyclin-dependent prot 100.0 9.9E-41 2.2E-45 333.6 21.2 281 84-440 8-320 (335)
329 cd08530 STKc_CNK2-like Catalyt 100.0 3.8E-40 8.2E-45 315.8 24.3 254 85-436 1-256 (256)
330 cd08222 STKc_Nek11 Catalytic d 100.0 1.4E-40 3.1E-45 320.1 21.3 256 85-436 1-260 (260)
331 cd05115 PTKc_Zap-70 Catalytic 100.0 3.1E-40 6.8E-45 317.6 23.5 244 91-424 2-246 (257)
332 cd07864 STKc_CDK12 Catalytic d 100.0 9.9E-41 2.2E-45 328.4 20.2 268 80-436 3-302 (302)
333 cd05060 PTKc_Syk_like Catalyti 100.0 2.6E-40 5.6E-45 317.8 22.6 245 90-424 1-246 (257)
334 cd05095 PTKc_DDR2 Catalytic do 100.0 3.6E-40 7.7E-45 323.8 24.1 258 82-424 3-288 (296)
335 cd06634 STKc_TAO2 Catalytic do 100.0 1.8E-40 3.8E-45 328.0 22.0 256 84-439 15-273 (308)
336 cd05065 PTKc_EphR_B Catalytic 100.0 2.8E-40 6.1E-45 319.8 22.9 256 83-424 3-259 (269)
337 cd07840 STKc_CDK9_like Catalyt 100.0 1.6E-40 3.5E-45 323.8 21.3 262 86-436 1-287 (287)
338 cd07830 STKc_MAK_like Catalyti 100.0 2.9E-40 6.2E-45 321.9 22.9 260 86-436 1-283 (283)
339 cd05118 STKc_CMGC Catalytic do 100.0 2E-40 4.4E-45 322.7 21.1 261 86-436 1-283 (283)
340 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.5E-40 5.5E-45 329.7 22.3 262 82-438 8-293 (328)
341 PF07714 Pkinase_Tyr: Protein 100.0 6.6E-41 1.4E-45 322.7 17.3 251 87-424 2-253 (259)
342 KOG1035 eIF-2alpha kinase GCN2 100.0 3.1E-41 6.7E-46 357.7 15.7 275 83-437 478-875 (1351)
343 KOG4645 MAPKKK (MAP kinase kin 100.0 1.2E-42 2.6E-47 370.0 4.9 259 85-438 1236-1499(1509)
344 cd05083 PTKc_Chk Catalytic dom 100.0 3.7E-40 8.1E-45 316.1 21.6 241 82-424 4-245 (254)
345 cd05042 PTKc_Aatyk Catalytic d 100.0 5.8E-40 1.3E-44 317.6 23.0 249 90-424 1-261 (269)
346 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.2E-40 1.6E-44 319.4 23.5 253 84-424 3-272 (283)
347 cd05057 PTKc_EGFR_like Catalyt 100.0 8.8E-40 1.9E-44 318.1 24.0 255 81-424 4-259 (279)
348 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1E-39 2.2E-44 315.9 23.7 249 90-424 1-261 (269)
349 cd07852 STKc_MAPK15 Catalytic 100.0 2.3E-40 4.9E-45 331.4 19.7 270 83-439 6-301 (337)
350 cd05112 PTKc_Itk Catalytic dom 100.0 7.3E-40 1.6E-44 314.3 22.2 250 83-432 3-253 (256)
351 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.8E-40 6E-45 318.0 19.2 243 90-432 1-255 (258)
352 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 8.4E-40 1.8E-44 319.2 22.8 258 85-432 5-278 (284)
353 cd05576 STKc_RPK118_like Catal 100.0 3.5E-40 7.6E-45 313.4 19.6 233 95-436 4-237 (237)
354 cd07829 STKc_CDK_like Catalyti 100.0 5.1E-40 1.1E-44 319.7 20.9 261 86-436 1-282 (282)
355 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.2E-40 1.8E-44 315.6 22.1 244 90-433 1-260 (262)
356 cd05085 PTKc_Fer Catalytic dom 100.0 1.3E-39 2.9E-44 311.3 23.0 240 90-424 1-242 (250)
357 cd05056 PTKc_FAK Catalytic dom 100.0 1.6E-39 3.4E-44 314.7 23.4 253 81-424 3-256 (270)
358 KOG4250 TANK binding protein k 100.0 1.7E-40 3.6E-45 336.4 16.7 248 85-421 14-296 (732)
359 cd05047 PTKc_Tie Catalytic dom 100.0 1.1E-39 2.5E-44 315.9 21.9 242 91-424 2-259 (270)
360 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-39 2.8E-44 316.4 22.3 243 91-433 2-272 (274)
361 cd05043 PTK_Ryk Pseudokinase d 100.0 1.7E-39 3.7E-44 316.2 23.0 257 81-424 3-267 (280)
362 cd05058 PTKc_Met_Ron Catalytic 100.0 2.1E-39 4.5E-44 312.2 22.8 248 90-424 1-250 (262)
363 cd05110 PTKc_HER4 Catalytic do 100.0 1.8E-39 3.9E-44 320.0 22.1 255 82-425 5-260 (303)
364 smart00219 TyrKc Tyrosine kina 100.0 2.3E-39 4.9E-44 310.6 22.3 255 86-432 1-256 (258)
365 cd05044 PTKc_c-ros Catalytic d 100.0 1.1E-39 2.4E-44 315.3 19.7 248 90-424 1-261 (269)
366 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.1E-39 8.9E-44 311.7 23.5 248 91-424 2-260 (268)
367 KOG4257 Focal adhesion tyrosin 100.0 3.2E-40 7E-45 327.8 15.8 255 80-424 385-640 (974)
368 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.7E-39 5.8E-44 310.6 21.9 241 90-432 1-256 (259)
369 PHA02882 putative serine/threo 100.0 5.2E-39 1.1E-43 315.4 23.9 258 81-424 9-287 (294)
370 KOG0587 Traf2- and Nck-interac 100.0 8E-40 1.7E-44 337.3 18.5 261 80-437 15-286 (953)
371 cd05041 PTKc_Fes_like Catalyti 100.0 5.6E-39 1.2E-43 307.2 22.3 246 90-432 1-247 (251)
372 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 9.3E-39 2E-43 311.6 23.5 254 84-424 4-274 (284)
373 KOG0665 Jun-N-terminal kinase 100.0 9E-41 2E-45 309.5 8.8 274 83-453 16-328 (369)
374 KOG0670 U4/U6-associated splic 100.0 2.9E-40 6.2E-45 322.4 12.6 266 79-438 427-751 (752)
375 KOG1151 Tousled-like protein k 100.0 2E-40 4.2E-45 317.9 11.3 268 82-438 461-746 (775)
376 KOG1094 Discoidin domain recep 100.0 1.3E-39 2.8E-44 321.8 16.2 255 80-424 534-795 (807)
377 cd08528 STKc_Nek10 Catalytic d 100.0 8.8E-39 1.9E-43 309.2 21.5 250 85-424 1-261 (269)
378 cd05074 PTKc_Tyro3 Catalytic d 100.0 7.9E-39 1.7E-43 310.1 21.0 251 86-424 1-263 (273)
379 KOG0199 ACK and related non-re 100.0 4.5E-40 9.7E-45 330.5 12.5 256 81-424 107-363 (1039)
380 KOG4278 Protein tyrosine kinas 100.0 2.6E-39 5.6E-44 320.9 17.0 253 77-424 260-514 (1157)
381 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.7E-38 3.7E-43 309.2 22.3 255 84-424 4-274 (284)
382 PLN03225 Serine/threonine-prot 100.0 8.4E-39 1.8E-43 337.9 21.2 274 79-443 127-460 (566)
383 KOG1290 Serine/threonine prote 100.0 1.2E-37 2.7E-42 302.5 26.1 135 83-227 77-224 (590)
384 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-39 2.7E-44 331.3 11.7 261 74-424 619-882 (996)
385 KOG1006 Mitogen-activated prot 100.0 2.5E-40 5.5E-45 299.0 4.2 266 81-440 61-334 (361)
386 PLN03224 probable serine/threo 100.0 4.1E-37 8.8E-42 317.6 25.2 272 79-438 140-505 (507)
387 KOG0668 Casein kinase II, alph 100.0 1.2E-38 2.6E-43 282.3 10.5 260 82-440 36-329 (338)
388 KOG0664 Nemo-like MAPK-related 100.0 1E-38 2.3E-43 289.3 5.8 266 84-439 53-349 (449)
389 KOG1027 Serine/threonine prote 100.0 5.1E-38 1.1E-42 322.6 11.2 250 86-436 511-770 (903)
390 smart00220 S_TKc Serine/Threon 100.0 9.3E-36 2E-40 281.8 22.6 243 96-436 1-244 (244)
391 KOG1152 Signal transduction se 100.0 3.3E-37 7.1E-42 304.5 12.0 202 83-371 560-771 (772)
392 KOG1167 Serine/threonine prote 100.0 6.1E-37 1.3E-41 294.1 10.7 300 83-440 35-388 (418)
393 KOG0576 Mitogen-activated prot 100.0 8.1E-37 1.8E-41 306.3 7.2 261 83-439 14-277 (829)
394 KOG0200 Fibroblast/platelet-de 100.0 5.7E-35 1.2E-39 311.6 21.5 262 78-427 290-573 (609)
395 PLN00113 leucine-rich repeat r 100.0 1.6E-35 3.5E-40 335.6 18.2 241 84-424 690-942 (968)
396 KOG2052 Activin A type IB rece 100.0 6.5E-35 1.4E-39 281.1 18.3 248 83-424 210-494 (513)
397 KOG3653 Transforming growth fa 100.0 5.5E-35 1.2E-39 283.5 15.9 247 82-424 208-494 (534)
398 KOG0984 Mitogen-activated prot 100.0 5.6E-35 1.2E-39 255.4 12.3 218 80-385 42-269 (282)
399 KOG1025 Epidermal growth facto 100.0 5.5E-35 1.2E-39 298.6 13.5 252 85-425 697-949 (1177)
400 KOG1024 Receptor-like protein 100.0 8E-32 1.7E-36 255.5 18.8 259 80-424 280-546 (563)
401 KOG0603 Ribosomal protein S6 k 100.0 4.3E-34 9.3E-39 287.7 3.6 264 91-456 1-268 (612)
402 PLN00181 protein SPA1-RELATED; 100.0 2.2E-32 4.8E-37 302.5 10.3 235 146-439 29-271 (793)
403 smart00221 STYKc Protein kinas 100.0 1.5E-30 3.3E-35 243.7 20.8 215 86-385 1-218 (225)
404 cd00180 PKc Catalytic domain o 100.0 4.2E-30 9E-35 237.0 20.5 213 92-434 1-215 (215)
405 KOG1345 Serine/threonine kinas 100.0 1.7E-31 3.7E-36 242.5 10.2 238 84-420 24-275 (378)
406 KOG0606 Microtubule-associated 100.0 1.4E-31 3E-36 281.7 10.7 256 83-455 82-337 (1205)
407 KOG0590 Checkpoint kinase and 100.0 2.9E-30 6.3E-35 272.2 7.3 274 87-444 321-596 (601)
408 smart00750 KIND kinase non-cat 100.0 6E-29 1.3E-33 224.8 13.2 168 174-437 1-169 (176)
409 KOG1165 Casein kinase (serine/ 100.0 2.9E-28 6.4E-33 227.3 14.4 218 84-384 28-254 (449)
410 COG0515 SPS1 Serine/threonine 100.0 1.8E-26 3.9E-31 227.0 24.3 268 86-438 2-280 (384)
411 KOG1164 Casein kinase (serine/ 99.9 1.3E-26 2.9E-31 230.0 19.9 258 85-424 19-288 (322)
412 KOG1163 Casein kinase (serine/ 99.9 3.5E-27 7.7E-32 211.1 11.9 224 81-387 12-242 (341)
413 PRK09188 serine/threonine prot 99.9 5.5E-27 1.2E-31 232.7 13.9 144 81-241 15-162 (365)
414 PRK10359 lipopolysaccharide co 99.9 2.3E-24 5E-29 199.4 11.3 139 82-238 29-181 (232)
415 cd05147 RIO1_euk RIO kinase fa 99.9 2.7E-24 5.8E-29 196.4 10.3 141 89-240 2-166 (190)
416 KOG1240 Protein kinase contain 99.9 3.3E-25 7.1E-30 234.0 4.6 243 85-433 24-291 (1431)
417 PRK12274 serine/threonine prot 99.9 2.4E-23 5.3E-28 188.6 15.1 203 87-374 5-212 (218)
418 KOG0606 Microtubule-associated 99.9 3.2E-24 6.9E-29 226.5 7.5 314 81-455 801-1114(1205)
419 cd05145 RIO1_like RIO kinase f 99.9 4.8E-23 1E-27 188.7 13.8 143 89-242 2-168 (190)
420 PF14531 Kinase-like: Kinase-l 99.9 2.4E-23 5.2E-28 198.3 9.9 236 85-420 13-288 (288)
421 KOG4158 BRPK/PTEN-induced prot 99.9 2.2E-23 4.8E-28 198.9 9.0 203 147-433 274-513 (598)
422 KOG0195 Integrin-linked kinase 99.9 4.9E-23 1.1E-27 187.5 9.2 241 82-424 188-437 (448)
423 PRK10345 hypothetical protein; 99.9 1.1E-21 2.3E-26 181.0 12.3 135 89-239 7-157 (210)
424 KOG1166 Mitotic checkpoint ser 99.8 3.2E-21 7E-26 207.7 11.1 198 80-367 694-901 (974)
425 smart00090 RIO RIO-like kinase 99.8 1E-20 2.2E-25 178.7 11.6 146 85-242 29-199 (237)
426 KOG1033 eIF-2alpha kinase PEK/ 99.8 8.6E-22 1.9E-26 195.5 3.6 185 162-436 329-515 (516)
427 PRK14879 serine/threonine prot 99.8 1.3E-19 2.8E-24 168.8 14.6 136 90-239 2-142 (211)
428 KOG0590 Checkpoint kinase and 99.8 9.5E-22 2E-26 207.8 -1.0 264 84-438 20-291 (601)
429 TIGR03724 arch_bud32 Kae1-asso 99.8 2.8E-19 6.2E-24 165.0 12.9 133 91-240 1-138 (199)
430 PRK09605 bifunctional UGMP fam 99.8 3E-19 6.6E-24 189.1 14.5 139 84-240 333-476 (535)
431 cd05144 RIO2_C RIO kinase fami 99.8 2.2E-19 4.9E-24 165.6 11.0 140 85-242 16-176 (198)
432 KOG1023 Natriuretic peptide re 99.8 3.6E-18 7.8E-23 173.0 13.6 201 143-424 1-215 (484)
433 cd05119 RIO RIO kinase family, 99.8 4.2E-18 9E-23 155.5 10.6 139 89-242 2-165 (187)
434 PRK01723 3-deoxy-D-manno-octul 99.7 2.4E-17 5.2E-22 156.1 13.4 137 90-240 37-191 (239)
435 cd05120 APH_ChoK_like Aminogly 99.7 8.1E-17 1.7E-21 140.7 10.1 133 88-241 2-139 (155)
436 PRK04750 ubiB putative ubiquin 99.6 5.4E-15 1.2E-19 153.7 8.5 144 84-242 120-315 (537)
437 TIGR01982 UbiB 2-polyprenylphe 99.5 3.1E-14 6.7E-19 146.3 12.5 141 90-242 123-308 (437)
438 KOG0601 Cyclin-dependent kinas 99.5 6.8E-15 1.5E-19 149.3 6.4 262 84-439 114-385 (524)
439 KOG0601 Cyclin-dependent kinas 99.5 7.7E-15 1.7E-19 149.0 5.4 251 82-436 263-517 (524)
440 KOG1266 Protein kinase [Signal 99.5 6.5E-14 1.4E-18 131.7 8.6 208 143-440 121-338 (458)
441 cd05151 ChoK Choline Kinase (C 99.5 1.2E-13 2.6E-18 123.8 9.5 127 89-239 3-135 (170)
442 KOG1243 Protein kinase [Genera 99.4 8.6E-13 1.9E-17 135.4 13.9 116 113-238 36-152 (690)
443 cd05146 RIO3_euk RIO kinase fa 99.4 8.6E-12 1.9E-16 113.3 12.6 143 90-239 3-172 (197)
444 COG3642 Mn2+-dependent serine/ 99.3 3.1E-11 6.8E-16 106.0 11.4 132 91-239 3-139 (204)
445 KOG3087 Serine/threonine prote 99.3 6.2E-11 1.3E-15 103.6 11.8 144 88-238 11-163 (229)
446 cd05154 ACAD10_11_like Acyl-Co 99.2 4.2E-11 9.1E-16 112.0 9.3 139 90-239 4-205 (223)
447 PRK15123 lipopolysaccharide co 99.1 7.5E-10 1.6E-14 106.2 14.3 135 98-239 36-193 (268)
448 KOG2137 Protein kinase [Signal 99.1 1.7E-10 3.6E-15 119.3 6.0 174 197-448 105-280 (700)
449 PF01163 RIO1: RIO1 family; I 99.0 1.2E-09 2.6E-14 98.9 10.1 127 99-240 1-155 (188)
450 KOG3741 Poly(A) ribonuclease s 98.9 1.2E-08 2.5E-13 102.4 13.8 133 98-238 290-440 (655)
451 PF06293 Kdo: Lipopolysacchari 98.9 3.1E-08 6.8E-13 91.7 13.5 125 113-239 31-169 (206)
452 COG0478 RIO-like serine/threon 98.7 7.1E-08 1.5E-12 90.0 10.9 136 86-238 93-249 (304)
453 PRK09902 hypothetical protein; 98.7 1.1E-07 2.3E-12 86.8 11.1 138 93-238 27-177 (216)
454 PF06176 WaaY: Lipopolysacchar 98.7 7.6E-07 1.6E-11 81.6 14.7 140 81-238 28-181 (229)
455 COG4248 Uncharacterized protei 98.6 4.6E-07 9.9E-12 89.0 13.1 193 86-372 13-225 (637)
456 KOG0576 Mitogen-activated prot 98.6 6E-09 1.3E-13 106.8 -1.5 246 85-439 243-490 (829)
457 COG0661 AarF Predicted unusual 98.4 2.1E-06 4.4E-11 89.4 12.0 143 90-242 131-316 (517)
458 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 1.9E-06 4E-11 81.0 10.6 134 90-238 7-180 (226)
459 COG1718 RIO1 Serine/threonine 98.4 1.1E-06 2.5E-11 81.3 8.4 135 91-239 55-214 (268)
460 PF01636 APH: Phosphotransfera 98.3 5E-06 1.1E-10 78.0 12.2 139 89-239 2-196 (239)
461 KOG1035 eIF-2alpha kinase GCN2 98.3 4.3E-06 9.3E-11 91.7 11.7 206 134-442 227-443 (1351)
462 PF13095 FTA2: Kinetochore Sim 98.3 8.3E-06 1.8E-10 74.0 11.0 128 84-238 37-206 (207)
463 cd05150 APH Aminoglycoside 3'- 98.3 6.9E-06 1.5E-10 78.1 10.9 136 91-239 5-192 (244)
464 PLN02876 acyl-CoA dehydrogenas 98.2 9.6E-06 2.1E-10 90.6 11.3 83 88-175 42-130 (822)
465 KOG1235 Predicted unusual prot 98.1 1.8E-05 3.9E-10 82.2 10.8 140 90-240 167-354 (538)
466 PF10707 YrbL-PhoP_reg: PhoP r 98.1 5.7E-05 1.2E-09 69.1 12.6 134 90-238 7-170 (199)
467 cd05155 APH_ChoK_like_1 Unchar 98.0 3.8E-05 8.2E-10 72.6 10.1 29 211-239 165-193 (235)
468 PF12260 PIP49_C: Protein-kina 98.0 2.3E-05 5.1E-10 71.2 7.6 96 138-239 8-110 (188)
469 COG2112 Predicted Ser/Thr prot 97.9 2.9E-05 6.3E-10 68.2 7.1 129 86-239 24-154 (201)
470 KOG1826 Ras GTPase activating 97.8 4.9E-06 1.1E-10 93.2 0.5 156 137-370 1277-1441(2724)
471 cd05157 ETNK_euk Ethanolamine 97.8 0.00022 4.7E-09 67.3 10.7 76 89-176 3-79 (235)
472 PRK10593 hypothetical protein; 97.7 0.00027 6E-09 69.2 11.5 80 85-176 15-100 (297)
473 cd05153 HomoserineK_II Homoser 97.7 0.00019 4.2E-09 70.2 9.5 141 85-238 15-203 (296)
474 PRK09550 mtnK methylthioribose 97.6 0.00056 1.2E-08 69.3 11.6 81 88-175 30-117 (401)
475 TIGR00938 thrB_alt homoserine 97.6 0.00076 1.6E-08 66.5 12.2 143 83-238 21-215 (307)
476 TIGR02721 ycfN_thiK thiamine k 97.6 0.00029 6.3E-09 67.5 8.7 134 91-239 3-174 (256)
477 KOG2268 Serine/threonine prote 97.5 0.00016 3.5E-09 69.5 5.4 134 86-237 94-248 (465)
478 cd05156 ChoK_euk Choline Kinas 97.3 0.00092 2E-08 65.7 9.3 80 89-176 3-84 (302)
479 PRK05231 homoserine kinase; Pr 97.2 0.0048 1E-07 61.1 13.1 29 210-238 187-215 (319)
480 PLN02236 choline kinase 97.0 0.0045 9.8E-08 62.0 10.5 145 86-239 38-230 (344)
481 cd05152 MPH2' Macrolide 2'-Pho 97.0 0.0066 1.4E-07 58.8 10.9 29 211-239 186-215 (276)
482 KOG1093 Predicted protein kina 96.9 0.00098 2.1E-08 67.9 4.3 88 348-439 110-200 (725)
483 TIGR02906 spore_CotS spore coa 96.9 0.01 2.3E-07 58.4 11.5 28 210-238 187-214 (313)
484 KOG2270 Serine/threonine prote 96.7 0.011 2.3E-07 58.3 9.7 138 90-238 150-311 (520)
485 COG5072 ALK1 Serine/threonine 96.7 0.0035 7.6E-08 61.5 6.2 72 160-239 297-369 (488)
486 TIGR01767 MTRK 5-methylthiorib 96.6 0.014 2.9E-07 58.2 10.1 76 91-173 2-84 (370)
487 PLN02756 S-methyl-5-thioribose 96.6 0.016 3.5E-07 58.7 10.5 77 88-173 36-119 (418)
488 PLN02421 phosphotransferase, a 96.5 0.014 3.1E-07 58.1 9.7 144 84-238 15-211 (330)
489 PF01633 Choline_kinase: Choli 96.3 0.0073 1.6E-07 56.0 5.7 29 211-239 144-173 (211)
490 PRK12396 5-methylribose kinase 96.0 0.029 6.2E-07 56.6 8.7 79 88-173 33-117 (409)
491 TIGR02904 spore_ysxE spore coa 95.8 0.083 1.8E-06 52.1 11.0 29 211-239 197-225 (309)
492 PTZ00384 choline kinase; Provi 95.7 0.036 7.7E-07 56.3 8.0 84 84-176 51-136 (383)
493 COG3173 Predicted aminoglycosi 95.2 0.14 3.1E-06 50.3 9.8 31 211-241 199-229 (321)
494 PF03881 Fructosamin_kin: Fruc 94.9 0.045 9.8E-07 53.2 5.7 76 86-174 19-97 (288)
495 PRK06148 hypothetical protein; 94.9 0.33 7.1E-06 55.8 13.2 30 210-239 203-235 (1013)
496 PTZ00296 choline kinase; Provi 94.9 0.26 5.6E-06 51.0 11.3 86 82-176 104-193 (442)
497 PF07387 Seadorna_VP7: Seadorn 94.3 0.13 2.8E-06 47.4 6.5 82 137-237 106-189 (308)
498 COG3001 Uncharacterized protei 94.0 1.2 2.6E-05 41.5 12.0 79 85-176 17-98 (286)
499 KOG1033 eIF-2alpha kinase PEK/ 93.6 0.018 4E-07 58.8 -0.3 96 56-161 24-119 (516)
500 KOG1236 Predicted unusual prot 93.4 0.18 3.8E-06 50.7 6.1 62 163-227 319-381 (565)
No 1
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-70 Score=523.79 Aligned_cols=369 Identities=62% Similarity=1.076 Sum_probs=309.1
Q ss_pred cCCCCCCccHHHHHHHHHHH-hhcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHH
Q 011302 56 NSHKPHKANQAAWEAMKRLR-RAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH 134 (489)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~ 134 (489)
...+++..+...|+++..++ .....+.+++|++++.||+|.-|+||+|+.++ +.+.+|+|++.++.+..++++.
T Consensus 48 ~~~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~-----t~~~fAmKVmdK~~l~~rkKl~ 122 (459)
T KOG0610|consen 48 SGNKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRG-----TNCLFAMKVMDKESLASRKKLK 122 (459)
T ss_pred ccCCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecC-----CCceEEEEEecHHHHhhhhHHH
Confidence 34567777777888888776 46677899999999999999999999999998 5689999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCcccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCee
Q 011302 135 RADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVY 214 (489)
Q Consensus 135 ~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiH 214 (489)
++..|.+||+.++||+++.||+.|+.++..|||||||+||+|+.++++++++.|++..+++|+.+++.||+|||-.|||+
T Consensus 123 Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivY 202 (459)
T KOG0610|consen 123 RAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVY 202 (459)
T ss_pred HHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCcccccccccccccccccccc
Q 011302 215 RDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVT 294 (489)
Q Consensus 215 rDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (489)
||||||||||.++|++-|+||.++..+...|....+.-... ....++|.. ...+||.........+++...
T Consensus 203 RDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~------~~~~~~~~~---~~~s~f~~r~~~~~~~~~k~~ 273 (459)
T KOG0610|consen 203 RDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRS------SGSQPSCRS---RQPSCFSPRCLSSSKKRKKKD 273 (459)
T ss_pred ccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCC------CCCCccccc---ccccccccchhcccccccccc
Confidence 99999999999999999999999999876665543311100 001222222 223455443222111111000
Q ss_pred ccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCc
Q 011302 295 VTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 374 (489)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~ 374 (489)
. ... ..-....+++.+.+..+++||-.|+|||+|.|.+++.++|||+|||+|||||+|.+||.|.+.
T Consensus 274 ~------------~~~-~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~ 340 (459)
T KOG0610|consen 274 E------------SAS-RSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN 340 (459)
T ss_pred c------------ccc-ccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc
Confidence 0 000 122234456778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCC
Q 011302 375 EKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPN 454 (489)
Q Consensus 375 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~ 454 (489)
.+++.+|+..++.||...... ..++|||+++|.+||.+|++...+++||++||||++++|..++...||++|.
T Consensus 341 ~~Tl~NIv~~~l~Fp~~~~vs-------~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~ 413 (459)
T KOG0610|consen 341 KETLRNIVGQPLKFPEEPEVS-------SAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPK 413 (459)
T ss_pred hhhHHHHhcCCCcCCCCCcch-------hHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCC
Confidence 999999999999999765332 2589999999999999999998889999999999999999999999999988
Q ss_pred cccc
Q 011302 455 NDLY 458 (489)
Q Consensus 455 ~~~~ 458 (489)
....
T Consensus 414 ~~d~ 417 (459)
T KOG0610|consen 414 PVDG 417 (459)
T ss_pred cccc
Confidence 6443
No 2
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=8.2e-67 Score=512.51 Aligned_cols=349 Identities=36% Similarity=0.628 Sum_probs=271.7
Q ss_pred HHhhcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccc
Q 011302 74 LRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPT 153 (489)
Q Consensus 74 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 153 (489)
++....+++.++|.++..||+|+||.||+|+.++ ++.+||+|++++..+..++++..+..|..+|...++|+||+
T Consensus 131 lR~~R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~-----Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVK 205 (550)
T KOG0605|consen 131 LRLRRTRLSLDDFELLKVIGKGAFGEVRLARKKD-----TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVK 205 (550)
T ss_pred HHhccccCCcccchhheeeccccceeEEEEEEcc-----CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEE
Confidence 4455567889999999999999999999999998 78999999999999999999999999999999999999999
Q ss_pred ccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEc
Q 011302 154 LYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 154 l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
||..|++.+++||||||++|||+..+|.+. +.|++..+++|+.+++.|++.||..|+|||||||+|+|||..||+||+
T Consensus 206 LyYsFQD~~~LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLS 283 (550)
T KOG0605|consen 206 LYYSFQDKEYLYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLS 283 (550)
T ss_pred EEEEecCCCeeEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeec
Confidence 999999999999999999999999999887 789999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
||||++-+.-... ...+. ...++...++.... ....... ....+. ++ ..
T Consensus 284 DFGLs~gl~~~~~----------~~~~~------~~~~~~~~~~~~~~-~~~~~~~--~~~~~~----------~~--~~ 332 (550)
T KOG0605|consen 284 DFGLSTGLDKKHR----------IESYR------LDEQMQINLSEAKP-SDFPKFN--TPRSTM----------SR--RE 332 (550)
T ss_pred cccccchhhhhhh----------hhhhc------chhhhhhhhccCCC-ccccccc--cccchh----------hH--HH
Confidence 9999843321100 00000 00000000000000 0000000 000000 00 00
Q ss_pred CccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC--CCCCCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP--LTFPRI 391 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~ 391 (489)
-.............+.+|||.|||||++.+.+|+..+|+||||||+||||.|.+||.+.+..+++.+|+... +.+|..
T Consensus 333 ~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~ 412 (550)
T KOG0605|consen 333 QLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE 412 (550)
T ss_pred HHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc
Confidence 000000111123456899999999999999999999999999999999999999999999999999998755 666665
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCcccccccccccccCcCc
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNNDLYCKIKKKVYVPKLS 471 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 471 (489)
...+ .++.|||.+||. ||++|++ ..+++||++||||++++|+.|+...||++|... .+....+++++.
T Consensus 413 ~~~s-------~eA~DLI~rll~-d~~~RLG-~~G~~EIK~HPfF~~v~W~~l~~~~apfvP~v~---~~~DT~yFddF~ 480 (550)
T KOG0605|consen 413 VDLS-------DEAKDLITRLLC-DPENRLG-SKGAEEIKKHPFFKGVDWDHLREMPAPFVPQVN---SELDTQYFDDFP 480 (550)
T ss_pred Cccc-------HHHHHHHHHHhc-CHHHhcC-cccHHHHhcCCccccCCcchhhcCCCCCCCCCC---CcccccccccCc
Confidence 4444 258999999999 9999999 468889999999999999999999999998863 233344444444
Q ss_pred c
Q 011302 472 K 472 (489)
Q Consensus 472 ~ 472 (489)
.
T Consensus 481 e 481 (550)
T KOG0605|consen 481 E 481 (550)
T ss_pred c
Confidence 3
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4e-67 Score=495.63 Aligned_cols=283 Identities=42% Similarity=0.780 Sum_probs=255.5
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|+++++||+|+||+||.++.++ +++.||+|++++......+.......|..+|..++||+||+|+..|++
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~d-----t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt 96 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKD-----TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT 96 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcc-----cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc
Confidence 456899999999999999999999997 789999999999998888888899999999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
.+.+|||+||+.||+|+..|++. +.|++..++.|+.+|+.||.|||++|||||||||||||||.+|+++|+|||+++.
T Consensus 97 ~~kLylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~ 174 (357)
T KOG0598|consen 97 EEKLYLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKE 174 (357)
T ss_pred CCeEEEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchh
Confidence 99999999999999999999886 7899999999999999999999999999999999999999999999999999842
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
.-
T Consensus 175 ~~------------------------------------------------------------------------------ 176 (357)
T KOG0598|consen 175 DL------------------------------------------------------------------------------ 176 (357)
T ss_pred cc------------------------------------------------------------------------------
Confidence 11
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
.....+.++|||+.|||||++.+.+|+.++|+|||||++|||++|.+||.+.+....+.+|..+....+..-..
T Consensus 177 ~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls------ 250 (357)
T KOG0598|consen 177 KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLS------ 250 (357)
T ss_pred cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCC------
Confidence 01224566899999999999999999999999999999999999999999999999999999988443332111
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc--ccCCCCCCCCcc
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI--RSIKPPEVPNND 456 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~~ 456 (489)
.++++||+++|.+||++|+++...+++|.+||||+++||+.+ +.+.||+.|...
T Consensus 251 --~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~ 306 (357)
T KOG0598|consen 251 --EEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVT 306 (357)
T ss_pred --HHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCC
Confidence 248999999999999999997778889999999999999976 778899888753
No 4
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-66 Score=474.05 Aligned_cols=277 Identities=43% Similarity=0.801 Sum_probs=259.6
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
..+++|+.++.||.|+||+|.+++.+. ++.+||+|++++..+....+.+...+|..+|+.+.||++++|++.|.+
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~-----~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d 115 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKH-----SGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD 115 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEcc-----CCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc
Confidence 678999999999999999999999997 578999999999999988899999999999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
.+++||||||++||.|+.++++. ++|++..+++|+.||+.||+|||+++||+|||||||||||.+|++||+|||+|+.
T Consensus 116 ~~~lymvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~ 193 (355)
T KOG0616|consen 116 NSNLYMVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKR 193 (355)
T ss_pred CCeEEEEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEE
Confidence 99999999999999999999886 7899999999999999999999999999999999999999999999999999965
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+.
T Consensus 194 v~------------------------------------------------------------------------------ 195 (355)
T KOG0616|consen 194 VS------------------------------------------------------------------------------ 195 (355)
T ss_pred ec------------------------------------------------------------------------------
Confidence 42
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
.++.++||||.|+|||++...+|+.++|+|||||++|||+.|.+||.+.+..+++.+|+.+.+.+|....+
T Consensus 196 ---~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~------ 266 (355)
T KOG0616|consen 196 ---GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSS------ 266 (355)
T ss_pred ---CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCH------
Confidence 24667899999999999999999999999999999999999999999999999999999999999976554
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCC-ChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~-~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
+++|||.++|+.|-.+|.+... +..+|+.||||++++|..+ +.+.||++|.
T Consensus 267 ---~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp 320 (355)
T KOG0616|consen 267 ---DAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPP 320 (355)
T ss_pred ---HHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCCc
Confidence 4899999999999999988665 7889999999999999987 7788998883
No 5
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-64 Score=494.30 Aligned_cols=288 Identities=37% Similarity=0.615 Sum_probs=258.6
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCccccccee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEF 158 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~ 158 (489)
.....||.+++.||+|+|++|++|+.+. +++.||||++.++.+...++...+.+|..+|.+| +||+|++|+..|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~-----t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKA-----TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecC-----CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe
Confidence 4567899999999999999999999998 6889999999999999888999999999999999 799999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
+|...+|+|+||+++|+|.+++++. +.|++..++.|+.||+.||+|||++||||||||||||||+.||++||+|||.|
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeecccc
Confidence 9999999999999999999999987 78999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+.+........ ....
T Consensus 222 K~l~~~~~~~~-----------------------------------------------------------------~~~~ 236 (604)
T KOG0592|consen 222 KILSPSQKSQE-----------------------------------------------------------------NPVD 236 (604)
T ss_pred ccCChhhcccc-----------------------------------------------------------------CccC
Confidence 76653221100 0000
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
......+..+++||..|.+||+|.....++.+|||+||||||+|+.|.+||.+.++..++.+|+...+.||.....
T Consensus 237 ~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp~---- 312 (604)
T KOG0592|consen 237 PNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFPE---- 312 (604)
T ss_pred cccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCCH----
Confidence 0011223578999999999999999999999999999999999999999999999999999999999999875442
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEV 452 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~ 452 (489)
.+.|||.++|..||.+|+|+. +|++||||+++||+.+.++.||.+
T Consensus 313 -----~a~dLv~KLLv~dp~~Rlt~~----qIk~HpFF~~Vdw~nlw~~~PP~l 357 (604)
T KOG0592|consen 313 -----DARDLIKKLLVRDPSDRLTSQ----QIKAHPFFEGVDWENLWQQTPPKL 357 (604)
T ss_pred -----HHHHHHHHHHccCccccccHH----HHhhCcccccCChhhhhhcCCCcc
Confidence 489999999999999999997 999999999999999999999865
No 6
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-62 Score=494.98 Aligned_cols=284 Identities=40% Similarity=0.753 Sum_probs=257.2
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~ 157 (489)
..+.+++|.++++||+|+||+|++|..+. ++++||||+++++.+-.++.++..+.|.+|+.... ||+++.|+.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~-----~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~ 437 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKG-----TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC 437 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcC-----CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc
Confidence 56888999999999999999999999998 67899999999999888888999999999998886 9999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCC
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~ 237 (489)
|++.+++|+||||+.||++..+.+ ...|++..++.|+++|+.||.|||++||||||||.+|||||.+|++||+|||+
T Consensus 438 fQT~~~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGl 514 (694)
T KOG0694|consen 438 FQTKEHLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGL 514 (694)
T ss_pred cccCCeEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEeccccc
Confidence 999999999999999999644333 26799999999999999999999999999999999999999999999999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
++..
T Consensus 515 cKe~---------------------------------------------------------------------------- 518 (694)
T KOG0694|consen 515 CKEG---------------------------------------------------------------------------- 518 (694)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 8421
Q ss_pred cccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCch
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
.....++.++||||.|||||++.+..|+.++|+|||||+|||||+|+.||.|+++.+++..|+...+.+|.....
T Consensus 519 --m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~--- 593 (694)
T KOG0694|consen 519 --MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSK--- 593 (694)
T ss_pred --CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccH---
Confidence 111346788999999999999999999999999999999999999999999999999999999999988876433
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCCccc
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPNNDL 457 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~~~ 457 (489)
++.++|++||.+||++|+++. ...++|++||||++|||+.| +.++||++|....
T Consensus 594 ------ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~ 650 (694)
T KOG0694|consen 594 ------EAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKG 650 (694)
T ss_pred ------HHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCC
Confidence 588999999999999999984 35679999999999999987 7799999988643
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-61 Score=460.01 Aligned_cols=279 Identities=30% Similarity=0.454 Sum_probs=236.8
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH----HHHHHHHHHHHHHHHhCCCCCcccccce
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI----RKKLHRADMEKVILTMLDHPFLPTLYAE 157 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 157 (489)
..+.|.+.+.||+|+||.|-+|..+. +++.||||++.+..... ......+.+|+++|++|+|||||+++++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~-----tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~ 244 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKK-----TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF 244 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcc-----cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee
Confidence 34789999999999999999999998 68999999999876553 2244457789999999999999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC---CcEEEcc
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED---GHIMLSD 234 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~---~~vkl~D 234 (489)
|+..+..||||||++||+|++.+-.+ +.+.+...+.+++||+.||.|||++||+||||||+|||+..+ ..+||+|
T Consensus 245 f~~~ds~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 245 FEVPDSSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred eecCCceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecc
Confidence 99999999999999999999999887 679999999999999999999999999999999999999866 7899999
Q ss_pred cCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCC
Q 011302 235 FDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDD 314 (489)
Q Consensus 235 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (489)
||+|+...
T Consensus 323 FGlAK~~g------------------------------------------------------------------------ 330 (475)
T KOG0615|consen 323 FGLAKVSG------------------------------------------------------------------------ 330 (475)
T ss_pred cchhhccc------------------------------------------------------------------------
Confidence 99995321
Q ss_pred ccccccccccCCccccCCCCccCcchhcCCCC---CCcccHHHHHHHHHHHhhCCCCCCCCCcHH-HHHHHhcCCCCCCC
Q 011302 315 PEVVAEPINARSKSFVGTHEYLAPEVISGQGH---GSAVDWWTLGVFLYEMLYGTTPFKGENNEK-TLINILKKPLTFPR 390 (489)
Q Consensus 315 ~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~---~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~~~p~ 390 (489)
......++||||.|.|||++.+..+ ..++|||||||+||-+|+|.+||.+..... ...+|.++.+.+-.
T Consensus 331 -------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p 403 (475)
T KOG0615|consen 331 -------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGP 403 (475)
T ss_pred -------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccC
Confidence 1234578899999999999987663 458899999999999999999998876655 77888888776542
Q ss_pred CCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcc----ccccCCCCCCCCc
Q 011302 391 IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA----LIRSIKPPEVPNN 455 (489)
Q Consensus 391 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~----~~~~~~~p~~~~~ 455 (489)
. .+.....++++||.+||..||++|+++. ++|+||||+..+.. .+.++.|+...++
T Consensus 404 ~-----~w~~Iseea~dlI~~mL~VdP~~R~s~~----eaL~hpW~~~~~~~s~~~~l~~~~~l~~~e~ 463 (475)
T KOG0615|consen 404 L-----QWDRISEEALDLINWMLVVDPENRPSAD----EALNHPWFKDAPCLSKQDILKKLQPLSIEEN 463 (475)
T ss_pred h-----hhhhhhHHHHHHHHHhhEeCcccCcCHH----HHhcChhhhcccccchHHHHhhcCccccccc
Confidence 2 2334556799999999999999999998 99999999977632 3455666655544
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-59 Score=468.28 Aligned_cols=259 Identities=31% Similarity=0.520 Sum_probs=239.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
.+|...+.||+|||+.||.+++.. ++..||+|++.+..+......+.+.+|++|.+.|+|||||+++++|++.++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~-----tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLD-----TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcC-----CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCc
Confidence 469999999999999999999976 688999999999988888888889999999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|||+|+|..++|..+++++ +.++|.+++.|++||+.||.|||+++|||||||..|++|+++.+|||+|||+|..+..
T Consensus 93 VYivLELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred eEEEEEecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecC
Confidence 99999999999999999865 7899999999999999999999999999999999999999999999999999965432
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
..
T Consensus 171 ------------------------------------------------------------------------------~~ 172 (592)
T KOG0575|consen 171 ------------------------------------------------------------------------------DG 172 (592)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 12
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.+..++||||.|+|||++...+++..+||||+|||+|.||+|++||...+-.+++.+|....+.+|.....
T Consensus 173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~--------- 243 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSA--------- 243 (592)
T ss_pred cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCH---------
Confidence 35678899999999999999999999999999999999999999999999999999999999999873322
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCc-CCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF-KGIN 440 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f-~~~~ 440 (489)
+++|||.+||..||.+||++. +||.|+|| ++.-
T Consensus 244 ~A~dLI~~lL~~~P~~Rpsl~----~vL~h~Ff~~g~~ 277 (592)
T KOG0575|consen 244 EAKDLIRKLLRPNPSERPSLD----EVLDHPFFKSGFT 277 (592)
T ss_pred HHHHHHHHHhcCCcccCCCHH----HHhcCHhhhCCCc
Confidence 589999999999999999998 99999999 4443
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-56 Score=427.62 Aligned_cols=259 Identities=31% Similarity=0.516 Sum_probs=226.2
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|.+.+.||.|+||+||+|+++. ++..||||.+.+..+. .+..+.+..|+.+|+.++|||||.|++++++++
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~-----~~~~VAIK~i~~~~l~-~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~ 82 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKK-----SGTEVAIKCIAKKKLN-KKLVELLLSEIKILKELKHPNIVRLLDCIEDDD 82 (429)
T ss_pred cccceehhhccCcceEEEEEeEecc-----CCceEEeeeehhhccC-HHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC
Confidence 4789999999999999999999998 5688999999887653 455667888999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC------CcEEEcccC
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED------GHIMLSDFD 236 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~------~~vkl~DFG 236 (489)
++|||||||.||||.++++++ +++++..++.++.||+.||++||+++||||||||+||||+.+ -.+||+|||
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 999999999999999999987 689999999999999999999999999999999999999864 358999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+|+.+..
T Consensus 161 fAR~L~~------------------------------------------------------------------------- 167 (429)
T KOG0595|consen 161 FARFLQP------------------------------------------------------------------------- 167 (429)
T ss_pred hhhhCCc-------------------------------------------------------------------------
Confidence 9976542
Q ss_pred ccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCc
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSS 396 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~ 396 (489)
.....++||+|.|||||++..+.|+.|+|+||+|+|||+|++|++||+..+..+.+..+..+....|.......
T Consensus 168 ------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s 241 (429)
T KOG0595|consen 168 ------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELS 241 (429)
T ss_pred ------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhcc
Confidence 11235679999999999999999999999999999999999999999999999999988876655554433322
Q ss_pred hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 397 KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 397 ~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
. .+.+|+..+|.+++..|.+.. +-+.|+++..
T Consensus 242 ~------~~~~Ll~~ll~~~~~~~~~~~----~~~~~~~l~~ 273 (429)
T KOG0595|consen 242 N------PLRELLISLLQRNPKDRISFE----DFFDHPFLAA 273 (429)
T ss_pred C------chhhhhhHHHhcCccccCchH----Hhhhhhhccc
Confidence 2 266999999999999999886 6777777754
No 10
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4e-56 Score=420.94 Aligned_cols=259 Identities=30% Similarity=0.449 Sum_probs=224.7
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++.+.++.||+|..|+||+|+++. +++.||+|++.... .....+++.+|+++++..+||+||++|++|.+
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk~-----t~~i~AlK~I~~~~--~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHKP-----TGKIYALKVILLNI--DPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEcC-----CCeEEEEEeecccC--CHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 455678888999999999999999997 68999999994332 23455678889999999999999999999999
Q ss_pred Cc-eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 161 SH-YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 161 ~~-~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
+. .++|+||||+||+|.+++... +++++.....|+.++++||.|||+ ++||||||||+||||+..|.|||||||.+
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEecccccc
Confidence 88 599999999999999998876 779999999999999999999995 89999999999999999999999999998
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+.+.
T Consensus 227 ~~lv---------------------------------------------------------------------------- 230 (364)
T KOG0581|consen 227 GILV---------------------------------------------------------------------------- 230 (364)
T ss_pred HHhh----------------------------------------------------------------------------
Confidence 4332
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCC-----CcHHHHHHHhcCC-CCCCCCC
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE-----NNEKTLINILKKP-LTFPRIG 392 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~-~~~p~~~ 392 (489)
+....+++||..|||||.+.+..|+.++||||||+.++||++|+.||... +..+.+..|+.++ ...|..
T Consensus 231 ----nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~- 305 (364)
T KOG0581|consen 231 ----NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG- 305 (364)
T ss_pred ----hhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc-
Confidence 22456789999999999999999999999999999999999999999874 5567888888753 344433
Q ss_pred CCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 393 VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 393 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
..+ .++++||..||++||.+|+++. ++++|||++...
T Consensus 306 -~fS------~ef~~FV~~CL~Kdp~~R~s~~----qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 306 -EFS------PEFRSFVSCCLRKDPSERPSAK----QLLQHPFIKKFE 342 (364)
T ss_pred -cCC------HHHHHHHHHHhcCCcccCCCHH----HHhcCHHHhhcc
Confidence 122 2589999999999999999998 999999998654
No 11
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-57 Score=415.56 Aligned_cols=285 Identities=39% Similarity=0.724 Sum_probs=258.1
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
..+..++|..+++||+|.||+|-+|+.+. ++++||||+++++.+..+..+..-..|-++|+..+||++..|...|
T Consensus 163 ~kvTm~dFdfLKvLGkGTFGKVIL~rEKa-----t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF 237 (516)
T KOG0690|consen 163 NKVTMEDFDFLKVLGKGTFGKVILCREKA-----TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF 237 (516)
T ss_pred ceeccchhhHHHHhcCCccceEEEEeecc-----cCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh
Confidence 34678999999999999999999999887 6899999999999888788888888899999999999999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
+..+++|+||||+.||+|+-.+.+. +.|++..+++|..+|+.||.|||+++||+||||.+|+|+|.+|++||+|||++
T Consensus 238 Qt~drlCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLC 315 (516)
T KOG0690|consen 238 QTQDRLCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLC 315 (516)
T ss_pred ccCceEEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccc
Confidence 9999999999999999999888775 67999999999999999999999999999999999999999999999999997
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+.-
T Consensus 316 KE~----------------------------------------------------------------------------- 318 (516)
T KOG0690|consen 316 KEE----------------------------------------------------------------------------- 318 (516)
T ss_pred hhc-----------------------------------------------------------------------------
Confidence 321
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
........++||||.|+|||++....|+.++|+|.+||++|||++|+.||...+....+.-|+.+.+.||....+
T Consensus 319 -I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~---- 393 (516)
T KOG0690|consen 319 -IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSP---- 393 (516)
T ss_pred -ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCH----
Confidence 001234578999999999999999999999999999999999999999999999999999999999999976544
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCCccc
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPNNDL 457 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~~~ 457 (489)
+++.|+..+|.+||.+|++.- +.+.+|.+|+||.+++|... +.+.||+-|....
T Consensus 394 -----eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtS 450 (516)
T KOG0690|consen 394 -----EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTS 450 (516)
T ss_pred -----HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCccc
Confidence 589999999999999999976 45789999999999999865 7899999887544
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.8e-56 Score=406.60 Aligned_cols=266 Identities=27% Similarity=0.414 Sum_probs=218.8
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
+.|+.+.++|+|+||.||+|++++ +++.||||.+..... ......-.++|+.+|+.|.|+|+|.|+++|.....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~-----TgqIVAIKkF~Esed-d~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrk 75 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKD-----TGQIVAIKKFVESED-DPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRK 75 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCC-----cccEEEEEeeccCCc-cHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcce
Confidence 568889999999999999999998 789999999964322 12334457789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
++||+|||+..-| +.+.+.+ ..++...++.|++|++.|+.|+|+++|||||||||||||+.+|.+||||||+|+.+..
T Consensus 76 lhLVFE~~dhTvL-~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 76 LHLVFEYCDHTVL-HELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred eEEEeeecchHHH-HHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 9999999965444 5556654 4588999999999999999999999999999999999999999999999999954431
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.+
T Consensus 154 ------------------------------------------------------------------------------pg 155 (396)
T KOG0593|consen 154 ------------------------------------------------------------------------------PG 155 (396)
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 01
Q ss_pred cCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC------------------
Q 011302 324 ARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK------------------ 384 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~------------------ 384 (489)
...+.++.|.+|+|||.+.| ..|+..+||||+||++.||++|++.|+|.++.+++..|...
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 12355789999999999998 67999999999999999999999999999988887776531
Q ss_pred -CCCCCCCCCCCchh--H-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 385 -PLTFPRIGVSSSKE--F-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 385 -~~~~p~~~~~~~~~--~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
.+.+|........+ + .....+.||+.+||..||++|++.+ +++.|+||.++
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~----qll~H~yFd~~ 290 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCE----QLLHHPYFDGF 290 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHH----HHhcChHHHHH
Confidence 12334333222221 1 2233578999999999999999987 99999999654
No 13
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-55 Score=437.98 Aligned_cols=263 Identities=29% Similarity=0.485 Sum_probs=235.4
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.+-|++++.||.|+.|.|-+|++.. +++.+|||++.+...-.......+.+|+.+|+.+.||||++||++|++..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~-----TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAE-----TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhccc-----ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc
Confidence 3568899999999999999999987 78999999998774333445567888999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
++|||+||++||.|++++-+. ++|++.++..+++||+.||.|||..+||||||||+|+||+.++++||+|||+|....
T Consensus 86 ~lylvlEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~ 163 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV 163 (786)
T ss_pred eEEEEEEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc
Confidence 999999999999999999887 789999999999999999999999999999999999999999999999999983211
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
.
T Consensus 164 -------------------------------------------------------------------------------~ 164 (786)
T KOG0588|consen 164 -------------------------------------------------------------------------------P 164 (786)
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred ccCCccccCCCCccCcchhcCCCC-CCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
+....+.||+|.|.|||++.|.+| +.++||||.|||||.||+|+.||++++-..++.++.++.+..|.....
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~------- 237 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISS------- 237 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCH-------
Confidence 223456799999999999999998 889999999999999999999999999999999999999999864433
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~ 444 (489)
++++||++||..||++|++.. +|++|||+.+..-...
T Consensus 238 --eaQdLLr~ml~VDp~~RiT~~----eI~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 238 --EAQDLLRRMLDVDPSTRITTE----EILKHPFLSGYTSLPS 274 (786)
T ss_pred --HHHHHHHHHhccCccccccHH----HHhhCchhhcCCCCCh
Confidence 599999999999999999998 9999999988765443
No 14
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-55 Score=419.44 Aligned_cols=289 Identities=36% Similarity=0.623 Sum_probs=251.7
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
..+..+.|+.-++||+|+||+||-|+.+. +++.||+|.+.+..+..+..-....+|..+|.+++.++||.|-.+|
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvra-----TGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf 254 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRA-----TGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF 254 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEec-----chhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee
Confidence 44677899999999999999999999988 6899999999999888887777889999999999999999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
++.+.+||||..|+||||.-.+.......|++..+++|+.+|+.||++||..+||+|||||+|||+|+.|+++|+|+|+|
T Consensus 255 eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLA 334 (591)
T KOG0986|consen 255 ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLA 334 (591)
T ss_pred cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceE
Confidence 99999999999999999987777766668999999999999999999999999999999999999999999999999998
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
..+..
T Consensus 335 vei~~--------------------------------------------------------------------------- 339 (591)
T KOG0986|consen 335 VEIPE--------------------------------------------------------------------------- 339 (591)
T ss_pred EecCC---------------------------------------------------------------------------
Confidence 43321
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH----HHHHHHhcCCCCCCCCCCC
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE----KTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~~i~~~~~~~p~~~~~ 394 (489)
.....+.+||.+|||||++.+..|+...|+|||||+||||+.|+.||...... ++-+.++..+..+++...
T Consensus 340 ----g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS- 414 (591)
T KOG0986|consen 340 ----GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFS- 414 (591)
T ss_pred ----CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccC-
Confidence 11223448999999999999999999999999999999999999999765433 444555566666653221
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCCcc-cccc
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPNND-LYCK 460 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~~-~~~~ 460 (489)
.++++|.+.+|++||++|++.. ++.+++++||||+++||..+ ..+.||++|+.. +|++
T Consensus 415 --------~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~aVyak 476 (591)
T KOG0986|consen 415 --------EEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGAVYAK 476 (591)
T ss_pred --------HHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCccccchh
Confidence 2589999999999999999987 67889999999999999976 678999998854 6665
No 15
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-54 Score=420.07 Aligned_cols=264 Identities=27% Similarity=0.431 Sum_probs=222.0
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecC
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEAS 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~ 161 (489)
.++|.++++||.|+||.||+|+.+. ++..||||.+++....-.+. .-.+|+..|++|+ |||||+|++++.+.
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~-----~~~~VAIK~MK~Kf~s~ee~--~nLREvksL~kln~hpniikL~Evi~d~ 81 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKE-----TGELVAIKKMKKKFYSWEEC--MNLREVKSLRKLNPHPNIIKLKEVIRDN 81 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecC-----CCceeeHHHHHhhhccHHHH--HHHHHHHHHHhcCCCCcchhhHHHhhcc
Confidence 4789999999999999999999887 67889999998765543222 1346999999999 99999999999988
Q ss_pred c-eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 162 H-YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 162 ~-~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
+ ++|+||||| ..+|+++++.+ ++.|++..++.|+.||++||+|+|.+|+.|||||||||||..+..+||+|||+|+.
T Consensus 82 ~~~L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 82 DRILYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred CceEeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccc
Confidence 8 999999999 79999999887 68999999999999999999999999999999999999999999999999999965
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+...
T Consensus 160 v~Sk---------------------------------------------------------------------------- 163 (538)
T KOG0661|consen 160 VRSK---------------------------------------------------------------------------- 163 (538)
T ss_pred cccC----------------------------------------------------------------------------
Confidence 5321
Q ss_pred ccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc--C-------------
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK--K------------- 384 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~--~------------- 384 (489)
...+.++-|.+|+|||+|.... |+.++||||+|||++|+++-++.|.|.++.+++.+|+. +
T Consensus 164 ---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 164 ---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred ---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence 1235578999999999998765 79999999999999999999999999999999888864 1
Q ss_pred ----CCCCCCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 385 ----PLTFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 385 ----~~~~p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
.+.+|......... .....++.+||.+||.|||++|||+. ++|+||||+.
T Consensus 241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~----~al~~pffq~ 296 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTAS----QALQHPFFQV 296 (538)
T ss_pred HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHH----HHhcCccccc
Confidence 11222211111110 02334688999999999999999998 9999999974
No 16
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-55 Score=456.98 Aligned_cols=284 Identities=38% Similarity=0.672 Sum_probs=249.7
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
.++..++|.++++||+|+||.|.+++.++ +++.||+|++++..+..+....-|..|..+|...+.+.|+.|+.+|
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~-----t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF 144 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKS-----TEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF 144 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeec-----cccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh
Confidence 45677999999999999999999999998 6889999999998887777777888999999999999999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
+++.++||||||++||||..++.+. .++++..+++|+.+|+.||+-||+.|+|||||||+|||||..||+||+|||.+
T Consensus 145 QD~~~LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 145 QDERYLYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred cCccceEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhH
Confidence 9999999999999999999999887 38999999999999999999999999999999999999999999999999986
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
-++..-
T Consensus 223 lkm~~d-------------------------------------------------------------------------- 228 (1317)
T KOG0612|consen 223 LKMDAD-------------------------------------------------------------------------- 228 (1317)
T ss_pred HhcCCC--------------------------------------------------------------------------
Confidence 332210
Q ss_pred ccccccCCccccCCCCccCcchhcC-----CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC--CCCCCCC
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK--PLTFPRI 391 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~ 391 (489)
+.-+....+|||.|++||+|.. ..|+..+|+||+||++|||++|.+||+..+-.+++-+|+.- .+.||..
T Consensus 229 ---G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~ 305 (1317)
T KOG0612|consen 229 ---GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDE 305 (1317)
T ss_pred ---CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcc
Confidence 0112345589999999999952 34899999999999999999999999999999999999864 6777743
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
.. .+.++++||+++|. +|+.|++- .++++++.||||.+++|+.|+...||++|..
T Consensus 306 ~~-------VSeeakdLI~~ll~-~~e~RLgr-ngiedik~HpFF~g~~W~~iR~~~pP~vPev 360 (1317)
T KOG0612|consen 306 TD-------VSEEAKDLIEALLC-DREVRLGR-NGIEDIKNHPFFEGIDWDNIRESVPPVVPEV 360 (1317)
T ss_pred cc-------cCHHHHHHHHHHhc-Chhhhccc-ccHHHHHhCccccCCChhhhhhcCCCCCCcC
Confidence 32 22369999999875 78899985 3667999999999999999999999999885
No 17
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-53 Score=427.03 Aligned_cols=261 Identities=38% Similarity=0.585 Sum_probs=230.3
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH--HHHHHHHHHHHHHHHhCC-CCCcccccce
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI--RKKLHRADMEKVILTMLD-HPFLPTLYAE 157 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~-hpnIv~l~~~ 157 (489)
...+.|.+.+.||+|+||+|++|++.. ++..||+|+++++.... ......+.+|+.+++.+. ||||++++++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~-----t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev 88 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRL-----TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEV 88 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeecc-----CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEE
Confidence 445799999999999999999999887 56899999887753221 123445667999999999 9999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC-CcEEEcccC
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED-GHIMLSDFD 236 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~-~~vkl~DFG 236 (489)
+.....+|+|||||.||+|++++... +++.+.+++.+++||+.||+|||++||+||||||||||++.+ +++||+|||
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 99999999999999999999999884 789999999999999999999999999999999999999999 999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
++....
T Consensus 167 ~s~~~~-------------------------------------------------------------------------- 172 (370)
T KOG0583|consen 167 LSAISP-------------------------------------------------------------------------- 172 (370)
T ss_pred cccccC--------------------------------------------------------------------------
Confidence 984321
Q ss_pred ccccccccCCccccCCCCccCcchhcCCC-C-CCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCC
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQG-H-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 394 (489)
.......+.|||+.|+|||++.+.. | +.++||||+||+||.|++|+.||...+...++..|..+.+.+|....
T Consensus 173 ----~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~- 247 (370)
T KOG0583|consen 173 ----GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL- 247 (370)
T ss_pred ----CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC-
Confidence 0022456779999999999999988 8 68999999999999999999999999999999999999999997653
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
+ .++++||++||..||.+|+++. +++.||||+.
T Consensus 248 -S------~~~~~Li~~mL~~~P~~R~t~~----~i~~h~w~~~ 280 (370)
T KOG0583|consen 248 -S------PEARSLIEKMLVPDPSTRITLL----EILEHPWFQK 280 (370)
T ss_pred -C------HHHHHHHHHHcCCCcccCCCHH----HHhhChhhcc
Confidence 1 1489999999999999999997 9999999996
No 18
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-54 Score=384.54 Aligned_cols=262 Identities=36% Similarity=0.605 Sum_probs=240.0
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
....+++|.+.+.||+|-||.||+|+.+. +.-.||+|++.++.+...+..+++.+|++|.+.|+||||+++|++|
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarekk-----s~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f 91 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREKK-----SLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF 91 (281)
T ss_pred cccchhhccccccccCCccccEeEeeecc-----CCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe
Confidence 34667999999999999999999999987 5788999999999888777888899999999999999999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
.+....||++||..+|+|+..++..+..++++..+..|+.|++.||.|+|.++||||||||+|+|++.+|.+||+|||.+
T Consensus 92 hd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 92 HDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred eccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCce
Confidence 99999999999999999999999777788999999999999999999999999999999999999999999999999986
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
-.
T Consensus 172 V~------------------------------------------------------------------------------ 173 (281)
T KOG0580|consen 172 VH------------------------------------------------------------------------------ 173 (281)
T ss_pred ee------------------------------------------------------------------------------
Confidence 11
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
.+ ..+..++|||..|.+||++.+..++..+|+|++|++.||++.|.+||...+..+++.+|.+-.+.+|.....
T Consensus 174 -~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~---- 247 (281)
T KOG0580|consen 174 -AP-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISG---- 247 (281)
T ss_pred -cC-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccCh----
Confidence 11 345678899999999999999999999999999999999999999999999999999999988888854333
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
.++|||.+||.++|.+|.... +++.|||...
T Consensus 248 -----~a~dlI~~ll~~~p~~r~~l~----~v~~hpwI~a 278 (281)
T KOG0580|consen 248 -----GAADLISRLLVKNPIERLALT----EVMDHPWIVA 278 (281)
T ss_pred -----hHHHHHHHHhccCccccccHH----HHhhhHHHHh
Confidence 489999999999999999876 9999999754
No 19
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7.4e-53 Score=421.63 Aligned_cols=281 Identities=36% Similarity=0.701 Sum_probs=240.4
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
..+..++|.+.+.||+|+||.||+|.++.. ....||+|++.+...........+.+|+.+++.++||||+++++++
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~ 100 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNE----DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF 100 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECC----CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence 345678999999999999999999987752 2468999999877655555667788899999999999999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
.+++.+|+||||++||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++
T Consensus 101 ~~~~~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a 178 (340)
T PTZ00426 101 KDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFA 178 (340)
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCC
Confidence 9999999999999999999998875 57999999999999999999999999999999999999999999999999997
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+....
T Consensus 179 ~~~~~--------------------------------------------------------------------------- 183 (340)
T PTZ00426 179 KVVDT--------------------------------------------------------------------------- 183 (340)
T ss_pred eecCC---------------------------------------------------------------------------
Confidence 32210
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.......+..+...+|....
T Consensus 184 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~----- 252 (340)
T PTZ00426 184 ------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLD----- 252 (340)
T ss_pred ------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCC-----
Confidence 112347999999999999998999999999999999999999999998888888888887766654321
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCCc
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPNN 455 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~ 455 (489)
..+.+||++||+.||++|++.. ..++++++||||++++|..+ +.+.+|..|..
T Consensus 253 ----~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~ 308 (340)
T PTZ00426 253 ----NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKY 308 (340)
T ss_pred ----HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCC
Confidence 2488999999999999998632 45679999999999999876 45566766663
No 20
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-53 Score=412.50 Aligned_cols=270 Identities=33% Similarity=0.572 Sum_probs=225.2
Q ss_pred hcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHH-----------HHHHHHHHHHHHHh
Q 011302 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-----------KLHRADMEKVILTM 145 (489)
Q Consensus 77 ~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~-----------~~~~~~~E~~~l~~ 145 (489)
.+.+..+++|++++.||+|.||.|-+|++.. .++.||||++.+....... -.+++.+|+.+|++
T Consensus 90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~-----~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKk 164 (576)
T KOG0585|consen 90 DQDRKQLNQYELIKEIGSGQYGKVKLARDEV-----DGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKK 164 (576)
T ss_pred cccceehhheehhhhhcCCccceEEEEeecC-----CCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHh
Confidence 4456678999999999999999999999886 6899999999876554221 23577889999999
Q ss_pred CCCCCcccccceeecC--ceEEEEEeecCCCchHHHHHhCCCCC-CChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCe
Q 011302 146 LDHPFLPTLYAEFEAS--HYSCLVMEYCPGGDLYAARQRQPGKR-FGISSAKFYAAETLLALEYLHMMGIVYRDLKPENV 222 (489)
Q Consensus 146 l~hpnIv~l~~~~~~~--~~~~lV~E~~~gg~L~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NI 222 (489)
|+|||||+|+++..+. +.+|||+|||..|.+...- ..+. |++.+++.|+++++.||+|||.+|||||||||.|+
T Consensus 165 l~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNL 241 (576)
T KOG0585|consen 165 LHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNL 241 (576)
T ss_pred cCCcCeeEEEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhhe
Confidence 9999999999999754 5899999999999985532 2244 99999999999999999999999999999999999
Q ss_pred EeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCcccccccccccccccccccccccccccc
Q 011302 223 LVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQV 302 (489)
Q Consensus 223 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (489)
||+.+|+|||+|||.+-.+...
T Consensus 242 Ll~~~g~VKIsDFGVs~~~~~~---------------------------------------------------------- 263 (576)
T KOG0585|consen 242 LLSSDGTVKISDFGVSNEFPQG---------------------------------------------------------- 263 (576)
T ss_pred EEcCCCcEEeeccceeeecccC----------------------------------------------------------
Confidence 9999999999999987221100
Q ss_pred CCCCCCccccCCccccccccccCCccccCCCCccCcchhcCC---C-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHH
Q 011302 303 DGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ---G-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 378 (489)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~---~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~ 378 (489)
..++ ........+|||.|+|||.+.+. . .+.+.||||+||+||.|+.|+.||.+....+++
T Consensus 264 --~~~~-------------~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~ 328 (576)
T KOG0585|consen 264 --SDEG-------------SDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF 328 (576)
T ss_pred --Cccc-------------cHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHH
Confidence 0000 00111225899999999999873 2 378999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 379 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 379 ~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
.+|...++.+|...... ..++|||.+||.+||+.|++.. +|+.|||-..
T Consensus 329 ~KIvn~pL~fP~~pe~~-------e~~kDli~~lL~KdP~~Ri~l~----~ik~Hpwvt~ 377 (576)
T KOG0585|consen 329 DKIVNDPLEFPENPEIN-------EDLKDLIKRLLEKDPEQRITLP----DIKLHPWVTR 377 (576)
T ss_pred HHHhcCcccCCCccccc-------HHHHHHHHHHhhcChhheeehh----hheecceecc
Confidence 99999999999765322 3589999999999999999997 9999999743
No 21
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.7e-54 Score=423.16 Aligned_cols=255 Identities=30% Similarity=0.523 Sum_probs=228.7
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|.+.+.||+|+||+||+|+.+. +.+.||||.+.+.... .+.++.+.+|+++++.++|||||.++++|+...+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~-----t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~ 75 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKY-----TIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLKHPNIVEMLESFETSAH 75 (808)
T ss_pred cchhHHHHhcCCccceeeeccccc-----ceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccce
Confidence 689999999999999999999887 6789999999876433 3456678889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+++|+|||.| +|+.++... +.++++.++.++.+++.||.|||+++|+|||+||.|||++.+|++|+||||+|+.+..
T Consensus 76 ~~vVte~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 76 LWVVTEYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred EEEEehhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 9999999965 999999886 7899999999999999999999999999999999999999999999999999965432
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 153 ~------------------------------------------------------------------------------t 154 (808)
T KOG0597|consen 153 N------------------------------------------------------------------------------T 154 (808)
T ss_pred C------------------------------------------------------------------------------c
Confidence 1 1
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
...+++.|||.|||||++.+++|+..+|+||||||+|||++|++||....-.+....|...+..+|.....
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~--------- 225 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASS--------- 225 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccH---------
Confidence 12345679999999999999999999999999999999999999999999999999999998888863322
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
.+..||..+|.+||..|++.. +++.|||.++
T Consensus 226 ~f~nfl~gLL~kdP~~RltW~----~Ll~HpF~k~ 256 (808)
T KOG0597|consen 226 SFVNFLQGLLIKDPAQRLTWT----DLLGHPFWKG 256 (808)
T ss_pred HHHHHHHHHhhcChhhcccHH----HHhcChHHhh
Confidence 378999999999999999987 9999999976
No 22
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.8e-52 Score=416.02 Aligned_cols=267 Identities=38% Similarity=0.715 Sum_probs=234.1
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
...++|.+.+.||+|+||.||+|+++. +++.||+|++.+...........+.+|+.+++.++||||+++++++.+
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 89 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKG-----TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD 89 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECC-----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc
Confidence 345899999999999999999999887 578899999988765555566778889999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
++.+|+||||++||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.
T Consensus 90 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 167 (329)
T PTZ00263 90 ENRVYFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKK 167 (329)
T ss_pred CCEEEEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceE
Confidence 99999999999999999988765 5789999999999999999999999999999999999999999999999999743
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
...
T Consensus 168 ~~~----------------------------------------------------------------------------- 170 (329)
T PTZ00263 168 VPD----------------------------------------------------------------------------- 170 (329)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 210
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+..+...+|....
T Consensus 171 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~------- 239 (329)
T PTZ00263 171 ----RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFD------- 239 (329)
T ss_pred ----CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCC-------
Confidence 112347999999999999999999999999999999999999999998888888888877666654321
Q ss_pred HHhhHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~ 444 (489)
..+++||.+||+.||.+|++.. ..+++++.||||++.+|..+
T Consensus 240 --~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~ 282 (329)
T PTZ00263 240 --GRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKL 282 (329)
T ss_pred --HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHH
Confidence 2489999999999999999853 34679999999999999976
No 23
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-53 Score=420.06 Aligned_cols=323 Identities=31% Similarity=0.557 Sum_probs=253.1
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
....-|..++.||-|+||+|.+++..+ +..+||+|.+++.++..++.+..+..|..||...+.+.||+||..|++
T Consensus 626 MdKSmFvkik~iGvGAFGeV~Lv~KvD-----T~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD 700 (1034)
T KOG0608|consen 626 MDKSMFVKIKTIGVGAFGEVCLVRKVD-----TRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD 700 (1034)
T ss_pred ccccceEEEeeecccccceeEEEeecc-----hhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc
Confidence 445678899999999999999999887 578999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
.+++|+||+|++||++..+|.+. +-|.|..+++|+.++.+|++++|..|+|||||||+|||||.+|++||+||||++-
T Consensus 701 kdnLYFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG 778 (1034)
T KOG0608|consen 701 KDNLYFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 778 (1034)
T ss_pred CCceEEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccccc
Confidence 99999999999999999998876 7899999999999999999999999999999999999999999999999999977
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+.+.... ..|++.++.-. ..|.+...+ ..-... ++.+.-. ....
T Consensus 779 fRWTHds----------kYYq~gdH~Rq-DSmep~~e~----~d~~~~------lkvL~~r---------------a~~~ 822 (1034)
T KOG0608|consen 779 FRWTHDS----------KYYQEGDHHRQ-DSMEPSPEW----ADISKC------LKVLERR---------------AMRQ 822 (1034)
T ss_pred ceecccc----------ccccCCCcccc-ccCCCchhh----cccccc------chHHHHH---------------HHhh
Confidence 7664332 12222111100 001100000 000000 0000000 0000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC--CCCCCCCCCCCchh
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK--PLTFPRIGVSSSKE 398 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~ 398 (489)
-..-...+++||+.|+|||+|...+|+..+|+||.|||||||+.|++||...+..+...+++.. -+.++.-...+
T Consensus 823 h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls--- 899 (1034)
T KOG0608|consen 823 HQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLS--- 899 (1034)
T ss_pred hhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccC---
Confidence 0011246789999999999999999999999999999999999999999998887776666543 23344333332
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
.++.+||.+++ .+++.|++-. +.++|+.||||++|||..++++.+|++|..
T Consensus 900 ----~e~~~li~kLc-~sad~RLGkn-g~d~vKaHpfFkgIDfsslRkq~ApYIP~I 950 (1034)
T KOG0608|consen 900 ----KEALDLIQKLC-CSADSRLGKN-GADQVKAHPFFKGIDFSSLRKQRAPYIPRI 950 (1034)
T ss_pred ----HHHHHHHHHHh-cChhhhhccc-chhhhhcCccccccchHhhhhccCCcCccc
Confidence 25789998864 5789999963 555899999999999999999999998875
No 24
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-54 Score=391.81 Aligned_cols=252 Identities=27% Similarity=0.406 Sum_probs=215.0
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccc-eee
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYA-EFE 159 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~-~~~ 159 (489)
..+.+|+++++||.|+||+||+|.+.. +++.+|.|.+.-+.+. ....+....|+.+|+.|+|||||++++ .|.
T Consensus 16 ~~l~~y~Il~~IG~GsFg~vykv~~~~-----~g~l~a~K~i~f~~md-~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~ 89 (375)
T KOG0591|consen 16 KTLADYQILKKIGRGSFGEVYKVQCLL-----DGKLVALKKIQFGMMD-AKARQDCVKEISLLKQLNHPNIVQYYAHSFI 89 (375)
T ss_pred ccHHHHHHHHHHcCCcchheEEeeecc-----Ccchhhhhhcchhhcc-HHHHHHHHHHHHHHHhcCCchHHHHHHHhhh
Confidence 345789999999999999999999987 6889999999865554 345567788999999999999999999 565
Q ss_pred cCce-EEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHh--CC--CeeecCCCCCeEeccCCcEEE
Q 011302 160 ASHY-SCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHM--MG--IVYRDLKPENVLVREDGHIML 232 (489)
Q Consensus 160 ~~~~-~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~--~~--iiHrDIKp~NILl~~~~~vkl 232 (489)
.++. ++||||||.+|||.+++++. ..+.+++..++.++.|++.||..||+ .+ |+||||||.||+|+.+|.|||
T Consensus 90 ~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL 169 (375)
T KOG0591|consen 90 EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL 169 (375)
T ss_pred ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence 5554 99999999999999988753 35789999999999999999999999 45 999999999999999999999
Q ss_pred cccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCcccc
Q 011302 233 SDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELL 312 (489)
Q Consensus 233 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (489)
+|||+++.+...
T Consensus 170 GDfGL~r~l~s~-------------------------------------------------------------------- 181 (375)
T KOG0591|consen 170 GDFGLGRFLSSK-------------------------------------------------------------------- 181 (375)
T ss_pred ccchhHhHhcch--------------------------------------------------------------------
Confidence 999998654310
Q ss_pred CCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC-CCCC
Q 011302 313 DDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT-FPRI 391 (489)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~ 391 (489)
.....+++|||+||+||.+.+.+|+.++||||+||++|||+.-++||.|.+-.+...+|..+.+. .|..
T Consensus 182 ----------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~ 251 (375)
T KOG0591|consen 182 ----------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDE 251 (375)
T ss_pred ----------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHH
Confidence 11245789999999999999999999999999999999999999999999888888999888543 2211
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..+.++..||..|++.||+.||+..
T Consensus 252 --------~YS~~l~~li~~ci~vd~~~RP~t~ 276 (375)
T KOG0591|consen 252 --------HYSTDLRELINMCIAVDPEQRPDTV 276 (375)
T ss_pred --------HhhhHHHHHHHHHccCCcccCCCcc
Confidence 1223589999999999999999864
No 25
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.1e-52 Score=408.53 Aligned_cols=265 Identities=40% Similarity=0.723 Sum_probs=230.3
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||.||+|.++. +++.||+|++.............+.+|+.+++.++||||+++++++.+++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRI-----SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcC-----CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCe
Confidence 479999999999999999999886 578899999987655444455667889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||+++|+|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999999998765 5799999999999999999999999999999999999999999999999999732210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
T Consensus 154 -------------------------------------------------------------------------------- 153 (291)
T cd05612 154 -------------------------------------------------------------------------------- 153 (291)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.......+..+...+|... ..
T Consensus 154 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------~~ 223 (291)
T cd05612 154 -RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHL---------DL 223 (291)
T ss_pred -CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccC---------CH
Confidence 11234699999999999999999999999999999999999999999988888888887776665432 12
Q ss_pred hHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCccccc
Q 011302 404 KLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR 445 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~~ 445 (489)
.+++||.+||+.||.+|++.. ..++++++||||+.++|....
T Consensus 224 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~ 266 (291)
T cd05612 224 YAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVP 266 (291)
T ss_pred HHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHh
Confidence 489999999999999999743 345699999999999998653
No 26
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-54 Score=406.23 Aligned_cols=281 Identities=36% Similarity=0.665 Sum_probs=249.5
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceee
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFE 159 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~ 159 (489)
+...+|.++.+||+|+||+|.+|..++ +.++||||+++++.+......+--+.|.++|.... -|+++.|+.+|+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkg-----tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ 420 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKG-----TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ 420 (683)
T ss_pred eeecccceEEEeccCccceeeeecccC-----cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh
Confidence 456799999999999999999999887 67899999999987766666666778999998875 679999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
.-+.+|+||||+.||+|.-.+++. ++|.+..+..|+.+|+-||-|||++|||+||||.+|||++.+|++||+|||+++
T Consensus 421 TmDRLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcK 498 (683)
T KOG0696|consen 421 TMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 498 (683)
T ss_pred hhhheeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccc
Confidence 999999999999999998877775 789999999999999999999999999999999999999999999999999973
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.--
T Consensus 499 Eni----------------------------------------------------------------------------- 501 (683)
T KOG0696|consen 499 ENI----------------------------------------------------------------------------- 501 (683)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 210
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.....+.++||||.|+|||++..++|+.++|+||+||+||||+.|++||+|.++.+++..|......+|.....
T Consensus 502 -~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSk----- 575 (683)
T KOG0696|consen 502 -FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSK----- 575 (683)
T ss_pred -cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccH-----
Confidence 01224568899999999999999999999999999999999999999999999999999999998888864322
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCC-ChHHHHcCCCcCCCCcccc--ccCCCCCCCCc
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALI--RSIKPPEVPNN 455 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~-~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~ 455 (489)
++.+++..+|.+.|.+|++... +-.+|..||||+.|||+.+ +++.||+-|..
T Consensus 576 ----EAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~ 630 (683)
T KOG0696|consen 576 ----EAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKI 630 (683)
T ss_pred ----HHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCcc
Confidence 5889999999999999999753 3468999999999999988 67889987775
No 27
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-53 Score=402.05 Aligned_cols=253 Identities=29% Similarity=0.514 Sum_probs=233.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
.+|.+.+.||+|+||+|-+|..+. .++.||||.++++.+...+.+-.+.+|++||+.|+||||+.+|++|++.+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~-----sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHK-----SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhcc-----CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce
Confidence 579999999999999999999876 689999999999999888888899999999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+.|||||..+|+|++++... +.|++.+++.+++||+.|+.|||.++++|||||.+|||+|.|+++||+|||++-.+..
T Consensus 128 IvivMEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEEEEEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999999999999887 7899999999999999999999999999999999999999999999999999733321
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.
T Consensus 206 -------------------------------------------------------------------------------~ 206 (668)
T KOG0611|consen 206 -------------------------------------------------------------------------------K 206 (668)
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred cCCccccCCCCccCcchhcCCCC-CCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~ 402 (489)
....+|||+|-|.+||+++|.+| ++.+|-|||||+||.|+.|..||+|.+...++.+|..+.+..|....
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~PS--------- 277 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPETPS--------- 277 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCCCc---------
Confidence 23467899999999999999998 89999999999999999999999999999999999999887775432
Q ss_pred hhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.+.-||+.||..||++|.|+. +|..|.|.
T Consensus 278 -dA~gLIRwmLmVNP~RRATie----DiAsHWWv 306 (668)
T KOG0611|consen 278 -DASGLIRWMLMVNPERRATIE----DIASHWWV 306 (668)
T ss_pred -hHHHHHHHHHhcCcccchhHH----HHhhhhee
Confidence 378999999999999999987 99999885
No 28
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=7.4e-52 Score=404.64 Aligned_cols=277 Identities=35% Similarity=0.569 Sum_probs=227.3
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
.|++.+.||+|+||+||+|.+.. +++.||+|.+.+...........+.+|+.+++.++|+||+++++++.+++.+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRA-----TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEec-----CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeE
Confidence 37889999999999999999887 5789999999877655444445677899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+++|+|.+++.......+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~- 154 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE- 154 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC-
Confidence 9999999999998887655445789999999999999999999999999999999999999999999999999733210
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 155 ------------------------------------------------------------------------------~~ 156 (285)
T cd05631 155 ------------------------------------------------------------------------------GE 156 (285)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHH----HHhcCCCCCCCCCCCCchhHH
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI----NILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~----~i~~~~~~~p~~~~~~~~~~~ 400 (489)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+...... .+......++..
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 227 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEK--------- 227 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCcc---------
Confidence 1123468999999999999999999999999999999999999998766532222 222222222211
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCC-ChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~-~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
....+.+||++||+.||++|+++.+ .++++++||||++++|+.+ +.++||+.|+
T Consensus 228 ~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05631 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCPD 284 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCCC
Confidence 1125899999999999999998643 3679999999999999987 4467787775
No 29
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.2e-51 Score=414.00 Aligned_cols=308 Identities=31% Similarity=0.557 Sum_probs=232.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||+||+|+++. +++.||||++.+...........+..|+.++..++||||+++++++.+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKD-----TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECC-----CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCe
Confidence 479999999999999999999886 578999999988766555566778889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|||||||+||+|.+++.+. +.+++..++.++.||+.||+|||++|||||||||+|||++.+|++||+|||+++.+..
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999999998775 5799999999999999999999999999999999999999999999999999864432
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
..... .+..... .. +....+.... ... ..........
T Consensus 154 ~~~~~----------~~~~~~~-~~-----~~~~~~~~~~--~~~-------------------------~~~~~~~~~~ 190 (363)
T cd05628 154 AHRTE----------FYRNLNH-SL-----PSDFTFQNMN--SKR-------------------------KAETWKRNRR 190 (363)
T ss_pred ccccc----------ccccccc-cc-----cccccccccc--ccc-------------------------ccchhhhccc
Confidence 10000 0000000 00 0000000000 000 0000000001
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC--CCCCCCCCCCCchhHHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK--PLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~~~~ 401 (489)
....+.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+.++... ...+|.....
T Consensus 191 ~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~------- 263 (363)
T cd05628 191 QLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPI------- 263 (363)
T ss_pred cccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCC-------
Confidence 1234568999999999999999999999999999999999999999998888888887753 3334432211
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPP 450 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p 450 (489)
..++++||.+|+. +|.+|++. ..+++|++||||++++|+.+....++
T Consensus 264 s~~~~~li~~l~~-~~~~r~~r-~~~~ei~~hp~f~~~~~~~~~~~~~~ 310 (363)
T cd05628 264 SEKAKDLILRFCC-EWEHRIGA-PGVEEIKTNPFFEGVDWEHIRERPAA 310 (363)
T ss_pred CHHHHHHHHHHcC-ChhhcCCC-CCHHHHhCCCCCCCCCHHHHHhCCCC
Confidence 1258999999885 67777543 24459999999999999988654433
No 30
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.5e-51 Score=416.69 Aligned_cols=315 Identities=34% Similarity=0.608 Sum_probs=237.7
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||+||+|++.. +++.||||++.+...........+..|+.+|..++||||++++++|.+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKD-----TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCe
Confidence 479999999999999999999987 578899999988765555566677889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|||||||+||+|.+++... ..+++..++.|+.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.+..
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred EEEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999999998765 5699999999999999999999999999999999999999999999999999854321
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
...... +.... ................... ..........
T Consensus 154 ~~~~~~----------~~~~~-----~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~ 193 (364)
T cd05599 154 SHRTEF----------YRILS-----HALPSNFLDFISKPMSSKR-------------------------KAETWKRNRR 193 (364)
T ss_pred cccccc----------ccccc-----ccccccccccccccccccc-------------------------cccchhhccc
Confidence 100000 00000 0000000000000000000 0000000001
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC--CCCCCCCCCchhHHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL--TFPRIGVSSSKEFEE 401 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~ 401 (489)
....+.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+..... .+|.... .
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~-------~ 266 (364)
T cd05599 194 ALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVP-------L 266 (364)
T ss_pred ccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCC-------C
Confidence 122346899999999999999999999999999999999999999999888877777765432 2222111 1
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPN 454 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~ 454 (489)
...+++||.+||. +|.+|++. ..+.++++||||++++|..+....+|.+|.
T Consensus 267 s~~~~~li~~ll~-~p~~R~~~-~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~ 317 (364)
T cd05599 267 SPEAKDLIKRLCC-EAERRLGN-NGVNEIKSHPFFKGVDWEHIRERPAPIIPE 317 (364)
T ss_pred CHHHHHHHHHHcc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHHhhcCCCCCCC
Confidence 2258999999996 99999984 344599999999999999887777776665
No 31
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.4e-51 Score=409.97 Aligned_cols=271 Identities=39% Similarity=0.714 Sum_probs=229.4
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||.||+|+++. +++.||||++++..........++..|+.+++.++||||+++++++..++.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKA-----TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEe
Confidence 369999999999999886 578999999998766555566677889999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
|++||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 76 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~------ 147 (323)
T cd05571 76 YANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS------ 147 (323)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc------
Confidence 99999999988765 5799999999999999999999999999999999999999999999999999732100
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
........
T Consensus 148 ------------------------------------------------------------------------~~~~~~~~ 155 (323)
T cd05571 148 ------------------------------------------------------------------------DGATMKTF 155 (323)
T ss_pred ------------------------------------------------------------------------CCCcccce
Confidence 00112345
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLI 409 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li 409 (489)
+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.......+......+|... ..++.+||
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~~li 226 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL---------SPEAKSLL 226 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCC---------CHHHHHHH
Confidence 799999999999999999999999999999999999999999888777777777766665421 12589999
Q ss_pred HHHhhcCcccccCCCC-ChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 410 SKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 410 ~~~L~~dP~~R~~~~~-~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
.+||+.||++|++... .+.++++||||++++|..+ +...||..|.
T Consensus 227 ~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~~ 274 (323)
T cd05571 227 AGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKPQ 274 (323)
T ss_pred HHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 9999999999996432 4569999999999999876 3455554443
No 32
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-52 Score=408.12 Aligned_cols=271 Identities=29% Similarity=0.393 Sum_probs=221.1
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
...+.|+.+++||+|+||.||+|++.. +++.||+|.++.+... .....-..+|+.||++|+||||++|.+...+
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~-----tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l~HpNIikL~eivt~ 187 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLE-----TGKIVALKKVRFDNEK-EGFPITAIREIKILRRLDHPNIIKLEEIVTS 187 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecc-----cCcEEEEEEeecccCC-CcchHHHHHHHHHHHhcCCCcccceeeEEEe
Confidence 345789999999999999999999987 6899999999876533 2344556789999999999999999998876
Q ss_pred C--ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 161 S--HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 161 ~--~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
. ..+|||+|||+ -||..++.. ++-.|++.+++.||.||+.||+|||.+||+|||||..|||||.+|.+||+|||||
T Consensus 188 ~~~~siYlVFeYMd-hDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 188 KLSGSIYLVFEYMD-HDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred cCCceEEEEEeccc-chhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccce
Confidence 5 78999999995 588777654 4568999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+.+.....
T Consensus 266 r~y~~~~~------------------------------------------------------------------------ 273 (560)
T KOG0600|consen 266 RFYTPSGS------------------------------------------------------------------------ 273 (560)
T ss_pred eeccCCCC------------------------------------------------------------------------
Confidence 65542110
Q ss_pred ccccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc--CCC---CCCCCC
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK--KPL---TFPRIG 392 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~--~~~---~~p~~~ 392 (489)
...++.+-|.+|+|||+|+|.. |+.++|+||.||||.||++|++.|.|.++.+++..|.+ +.. .|+...
T Consensus 274 -----~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 274 -----APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred -----cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 1234567899999999999975 89999999999999999999999999999999888864 111 111100
Q ss_pred CCC----------c----hhH-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 393 VSS----------S----KEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 393 ~~~----------~----~~~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.+. . +.+ ..+..+.+|+..||..||.+|.++. ++|+|+||..-.
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~----~aL~seyF~t~p 407 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTAS----SALQSEYFTTEP 407 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHH----HHhcCcccccCC
Confidence 000 0 001 1123478999999999999999998 999999995443
No 33
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.1e-51 Score=417.50 Aligned_cols=325 Identities=34% Similarity=0.609 Sum_probs=238.0
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|.+++.||+|+||+||+|+++. +++.||||++.+...........+.+|+.+++.++||||++++++|.+...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKD-----TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECC-----CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCe
Confidence 479999999999999999999886 578999999987765555666778889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+||||||++||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999999998765 5799999999999999999999999999999999999999999999999999854321
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
..... .+.......... . .................... ...........
T Consensus 154 ~~~~~----------~~~~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 202 (377)
T cd05629 154 QHDSA----------YYQKLLQGKSNK---------N-----RIDNRNSVAVDSINLTMSSK-------DQIATWKKNRR 202 (377)
T ss_pred ccccc----------cccccccccccc---------c-----ccccccccccccccccccch-------hhhhhhhhccc
Confidence 10000 000000000000 0 00000000000000000000 00000000000
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC--CCCCCCCCCCCchhHHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK--PLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~~~~ 401 (489)
....+.+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+..+... ...+|.... .
T Consensus 203 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~-------~ 275 (377)
T cd05629 203 LMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIH-------L 275 (377)
T ss_pred ccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCC-------C
Confidence 1122468999999999999999999999999999999999999999988877777777653 233332211 1
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
..++.+||.+||. +|.+|++. ..+.+++.||||++++|..++.+.+|.+|..
T Consensus 276 s~~~~dli~~lL~-~~~~r~~r-~~~~~~l~hp~~~~~~~~~~~~~~~~~~~~~ 327 (377)
T cd05629 276 SVEAEDLIRRLIT-NAENRLGR-GGAHEIKSHPFFRGVDWDTIRQIRAPFIPQL 327 (377)
T ss_pred CHHHHHHHHHHhc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHHccCCCCcccCC
Confidence 2358999999997 88888743 2345999999999999999998888887764
No 34
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=7.1e-51 Score=404.94 Aligned_cols=276 Identities=36% Similarity=0.686 Sum_probs=233.6
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeecCce
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHY 163 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~ 163 (489)
+|.+++.||+|+||+||+|+++. +++.||||++.+..............|..++..+ +|++|+++++++.+.+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKG-----TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCE
Confidence 58999999999999999999886 5788999999987655445555667788888777 58999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||++||+|...+... ..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999999999888765 5699999999999999999999999999999999999999999999999999732110
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 154 ~------------------------------------------------------------------------------~ 155 (323)
T cd05616 154 D------------------------------------------------------------------------------G 155 (323)
T ss_pred C------------------------------------------------------------------------------C
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+....+..+......+|... ..
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~---------s~ 226 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSM---------SK 226 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcC---------CH
Confidence 012245799999999999999999999999999999999999999999988888888887766665422 12
Q ss_pred hHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
++.+||.+||+.||++|++.. ....++++||||+.++|..+ +...||..|.
T Consensus 227 ~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd05616 227 EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPK 280 (323)
T ss_pred HHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCc
Confidence 589999999999999999974 24569999999999999976 4456666655
No 35
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.5e-51 Score=405.79 Aligned_cols=273 Identities=38% Similarity=0.717 Sum_probs=230.1
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||+||+|+++. +++.||||++.+...........+..|..++..+ +||||+++++++.+.+.+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKE-----SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcC-----CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEE
Confidence 369999999999999886 5788999999887655445566677788888776 6999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 76 Ey~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~---- 149 (320)
T cd05590 76 EFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN---- 149 (320)
T ss_pred cCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC----
Confidence 999999999888765 57999999999999999999999999999999999999999999999999997321100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
......
T Consensus 150 --------------------------------------------------------------------------~~~~~~ 155 (320)
T cd05590 150 --------------------------------------------------------------------------GKTTST 155 (320)
T ss_pred --------------------------------------------------------------------------CCcccc
Confidence 001123
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+......+|... ..++.+|
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~~l 226 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWL---------SQDAVDI 226 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCC---------CHHHHHH
Confidence 4799999999999999999999999999999999999999999998888888887766555421 1258999
Q ss_pred HHHHhhcCcccccCCCC--ChHHHHcCCCcCCCCcccc--ccCCCCCCCCcc
Q 011302 409 ISKLLVKNPKKRIGSLK--GSVEIKRHEFFKGINWALI--RSIKPPEVPNND 456 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~--~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~~ 456 (489)
|.+||+.||++|+++.+ ..+++++||||+.++|..+ +.+.||+.|...
T Consensus 227 i~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~ 278 (320)
T cd05590 227 LKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRIK 278 (320)
T ss_pred HHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCC
Confidence 99999999999999842 2469999999999999876 456677666653
No 36
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-53 Score=379.93 Aligned_cols=261 Identities=29% Similarity=0.497 Sum_probs=228.2
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.+.|++.+.||+|.|+.||++.++. +++.||+|+++...+... ..+.+.+|+.|-+.|+|||||+|.+.+....
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~-----tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~ 83 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKT-----TGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEES 83 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhcc-----chHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccc
Confidence 4789999999999999999998876 678899999987766644 5677888999999999999999999999999
Q ss_pred eEEEEEeecCCCchH-HHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC---CcEEEcccCCC
Q 011302 163 YSCLVMEYCPGGDLY-AARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED---GHIMLSDFDLS 238 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~-~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~---~~vkl~DFG~a 238 (489)
..|||+|++.|++|. ++.++ .-+++..+-.+++||+++|.|+|.+||||||+||+|+|+... -.+||+|||+|
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvA 160 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLA 160 (355)
T ss_pred eeEEEEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceE
Confidence 999999999999996 44444 458999999999999999999999999999999999999643 35999999998
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
..+..
T Consensus 161 i~l~~--------------------------------------------------------------------------- 165 (355)
T KOG0033|consen 161 IEVND--------------------------------------------------------------------------- 165 (355)
T ss_pred EEeCC---------------------------------------------------------------------------
Confidence 43320
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
.....+++|||+|||||++...+|+..+|||+-|||||-||.|.+||.+.+...+++.|..+.+.+|...+....
T Consensus 166 ----g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is- 240 (355)
T KOG0033|consen 166 ----GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVT- 240 (355)
T ss_pred ----ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCC-
Confidence 112345789999999999999999999999999999999999999999999999999999999988875544433
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
+.+++||++||..||.+|+++. |+|+|||+..-+
T Consensus 241 ----~~Ak~LvrrML~~dP~kRIta~----EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 241 ----PEAKSLIRRMLTVNPKKRITAD----EALKHPWICNRE 274 (355)
T ss_pred ----HHHHHHHHHHhccChhhhccHH----HHhCCchhcchH
Confidence 3699999999999999999998 999999997654
No 37
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.6e-51 Score=415.71 Aligned_cols=324 Identities=32% Similarity=0.550 Sum_probs=236.1
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
.|.+++.||+|+||+||+|+++. +++.||||++.+...........+.+|+.+++.++||||++++++|.+++.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVD-----TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECC-----CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEE
Confidence 68999999999999999999886 5789999999887665566677888999999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+|||||+||+|.+++.+. +.+++..++.++.||+.||+|||++|||||||||+|||++.+|++||+|||++..+...
T Consensus 77 ~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999999999998765 56899999999999999999999999999999999999999999999999998543221
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..... +.... ...... ..+.... +...... .+ .................
T Consensus 155 ~~~~~----------~~~~~-----~~~~~~-~~~~~~~-~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~ 203 (382)
T cd05625 155 HDSKY----------YQSGD-----HVRQDS-MDFSNEW-GDPANCR-----------CG---DRLKPLERRAARQHQRC 203 (382)
T ss_pred ccccc----------ccccc-----cccccc-ccccccc-ccccccc-----------cc---ccccchhhhhccccccc
Confidence 11000 00000 000000 0000000 0000000 00 00000000000000111
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC--CCCCCCCCCCchhHHHH
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP--LTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~ 402 (489)
...+.+||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+...++.... ..+|..... .
T Consensus 204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~-------s 276 (382)
T cd05625 204 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKL-------S 276 (382)
T ss_pred cccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccC-------C
Confidence 2345789999999999999999999999999999999999999999988877777776533 223322111 2
Q ss_pred hhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccc-cccCCCCCCCCc
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWAL-IRSIKPPEVPNN 455 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~-~~~~~~p~~~~~ 455 (489)
.++.+||.+|+ .+|++|++. ..+.++++||||++++|.. +....+|.+|..
T Consensus 277 ~~~~~li~~l~-~~p~~R~~~-~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~~ 328 (382)
T cd05625 277 PEASDLIIKLC-RGPEDRLGK-NGADEIKAHPFFKTIDFSSDLRQQSAPYIPKI 328 (382)
T ss_pred HHHHHHHHHHc-cCHhHcCCC-CCHHHHhcCCCcCCcChHHHHhcCCCCccCcC
Confidence 35889999986 599999984 3456999999999999986 455666666554
No 38
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-52 Score=384.26 Aligned_cols=319 Identities=35% Similarity=0.627 Sum_probs=267.9
Q ss_pred hcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCccccc
Q 011302 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLY 155 (489)
Q Consensus 77 ~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~ 155 (489)
..+.+++++|.++++||+|+|++|.+++++. +.+.||+|+++++.....+...-++.|..+.... +||++|.|+
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~-----t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglh 317 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKK-----TDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLH 317 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcc-----cceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehh
Confidence 4567889999999999999999999999987 6899999999999888888888888899888775 699999999
Q ss_pred ceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 156 AEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 156 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
.+|+.+..+++|.||++||+|.-.++++ +.|+++.+++|..+|+.||.|||+.|||+||||.+|+||+..|++||+|+
T Consensus 318 scfqtesrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdy 395 (593)
T KOG0695|consen 318 SCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDY 395 (593)
T ss_pred hhhcccceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeeccc
Confidence 9999999999999999999998777776 68999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+.+. .++
T Consensus 396 gmcke------~l~------------------------------------------------------------------ 403 (593)
T KOG0695|consen 396 GMCKE------GLG------------------------------------------------------------------ 403 (593)
T ss_pred chhhc------CCC------------------------------------------------------------------
Confidence 99631 110
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCC--C------CcHHHHHHHhcCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG--E------NNEKTLINILKKPLT 387 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~--~------~~~~~~~~i~~~~~~ 387 (489)
....+.++||||.|+|||++.|..|+..+|+|+|||+++||+.|+.||+- . ++.-.+.-|+..++.
T Consensus 404 ------~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir 477 (593)
T KOG0695|consen 404 ------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR 477 (593)
T ss_pred ------CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc
Confidence 12245678999999999999999999999999999999999999999962 1 223355667788888
Q ss_pred CCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCC--ChHHHHcCCCcCCCCcccc--ccCCCCCCCCccccccc--
Q 011302 388 FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK--GSVEIKRHEFFKGINWALI--RSIKPPEVPNNDLYCKI-- 461 (489)
Q Consensus 388 ~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~--~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~~~~~~~-- 461 (489)
+|..... .+..+++..|++||.+|++... ++.+++.|+||+.+||+.+ +...||+-|....-...
T Consensus 478 iprslsv---------kas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~~d~~l~~ 548 (593)
T KOG0695|consen 478 IPRSLSV---------KASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQITDDYGLDN 548 (593)
T ss_pred ccceeeh---------hhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCccccccCccc
Confidence 7764433 3678999999999999999753 5789999999999999987 66788888875433321
Q ss_pred ---ccccccCcCcccccCCCCCCCCCCCCCC
Q 011302 462 ---KKKVYVPKLSKQERDAPYQIPTHHFDYF 489 (489)
Q Consensus 462 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (489)
.-+.-.++++++.+|..-.|-++-||-|
T Consensus 549 fd~qft~e~~qltpdd~d~i~ridqsefegf 579 (593)
T KOG0695|consen 549 FDTQFTSEPVQLTPDDEDAIKRIDQSEFEGF 579 (593)
T ss_pred cccccccCCcccCCCCHHHHHhcchhhcCcc
Confidence 1233455677777777777777777765
No 39
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.6e-51 Score=408.81 Aligned_cols=277 Identities=35% Similarity=0.582 Sum_probs=235.7
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||.||+|++.. +++.||||++.+...........+..|+.++..++||||+++++++.+++.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKD-----TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECC-----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCE
Confidence 479999999999999999999886 567899999998766555566778889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.||||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999999998765 5689999999999999999999999999999999999999999999999999832210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
T Consensus 154 -------------------------------------------------------------------------------- 153 (333)
T cd05600 154 -------------------------------------------------------------------------------- 153 (333)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC--CCCCCCCCCchhHHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL--TFPRIGVSSSKEFEE 401 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~ 401 (489)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+..... ..|...... ...
T Consensus 154 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~ 229 (333)
T cd05600 154 -YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPR---FNL 229 (333)
T ss_pred -ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccc---ccc
Confidence 11234799999999999999999999999999999999999999999888777766654322 222211100 112
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
..++.+||.+||..+|.+|+++. ++++||||+.++|..+....||.+|..
T Consensus 230 s~~~~~li~~~l~~~~~rr~s~~----~ll~h~~~~~~~~~~~~~~~~~~~~~~ 279 (333)
T cd05600 230 SDEAWDLITKLINDPSRRFGSLE----DIKNHPFFKEVDWNELRELKPPFVPEL 279 (333)
T ss_pred CHHHHHHHHHHhhChhhhcCCHH----HHHhCcccCCCCHHHHhhCCCCCCCCC
Confidence 23589999999999999999987 999999999999999888888877663
No 40
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.3e-50 Score=403.15 Aligned_cols=275 Identities=39% Similarity=0.715 Sum_probs=230.2
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHH---HhCCCCCcccccceeecCc
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL---TMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l---~~l~hpnIv~l~~~~~~~~ 162 (489)
|++++.||+|+||.||+|.++. +++.||||++++...........+..|+.++ +.++||||+++++++.+.+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKK-----TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC
Confidence 7889999999999999999886 5788999999877654445556666676655 4567999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.+|+||||++||+|...+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 99999999999999887754 469999999999999999999999999999999999999999999999999873211
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
. .
T Consensus 153 ~------------------------------------------------------------------------------~ 154 (324)
T cd05589 153 G------------------------------------------------------------------------------F 154 (324)
T ss_pred C------------------------------------------------------------------------------C
Confidence 0 0
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~ 402 (489)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+......+|... .
T Consensus 155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~---------~ 225 (324)
T cd05589 155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL---------S 225 (324)
T ss_pred CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCC---------C
Confidence 0112345799999999999999999999999999999999999999999888888888877666555322 1
Q ss_pred hhHHHHHHHHhhcCcccccCCCC-ChHHHHcCCCcCCCCcccc--ccCCCCCCCCc
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALI--RSIKPPEVPNN 455 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~-~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~ 455 (489)
..+.+||.+||+.||.+||+..+ .+.++++||||++++|..+ +...||.+|..
T Consensus 226 ~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~ 281 (324)
T cd05589 226 REAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFVPTI 281 (324)
T ss_pred HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHhCCCCcCccCCC
Confidence 24889999999999999998654 4789999999999999865 44556665543
No 41
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-53 Score=409.15 Aligned_cols=285 Identities=36% Similarity=0.676 Sum_probs=254.2
Q ss_pred hhcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccc
Q 011302 76 RAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLY 155 (489)
Q Consensus 76 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 155 (489)
.....+.+.+++.+..||-|+||.|-+++.+. ....+|+|++++..+....+.+.+..|..+|..++.|+||+||
T Consensus 412 ~e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~-----~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLY 486 (732)
T KOG0614|consen 412 EEFAQVKLSDLKRIATLGVGGFGRVELVKVNS-----QKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLY 486 (732)
T ss_pred hhhcccchhhhhhhhhcccCccceEEEEEecc-----cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHH
Confidence 34456778899999999999999999998876 2335899999999888777788889999999999999999999
Q ss_pred ceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 156 AEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 156 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
..|.+..++|++||-|-||+|+..++.+ +.|.+..+++|+..+++|++|||++|||+|||||+|+|++.+|.+||.||
T Consensus 487 rTfrd~kyvYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDF 564 (732)
T KOG0614|consen 487 RTFRDSKYVYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDF 564 (732)
T ss_pred HHhccchhhhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeeh
Confidence 9999999999999999999999999876 78999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+|+.+..
T Consensus 565 GFAKki~~------------------------------------------------------------------------ 572 (732)
T KOG0614|consen 565 GFAKKIGS------------------------------------------------------------------------ 572 (732)
T ss_pred hhHHHhcc------------------------------------------------------------------------
Confidence 99955421
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC--CCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP--LTFPRIGV 393 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~ 393 (489)
+.++-++||||.|.|||++.+.+++.++|.||||+++||||+|.+||.+.++..++..|+++. +.+|....
T Consensus 573 -------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~ 645 (732)
T KOG0614|consen 573 -------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRIT 645 (732)
T ss_pred -------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccc
Confidence 345678999999999999999999999999999999999999999999999999999999864 45564433
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCCc
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPNN 455 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~ 455 (489)
. .+.+||+++...+|.+|++.. .++.+|++|-||.++||+.+ +.+.||++|..
T Consensus 646 k---------~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~v 701 (732)
T KOG0614|consen 646 K---------TATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSV 701 (732)
T ss_pred h---------hHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccC
Confidence 3 378999999999999999965 57889999999999999977 55778877765
No 42
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1e-51 Score=373.11 Aligned_cols=266 Identities=30% Similarity=0.420 Sum_probs=218.8
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|..+++||+|.||.||+|++.. +++.||||.++..... ........+|+.+|+.++|+||+.|+++|...+.
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~-----t~~~VAIKKIkl~~~k-dGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~ 75 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTE-----TGKRVAIKKIKLGNAK-DGINRTALREIKLLQELKHPNIIELIDVFPHKSN 75 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecC-----CCcEEEEEEeeccccc-cCccHHHHHHHHHHHHccCcchhhhhhhccCCCc
Confidence 468889999999999999999887 6889999999866332 2233456789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+.||+||+ ..+|+..++.. ...|+...++.|+.++++||+|||++.|+||||||.|+||+.+|.+||+|||+|+.+..
T Consensus 76 l~lVfEfm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 76 LSLVFEFM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred eEEEEEec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 99999999 67999888765 47899999999999999999999999999999999999999999999999999954421
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. +
T Consensus 154 p------------------------------------------------------------------------------~ 155 (318)
T KOG0659|consen 154 P------------------------------------------------------------------------------N 155 (318)
T ss_pred C------------------------------------------------------------------------------C
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC-----CCCCCCCCCC-Cc
Q 011302 324 ARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK-----PLTFPRIGVS-SS 396 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~-----~~~~p~~~~~-~~ 396 (489)
.....-+-|.+|+|||.+.|.. |+..+||||.|||+.||+.|.+-|.|.++.+++..|.+. +-.||..... ..
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 1111226799999999999865 899999999999999999999999999999888887641 1122221100 00
Q ss_pred h------------hH-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 397 K------------EF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 397 ~------------~~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
. .| ....++.||+.+||..||.+|+++. |+++|+||++.
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~----qaL~~~yf~~~ 287 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITAS----QALKHPYFKSL 287 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHH----HHhcchhhhcC
Confidence 0 01 1223578999999999999999998 99999999874
No 43
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.6e-50 Score=402.58 Aligned_cols=276 Identities=36% Similarity=0.691 Sum_probs=231.9
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCC-CcccccceeecCce
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP-FLPTLYAEFEASHY 163 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp-nIv~l~~~~~~~~~ 163 (489)
+|++++.||+|+||.||+|++++ +++.||||++.+...........+..|..++..++|+ +|+++++++.+.+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKG-----TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCE
Confidence 58999999999999999999887 5678999999987655455566777899999999765 68899999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||++||+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999999999888765 5689999999999999999999999999999999999999999999999999732110
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 154 ~------------------------------------------------------------------------------~ 155 (324)
T cd05587 154 G------------------------------------------------------------------------------G 155 (324)
T ss_pred C------------------------------------------------------------------------------C
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+......+|... ..
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~---------~~ 226 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSL---------SK 226 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCC---------CH
Confidence 011234799999999999999999999999999999999999999999988888888887766555422 12
Q ss_pred hHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
.+.+||.+||..||.+|++.. ...+++++||||+.++|..+ +.+.+|..|.
T Consensus 227 ~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd05587 227 EAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPK 280 (324)
T ss_pred HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCccCc
Confidence 488999999999999999974 34469999999999999876 3344554444
No 44
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.5e-50 Score=400.60 Aligned_cols=268 Identities=40% Similarity=0.731 Sum_probs=227.6
Q ss_pred eccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeec
Q 011302 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (489)
Q Consensus 92 lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 171 (489)
||+|+||.||+|++.. +++.||+|++.+...........+..|+.+++.++||||+++++++.+.+.+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRD-----TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCC
Confidence 7999999999999886 56789999998776555556667788999999999999999999999999999999999
Q ss_pred CCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCc
Q 011302 172 PGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPK 251 (489)
Q Consensus 172 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 251 (489)
+||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 76 ~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------- 146 (312)
T cd05585 76 NGGELFHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD------- 146 (312)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC-------
Confidence 999999988765 57999999999999999999999999999999999999999999999999997321100
Q ss_pred chhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccC
Q 011302 252 LSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVG 331 (489)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 331 (489)
.......+|
T Consensus 147 -----------------------------------------------------------------------~~~~~~~~g 155 (312)
T cd05585 147 -----------------------------------------------------------------------DDKTNTFCG 155 (312)
T ss_pred -----------------------------------------------------------------------CCccccccC
Confidence 011234579
Q ss_pred CCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHH
Q 011302 332 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISK 411 (489)
Q Consensus 332 t~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~ 411 (489)
|+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+......+|.... ..+.+||.+
T Consensus 156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~li~~ 226 (312)
T cd05585 156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFD---------RDAKDLLIG 226 (312)
T ss_pred CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCC---------HHHHHHHHH
Confidence 99999999999999999999999999999999999999998888888888887766654321 258999999
Q ss_pred HhhcCcccccCCCCChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 412 LLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 412 ~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
||..||.+|++.. .+.+++.||||+..+|..+ +.+.++..|.
T Consensus 227 ~L~~dp~~R~~~~-~~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~ 270 (312)
T cd05585 227 LLSRDPTRRLGYN-GAQEIKNHPFFSQLSWKKLLMKGIQPPFKPA 270 (312)
T ss_pred HcCCCHHHcCCCC-CHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 9999999999863 4569999999999998755 3444544433
No 45
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-52 Score=409.49 Aligned_cols=256 Identities=27% Similarity=0.441 Sum_probs=220.7
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
...|....+||+|+.|.||.|+... +++.||||.+....... .+-+.+|+.+|+..+|+|||.+++.|..++
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~-----~~~~VaiK~m~l~~Q~~---keLilnEi~Vm~~~~H~NiVnfl~Sylv~d 343 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKIS-----TKQEVAIKRMDLRKQPK---KELLLNEILVMRDLHHPNIVNFLDSYLVGD 343 (550)
T ss_pred hhhhcchhhhccccccceeeeeecc-----CCceEEEEEEEeccCCc---hhhhHHHHHHHHhccchHHHHHHHHhcccc
Confidence 4678889999999999999999887 56779999998665432 345677999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.+++||||++||+|.+.+... .++|.++..|+++++.||+|||.+||||||||.+|||++.+|.+||+|||++..+.
T Consensus 344 eLWVVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 344 ELWVVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS 420 (550)
T ss_pred eeEEEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccc
Confidence 999999999999999998764 59999999999999999999999999999999999999999999999999973322
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
. .
T Consensus 421 ~------------------------------------------------------------------------------~ 422 (550)
T KOG0578|consen 421 E------------------------------------------------------------------------------E 422 (550)
T ss_pred c------------------------------------------------------------------------------c
Confidence 1 1
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC-CCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK-PLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~~~~ 401 (489)
..+..+.+|||+|||||++....|++++||||||++++||+-|++||...+....+..|... ...+......+
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS------ 496 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLS------ 496 (550)
T ss_pred cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccC------
Confidence 12456779999999999999999999999999999999999999999998888877777653 33333222222
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
..++|||.+||+.|+++|+++. +||+||||+.
T Consensus 497 -~~~kdFL~~cL~~dv~~RasA~----eLL~HpFl~~ 528 (550)
T KOG0578|consen 497 -PELKDFLDRCLVVDVEQRASAK----ELLEHPFLKM 528 (550)
T ss_pred -HHHHHHHHHHhhcchhcCCCHH----HHhcChhhhh
Confidence 3589999999999999999998 9999999954
No 46
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-50 Score=390.14 Aligned_cols=277 Identities=27% Similarity=0.378 Sum_probs=232.7
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
+....++|.+...||.|.-++||+|++.. .+.+||||+++.+.... .+..+.+|+..|+.++||||++++.+|
T Consensus 21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p-----~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sF 93 (516)
T KOG0582|consen 21 FPLNAKDYELQEVIGVGASAVVYLARCIP-----TNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSF 93 (516)
T ss_pred CCCCccceeEEEEEeccceeEeeeeeecc-----cCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEE
Confidence 45567899999999999999999999987 57899999999887663 377888899999999999999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
..+..+|+||.||.+|++.+++.......|.|..+..|++++++||.|||.+|.||||||+.||||+.+|.|||+|||.+
T Consensus 94 vv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvs 173 (516)
T KOG0582|consen 94 VVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVS 173 (516)
T ss_pred EecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceee
Confidence 99999999999999999999998876667999999999999999999999999999999999999999999999999986
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
..+.. +|. +
T Consensus 174 a~l~~----------------------------------------~G~---------------------R---------- 182 (516)
T KOG0582|consen 174 ASLFD----------------------------------------SGD---------------------R---------- 182 (516)
T ss_pred eeecc----------------------------------------cCc---------------------e----------
Confidence 32211 000 0
Q ss_pred ccccccCCccccCCCCccCcchhcC--CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCc
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSS 396 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~ 396 (489)
...+..+++|||+|||||++.. .+|+.|+||||||++..||.+|..||....+.+++..-+.+....+.......
T Consensus 183 ---~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~ 259 (516)
T KOG0582|consen 183 ---QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDK 259 (516)
T ss_pred ---eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCCh
Confidence 0012267799999999999764 46899999999999999999999999999988888777776655444222221
Q ss_pred hhH-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 397 KEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 397 ~~~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
+.. .....++.+|..||++||.+||++. ++|+|+||+...
T Consensus 260 d~~k~~~ksf~e~i~~CL~kDP~kRptAs----kLlkh~FFk~~k 300 (516)
T KOG0582|consen 260 DEDKKFSKSFREMIALCLVKDPSKRPTAS----KLLKHAFFKKAK 300 (516)
T ss_pred HHhhhhcHHHHHHHHHHhhcCcccCCCHH----HHhccHHHhhcc
Confidence 111 1123578999999999999999998 999999998753
No 47
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.5e-50 Score=408.63 Aligned_cols=306 Identities=32% Similarity=0.586 Sum_probs=233.3
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||+||+|+++. +++.||||++.+...........+..|+.++..++||||+++++++.+++.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKD-----TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 479999999999999999999887 578999999987765555666778889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|||||||+||+|.+++... ..+++..++.++.|++.||+|||++|||||||||+|||++.+|.+||+|||+++.+..
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred EEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999999998765 5699999999999999999999999999999999999999999999999999854321
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
..... .+.... ...+....+..... .. ..........
T Consensus 154 ~~~~~----------~~~~~~------~~~~~~~~~~~~~~---~~------------------------~~~~~~~~~~ 190 (360)
T cd05627 154 AHRTE----------FYRNLT------HNPPSDFSFQNMNS---KR------------------------KAETWKKNRR 190 (360)
T ss_pred ccccc----------cccccc------cCCccccccccccc---cc------------------------cccccccccc
Confidence 10000 000000 00000000000000 00 0000000111
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC--CCCCCCCCCCchhHHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP--LTFPRIGVSSSKEFEE 401 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~ 401 (489)
....+.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+....+.++.... ..+|.... .
T Consensus 191 ~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~-------~ 263 (360)
T cd05627 191 QLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVP-------I 263 (360)
T ss_pred ccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCC-------C
Confidence 22345689999999999999999999999999999999999999999988888777776532 33333211 1
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIK 448 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~ 448 (489)
..++++||.+|+. ||.+|++. ..+.++++||||++++|..+....
T Consensus 264 s~~~~~li~~l~~-~p~~R~~~-~~~~ei~~hp~f~~~~~~~~~~~~ 308 (360)
T cd05627 264 SEKAKDLILRFCT-DSENRIGS-NGVEEIKSHPFFEGVDWGHIRERP 308 (360)
T ss_pred CHHHHHHHHHhcc-ChhhcCCC-CCHHHHhcCCCCCCCCHHHHhcCC
Confidence 2258999999874 99999985 356699999999999999885543
No 48
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.6e-50 Score=411.55 Aligned_cols=321 Identities=31% Similarity=0.520 Sum_probs=232.1
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
.|++++.||+|+||+||+|+++. +++.||||++.+...........+..|+.+++.++||||+++++++.+.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVD-----THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEE
Confidence 68999999999999999999887 5789999999987766566677888999999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+|||||+||+|.+++.+. ..+++..++.++.||+.||+|||++|||||||||+||||+.+|++||+|||+++.+...
T Consensus 77 ~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred EEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999998765 56899999999999999999999999999999999999999999999999998543221
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
.... +......-....+.+...+ ..... ....... ..+.. .........
T Consensus 155 ~~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~-------~~~~~-~~~~~~~~~ 203 (381)
T cd05626 155 HNSK-----------YYQKGSHIRQDSMEPSDLW-DDVSN-----------CRCGDRL-------KTLEQ-RATKQHQRC 203 (381)
T ss_pred cccc-----------cccccccccccccCccccc-ccccc-----------ccccccc-------chhhc-ccccccccc
Confidence 1000 0000000000000000000 00000 0000000 00000 000001111
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC--CCCCCCCCCCCchhHHHH
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK--PLTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~~~~~ 402 (489)
...+++||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+...++... ...+|..... .
T Consensus 204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-------s 276 (381)
T cd05626 204 LAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKL-------S 276 (381)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCC-------C
Confidence 234678999999999999999999999999999999999999999988877666666542 2333322111 2
Q ss_pred hhHHHHHHHHhhc--CcccccCCCCChHHHHcCCCcCCCCcccc-ccCCCCCCCC
Q 011302 403 VKLQDLISKLLVK--NPKKRIGSLKGSVEIKRHEFFKGINWALI-RSIKPPEVPN 454 (489)
Q Consensus 403 ~~l~~li~~~L~~--dP~~R~~~~~~~~~ll~hp~f~~~~~~~~-~~~~~p~~~~ 454 (489)
.++.+||.+||.. ++..|+++. +++.||||+.++|... +...+|.+|.
T Consensus 277 ~~~~dli~~ll~~~~~~~~R~~~~----~~l~hp~f~~~~~~~~~~~~~~~~~p~ 327 (381)
T cd05626 277 PEAVDLITKLCCSAEERLGRNGAD----DIKAHPFFSEVDFSSDIRTQPAPYVPK 327 (381)
T ss_pred HHHHHHHHHHccCcccccCCCCHH----HHhcCcccCCCChhHHhhcCCCCccCc
Confidence 3589999997654 444588887 9999999999999864 4455555555
No 49
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=8.4e-51 Score=412.92 Aligned_cols=320 Identities=32% Similarity=0.543 Sum_probs=233.2
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||.||+|++.. +++.||||++.+...........+.+|+.+|+.++||||+++++.|.+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVD-----TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECC-----CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCE
Confidence 479999999999999999999886 578999999987766555566778889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+|||||+||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..+..
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999999998775 5689999999999999999999999999999999999999999999999999854322
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
...... +.... ................... ... ....... .....
T Consensus 154 ~~~~~~----------~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~--------------~~~~~~~-~~~~~ 198 (376)
T cd05598 154 THDSKY----------YQKGD-----HHRQDSMEPSEEWSEIDRC-----RLK--------------PLERRRK-RQHQR 198 (376)
T ss_pred cccccc----------ccccc-----ccccccccccccccccccc-----ccc--------------chhhhhh-hhccc
Confidence 110000 00000 0000000000000000000 000 0000000 00001
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC--CCCCCCCCchhHHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT--FPRIGVSSSKEFEE 401 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~~~~ 401 (489)
....+++||+.|||||++.+..++.++|||||||++|||++|+.||.+.+..+....+...... +|.... .
T Consensus 199 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~-------~ 271 (376)
T cd05598 199 CLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAK-------L 271 (376)
T ss_pred ccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCC-------C
Confidence 2234578999999999999999999999999999999999999999998877766666543222 222111 1
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc-ccCCCCCCCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI-RSIKPPEVPN 454 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~-~~~~~p~~~~ 454 (489)
...+.+||.+|+ .+|.+|++.. .+.++++||||++++|..+ ....+|.+|.
T Consensus 272 s~~~~~li~~l~-~~p~~R~~~~-t~~ell~h~~~~~~~~~~~~~~~~~~~~~~ 323 (376)
T cd05598 272 SREASDLILRLC-CGAEDRLGKN-GADEIKAHPFFKGIDFASLIRRQKAPYIPK 323 (376)
T ss_pred CHHHHHHHHHHh-cCHhhcCCCC-CHHHHhCCCCcCCCCHHHHhhcCCCCCCCc
Confidence 225789999976 5999999431 2349999999999999877 5555665554
No 50
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.5e-50 Score=401.77 Aligned_cols=271 Identities=40% Similarity=0.733 Sum_probs=227.5
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||.||+|+++. +++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKA-----SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEe
Confidence 368999999999999886 578999999988765555566778889999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
|+++|+|..++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 76 y~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~----- 148 (328)
T cd05593 76 YVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD----- 148 (328)
T ss_pred CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-----
Confidence 99999999888765 57999999999999999999999999999999999999999999999999997321100
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
.......
T Consensus 149 -------------------------------------------------------------------------~~~~~~~ 155 (328)
T cd05593 149 -------------------------------------------------------------------------AATMKTF 155 (328)
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0011235
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLI 409 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li 409 (489)
+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+....+......+|... ..++.+||
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~~li 226 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTL---------SADAKSLL 226 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCC---------CHHHHHHH
Confidence 799999999999999999999999999999999999999998888777777776666555422 12589999
Q ss_pred HHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 410 SKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 410 ~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
.+||+.||++|++.. ..+.++++||||.+++|..+ ..+.+|..|.
T Consensus 227 ~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~ 274 (328)
T cd05593 227 SGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQ 274 (328)
T ss_pred HHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCc
Confidence 999999999998543 34569999999999999866 3344554443
No 51
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.4e-51 Score=381.30 Aligned_cols=280 Identities=26% Similarity=0.327 Sum_probs=224.0
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
.-..++|+.+.+|++|+||.||+|+++. ++..||+|.++-+... ....-...+|+.+|.+++|||||.+-++..
T Consensus 72 Crsv~efe~lnrI~EGtyGiVYRakdk~-----t~eIVALKr~kmekek-~GFPItsLREIniLl~~~H~NIV~vkEVVv 145 (419)
T KOG0663|consen 72 CRSVEEFEKLNRIEEGTYGVVYRAKDKK-----TDEIVALKRLKMEKEK-EGFPITSLREINILLKARHPNIVEVKEVVV 145 (419)
T ss_pred cccHHHHHHHhhcccCcceeEEEeccCC-----cceeEEeeeccccccc-CCCcchhHHHHHHHHhcCCCCeeeeEEEEe
Confidence 3456889999999999999999999998 6899999999865421 222333567999999999999999999875
Q ss_pred --cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCC
Q 011302 160 --ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 160 --~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~ 237 (489)
+-+.+||||||| .-||..++...+ .+|...+++.++.|++.||+|||.+.|+|||||++|+|++..|.+||+|||+
T Consensus 146 G~~~d~iy~VMe~~-EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 146 GSNMDKIYIVMEYV-EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred ccccceeeeeHHHH-HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccch
Confidence 445799999999 469999888764 6899999999999999999999999999999999999999999999999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
|+.+....
T Consensus 224 AR~ygsp~------------------------------------------------------------------------ 231 (419)
T KOG0663|consen 224 AREYGSPL------------------------------------------------------------------------ 231 (419)
T ss_pred hhhhcCCc------------------------------------------------------------------------
Confidence 96553211
Q ss_pred cccccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC--C---CCCCCC
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK--P---LTFPRI 391 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~---~~~p~~ 391 (489)
...+..+-|.+|+|||++.|.. |++++|+||+|||+.||+++++.|.|..+.+++.+|... . -.||-.
T Consensus 232 ------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~ 305 (419)
T KOG0663|consen 232 ------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGY 305 (419)
T ss_pred ------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCc
Confidence 1234567899999999999976 899999999999999999999999999999888888641 0 011111
Q ss_pred CCC---------------CchhHHH---HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCC
Q 011302 392 GVS---------------SSKEFEE---VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKP 449 (489)
Q Consensus 392 ~~~---------------~~~~~~~---~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~ 449 (489)
... -...|.. .....+|+.++|.+||.+|.|+. +.|+|+||.......-+...|
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~----~~L~h~~F~e~P~p~~P~~~P 377 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAE----DGLKHEYFRETPLPIDPSMFP 377 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHH----HhhcccccccCCCCCChhhcC
Confidence 000 0011111 13567999999999999999998 999999998865433333333
No 52
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.6e-50 Score=399.03 Aligned_cols=271 Identities=39% Similarity=0.710 Sum_probs=227.6
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||.||+|+++. ++..||+|++.++..........+.+|+.+++.++||||++++++|...+.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKA-----TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEe
Confidence 469999999999999876 578999999998765555556677789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
|++||+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 76 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~----- 148 (323)
T cd05595 76 YANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD----- 148 (323)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC-----
Confidence 99999999888765 57999999999999999999999999999999999999999999999999987321000
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
.......
T Consensus 149 -------------------------------------------------------------------------~~~~~~~ 155 (323)
T cd05595 149 -------------------------------------------------------------------------GATMKTF 155 (323)
T ss_pred -------------------------------------------------------------------------CCccccc
Confidence 0011234
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLI 409 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li 409 (489)
+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.......+......+|... ...+.+||
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~~li 226 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTL---------SPEAKSLL 226 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCC---------CHHHHHHH
Confidence 799999999999999999999999999999999999999998888887777777666555421 12589999
Q ss_pred HHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 410 SKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 410 ~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
.+||+.||++|++.. ..+.++++||||.+++|..+ ..+.||..+.
T Consensus 227 ~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~ 274 (323)
T cd05595 227 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQ 274 (323)
T ss_pred HHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 999999999999643 24569999999999999875 3344554443
No 53
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.1e-50 Score=399.10 Aligned_cols=271 Identities=37% Similarity=0.720 Sum_probs=227.6
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||.||+|+++. +++.||||++.+...........+..|..++..+ +||||+++++++.+++.+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKG-----TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECC-----CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEE
Confidence 369999999999999886 5788999999887655455566677788888865 7999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 76 E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~---- 149 (321)
T cd05591 76 EYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN---- 149 (321)
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC----
Confidence 999999999888765 57999999999999999999999999999999999999999999999999997321100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
......
T Consensus 150 --------------------------------------------------------------------------~~~~~~ 155 (321)
T cd05591 150 --------------------------------------------------------------------------GVTTTT 155 (321)
T ss_pred --------------------------------------------------------------------------Cccccc
Confidence 001223
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+......+|.... .++.+|
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~---------~~~~~l 226 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLS---------KEAVSI 226 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCC---------HHHHHH
Confidence 57999999999999999999999999999999999999999999988888888887666554321 248999
Q ss_pred HHHHhhcCcccccCCCC---ChHHHHcCCCcCCCCccccc--cCCCCCCCC
Q 011302 409 ISKLLVKNPKKRIGSLK---GSVEIKRHEFFKGINWALIR--SIKPPEVPN 454 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~---~~~~ll~hp~f~~~~~~~~~--~~~~p~~~~ 454 (489)
|.+||+.||++|++... .++++++||||+.++|..+. ...+|+.|.
T Consensus 227 l~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T cd05591 227 LKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPK 277 (321)
T ss_pred HHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCC
Confidence 99999999999997544 46699999999999998763 344444433
No 54
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=5.4e-50 Score=398.59 Aligned_cols=271 Identities=40% Similarity=0.704 Sum_probs=227.0
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHH-HHHhCCCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-ILTMLDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||+||+|+++. +++.||||++.+..........++..|.. +++.++||||+++++++.+.+.+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKA-----DGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEE
Confidence 469999999999999886 57889999998776554444455555554 567899999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 76 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~----- 148 (323)
T cd05575 76 DYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE----- 148 (323)
T ss_pred cCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc-----
Confidence 999999999988765 5799999999999999999999999999999999999999999999999999732100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
.......
T Consensus 149 -------------------------------------------------------------------------~~~~~~~ 155 (323)
T cd05575 149 -------------------------------------------------------------------------HSKTTST 155 (323)
T ss_pred -------------------------------------------------------------------------CCCcccc
Confidence 0011223
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+.......+... ...+.+|
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~~l 226 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNI---------SVSARHL 226 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCC---------CHHHHHH
Confidence 4799999999999999999999999999999999999999999888888888877665544321 1248999
Q ss_pred HHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 409 ISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
|.+||+.||.+|+++...+.+++.||||..++|..+ ..+.+|..|.
T Consensus 227 i~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (323)
T cd05575 227 LEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKITPPFNPN 274 (323)
T ss_pred HHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhhccCCCCcCCC
Confidence 999999999999999888889999999999999876 3455555444
No 55
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.9e-50 Score=406.26 Aligned_cols=304 Identities=39% Similarity=0.657 Sum_probs=239.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|.+++.||+|+||+||+|++.. +++.||||++.+...........+..|+.++..++||||+++++++.++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKD-----TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECC-----CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCe
Confidence 479999999999999999999886 578999999998766555566678889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||++||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+..
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 99999999999999998876 6799999999999999999999999999999999999999999999999999854432
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
......... ... .... .... ... ........
T Consensus 154 ~~~~~~~~~----------~~~--------~~~~-~~~~-----------------------------~~~-~~~~~~~~ 184 (350)
T cd05573 154 AKDREYYLN----------DSH--------NLLF-RDNV-----------------------------LVR-RRDHKQRR 184 (350)
T ss_pred cCccccccc----------ccc--------cccc-cccc-----------------------------ccc-cccccccc
Confidence 110000000 000 0000 0000 000 00000001
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc--CCCCCCCCCCCCchhHHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK--KPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~~~~ 401 (489)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+......++.. ....+|.... .
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~-------~ 257 (350)
T cd05573 185 VRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPP-------V 257 (350)
T ss_pred ccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCC-------C
Confidence 123345799999999999999999999999999999999999999999888777777766 3344443322 1
Q ss_pred HhhHHHHHHHHhhcCcccccC-CCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 402 VVKLQDLISKLLVKNPKKRIG-SLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~-~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
...+.+||.+||. ||.+|++ +. ++++||||++++|+.+....+|.+|..
T Consensus 258 ~~~~~~li~~ll~-dp~~R~~s~~----~ll~hp~~~~~~~~~~~~~~~~~~~~~ 307 (350)
T cd05573 258 SPEAIDLICRLLC-DPEDRLGSFE----EIKSHPFFKGIDWENLRETKPPFVPEL 307 (350)
T ss_pred CHHHHHHHHHHcc-ChhhcCCCHH----HHhcCCCcCCCCHHHHhhCCCCcCCCC
Confidence 2358999999997 9999999 76 999999999999998887777776654
No 56
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=7.4e-50 Score=396.34 Aligned_cols=268 Identities=36% Similarity=0.736 Sum_probs=222.2
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHh-CCCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM-LDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||.||+|+++. +++.||+|++++..............|..++.. ++||||+++++++.+.+++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKG-----KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEE
Confidence 469999999999999886 578899999988755433444556667777765 48999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||+.||+|..++... ..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 76 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~----- 148 (316)
T cd05620 76 EFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF----- 148 (316)
T ss_pred CCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc-----
Confidence 999999999888764 5689999999999999999999999999999999999999999999999998732100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
.......
T Consensus 149 -------------------------------------------------------------------------~~~~~~~ 155 (316)
T cd05620 149 -------------------------------------------------------------------------GDNRAST 155 (316)
T ss_pred -------------------------------------------------------------------------CCCceec
Confidence 0011234
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+......+|... ..++++|
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l 226 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWI---------TKESKDI 226 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCC---------CHHHHHH
Confidence 5799999999999999999999999999999999999999999888877777766555444321 1248999
Q ss_pred HHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 409 ISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
|.+||+.||++|+++. +++++||||+.++|..+ ....+|..|.
T Consensus 227 i~~~l~~dP~~R~~~~---~~~~~h~~f~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05620 227 LEKLFERDPTRRLGVV---GNIRGHPFFKTINWTALEKRELDPPFKPK 271 (316)
T ss_pred HHHHccCCHHHcCCCh---HHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 9999999999999974 27889999999999875 3444555444
No 57
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.5e-49 Score=395.42 Aligned_cols=276 Identities=36% Similarity=0.695 Sum_probs=233.1
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCce
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHY 163 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~ 163 (489)
+|.+.+.||+|+||+||+|+++. +++.||||++.+...........+..|..++..+. |++|+++++++.+.+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKG-----TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCE
Confidence 47889999999999999999886 57899999999876554455566777888888876 5778899999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||++||+|.+++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999999999988765 5699999999999999999999999999999999999999999999999999732110
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 154 ~------------------------------------------------------------------------------~ 155 (323)
T cd05615 154 D------------------------------------------------------------------------------G 155 (323)
T ss_pred C------------------------------------------------------------------------------C
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.......+......+|.... .
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~---------~ 226 (323)
T cd05615 156 VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLS---------K 226 (323)
T ss_pred ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCC---------H
Confidence 0122346999999999999999999999999999999999999999999888888888877666554221 2
Q ss_pred hHHHHHHHHhhcCcccccCCCC-ChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~-~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
.+.+|+.+||+.||.+|++..+ ..+++++||||+.++|..+ +.+.+|+.|.
T Consensus 227 ~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd05615 227 EAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKPK 280 (323)
T ss_pred HHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcCccCc
Confidence 4889999999999999999753 4579999999999999877 4455666654
No 58
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.9e-50 Score=395.75 Aligned_cols=268 Identities=38% Similarity=0.755 Sum_probs=221.6
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHh-CCCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM-LDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||.||+|+++. +++.||||+++++.............|..++.. .+||||+++++++..++.+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKG-----TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence 369999999999999887 578899999988765444445555667777765 48999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 76 e~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~---- 149 (316)
T cd05592 76 EYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG---- 149 (316)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC----
Confidence 999999999988765 57999999999999999999999999999999999999999999999999997321100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
......
T Consensus 150 --------------------------------------------------------------------------~~~~~~ 155 (316)
T cd05592 150 --------------------------------------------------------------------------EGKAST 155 (316)
T ss_pred --------------------------------------------------------------------------CCcccc
Confidence 011234
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+......+|... ..++.+|
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~~l 226 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWI---------SKEAKDC 226 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCC---------CHHHHHH
Confidence 5799999999999999999999999999999999999999999888888877776554444321 1248899
Q ss_pred HHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccc--cCCCCCCCC
Q 011302 409 ISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR--SIKPPEVPN 454 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~--~~~~p~~~~ 454 (489)
|.+||+.||++|+++. ++++.||||+.++|..+. .+.||+.|.
T Consensus 227 l~~~l~~~P~~R~~~~---~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05592 227 LSKLFERDPTKRLGVD---GDIRQHPFFRGIDWERLEKREIPPPFKPK 271 (316)
T ss_pred HHHHccCCHHHcCCCh---HHHHcCcccCCCCHHHHHhCCCCCCcCCC
Confidence 9999999999999874 378899999999998763 344444443
No 59
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=7.4e-50 Score=404.43 Aligned_cols=281 Identities=35% Similarity=0.622 Sum_probs=228.0
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
..+..++|++.+.||+|+||.||+|+++. +++.||+|++.+...........+.+|+.+++.++||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~ 112 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKS-----SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF 112 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 44567899999999999999999999987 5788999999876554444455677899999999999999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
.+++.+|+|||||+||+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|
T Consensus 113 ~~~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a 189 (370)
T cd05621 113 QDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred EcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccc
Confidence 9999999999999999999988653 5899999999999999999999999999999999999999999999999998
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
..+...
T Consensus 190 ~~~~~~-------------------------------------------------------------------------- 195 (370)
T cd05621 190 MKMDET-------------------------------------------------------------------------- 195 (370)
T ss_pred eecccC--------------------------------------------------------------------------
Confidence 432100
Q ss_pred ccccccCCccccCCCCccCcchhcCCC----CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC--CCCCCCC
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQG----HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP--LTFPRIG 392 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~ 392 (489)
........+||+.|+|||++.+.. ++.++|||||||++|||++|..||.+.+....+.++.... +.+|...
T Consensus 196 ---~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~ 272 (370)
T cd05621 196 ---GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDV 272 (370)
T ss_pred ---CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcc
Confidence 000123457999999999997653 7889999999999999999999999988888888877643 3333321
Q ss_pred CCCchhHHHHhhHHHHHHHHhhcCccc--ccCCCCChHHHHcCCCcCCCCcc--ccccCCCCCCCCc
Q 011302 393 VSSSKEFEEVVKLQDLISKLLVKNPKK--RIGSLKGSVEIKRHEFFKGINWA--LIRSIKPPEVPNN 455 (489)
Q Consensus 393 ~~~~~~~~~~~~l~~li~~~L~~dP~~--R~~~~~~~~~ll~hp~f~~~~~~--~~~~~~~p~~~~~ 455 (489)
. ....+++||.+||..++.+ |+++. ++++||||+..+|. .++...+|..|..
T Consensus 273 ~-------~s~~~~~li~~~L~~~~~r~~R~~~~----e~l~hp~~~~~~~~~~~~~~~~~~~~p~~ 328 (370)
T cd05621 273 E-------ISKHAKNLICAFLTDREVRLGRNGVE----EIKQHPFFKNDQWNWDNIRETAAPVVPEL 328 (370)
T ss_pred c-------CCHHHHHHHHHHccCchhccCCCCHH----HHhcCcccCCCCcChHhcCCCCCCcCCCC
Confidence 1 1224899999999844432 55655 99999999986654 4556666766654
No 60
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-51 Score=391.07 Aligned_cols=262 Identities=31% Similarity=0.473 Sum_probs=213.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc-
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH- 162 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~- 162 (489)
.++...+.||+|+||.||++.+.+ ++...|||.+...... ..+.+.+|+.+|..++|||||+++|......
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~-----~g~~~AvK~v~~~~~~---~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~ 88 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKK-----TGELMAVKSVELEDSP---TSESLEREIRILSRLNHPNIVQYYGSSSSREN 88 (313)
T ss_pred chhhhhccccCccceEEEEEEecC-----CCcceeeeeeecccch---hHHHHHHHHHHHHhCCCCCEEeeCCccccccC
Confidence 457778899999999999999987 4678999999866222 1556778999999999999999999754444
Q ss_pred -eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc-CCcEEEcccCCCcc
Q 011302 163 -YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE-DGHIMLSDFDLSFK 240 (489)
Q Consensus 163 -~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~-~~~vkl~DFG~a~~ 240 (489)
.+++.|||++||+|.+++.+..+ .|++..++.+.+||++||+|||++|||||||||+||||+. +|.+||+|||+++.
T Consensus 89 ~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 89 DEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 69999999999999999998865 8999999999999999999999999999999999999999 79999999999854
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
.....
T Consensus 168 ~~~~~--------------------------------------------------------------------------- 172 (313)
T KOG0198|consen 168 LESKG--------------------------------------------------------------------------- 172 (313)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 32100
Q ss_pred ccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCC-CCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKG-ENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
........+.||+.|||||++.+. ..+.++|||||||++.||+||.+||.. ....+.+..+.... ..|.+...-+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~P~ip~~ls-- 249 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SLPEIPDSLS-- 249 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CCCCCCcccC--
Confidence 001123456899999999999962 234599999999999999999999987 45555555665544 2232222222
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.++++||.+||.+||++||++. ++|.|||.+...
T Consensus 250 ----~~a~~Fl~~C~~~~p~~Rpta~----eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 250 ----DEAKDFLRKCFKRDPEKRPTAE----ELLEHPFLKQNS 283 (313)
T ss_pred ----HHHHHHHHHHhhcCcccCcCHH----HHhhChhhhccc
Confidence 2589999999999999999998 999999997744
No 61
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.4e-49 Score=396.56 Aligned_cols=271 Identities=37% Similarity=0.695 Sum_probs=221.5
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||.||+|+++. +++.||+|+++++..........+..|..++..+ +||||++++++|.+.+.+||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKK-----TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEE
Confidence 468999999999999887 5788999999987665555566778899999888 6999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
|||+||+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 76 e~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~----- 148 (329)
T cd05588 76 EFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR----- 148 (329)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc-----
Confidence 999999999888765 5799999999999999999999999999999999999999999999999999732100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
.......
T Consensus 149 -------------------------------------------------------------------------~~~~~~~ 155 (329)
T cd05588 149 -------------------------------------------------------------------------PGDTTST 155 (329)
T ss_pred -------------------------------------------------------------------------CCCcccc
Confidence 0011234
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC---------cHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN---------NEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~---------~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+......+|...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------- 228 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSL------- 228 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCC-------
Confidence 579999999999999999999999999999999999999996321 1223444555555555321
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC--CChHHHHcCCCcCCCCccccc--cCCCCCCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL--KGSVEIKRHEFFKGINWALIR--SIKPPEVPN 454 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~--~~~~~ll~hp~f~~~~~~~~~--~~~~p~~~~ 454 (489)
...+.+||.+||+.||.+|+++. ..++++++||||+.++|..+. ...||..|.
T Consensus 229 --~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~~~~~~~ 285 (329)
T cd05588 229 --SVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPN 285 (329)
T ss_pred --CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCCCCCcccc
Confidence 12489999999999999999964 246799999999999998763 344444433
No 62
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.4e-49 Score=401.03 Aligned_cols=284 Identities=35% Similarity=0.639 Sum_probs=231.9
Q ss_pred cCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccce
Q 011302 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (489)
Q Consensus 78 ~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 157 (489)
..++..++|++.+.||+|+||.||+|+++. +++.||+|++.+...........+.+|+.+++.++||||++++++
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~ 111 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKS-----TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 111 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECC-----CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 345677999999999999999999999887 578999999987655444455567789999999999999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCC
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~ 237 (489)
+.+++.+|+|||||+||+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus 112 ~~~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 112 FQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred EEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 9999999999999999999998865 3589999999999999999999999999999999999999999999999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
++......
T Consensus 189 a~~~~~~~------------------------------------------------------------------------ 196 (371)
T cd05622 189 CMKMNKEG------------------------------------------------------------------------ 196 (371)
T ss_pred eeEcCcCC------------------------------------------------------------------------
Confidence 84321100
Q ss_pred cccccccCCccccCCCCccCcchhcCCC----CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC--CCCCCC
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQG----HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP--LTFPRI 391 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~ 391 (489)
.......+||+.|+|||++.+.. ++.++|||||||++|||++|..||.+.+....+.+|.... ..+|..
T Consensus 197 -----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 271 (371)
T cd05622 197 -----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD 271 (371)
T ss_pred -----cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCc
Confidence 00123457999999999997653 7889999999999999999999999988888888887643 333432
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC--ccccccCCCCCCCCc
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN--WALIRSIKPPEVPNN 455 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~--~~~~~~~~~p~~~~~ 455 (489)
... ...+++||.+||. +|..|++. ..++++++|+||++.+ |..++...+|.+|..
T Consensus 272 ~~~-------s~~~~~li~~~L~-~~~~r~~r-~~~~ei~~h~~~~~~~~~~~~~~~~~~~~~~~~ 328 (371)
T cd05622 272 NDI-------SKEAKNLICAFLT-DREVRLGR-NGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDL 328 (371)
T ss_pred CCC-------CHHHHHHHHHHcC-ChhhhcCC-CCHHHHhcCcccCCCChhHHhcCCCCCCCCCCC
Confidence 111 2258999999998 67766553 2455999999998855 456677777777653
No 63
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-50 Score=401.32 Aligned_cols=264 Identities=35% Similarity=0.573 Sum_probs=234.6
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecC
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEAS 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~ 161 (489)
.+.|.+.+.||.|.||.||+|+.+. +++.||+|++.+...........+.+|+.+|+++. |||||.++++|++.
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~-----tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~ 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKS-----TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP 108 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecC-----CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence 3689999999999999999999998 57899999999887765555667888999999998 99999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC----CcEEEcccCC
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED----GHIMLSDFDL 237 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~----~~vkl~DFG~ 237 (489)
..+|+|||+|.||+|++.+... .+++..+..++.|++.+++|||+.||+||||||+|+|+... +.+|++|||+
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred CeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 9999999999999999998876 39999999999999999999999999999999999999743 5799999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
|.....
T Consensus 186 a~~~~~-------------------------------------------------------------------------- 191 (382)
T KOG0032|consen 186 AKFIKP-------------------------------------------------------------------------- 191 (382)
T ss_pred ceEccC--------------------------------------------------------------------------
Confidence 854321
Q ss_pred cccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCch
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
..+....+|||.|+|||++.+.+|+..+||||+||++|.|++|.+||.+.+....+.+|..+.+.++........
T Consensus 192 -----~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is 266 (382)
T KOG0032|consen 192 -----GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDIS 266 (382)
T ss_pred -----CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccC
Confidence 123456799999999999999999999999999999999999999999999999999999998877766555433
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcc
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 442 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~ 442 (489)
..+++||++||..||.+|+++. ++|+|||+++..-.
T Consensus 267 -----~~akd~i~~ll~~dp~~R~ta~----~~L~HpWi~~~~~~ 302 (382)
T KOG0032|consen 267 -----ESAKDFIRKLLEFDPRKRLTAA----QALQHPWIKSIGEA 302 (382)
T ss_pred -----HHHHHHHHHhcccCcccCCCHH----HHhcCccccCCccc
Confidence 3599999999999999999998 99999999876433
No 64
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.3e-50 Score=398.44 Aligned_cols=277 Identities=38% Similarity=0.637 Sum_probs=232.3
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|.+.+.||+|+||+||+|+++. +++.||||++++...........+..|+.+++.++||||+++++++.+.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKA-----TGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCe
Confidence 479999999999999999999886 578999999998766545566678889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||++||+|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..+..
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999999999999987752 4699999999999999999999999999999999999999999999999999843211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.. .
T Consensus 155 ~~-----------------------------------------------------------------------------~ 157 (330)
T cd05601 155 NK-----------------------------------------------------------------------------M 157 (330)
T ss_pred CC-----------------------------------------------------------------------------c
Confidence 00 0
Q ss_pred cCCccccCCCCccCcchhc------CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC--CCCCCCCCCC
Q 011302 324 ARSKSFVGTHEYLAPEVIS------GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP--LTFPRIGVSS 395 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~ 395 (489)
......+||+.|+|||++. +..++.++|||||||++|||++|..||.+.+....+.++.... ..+|....
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~-- 235 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPK-- 235 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCC--
Confidence 0012236899999999997 4557899999999999999999999999888877777776532 23332211
Q ss_pred chhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 396 SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 396 ~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
....+.+||.+||. +|.+|+++. ++++||||+.++|..+....||..|..
T Consensus 236 -----~~~~~~~li~~ll~-~p~~R~t~~----~l~~h~~~~~~~~~~~~~~~~~~~~~~ 285 (330)
T cd05601 236 -----VSSDFLDLIQSLLC-GQKERLGYE----GLCCHPFFSKIDWNNIRNSLPPFVPTL 285 (330)
T ss_pred -----CCHHHHHHHHHHcc-ChhhCCCHH----HHhCCCCcCCCCHHHHhhCCCCccCcC
Confidence 11258999999998 999999997 999999999999999887777766654
No 65
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.3e-52 Score=375.21 Aligned_cols=271 Identities=29% Similarity=0.457 Sum_probs=229.9
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHH-----HHHHHHHHHHHHHHHHHHhC-CCCCcccccce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA-----LAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 157 (489)
+.|.-.+.||.|..+.|.++.++. +++.+|+|++.... .......+.-..|+.+|+++ .||+|+++.++
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~-----t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ 91 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKE-----TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV 91 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcc-----cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence 467778899999999999998887 56778999885321 11334455566799999997 69999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCC
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~ 237 (489)
|+.+..+++|+|+|+.|.|+|++... -.+++.+.+.||+|+.+|++|||.++||||||||+|||++++.++||+|||+
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccce
Confidence 99999999999999999999999876 6799999999999999999999999999999999999999999999999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
|..+..
T Consensus 170 a~~l~~-------------------------------------------------------------------------- 175 (411)
T KOG0599|consen 170 ACQLEP-------------------------------------------------------------------------- 175 (411)
T ss_pred eeccCC--------------------------------------------------------------------------
Confidence 855432
Q ss_pred cccccccCCccccCCCCccCcchhcC------CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCC
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISG------QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRI 391 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~ 391 (489)
..+...+||||+|+|||.+.. .+|+..+|+||+|||+|.||.|.+||......-++..|..+.+.|...
T Consensus 176 -----GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~sp 250 (411)
T KOG0599|consen 176 -----GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSP 250 (411)
T ss_pred -----chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCc
Confidence 223456799999999999964 357889999999999999999999999999888999999999888654
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCC
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKP 449 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~ 449 (489)
.+. +.....+|||.+||+.||.+|+++. ++|+||||..+-....+.+.|
T Consensus 251 eWa-----dis~~~KdLIsrlLqVdp~~Ritak----e~LaHpff~q~~~~~~r~msP 299 (411)
T KOG0599|consen 251 EWA-----DISATVKDLISRLLQVDPTKRITAK----EALAHPFFIQIAQQQARQMSP 299 (411)
T ss_pred chh-----hccccHHHHHHHHHeeCchhcccHH----HHhcChHHHHHHHhcccccCC
Confidence 333 2334689999999999999999998 999999998765554454443
No 66
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.3e-49 Score=402.92 Aligned_cols=281 Identities=36% Similarity=0.609 Sum_probs=232.6
Q ss_pred cCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccce
Q 011302 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (489)
Q Consensus 78 ~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 157 (489)
...+..++|++.+.||+|+||.||+|+++. +++.||+|++.+...........+..|+.+++.++||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~ 111 (370)
T cd05596 37 KLRMKAEDFDVIKVIGRGAFGEVQLVRHKS-----SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYA 111 (370)
T ss_pred cCCCCHHHcEEEEEEeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 345677899999999999999999999886 578899999987655544455567789999999999999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCC
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~ 237 (489)
+.+++.+|+||||++||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus 112 ~~~~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~ 188 (370)
T cd05596 112 FQDDKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT 188 (370)
T ss_pred EecCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccc
Confidence 9999999999999999999998865 3588999999999999999999999999999999999999999999999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
++......
T Consensus 189 ~~~~~~~~------------------------------------------------------------------------ 196 (370)
T cd05596 189 CMKMDANG------------------------------------------------------------------------ 196 (370)
T ss_pred eeeccCCC------------------------------------------------------------------------
Confidence 74321000
Q ss_pred cccccccCCccccCCCCccCcchhcCC----CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC--CCCCCC
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQ----GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP--LTFPRI 391 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~----~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~ 391 (489)
.......+||+.|+|||++.+. .++.++|||||||++|||++|..||.+.+....+.++.... +.+|..
T Consensus 197 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 271 (370)
T cd05596 197 -----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDD 271 (370)
T ss_pred -----cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCc
Confidence 0011234799999999999764 37889999999999999999999999988888888887643 333432
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCccc--ccCCCCChHHHHcCCCcCCCCccc--cccCCCCCCCC
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKK--RIGSLKGSVEIKRHEFFKGINWAL--IRSIKPPEVPN 454 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~--R~~~~~~~~~ll~hp~f~~~~~~~--~~~~~~p~~~~ 454 (489)
... +.++.+||.+||..+|.+ |+++. ++++||||++.+|.. ++...+|.+|.
T Consensus 272 ~~~-------s~~~~~li~~~L~~~p~r~~R~s~~----ell~h~~~~~~~~~~~~~~~~~~~~~p~ 327 (370)
T cd05596 272 IEI-------SKQAKDLICAFLTDREVRLGRNGVD----EIKSHPFFKNDQWTFDNIRETVAPVVPE 327 (370)
T ss_pred CCC-------CHHHHHHHHHHccChhhccCCCCHH----HHhcCcccCCCChhhHHhcCCCcCccCc
Confidence 111 235899999999999987 88876 999999999988874 45666666655
No 67
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.2e-49 Score=393.30 Aligned_cols=271 Identities=40% Similarity=0.760 Sum_probs=226.8
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||+||+|+++. +++.||||++.+...........+..|..++..+ +||||+++++++.+.+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKG-----TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence 469999999999999886 5778999999987655555566677888888887 6999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 76 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----- 148 (318)
T cd05570 76 EYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL----- 148 (318)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCc-----
Confidence 999999999888765 5799999999999999999999999999999999999999999999999998732100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
.......
T Consensus 149 -------------------------------------------------------------------------~~~~~~~ 155 (318)
T cd05570 149 -------------------------------------------------------------------------GGVTTST 155 (318)
T ss_pred -------------------------------------------------------------------------CCCcccc
Confidence 0001223
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.......+......+|... ...+.+|
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~~l 226 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWL---------SKEAKSI 226 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcC---------CHHHHHH
Confidence 4799999999999999999999999999999999999999999888888888877666555321 1248999
Q ss_pred HHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 409 ISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
|.+||+.||++|+++. ....+++.||||+.++|... ....||..+.
T Consensus 227 i~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (318)
T cd05570 227 LKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPK 275 (318)
T ss_pred HHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 9999999999999983 22359999999999999865 3455554444
No 68
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.7e-50 Score=397.83 Aligned_cols=270 Identities=40% Similarity=0.723 Sum_probs=226.2
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||.||+|+++. +++.||+|++.++.........++..|..+++.++||||+++++++...+.+|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKA-----TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEe
Confidence 469999999999999876 578999999998766555556677789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
|++||+|..++... ..+++..++.++.||+.||+|||+ +||+||||||+|||++.+|.+||+|||+++.....
T Consensus 76 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~---- 149 (325)
T cd05594 76 YANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD---- 149 (325)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC----
Confidence 99999999888765 579999999999999999999997 79999999999999999999999999997321100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
......
T Consensus 150 --------------------------------------------------------------------------~~~~~~ 155 (325)
T cd05594 150 --------------------------------------------------------------------------GATMKT 155 (325)
T ss_pred --------------------------------------------------------------------------Cccccc
Confidence 001123
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.......+......+|... ..++.+|
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~---------~~~~~~l 226 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL---------SPEAKSL 226 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCC---------CHHHHHH
Confidence 4699999999999999999999999999999999999999999888777777777666655432 1258999
Q ss_pred HHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCC
Q 011302 409 ISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVP 453 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~ 453 (489)
|.+||+.||++|++.. ..+.++++||||+++.|... ....||+.+
T Consensus 227 i~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~ 274 (325)
T cd05594 227 LSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKP 274 (325)
T ss_pred HHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCC
Confidence 9999999999998543 24569999999999999865 334455443
No 69
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.5e-49 Score=394.20 Aligned_cols=261 Identities=41% Similarity=0.697 Sum_probs=219.8
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHH-HHHHhCCCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK-VILTMLDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||+||+|+++. .++.||+|++.+...........+..|. .+++.++||||+++++++...+.+|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKA-----EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEE
Confidence 369999999999999886 5688999999876544333333444444 4567899999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|.+++... ..+.+..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 76 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~---- 149 (325)
T cd05602 76 DYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH---- 149 (325)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC----
Confidence 999999999988765 56889999999999999999999999999999999999999999999999997321100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
......
T Consensus 150 --------------------------------------------------------------------------~~~~~~ 155 (325)
T cd05602 150 --------------------------------------------------------------------------NGTTST 155 (325)
T ss_pred --------------------------------------------------------------------------CCCccc
Confidence 001234
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+......++... ...+.+|
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~~l 226 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNI---------TNSARHL 226 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCC---------CHHHHHH
Confidence 5799999999999999999999999999999999999999999888888888776655443211 1248999
Q ss_pred HHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc
Q 011302 409 ISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~ 444 (489)
|.+||+.||.+|+++.+.+.++++|+||..++|..+
T Consensus 227 i~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~ 262 (325)
T cd05602 227 LEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDL 262 (325)
T ss_pred HHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHH
Confidence 999999999999999888889999999999999876
No 70
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.1e-49 Score=393.10 Aligned_cols=268 Identities=38% Similarity=0.775 Sum_probs=222.6
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHh-CCCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM-LDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||+||+|+++. +++.||||++++..............|..++.. ++||||+++++++.+.+.+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKG-----TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEE
Confidence 469999999999999887 578899999988755444445556667777776 58999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|..++... ..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 76 ey~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 149 (316)
T cd05619 76 EYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG---- 149 (316)
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC----
Confidence 999999999988764 56899999999999999999999999999999999999999999999999997321100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
......
T Consensus 150 --------------------------------------------------------------------------~~~~~~ 155 (316)
T cd05619 150 --------------------------------------------------------------------------DAKTCT 155 (316)
T ss_pred --------------------------------------------------------------------------CCceee
Confidence 001123
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+......+|... ..++.+|
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~~l 226 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWL---------TREAKDI 226 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccC---------CHHHHHH
Confidence 4799999999999999999999999999999999999999999888777777765544444321 1248999
Q ss_pred HHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 409 ISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
|.+||+.||++|+++. +++++||||+.++|..+ +.+.+|..|.
T Consensus 227 i~~~l~~~P~~R~~~~---~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05619 227 LVKLFVREPERRLGVK---GDIRQHPFFREIDWSALEEREIEPPFKPK 271 (316)
T ss_pred HHHHhccCHhhcCCCh---HHHHcCcccCCCCHHHHHhCCCCCCcCCC
Confidence 9999999999999985 38999999999999876 3455665544
No 71
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.8e-49 Score=395.11 Aligned_cols=270 Identities=38% Similarity=0.676 Sum_probs=224.5
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHH-HHHhCCCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-ILTMLDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||+||+|+++. +++.||+|++.+...........+..|.. +++.++||||+++++++..++.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKL-----DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEE
Confidence 469999999999999876 57899999998765544444445555554 567799999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 76 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~----- 148 (325)
T cd05604 76 DFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA----- 148 (325)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCC-----
Confidence 999999999888764 5799999999999999999999999999999999999999999999999999732100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
.......
T Consensus 149 -------------------------------------------------------------------------~~~~~~~ 155 (325)
T cd05604 149 -------------------------------------------------------------------------QSDTTTT 155 (325)
T ss_pred -------------------------------------------------------------------------CCCCccc
Confidence 0001224
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+.......+.. . ...+.++
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~l 226 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPG---A------SLTAWSI 226 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCC---C------CHHHHHH
Confidence 579999999999999999999999999999999999999999988888888887765544321 1 1247899
Q ss_pred HHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccccc--CCCCCCC
Q 011302 409 ISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRS--IKPPEVP 453 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~--~~~p~~~ 453 (489)
|.+||+.||.+|+++.+.+.+++.||||++++|..+.. +.+|..|
T Consensus 227 l~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~ 273 (325)
T cd05604 227 LEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIPPPFNP 273 (325)
T ss_pred HHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCC
Confidence 99999999999999988889999999999999987643 3444443
No 72
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.9e-49 Score=393.95 Aligned_cols=281 Identities=33% Similarity=0.611 Sum_probs=227.9
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||+||+|+++. .++.||+|++.+...........+..|+.++..++|+||+++++++.+.+.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKN-----ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECC-----CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCE
Confidence 479999999999999999999887 567899999987655544555567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||++||+|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 999999999999999987642 5689999999999999999999999999999999999999999999999999732210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.. .
T Consensus 155 ~~-----------------------------------------------------------------------------~ 157 (332)
T cd05623 155 DG-----------------------------------------------------------------------------T 157 (332)
T ss_pred CC-----------------------------------------------------------------------------c
Confidence 00 0
Q ss_pred cCCccccCCCCccCcchhcC-----CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC--CCCCCCCCc
Q 011302 324 ARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT--FPRIGVSSS 396 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~ 396 (489)
......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+.+.++...... +|.....
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~-- 235 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTD-- 235 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCcccc--
Confidence 01123479999999999863 45789999999999999999999999998888888888765432 2322111
Q ss_pred hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 397 KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 397 ~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
...++++||++||..++ +|++. ..++++++||||.+++|..+....+|.+|..
T Consensus 236 ----~s~~~~~li~~ll~~~~-~r~~r-~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~ 288 (332)
T cd05623 236 ----VSEDAKDLIRRLICSRE-HRLGQ-NGIEDFKQHPFFTGIDWDNIRNCEAPYIPEV 288 (332)
T ss_pred ----CCHHHHHHHHHHccChh-hhcCC-CCHHHHhCCCCcCCCCHHHHhhCCCCccCCC
Confidence 12358999999997654 44332 1334999999999999999887777766654
No 73
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.4e-49 Score=392.48 Aligned_cols=270 Identities=40% Similarity=0.706 Sum_probs=225.0
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHH-HHHhCCCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-ILTMLDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||.||+|++.. .++.||+|++.+...........+..|.. +++.++||||+++++++.+.+..|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKS-----DGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECC-----CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEE
Confidence 369999999999999886 57899999998776544444445555554 678899999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 76 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~---- 149 (321)
T cd05603 76 DYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP---- 149 (321)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC----
Confidence 999999998888764 56899999999999999999999999999999999999999999999999997321000
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
......
T Consensus 150 --------------------------------------------------------------------------~~~~~~ 155 (321)
T cd05603 150 --------------------------------------------------------------------------EETTST 155 (321)
T ss_pred --------------------------------------------------------------------------CCcccc
Confidence 001123
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.......+......+|... ...+.++
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~~l 226 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGK---------TVAACDL 226 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCC---------CHHHHHH
Confidence 4799999999999998999999999999999999999999999888888888877766555321 1248899
Q ss_pred HHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccc--cCCCCCCC
Q 011302 409 ISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR--SIKPPEVP 453 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~--~~~~p~~~ 453 (489)
|.+||+.||.+|+++...+.++++|+||..++|..+. .+.+|..+
T Consensus 227 i~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (321)
T cd05603 227 LVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLYHKRITPPYNP 273 (321)
T ss_pred HHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHhcCCCCCCcCC
Confidence 9999999999999988788899999999999998763 34455433
No 74
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.2e-49 Score=395.13 Aligned_cols=271 Identities=37% Similarity=0.701 Sum_probs=219.9
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||+||+|+++. +++.||+|++.+...........+..|..++..+ +||||+++++++...+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKK-----TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEE
Confidence 469999999999999887 5788999999987655445556677788888776 7999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||+++|+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 76 E~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~----- 148 (329)
T cd05618 76 EYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR----- 148 (329)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC-----
Confidence 999999998888765 5799999999999999999999999999999999999999999999999999732100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
.......
T Consensus 149 -------------------------------------------------------------------------~~~~~~~ 155 (329)
T cd05618 149 -------------------------------------------------------------------------PGDTTST 155 (329)
T ss_pred -------------------------------------------------------------------------CCCcccc
Confidence 0001223
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCC---------CcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---------NNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~---------~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||... ........+......+|...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~------- 228 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL------- 228 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCC-------
Confidence 57999999999999999999999999999999999999999531 11223344555555555322
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC--CChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL--KGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~--~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
...+.+||.+||+.||++|+++. .++.++++||||+.++|..+ +...||..|.
T Consensus 229 --~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~~ 285 (329)
T cd05618 229 --SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPN 285 (329)
T ss_pred --CHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCccCC
Confidence 12488999999999999999964 34579999999999999866 3345555444
No 75
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.7e-49 Score=385.59 Aligned_cols=276 Identities=34% Similarity=0.564 Sum_probs=224.0
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
.|++.+.||+|+||+||+|.+.. +++.||+|++.............+.+|+.+++.++||||+++++++.+++.+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRA-----TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcC-----CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeE
Confidence 48899999999999999999876 5789999999876655444445567899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||++||+|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++....
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~- 154 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE- 154 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC-
Confidence 9999999999999887665445799999999999999999999999999999999999999999999999999743210
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 155 ------------------------------------------------------------------------------~~ 156 (285)
T cd05605 155 ------------------------------------------------------------------------------GE 156 (285)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHH----hcCCCCCCCCCCCCchhHH
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI----LKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i----~~~~~~~p~~~~~~~~~~~ 400 (489)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......+ ......++..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 227 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEK--------- 227 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcc---------
Confidence 012336899999999999988999999999999999999999999887654333222 2222222211
Q ss_pred HHhhHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCccccc--cCCCCCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR--SIKPPEVP 453 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~~--~~~~p~~~ 453 (489)
....+.+||.+||..||++|++.. ..++++++||||...+|..+. .+.||+.|
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05605 228 FSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCP 283 (285)
T ss_pred cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCC
Confidence 122488999999999999999643 234599999999999999773 34455544
No 76
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=8.1e-49 Score=391.42 Aligned_cols=280 Identities=35% Similarity=0.637 Sum_probs=226.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||+||+|+++. +++.||+|++.+...........+..|+.++..++|+||+++++++.++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKN-----TGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECC-----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCe
Confidence 479999999999999999999887 578899999987655555556667889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||++||+|.+++.+. ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..+..
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred EEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999999998763 35699999999999999999999999999999999999999999999999999733210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.. .
T Consensus 155 ~~-----------------------------------------------------------------------------~ 157 (331)
T cd05597 155 DG-----------------------------------------------------------------------------T 157 (331)
T ss_pred CC-----------------------------------------------------------------------------C
Confidence 00 0
Q ss_pred cCCccccCCCCccCcchhcC-----CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC--CCCCCCCCCc
Q 011302 324 ARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL--TFPRIGVSSS 396 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~ 396 (489)
......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+.+..+..... .++.....
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-- 235 (331)
T cd05597 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTD-- 235 (331)
T ss_pred ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCC--
Confidence 00112369999999999974 3478899999999999999999999998887777777765332 22222111
Q ss_pred hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCC
Q 011302 397 KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPN 454 (489)
Q Consensus 397 ~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~ 454 (489)
....+++||++||.. |.+|++. ..++++++||||++++|..+....+|.+|.
T Consensus 236 ----~~~~~~~li~~ll~~-~~~r~~r-~~~~~~l~hp~~~~~~~~~~~~~~~~~~~~ 287 (331)
T cd05597 236 ----VSEEAKDLIRRLICS-PETRLGR-NGLQDFKDHPFFEGIDWDNIRNSTAPYVPE 287 (331)
T ss_pred ----CCHHHHHHHHHHccC-cccccCC-CCHHHHhcCCCCCCCCHHHHhhCCCCccCc
Confidence 123589999999975 4444432 133499999999999999887777776654
No 77
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5.2e-49 Score=383.55 Aligned_cols=262 Identities=34% Similarity=0.580 Sum_probs=215.2
Q ss_pred eccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeec
Q 011302 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (489)
Q Consensus 92 lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 171 (489)
||+|+||+||+|.++. +++.||+|.+.+...........+..|+.+++.++||||+++++++..+..+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRA-----TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEcc-----CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCC
Confidence 7999999999999886 57899999998776655555667788999999999999999999999999999999999
Q ss_pred CCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 172 PGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 172 ~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
+||+|..++... ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+...
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~----- 150 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG----- 150 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCC-----
Confidence 999998776432 2356899999999999999999999999999999999999999999999999997432110
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
.......
T Consensus 151 -------------------------------------------------------------------------~~~~~~~ 157 (280)
T cd05608 151 -------------------------------------------------------------------------QSKTKGY 157 (280)
T ss_pred -------------------------------------------------------------------------Ccccccc
Confidence 0011234
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH----HHHHHHhcCCCCCCCCCCCCchhHHHHhhH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE----KTLINILKKPLTFPRIGVSSSKEFEEVVKL 405 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l 405 (489)
.||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+......++.. ....+
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 228 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDK---------FSPAS 228 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCccc---------CCHHH
Confidence 6899999999999999999999999999999999999999875432 2223333333222211 12358
Q ss_pred HHHHHHHhhcCcccccCCCC-ChHHHHcCCCcCCCCccccc
Q 011302 406 QDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALIR 445 (489)
Q Consensus 406 ~~li~~~L~~dP~~R~~~~~-~~~~ll~hp~f~~~~~~~~~ 445 (489)
.+|+.+||+.||++|++..+ .++++++||||++++|..+.
T Consensus 229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~ 269 (280)
T cd05608 229 KSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLE 269 (280)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHh
Confidence 99999999999999998764 56799999999999998763
No 78
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.8e-49 Score=391.84 Aligned_cols=271 Identities=38% Similarity=0.702 Sum_probs=222.3
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||+||+|+++. .++.||+|++.++..........+..|+.++..+ +||||+++++++.+.+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKK-----NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEE
Confidence 469999999999999887 5788999999987666556667788899998887 6999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|..++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 76 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~---- 149 (327)
T cd05617 76 EYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP---- 149 (327)
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC----
Confidence 999999999888765 57999999999999999999999999999999999999999999999999987321000
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
......
T Consensus 150 --------------------------------------------------------------------------~~~~~~ 155 (327)
T cd05617 150 --------------------------------------------------------------------------GDTTST 155 (327)
T ss_pred --------------------------------------------------------------------------CCceec
Confidence 011234
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC------c-HHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------N-EKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~------~-~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
.+||+.|+|||++.+..++.++|||||||++|||++|..||.... . ......+......+|....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-------- 227 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLS-------- 227 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCC--------
Confidence 579999999999999999999999999999999999999996421 1 2334445555545443211
Q ss_pred HhhHHHHHHHHhhcCcccccCCC--CChHHHHcCCCcCCCCccccc--cCCCCCCCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSL--KGSVEIKRHEFFKGINWALIR--SIKPPEVPN 454 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~--~~~~~ll~hp~f~~~~~~~~~--~~~~p~~~~ 454 (489)
..+.+||.+||+.||.+|+++. ..+++++.||||++++|..+. ...+|+.|.
T Consensus 228 -~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~ 283 (327)
T cd05617 228 -VKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQ 283 (327)
T ss_pred -HHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCC
Confidence 2488999999999999999974 356799999999999999773 344454444
No 79
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.7e-49 Score=396.15 Aligned_cols=270 Identities=39% Similarity=0.684 Sum_probs=224.0
Q ss_pred eccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC---CCCCcccccceeecCceEEEEE
Q 011302 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 92 lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
||+|+||+||+|+++. +++.||||++.+..............|..++..+ +||||+++++++.+...+|+||
T Consensus 1 lG~G~~g~Vy~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKD-----TRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECC-----CCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEE
Confidence 7999999999999886 5789999999876555444455555677776655 6999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 76 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~----- 148 (330)
T cd05586 76 DYMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLT----- 148 (330)
T ss_pred cCCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCC-----
Confidence 999999999888765 6799999999999999999999999999999999999999999999999999732110
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
.......
T Consensus 149 -------------------------------------------------------------------------~~~~~~~ 155 (330)
T cd05586 149 -------------------------------------------------------------------------DNKTTNT 155 (330)
T ss_pred -------------------------------------------------------------------------CCCCccC
Confidence 0011234
Q ss_pred ccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHH
Q 011302 329 FVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQD 407 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~ 407 (489)
.+||+.|+|||++.+. .++.++|||||||++|||++|..||.+.+..+.+..+..+...+|.... ...+.+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~ 227 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVL--------SDEGRQ 227 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccC--------CHHHHH
Confidence 5799999999999765 4799999999999999999999999998888888888777666654321 124889
Q ss_pred HHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 408 LISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 408 li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
||.+||+.||.+|+++...+.++++||||+.++|..+ ..+.+|..|.
T Consensus 228 li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~ 276 (330)
T cd05586 228 FVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPFKPI 276 (330)
T ss_pred HHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCccCC
Confidence 9999999999999998778889999999999999876 3344454443
No 80
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.5e-49 Score=392.65 Aligned_cols=281 Identities=34% Similarity=0.644 Sum_probs=230.3
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||+||+|+++. +++.||+|++.+...........+.+|..++..++|+||+++++++.+.+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKH-----TERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECC-----CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 579999999999999999999886 578899999987654444555667789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||++||+|.+++.... ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999999987642 5689999999999999999999999999999999999999999999999999743211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.. .
T Consensus 155 ~~-----------------------------------------------------------------------------~ 157 (331)
T cd05624 155 DG-----------------------------------------------------------------------------T 157 (331)
T ss_pred CC-----------------------------------------------------------------------------c
Confidence 00 0
Q ss_pred cCCccccCCCCccCcchhcC-----CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC--CCCCCCCCc
Q 011302 324 ARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT--FPRIGVSSS 396 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~ 396 (489)
......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+.+.++...... +|.....
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~-- 235 (331)
T cd05624 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITD-- 235 (331)
T ss_pred eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCcccc--
Confidence 01122469999999999976 45788999999999999999999999988887777777654322 2322111
Q ss_pred hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 397 KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 397 ~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
....+++||.+||..++ +|+.. ..++++++||||++++|..++...+|.+|..
T Consensus 236 ----~~~~~~~li~~ll~~~~-~~~~~-~~~~~~~~h~~f~~~~~~~~~~~~~~~~p~~ 288 (331)
T cd05624 236 ----VSEEAKDLIQRLICSRE-RRLGQ-NGIEDFKKHAFFEGIDWENIRNLEAPYIPDV 288 (331)
T ss_pred ----CCHHHHHHHHHHccCch-hhcCC-CCHHHHhcCCCcCCCCHHHHhhCCCCccCCC
Confidence 12358999999998654 55443 3556999999999999999988888887764
No 81
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.1e-49 Score=382.44 Aligned_cols=269 Identities=33% Similarity=0.542 Sum_probs=217.5
Q ss_pred eccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeec
Q 011302 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (489)
Q Consensus 92 lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 171 (489)
||+|+||.||+|+++. +++.||+|.+.............+..|+.+++.++||||+++++++.++.++|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~-----~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKN-----TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEcc-----CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecC
Confidence 7999999999999887 57899999998765543333445566999999999999999999999999999999999
Q ss_pred CCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCc
Q 011302 172 PGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPK 251 (489)
Q Consensus 172 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 251 (489)
+||+|.+++.......+++..+..++.||+.||+|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~------- 148 (277)
T cd05607 76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG------- 148 (277)
T ss_pred CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-------
Confidence 9999998887655556889999999999999999999999999999999999999999999999997332100
Q ss_pred chhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccC
Q 011302 252 LSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVG 331 (489)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 331 (489)
.......|
T Consensus 149 ------------------------------------------------------------------------~~~~~~~~ 156 (277)
T cd05607 149 ------------------------------------------------------------------------KTITQRAG 156 (277)
T ss_pred ------------------------------------------------------------------------ceeeccCC
Confidence 00112358
Q ss_pred CCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH----HHHHHHhcCCCCCCCCCCCCchhHHHHhhHHH
Q 011302 332 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE----KTLINILKKPLTFPRIGVSSSKEFEEVVKLQD 407 (489)
Q Consensus 332 t~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~ 407 (489)
|+.|+|||++.+..++.++|||||||++|||++|..||.+.... +....+......++... ...++.+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 228 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQN--------FTEESKD 228 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccccccc--------CCHHHHH
Confidence 99999999999988999999999999999999999999765432 23333333322221111 1225899
Q ss_pred HHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccc--cCCCCCC
Q 011302 408 LISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR--SIKPPEV 452 (489)
Q Consensus 408 li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~--~~~~p~~ 452 (489)
||.+||+.||++|+++.+.+++++.||||++++|..+. ...+|++
T Consensus 229 li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~ 275 (277)
T cd05607 229 ICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIPPPFV 275 (277)
T ss_pred HHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCCCCCC
Confidence 99999999999999998777899999999999998775 3444543
No 82
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8e-49 Score=390.16 Aligned_cols=265 Identities=38% Similarity=0.697 Sum_probs=222.0
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH-HHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEE
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-RKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLV 167 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 167 (489)
++.||+|+||.||+|+..... ..++.||+|++.+..... ......+..|+.+|+.++||||++++++|..++.+|+|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 78 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGA--DTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLI 78 (323)
T ss_pred CceeeecCCeEEEEEEEcccC--CCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEE
Confidence 367999999999999875321 257899999998765432 23345567899999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccc
Q 011302 168 MEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKL 247 (489)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 247 (489)
|||++||+|.+++.+. +.+.+..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 79 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 152 (323)
T cd05584 79 LEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIH---- 152 (323)
T ss_pred EeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeeccc----
Confidence 9999999999998765 5688999999999999999999999999999999999999999999999999732110
Q ss_pred cCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCc
Q 011302 248 LRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSK 327 (489)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (489)
......
T Consensus 153 --------------------------------------------------------------------------~~~~~~ 158 (323)
T cd05584 153 --------------------------------------------------------------------------EGTVTH 158 (323)
T ss_pred --------------------------------------------------------------------------CCCccc
Confidence 001122
Q ss_pred cccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHH
Q 011302 328 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQD 407 (489)
Q Consensus 328 ~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~ 407 (489)
..+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+....+..+..+...+|.... ..+.+
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 229 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLT---------PEARD 229 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCC---------HHHHH
Confidence 357999999999999988999999999999999999999999998888888888877665554321 24899
Q ss_pred HHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc
Q 011302 408 LISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 408 li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~ 444 (489)
||.+||+.||++|++.. ..+++++.||||+..+|..+
T Consensus 230 li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~ 267 (323)
T cd05584 230 LLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDL 267 (323)
T ss_pred HHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHH
Confidence 99999999999999643 23569999999999999866
No 83
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.9e-48 Score=388.90 Aligned_cols=280 Identities=41% Similarity=0.755 Sum_probs=222.2
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH-HHHHHHHHHHHHHHHhC-CCCCcccccceeecCc
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-RKKLHRADMEKVILTML-DHPFLPTLYAEFEASH 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 162 (489)
+|++++.||+|+||.||+|+..... .+++.||+|++.+..... ......+..|+.+++.+ +||||+++++++..++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGH--DTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC
Confidence 5899999999999999999875321 257899999998765432 23345677899999999 5999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.+|+||||++||+|.+++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.+.
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 999999999999999988765 569999999999999999999999999999999999999999999999999984321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
...
T Consensus 157 ~~~----------------------------------------------------------------------------- 159 (332)
T cd05614 157 SEE----------------------------------------------------------------------------- 159 (332)
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCc----HHHHHHHhcCCCCCCCCCCCCch
Q 011302 323 NARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----EKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
.......+||+.|+|||++.+.. ++.++|||||||++|||++|..||..... ......+......+|...
T Consensus 160 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 234 (332)
T cd05614 160 KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFI----- 234 (332)
T ss_pred CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCC-----
Confidence 01123457999999999998764 78999999999999999999999975432 233334444433333211
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
...+.+||.+||+.||++|+++. ..++++++||||++.+|..+ ....+|+.|.
T Consensus 235 ----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
T cd05614 235 ----GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPS 290 (332)
T ss_pred ----CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 12489999999999999999764 24569999999999999865 3445554443
No 84
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-49 Score=390.46 Aligned_cols=253 Identities=26% Similarity=0.426 Sum_probs=211.0
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++..+.+.||.|+||+||+|.+++. ..||||++......... ...+.+|+.+|.+++|||||+|+|++.+
T Consensus 38 i~~~~l~~~~~iG~G~~g~V~~~~~~g~------~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~ 110 (362)
T KOG0192|consen 38 IDPDELPIEEVLGSGSFGTVYKGKWRGT------DVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTS 110 (362)
T ss_pred cChHHhhhhhhcccCCceeEEEEEeCCc------eeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 4445666677799999999999999972 33899999876655444 6788899999999999999999999998
Q ss_pred Cc-eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCC-CeeecCCCCCeEeccCC-cEEEcccCC
Q 011302 161 SH-YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMG-IVYRDLKPENVLVREDG-HIMLSDFDL 237 (489)
Q Consensus 161 ~~-~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDIKp~NILl~~~~-~vkl~DFG~ 237 (489)
.. .++|||||+++|+|..++.......+++..+..|+.||+.||.|||+++ ||||||||+|||++.++ ++||+|||+
T Consensus 111 ~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 111 PPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred CCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcc
Confidence 87 7999999999999999998744478999999999999999999999999 99999999999999998 999999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
++......
T Consensus 191 sr~~~~~~------------------------------------------------------------------------ 198 (362)
T KOG0192|consen 191 SREKVISK------------------------------------------------------------------------ 198 (362)
T ss_pred ceeecccc------------------------------------------------------------------------
Confidence 85432100
Q ss_pred cccccccCCccccCCCCccCcchhc--CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCC
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVIS--GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSS 395 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~--~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~ 395 (489)
...+...||+.|||||++. ...|+.++||||||+++|||+||+.||.+....+....+..+....+.... .
T Consensus 199 ------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~-~ 271 (362)
T KOG0192|consen 199 ------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKE-C 271 (362)
T ss_pred ------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCcc-C
Confidence 0112247999999999999 568999999999999999999999999999987666666654443332221 2
Q ss_pred chhHHHHhhHHHHHHHHhhcCcccccCCCC
Q 011302 396 SKEFEEVVKLQDLISKLLVKNPKKRIGSLK 425 (489)
Q Consensus 396 ~~~~~~~~~l~~li~~~L~~dP~~R~~~~~ 425 (489)
. ..+..||.+||..||..||++.+
T Consensus 272 ~------~~l~~l~~~CW~~dp~~RP~f~e 295 (362)
T KOG0192|consen 272 P------PHLSSLMERCWLVDPSRRPSFLE 295 (362)
T ss_pred C------HHHHHHHHHhCCCCCCcCCCHHH
Confidence 2 24899999999999999999863
No 85
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.6e-49 Score=389.92 Aligned_cols=272 Identities=40% Similarity=0.738 Sum_probs=225.7
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||.||++++.... ..++.||+|++.+..... ....++..|+.+|+.++||||+++++++.+++.+|+|||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~--~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 78 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGP--DAGQLYAMKVLKKATLKV-RDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILD 78 (318)
T ss_pred ceeeeCCCEEEEEEEEeccC--CCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEc
Confidence 57999999999999875321 257899999998765432 233456779999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
|++||+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 79 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~----- 151 (318)
T cd05582 79 FLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH----- 151 (318)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-----
Confidence 99999999988765 56999999999999999999999999999999999999999999999999997422100
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
.......
T Consensus 152 -------------------------------------------------------------------------~~~~~~~ 158 (318)
T cd05582 152 -------------------------------------------------------------------------EKKAYSF 158 (318)
T ss_pred -------------------------------------------------------------------------CCceecc
Confidence 0112345
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLI 409 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li 409 (489)
+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....+......+|... ...+.+||
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~---------~~~~~~li 229 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFL---------SPEAQSLL 229 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCC---------CHHHHHHH
Confidence 799999999999998899999999999999999999999999888888888877665555321 12488999
Q ss_pred HHHhhcCcccccCCCC-ChHHHHcCCCcCCCCccccc--cCCCCCCC
Q 011302 410 SKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALIR--SIKPPEVP 453 (489)
Q Consensus 410 ~~~L~~dP~~R~~~~~-~~~~ll~hp~f~~~~~~~~~--~~~~p~~~ 453 (489)
++||+.||++|+++.+ .+.+++.||||+.++|..+. ...||..+
T Consensus 230 ~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (318)
T cd05582 230 RALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREIKPPFKP 276 (318)
T ss_pred HHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhcCCCCCcCC
Confidence 9999999999999864 36789999999999998763 34444443
No 86
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.2e-48 Score=383.63 Aligned_cols=311 Identities=56% Similarity=0.970 Sum_probs=246.5
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|.+.. +++.||+|.+.+...........+..|+.+++.++||||+++++.+.++..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKG-----TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcC-----CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCE
Confidence 479999999999999999999886 578899999987655544566778889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||+.|++|.+++....+..+++..+..++.|++.||+|||+.|++||||||+|||++.++.++|+|||++.....
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 99999999999999998876667899999999999999999999999999999999999999999999999999854321
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
....... ..... ....... .........+..
T Consensus 156 ~~~~~~~------------------------~~~~~--~~~~~~~-----------------------~~~~~~~~~~~~ 186 (316)
T cd05574 156 EPPPVSK------------------------ALRKG--SRRSSVN-----------------------SIPSETFSEEPS 186 (316)
T ss_pred ccccccc------------------------ccccc--ccccccc-----------------------ccchhhhccccc
Confidence 1000000 00000 0000000 000000011112
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.....+.||..|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.++......++.... ...
T Consensus 187 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 259 (316)
T cd05574 187 FRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPP-------VSS 259 (316)
T ss_pred CCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccc-------cCH
Confidence 2334568999999999999988999999999999999999999999998888888877766555543321 223
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
.+.+||.+||+.||++||+...++++++.||||++++|..++...||.+|..
T Consensus 260 ~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 311 (316)
T cd05574 260 SARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRP 311 (316)
T ss_pred HHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhcccCCCCCCCCc
Confidence 5899999999999999999766677999999999999999988888877653
No 87
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-49 Score=373.65 Aligned_cols=268 Identities=28% Similarity=0.366 Sum_probs=217.2
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec---
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA--- 160 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--- 160 (489)
..|..++.||+|+||.|+.|.++. +++.||||.+... ........+..+|+.+|+.++|+||+.+++++..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~-----t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKR-----TGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred ceecccccccCcceeeEEEEEEcC-----CCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 456668999999999999999998 5789999998743 2334566788899999999999999999998864
Q ss_pred --CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 161 --SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 161 --~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
-+.+|+|+|+| +.+|...++.+ ..|++..++.+++||+.||.|+|+.||+||||||.|+|++.+..+||||||+|
T Consensus 96 ~~f~DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 96 DKFNDVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred cccceeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccce
Confidence 45799999999 89999999875 45999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+.....
T Consensus 173 R~~~~~-------------------------------------------------------------------------- 178 (359)
T KOG0660|consen 173 RYLDKF-------------------------------------------------------------------------- 178 (359)
T ss_pred eecccc--------------------------------------------------------------------------
Confidence 543211
Q ss_pred ccccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC----------
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT---------- 387 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------- 387 (489)
......+.++-|.+|+|||++.. ..|+.++||||+|||+.||++|++.|.|.+..+++..|..--..
T Consensus 179 --~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~ 256 (359)
T KOG0660|consen 179 --FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR 256 (359)
T ss_pred --CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence 00112356688999999999864 56999999999999999999999999999877766665431100
Q ss_pred ----------CCCCC-CCCchhH-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 388 ----------FPRIG-VSSSKEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 388 ----------~p~~~-~~~~~~~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.|... .+....| ...+.+.||+.+||..||.+|+|++ |+|+||||..+.
T Consensus 257 s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~----eAL~hPYl~~~h 317 (359)
T KOG0660|consen 257 SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAE----EALAHPYLAPYH 317 (359)
T ss_pred cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHH----HHhcChhhhhhc
Confidence 11100 0001111 2234689999999999999999998 999999998864
No 88
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.9e-49 Score=373.19 Aligned_cols=269 Identities=28% Similarity=0.395 Sum_probs=218.3
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCC-cccccceeecC
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF-LPTLYAEFEAS 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~~~~~~~ 161 (489)
...|..+++||+|+||+||+|+.+. +++.||+|.++.+... +.......+|+.+|+.++|+| ||+|++++.+.
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~-----~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~ 83 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKR-----TGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTS 83 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEec-----CCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeec
Confidence 3567888899999999999999997 6789999999866432 223455678999999999999 99999999887
Q ss_pred c------eEEEEEeecCCCchHHHHHhCCC--CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEc
Q 011302 162 H------YSCLVMEYCPGGDLYAARQRQPG--KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 162 ~------~~~lV~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
+ .+|||+||+ .-+|..++...+. ..++...++.+++||+.||+|||+++|+||||||+||||+.+|.+||+
T Consensus 84 ~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKla 162 (323)
T KOG0594|consen 84 NNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLA 162 (323)
T ss_pred ccccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeee
Confidence 7 899999999 7899999987643 357778899999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||+|+.+....
T Consensus 163 DFGlAra~~ip~-------------------------------------------------------------------- 174 (323)
T KOG0594|consen 163 DFGLARAFSIPM-------------------------------------------------------------------- 174 (323)
T ss_pred ccchHHHhcCCc--------------------------------------------------------------------
Confidence 999995332100
Q ss_pred CccccccccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc---C--CCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---K--PLT 387 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~--~~~ 387 (489)
.....-++|.+|+|||++.|. .|+..+||||+|||++||+++++.|.|..+.+++..|.+ . ...
T Consensus 175 ----------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 175 ----------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred ----------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 112344789999999999997 589999999999999999999999999999888877754 1 111
Q ss_pred CCCCC-----------CCCchhH-----HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 388 FPRIG-----------VSSSKEF-----EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 388 ~p~~~-----------~~~~~~~-----~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
||... ......+ .......+|+.+||+.+|.+|.++. .++.||||....
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~----~al~h~yf~~~~ 309 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAK----GALTHPYFSELP 309 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHH----HHhcChhhcccc
Confidence 22111 0000111 1113578999999999999999998 999999998874
No 89
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.1e-49 Score=397.03 Aligned_cols=261 Identities=28% Similarity=0.462 Sum_probs=218.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CC-----Ccccccce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HP-----FLPTLYAE 157 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp-----nIv~l~~~ 157 (489)
.+|.+++.||+|+||.|.+|.++. +++.||||+++... ....+...|+.+|..|+ |. |||+++++
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~-----T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~ 256 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHK-----TGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDY 256 (586)
T ss_pred EEEEEEEEecccccceeEEEEecC-----CCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeec
Confidence 367899999999999999999998 68999999998764 45567777999999997 43 79999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC--CcEEEccc
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED--GHIMLSDF 235 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~--~~vkl~DF 235 (489)
|...+++|||+|++ +-+|+++++.+....|+...++.|+.||+.||.+||+.||||+|||||||||..- ..|||+||
T Consensus 257 F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDF 335 (586)
T KOG0667|consen 257 FYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDF 335 (586)
T ss_pred cccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEec
Confidence 99999999999999 8999999999888889999999999999999999999999999999999999753 47999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|.|....
T Consensus 336 GSSc~~~------------------------------------------------------------------------- 342 (586)
T KOG0667|consen 336 GSSCFES------------------------------------------------------------------------- 342 (586)
T ss_pred ccccccC-------------------------------------------------------------------------
Confidence 9873211
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC---------
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL--------- 386 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--------- 386 (489)
....+++-+..|+|||+|.|.+|+.+.||||||||++||++|.+.|.|.++.++++.|..-.-
T Consensus 343 --------q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 343 --------QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred --------CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 122366788999999999999999999999999999999999999999999999888853100
Q ss_pred ------------CCCC--------------------------CCCC-CchhH------HHHhhHHHHHHHHhhcCccccc
Q 011302 387 ------------TFPR--------------------------IGVS-SSKEF------EEVVKLQDLISKLLVKNPKKRI 421 (489)
Q Consensus 387 ------------~~p~--------------------------~~~~-~~~~~------~~~~~l~~li~~~L~~dP~~R~ 421 (489)
.++. ...+ ....+ .....+.|||.+||++||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 0000 0000 00000 1122468999999999999999
Q ss_pred CCCCChHHHHcCCCcCCC
Q 011302 422 GSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 422 ~~~~~~~~ll~hp~f~~~ 439 (489)
+.. ++|+||||.+.
T Consensus 495 tp~----qal~Hpfl~~~ 508 (586)
T KOG0667|consen 495 TPA----QALNHPFLTGT 508 (586)
T ss_pred CHH----HHhcCcccccc
Confidence 998 99999999854
No 90
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-50 Score=389.02 Aligned_cols=258 Identities=28% Similarity=0.448 Sum_probs=221.0
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
..|..++.||+|+||.||+|.+.. +++.||||++..+... .....++.|+.+|..++++||.++|+.|..+..
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~-----t~k~vAiKii~Le~~~--deIediqqei~~Ls~~~~~~it~yygsyl~g~~ 85 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNK-----TKKVVAIKIIDLEEAE--DEIEDIQQEISVLSQCDSPNITEYYGSYLKGTK 85 (467)
T ss_pred cccccchhccccccceeeeeeecc-----ccceEEEEEechhhcc--hhhHHHHHHHHHHHhcCcchHHhhhhheeeccc
Confidence 568888999999999999999987 6889999999877544 445677789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
++++||||.||++.++++.. ..+.+.++..++++++.||.|||.++.||||||+.|||+..+|.|||+|||.+-.+..
T Consensus 86 LwiiMey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred HHHHHHHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec
Confidence 99999999999999998764 4568999999999999999999999999999999999999999999999999732211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
..
T Consensus 164 ------------------------------------------------------------------------------~~ 165 (467)
T KOG0201|consen 164 ------------------------------------------------------------------------------TV 165 (467)
T ss_pred ------------------------------------------------------------------------------hh
Confidence 01
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.+..+++|||.|||||++.+..|+.++||||||++.|||++|.+||....+..++..|-+.. .|........
T Consensus 166 ~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~--PP~L~~~~S~------ 237 (467)
T KOG0201|consen 166 KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSA--PPRLDGDFSP------ 237 (467)
T ss_pred hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCC--CCccccccCH------
Confidence 23478899999999999999999999999999999999999999999888865555444432 2222222222
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.+++||..||++||+.||++. +||+|+|.+...
T Consensus 238 ~~kEFV~~CL~k~P~~RpsA~----~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 238 PFKEFVEACLDKNPEFRPSAK----ELLKHKFIKRAK 270 (467)
T ss_pred HHHHHHHHHhhcCcccCcCHH----HHhhhHHHHhcC
Confidence 489999999999999999998 999999998743
No 91
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5.6e-48 Score=377.28 Aligned_cols=277 Identities=36% Similarity=0.597 Sum_probs=221.9
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
.|++.+.||+|+||.||+|.++. +++.||+|.+.+...........+..|+.+++.++|+||+++++.+.+++..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRA-----TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcC-----CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEE
Confidence 37888999999999999999987 5789999999866544334445567799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||++||+|.+++.......+++.++..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++.....
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~- 154 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE- 154 (285)
T ss_pred EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC-
Confidence 9999999999999988765545699999999999999999999999999999999999999999999999998732110
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 155 ------------------------------------------------------------------------------~~ 156 (285)
T cd05630 155 ------------------------------------------------------------------------------GQ 156 (285)
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH---HHHHHHhcC-CCCCCCCCCCCchhHH
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE---KTLINILKK-PLTFPRIGVSSSKEFE 400 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~~~i~~~-~~~~p~~~~~~~~~~~ 400 (489)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.... .....+... ...++..
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 227 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEK--------- 227 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCcc---------
Confidence 011236899999999999989999999999999999999999999875432 222222211 1111110
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCC-ChHHHHcCCCcCCCCcccccc--CCCCCCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALIRS--IKPPEVPN 454 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~-~~~~ll~hp~f~~~~~~~~~~--~~~p~~~~ 454 (489)
....+.+||.+||+.||++|++... .++++++||||+.++|..+.. ..||+.|.
T Consensus 228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05630 228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKPD 284 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCCCCCCC
Confidence 1124899999999999999999431 245999999999999987644 56666554
No 92
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-49 Score=382.52 Aligned_cols=262 Identities=31% Similarity=0.464 Sum_probs=231.8
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
+-|.+.+.||+|.|+.|-+|++.- ++..||||++.+..+..-.. ..+..|+++|+..+|||||+||++......
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVF-----TGekVAVKviDKTKlD~~st-~hlfqEVRCMKLVQHpNiVRLYEViDTQTK 91 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVF-----TGEKVAVKVIDKTKLDTLST-GHLFQEVRCMKLVQHPNIVRLYEVIDTQTK 91 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhc-----ccceeEEEEecccccchhhh-hHHHHHHHHHHHhcCcCeeeeeehhcccce
Confidence 568899999999999999999886 68999999999887764433 345569999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEec-cCCcEEEcccCCCcccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVR-EDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~-~~~~vkl~DFG~a~~~~ 242 (489)
+|||+|+=++|+|++++.++. ..+.++.++.|++||+.|+.|+|...+|||||||+|+++- .-|-|||.|||++-.+.
T Consensus 92 lyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 999999999999999998874 5699999999999999999999999999999999999886 45899999999984332
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
+
T Consensus 171 P------------------------------------------------------------------------------- 171 (864)
T KOG4717|consen 171 P------------------------------------------------------------------------------- 171 (864)
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred ccCCccccCCCCccCcchhcCCCC-CCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
.....+.||+..|-|||++.|..| .+++||||||||||-|++|++||...+..+.+..|+.+.+..|.-..
T Consensus 172 G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS-------- 243 (864)
T KOG4717|consen 172 GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVS-------- 243 (864)
T ss_pred cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhh--------
Confidence 123456799999999999999998 57899999999999999999999999999999999999998886432
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~ 444 (489)
.+++|||..||.+||.+|.+.+ +|..|+|++.+|....
T Consensus 244 -~eCrdLI~sMLvRdPkkRAslE----eI~s~~Wlq~~D~~~s 281 (864)
T KOG4717|consen 244 -KECRDLIQSMLVRDPKKRASLE----EIVSTSWLQAGDRGLS 281 (864)
T ss_pred -HHHHHHHHHHHhcCchhhccHH----HHhccccccCCCCCcc
Confidence 2589999999999999999886 9999999999986543
No 93
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.1e-47 Score=373.21 Aligned_cols=281 Identities=35% Similarity=0.573 Sum_probs=226.6
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
.|+..+.||+|+||+||+|.+.. +++.||+|.+.............+.+|+.+|+.++|+||+++++++..++..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRA-----TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECC-----CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEE
Confidence 37888999999999999999886 5788999999876555444445567799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~- 154 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE- 154 (285)
T ss_pred EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCC-
Confidence 9999999999999888765445799999999999999999999999999999999999999999999999998732210
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 155 ------------------------------------------------------------------------------~~ 156 (285)
T cd05632 155 ------------------------------------------------------------------------------GE 156 (285)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
......|++.|+|||++.+..++.++|||||||++|||++|..||.+.........+.............. ....
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 231 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAK-----FSEE 231 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCcc-----CCHH
Confidence 01223689999999999998899999999999999999999999988766544333322111111000000 1124
Q ss_pred HHHHHHHHhhcCcccccCCCCC-hHHHHcCCCcCCCCcccc--ccCCCCCCCC
Q 011302 405 LQDLISKLLVKNPKKRIGSLKG-SVEIKRHEFFKGINWALI--RSIKPPEVPN 454 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~-~~~ll~hp~f~~~~~~~~--~~~~~p~~~~ 454 (489)
+.+|+.+||+.||++|+++.+. +.+++.|+||+.++|..+ ..+.||++|.
T Consensus 232 ~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05632 232 AKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVPD 284 (285)
T ss_pred HHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCCC
Confidence 7899999999999999997543 679999999999999865 5566777664
No 94
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.3e-48 Score=378.66 Aligned_cols=263 Identities=29% Similarity=0.390 Sum_probs=207.6
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
+++|++.+.||+|+||.||+|+++. ++..||+|+++..... .....+.+|+.+++.++||||+++++++.+++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 76 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKL-----TENLVALKEIRLEHEE--GAPCTAIREVSLLKNLKHANIVTLHDIIHTER 76 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECC-----CCCEEEEEEecccccC--CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 4789999999999999999999886 5788999998754211 22334567999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||++ |+|.+++... +..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 77 ~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~ 154 (288)
T cd07871 77 CLTLVFEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKS 154 (288)
T ss_pred eEEEEEeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence 9999999996 5898887654 2458899999999999999999999999999999999999999999999999973221
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 155 ~~------------------------------------------------------------------------------ 156 (288)
T cd07871 155 VP------------------------------------------------------------------------------ 156 (288)
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC--------------
Q 011302 323 NARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT-------------- 387 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-------------- 387 (489)
........||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+..+.+..+......
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 001122368999999999876 45899999999999999999999999988876665554321100
Q ss_pred -----CCCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 388 -----FPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 388 -----~p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+|......... .....+++|||.+||++||.+|+++. ++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~----~~l~hp~f 288 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAE----AALRHSYF 288 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHH----HHhcCCCC
Confidence 11000000000 01123588999999999999999997 99999998
No 95
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.1e-47 Score=375.14 Aligned_cols=264 Identities=27% Similarity=0.367 Sum_probs=208.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||+||+|+++. +++.||+|++...... ......+.+|+.+++.++||||+++++++..++.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 74 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKE-----TKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGK 74 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECC-----CCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCE
Confidence 479999999999999999999986 5788999999754322 2234556779999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||++++.|..+.... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 75 LYLVFEYVEKNMLELLEEMP--NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred EEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 99999999887776554332 5689999999999999999999999999999999999999999999999999843211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.. .
T Consensus 153 ~~-----------------------------------------------------------------------------~ 155 (287)
T cd07848 153 GS-----------------------------------------------------------------------------N 155 (287)
T ss_pred cc-----------------------------------------------------------------------------c
Confidence 00 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC------------------
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP------------------ 385 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------------------ 385 (489)
.......||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+....+....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 01123468999999999999889999999999999999999999999877655444332210
Q ss_pred -CCCCCCCCCCchh----HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 386 -LTFPRIGVSSSKE----FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 386 -~~~p~~~~~~~~~----~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..+|......... ...+..+.+||.+||+.||++||++. ++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~----~~l~hp~f 287 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTE----QCLNHPAF 287 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHH----HHhcCCCC
Confidence 0111110000000 01223589999999999999999997 99999998
No 96
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-49 Score=373.66 Aligned_cols=259 Identities=32% Similarity=0.496 Sum_probs=209.4
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC---
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--- 161 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--- 161 (489)
.|...+++|.|+||.||.|.... +.+.||||.+-.+.. .-.+|..+|+.++|||||+|..+|...
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e-----~~~~vAIKKv~~d~r-------~knrEl~im~~l~HpNIV~L~~~f~~~~~~ 92 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRE-----TEEEVAIKKVLQDKR-------YKNRELQIMRKLDHPNIVRLLYFFSSSTES 92 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcC-----CCceeEEEEecCCCC-------cCcHHHHHHHhcCCcCeeeEEEEEEecCCC
Confidence 58889999999999999999998 478899999865431 223499999999999999999988522
Q ss_pred --ceEEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC-CcEEEcccC
Q 011302 162 --HYSCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED-GHIMLSDFD 236 (489)
Q Consensus 162 --~~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~-~~vkl~DFG 236 (489)
-++.|||||+ ..+|++.++.. .+.+++.-.++.|.+||++||.|||+.||+||||||.|+|+|.+ |.+||||||
T Consensus 93 d~~~lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFG 171 (364)
T KOG0658|consen 93 DEVYLNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFG 171 (364)
T ss_pred chhHHHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCC
Confidence 2567899999 57998888742 23678999999999999999999999999999999999999965 999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
.|+.+..
T Consensus 172 SAK~L~~------------------------------------------------------------------------- 178 (364)
T KOG0658|consen 172 SAKVLVK------------------------------------------------------------------------- 178 (364)
T ss_pred cceeecc-------------------------------------------------------------------------
Confidence 9965432
Q ss_pred ccccccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC-----------
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK----------- 384 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~----------- 384 (489)
+....++..|..|+|||.+.|.. |+.+.||||.||++.||+-|++.|.|.+..+++..|.+-
T Consensus 179 ------~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 179 ------GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred ------CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 11234567899999999999865 899999999999999999999999999988887777541
Q ss_pred ------CCCCCCCCCCCc---hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 385 ------PLTFPRIGVSSS---KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 385 ------~~~~p~~~~~~~---~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
...+|......- ......+++.+|+.++|..+|++|.++. +++.||||..+
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~----~~l~h~fFdel 312 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSAL----EALAHPFFDEL 312 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHH----HHhcchhhHHh
Confidence 112222211110 0112335689999999999999999998 99999999765
No 97
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.7e-48 Score=380.02 Aligned_cols=268 Identities=28% Similarity=0.415 Sum_probs=207.4
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++.+.||+|+||.||+|+++. +++.||||++...... .....+.+|+.+++.++||||+++++++.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 76 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKV-----NGKLVALKVIRLQEEE--GTPFTAIREASLLKGLKHANIVLLHDIIHTKE 76 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECC-----CCCEEEEEEecccccc--ccchhHHHHHHHHhhCCCCCcCeEEEEEecCC
Confidence 3789999999999999999999876 5788999998754221 12234567999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 77 ~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 77 TLTLVFEYV-HTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred eEEEEEECC-CcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 999999999 578887776543 568999999999999999999999999999999999999999999999999973211
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 155 ~~------------------------------------------------------------------------------ 156 (303)
T cd07869 155 VP------------------------------------------------------------------------------ 156 (303)
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcH-HHHHHHhc---CCC--CCCC-----
Q 011302 323 NARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNE-KTLINILK---KPL--TFPR----- 390 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~---~~~--~~p~----- 390 (489)
.......+||+.|+|||++.+. .++.++|||||||++|||++|..||.+.... +.+..+.. .+. .++.
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 0011223689999999998764 4789999999999999999999999876543 22222211 100 0000
Q ss_pred -C-----CCCCchh----H---HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCc
Q 011302 391 -I-----GVSSSKE----F---EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 441 (489)
Q Consensus 391 -~-----~~~~~~~----~---~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~ 441 (489)
. ....... + .....+.+||.+||+.||.+|+++. ++++||||+.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~----~~l~h~~f~~~~~ 296 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQ----AALSHEYFSDLPP 296 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHH----HHhcCcccccCCh
Confidence 0 0000000 0 0123578999999999999999997 9999999998864
No 98
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-47 Score=387.13 Aligned_cols=263 Identities=23% Similarity=0.381 Sum_probs=207.0
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
.+...+|.+++.||+|+||.||+|.+.. +++.||||.... ..+.+|+.+|+.++||||++++++|.
T Consensus 88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~~-----~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~ 153 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEGFAFACIDNK-----TCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFT 153 (391)
T ss_pred ccccCCcEEEEEEcCCCCeEEEEEEECC-----CCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEE
Confidence 3556789999999999999999999987 578899997542 23456999999999999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
.+...|+|||++ +++|..++... ..+++.+++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+
T Consensus 154 ~~~~~~lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 154 YNKFTCLILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred ECCeeEEEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence 999999999999 57898887665 568999999999999999999999999999999999999999999999999983
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.....
T Consensus 231 ~~~~~--------------------------------------------------------------------------- 235 (391)
T PHA03212 231 FPVDI--------------------------------------------------------------------------- 235 (391)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 21100
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC-------cHHHHHHHhcCC----CCC
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN-------NEKTLINILKKP----LTF 388 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-------~~~~~~~i~~~~----~~~ 388 (489)
........+||+.|+|||++.+..++.++|||||||++|||++|..||...+ ....+..+.... ..+
T Consensus 236 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~ 313 (391)
T PHA03212 236 --NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF 313 (391)
T ss_pred --cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence 0011234579999999999999999999999999999999999998875432 112222222110 011
Q ss_pred CC----------------------CCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 389 PR----------------------IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 389 p~----------------------~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
+. ........+..+.++.+||.+||++||++||++. ++|+||||+.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~----elL~hp~f~~~~ 383 (391)
T PHA03212 314 PIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAE----ALLDFAAFQDIP 383 (391)
T ss_pred CcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHH----HHhcChhhccCC
Confidence 10 0000001112234689999999999999999998 999999998753
No 99
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=9.9e-47 Score=369.28 Aligned_cols=265 Identities=42% Similarity=0.771 Sum_probs=228.8
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|.+.. .++.||+|++.+...........+.+|+.++++++||||+++++++.+++.
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKG-----SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcC-----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCe
Confidence 479999999999999999999886 568899999987766555566778889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||.|||++.++.+||+|||++.....
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred EEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999999998776 5799999999999999999999999999999999999999999999999999732210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
T Consensus 154 -------------------------------------------------------------------------------- 153 (290)
T cd05580 154 -------------------------------------------------------------------------------- 153 (290)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.....+|++.|+|||.+.+..++.++|||||||++|+|++|..||...+.......+..+...+|... ..
T Consensus 154 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 223 (290)
T cd05580 154 -RTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFF---------SP 223 (290)
T ss_pred -CCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccC---------CH
Confidence 01234689999999999888889999999999999999999999988887777777776655554322 12
Q ss_pred hHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCccccc
Q 011302 404 KLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIR 445 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~~ 445 (489)
.++++|.+||..||.+|++.. ..++++++||||+.++|..+.
T Consensus 224 ~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~ 266 (290)
T cd05580 224 DAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALL 266 (290)
T ss_pred HHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHh
Confidence 589999999999999999543 456799999999999998763
No 100
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.5e-47 Score=396.94 Aligned_cols=261 Identities=24% Similarity=0.345 Sum_probs=201.4
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC------CCCccccc
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD------HPFLPTLY 155 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~l~ 155 (489)
..++|+++++||+|+||+||+|.+.. .++.||||+++.... .......|+.+++.+. |.+|++++
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~-----~~~~vAvK~i~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~ 197 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRK-----RKEYCAVKIVRNVPK----YTRDAKIEIQFMEKVRQADPADRFPLMKIQ 197 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcC-----CCeEEEEEEEecchh----hHHHHHHHHHHHHHHhhcCcccCcceeeeE
Confidence 45789999999999999999999876 578899999964321 1222334666665554 45688999
Q ss_pred ceeecC-ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCC-----
Q 011302 156 AEFEAS-HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDG----- 228 (489)
Q Consensus 156 ~~~~~~-~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~----- 228 (489)
++|..+ .++|+|||++ |++|.+++.+. +.+++..++.|+.||+.||+|||+ .|||||||||+|||++.++
T Consensus 198 ~~~~~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 198 RYFQNETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred EEEEcCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccc
Confidence 988754 5899999999 88998888765 579999999999999999999998 5999999999999998765
Q ss_pred -----------cEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccc
Q 011302 229 -----------HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 297 (489)
Q Consensus 229 -----------~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (489)
.+||+|||++....
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~------------------------------------------------------- 299 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDER------------------------------------------------------- 299 (467)
T ss_pred ccccccCCCCceEEECCCCccccCc-------------------------------------------------------
Confidence 49999999862110
Q ss_pred cccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHH
Q 011302 298 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT 377 (489)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~ 377 (489)
......+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.
T Consensus 300 --------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~ 353 (467)
T PTZ00284 300 --------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH 353 (467)
T ss_pred --------------------------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 012345799999999999999999999999999999999999999998877665
Q ss_pred HHHHhcCCCCCCCCC---------------------CCCch------------hHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 378 LINILKKPLTFPRIG---------------------VSSSK------------EFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 378 ~~~i~~~~~~~p~~~---------------------~~~~~------------~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..+......+|... ..... .......+.|||.+||++||++|+++.
T Consensus 354 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~ 433 (467)
T PTZ00284 354 LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNAR 433 (467)
T ss_pred HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHH
Confidence 554432111111000 00000 001123578999999999999999998
Q ss_pred CChHHHHcCCCcCCC
Q 011302 425 KGSVEIKRHEFFKGI 439 (489)
Q Consensus 425 ~~~~~ll~hp~f~~~ 439 (489)
|+|+||||...
T Consensus 434 ----e~L~Hp~~~~~ 444 (467)
T PTZ00284 434 ----QMTTHPYVLKY 444 (467)
T ss_pred ----HHhcCcccccc
Confidence 99999999864
No 101
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.1e-47 Score=377.05 Aligned_cols=267 Identities=26% Similarity=0.353 Sum_probs=213.1
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|++++.||+|+||.||+|++.. ++..||+|++..+.. .....++.+|+.+|+.++||||+++++++.+
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 74 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKP-----SGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYS 74 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECC-----CCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence 445899999999999999999999886 578899999975421 2334567789999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhC-CCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMM-GIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
++.+|+||||++||+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 152 (331)
T cd06649 75 DGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG 152 (331)
T ss_pred CCEEEEEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccc
Confidence 99999999999999999998765 5689999999999999999999986 69999999999999999999999999973
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
....
T Consensus 153 ~~~~---------------------------------------------------------------------------- 156 (331)
T cd06649 153 QLID---------------------------------------------------------------------------- 156 (331)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 2210
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC-----CCCCC--
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT-----FPRIG-- 392 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-----~p~~~-- 392 (489)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+....+ ..... .+...
T Consensus 157 ----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 231 (331)
T cd06649 157 ----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF-GRPVVDGEEGEPHSISP 231 (331)
T ss_pred ----cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh-cccccccccCCccccCc
Confidence 0112346899999999999999999999999999999999999999876654433222 11100 00000
Q ss_pred ---------------------------------CCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 393 ---------------------------------VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 393 ---------------------------------~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
.+.........++++||.+||.+||++||++. +|++||||+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~----ell~h~~~~~~ 307 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLK----MLMNHTFIKRS 307 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHH----HHhcChHHhhc
Confidence 00000001123589999999999999999998 99999999765
Q ss_pred Cc
Q 011302 440 NW 441 (489)
Q Consensus 440 ~~ 441 (489)
..
T Consensus 308 ~~ 309 (331)
T cd06649 308 EV 309 (331)
T ss_pred cc
Confidence 43
No 102
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-48 Score=381.98 Aligned_cols=260 Identities=30% Similarity=0.495 Sum_probs=227.8
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|..++++|+|+||.+++++++. ..+.|++|.+..+....+. .+.+..|+.+++++.|||||.+.+.|..++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~-----~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~ 76 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKS-----DDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDG 76 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhcc-----CCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCC
Confidence 4789999999999999999999887 5678999999876655333 236777999999999999999999999888
Q ss_pred e-EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 163 Y-SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 163 ~-~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
. +||||+||+||+|.+.+.+..+..|+++.+..|+.|++.||.|||+++|+|||||+.||+++.++.|||+|||+|+.+
T Consensus 77 ~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 77 QLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred ceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhc
Confidence 8 999999999999999999887888999999999999999999999999999999999999999999999999999654
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
...
T Consensus 157 ~~~----------------------------------------------------------------------------- 159 (426)
T KOG0589|consen 157 NPE----------------------------------------------------------------------------- 159 (426)
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 321
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
.....+.+|||.||+||++.+.+|+.|+|||||||++|||++-+++|.+.+....+.+|....+. |.....+
T Consensus 160 -~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~-Plp~~ys------ 231 (426)
T KOG0589|consen 160 -DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS-PLPSMYS------ 231 (426)
T ss_pred -hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC-CCCcccc------
Confidence 11345679999999999999999999999999999999999999999999999999999887632 2222222
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
.+++.||..||..+|+.||++. +||.+|....
T Consensus 232 -~el~~lv~~~l~~~P~~RPsa~----~LL~~P~l~~ 263 (426)
T KOG0589|consen 232 -SELRSLVKSMLRKNPEHRPSAL----ELLRRPHLLR 263 (426)
T ss_pred -HHHHHHHHHHhhcCCccCCCHH----HHhhChhhhh
Confidence 2489999999999999999998 9999988763
No 103
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.8e-47 Score=377.55 Aligned_cols=271 Identities=24% Similarity=0.301 Sum_probs=207.1
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC---
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--- 161 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--- 161 (489)
+|++.+.||+|+||.||+|++.. +++.||||++...... .....++.+|+.+++.++||||+++++++...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTH-----TGEKVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECC-----CCCEEEEEEechhhcc-chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC
Confidence 58999999999999999999886 5788999998753222 22334677899999999999999999987533
Q ss_pred --ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 162 --HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 162 --~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
..+|+||||| +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 75 ~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 75 EFKDIYVVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred CCceEEEEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 3589999999 57998888765 569999999999999999999999999999999999999999999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.......
T Consensus 152 ~~~~~~~------------------------------------------------------------------------- 158 (338)
T cd07859 152 VAFNDTP------------------------------------------------------------------------- 158 (338)
T ss_pred ccccccC-------------------------------------------------------------------------
Confidence 3210000
Q ss_pred cccccCCccccCCCCccCcchhcC--CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCC--------
Q 011302 320 EPINARSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP-------- 389 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p-------- 389 (489)
........+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+....+..+.......+
T Consensus 159 --~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 159 --TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred --ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 0001123579999999999876 5689999999999999999999999988765443322211000000
Q ss_pred -------------CCCCCCchhH-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccc
Q 011302 390 -------------RIGVSSSKEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWAL 443 (489)
Q Consensus 390 -------------~~~~~~~~~~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~ 443 (489)
.........+ .....+.+||.+||+.||++||++. ++++||||+++....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~----e~l~hp~f~~~~~~~ 300 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAE----EALADPYFKGLAKVE 300 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHH----HHhcCchhhhcCccc
Confidence 0000000000 1123578999999999999999987 999999999877643
No 104
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6.9e-47 Score=390.92 Aligned_cols=267 Identities=25% Similarity=0.399 Sum_probs=206.5
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
.....+|++++.||+|+||.||+|.+.. +++.||||.+..... ...+|+.+|+.++|||||+++++|.
T Consensus 62 ~~~~~~y~~~~~LG~G~fg~Vy~~~~~~-----~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~h~niv~l~~~~~ 129 (440)
T PTZ00036 62 RSPNKSYKLGNIIGNGSFGVVYEAICID-----TSEKVAIKKVLQDPQ-------YKNRELLIMKNLNHINIIFLKDYYY 129 (440)
T ss_pred cCcCCeEEEeEEEEeCCCEEEEEEEECC-----CCCEEEEEEEecCcc-------hHHHHHHHHHhcCCCCCcceeeeEe
Confidence 3455789999999999999999999876 567899998864321 2235999999999999999988764
Q ss_pred c--------CceEEEEEeecCCCchHHHHHh--CCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC-
Q 011302 160 A--------SHYSCLVMEYCPGGDLYAARQR--QPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG- 228 (489)
Q Consensus 160 ~--------~~~~~lV~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~- 228 (489)
. ...+|+||||++ ++|.+++.. .....+++..++.|+.||+.||+|||++|||||||||+||||+.++
T Consensus 130 ~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~ 208 (440)
T PTZ00036 130 TECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTH 208 (440)
T ss_pred ecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCC
Confidence 2 235789999996 577766643 2346799999999999999999999999999999999999999665
Q ss_pred cEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCC
Q 011302 229 HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHD 308 (489)
Q Consensus 229 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (489)
.+||+|||+|+.+..
T Consensus 209 ~vkL~DFGla~~~~~----------------------------------------------------------------- 223 (440)
T PTZ00036 209 TLKLCDFGSAKNLLA----------------------------------------------------------------- 223 (440)
T ss_pred ceeeeccccchhccC-----------------------------------------------------------------
Confidence 699999999843211
Q ss_pred ccccCCccccccccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC---
Q 011302 309 QELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK--- 384 (489)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--- 384 (489)
.......+||+.|+|||++.+. .++.++|||||||++|||++|.+||.+.+..+.+.++...
T Consensus 224 --------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~ 289 (440)
T PTZ00036 224 --------------GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGT 289 (440)
T ss_pred --------------CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 0011234789999999998765 5899999999999999999999999998877666655431
Q ss_pred --------------CCCCCCCCCCCch-hH--HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcc
Q 011302 385 --------------PLTFPRIGVSSSK-EF--EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 442 (489)
Q Consensus 385 --------------~~~~p~~~~~~~~-~~--~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~ 442 (489)
...+|........ .+ ..+.++++||.+||.+||.+|+++. ++++||||+.+...
T Consensus 290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~----e~l~hp~f~~~~~~ 360 (440)
T PTZ00036 290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPI----EALADPFFDDLRDP 360 (440)
T ss_pred CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHH----HHhCChhHHhhhcc
Confidence 1112211100000 00 1224689999999999999999997 99999999887553
No 105
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.5e-47 Score=370.28 Aligned_cols=264 Identities=27% Similarity=0.352 Sum_probs=205.0
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC---CCCCcccccceee-
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFE- 159 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~- 159 (489)
++|++++.||+|+||+||+|++... .+..||+|+++...... .....+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~ 75 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKN----GGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 75 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCC----CCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEec
Confidence 3799999999999999999998642 35789999987532211 1122334566666655 6999999999875
Q ss_pred ----cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 160 ----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 160 ----~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
....+|+||||++ ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus 76 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 76 SRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred ccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 3457899999995 79999887765567899999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+++.....
T Consensus 155 g~~~~~~~~----------------------------------------------------------------------- 163 (290)
T cd07862 155 GLARIYSFQ----------------------------------------------------------------------- 163 (290)
T ss_pred cceEeccCC-----------------------------------------------------------------------
Confidence 997432100
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC-----CCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL-----TFPR 390 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----~~p~ 390 (489)
.......||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+.++..... .++.
T Consensus 164 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (290)
T cd07862 164 --------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 235 (290)
T ss_pred --------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchh
Confidence 011234689999999999998899999999999999999999999999888777777654211 1110
Q ss_pred CC-----------CCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 391 IG-----------VSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 391 ~~-----------~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.. ...... ...+..+++||.+||+.||++||++. ++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~----~~l~hp~f 290 (290)
T cd07862 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY----SALSHPYF 290 (290)
T ss_pred hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHH----HHhcCCCC
Confidence 00 000000 01223578999999999999999997 99999998
No 106
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.8e-46 Score=375.57 Aligned_cols=255 Identities=27% Similarity=0.374 Sum_probs=200.1
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|+.++.||+|+||.||+|++.. +++.||||++..... ......+.+|+.+++.++|+||+++++++..+
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 144 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRP-----TGRLYALKVIYGNHE--DTVRRQICREIEILRDVNHPNVVKCHDMFDHN 144 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECC-----CCCEEEEEEEecCCc--HHHHHHHHHHHHHHHhCCCCCcceeeeEeccC
Confidence 45678889999999999999999876 567899999864321 12345677899999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
+.+|+||||+++|+|... ..+.+..+..++.||+.||+|||++|||||||||+|||++.++.+||+|||+++.+
T Consensus 145 ~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~ 218 (353)
T PLN00034 145 GEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRIL 218 (353)
T ss_pred CeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceec
Confidence 999999999999998542 23567788899999999999999999999999999999999999999999998432
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
...
T Consensus 219 ~~~----------------------------------------------------------------------------- 221 (353)
T PLN00034 219 AQT----------------------------------------------------------------------------- 221 (353)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 110
Q ss_pred cccCCccccCCCCccCcchhcC-----CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHH---HHHHHhcCCCCCCCCCC
Q 011302 322 INARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK---TLINILKKPLTFPRIGV 393 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~---~~~~i~~~~~~~p~~~~ 393 (489)
.......+||..|+|||++.. ...+.++|||||||++|||++|+.||......+ ....+..... +....
T Consensus 222 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~ 298 (353)
T PLN00034 222 -MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP--PEAPA 298 (353)
T ss_pred -cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC--CCCCC
Confidence 001123469999999999853 224568999999999999999999997443222 2222221111 11111
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
. ...++++||.+||+.||++||++. ++++||||.+-
T Consensus 299 ~------~~~~l~~li~~~l~~~P~~Rpt~~----ell~hp~~~~~ 334 (353)
T PLN00034 299 T------ASREFRHFISCCLQREPAKRWSAM----QLLQHPFILRA 334 (353)
T ss_pred c------cCHHHHHHHHHHccCChhhCcCHH----HHhcCcccccC
Confidence 1 122589999999999999999987 99999999874
No 107
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.6e-45 Score=363.35 Aligned_cols=290 Identities=37% Similarity=0.681 Sum_probs=231.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||.||+|.++. .++.||+|.+.............+..|+.+++.++||||+++++.+..+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~-----~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKE-----TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECC-----CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCE
Confidence 479999999999999999999886 578899999987765545556677889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||++|++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred EEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999999999998765 5689999999999999999999999999999999999999999999999998742110
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.... .. . .+ ........
T Consensus 154 ~~~~-----------------------~~------~----~~------------------------------~~~~~~~~ 170 (305)
T cd05609 154 SLTT-----------------------NL------Y----EG------------------------------HIEKDTRE 170 (305)
T ss_pred Cccc-----------------------cc------c----cc------------------------------ccccchhh
Confidence 0000 00 0 00 00000000
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.......|+..|+|||.+.+..++.++|||||||++|||++|..||.+.+..+....+.......|....... .
T Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 244 (305)
T cd05609 171 FLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALP------A 244 (305)
T ss_pred ccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCC------H
Confidence 0112346889999999999888999999999999999999999999988877777777666555544322212 2
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPP 450 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p 450 (489)
.+.+||.+||+.||++||+.. .+.++++||||...+|..+......
T Consensus 245 ~~~~li~~~l~~~P~~R~~~~-~~~~ll~~~~~~~~~~~~~~~~~~~ 290 (305)
T cd05609 245 DAQDLISRLLRQNPLERLGTG-GAFEVKQHRFFLGLDWNGLLRQKAE 290 (305)
T ss_pred HHHHHHHHHhccChhhccCcc-CHHHHHhCccccCCCHHHHhhcCCC
Confidence 489999999999999999973 4459999999999999876544333
No 108
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-46 Score=382.66 Aligned_cols=269 Identities=25% Similarity=0.383 Sum_probs=212.0
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
..+|.+++.||+|+||.||+|...+. ..++.||+|.+.... ...+|+.+|+.++||||+++++++....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~---~~~~~v~vK~~~~~~--------~~~~E~~il~~l~h~~iv~~~~~~~~~~ 159 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGD---EQRKKVIVKAVTGGK--------TPGREIDILKTISHRAIINLIHAYRWKS 159 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCC---ccceeEEEEeccccc--------cHHHHHHHHHhcCCCCccceeeeEeeCC
Confidence 46899999999999999999987642 246788999886532 2345999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+|||++ +++|.+++... ..+++.+++.|+.||+.||.|||++|||||||||+|||++.++.+||+|||++..+.
T Consensus 160 ~~~lv~e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 160 TVCMVMPKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred EEEEEehhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 999999999 57888888544 679999999999999999999999999999999999999999999999999984322
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
... .
T Consensus 237 ~~~----------------------------------------------------------------------------~ 240 (392)
T PHA03207 237 AHP----------------------------------------------------------------------------D 240 (392)
T ss_pred ccc----------------------------------------------------------------------------c
Confidence 100 0
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCc---HHHHHHHhc----CCCCCCCCCCC-
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN---EKTLINILK----KPLTFPRIGVS- 394 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---~~~~~~i~~----~~~~~p~~~~~- 394 (489)
.......+||+.|+|||++.+..++.++|||||||++|||++|..||.+... ...+..+.. .+..++.....
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence 0112345799999999999999999999999999999999999999987543 222222222 11112211000
Q ss_pred -----------------Cch---hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccc
Q 011302 395 -----------------SSK---EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR 445 (489)
Q Consensus 395 -----------------~~~---~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~ 445 (489)
... ......++.+||.+||..||++||++. +++.||||+..+|+.++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~----e~l~~p~f~~~~~~~~~ 387 (392)
T PHA03207 321 LCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQ----DILSLPLFTKEPINLLN 387 (392)
T ss_pred HHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHH----HHhhCchhhccchhhhc
Confidence 000 001123578999999999999999998 99999999999988765
No 109
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-47 Score=376.60 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=212.4
Q ss_pred hhcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccc
Q 011302 76 RAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLY 155 (489)
Q Consensus 76 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 155 (489)
...|++..+.+++++.||+|.||+||+|.+++. ..||+|.++...+.. +.+.+|+.+|++|+|+|||+|+
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~------~~vavk~ik~~~m~~----~~f~~Ea~iMk~L~H~~lV~l~ 267 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGS------TKVAVKTIKEGSMSP----EAFLREAQIMKKLRHEKLVKLY 267 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCC------CcccceEEeccccCh----hHHHHHHHHHHhCcccCeEEEE
Confidence 345566777888999999999999999999973 457999998754432 3455799999999999999999
Q ss_pred ceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 156 AEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 156 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
+++..++.+|||||||+.|+|.++|+...+..+...+.+.|+.|||+||+||+++++|||||.++||||+++..+||+||
T Consensus 268 gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDF 347 (468)
T KOG0197|consen 268 GVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDF 347 (468)
T ss_pred EEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccc
Confidence 99999899999999999999999999866788999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+|+..... .|.
T Consensus 348 GLAr~~~d~--------------~Y~------------------------------------------------------ 359 (468)
T KOG0197|consen 348 GLARLIGDD--------------EYT------------------------------------------------------ 359 (468)
T ss_pred ccccccCCC--------------cee------------------------------------------------------
Confidence 999622110 000
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 394 (489)
...+.--...|.|||++....++.++|||||||+||||+| |+.||.+.++.+++..+.++..-.....++
T Consensus 360 ---------~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP 430 (468)
T KOG0197|consen 360 ---------ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCP 430 (468)
T ss_pred ---------ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCC
Confidence 0000012347999999999999999999999999999997 999999999999998887764332222222
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..+.+||..||+.+|++|||+.
T Consensus 431 --------~~vY~lM~~CW~~~P~~RPtF~ 452 (468)
T KOG0197|consen 431 --------DEVYELMKSCWHEDPEDRPTFE 452 (468)
T ss_pred --------HHHHHHHHHHhhCCcccCCCHH
Confidence 2488999999999999999985
No 110
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-47 Score=350.46 Aligned_cols=257 Identities=28% Similarity=0.425 Sum_probs=216.9
Q ss_pred ccCCceee-eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceee
Q 011302 82 GLDHFRLL-RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE 159 (489)
Q Consensus 82 ~~~~y~~~-~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~ 159 (489)
.+++|++. ++||-|-.|.|..|.++. +++.+|+|++.... .+.+|+++.-+. .|||||.++++|+
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~-----T~ekfALKvL~Ds~--------KARrEVeLHw~~s~h~~iV~IidVye 125 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKR-----TQEKFALKVLLDSP--------KARREVELHWMASGHPHIVSIIDVYE 125 (400)
T ss_pred chhhheehhhhhccccCCceEEEEecc-----chhhhHHHHHhcCH--------HHHhHhhhhhhhcCCCceEEeehhhh
Confidence 35788776 478999999999999987 68889999985332 233477765444 6999999999886
Q ss_pred ----cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc---CCcEEE
Q 011302 160 ----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE---DGHIML 232 (489)
Q Consensus 160 ----~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~---~~~vkl 232 (489)
...++.+|||.|+||+|+..++.+....|++.++..|+.||+.|+.|||+.+|.||||||||+|... |-.+||
T Consensus 126 Ns~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 126 NSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred hhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEe
Confidence 3467899999999999999999988888999999999999999999999999999999999999974 457999
Q ss_pred cccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCcccc
Q 011302 233 SDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELL 312 (489)
Q Consensus 233 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (489)
+|||+|+.-..
T Consensus 206 tDfGFAK~t~~--------------------------------------------------------------------- 216 (400)
T KOG0604|consen 206 TDFGFAKETQE--------------------------------------------------------------------- 216 (400)
T ss_pred cccccccccCC---------------------------------------------------------------------
Confidence 99999953211
Q ss_pred CCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC----cHHHHHHHhcCCCCC
Q 011302 313 DDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN----NEKTLINILKKPLTF 388 (489)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~----~~~~~~~i~~~~~~~ 388 (489)
+....+.|-||+|.|||++..++|+..+|+||+||++|-||+|.+||+... ...+-.+|..+.+.|
T Consensus 217 ----------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~F 286 (400)
T KOG0604|consen 217 ----------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEF 286 (400)
T ss_pred ----------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccC
Confidence 112234588999999999999999999999999999999999999998654 345677899999999
Q ss_pred CCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 389 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 389 p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
|...+.+.+ ..++|+|++||.-+|++|+++. +++.|||..+.
T Consensus 287 P~pEWs~VS-----e~aKdlIR~LLkt~PteRlTI~----~~m~hpwi~~~ 328 (400)
T KOG0604|consen 287 PEPEWSCVS-----EAAKDLIRKLLKTEPTERLTIE----EVMDHPWINQY 328 (400)
T ss_pred CChhHhHHH-----HHHHHHHHHHhcCCchhheeHH----HhhcCchhccc
Confidence 976655444 3689999999999999999998 99999999764
No 111
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.2e-46 Score=373.75 Aligned_cols=261 Identities=21% Similarity=0.270 Sum_probs=202.0
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 157 (489)
|++..++|++.+.||+|+||.||+|.+........+..||+|++...... .....+..|+.+|..+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATA--SEHKALMSELKILIHIGNHLNVVNLLGA 79 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccch--HHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence 56777899999999999999999998754333335678999998753221 2345677899999999 89999999998
Q ss_pred eecC-ceEEEEEeecCCCchHHHHHhCC----------------------------------------------------
Q 011302 158 FEAS-HYSCLVMEYCPGGDLYAARQRQP---------------------------------------------------- 184 (489)
Q Consensus 158 ~~~~-~~~~lV~E~~~gg~L~~~l~~~~---------------------------------------------------- 184 (489)
+... ..+|+||||++||+|.+++....
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 8754 46899999999999999886531
Q ss_pred --------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHH
Q 011302 185 --------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEA 256 (489)
Q Consensus 185 --------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~ 256 (489)
...+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....+.
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~---------- 229 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD---------- 229 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc----------
Confidence 12477888899999999999999999999999999999999999999999999843211000
Q ss_pred HhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCCCcc
Q 011302 257 IEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYL 336 (489)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 336 (489)
........+++.|+
T Consensus 230 ------------------------------------------------------------------~~~~~~~~~~~~y~ 243 (338)
T cd05102 230 ------------------------------------------------------------------YVRKGSARLPLKWM 243 (338)
T ss_pred ------------------------------------------------------------------hhcccCCCCCcccc
Confidence 00112234678899
Q ss_pred CcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhc
Q 011302 337 APEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVK 415 (489)
Q Consensus 337 aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~ 415 (489)
|||++.+..++.++|||||||++|||++ |..||.+....+.+............ ... ....+.+||.+||..
T Consensus 244 aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~l~~li~~cl~~ 316 (338)
T cd05102 244 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRA-PEN------ATPEIYRIMLACWQG 316 (338)
T ss_pred CcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCC-CCC------CCHHHHHHHHHHccC
Confidence 9999999999999999999999999997 99999886654444333332211111 111 112589999999999
Q ss_pred CcccccCCC
Q 011302 416 NPKKRIGSL 424 (489)
Q Consensus 416 dP~~R~~~~ 424 (489)
||++||++.
T Consensus 317 dp~~RPs~~ 325 (338)
T cd05102 317 DPKERPTFS 325 (338)
T ss_pred ChhhCcCHH
Confidence 999999987
No 112
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-47 Score=380.78 Aligned_cols=262 Identities=29% Similarity=0.487 Sum_probs=219.0
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
+.|.|+..||.|+||+||+|..+. ++.+.|-|++.... ...+..++.|++||..++||+||+|++.|..++.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nke-----t~~lAAaKvIetks---eEELEDylVEIeILa~CdHP~ivkLl~ayy~enk 103 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKE-----TKLLAAAKVIETKS---EEELEDYLVEIEILAECDHPVIVKLLSAYYFENK 103 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhccc-----chhhhhhhhhcccc---hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCc
Confidence 557888999999999999999887 45667888885432 3456778889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
++|+.|||.||-+..++-.- +..|.+.++..+++|++.||.|||+++|||||||..|||++-+|.++|+|||.+....
T Consensus 104 LwiliEFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~- 181 (1187)
T KOG0579|consen 104 LWILIEFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK- 181 (1187)
T ss_pred eEEEEeecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch-
Confidence 99999999999887665443 4789999999999999999999999999999999999999999999999999862110
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
...
T Consensus 182 -----------------------------------------------------------------------------~t~ 184 (1187)
T KOG0579|consen 182 -----------------------------------------------------------------------------STR 184 (1187)
T ss_pred -----------------------------------------------------------------------------hHH
Confidence 001
Q ss_pred cCCccccCCCCccCcchhc-----CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 324 ARSKSFVGTHEYLAPEVIS-----GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
.+..+|+|||+|||||++. ..+|++++||||||++|.||..+.+|....+...++.+|.+... |....++ .
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSeP--PTLlqPS--~ 260 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP--PTLLQPS--H 260 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCC--CcccCcc--h
Confidence 2346789999999999975 46799999999999999999999999999999999988876422 2222221 1
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcc
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 442 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~ 442 (489)
|. ..+.||+.+||.+||..||++. +|++||||.+++-+
T Consensus 261 Ws--~~F~DfLk~cL~Knp~~Rp~aa----qll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 261 WS--RSFSDFLKRCLVKNPRNRPPAA----QLLKHPFVQNAPSN 298 (1187)
T ss_pred hh--hHHHHHHHHHHhcCCccCCCHH----HHhhCcccccCCcc
Confidence 11 1378999999999999999998 99999999977643
No 113
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.2e-46 Score=375.44 Aligned_cols=262 Identities=28% Similarity=0.412 Sum_probs=203.6
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++.+.||+|+||.||+|.+.. +++.||+|++...... .....++.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 93 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTV-----LGINVAVKKLSRPFQN-QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK 93 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcC-----CCceeEEEEecccccc-hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence 4789999999999999999999876 5788999999754321 233455667999999999999999999986443
Q ss_pred ------eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 163 ------YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 163 ------~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
.+|+||||++ ++|.+.+.. .+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||
T Consensus 94 ~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 94 SLEEFQDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred CccccceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCC
Confidence 5799999995 567666543 48899999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+++....
T Consensus 169 ~a~~~~~------------------------------------------------------------------------- 175 (359)
T cd07876 169 LARTACT------------------------------------------------------------------------- 175 (359)
T ss_pred Ccccccc-------------------------------------------------------------------------
Confidence 9732110
Q ss_pred ccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC------------
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK------------ 384 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~------------ 384 (489)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+...
T Consensus 176 ------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 176 ------NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred ------CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 00112346899999999999999999999999999999999999999887755443332211
Q ss_pred ----------CCCCCCC---------CCCCch--hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 385 ----------PLTFPRI---------GVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 385 ----------~~~~p~~---------~~~~~~--~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
...++.. ...... .......+++||.+||..||++||++. ++++||||..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~----e~l~hp~~~~ 320 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVD----EALRHPYITV 320 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHH----HHhcCchhhh
Confidence 0011000 000000 000123588999999999999999987 9999999975
No 114
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=9.8e-46 Score=374.11 Aligned_cols=262 Identities=27% Similarity=0.385 Sum_probs=205.7
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC-
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~- 161 (489)
.++|++.+.||+|+||.||+|.+.. .++.||||++...... ......+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~ 96 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAI-----LERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECC-----CCcEEEEEEeCccccC-chhHHHHHHHHHHHHhcCCCCccccceeecccc
Confidence 4789999999999999999999876 5678999999754321 22334566799999999999999999987543
Q ss_pred -----ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 162 -----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 162 -----~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
..+|+||||++ ++|.+.+.. .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 97 SLEEFQDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cccccCeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCC
Confidence 35799999995 577776653 48889999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+++....
T Consensus 172 ~a~~~~~------------------------------------------------------------------------- 178 (364)
T cd07875 172 LARTAGT------------------------------------------------------------------------- 178 (364)
T ss_pred CccccCC-------------------------------------------------------------------------
Confidence 9842210
Q ss_pred ccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCC--------
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF-------- 388 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-------- 388 (489)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+.++.......
T Consensus 179 ------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 179 ------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred ------CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 001123468999999999999999999999999999999999999999888766665554311000
Q ss_pred -----------CCCC------------CCC--chhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 389 -----------PRIG------------VSS--SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 389 -----------p~~~------------~~~--~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
|... ... .........+++||.+||+.||.+||++. ++|+||||..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~----e~L~hp~~~~ 323 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD----EALQHPYINV 323 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHH----HHhcCccccc
Confidence 0000 000 00000123578999999999999999997 9999999974
No 115
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.1e-45 Score=357.39 Aligned_cols=260 Identities=37% Similarity=0.596 Sum_probs=213.6
Q ss_pred eccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeec
Q 011302 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (489)
Q Consensus 92 lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 171 (489)
||+|+||+||+|.++. +++.||+|++.+...........+..|+.+|+.++||||+++++++...+..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKA-----TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcC-----CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecC
Confidence 6999999999999876 57889999998765544444556678999999999999999999999999999999999
Q ss_pred CCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCc
Q 011302 172 PGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPK 251 (489)
Q Consensus 172 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 251 (489)
+|++|.+++.......+++.++..++.|++.||.|||++|++||||||+|||++.++.+||+|||++.....
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~-------- 147 (277)
T cd05577 76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-------- 147 (277)
T ss_pred CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc--------
Confidence 999999988776545799999999999999999999999999999999999999999999999998732210
Q ss_pred chhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccC
Q 011302 252 LSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVG 331 (489)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 331 (489)
........|
T Consensus 148 -----------------------------------------------------------------------~~~~~~~~~ 156 (277)
T cd05577 148 -----------------------------------------------------------------------GKKIKGRAG 156 (277)
T ss_pred -----------------------------------------------------------------------CCccccccC
Confidence 000112357
Q ss_pred CCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHH----hcCCCCCCCCCCCCchhHHHHhhHHH
Q 011302 332 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI----LKKPLTFPRIGVSSSKEFEEVVKLQD 407 (489)
Q Consensus 332 t~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i----~~~~~~~p~~~~~~~~~~~~~~~l~~ 407 (489)
+..|+|||++.+..++.++|||||||++|+|++|+.||...........+ .......+.. ....+.+
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 227 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDK---------FSPEAKD 227 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCcc---------CCHHHHH
Confidence 88999999999888999999999999999999999999876542222222 2222222211 1235899
Q ss_pred HHHHHhhcCcccccCCCC-ChHHHHcCCCcCCCCcccc
Q 011302 408 LISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 408 li~~~L~~dP~~R~~~~~-~~~~ll~hp~f~~~~~~~~ 444 (489)
||.+||+.||++|++..+ .+.+++.||||+.++|..+
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~ 265 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRL 265 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhh
Confidence 999999999999998887 7789999999999999766
No 116
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=5.6e-46 Score=376.99 Aligned_cols=267 Identities=24% Similarity=0.295 Sum_probs=208.5
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc--
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH-- 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-- 162 (489)
+|++++.||+|+||.||+|.+.. +++.||||.+...... .....++.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPR-----DGKRVALKKMPNVFQN-LVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECC-----CCCEEEEEeccccccc-hHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcc
Confidence 57889999999999999999876 5788999998643211 123456778999999999999999999998776
Q ss_pred ---eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 163 ---YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 163 ---~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
.+|+||||+. ++|.+.+... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 75 ~~~~~~lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 75 PFEEIYVVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred ccceEEEEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEecccccee
Confidence 8999999994 6888877654 579999999999999999999999999999999999999999999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
......
T Consensus 152 ~~~~~~-------------------------------------------------------------------------- 157 (372)
T cd07853 152 VEEPDE-------------------------------------------------------------------------- 157 (372)
T ss_pred ecccCc--------------------------------------------------------------------------
Confidence 321100
Q ss_pred cccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc---------------
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK--------------- 383 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~--------------- 383 (489)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+..+.+..+..
T Consensus 158 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 158 ---SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred ---cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 00112236899999999998754 78999999999999999999999998877665554432
Q ss_pred --------CCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCc
Q 011302 384 --------KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 441 (489)
Q Consensus 384 --------~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~ 441 (489)
.....+..............++.+||.+||+.||++||++. ++++||||++..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~----e~l~hp~~~~~~~ 296 (372)
T cd07853 235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAA----DALAHPYLDEGRL 296 (372)
T ss_pred HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHH----HHhcCHhhCCCcc
Confidence 11111110000000001123588999999999999999997 9999999988643
No 117
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.9e-46 Score=369.78 Aligned_cols=266 Identities=25% Similarity=0.344 Sum_probs=209.6
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|++.+.||+|+||.||+|.+.. ++..+|+|++..+.. ......+.+|+.+++.++||||++++++|.+
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 74 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKP-----SGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYS 74 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECC-----CCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCcccceeEEEEE
Confidence 345899999999999999999999886 567899999875421 1234557789999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhC-CCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMM-GIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
++.+|+||||++||+|.+++... +.+++..+..++.|++.||.|||++ +|+||||||+|||++.+|.+||+|||++.
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~ 152 (333)
T cd06650 75 DGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 152 (333)
T ss_pred CCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcch
Confidence 99999999999999999998765 5688999999999999999999985 79999999999999999999999999973
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.+..
T Consensus 153 ~~~~---------------------------------------------------------------------------- 156 (333)
T cd06650 153 QLID---------------------------------------------------------------------------- 156 (333)
T ss_pred hhhh----------------------------------------------------------------------------
Confidence 2210
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc---CCCCC--------
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---KPLTF-------- 388 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~~~-------- 388 (489)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.. +....
T Consensus 157 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (333)
T cd06650 157 ----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPR 232 (333)
T ss_pred ----hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccC
Confidence 001234689999999999998899999999999999999999999986654333211100 00000
Q ss_pred ----------CCCCC----------------CCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 389 ----------PRIGV----------------SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 389 ----------p~~~~----------------~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
|.... +.........++++||.+||++||++||++. +++.||||+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~----ell~h~~~~~~ 305 (333)
T cd06650 233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLK----QLMVHAFIKRS 305 (333)
T ss_pred CccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHH----HHhhCHHHhcC
Confidence 00000 0000000123588999999999999999987 99999999764
No 118
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.3e-46 Score=366.12 Aligned_cols=267 Identities=27% Similarity=0.401 Sum_probs=208.4
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|.+++.||+|+||.||+|+++. ++..||+|.++..... .....+.+|+.+++.++||||+++++++..++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKL-----TENLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIVHTDK 77 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecC-----CCCeEEEEEeeccccC--CcchhHHHHHHHHHhCCCCCcceEEEEEeeCC
Confidence 4789999999999999999999876 5678999998754321 12234567999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||++ ++|.+++... +..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 155 (309)
T cd07872 78 SLTLVFEYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKS 155 (309)
T ss_pred eEEEEEeCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecC
Confidence 9999999996 5888877654 2458899999999999999999999999999999999999999999999999973221
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 156 ~~------------------------------------------------------------------------------ 157 (309)
T cd07872 156 VP------------------------------------------------------------------------------ 157 (309)
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC---C-------------
Q 011302 323 NARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK---P------------- 385 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~---~------------- 385 (489)
........||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+..+.+..+... +
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 0001123578999999998764 5799999999999999999999999988766554444321 0
Q ss_pred ---CCCCCCCCCC--chhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 386 ---LTFPRIGVSS--SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 386 ---~~~p~~~~~~--~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
..++...... ......+.++++||.+||..||.+|+++. ++++||||+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~----e~l~h~~~~~~~ 293 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAE----EAMKHAYFRSLG 293 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHH----HHhcChhhhhcc
Confidence 0011100000 00001123588999999999999999987 999999998763
No 119
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=6.4e-45 Score=393.41 Aligned_cols=152 Identities=36% Similarity=0.616 Sum_probs=138.3
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
+++|.++++||+|+||+||+|.+.. .++.||||++.............+..|+.++..++||||+++++++....
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKN-----NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECC-----CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC
Confidence 4789999999999999999999886 57899999998765544455667888999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
++||||||+.|++|.+++... +.+++..++.|+.||+.||+|||.+|||||||||+||||+.++.+||+|||+++..
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccc
Confidence 999999999999999998765 56899999999999999999999999999999999999999999999999999754
No 120
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-45 Score=361.06 Aligned_cols=262 Identities=28% Similarity=0.367 Sum_probs=201.9
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC---CCCCcccccceeec-
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFEA- 160 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~~- 160 (489)
+|++++.||+|+||+||+|+++. +++.||+|.++..... ......+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~ 74 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPH-----SGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATS 74 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECC-----CCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccc
Confidence 58999999999999999999987 5788999998753211 11112334466666554 79999999998864
Q ss_pred ----CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 161 ----SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 161 ----~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
...+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 75 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 75 RTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred cCCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccC
Confidence 346899999996 589888877655569999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+++.....
T Consensus 154 ~~~~~~~~------------------------------------------------------------------------ 161 (288)
T cd07863 154 LARIYSCQ------------------------------------------------------------------------ 161 (288)
T ss_pred ccccccCc------------------------------------------------------------------------
Confidence 97432100
Q ss_pred ccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC-----CCCCCCC
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK-----PLTFPRI 391 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~-----~~~~p~~ 391 (489)
.......||+.|+|||++.+..++.++|||||||++|||++|.+||.+....+.+.++... ...++..
T Consensus 162 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 162 -------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred -------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence 0012236899999999999988999999999999999999999999888776665555431 0011100
Q ss_pred CC-----------CCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 392 GV-----------SSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 392 ~~-----------~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.. ..... ......+.+||.+||+.||++||++. +++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~----~~l~hp~f 288 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAF----RALQHPFF 288 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHH----HHhcCCCC
Confidence 00 00000 01123578999999999999999987 99999998
No 121
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.8e-45 Score=371.01 Aligned_cols=262 Identities=27% Similarity=0.396 Sum_probs=203.5
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC-
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~- 161 (489)
.++|++.+.||+|+||.||+|.+.. .++.||||++...... .....++.+|+.+++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 89 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAV-----LDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 89 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecC-----CCceEEEEEeCCcccC-hHHHHHHHHHHHHHHHhCCCchhceeeeeeccc
Confidence 4789999999999999999999875 5788999999754322 22345566799999999999999999988643
Q ss_pred -----ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 162 -----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 162 -----~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
...|+||||++ ++|.+.+.. .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 90 SLEEFQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cccccceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCc
Confidence 35799999995 567666643 48899999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+++....
T Consensus 165 ~~~~~~~------------------------------------------------------------------------- 171 (355)
T cd07874 165 LARTAGT------------------------------------------------------------------------- 171 (355)
T ss_pred ccccCCC-------------------------------------------------------------------------
Confidence 9842210
Q ss_pred ccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC-----------
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP----------- 385 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~----------- 385 (489)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+....
T Consensus 172 ------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 172 ------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred ------ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 001123468999999999999999999999999999999999999999877554443332110
Q ss_pred -----------CC-----CCCC----CCCCch--hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 386 -----------LT-----FPRI----GVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 386 -----------~~-----~p~~----~~~~~~--~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
.. ++.. ...... .......+++||.+||..||++||++. ++++||||..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~----ell~hp~~~~ 316 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD----EALQHPYINV 316 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHH----HHhcCcchhc
Confidence 00 0000 000000 000123578999999999999999997 9999999974
No 122
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-46 Score=372.82 Aligned_cols=259 Identities=30% Similarity=0.492 Sum_probs=230.6
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
.....|.+.+.||+|.|++|.+|++.. ++..||||.+.+.......... +.+|+.+|+.++|||||+|+.+.+.
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~-----t~~~VaiK~idkt~ln~~~~~k-~~rev~imk~l~HPnIvkl~~v~~t 126 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHIL-----TGTEVAIKIIDKTQLNPSKRQK-LGREVDIMKSLNHPNIVKLFSVIET 126 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecC-----CCceEEEEEehhcccChHHHHH-HHHHHHHHHhcCCcceeeeeeeeee
Confidence 345789999999999999999999987 5788999999988776544333 7789999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
...+|+||||+.+|++++++.++ +++.+.+++.++.|++.|++|||+++|||||||++||||+.+.++||+|||++..
T Consensus 127 ~~~lylV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~ 204 (596)
T KOG0586|consen 127 EATLYLVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTF 204 (596)
T ss_pred cceeEEEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeecccccee
Confidence 99999999999999999999987 6788899999999999999999999999999999999999999999999999855
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+..
T Consensus 205 ~~~----------------------------------------------------------------------------- 207 (596)
T KOG0586|consen 205 FDY----------------------------------------------------------------------------- 207 (596)
T ss_pred ecc-----------------------------------------------------------------------------
Confidence 432
Q ss_pred ccccCCccccCCCCccCcchhcCCCC-CCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.....++||++.|.|||++.|..| ++.+|+||+|++||-|+.|..||+|.+-.+.-.+.+.+.+.+|.....
T Consensus 208 --~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~----- 280 (596)
T KOG0586|consen 208 --GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSC----- 280 (596)
T ss_pred --cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeec-----
Confidence 123457799999999999999987 889999999999999999999999999888877888888777765443
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
++.+||+++|..+|.+|++.. ++..|.|....
T Consensus 281 ----dce~lLrk~lvl~Pskr~~~d----qim~~~W~n~~ 312 (596)
T KOG0586|consen 281 ----DCEDLLRKFLVLNPSKRGPCD----QIMKDRWRNDL 312 (596)
T ss_pred ----hhHHHHHHhhccCccccCCHH----Hhhhhcccchh
Confidence 478999999999999999997 99999998643
No 123
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.1e-45 Score=368.69 Aligned_cols=262 Identities=27% Similarity=0.380 Sum_probs=206.7
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC--
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS-- 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-- 161 (489)
++|++++.||+|+||+||+|.+.. +++.||||++.+.... ......+.+|+.+|+.++||||+++++++...
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTR-----LRQKVAVKKLSRPFQS-LIHARRTYRELRLLKHMKHENVIGLLDVFTPATS 88 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECC-----CCCEEEEEEeCchhhh-hHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc
Confidence 789999999999999999999876 5678999999765332 22344566799999999999999999988543
Q ss_pred ----ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCC
Q 011302 162 ----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 162 ----~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~ 237 (489)
...|++||++ |++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 89 IENFNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred ccccCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCcc
Confidence 4579999998 8999887754 4699999999999999999999999999999999999999999999999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
++....
T Consensus 165 ~~~~~~-------------------------------------------------------------------------- 170 (343)
T cd07878 165 ARQADD-------------------------------------------------------------------------- 170 (343)
T ss_pred ceecCC--------------------------------------------------------------------------
Confidence 742210
Q ss_pred cccccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCC------
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR------ 390 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~------ 390 (489)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.......+.
T Consensus 171 -------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07878 171 -------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKI 243 (343)
T ss_pred -------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 1123468999999999987 46899999999999999999999999887765555444321100000
Q ss_pred -----------CCCCCchhH-----HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 391 -----------IGVSSSKEF-----EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 391 -----------~~~~~~~~~-----~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
........+ .....+.+||.+||..||++||++. +++.||||....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~----ell~hp~~~~~~ 305 (343)
T cd07878 244 SSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISAS----EALAHPYFSQYH 305 (343)
T ss_pred chhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHH----HHhcCcchhccC
Confidence 000000000 0112478999999999999999987 999999998753
No 124
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.8e-45 Score=356.97 Aligned_cols=276 Identities=23% Similarity=0.291 Sum_probs=218.1
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
|++..++|++.+.||+|+||.||+|.+++.........||+|.+...... .....+.+|+.+++.++||||+++++++
T Consensus 1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 78 (288)
T cd05061 1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL--RERIEFLNEASVMKGFTCHHVVRLLGVV 78 (288)
T ss_pred CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 45677899999999999999999998876444445678999998644321 1223466799999999999999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCC--------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcE
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQP--------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHI 230 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~v 230 (489)
.+....|+||||+++|+|.+++.... ...++...+..++.||+.||.|||+++|+||||||+|||++.++.+
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcE
Confidence 99999999999999999999987532 1234566788899999999999999999999999999999999999
Q ss_pred EEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCcc
Q 011302 231 MLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQE 310 (489)
Q Consensus 231 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (489)
||+|||+++.......
T Consensus 159 ~L~Dfg~~~~~~~~~~---------------------------------------------------------------- 174 (288)
T cd05061 159 KIGDFGMTRDIYETDY---------------------------------------------------------------- 174 (288)
T ss_pred EECcCCcccccccccc----------------------------------------------------------------
Confidence 9999999843211000
Q ss_pred ccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCC-CC
Q 011302 311 LLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPL-TF 388 (489)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~~ 388 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+..+.. ..
T Consensus 175 ------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 242 (288)
T cd05061 175 ------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 242 (288)
T ss_pred ------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 000111245678999999998889999999999999999998 8999998877776666654422 11
Q ss_pred CCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHc--CCCcCCCCc
Q 011302 389 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR--HEFFKGINW 441 (489)
Q Consensus 389 p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~--hp~f~~~~~ 441 (489)
+. .. ...+.+||.+||+.||++||++.+.++.+.. ||||++++|
T Consensus 243 ~~---~~------~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 243 PD---NC------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred CC---CC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 11 11 1258999999999999999999855544444 999999998
No 125
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.4e-45 Score=382.43 Aligned_cols=261 Identities=26% Similarity=0.355 Sum_probs=214.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
..|.+.+.||+|+||.||+|..... .+..||+|.+..... .....+.+|+.+|+.++|||||+++++|..++.
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~----~~~~vv~K~~~~~~~---~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~ 139 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSD----PKEKVVAKFVMLNDE---RQAAYARSELHCLAACDHFGIVKHFDDFKSDDK 139 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCC----CCeEEEEEEcccCCH---HHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCE
Confidence 4599999999999999999987652 256788887654322 223456679999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
+||||||++||+|.+++... ....+++.++..++.||+.||+|||++|||||||||+|||++.++.+||+|||+++.+
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence 99999999999999877542 2356899999999999999999999999999999999999999999999999998432
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
....
T Consensus 220 ~~~~---------------------------------------------------------------------------- 223 (478)
T PTZ00267 220 SDSV---------------------------------------------------------------------------- 223 (478)
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 1100
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+..+..... ....
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~------ 295 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPF--PCPV------ 295 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--CccC------
Confidence 00112345799999999999999999999999999999999999999999888887777776543211 1111
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
...+.+||.+||..||++||++. +++.|+|++.+
T Consensus 296 s~~~~~li~~~L~~dP~~Rps~~----~~l~~~~~~~~ 329 (478)
T PTZ00267 296 SSGMKALLDPLLSKNPALRPTTQ----QLLHTEFLKYV 329 (478)
T ss_pred CHHHHHHHHHHhccChhhCcCHH----HHHhCHHHHHH
Confidence 12589999999999999999997 99999998643
No 126
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=6.6e-45 Score=354.45 Aligned_cols=258 Identities=34% Similarity=0.665 Sum_probs=199.5
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHH---HhCCCCCcccccceeecCceEEEE
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL---TMLDHPFLPTLYAEFEASHYSCLV 167 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l---~~l~hpnIv~l~~~~~~~~~~~lV 167 (489)
.||+|+||.||+|.+.. +++.||+|.+.+.............+|..++ ...+||||+.+++++..++..|+|
T Consensus 1 ~lg~G~~g~Vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKAD-----TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECC-----CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEE
Confidence 48999999999999876 5789999999765433222222233344333 345799999999999999999999
Q ss_pred EeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccc
Q 011302 168 MEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKL 247 (489)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 247 (489)
|||++||+|.+++... +.+++..+..++.|++.||+|||+++|+||||||+|||++.++.++|+|||++.....
T Consensus 76 ~e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~---- 149 (279)
T cd05633 76 LDLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK---- 149 (279)
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccc----
Confidence 9999999999888765 5699999999999999999999999999999999999999999999999998732110
Q ss_pred cCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCc
Q 011302 248 LRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSK 327 (489)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (489)
....
T Consensus 150 ----------------------------------------------------------------------------~~~~ 153 (279)
T cd05633 150 ----------------------------------------------------------------------------KKPH 153 (279)
T ss_pred ----------------------------------------------------------------------------cCcc
Confidence 0011
Q ss_pred cccCCCCccCcchhc-CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH--HHHHHH-hcCCCCCCCCCCCCchhHHHHh
Q 011302 328 SFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE--KTLINI-LKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 328 ~~~Gt~~y~aPE~l~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i-~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
...||+.|+|||.+. +..++.++|||||||++|||++|..||...... ..+... .......|.. ...
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 224 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDS---------FSP 224 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccc---------cCH
Confidence 235899999999986 456899999999999999999999999764322 222221 1112222211 112
Q ss_pred hHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc
Q 011302 404 KLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~ 444 (489)
.+.+||.+||..||.+|++.. ..++++++||||++++|...
T Consensus 225 ~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~ 266 (279)
T cd05633 225 ELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQV 266 (279)
T ss_pred HHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHH
Confidence 589999999999999999632 34569999999999999865
No 127
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.8e-45 Score=382.53 Aligned_cols=264 Identities=27% Similarity=0.396 Sum_probs=216.0
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|++.+.||+|+||+||+|++.. +++.||||++...... .....++.+|+.++..++|+||++++..+...
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~-----~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVS-----DGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKK 103 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcC-----CCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence 44799999999999999999999876 5789999999765332 23345677899999999999999998877533
Q ss_pred c--------eEEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEE
Q 011302 162 H--------YSCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIM 231 (489)
Q Consensus 162 ~--------~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vk 231 (489)
. .+++||||+++|+|.+++... ....+++..+..++.|++.||.|||++|||||||||+|||++.++.+|
T Consensus 104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEE
Confidence 2 478999999999999988643 235689999999999999999999999999999999999999999999
Q ss_pred EcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccc
Q 011302 232 LSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQEL 311 (489)
Q Consensus 232 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (489)
|+|||+++.+....
T Consensus 184 L~DFGls~~~~~~~------------------------------------------------------------------ 197 (496)
T PTZ00283 184 LGDFGFSKMYAATV------------------------------------------------------------------ 197 (496)
T ss_pred EEecccCeeccccc------------------------------------------------------------------
Confidence 99999984332100
Q ss_pred cCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCC
Q 011302 312 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRI 391 (489)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~ 391 (489)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+..+.....
T Consensus 198 ----------~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~-- 265 (496)
T PTZ00283 198 ----------SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPL-- 265 (496)
T ss_pred ----------cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC--
Confidence 00112345799999999999999999999999999999999999999999888777777766543211
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
... ...++.+||.+||+.||.+||++. ++++|||++..
T Consensus 266 ~~~------~~~~l~~li~~~L~~dP~~RPs~~----ell~~p~~~~~ 303 (496)
T PTZ00283 266 PPS------ISPEMQEIVTALLSSDPKRRPSSS----KLLNMPICKLF 303 (496)
T ss_pred CCC------CCHHHHHHHHHHcccChhhCcCHH----HHHhCHHHHHh
Confidence 111 112589999999999999999997 99999998754
No 128
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.5e-44 Score=347.80 Aligned_cols=258 Identities=38% Similarity=0.684 Sum_probs=212.3
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHH-HhCCCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL-TMLDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l-~~l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||.||+|.+.. .++.||+|++.+...........+..|..++ ...+|+||+++++++..++.+|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRS-----TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecC-----CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEE
Confidence 569999999999999876 4678999999765544333344444555444 4458999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||++|++|.+++... ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++.+||+|||+++....
T Consensus 77 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 77 EYLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred eccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 999999999998765 5689999999999999999999999999999999999999999999999998732110
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
...
T Consensus 150 -----------------------------------------------------------------------------~~~ 152 (260)
T cd05611 150 -----------------------------------------------------------------------------NKK 152 (260)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 112
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
..|++.|+|||.+.+..++.++|||||||++|||++|..||...+....+..+......++...... ....+.++
T Consensus 153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 227 (260)
T cd05611 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEF-----CSPEAVDL 227 (260)
T ss_pred CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCccccc-----CCHHHHHH
Confidence 3588899999999988889999999999999999999999998888777777766554443322211 12358999
Q ss_pred HHHHhhcCcccccCCCCChHHHHcCCCcCCCCcc
Q 011302 409 ISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 442 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~ 442 (489)
|.+||+.||++||++. .+++++.||||+.++|+
T Consensus 228 i~~~l~~~p~~R~~~~-~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 228 INRLLCMDPAKRLGAN-GYQEIKSHPFFKSINWD 260 (260)
T ss_pred HHHHccCCHHHccCCC-cHHHHHcChHhhcCCCC
Confidence 9999999999999873 55699999999999995
No 129
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.7e-45 Score=365.72 Aligned_cols=258 Identities=22% Similarity=0.366 Sum_probs=198.8
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
..+|++++.||+|+||.||+|++.. .+..||+|+..+.. ...|+.+++.++||||+++++++....
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~valK~~~~~~---------~~~E~~~l~~l~h~~iv~~~~~~~~~~ 130 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPG-----QPDPVVLKIGQKGT---------TLIEAMLLQNVNHPSVIRMKDTLVSGA 130 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECC-----CCceEEEEeCCccc---------cHHHHHHHHhCCCCCCcChhheEEeCC
Confidence 4579999999999999999999886 46789999864432 234889999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+ .++|.+++... ...+++..++.|+.||+.||.|||++|||||||||+|||++.++.+||+|||+++...
T Consensus 131 ~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 131 ITCMVLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred eeEEEEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 999999999 57888887654 3579999999999999999999999999999999999999999999999999973210
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
.
T Consensus 209 ~------------------------------------------------------------------------------- 209 (357)
T PHA03209 209 V------------------------------------------------------------------------------- 209 (357)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCC-CCCCCc---------HHHHHHHhc----CCCCC
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENN---------EKTLINILK----KPLTF 388 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~P-f~~~~~---------~~~~~~i~~----~~~~~ 388 (489)
........||+.|+|||++.+..++.++|||||||++|||+++..| |..... ...+..+.. .+..+
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 289 (357)
T PHA03209 210 APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEF 289 (357)
T ss_pred CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhc
Confidence 0011234699999999999999999999999999999999985444 443211 111222221 11112
Q ss_pred CCCCC---------------------CCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 389 PRIGV---------------------SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 389 p~~~~---------------------~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
+.... ...........+.+||.+||+.||.+||++. ++++||||+.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~----e~l~hp~f~~~ 357 (357)
T PHA03209 290 PRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAE----EILNYPMFAQL 357 (357)
T ss_pred CCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHH----HHhcCchhccC
Confidence 20000 0000011123567899999999999999997 99999999864
No 130
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-46 Score=341.61 Aligned_cols=263 Identities=30% Similarity=0.443 Sum_probs=215.9
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+|+.|--|.... ++..||||++.+..- ....++.+|++++..++ |+||+.|+++|+++..+||||
T Consensus 84 e~LGeGAyasVqtcv~i~-----t~~EYAVKiidKq~g---HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQ-----TGKEYAVKIIDKQPG---HSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhcCccceeeeeeeeec-----cchhhhhhhhhcCCc---hHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 579999999999988776 578899999987532 23456778999998875 999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC---cEEEcccCCCcccccCc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG---HIMLSDFDLSFKCDVVP 245 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~---~vkl~DFG~a~~~~~~~ 245 (489)
|-|.||.|...++++ ..|++.++..+..+|+.||.|||.+||.||||||+|||..... -||||||.++.-....
T Consensus 156 EKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~- 232 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN- 232 (463)
T ss_pred ecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccC-
Confidence 999999999998876 6799999999999999999999999999999999999997654 4899999986211000
Q ss_pred cccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccC
Q 011302 246 KLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 325 (489)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (489)
..| . ......
T Consensus 233 --------------------~~~-----------------------------------------------s---pastP~ 242 (463)
T KOG0607|consen 233 --------------------NDC-----------------------------------------------S---PASTPE 242 (463)
T ss_pred --------------------CCC-----------------------------------------------C---CCCCcc
Confidence 000 0 000123
Q ss_pred CccccCCCCccCcchhc---C--CCCCCcccHHHHHHHHHHHhhCCCCCCCC-------C--------cHHHHHHHhcCC
Q 011302 326 SKSFVGTHEYLAPEVIS---G--QGHGSAVDWWTLGVFLYEMLYGTTPFKGE-------N--------NEKTLINILKKP 385 (489)
Q Consensus 326 ~~~~~Gt~~y~aPE~l~---~--~~~~~~~DiwSlGvil~elltG~~Pf~~~-------~--------~~~~~~~i~~~~ 385 (489)
..+.+|+..|||||++. + ..|+.++|.||||||||-||.|.+||.|. + ....++.|..+.
T Consensus 243 L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGk 322 (463)
T KOG0607|consen 243 LLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK 322 (463)
T ss_pred ccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccC
Confidence 44568999999999973 3 34899999999999999999999999763 1 346788899999
Q ss_pred CCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcc
Q 011302 386 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 442 (489)
Q Consensus 386 ~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~ 442 (489)
++||+..+. ....+++|||+.+|.+|+..|+.+. ++++|||++.+..+
T Consensus 323 YeFPdkdWa-----hIS~eakdlisnLlvrda~~rlsa~----~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 323 YEFPDKDWA-----HISSEAKDLISNLLVRDAKQRLSAA----QVLNHPWVQRCAPE 370 (463)
T ss_pred CcCChhhhH-----HhhHHHHHHHHHHHhccHHhhhhhh----hccCCccccccchh
Confidence 999975433 3344789999999999999999998 99999999987654
No 131
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.5e-45 Score=362.12 Aligned_cols=260 Identities=27% Similarity=0.365 Sum_probs=191.4
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee--cCceEEE
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE--ASHYSCL 166 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~--~~~~~~l 166 (489)
.++||+|+||+||+|+++.. ..++.||+|.+..... ...+.+|+.+|+.++||||+++++++. .+..+|+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~---~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~l 77 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDG---KDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 77 (317)
T ss_pred ccccccCCCeEEEEEEEccC---CCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEE
Confidence 46899999999999997652 2467899999875422 123456999999999999999999885 3567899
Q ss_pred EEeecCCCchHHHHHhC-------CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEe----ccCCcEEEccc
Q 011302 167 VMEYCPGGDLYAARQRQ-------PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLV----REDGHIMLSDF 235 (489)
Q Consensus 167 V~E~~~gg~L~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl----~~~~~vkl~DF 235 (489)
||||+ +++|.+++... ....+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+||
T Consensus 78 v~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 78 LFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred EEecc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 99999 56888876532 12358899999999999999999999999999999999999 45689999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+|+.+.....
T Consensus 157 G~a~~~~~~~~--------------------------------------------------------------------- 167 (317)
T cd07868 157 GFARLFNSPLK--------------------------------------------------------------------- 167 (317)
T ss_pred CceeccCCCCc---------------------------------------------------------------------
Confidence 99843321000
Q ss_pred cccccccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCc---------HHHHHHHhcC-
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENN---------EKTLINILKK- 384 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~---------~~~~~~i~~~- 384 (489)
........+||+.|+|||++.+. .++.++|||||||++|||++|++||.+... ...+..+...
T Consensus 168 ------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 168 ------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred ------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 00112235789999999999875 489999999999999999999999975432 1222222110
Q ss_pred --CC--------CCCCC-------------CCCCchh-----HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 385 --PL--------TFPRI-------------GVSSSKE-----FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 385 --~~--------~~p~~-------------~~~~~~~-----~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+. ..+.. ....... ......+.+||.+||++||.+|+++. ++++||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~----e~l~hp~f 317 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE----QAMQDPYF 317 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHH----HHhcCCCC
Confidence 00 00000 0000000 00122478999999999999999998 99999998
No 132
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-45 Score=366.93 Aligned_cols=257 Identities=21% Similarity=0.327 Sum_probs=209.1
Q ss_pred hcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccc
Q 011302 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYA 156 (489)
Q Consensus 77 ~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 156 (489)
..|++..+++.+...||+|+||+||+|++.+ .||||+++.+.... +.++.|.+|+.++++-+|.||+-+.|
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--------dVAVK~Lnv~~pt~-~qlqaFKnEVa~lkkTRH~NIlLFMG 455 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--------DVAVKLLNVDDPTP-EQLQAFKNEVAVLKKTRHENILLFMG 455 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--------ceEEEEEecCCCCH-HHHHHHHHHHHHHhhcchhhheeeeh
Confidence 5677888999999999999999999999997 47999998766553 47888999999999999999999999
Q ss_pred eeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 157 EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
++..... .||+-||+|-+|+.+++-.. ..|.....+.|++||++||.|||.++|||||||..||+|.++++|||+|||
T Consensus 456 ~~~~p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 456 ACMNPPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred hhcCCce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEeccc
Confidence 9998877 99999999999999987654 679999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
++..-..+.
T Consensus 534 Latvk~~w~----------------------------------------------------------------------- 542 (678)
T KOG0193|consen 534 LATVKTRWS----------------------------------------------------------------------- 542 (678)
T ss_pred ceeeeeeec-----------------------------------------------------------------------
Confidence 983211100
Q ss_pred ccccccccCCccccCCCCccCcchhcC---CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCC
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISG---QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGV 393 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~ 393 (489)
.........|...|||||+++. .+|+..+|||||||++|||++|..||...+..+++-.+-++ +-.|+...
T Consensus 543 -----g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG-~l~pd~s~ 616 (678)
T KOG0193|consen 543 -----GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRG-YLMPDLSK 616 (678)
T ss_pred -----cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccc-ccCccchh
Confidence 0011123357889999999975 45899999999999999999999999954444444333333 22232221
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
... ....++++|+..||..++++||...
T Consensus 617 ~~s---~~pk~mk~Ll~~C~~~~~~eRP~F~ 644 (678)
T KOG0193|consen 617 IRS---NCPKAMKRLLSDCWKFDREERPLFP 644 (678)
T ss_pred hhc---cCHHHHHHHHHHHHhcCcccCccHH
Confidence 111 1122589999999999999999987
No 133
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3e-44 Score=345.98 Aligned_cols=260 Identities=28% Similarity=0.427 Sum_probs=212.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHH--HHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
++|.+.+.||+|+||.||+|.+.. +++.||+|.+..... ........+.+|+.+++.++||||+++++++.++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~-----~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVD-----TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcC-----CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC
Confidence 579999999999999999999876 567899999865422 1223445678899999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
+.+|+||||++|++|.+++... ..+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++..
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999999999988765 56899999999999999999999999999999999999999999999999997432
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
......
T Consensus 155 ~~~~~~-------------------------------------------------------------------------- 160 (263)
T cd06625 155 QTICSS-------------------------------------------------------------------------- 160 (263)
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 110000
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
........|+..|+|||++.+..++.++|||||||++|||++|+.||...+.......+........ .... .
T Consensus 161 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~------~ 232 (263)
T cd06625 161 -GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQ-LPSH------V 232 (263)
T ss_pred -cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCC-CCcc------C
Confidence 0001233588899999999998899999999999999999999999988766655555544322211 1111 1
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
...+.+||.+||..+|++||++. ++++|+||
T Consensus 233 ~~~~~~li~~~l~~~p~~Rpt~~----~ll~~~~~ 263 (263)
T cd06625 233 SPDARNFLRRTFVENAKKRPSAE----ELLRHFFV 263 (263)
T ss_pred CHHHHHHHHHHhhcCcccCCCHH----HHhhCCCC
Confidence 12489999999999999999987 99999998
No 134
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-45 Score=382.21 Aligned_cols=274 Identities=29% Similarity=0.373 Sum_probs=215.5
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~ 157 (489)
..++..++++.+.|.+|||+.||+|++.+. +..||+|++-.. ....++.+.+|+.+|+.|. |+|||.+++.
T Consensus 32 ~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~-----~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yids 103 (738)
T KOG1989|consen 32 FTVGSHRVTVEKVLAEGGFAQVYLAQDVKG-----GKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDS 103 (738)
T ss_pred EEECCEEEEEEEEEccCCcEEEEEEEecCC-----CceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEecc
Confidence 346677899999999999999999999873 378999988644 2355677788999999996 9999999993
Q ss_pred e-e----c--CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCC--CeeecCCCCCeEeccCC
Q 011302 158 F-E----A--SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMG--IVYRDLKPENVLVREDG 228 (489)
Q Consensus 158 ~-~----~--~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDIKp~NILl~~~~ 228 (489)
. . . .-.++|+||||.||.|-+++..+...+|++.+++.|+.|+++||.+||... |||||||-|||||..+|
T Consensus 104 s~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g 183 (738)
T KOG1989|consen 104 SAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG 183 (738)
T ss_pred ccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC
Confidence 3 1 1 236789999999999999998776677999999999999999999999998 99999999999999999
Q ss_pred cEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCC
Q 011302 229 HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHD 308 (489)
Q Consensus 229 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (489)
+.||||||.|...-..+. +...+..
T Consensus 184 ~~KLCDFGSatt~~~~~~------~~~e~~~------------------------------------------------- 208 (738)
T KOG1989|consen 184 NYKLCDFGSATTKILSPT------SAQEVNY------------------------------------------------- 208 (738)
T ss_pred CEEeCcccccccccCCCc------cHHHHHH-------------------------------------------------
Confidence 999999999843222111 0000000
Q ss_pred ccccCCccccccccccCCccccCCCCccCcchhc---CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC
Q 011302 309 QELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 385 (489)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~ 385 (489)
..+. -...-|+.|+|||+|. +.+.+.|+|||||||+||-|++...||..... .+|+.+.
T Consensus 209 ---------ve~e-----I~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~ 270 (738)
T KOG1989|consen 209 ---------VEEE-----IEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGN 270 (738)
T ss_pred ---------HHHH-----HHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEecc
Confidence 0000 0113589999999984 67789999999999999999999999987643 4688999
Q ss_pred CCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHH----cCCCcCCCC
Q 011302 386 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIK----RHEFFKGIN 440 (489)
Q Consensus 386 ~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll----~hp~f~~~~ 440 (489)
+.+|.....+ ..+.+||+.||+.||++||++.+.+.++. .+.++..+.
T Consensus 271 Y~~P~~p~ys-------~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~~ 322 (738)
T KOG1989|consen 271 YSFPPFPNYS-------DRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDIY 322 (738)
T ss_pred ccCCCCccHH-------HHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccccc
Confidence 9999763332 25899999999999999999985544443 345555544
No 135
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.4e-44 Score=360.29 Aligned_cols=272 Identities=23% Similarity=0.325 Sum_probs=206.7
Q ss_pred eeeeeccC--CceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEE
Q 011302 88 LLRRLGSG--DIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (489)
Q Consensus 88 ~~~~lG~G--~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 165 (489)
++++||+| +||+||++.++. +++.||+|.+..+... ......+.+|+.+++.++||||++++++|..++..|
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 75 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKP-----TGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 75 (327)
T ss_pred hhhhccccccceEEEEEEeecc-----cCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEE
Confidence 46789999 789999999887 6789999999765432 233455677999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCc
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVP 245 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~ 245 (489)
+||||+++|+|.+++.......+++..++.++.||+.||+|||++|||||||||+|||++.++.++++|||.+.......
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 76 VVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred EEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 99999999999999876544568999999999999999999999999999999999999999999999998652211000
Q ss_pred cccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccC
Q 011302 246 KLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 325 (489)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (489)
... ......
T Consensus 156 ~~~-----------------------------------------------------------------------~~~~~~ 164 (327)
T cd08227 156 QRL-----------------------------------------------------------------------RVVHDF 164 (327)
T ss_pred ccc-----------------------------------------------------------------------cccccc
Confidence 000 000000
Q ss_pred CccccCCCCccCcchhcC--CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCC-------C------
Q 011302 326 SKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP-------R------ 390 (489)
Q Consensus 326 ~~~~~Gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p-------~------ 390 (489)
.....++..|+|||++.+ ..++.++|||||||++|||++|..||.................... .
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (327)
T cd08227 165 PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMK 244 (327)
T ss_pred cccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccC
Confidence 112357788999999976 4589999999999999999999999987655444333332211100 0
Q ss_pred ----------------------CCCCC--chhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 391 ----------------------IGVSS--SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 391 ----------------------~~~~~--~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
..... .........+.+||.+||+.||++||++. ++++||||+.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~----ell~~p~f~~~~ 314 (327)
T cd08227 245 PSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSAS----TLLNHSFFKQIK 314 (327)
T ss_pred CcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHH----HHhcChhhhhcc
Confidence 00000 00001224688999999999999999998 999999998764
No 136
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=367.56 Aligned_cols=250 Identities=28% Similarity=0.430 Sum_probs=211.8
Q ss_pred HhhcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccc
Q 011302 75 RRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTL 154 (489)
Q Consensus 75 ~~~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 154 (489)
+...|++.++...-++-||+|+-|.||+|+.++ +.||||.++.-.. .++.-|++|+||||+.|
T Consensus 115 q~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~n-------etVAVKKV~elkE----------TdIKHLRkLkH~NII~F 177 (904)
T KOG4721|consen 115 QEELWEIPFEEISELEWLGSGAQGAVFLGRLHN-------ETVAVKKVRELKE----------TDIKHLRKLKHPNIITF 177 (904)
T ss_pred hhhhccCCHHHhhhhhhhccCcccceeeeeccC-------ceehhHHHhhhhh----------hhHHHHHhccCcceeeE
Confidence 446678888888889999999999999999886 6789998853321 26777999999999999
Q ss_pred cceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcc
Q 011302 155 YAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSD 234 (489)
Q Consensus 155 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~D 234 (489)
.|+|....++|||||||..|-|+.+|+.. ..+.......+..+|+.||.|||.++|||||||.-||||..+..|||+|
T Consensus 178 kGVCtqsPcyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsD 255 (904)
T KOG4721|consen 178 KGVCTQSPCYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISD 255 (904)
T ss_pred eeeecCCceeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEecc
Confidence 99999999999999999999999999875 6788899999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCC
Q 011302 235 FDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDD 314 (489)
Q Consensus 235 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (489)
||.++.....
T Consensus 256 FGTS~e~~~~---------------------------------------------------------------------- 265 (904)
T KOG4721|consen 256 FGTSKELSDK---------------------------------------------------------------------- 265 (904)
T ss_pred ccchHhhhhh----------------------------------------------------------------------
Confidence 9987433211
Q ss_pred ccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCC
Q 011302 315 PEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 315 ~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 394 (489)
...-+|+||..|||||+|.+++.+.|+|||||||+|||||||+.||...+...++--+-.+.+.+|....
T Consensus 266 ---------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPst- 335 (904)
T KOG4721|consen 266 ---------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPST- 335 (904)
T ss_pred ---------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCccc-
Confidence 1234679999999999999999999999999999999999999999887766555444444444443321
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
++. .++=||+.||...|.+||++. +||.|
T Consensus 336 cP~------GfklL~Kqcw~sKpRNRPSFr----qil~H 364 (904)
T KOG4721|consen 336 CPD------GFKLLLKQCWNSKPRNRPSFR----QILLH 364 (904)
T ss_pred Cch------HHHHHHHHHHhcCCCCCccHH----HHHHH
Confidence 222 377899999999999999998 89888
No 137
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-44 Score=391.56 Aligned_cols=267 Identities=27% Similarity=0.443 Sum_probs=213.3
Q ss_pred cCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccce
Q 011302 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (489)
Q Consensus 78 ~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 157 (489)
.+.+..++|.+++.||+|+||+||+|++.. .+..||+|++...... ......+..|+.+|+.++|||||+++++
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~-----tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~ 80 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKR-----TQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDR 80 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECC-----CCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEE
Confidence 345667899999999999999999999986 5789999998754332 2234567789999999999999999998
Q ss_pred eec--CceEEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhC-------CCeeecCCCCCeEecc
Q 011302 158 FEA--SHYSCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMM-------GIVYRDLKPENVLVRE 226 (489)
Q Consensus 158 ~~~--~~~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~-------~iiHrDIKp~NILl~~ 226 (489)
|.+ ...+||||||+++|+|.+++... ....+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 81 f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s 160 (1021)
T PTZ00266 81 FLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST 160 (1021)
T ss_pred EEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence 854 46799999999999999988653 225699999999999999999999984 4999999999999964
Q ss_pred -----------------CCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccc
Q 011302 227 -----------------DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNK 289 (489)
Q Consensus 227 -----------------~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (489)
.+.+||+|||++..+..
T Consensus 161 ~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~---------------------------------------------- 194 (1021)
T PTZ00266 161 GIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI---------------------------------------------- 194 (1021)
T ss_pred CccccccccccccccCCCCceEEccCCccccccc----------------------------------------------
Confidence 23589999999843210
Q ss_pred cccccccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcC--CCCCCcccHHHHHHHHHHHhhCCC
Q 011302 290 KKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTT 367 (489)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~elltG~~ 367 (489)
.......+||+.|+|||++.+ ..++.++||||||||||||++|..
T Consensus 195 ---------------------------------~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~ 241 (1021)
T PTZ00266 195 ---------------------------------ESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKT 241 (1021)
T ss_pred ---------------------------------cccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCC
Confidence 001123479999999999965 347899999999999999999999
Q ss_pred CCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCc
Q 011302 368 PFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 441 (489)
Q Consensus 368 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~ 441 (489)
||...+....+...+.....+|.... ..++.+||.+||..+|.+||++. ++|.|+||+.+..
T Consensus 242 PF~~~~~~~qli~~lk~~p~lpi~~~--------S~eL~dLI~~~L~~dPeeRPSa~----QlL~h~~ik~i~~ 303 (1021)
T PTZ00266 242 PFHKANNFSQLISELKRGPDLPIKGK--------SKELNILIKNLLNLSAKERPSAL----QCLGYQIIKNVGP 303 (1021)
T ss_pred CCCcCCcHHHHHHHHhcCCCCCcCCC--------CHHHHHHHHHHhcCChhHCcCHH----HHhccHHHhhcCC
Confidence 99877766555554443333332111 12589999999999999999997 9999999987654
No 138
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.3e-44 Score=346.89 Aligned_cols=256 Identities=39% Similarity=0.724 Sum_probs=215.0
Q ss_pred eccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeec
Q 011302 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (489)
Q Consensus 92 lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 171 (489)
||.|+||.||+|++.. .++.||+|++.+...........+..|+.+++.++||||+++++++.++..+|+||||+
T Consensus 1 lg~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKS-----KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECC-----CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecC
Confidence 6999999999999886 56789999998765544445567888999999999999999999999999999999999
Q ss_pred CCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCc
Q 011302 172 PGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPK 251 (489)
Q Consensus 172 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 251 (489)
++++|.+++.+. ..+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 76 ~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~------- 146 (262)
T cd05572 76 LGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG------- 146 (262)
T ss_pred CCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc-------
Confidence 999999998775 45899999999999999999999999999999999999999999999999997432110
Q ss_pred chhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccC
Q 011302 252 LSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVG 331 (489)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 331 (489)
.......|
T Consensus 147 ------------------------------------------------------------------------~~~~~~~~ 154 (262)
T cd05572 147 ------------------------------------------------------------------------QKTWTFCG 154 (262)
T ss_pred ------------------------------------------------------------------------cccccccC
Confidence 01123468
Q ss_pred CCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC--cHHHHHHHhc--CCCCCCCCCCCCchhHHHHhhHHH
Q 011302 332 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN--NEKTLINILK--KPLTFPRIGVSSSKEFEEVVKLQD 407 (489)
Q Consensus 332 t~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--~~~~~~~i~~--~~~~~p~~~~~~~~~~~~~~~l~~ 407 (489)
++.|+|||.+.+..++.++|+|||||++|+|++|..||.... ..+...++.. ....+|... ...+.+
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 225 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYI---------DKAAKD 225 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCccc---------CHHHHH
Confidence 899999999988889999999999999999999999998776 5566666663 233333221 125899
Q ss_pred HHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcc
Q 011302 408 LISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWA 442 (489)
Q Consensus 408 li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~ 442 (489)
||.+||..||++|++.. ..++++++||||++.+|+
T Consensus 226 ~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 226 LIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred HHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 99999999999999943 345799999999999996
No 139
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.7e-44 Score=351.35 Aligned_cols=265 Identities=29% Similarity=0.463 Sum_probs=214.6
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.+.|+++++||.|+||.||+|++.. .+..|++|++.... ......+..|+.+++.++||||+++++++..++
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~-----~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 82 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKE-----TGALAAAKVIETKS---EEELEDYMVEIEILATCNHPYIVKLLGAFYWDG 82 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECC-----CCceEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence 4679999999999999999999886 56789999987542 233456677999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.+|+||||++|++|..++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV 161 (292)
T ss_pred eEEEEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999988775532 568999999999999999999999999999999999999999999999999873211
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 162 ~~------------------------------------------------------------------------------ 163 (292)
T cd06644 162 KT------------------------------------------------------------------------------ 163 (292)
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCccccCCCCccCcchhc-----CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCch
Q 011302 323 NARSKSFVGTHEYLAPEVIS-----GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
........|++.|+|||++. ...++.++|||||||++|||++|..||...+......++..... +......
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~-- 239 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP--PTLSQPS-- 239 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCC--ccCCCCc--
Confidence 00112345889999999985 34468899999999999999999999988776666555544322 1111100
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~ 444 (489)
.....+.+||.+||..||++||++. ++++||||..++|...
T Consensus 240 --~~~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~~~~~~ 280 (292)
T cd06644 240 --KWSMEFRDFLKTALDKHPETRPSAA----QLLEHPFVSSVTSNRP 280 (292)
T ss_pred --ccCHHHHHHHHHHhcCCcccCcCHH----HHhcCccccccccchh
Confidence 1112488999999999999999987 9999999999998764
No 140
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.7e-44 Score=355.33 Aligned_cols=268 Identities=27% Similarity=0.398 Sum_probs=208.9
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|++.+.||+|+||.||+|+++. ++..||+|.+...... .....+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~ 76 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKL-----TDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTE 76 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcC-----CCcEEEEEEEeccccc--CchhHHHHHHHHHHhcCCCCcceEEEEEecC
Confidence 35789999999999999999999876 5678999998754321 1223456799999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
+.+|+||||++ ++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 77 ~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 154 (301)
T cd07873 77 KSLTLVFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAK 154 (301)
T ss_pred CeEEEEEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence 99999999995 6898887654 346889999999999999999999999999999999999999999999999997321
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
...
T Consensus 155 ~~~----------------------------------------------------------------------------- 157 (301)
T cd07873 155 SIP----------------------------------------------------------------------------- 157 (301)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 100
Q ss_pred cccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC---C------------
Q 011302 322 INARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK---P------------ 385 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~---~------------ 385 (489)
........+++.|+|||++.+. .++.++|||||||++|||++|++||.+.+..+....+... +
T Consensus 158 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 158 -TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred -CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence 0001122578899999998764 4788999999999999999999999988766554443321 0
Q ss_pred ----CCCCCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 386 ----LTFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 386 ----~~~p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
..+|......... ...+..+++||.+||+.||.+||++. ++++||||+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~----eil~h~~f~~~~ 293 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAE----EAMKHPYFHCLG 293 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHH----HHhcCccccccc
Confidence 0011100000000 01123578999999999999999987 999999998765
No 141
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.2e-44 Score=349.44 Aligned_cols=261 Identities=31% Similarity=0.601 Sum_probs=202.1
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHH---HHHHhCCCCCcccccceeecCceEEEE
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK---VILTMLDHPFLPTLYAEFEASHYSCLV 167 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~---~~l~~l~hpnIv~l~~~~~~~~~~~lV 167 (489)
.||+|+||.||+|.+.. +++.||||.+.+...........+..|. .+++..+||||+++++++.+.+..|+|
T Consensus 1 ~ig~g~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKAD-----TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEec-----CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEE
Confidence 48999999999999876 5789999998764332212111222233 345556899999999999999999999
Q ss_pred EeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccc
Q 011302 168 MEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKL 247 (489)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 247 (489)
|||++||+|.+++... ..+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++..+..
T Consensus 76 ~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~---- 149 (278)
T cd05606 76 LDLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK---- 149 (278)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCc----
Confidence 9999999999888764 5799999999999999999999999999999999999999999999999998732210
Q ss_pred cCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCc
Q 011302 248 LRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSK 327 (489)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (489)
....
T Consensus 150 ----------------------------------------------------------------------------~~~~ 153 (278)
T cd05606 150 ----------------------------------------------------------------------------KKPH 153 (278)
T ss_pred ----------------------------------------------------------------------------cCCc
Confidence 0011
Q ss_pred cccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCC---cHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 328 SFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGEN---NEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 328 ~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~---~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
..+|+..|+|||++.+. .++.++||||+||++|||++|..||.+.. .......+......+|... +.
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------s~ 224 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF---------SP 224 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcC---------CH
Confidence 23689999999999754 58999999999999999999999998763 2222222322223333211 12
Q ss_pred hHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCccccccC
Q 011302 404 KLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALIRSI 447 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~~~~ 447 (489)
.+.++|.+||..+|.+|+... ..+.++++||||+.++|+.+...
T Consensus 225 ~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 269 (278)
T cd05606 225 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQ 269 (278)
T ss_pred HHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhhhc
Confidence 589999999999999999432 23459999999999999876433
No 142
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=9.1e-45 Score=348.65 Aligned_cols=256 Identities=38% Similarity=0.629 Sum_probs=208.3
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEE
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 165 (489)
|++++.||+|+||+||+|++.. .++.||+|++......... ......|..+++.++||||+++++++.+...+|
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~-----~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~ 74 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKK-----NGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLY 74 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETT-----TTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECC-----CCeEEEEEEeccccccccc-cchhhhhhhcccccccccccccccccccccccc
Confidence 7899999999999999999997 5778999999876544332 223344999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCc
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVP 245 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~ 245 (489)
+||||+++++|.+++... ..+++..+..++.||+.||++||++||+||||||+|||++.++.++|+|||.+.....
T Consensus 75 ~v~~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-- 150 (260)
T PF00069_consen 75 IVMEYCPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE-- 150 (260)
T ss_dssp EEEEEETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS--
T ss_pred cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 999999999999999843 6799999999999999999999999999999999999999999999999999732200
Q ss_pred cccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccC
Q 011302 246 KLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 325 (489)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (489)
....
T Consensus 151 ----------------------------------------------------------------------------~~~~ 154 (260)
T PF00069_consen 151 ----------------------------------------------------------------------------NNEN 154 (260)
T ss_dssp ----------------------------------------------------------------------------TTSE
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0112
Q ss_pred CccccCCCCccCcchhc-CCCCCCcccHHHHHHHHHHHhhCCCCCCCCC---cHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 326 SKSFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN---NEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 326 ~~~~~Gt~~y~aPE~l~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~---~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
.....||+.|+|||++. +..++.++||||||+++|+|++|..||.... ....+.+........+..... ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 229 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSR-----EK 229 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHT-----TS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccc-----hh
Confidence 23447899999999998 7778999999999999999999999999873 333333333322111111100 00
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
...+.+||.+||+.||++||++. ++++||||
T Consensus 230 ~~~l~~li~~~l~~~p~~R~~~~----~l~~~~~~ 260 (260)
T PF00069_consen 230 SEELRDLIKKMLSKDPEQRPSAE----ELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHHHSSSSGGGSTTHH----HHHTSGGG
T ss_pred HHHHHHHHHHHccCChhHCcCHH----HHhcCCCC
Confidence 13589999999999999999987 99999998
No 143
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.9e-44 Score=354.06 Aligned_cols=263 Identities=27% Similarity=0.346 Sum_probs=208.8
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|.+.. ++..||+|.+..+.. .....++.+|+.+++.++||||+++++++.+++.
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 73 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRP-----SGLIMARKLIHLEIK--PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGE 73 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcC-----CCeEEEEEEeccccC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCE
Confidence 479999999999999999999876 567899999865421 2334567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
+|+||||++|++|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++....
T Consensus 74 ~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 151 (308)
T cd06615 74 ISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 151 (308)
T ss_pred EEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence 99999999999999998765 568999999999999999999997 599999999999999999999999999873211
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
.
T Consensus 152 ~------------------------------------------------------------------------------- 152 (308)
T cd06615 152 D------------------------------------------------------------------------------- 152 (308)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCC----------
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIG---------- 392 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~---------- 392 (489)
......+|++.|+|||++.+..++.++|||||||++|||++|..||...+.......+.......+...
T Consensus 153 -~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 153 -SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred -cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence 011234689999999999888899999999999999999999999987654333222211110000000
Q ss_pred -------------------CCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 393 -------------------VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 393 -------------------~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
.+.........++.+||.+||..||++||++. ++++||||...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~----~ll~~~~~~~~ 293 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLK----ELTKHPFIKRA 293 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHH----HHhcChhhhhc
Confidence 00000001123588999999999999999987 99999999763
No 144
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.9e-44 Score=370.72 Aligned_cols=260 Identities=23% Similarity=0.334 Sum_probs=201.6
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
...|.+.+.||+|+||.||+|.+.. .++.||||.... ..+.+|+.+|++++|+|||++++++..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~-----~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~ 233 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPD-----YPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGG 233 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECC-----CCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECC
Confidence 4579999999999999999999887 467899996432 23456999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|||||++ .++|..++.... ..+++..++.|+.||+.||.|||++|||||||||+||||+.++.+||+|||+++.+.
T Consensus 234 ~~~lv~e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 234 LTCLVLPKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFAR 311 (461)
T ss_pred EEEEEEEcc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence 999999999 578988876542 469999999999999999999999999999999999999999999999999984321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
....
T Consensus 312 ~~~~---------------------------------------------------------------------------- 315 (461)
T PHA03211 312 GSWS---------------------------------------------------------------------------- 315 (461)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 1000
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC-------cHHHHHHHhc-CCC---CCCCC
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN-------NEKTLINILK-KPL---TFPRI 391 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-------~~~~~~~i~~-~~~---~~p~~ 391 (489)
.......+||+.|+|||++.+..++.++|||||||+||||++|..|+.... ....+.+++. ... .++..
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 001123579999999999999999999999999999999999887654321 1122233322 111 11110
Q ss_pred CC------------------CCchhH----HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 392 GV------------------SSSKEF----EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 392 ~~------------------~~~~~~----~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
.. .....| .....+.+||.+||..||.+||++. |+|+||||++
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~----elL~hp~f~~ 460 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAA----ELLRLPLFQS 460 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHH----HHhhCcccCC
Confidence 00 000001 1123588999999999999999998 9999999975
No 145
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=9e-44 Score=341.48 Aligned_cols=256 Identities=27% Similarity=0.450 Sum_probs=211.2
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec-Cce
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA-SHY 163 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~ 163 (489)
+|++++.||+|+||.||+|.++. .++.||+|.+..+... ......+..|+.+++.++|+||+++++.+.. +..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRT-----DGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGL 74 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcC-----CCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCE
Confidence 58999999999999999999876 4678999999765432 2234556779999999999999999998864 456
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||+++++|.+++.......+++.+++.++.|++.||+|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 75 ~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 75 LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred EEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 89999999999999998775556799999999999999999999999999999999999999999999999999733210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 155 ~------------------------------------------------------------------------------~ 156 (257)
T cd08223 155 Q------------------------------------------------------------------------------C 156 (257)
T ss_pred c------------------------------------------------------------------------------C
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+..+... .... ....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~ 228 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP--PMPK------DYSP 228 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCcc------ccCH
Confidence 0112346889999999999998999999999999999999999999988776666666554331 1111 1223
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.+.+||.+||+.||++||++. ++++||||
T Consensus 229 ~~~~li~~~l~~~p~~Rp~~~----~~l~~~~~ 257 (257)
T cd08223 229 ELGELIATMLSKRPEKRPSVK----SILRQPYI 257 (257)
T ss_pred HHHHHHHHHhccCcccCCCHH----HHhcCCCC
Confidence 589999999999999999987 99999998
No 146
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-47 Score=347.11 Aligned_cols=258 Identities=26% Similarity=0.438 Sum_probs=216.9
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
+-|.++.+||+|+||.||+|.++. +++.+|||.+..+ ..++++..|+.+|+++..|+||++|+.|.....
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~E-----sG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD 102 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRE-----SGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD 102 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhc-----cCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCc
Confidence 347788999999999999999998 6899999999765 345677789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+++|||||..|++.++++.+ .++|++.++..+++..+.||+|||...=||||||..|||++.+|+.||+|||.|-.+..
T Consensus 103 LWIVMEYCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD 181 (502)
T KOG0574|consen 103 LWIVMEYCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD 181 (502)
T ss_pred eEeehhhcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhh
Confidence 99999999999999988765 47899999999999999999999999999999999999999999999999999832211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.-
T Consensus 182 ------------------------------------------------------------------------------TM 183 (502)
T KOG0574|consen 182 ------------------------------------------------------------------------------TM 183 (502)
T ss_pred ------------------------------------------------------------------------------hH
Confidence 01
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
....+++|||.|||||++...+|+.++||||||++..||..|++||....+...+.-|-.. .|.. -..++.|. .
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~---PPPT-F~KPE~WS--~ 257 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTK---PPPT-FKKPEEWS--S 257 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCC---CCCC-CCChHhhh--h
Confidence 2346779999999999999999999999999999999999999999887665443333222 1111 11122222 2
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
++.|||++||.+.|++|-++. ++++|||.++-.
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~----~L~~H~FiknA~ 290 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTAL----RLCEHTFIKNAP 290 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHH----HHhhhhhhcCCC
Confidence 478999999999999999998 999999998653
No 147
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.1e-43 Score=340.58 Aligned_cols=256 Identities=26% Similarity=0.417 Sum_probs=214.6
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|.+.+.||+|+||.||+|.++. +++.|++|.+...... ......+..|+.+++.++||||+++++++.+.+..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 74 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKA-----DKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKL 74 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcC-----CCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEE
Confidence 58899999999999999999886 5688999998765433 23345677899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||++|++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++.+...
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 75 NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred EEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 99999999999999988765567999999999999999999999999999999999999999999999999987432210
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
. .
T Consensus 155 ~------------------------------------------------------------------------------~ 156 (256)
T cd08529 155 T------------------------------------------------------------------------------N 156 (256)
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
......|++.|+|||++.+..++.++|||||||++|||++|..||...+.......+..+.... .... ....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~ 228 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP--VSQM------YSQQ 228 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--Cccc------cCHH
Confidence 0122368899999999999889999999999999999999999999888777666666543221 1111 1235
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+.++|.+||+.+|++||++. ++++|||+
T Consensus 229 ~~~~i~~~l~~~p~~Rp~~~----~ll~~~~~ 256 (256)
T cd08529 229 LAQLIDQCLTKDYRQRPDTF----QLLRNPSL 256 (256)
T ss_pred HHHHHHHHccCCcccCcCHH----HHhhCCCC
Confidence 89999999999999999998 99999985
No 148
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.8e-45 Score=378.31 Aligned_cols=259 Identities=24% Similarity=0.350 Sum_probs=219.6
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
.+...+.+..+.||+|.||+||+|+..+.........||||.++..... +...+|.+|+++|..++|||||+|+|+|.
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~--~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN--QARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH--HHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 4567788999999999999999999998877778899999999876544 35567888999999999999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCC--------C----CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQP--------G----KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED 227 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~--------~----~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~ 227 (489)
.++.+|||+|||..|||.++|.-.. + ..|+..+.+.|+.||+.||+||-++.+|||||..+|+||+++
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 9999999999999999999987542 1 238888999999999999999999999999999999999999
Q ss_pred CcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCC
Q 011302 228 GHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHH 307 (489)
Q Consensus 228 ~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (489)
..|||+|||+++..... +.|+
T Consensus 640 l~VKIsDfGLsRdiYss-------------DYYk---------------------------------------------- 660 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSS-------------DYYK---------------------------------------------- 660 (774)
T ss_pred eEEEecccccchhhhhh-------------hhhc----------------------------------------------
Confidence 99999999998543210 0000
Q ss_pred CccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCC
Q 011302 308 DQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPL 386 (489)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 386 (489)
......-...|||||.|...+|+.++|||||||+|||+++ |..||.+..+.++++.|..+..
T Consensus 661 -----------------~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l 723 (774)
T KOG1026|consen 661 -----------------VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL 723 (774)
T ss_pred -----------------ccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc
Confidence 0001123458999999999999999999999999999996 9999999999999999998876
Q ss_pred CCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 387 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 387 ~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
++..... + .++.+||..||+.+|.+||++.
T Consensus 724 -L~~Pe~C-P------~~vY~LM~~CW~~~P~~RPsF~ 753 (774)
T KOG1026|consen 724 -LSCPENC-P------TEVYSLMLECWNENPKRRPSFK 753 (774)
T ss_pred -ccCCCCC-C------HHHHHHHHHHhhcCcccCCCHH
Confidence 4333222 1 2489999999999999999996
No 149
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.1e-43 Score=342.62 Aligned_cols=262 Identities=26% Similarity=0.376 Sum_probs=210.2
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHH---HHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA---LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
+|++.+.||+|+||+||+|... ++..+|+|.+.... .........+.+|+.+++.++|+||+++++++.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN------QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc------CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC
Confidence 5788999999999999999864 35789999886431 22234456688899999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
+..|+||||++|++|.+++.+. ..+++..+..++.|++.||+|||+.+|+|+||||+||+++.++.++|+|||++...
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 9999999999999999998765 46889999999999999999999999999999999999999999999999987432
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
...... ..
T Consensus 153 ~~~~~~------------------------------------------------------------------------~~ 160 (265)
T cd06631 153 AWVGLH------------------------------------------------------------------------GT 160 (265)
T ss_pred hhcccc------------------------------------------------------------------------cc
Confidence 110000 00
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
.........|+..|+|||++.+..++.++|||||||++|+|++|..||...+.......+.......+......
T Consensus 161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 234 (265)
T cd06631 161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSF------ 234 (265)
T ss_pred ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCC------
Confidence 00111234689999999999998899999999999999999999999988766555444443322222222211
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
...+.+||.+||..+|++||++. ++++||||
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~----~~l~~~~~ 265 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSAL----QLLRHDFL 265 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHH----HHhcCCCC
Confidence 22489999999999999999987 99999998
No 150
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-45 Score=364.08 Aligned_cols=253 Identities=28% Similarity=0.393 Sum_probs=217.4
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
.|.-++.||.|+||.||.|++.. +...||||.+.-..-....+...+..|+..|+.+.|||+|.+.|+|-.+...
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~-----n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~Ta 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVR-----NSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTA 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccC-----ccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchH
Confidence 47778899999999999999987 6789999999766555567788899999999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
+|||||| -|+-.|++.-.. +++.+.++..|+.+.+.||+|||+.+.||||||..|||+++.|.|||+|||.|...
T Consensus 102 WLVMEYC-lGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~--- 176 (948)
T KOG0577|consen 102 WLVMEYC-LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM--- 176 (948)
T ss_pred HHHHHHH-hccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc---
Confidence 9999999 677777776543 67999999999999999999999999999999999999999999999999987322
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
.
T Consensus 177 -------------------------------------------------------------------------------~ 177 (948)
T KOG0577|consen 177 -------------------------------------------------------------------------------A 177 (948)
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred CCccccCCCCccCcchhcC---CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 325 RSKSFVGTHEYLAPEVISG---QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
...+|+|||+|||||+|.. ..|+-++||||||+++.||.-.++|+...+....+..|..+.. |. ....+|..
T Consensus 178 PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNes--Pt---Lqs~eWS~ 252 (948)
T KOG0577|consen 178 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PT---LQSNEWSD 252 (948)
T ss_pred chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCC--CC---CCCchhHH
Confidence 2467899999999999864 3489999999999999999999999999998888888866422 11 11223322
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
.++.||..||.+-|.+||+.. ++++|+|..
T Consensus 253 --~F~~Fvd~CLqKipqeRptse----~ll~H~fv~ 282 (948)
T KOG0577|consen 253 --YFRNFVDSCLQKIPQERPTSE----ELLKHRFVL 282 (948)
T ss_pred --HHHHHHHHHHhhCcccCCcHH----HHhhcchhc
Confidence 378999999999999999997 999999974
No 151
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.2e-44 Score=348.63 Aligned_cols=262 Identities=27% Similarity=0.437 Sum_probs=213.8
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++++.||.|+||.||+|.+.. ++..||+|++..... .....+..|+.+++.++||||+++++++..+.
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKE-----TGLFAAAKIIQIESE---EELEDFMVEIDILSECKHPNIVGLYEAYFYEN 75 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcC-----CCcEEEEEEEeeCCH---HHHHHHHHHHHHHHhCCCCceeEEEEEEecCC
Confidence 3679999999999999999999876 467899999865422 23456777999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+++++|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 76 KLWILIEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNK 154 (280)
T ss_pred eEEEEeeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhc
Confidence 999999999999999988764 2569999999999999999999999999999999999999999999999999873211
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 155 ~~------------------------------------------------------------------------------ 156 (280)
T cd06611 155 ST------------------------------------------------------------------------------ 156 (280)
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCccccCCCCccCcchhc-----CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCch
Q 011302 323 NARSKSFVGTHEYLAPEVIS-----GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
........||+.|+|||++. ...++.++|||||||++|||++|..||.+.+....+.++..............
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 234 (280)
T cd06611 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKW-- 234 (280)
T ss_pred ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccC--
Confidence 00112346899999999985 34467899999999999999999999998877776666655432111111111
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCc
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 441 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~ 441 (489)
...+.+||.+||..+|.+||++. ++++||||....+
T Consensus 235 ----~~~~~~li~~~l~~~p~~Rps~~----~il~~~~~~~~~~ 270 (280)
T cd06611 235 ----SSSFNDFLKSCLVKDPDDRPTAA----ELLKHPFVSDQSD 270 (280)
T ss_pred ----CHHHHHHHHHHhccChhhCcCHH----HHhcChhhcccch
Confidence 12488999999999999999987 9999999988643
No 152
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.2e-43 Score=341.35 Aligned_cols=265 Identities=42% Similarity=0.721 Sum_probs=219.8
Q ss_pred eccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeec
Q 011302 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (489)
Q Consensus 92 lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 171 (489)
||.|+||.||+|++.. +++.|++|++.............+.+|..+++.++||||+++++.+..+...|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKS-----TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECC-----CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecC
Confidence 6899999999999886 46889999998776655566677888999999999999999999999999999999999
Q ss_pred CCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCc
Q 011302 172 PGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPK 251 (489)
Q Consensus 172 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 251 (489)
+|++|.+++.+. ..+++..+..++.||+.||+|||++|++||||+|+||+++.++.++|+|||++..........
T Consensus 76 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--- 150 (265)
T cd05579 76 PGGDLASLLENV--GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQIN--- 150 (265)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccc---
Confidence 999999998775 478999999999999999999999999999999999999999999999999974321100000
Q ss_pred chhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccC
Q 011302 252 LSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVG 331 (489)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 331 (489)
............+
T Consensus 151 -------------------------------------------------------------------~~~~~~~~~~~~~ 163 (265)
T cd05579 151 -------------------------------------------------------------------LNDDEKEDKRIVG 163 (265)
T ss_pred -------------------------------------------------------------------cccccccccCccc
Confidence 0000011233468
Q ss_pred CCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHH
Q 011302 332 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISK 411 (489)
Q Consensus 332 t~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~ 411 (489)
+..|+|||.+.+..++.++|||||||++|+|++|..||........+..+..+...++.... ....+.+||.+
T Consensus 164 ~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~ 236 (265)
T cd05579 164 TPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVE-------VSDEAIDLISK 236 (265)
T ss_pred CccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCcccc-------CCHHHHHHHHH
Confidence 88999999999888999999999999999999999999988888777777765555443321 12358999999
Q ss_pred HhhcCcccccCCCCChHHHHcCCCcCCCCc
Q 011302 412 LLVKNPKKRIGSLKGSVEIKRHEFFKGINW 441 (489)
Q Consensus 412 ~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~ 441 (489)
||+.+|.+||++ ..+.++++||||+.++|
T Consensus 237 ~l~~~p~~Rpt~-~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 237 LLVPDPEKRLGA-KSIEEIKNHPFFKGIDW 265 (265)
T ss_pred HhcCCHhhcCCC-ccHHHHhcCccccCCCC
Confidence 999999999998 24449999999999998
No 153
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.1e-44 Score=365.27 Aligned_cols=261 Identities=18% Similarity=0.234 Sum_probs=205.4
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 157 (489)
|.+..++|++.+.||+|+||.||+|++...........||||++...... .....+.+|+.+++.+ +|+|||+++++
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~~h~nIv~~~~~ 110 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT--DEREALMSELKILSHLGQHKNIVNLLGA 110 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH--HHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence 44566789999999999999999999765433345668999999754322 2345677899999999 89999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCC-----------------------------------------------------
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQP----------------------------------------------------- 184 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~----------------------------------------------------- 184 (489)
+...+.+|+|||||++|+|.+++....
T Consensus 111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 999999999999999999999886421
Q ss_pred ---------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 185 ---------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 185 ---------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
..++++.++..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~--- 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN--- 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc---
Confidence 12478888999999999999999999999999999999999999999999999843211000
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
.......
T Consensus 268 -------------------------------------------------------------------------~~~~~~~ 274 (374)
T cd05106 268 -------------------------------------------------------------------------YVVKGNA 274 (374)
T ss_pred -------------------------------------------------------------------------eeeccCC
Confidence 0001122
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.+++.|||||++.+..++.++|||||||++|||++ |..||........+..+.......+.... .+.++.+|
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~l 347 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDF-------APPEIYSI 347 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCC-------CCHHHHHH
Confidence 35678999999998889999999999999999997 99999887655544454443322221111 11358999
Q ss_pred HHHHhhcCcccccCCC
Q 011302 409 ISKLLVKNPKKRIGSL 424 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~ 424 (489)
|.+||+.||++||++.
T Consensus 348 i~~cl~~dp~~RPs~~ 363 (374)
T cd05106 348 MKMCWNLEPTERPTFS 363 (374)
T ss_pred HHHHcCCChhhCcCHH
Confidence 9999999999999997
No 154
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-44 Score=348.86 Aligned_cols=240 Identities=15% Similarity=0.165 Sum_probs=199.1
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec----CceEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA----SHYSC 165 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~ 165 (489)
..||+|++|.||+|.+. ++.||||++.............+.+|+.+|++++||||+++++++.+ ...+|
T Consensus 26 ~~i~~g~~~~v~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN-------NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLS 98 (283)
T ss_pred eEEeeCCceEEEEEEEC-------CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceE
Confidence 57999999999999875 46899999987654444445677889999999999999999999876 45789
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
+||||++||+|.+++... ..+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++.+..
T Consensus 99 lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~- 175 (283)
T PHA02988 99 LILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSS- 175 (283)
T ss_pred EEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcc-
Confidence 999999999999998765 568899999999999999999998 4999999999999999999999999999743210
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
T Consensus 176 -------------------------------------------------------------------------------- 175 (283)
T PHA02988 176 -------------------------------------------------------------------------------- 175 (283)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccCCCCccCcchhcC--CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHH
Q 011302 325 RSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~ 402 (489)
.....+||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.+..+....+......++... .. +
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~------~ 248 (283)
T PHA02988 176 PPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPL-DC------P 248 (283)
T ss_pred ccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCC-cC------c
Confidence 0012358899999999976 6789999999999999999999999999888777777765443333211 11 1
Q ss_pred hhHHHHHHHHhhcCcccccCCCCC
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKG 426 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~ 426 (489)
..+++||.+||+.||++||++.+.
T Consensus 249 ~~l~~li~~cl~~dp~~Rps~~el 272 (283)
T PHA02988 249 LEIKCIVEACTSHDSIKRPNIKEI 272 (283)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHH
Confidence 258999999999999999999733
No 155
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.8e-44 Score=345.87 Aligned_cols=256 Identities=28% Similarity=0.408 Sum_probs=204.9
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeec-
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA- 160 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~- 160 (489)
.+.|++.+.||+|+||+||+|.+.. .++.||+|++..... ....+..|+.+++.+ +||||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~aik~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVK-----TGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKK 75 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcC-----CCcEEEEEEEEcCCc----cHHHHHHHHHHHHHhcCCCCeeeEeeEEeec
Confidence 3678999999999999999999886 578899999875421 123456688888888 69999999999864
Q ss_pred -----CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 161 -----SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 161 -----~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
...+|+||||+++|+|.+++.......+++..+..++.|++.||+|||+++|+||||||+||+++.++.+||+||
T Consensus 76 ~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 76 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccC
Confidence 246899999999999999988765567999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+++.....
T Consensus 156 g~~~~~~~~----------------------------------------------------------------------- 164 (272)
T cd06637 156 GVSAQLDRT----------------------------------------------------------------------- 164 (272)
T ss_pred CCceecccc-----------------------------------------------------------------------
Confidence 997432110
Q ss_pred cccccccccCCccccCCCCccCcchhcC-----CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 390 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~ 390 (489)
........|++.|+|||++.+ ..++.++|||||||++|||++|..||...........+.........
T Consensus 165 -------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 237 (272)
T cd06637 165 -------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLK 237 (272)
T ss_pred -------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCC
Confidence 001223468999999999863 35788999999999999999999999876655444444332211111
Q ss_pred CCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 391 IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 391 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.. . ....+.+||.+||..||.+||++. +++.||||
T Consensus 238 ~~-~------~~~~~~~li~~~l~~~p~~Rpt~~----~il~~~~~ 272 (272)
T cd06637 238 SK-K------WSKKFQSFIESCLVKNHSQRPTTE----QLMKHPFI 272 (272)
T ss_pred CC-C------cCHHHHHHHHHHcCCChhhCCCHH----HHhhCCCC
Confidence 00 1 112589999999999999999987 99999998
No 156
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.6e-44 Score=363.02 Aligned_cols=261 Identities=18% Similarity=0.243 Sum_probs=203.9
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 157 (489)
+.+..++|++.+.||+|+||.||+|++.......+...||+|+++..... .....+.+|+.+|+.+ +||||++++++
T Consensus 30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~il~~l~~HpnIv~l~~~ 107 (375)
T cd05104 30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL--TEREALMSELKVLSYLGNHINIVNLLGA 107 (375)
T ss_pred cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc--HHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence 34556789999999999999999998654322335678999999754322 2334677899999999 89999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCC-----------------------------------------------------
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQP----------------------------------------------------- 184 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~----------------------------------------------------- 184 (489)
+.++...|+|||||+||+|.+++....
T Consensus 108 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
T cd05104 108 CTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR 187 (375)
T ss_pred eccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence 999999999999999999998886431
Q ss_pred --------------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 185 --------------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 185 --------------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 124778889999999999999999999999999999999999999999999998432110
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
.. ..
T Consensus 268 ~~----------------------------------------------------------------------------~~ 271 (375)
T cd05104 268 SN----------------------------------------------------------------------------YV 271 (375)
T ss_pred cc----------------------------------------------------------------------------cc
Confidence 00 00
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
......++..|+|||++.+..++.++|||||||++|||++ |..||.+......+.++........... .. +.
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~ 344 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPE-CA------PS 344 (375)
T ss_pred ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCC-CC------CH
Confidence 0112235678999999999999999999999999999997 9999988765554444444332221111 11 12
Q ss_pred hHHHHHHHHhhcCcccccCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~ 424 (489)
++.+||.+||..||++||++.
T Consensus 345 ~l~~li~~cl~~dP~~RPs~~ 365 (375)
T cd05104 345 EMYDIMKSCWDADPLKRPTFK 365 (375)
T ss_pred HHHHHHHHHccCChhHCcCHH
Confidence 589999999999999999997
No 157
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.3e-44 Score=350.52 Aligned_cols=254 Identities=27% Similarity=0.411 Sum_probs=203.9
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||.||+|.+.. +++.||+|++..+.. ......+.+|+.+++.++||||+++++++...+.
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 73 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLL-----TRRILAVKVIPLDIT--VELQKQIMSELEILYKCDSPYIIGFYGAFFVENR 73 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcC-----CCcEEEEEEEecCCC--hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCE
Confidence 478899999999999999999876 578899999875421 1233457789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.++||||+++++|..+ ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.....
T Consensus 74 ~~lv~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~ 147 (279)
T cd06619 74 ISICTEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN 147 (279)
T ss_pred EEEEEecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence 9999999999999543 2478888999999999999999999999999999999999999999999999732210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
T Consensus 148 -------------------------------------------------------------------------------- 147 (279)
T cd06619 148 -------------------------------------------------------------------------------- 147 (279)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH-------HHHHHHhcCCCCCCCCCCCCc
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE-------KTLINILKKPLTFPRIGVSSS 396 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-------~~~~~i~~~~~~~p~~~~~~~ 396 (489)
......+||..|+|||++.+..++.++|||||||++|+|++|..||...... .....+..... +.....
T Consensus 148 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-- 223 (279)
T cd06619 148 SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP--PVLPVG-- 223 (279)
T ss_pred ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC--CCCCCC--
Confidence 0112347899999999999988999999999999999999999999653221 22222222111 111000
Q ss_pred hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCc
Q 011302 397 KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 441 (489)
Q Consensus 397 ~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~ 441 (489)
....++.+||.+||..||++||++. +++.||||...+-
T Consensus 224 ---~~~~~~~~li~~~l~~~P~~Rp~~~----eil~~~~~~~~~~ 261 (279)
T cd06619 224 ---QFSEKFVHFITQCMRKQPKERPAPE----NLMDHPFIVQYND 261 (279)
T ss_pred ---cCCHHHHHHHHHHhhCChhhCCCHH----HHhcCcccccccC
Confidence 1123589999999999999999987 9999999987654
No 158
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7.6e-44 Score=347.47 Aligned_cols=263 Identities=27% Similarity=0.372 Sum_probs=203.5
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++++.||+|+||.||+|+++. ++..||||.+...... ......+..|+.+++.++||||+++++++.+++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 74 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKK-----TGQIVAMKKIRLESEE-EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRL 74 (285)
T ss_pred CceEeeEecccCceEEEEEEECC-----CCcEEEEEEecccccc-CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeE
Confidence 58899999999999999999876 4678999998654221 12234566799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCC-CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 165 CLVMEYCPGGDLYAARQRQP-GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
|+||||++ ++|.+++.... +..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..+..
T Consensus 75 ~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 153 (285)
T cd07861 75 YLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI 153 (285)
T ss_pred EEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCC
Confidence 99999996 68888876543 35789999999999999999999999999999999999999999999999999732210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 154 ~------------------------------------------------------------------------------~ 155 (285)
T cd07861 154 P------------------------------------------------------------------------------V 155 (285)
T ss_pred C------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC-----C---------
Q 011302 324 ARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT-----F--------- 388 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-----~--------- 388 (489)
.......|++.|+|||++.+. .++.++|||||||++|||++|++||.+.+.......+...... +
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 001122578899999998764 4788999999999999999999999887665444333211000 0
Q ss_pred ----CCCCCCC--chhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 389 ----PRIGVSS--SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 389 ----p~~~~~~--~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+...... ......+.++.+||.+||+.||.+||++. +|+.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~----~ll~~~~~ 285 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAK----KALNHPYF 285 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHH----HHhcCCCC
Confidence 0000000 00001223578999999999999999987 99999998
No 159
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.4e-44 Score=373.38 Aligned_cols=277 Identities=22% Similarity=0.330 Sum_probs=199.2
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEE--------------eeehHHHHHHHHHHHHHHHHHHHHhCC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMK--------------VVDREALAIRKKLHRADMEKVILTMLD 147 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK--------------~~~~~~~~~~~~~~~~~~E~~~l~~l~ 147 (489)
..++|++++.||+|+||+||+|..+... ...+++| ++.+...........+.+|+.+|+.++
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~ 221 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRAST----EEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN 221 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccc----hhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999999876421 1111111 111111112233456778999999999
Q ss_pred CCCcccccceeecCceEEEEEeecCCCchHHHHHhCC---CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEe
Q 011302 148 HPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQP---GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLV 224 (489)
Q Consensus 148 hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl 224 (489)
|||||++++++.+.+..|+|||++ +++|..++.... ........++.|+.||+.||+|||++|||||||||+||||
T Consensus 222 HpnIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl 300 (501)
T PHA03210 222 HENILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL 300 (501)
T ss_pred CCCcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 999999999999999999999999 677877765421 1233456788899999999999999999999999999999
Q ss_pred ccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCC
Q 011302 225 REDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDG 304 (489)
Q Consensus 225 ~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (489)
+.+|.+||+|||+++.+...
T Consensus 301 ~~~~~vkL~DFGla~~~~~~------------------------------------------------------------ 320 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKE------------------------------------------------------------ 320 (501)
T ss_pred CCCCCEEEEeCCCceecCcc------------------------------------------------------------
Confidence 99999999999998433110
Q ss_pred CCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCC-CCC--CcHHHHHHH
Q 011302 305 DHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF-KGE--NNEKTLINI 381 (489)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf-~~~--~~~~~~~~i 381 (489)
........+||+.|+|||++.+..++.++|||||||++|||++|..++ .+. .....+.++
T Consensus 321 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 321 -----------------REAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred -----------------cccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 001123457999999999999999999999999999999999987654 322 222333333
Q ss_pred hcC----CCCCCCCCC----------------CCchh---HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 382 LKK----PLTFPRIGV----------------SSSKE---FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 382 ~~~----~~~~p~~~~----------------~~~~~---~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
... ...+|.... ..... ......+.++|.+||.+||.+||++. |+|.||||..
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~----elL~hp~f~~ 459 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAA----ELLALPLFSA 459 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHH----HHhhChhhhc
Confidence 221 111121100 00000 01122467889999999999999998 9999999998
Q ss_pred CCcccc
Q 011302 439 INWALI 444 (489)
Q Consensus 439 ~~~~~~ 444 (489)
..+..+
T Consensus 460 ~~~~~~ 465 (501)
T PHA03210 460 EEEEEI 465 (501)
T ss_pred CCchHH
Confidence 776654
No 160
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.8e-43 Score=339.81 Aligned_cols=255 Identities=36% Similarity=0.660 Sum_probs=212.4
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++.+.||.|+||.||+|.+.. ++..||+|++.+...........+..|+.+++.++||||+++++++.++...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRD-----TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEcc-----CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeE
Confidence 58999999999999999999876 5678999999877655445667788899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+.|++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred EEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 9999999999999988765 57999999999999999999999999999999999999999999999999987322100
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
.
T Consensus 154 -------------------------------------------------------------------------------~ 154 (258)
T cd05578 154 -------------------------------------------------------------------------------T 154 (258)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCc--HHHHHHHhc-CCCCCCCCCCCCchhHHH
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN--EKTLINILK-KPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~~~~i~~-~~~~~p~~~~~~~~~~~~ 401 (489)
......|+..|+|||++.+..++.++|+|||||++|+|++|..||...+. ...+..... .....|.. .
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~------ 225 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPAT---W------ 225 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCccc---C------
Confidence 01123578899999999998899999999999999999999999988764 222223222 22222221 1
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
...+.++|.+||..||.+|+++. ++++++||||
T Consensus 226 ~~~~~~~i~~~l~~~p~~R~~~~--~~~l~~~~~~ 258 (258)
T cd05578 226 STEAIDAINKLLERDPQKRLGDN--LKDLKNHPYF 258 (258)
T ss_pred cHHHHHHHHHHccCChhHcCCcc--HHHHhcCCCC
Confidence 13589999999999999999992 3499999998
No 161
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-44 Score=353.70 Aligned_cols=261 Identities=30% Similarity=0.414 Sum_probs=208.3
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceee
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFE 159 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~ 159 (489)
+....|+++++||+||-++||++..-+ ...||+|.+..... ....+.-+..|+.+|.+|. |.+||+|+++-.
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~------~~iyalkkv~~~~~-D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv 430 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSD------KQIYALKKVVLLEA-DNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV 430 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCC------CcchhhhHHHHhhc-CHHHHHHHHHHHHHHHHhcCCceEEEEeeeec
Confidence 345679999999999999999998664 46778777754433 3456777888999999995 999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
.++.+||||||= ..||..+|++.... +..-.++.|..||+.|+.++|..||||.||||.|+|+- .|.+||+|||+|.
T Consensus 431 ~d~~lYmvmE~G-d~DL~kiL~k~~~~-~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~ 507 (677)
T KOG0596|consen 431 TDGYLYMVMECG-DIDLNKILKKKKSI-DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIAN 507 (677)
T ss_pred cCceEEEEeecc-cccHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhc
Confidence 999999999975 78999999876433 33238899999999999999999999999999999986 7899999999995
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.+..-..
T Consensus 508 aI~~DTT------------------------------------------------------------------------- 514 (677)
T KOG0596|consen 508 AIQPDTT------------------------------------------------------------------------- 514 (677)
T ss_pred ccCcccc-------------------------------------------------------------------------
Confidence 4332110
Q ss_pred cccccCCccccCCCCccCcchhcCCC-----------CCCcccHHHHHHHHHHHhhCCCCCCCCC-cHHHHHHHhcCC--
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQG-----------HGSAVDWWTLGVFLYEMLYGTTPFKGEN-NEKTLINILKKP-- 385 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~-----------~~~~~DiwSlGvil~elltG~~Pf~~~~-~~~~~~~i~~~~-- 385 (489)
+-...+-+||+.||+||.+.... .+.++||||||||||+|+.|++||.... ...-+..|....
T Consensus 515 ---sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~ 591 (677)
T KOG0596|consen 515 ---SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHE 591 (677)
T ss_pred ---ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCcc
Confidence 11123448999999999996543 3578999999999999999999997654 344455555543
Q ss_pred CCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 386 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 386 ~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
++||...... ++.++++.||.+||.+||++- +||+|||+..+
T Consensus 592 Iefp~~~~~~--------~li~~mK~CL~rdPkkR~si~----eLLqhpFl~~~ 633 (677)
T KOG0596|consen 592 IEFPDIPEND--------ELIDVMKCCLARDPKKRWSIP----ELLQHPFLQIQ 633 (677)
T ss_pred ccccCCCCch--------HHHHHHHHHHhcCcccCCCcH----HHhcCcccccc
Confidence 3566544332 389999999999999999998 99999999874
No 162
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.7e-44 Score=343.50 Aligned_cols=258 Identities=27% Similarity=0.444 Sum_probs=207.5
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|.+.+.||+|+||.||+|++.. +++.||+|+++.... .....+.+|+.+++.++||||+++++++...
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~---~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~ 78 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVN-----TGELAAIKVIKLEPG---EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR 78 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcC-----CCcEEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC
Confidence 34689999999999999999999876 567899999875432 2233456799999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
+..|+||||+++++|.+++... +.+++.++..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..+
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd06645 79 DKLWICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQI 156 (267)
T ss_pred CEEEEEEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence 9999999999999999988765 57999999999999999999999999999999999999999999999999997332
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
...
T Consensus 157 ~~~----------------------------------------------------------------------------- 159 (267)
T cd06645 157 TAT----------------------------------------------------------------------------- 159 (267)
T ss_pred cCc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred cccCCccccCCCCccCcchhc---CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 322 INARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
........||+.|+|||++. ...++.++|||||||++|||++|..||...........+.......+..... .
T Consensus 160 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 235 (267)
T cd06645 160 -IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDK--M- 235 (267)
T ss_pred -ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccccc--C-
Confidence 00112346899999999985 4457889999999999999999999997766554444443333322221110 0
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 435 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~ 435 (489)
.....+.+||.+||..+|++||++. ++++|||
T Consensus 236 -~~~~~~~~li~~~l~~~P~~R~~~~----~ll~~~~ 267 (267)
T cd06645 236 -KWSNSFHHFVKMALTKNPKKRPTAE----KLLQHPF 267 (267)
T ss_pred -CCCHHHHHHHHHHccCCchhCcCHH----HHhcCCC
Confidence 0112488999999999999999987 9999998
No 163
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-44 Score=361.78 Aligned_cols=264 Identities=22% Similarity=0.322 Sum_probs=220.6
Q ss_pred HHhhcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccc
Q 011302 74 LRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPT 153 (489)
Q Consensus 74 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 153 (489)
+....|++..++..+.++||+|+||+||+|+.+...... ...||||..+.+....+....++.+|+++|+.++|||||+
T Consensus 147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~-~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr 225 (474)
T KOG0194|consen 147 IPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFK-VVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVR 225 (474)
T ss_pred ccccccEEeccCccccceeecccccEEEEEEEEecCCce-eeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 455667888899999999999999999999988643211 1228999998755555677889999999999999999999
Q ss_pred ccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEc
Q 011302 154 LYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 154 l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
+||+......+|||||+|.||+|.++|++.+ ..++..+...++.+.+.||+|||++++|||||..+|+|++.++.+||+
T Consensus 226 ~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKIS 304 (474)
T KOG0194|consen 226 FYGVAVLEEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKIS 304 (474)
T ss_pred EEEEEcCCCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeC
Confidence 9999999999999999999999999999875 369999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||+++.......
T Consensus 305 DFGLs~~~~~~~~------------------------------------------------------------------- 317 (474)
T KOG0194|consen 305 DFGLSRAGSQYVM------------------------------------------------------------------- 317 (474)
T ss_pred ccccccCCcceee-------------------------------------------------------------------
Confidence 9999843220000
Q ss_pred CccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIG 392 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~ 392 (489)
......-...|+|||.+....|+.++|||||||++||+++ |..||.+....++..+|....+..+...
T Consensus 318 -----------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~ 386 (474)
T KOG0194|consen 318 -----------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPS 386 (474)
T ss_pred -----------ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCC
Confidence 0000012357999999999999999999999999999998 8999999999999999966555544332
Q ss_pred CCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 393 VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 393 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.. +..+..++.+||..||++|+++.
T Consensus 387 ~~-------p~~~~~~~~~c~~~~p~~R~tm~ 411 (474)
T KOG0194|consen 387 KT-------PKELAKVMKQCWKKDPEDRPTMS 411 (474)
T ss_pred CC-------HHHHHHHHHHhccCChhhccCHH
Confidence 11 12488999999999999999986
No 164
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-43 Score=346.04 Aligned_cols=258 Identities=24% Similarity=0.398 Sum_probs=209.9
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
..+|++.+.||+|+||.||+|.+.. .++.||+|.+...... ....+.+|+.+++.++||||+++++.+..+.
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~ 90 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVA-----TGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGD 90 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECC-----CCcEEEEEEEecCCcc---hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence 4689999999999999999999876 5678999998754332 2345667999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||++|++|.+++.. ..+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 91 ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred EEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence 99999999999999998865 358899999999999999999999999999999999999999999999999873221
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 168 ~~------------------------------------------------------------------------------ 169 (296)
T cd06654 168 PE------------------------------------------------------------------------------ 169 (296)
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~ 402 (489)
........|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+..... +..... . ...
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~--~--~~~ 243 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT--PELQNP--E--KLS 243 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC--CCCCCc--c--ccC
Confidence 0011223688999999999988889999999999999999999999988776544443332211 111000 0 112
Q ss_pred hhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
..+.+||.+||..||++||++. ++++||||...
T Consensus 244 ~~l~~li~~~l~~~p~~Rpt~~----eil~~~~~~~~ 276 (296)
T cd06654 244 AIFRDFLNRCLDMDVEKRGSAK----ELLQHQFLKIA 276 (296)
T ss_pred HHHHHHHHHHCcCCcccCcCHH----HHhhChhhhcc
Confidence 3588999999999999999987 99999999764
No 165
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.3e-43 Score=343.76 Aligned_cols=257 Identities=28% Similarity=0.425 Sum_probs=205.3
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceee-
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE- 159 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~- 159 (489)
..+.|++.+.||.|+||.||+|++.. .++.||+|++..... ....+..|+.+++++ +||||+++++++.
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVK-----TGQLAAIKVMDVTED----EEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcC-----CCcEEEEEEEecChH----HHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 45789999999999999999999876 567899999875432 223456688888888 6999999999884
Q ss_pred -----cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcc
Q 011302 160 -----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSD 234 (489)
Q Consensus 160 -----~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~D 234 (489)
....+|+||||+++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEee
Confidence 356889999999999999998876556788888999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCC
Q 011302 235 FDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDD 314 (489)
Q Consensus 235 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (489)
||++......
T Consensus 165 fg~~~~~~~~---------------------------------------------------------------------- 174 (282)
T cd06636 165 FGVSAQLDRT---------------------------------------------------------------------- 174 (282)
T ss_pred Ccchhhhhcc----------------------------------------------------------------------
Confidence 9997322100
Q ss_pred ccccccccccCCccccCCCCccCcchhc-----CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCC
Q 011302 315 PEVVAEPINARSKSFVGTHEYLAPEVIS-----GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP 389 (489)
Q Consensus 315 ~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p 389 (489)
........|++.|+|||++. +..++.++|||||||++|||++|..||...........+..... +
T Consensus 175 --------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~ 244 (282)
T cd06636 175 --------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP--P 244 (282)
T ss_pred --------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC--C
Confidence 00112346899999999986 34578899999999999999999999987665544443333211 1
Q ss_pred CCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 390 RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..... .....+.+||.+||..||.+||++. +|++||||
T Consensus 245 ~~~~~-----~~~~~~~~li~~cl~~~p~~Rp~~~----ell~~~~~ 282 (282)
T cd06636 245 KLKSK-----KWSKKFIDFIEGCLVKNYLSRPSTE----QLLKHPFI 282 (282)
T ss_pred CCccc-----ccCHHHHHHHHHHhCCChhhCcCHH----HHhcCCCC
Confidence 11100 1123589999999999999999987 99999998
No 166
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.9e-43 Score=337.87 Aligned_cols=261 Identities=27% Similarity=0.401 Sum_probs=210.1
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHH------HHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL------AIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
+|.+...||+|+||.||+|.+.. .++.||+|.+..... ........+.+|+.+++.++||||+++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 75 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNAS-----SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS 75 (267)
T ss_pred CccccceeecCCCeEEEEEEecC-----CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 36778899999999999999876 467899998864321 1223446678899999999999999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
...+..|+||||+++++|.+++... +.+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||++
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 76 LDADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred EeCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCC
Confidence 9999999999999999999998765 56899999999999999999999999999999999999999999999999998
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+.+.....
T Consensus 154 ~~~~~~~~------------------------------------------------------------------------ 161 (267)
T cd06628 154 KKLEANSL------------------------------------------------------------------------ 161 (267)
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 43321000
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
............|+..|+|||.+.+..++.++|||||||++|+|++|..||.+.+....+.++.... .+......
T Consensus 162 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~--- 236 (267)
T cd06628 162 STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA--SPEIPSNI--- 236 (267)
T ss_pred cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC--CCcCCccc---
Confidence 0000001123468899999999998889999999999999999999999998877665555544421 11111111
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
...+.+||.+||+.||.+||++. ++++||||
T Consensus 237 ---~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~ 267 (267)
T cd06628 237 ---SSEAIDFLEKTFEIDHNKRPTAA----ELLKHPFL 267 (267)
T ss_pred ---CHHHHHHHHHHccCCchhCcCHH----HHhhCCCC
Confidence 12589999999999999999987 99999998
No 167
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.6e-43 Score=342.53 Aligned_cols=259 Identities=29% Similarity=0.422 Sum_probs=208.9
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
-|++.+.||+|+||.||+|.+.. ++..+++|.+..... .....+.+|+.+++.++||||+++++++...+..
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~-----~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~ 77 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKE-----TGVLAAAKVIDTKSE---EELEDYMVEIDILASCDHPNIVKLLDAFYYENNL 77 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECC-----CCeEEEEEEeCCCCH---HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEE
Confidence 46888999999999999999886 567889999864322 2344567799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+++++|..++... ...+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 78 ~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 156 (282)
T cd06643 78 WILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 156 (282)
T ss_pred EEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc
Confidence 9999999999998877653 256899999999999999999999999999999999999999999999999997332100
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 157 ------------------------------------------------------------------------------~~ 158 (282)
T cd06643 157 ------------------------------------------------------------------------------IQ 158 (282)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred CCccccCCCCccCcchhc-----CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 325 RSKSFVGTHEYLAPEVIS-----GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
......||+.|+|||++. +..++.++|||||||++|||++|.+||...+..+....+.............
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 233 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSR----- 233 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccc-----
Confidence 112346899999999984 3457789999999999999999999999887766666655432211110111
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
....+.+||.+||+.||++||++. ++++||||+...
T Consensus 234 -~~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~~ 269 (282)
T cd06643 234 -WSSEFKDFLKKCLEKNVDARWTTT----QLLQHPFVTVNS 269 (282)
T ss_pred -cCHHHHHHHHHHccCChhhCcCHH----HHhcCCCEeccC
Confidence 112589999999999999999987 999999997643
No 168
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2e-43 Score=344.31 Aligned_cols=263 Identities=24% Similarity=0.337 Sum_probs=211.4
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|++.+.||+|+||.||+|.+...........||+|.+..... ......+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE--PKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC--HHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 34578999999999999999999987654334557899999874422 2334567789999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCC--------------CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPG--------------KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE 226 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~ 226 (489)
.+..|++|||+++|+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 9999999999999999999876421 45788889999999999999999999999999999999999
Q ss_pred CCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCC
Q 011302 227 DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDH 306 (489)
Q Consensus 227 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (489)
++.+||+|||+++......
T Consensus 160 ~~~~~L~dfg~~~~~~~~~------------------------------------------------------------- 178 (283)
T cd05048 160 GLTVKISDFGLSRDIYSAD------------------------------------------------------------- 178 (283)
T ss_pred CCcEEECCCcceeeccccc-------------------------------------------------------------
Confidence 9999999999974321000
Q ss_pred CCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCC
Q 011302 307 HDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKP 385 (489)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~ 385 (489)
.........+++.|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+..+.
T Consensus 179 ---------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~ 243 (283)
T cd05048 179 ---------------YYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQ 243 (283)
T ss_pred ---------------cccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 0001122357889999999998889999999999999999998 999999988877777666543
Q ss_pred CCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 386 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 386 ~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
... ..... +..+.+|+.+||+.||.+||++. +|+++
T Consensus 244 ~~~--~~~~~------~~~~~~l~~~c~~~~p~~Rp~~~----~i~~~ 279 (283)
T cd05048 244 LLP--CPEDC------PARVYALMIECWNEIPARRPRFK----DIHTR 279 (283)
T ss_pred cCC--CcccC------CHHHHHHHHHHccCChhhCcCHH----HHHHH
Confidence 221 11111 13589999999999999999997 66654
No 169
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.2e-43 Score=335.85 Aligned_cols=254 Identities=29% Similarity=0.466 Sum_probs=209.7
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|..+. .++.|++|.+..... ...+.+|+.+++.++||||+++++++.+...
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~ 72 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKE-----TGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNTD 72 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcC-----CCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCc
Confidence 689999999999999999999886 467899999976532 4567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||+++++|.+++... ...+++..+..++.|++.||.|||+.+|+||||+|+||+++.++.+||+|||++.....
T Consensus 73 ~~l~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 73 LWIVMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred EEEEEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 99999999999999988654 25789999999999999999999999999999999999999999999999999743211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 152 ~------------------------------------------------------------------------------~ 153 (256)
T cd06612 152 T------------------------------------------------------------------------------M 153 (256)
T ss_pred C------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.......|+..|+|||++.+..++.++|||||||++|+|++|..||...+.......+...... ..... .....
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~ 227 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP--TLSDP----EKWSP 227 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC--CCCch----hhcCH
Confidence 0112235788999999999998999999999999999999999999887665544443322111 10000 01123
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.+.+||.+||+.||++||++. ++++||||
T Consensus 228 ~~~~~i~~~l~~~P~~Rps~~----~il~~~~~ 256 (256)
T cd06612 228 EFNDFVKKCLVKDPEERPSAI----QLLQHPFI 256 (256)
T ss_pred HHHHHHHHHHhcChhhCcCHH----HHhcCCCC
Confidence 589999999999999999997 99999998
No 170
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.5e-43 Score=344.50 Aligned_cols=257 Identities=25% Similarity=0.383 Sum_probs=211.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
.+|++.+.||.|+||.||+|.+.. .++.||+|.+...... ....+.+|+.+++.++||||+++++++..++.
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 90 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVA-----TGQEVAIKQINLQKQP---KKELIINEILVMKELKNPNIVNFLDSFLVGDE 90 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcC-----CCcEEEEEEEecccCc---hHHHHHHHHHHHHhcCCCceeeeeeeEecCce
Confidence 579999999999999999999876 5788999998654322 23456779999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||+++++|..++.. ..+++.++..++.|++.||+|||++|++||||||+||+++.++.+||+|||++.....
T Consensus 91 ~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 91 LFVVMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EEEEEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 9999999999999998865 3589999999999999999999999999999999999999999999999998732210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 168 ~------------------------------------------------------------------------------~ 169 (296)
T cd06655 168 E------------------------------------------------------------------------------Q 169 (296)
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+.......+............ ....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 243 (296)
T cd06655 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPE------KLSP 243 (296)
T ss_pred ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcc------cCCH
Confidence 0112236889999999999888999999999999999999999999988776555554432211111111 1122
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
.+.+||.+||..||++||++. +++.||||+..
T Consensus 244 ~~~~li~~~l~~dp~~Rpt~~----~il~~~~~~~~ 275 (296)
T cd06655 244 IFRDFLNRCLEMDVEKRGSAK----ELLQHPFLKLA 275 (296)
T ss_pred HHHHHHHHHhhcChhhCCCHH----HHhhChHhhhc
Confidence 588999999999999999987 99999999764
No 171
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.1e-45 Score=335.36 Aligned_cols=274 Identities=27% Similarity=0.360 Sum_probs=207.9
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec-Cc
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA-SH 162 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~ 162 (489)
..|.++..||+|+||.||+|...++.. .-.+.||||.++.+... ......+-+|+.+++.++||||+.|..+|-. +.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~-kr~k~yAiKkfk~~kd~-tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTND-KRTKEYAIKKFKGEKDG-TGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCc-ccchhhHHHHHhccCCC-CCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 579999999999999999997665431 12458999999765221 1223345679999999999999999999977 88
Q ss_pred eEEEEEeecCCCchHHHHHhC---CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC----CcEEEccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQ---PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED----GHIMLSDF 235 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~----~~vkl~DF 235 (489)
.++|++||++ -+|+.+++.+ ..+.++...++.|+.||+.|+.|||++.|+||||||.|||+..+ |.|||+||
T Consensus 102 ~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 9999999995 5888877653 23568888999999999999999999999999999999999977 99999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+|+.+...-.-+
T Consensus 181 GlaR~~~~plkpl------------------------------------------------------------------- 193 (438)
T KOG0666|consen 181 GLARLFNNPLKPL------------------------------------------------------------------- 193 (438)
T ss_pred cHHHHhhcccccc-------------------------------------------------------------------
Confidence 9997764311000
Q ss_pred cccccccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCc---------HHHHHHHhc--
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN---------EKTLINILK-- 383 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~---------~~~~~~i~~-- 383 (489)
.....++-|.+|+|||.+.|.. |+.++||||+|||+.||++-++.|.+... .+++.+|.+
T Consensus 194 --------~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vL 265 (438)
T KOG0666|consen 194 --------ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVL 265 (438)
T ss_pred --------ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHc
Confidence 0122346799999999999976 79999999999999999999999987531 234444432
Q ss_pred -CC--CCCCCCCCCC------------------chhHH-----HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcC
Q 011302 384 -KP--LTFPRIGVSS------------------SKEFE-----EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 384 -~~--~~~p~~~~~~------------------~~~~~-----~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
.+ -.+|...... ...|. .++.+.+|+.+||..||.+|+++. ++++|+||.
T Consensus 266 G~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~----qAleh~yF~ 341 (438)
T KOG0666|consen 266 GTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAE----QALEHPYFT 341 (438)
T ss_pred CCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHH----HHhcccccc
Confidence 11 1122111000 00000 112367999999999999999998 999999997
Q ss_pred CC
Q 011302 438 GI 439 (489)
Q Consensus 438 ~~ 439 (489)
.-
T Consensus 342 ~d 343 (438)
T KOG0666|consen 342 ED 343 (438)
T ss_pred cC
Confidence 64
No 172
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.2e-43 Score=339.26 Aligned_cols=253 Identities=19% Similarity=0.213 Sum_probs=203.6
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|++.+.||+|+||.||+|.++... .....||+|.++..... .....+.+|+.+++.++||||+++++++..+
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vaik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 78 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPS--KRELPVAIHTLRAGCSD--KQRRGFLAEALTLGQFDHSNIVRLEGVITRG 78 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCC--CceeeEEEEecCCCCCH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEecC
Confidence 4568999999999999999999876422 24678999998754221 2234677899999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
+..|+||||+++|+|.+++.... ..+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||.+...
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 99999999999999999887643 57899999999999999999999999999999999999999999999999986221
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
....
T Consensus 158 ~~~~---------------------------------------------------------------------------- 161 (266)
T cd05064 158 KSEA---------------------------------------------------------------------------- 161 (266)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 0000
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+..+. ..|... ..
T Consensus 162 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~-~~----- 233 (266)
T cd05064 162 -IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-RLPAPR-NC----- 233 (266)
T ss_pred -hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-CCCCCC-CC-----
Confidence 000011235678999999999999999999999999999775 999999888777766665542 222211 11
Q ss_pred HHhhHHHHHHHHhhcCcccccCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..+.+++.+||+.+|++||++.
T Consensus 234 -~~~~~~li~~c~~~~p~~RP~~~ 256 (266)
T cd05064 234 -PNLLHQLMLDCWQKERGERPRFS 256 (266)
T ss_pred -CHHHHHHHHHHcCCCchhCCCHH
Confidence 12489999999999999999986
No 173
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3e-43 Score=358.73 Aligned_cols=261 Identities=23% Similarity=0.280 Sum_probs=205.0
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~ 157 (489)
+.+..++|++++.||+|+||.||+|++.......+...||||++...... .....+.+|+.+|+.+. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~~l~~l~~HpnIv~l~~~ 109 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS--SEKQALMSELKIMTHLGPHLNIVNLLGA 109 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence 45667899999999999999999999865433334568999999653221 23356788999999996 9999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCC-----------------------------------------------------
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQP----------------------------------------------------- 184 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~----------------------------------------------------- 184 (489)
+.+.+.+|||||||++|+|.+++....
T Consensus 110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 110 CTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred EccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 999999999999999999998876431
Q ss_pred -----------------------------------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeE
Q 011302 185 -----------------------------------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVL 223 (489)
Q Consensus 185 -----------------------------------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NIL 223 (489)
...+++.++..++.||+.||+|||+++|+||||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 124778888999999999999999999999999999999
Q ss_pred eccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccC
Q 011302 224 VREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVD 303 (489)
Q Consensus 224 l~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (489)
++.++.+||+|||+++.+.....
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~--------------------------------------------------------- 292 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSN--------------------------------------------------------- 292 (400)
T ss_pred EeCCCEEEEEeCCcceecccccc---------------------------------------------------------
Confidence 99999999999999843211000
Q ss_pred CCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHh
Q 011302 304 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINIL 382 (489)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~ 382 (489)
........|++.|+|||++.+..++.++|||||||++|||++ |..||.+......+....
T Consensus 293 -------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~ 353 (400)
T cd05105 293 -------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI 353 (400)
T ss_pred -------------------ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH
Confidence 001122357789999999999889999999999999999997 999998765544444433
Q ss_pred cCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 383 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 383 ~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
......+... . ....+.+||.+||+.||++||++.
T Consensus 354 ~~~~~~~~~~-~------~~~~l~~li~~cl~~dP~~RPt~~ 388 (400)
T cd05105 354 KSGYRMAKPD-H------ATQEVYDIMVKCWNSEPEKRPSFL 388 (400)
T ss_pred hcCCCCCCCc-c------CCHHHHHHHHHHCccCHhHCcCHH
Confidence 3332222111 1 122589999999999999999986
No 174
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-43 Score=346.49 Aligned_cols=257 Identities=24% Similarity=0.394 Sum_probs=208.6
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
.+|++++.||+|+||.||+|.+.. .++.||+|.+...... ....+.+|+.+++.++||||+++++++..++.
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 90 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIA-----TGQEVAIKQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDE 90 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECC-----CCCEEEEEEEecCccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCE
Confidence 789999999999999999999876 5678999999754322 22446679999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||++|++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++.....
T Consensus 91 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 91 LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred EEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 9999999999999998865 3588999999999999999999999999999999999999999999999998732211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 168 ~------------------------------------------------------------------------------~ 169 (297)
T cd06656 168 E------------------------------------------------------------------------------Q 169 (297)
T ss_pred C------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+.......+..... +....+. ....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~ 243 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT--PELQNPE----RLSA 243 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCC--CCCCCcc----ccCH
Confidence 001223688999999999998899999999999999999999999987765443332222111 1110000 1123
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
.+.+||.+||..||++||++. ++++||||+..
T Consensus 244 ~~~~li~~~l~~~p~~Rps~~----~il~~~~~~~~ 275 (297)
T cd06656 244 VFRDFLNRCLEMDVDRRGSAK----ELLQHPFLKLA 275 (297)
T ss_pred HHHHHHHHHccCChhhCcCHH----HHhcCchhccc
Confidence 478999999999999999987 99999999763
No 175
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=5.1e-43 Score=337.86 Aligned_cols=264 Identities=27% Similarity=0.377 Sum_probs=213.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||.|+||+||+|.+.. ++..+|+|++....... ....+.+|+.+++.++|+||+++++.+...+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 73 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLP-----NNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDE 73 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcC-----CCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCE
Confidence 479999999999999999999876 46789999987543332 44567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCC-CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPG-KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.|+||||++|++|.+++..... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++..+.
T Consensus 74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~ 153 (267)
T cd06610 74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLA 153 (267)
T ss_pred EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence 9999999999999999876432 568999999999999999999999999999999999999999999999999974322
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..... .
T Consensus 154 ~~~~~--------------------------------------------------------------------------~ 159 (267)
T cd06610 154 DGGDR--------------------------------------------------------------------------T 159 (267)
T ss_pred cCccc--------------------------------------------------------------------------c
Confidence 10000 0
Q ss_pred ccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC-CCCCCCCCchhHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT-FPRIGVSSSKEFE 400 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~~~ 400 (489)
.......+|+..|+|||++... .++.++|+|||||++|||++|+.||...+....+.++...... ++.... .-.
T Consensus 160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 235 (267)
T cd06610 160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGAD----YKK 235 (267)
T ss_pred ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccc----ccc
Confidence 0012334689999999999877 6899999999999999999999999888776666665554221 111110 001
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
....+.+||.+||..||++||++. +|++||||
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~----~ll~~p~~ 267 (267)
T cd06610 236 YSKSFRKMISLCLQKDPSKRPTAE----ELLKHKFF 267 (267)
T ss_pred ccHHHHHHHHHHcCCChhhCcCHH----HHhhCCCC
Confidence 123578999999999999999987 99999998
No 176
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9.1e-43 Score=334.43 Aligned_cols=256 Identities=29% Similarity=0.441 Sum_probs=215.3
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++++.||.|+||.||.++... .++.+++|.+....... ....++.+|+.+++.++|+||+++++++.+.+.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~-----~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~ 74 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTE-----DDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTL 74 (256)
T ss_pred CceEeeEecccCCceEEEEEEcC-----CCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeE
Confidence 58999999999999999999876 56789999987543322 2344567899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
++||||+++|+|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++......
T Consensus 75 ~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 75 LIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred EEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 99999999999999998765567899999999999999999999999999999999999999999999999997432110
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
. .
T Consensus 155 ~------------------------------------------------------------------------------~ 156 (256)
T cd08221 155 Y------------------------------------------------------------------------------S 156 (256)
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
......|++.|+|||.+.+..++.++|||||||++|||++|..||.+.+..+....+..+...... . ....+
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~ 228 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV--S------VYSSE 228 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc--c------ccCHH
Confidence 112346899999999999888899999999999999999999999988888877777665433211 1 11235
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+.+||.+||..+|.+||++. ++++|+|+
T Consensus 229 ~~~~i~~~l~~~p~~R~s~~----~ll~~~~l 256 (256)
T cd08221 229 LISLVHSLLQQDPEKRPTAD----EVLDQPLL 256 (256)
T ss_pred HHHHHHHHcccCcccCCCHH----HHhhCcCC
Confidence 89999999999999999987 99999986
No 177
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=6e-43 Score=335.68 Aligned_cols=256 Identities=26% Similarity=0.464 Sum_probs=214.0
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++.+.||+|+||.||+++... .++.||+|.+....... .....+.+|+.+++.++||||+++++++...+..
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~-----~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKE-----DGKQYVIKEINISKMSP-KEREESRKEVAVLSNMKHPNIVQYQESFEENGNL 74 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcC-----CCCEEEEEEEEhHhCCh-HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeE
Confidence 58999999999999999999876 46789999997654332 2335677899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++......
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 75 YIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST 154 (256)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence 99999999999999887654456889999999999999999999999999999999999999999999999997432110
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 155 ------------------------------------------------------------------------------~~ 156 (256)
T cd08218 155 ------------------------------------------------------------------------------VE 156 (256)
T ss_pred ------------------------------------------------------------------------------hh
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+...++..+.... ..... ...
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~ 228 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP--VSSHY------SYD 228 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC--CcccC------CHH
Confidence 0112358889999999999889999999999999999999999999888777777776554321 11111 224
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+.++|.+||+.+|++||++. ++++||||
T Consensus 229 ~~~li~~~l~~~p~~Rp~~~----~vl~~~~~ 256 (256)
T cd08218 229 LRNLVSQLFKRNPRDRPSVN----SILEKNFI 256 (256)
T ss_pred HHHHHHHHhhCChhhCcCHH----HHhhCcCC
Confidence 89999999999999999998 99999998
No 178
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.8e-43 Score=344.92 Aligned_cols=259 Identities=23% Similarity=0.275 Sum_probs=199.3
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCC-----------CCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPM-----------VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF 150 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~-----------~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 150 (489)
..++|++.++||+|+||.||+|.++... ....+..||+|++..... ......+.+|+.+|..++|||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~n 80 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN--KNARNDFLKEVKILSRLKDPN 80 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCC
Confidence 4478999999999999999999875432 112345799999875421 223456778999999999999
Q ss_pred cccccceeecCceEEEEEeecCCCchHHHHHhCC-----------------CCCCChhhHHHHHHHHHHHHHHHHhCCCe
Q 011302 151 LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQP-----------------GKRFGISSAKFYAAETLLALEYLHMMGIV 213 (489)
Q Consensus 151 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~~L~yLH~~~ii 213 (489)
|+++++++.+.+..|+||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999886532 12467788899999999999999999999
Q ss_pred eecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccc
Q 011302 214 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 293 (489)
Q Consensus 214 HrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (489)
||||||+|||++.++.+||+|||+++.+.....
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~----------------------------------------------- 193 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDY----------------------------------------------- 193 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCce-----------------------------------------------
Confidence 999999999999999999999999843211000
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh--CCCCCCC
Q 011302 294 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY--GTTPFKG 371 (489)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~ 371 (489)
........++..|+|||++.+..++.++|||||||++|||++ +..||.+
T Consensus 194 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 194 -----------------------------YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred -----------------------------eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 001122356789999999998889999999999999999986 6788887
Q ss_pred CCcHHHHHHHhc---CC--CCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 372 ENNEKTLINILK---KP--LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 372 ~~~~~~~~~i~~---~~--~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+..+.+..+.. .. ...+...... +..+.+||.+||..||++||++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~li~~cl~~~p~~RPs~~ 296 (304)
T cd05096 245 LTDEQVIENAGEFFRDQGRQVYLFRPPPC------PQGLYELMLQCWSRDCRERPSFS 296 (304)
T ss_pred CCHHHHHHHHHHHhhhccccccccCCCCC------CHHHHHHHHHHccCCchhCcCHH
Confidence 766555443321 10 0011111111 12489999999999999999996
No 179
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.1e-43 Score=339.96 Aligned_cols=258 Identities=26% Similarity=0.415 Sum_probs=206.0
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|++.+.||+|+||.||+|++.. .++.||+|++..... .....+.+|+.+++.++||||+++++++..+
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~ 78 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLH-----TGELAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYLSR 78 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECC-----CCeEEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEEeC
Confidence 34689999999999999999999876 567899999874322 1223466799999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
+..|+||||+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++.+
T Consensus 79 ~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~ 156 (267)
T cd06646 79 EKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKI 156 (267)
T ss_pred CEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceee
Confidence 9999999999999999988764 56899999999999999999999999999999999999999999999999998432
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
...
T Consensus 157 ~~~----------------------------------------------------------------------------- 159 (267)
T cd06646 157 TAT----------------------------------------------------------------------------- 159 (267)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred cccCCccccCCCCccCcchhcC---CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 322 INARSKSFVGTHEYLAPEVISG---QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
........|++.|+|||.+.+ ..++.++|||||||++|||++|..||...+.......+.......+......
T Consensus 160 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 235 (267)
T cd06646 160 -IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKT--- 235 (267)
T ss_pred -ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCcccc---
Confidence 001123468899999999853 4468899999999999999999999976654443333333322222211110
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 435 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~ 435 (489)
..+..+.+||++||..||++||++. ++++|+|
T Consensus 236 -~~~~~~~~li~~~l~~~P~~Rp~~~----~il~~l~ 267 (267)
T cd06646 236 -KWSSTFHNFVKISLTKNPKKRPTAE----RLLTHLF 267 (267)
T ss_pred -ccCHHHHHHHHHHhhCChhhCcCHH----HHhcCCC
Confidence 1123589999999999999999987 9999987
No 180
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.4e-43 Score=352.70 Aligned_cols=266 Identities=20% Similarity=0.278 Sum_probs=205.8
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 157 (489)
|+++.++|++.+.||+|+||.||+|.+.+.....+++.||+|+++..... .....+..|+.++.++ +|+||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA--SEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCH--HHHHHHHHHHHHHHhhccCcchhheeee
Confidence 56677899999999999999999998765433345688999998643221 2334566799999999 79999999998
Q ss_pred ee-cCceEEEEEeecCCCchHHHHHhCCC---------------------------------------------------
Q 011302 158 FE-ASHYSCLVMEYCPGGDLYAARQRQPG--------------------------------------------------- 185 (489)
Q Consensus 158 ~~-~~~~~~lV~E~~~gg~L~~~l~~~~~--------------------------------------------------- 185 (489)
+. .+..+|+||||+++|+|.+++.....
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 75 45678999999999999988864321
Q ss_pred --------CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHHH
Q 011302 186 --------KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAI 257 (489)
Q Consensus 186 --------~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~ 257 (489)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+...+.
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~----------- 228 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----------- 228 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----------
Confidence 2578889999999999999999999999999999999999999999999999844321100
Q ss_pred hhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCCCccC
Q 011302 258 EKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLA 337 (489)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~a 337 (489)
........++..|+|
T Consensus 229 -----------------------------------------------------------------~~~~~~~~~~~~y~a 243 (337)
T cd05054 229 -----------------------------------------------------------------YVRKGDARLPLKWMA 243 (337)
T ss_pred -----------------------------------------------------------------hhhccCCCCCccccC
Confidence 001123356778999
Q ss_pred cchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcC
Q 011302 338 PEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKN 416 (489)
Q Consensus 338 PE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~d 416 (489)
||++.+..++.++|||||||++|||++ |..||.+....+.+............ .... ...+.+|+.+||+.+
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~l~~~cl~~~ 316 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA-PEYA------TPEIYSIMLDCWHNN 316 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCC-CccC------CHHHHHHHHHHccCC
Confidence 999999999999999999999999997 99999876554444443332221111 1111 125899999999999
Q ss_pred cccccCCCCChHHHHcC
Q 011302 417 PKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 417 P~~R~~~~~~~~~ll~h 433 (489)
|++||++. ++++|
T Consensus 317 p~~RPs~~----ell~~ 329 (337)
T cd05054 317 PEDRPTFS----ELVEI 329 (337)
T ss_pred hhhCcCHH----HHHHH
Confidence 99999997 66654
No 181
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.3e-42 Score=339.66 Aligned_cols=269 Identities=40% Similarity=0.720 Sum_probs=214.2
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH-HHHHHHHHHHHHHHHhC-CCCCcccccceeecCc
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-RKKLHRADMEKVILTML-DHPFLPTLYAEFEASH 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 162 (489)
+|++.+.||+|+||.||+|++.... ..+..||||++++..... .....++..|+.++..+ +||||+++++++..+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~--~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGH--DAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccc--cCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC
Confidence 4889999999999999999876432 146789999998654432 23345677899999999 5999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+++|+|.+.+... ..+++..++.++.|++.||.|||+.|++||||||.||+++.++.++|+|||+++.+.
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 79 KLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 999999999999999988764 568999999999999999999999999999999999999999999999999874321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
...
T Consensus 157 ~~~----------------------------------------------------------------------------- 159 (288)
T cd05583 157 AEE----------------------------------------------------------------------------- 159 (288)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccCCccccCCCCccCcchhcCCC--CCCcccHHHHHHHHHHHhhCCCCCCCCCc----HHHHHHHhcCCCCCCCCCCCCc
Q 011302 323 NARSKSFVGTHEYLAPEVISGQG--HGSAVDWWTLGVFLYEMLYGTTPFKGENN----EKTLINILKKPLTFPRIGVSSS 396 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~--~~~~~DiwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~ 396 (489)
........|++.|+|||.+.+.. .+.++||||||+++|||++|..||..... .+....+.......|..
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 234 (288)
T cd05583 160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKT----- 234 (288)
T ss_pred ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcc-----
Confidence 00112346889999999987765 68899999999999999999999965432 22233333332222221
Q ss_pred hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc
Q 011302 397 KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 397 ~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~ 444 (489)
....+.+||.+||+.||++||++. .+.++++||||+.++|+.+
T Consensus 235 ----~~~~l~~li~~~l~~~p~~R~t~~-~~~~~l~~~~~~~~~~~~~ 277 (288)
T cd05583 235 ----MSAEARDFIQKLLEKDPKKRLGAN-GADEIKNHPFFQGIDWDDL 277 (288)
T ss_pred ----cCHHHHHHHHHHhcCCHhhccCcc-hHHHHhcCcccccCCHHHH
Confidence 112488999999999999999974 5568999999999999876
No 182
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.2e-42 Score=337.74 Aligned_cols=279 Identities=37% Similarity=0.604 Sum_probs=223.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCc
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASH 162 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~ 162 (489)
++|.+.+.||+|+||.||+|..+. +++.||+|++.+...........+.+|..+++.++ ||||+++++++.+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKE-----TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcC-----CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc
Confidence 479999999999999999999886 57889999998765544444567788999999998 999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999999998875 479999999999999999999999999999999999999999999999999984432
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
........ ..... .........
T Consensus 154 ~~~~~~~~-----------------------~~~~~-----------------------------------~~~~~~~~~ 175 (280)
T cd05581 154 PNSSPESN-----------------------KGDAT-----------------------------------NIDSQIEKN 175 (280)
T ss_pred CccccccC-----------------------CCCCc-----------------------------------ccccccccc
Confidence 11000000 00000 000000001
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~ 402 (489)
......+.|+..|+|||++.+..++.++|||||||++|+|++|..||...+....+..+......+|... .
T Consensus 176 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~ 246 (280)
T cd05581 176 RRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNF---------P 246 (280)
T ss_pred ccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCCcc---------C
Confidence 1223455789999999999988899999999999999999999999998887777777665554444322 1
Q ss_pred hhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..+.+||.+||..+|++||++.+..+++++||||
T Consensus 247 ~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 247 PDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 2489999999999999999995555599999998
No 183
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.8e-43 Score=341.85 Aligned_cols=263 Identities=27% Similarity=0.403 Sum_probs=205.8
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|+++. .++.||+|++...... ......+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 74 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRE-----TGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRK 74 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECC-----CCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCE
Confidence 479999999999999999999886 5788999998644211 1122346679999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||++++.|..++... ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 75 ~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 75 LHLVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred EEEEEeccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 99999999998887776543 4689999999999999999999999999999999999999999999999999743211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 153 ~------------------------------------------------------------------------------~ 154 (286)
T cd07847 153 P------------------------------------------------------------------------------G 154 (286)
T ss_pred C------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC------------------
Q 011302 324 ARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK------------------ 384 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~------------------ 384 (489)
.......|+..|+|||++.+ ..++.++|||||||++|||++|..||.+.+..+....+...
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 155 DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence 01122357889999999876 45789999999999999999999999987765544433210
Q ss_pred -CCCCCCCCCCCchh--H-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 385 -PLTFPRIGVSSSKE--F-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 385 -~~~~p~~~~~~~~~--~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
....|......... + .....+.+||.+||..||++||++. +++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~----eil~~~~f 286 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCE----ELLEHPYF 286 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHH----HHhcCCCC
Confidence 00111110000000 0 1123588999999999999999997 99999998
No 184
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3e-43 Score=348.79 Aligned_cols=260 Identities=27% Similarity=0.375 Sum_probs=190.1
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee--cCceEEE
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE--ASHYSCL 166 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~--~~~~~~l 166 (489)
.++||+|+||+||+|+.++. .....||+|.+..... ...+.+|+.+++.++||||+++++++. .+..+|+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~---~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~l 77 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDG---KDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWL 77 (317)
T ss_pred ceEeccCCCeeEEEEEecCC---CccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEE
Confidence 36899999999999997653 2457899999875422 123556999999999999999999884 4568899
Q ss_pred EEeecCCCchHHHHHhC-------CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEe----ccCCcEEEccc
Q 011302 167 VMEYCPGGDLYAARQRQ-------PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLV----REDGHIMLSDF 235 (489)
Q Consensus 167 V~E~~~gg~L~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl----~~~~~vkl~DF 235 (489)
||||+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+||
T Consensus 78 v~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 78 LFDYA-EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred EEeee-CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 99999 46887776432 12358888999999999999999999999999999999999 46689999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+++.......
T Consensus 157 G~a~~~~~~~~--------------------------------------------------------------------- 167 (317)
T cd07867 157 GFARLFNSPLK--------------------------------------------------------------------- 167 (317)
T ss_pred cceeccCCCcc---------------------------------------------------------------------
Confidence 99843321000
Q ss_pred cccccccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcH---------HHHHHHhcC-
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNE---------KTLINILKK- 384 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---------~~~~~i~~~- 384 (489)
........+||+.|+|||++.+. .++.++|||||||++|||++|.+||...... ..+..+...
T Consensus 168 ------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 168 ------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred ------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 00011234689999999999874 4799999999999999999999999754321 111111110
Q ss_pred --C-----------CCCCCCC---------CCCch------hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 385 --P-----------LTFPRIG---------VSSSK------EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 385 --~-----------~~~p~~~---------~~~~~------~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+ ..++... ..... .......+.+||.+||+.||.+||++. |+++||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~----e~l~hp~f 317 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSE----QALQDPYF 317 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHH----HHhcCCCC
Confidence 0 0000000 00000 001122478999999999999999998 99999998
No 185
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=9.8e-43 Score=333.92 Aligned_cols=254 Identities=26% Similarity=0.415 Sum_probs=212.3
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++.+.||+|+||.||+|.... ++..||+|.+....... .....+..|+.+++.++||||+++++.+..++..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 74 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKA-----DQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLLSHPNIIEYYENFLEDKAL 74 (256)
T ss_pred CceEEEEecccCceEEEEEEEcC-----CCcEEEEEEEecccccc-HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEE
Confidence 58999999999999999999876 57889999997654332 2345677899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC-CcEEEcccCCCccccc
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED-GHIMLSDFDLSFKCDV 243 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~-~~vkl~DFG~a~~~~~ 243 (489)
|+||||++|++|.+++....+..+++..+..++.|++.||+|||++||+||||||+||+++.+ +.+||+|||++.....
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 75 MIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 999999999999999987655668999999999999999999999999999999999999865 4689999999743210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.
T Consensus 155 -------------------------------------------------------------------------------~ 155 (256)
T cd08220 155 -------------------------------------------------------------------------------K 155 (256)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC-CCCCCCCCchhHHHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT-FPRIGVSSSKEFEEV 402 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~~~~~ 402 (489)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+.......+...... ++.. ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 226 (256)
T cd08220 156 SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDR---------YS 226 (256)
T ss_pred ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCC---------cC
Confidence 0112236889999999999888899999999999999999999999988877766666554322 1211 11
Q ss_pred hhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..+.+||.+||..||++||++. ++++||||
T Consensus 227 ~~l~~li~~~l~~~p~~Rpt~~----~ll~~p~~ 256 (256)
T cd08220 227 PDLRQLILSMLNLDPSKRPQLS----QIMAQPIC 256 (256)
T ss_pred HHHHHHHHHHccCChhhCCCHH----HHhhCCCC
Confidence 2589999999999999999998 99999997
No 186
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=9.3e-43 Score=336.67 Aligned_cols=260 Identities=27% Similarity=0.418 Sum_probs=206.6
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHH--HHHHHHHHHHHHHHHHHhCCCCCcccccceeec-
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA- 160 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~- 160 (489)
.+|++.+.||+|+||.||+|.+.. ++..||+|.+..... ........+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVD-----TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcC-----CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC
Confidence 478999999999999999999876 567899999864321 122344567789999999999999999998865
Q ss_pred -CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 161 -SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 161 -~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
...+|+||||+++++|.+++... ..+++..+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||++.
T Consensus 77 ~~~~~~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 77 AEKTLTIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 46789999999999999988765 468999999999999999999999999999999999999999999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
........
T Consensus 155 ~~~~~~~~------------------------------------------------------------------------ 162 (266)
T cd06651 155 RLQTICMS------------------------------------------------------------------------ 162 (266)
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 33210000
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
........|+..|+|||.+.+..++.++|||||||++|||++|+.||...+....+..+...... |.....
T Consensus 163 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~----- 233 (266)
T cd06651 163 ---GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN-PQLPSH----- 233 (266)
T ss_pred ---CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCC-CCCchh-----
Confidence 00011235889999999999988999999999999999999999999887666555554432211 111111
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
....+++|| +||..+|++||++. ++++||||+
T Consensus 234 -~~~~~~~li-~~~~~~p~~Rp~~~----eil~hp~~~ 265 (266)
T cd06651 234 -ISEHARDFL-GCIFVEARHRPSAE----ELLRHPFAQ 265 (266)
T ss_pred -cCHHHHHHH-HHhcCChhhCcCHH----HHhcCcccc
Confidence 122478888 57778999999987 999999996
No 187
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.2e-42 Score=335.69 Aligned_cols=260 Identities=27% Similarity=0.421 Sum_probs=207.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHH--HHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA--LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
.+|++.+.||+|+||.||+|.+.. +++.||||.+..+. .........+.+|+.+++.++||||+++++++.+.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~-----~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDAD-----TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcC-----CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC
Confidence 579999999999999999999876 57889999886422 11123456677899999999999999999998763
Q ss_pred --ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 162 --HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 162 --~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
..+|+||||++|++|.+++... ..+++..+..++.|++.||+|||+++|+|+||||+|||++.++.++|+|||++.
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 77 MERTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred CCceEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 5789999999999999988765 458899999999999999999999999999999999999999999999999974
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.......
T Consensus 155 ~~~~~~~------------------------------------------------------------------------- 161 (265)
T cd06652 155 RLQTICL------------------------------------------------------------------------- 161 (265)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 3211000
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.........|+..|+|||++.+..++.++|||||||++|||++|+.||........+.++...... +....
T Consensus 162 --~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~------ 232 (265)
T cd06652 162 --SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN-PVLPP------ 232 (265)
T ss_pred --cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC-CCCch------
Confidence 000112235889999999999888999999999999999999999999877665555554433211 11110
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
.....+.++|++||. +|++||++. ++++|||++
T Consensus 233 ~~~~~~~~~i~~~l~-~p~~Rp~~~----~il~~~~~~ 265 (265)
T cd06652 233 HVSDHCRDFLKRIFV-EAKLRPSAD----ELLRHTFVH 265 (265)
T ss_pred hhCHHHHHHHHHHhc-ChhhCCCHH----HHhcCcccC
Confidence 112358899999994 999999987 999999984
No 188
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.8e-43 Score=343.41 Aligned_cols=262 Identities=26% Similarity=0.389 Sum_probs=200.3
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++.+.||+|+||.||+|+++. ++..||+|.+...... ......+.+|+.+++.++||||+++++++.+...+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~-----~g~~~~~k~~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 74 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRE-----THEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKL 74 (284)
T ss_pred CceeEEEecccCCeEEEEEEECC-----CCcEEEEEEeeccccc-ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCce
Confidence 48899999999999999999886 5678999998754221 12234456799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 75 ~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 75 TLVFEYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred EEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 99999995 6887777653 256999999999999999999999999999999999999999999999999997422100
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 153 ------------------------------------------------------------------------------~~ 154 (284)
T cd07839 153 ------------------------------------------------------------------------------VR 154 (284)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCC-CCCCcHHHHHHHhcCC-----------------
Q 011302 325 RSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPF-KGENNEKTLINILKKP----------------- 385 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf-~~~~~~~~~~~i~~~~----------------- 385 (489)
......+++.|+|||++.+.. ++.++|||||||++|||++|..|| .+.+..+.+..+....
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 011235788999999987754 689999999999999999988885 4444444333332100
Q ss_pred CCCCCCCCCCc---hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 386 LTFPRIGVSSS---KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 386 ~~~p~~~~~~~---~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..++....... ........+.+||.+||..||.+||++. +++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~----~il~h~~f 284 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAE----EALQHPYF 284 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHH----HHhcCCCC
Confidence 00000000000 0001123588999999999999999987 99999998
No 189
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=7.3e-43 Score=339.45 Aligned_cols=264 Identities=22% Similarity=0.269 Sum_probs=208.1
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
.+..++|++.+.||+|+||.||+|.+++.........||||++...... ....++.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~iv~~~~~~~ 79 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM--RERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 4556889999999999999999999876443345678999998643211 22345778999999999999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCC--------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEE
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQP--------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIM 231 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vk 231 (489)
.+...|+||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.|++||||||+|||++.++.++
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEE
Confidence 9999999999999999999886532 12356778889999999999999999999999999999999999999
Q ss_pred EcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccc
Q 011302 232 LSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQEL 311 (489)
Q Consensus 232 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (489)
|+|||+++.+.....
T Consensus 160 l~dfg~~~~~~~~~~----------------------------------------------------------------- 174 (277)
T cd05062 160 IGDFGMTRDIYETDY----------------------------------------------------------------- 174 (277)
T ss_pred ECCCCCccccCCcce-----------------------------------------------------------------
Confidence 999999843221000
Q ss_pred cCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCC
Q 011302 312 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPR 390 (489)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~ 390 (489)
........+++.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+.........
T Consensus 175 -----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 243 (277)
T cd05062 175 -----------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKP 243 (277)
T ss_pred -----------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC
Confidence 000011246788999999998889999999999999999998 79999988877766666554322111
Q ss_pred CCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 391 IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 391 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
.... ..+.+||.+||+.||++||++. +++++
T Consensus 244 --~~~~------~~~~~li~~~l~~~p~~Rps~~----e~l~~ 274 (277)
T cd05062 244 --DNCP------DMLFELMRMCWQYNPKMRPSFL----EIISS 274 (277)
T ss_pred --CCCC------HHHHHHHHHHcCCChhhCcCHH----HHHHH
Confidence 1111 2489999999999999999987 66553
No 190
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7.3e-43 Score=338.81 Aligned_cols=258 Identities=30% Similarity=0.508 Sum_probs=213.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||.|+||.||+|++.. ++..||+|++..+.. ......+..|+.+++.++|+||+++++++.++..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 73 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKR-----TNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSK 73 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECC-----CCeEEEEEEeecccc--chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCe
Confidence 468899999999999999999876 578899999975431 2334456779999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+|+||+++++|.+++... .+++..+..++.|++.||.|||+++++||||+|+||+++.++.++|+|||+++....
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 150 (274)
T cd06609 74 LWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS 150 (274)
T ss_pred EEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence 99999999999999988763 689999999999999999999999999999999999999999999999999844321
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
..
T Consensus 151 ~~------------------------------------------------------------------------------ 152 (274)
T cd06609 151 TM------------------------------------------------------------------------------ 152 (274)
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||...+.......+..... +..... ....
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~ 225 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNP--PSLEGN-----KFSK 225 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCC--CCCccc-----ccCH
Confidence 011234688999999999998899999999999999999999999988776655555444321 111111 0122
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.+.++|.+||..+|++||++. ++++||||+...
T Consensus 226 ~~~~~l~~~l~~~p~~Rpt~~----~il~~~~~~~~~ 258 (274)
T cd06609 226 PFKDFVSLCLNKDPKERPSAK----ELLKHKFIKKAK 258 (274)
T ss_pred HHHHHHHHHhhCChhhCcCHH----HHhhChhhcCCC
Confidence 488999999999999999987 999999998754
No 191
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.5e-43 Score=341.79 Aligned_cols=257 Identities=27% Similarity=0.389 Sum_probs=206.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++++.||+|+||.||+|.+.. .+..||+|.+..... ......+.+|+.+++.++||||+++++++...+.
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 73 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRP-----TGVTMAMKEIRLELD--ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGA 73 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcC-----CCcEEEEEEeecccC--HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCe
Confidence 478999999999999999999876 568899998865321 1234567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCC-CCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQP-GKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
+|+||||++|++|..++.... ...+++..+..++.||+.||.|||+ .||+||||||+|||++.++.+||+|||++..+
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 153 (286)
T cd06622 74 VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL 153 (286)
T ss_pred EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999999999999988876531 2368999999999999999999997 59999999999999999999999999987322
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
..
T Consensus 154 ~~------------------------------------------------------------------------------ 155 (286)
T cd06622 154 VA------------------------------------------------------------------------------ 155 (286)
T ss_pred cC------------------------------------------------------------------------------
Confidence 10
Q ss_pred cccCCccccCCCCccCcchhcCC------CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHH---HHhcCC-CCCCCC
Q 011302 322 INARSKSFVGTHEYLAPEVISGQ------GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI---NILKKP-LTFPRI 391 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~------~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~---~i~~~~-~~~p~~ 391 (489)
.......|++.|+|||.+.+. .++.++|||||||++|+|++|..||.......... .+.... ...+.
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (286)
T cd06622 156 --SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPS- 232 (286)
T ss_pred --CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCc-
Confidence 011223588899999998654 34789999999999999999999997765444333 233221 11111
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
. ....+.+||.+||..+|++||++. +++.||||....
T Consensus 233 --~------~~~~~~~li~~~l~~~p~~Rp~~~----~l~~~~~~~~~~ 269 (286)
T cd06622 233 --G------YSDDAQDFVAKCLNKIPNRRPTYA----QLLEHPWLVKYK 269 (286)
T ss_pred --c------cCHHHHHHHHHHcccCcccCCCHH----HHhcChhhhhcc
Confidence 1 123589999999999999999987 999999997653
No 192
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.8e-42 Score=333.31 Aligned_cols=257 Identities=30% Similarity=0.464 Sum_probs=211.7
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|.+.. +++.+++|++...... ....+..|+.+++.++||||+++++++.++..
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 74 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIA-----TGELVAIKVIKLEPGD---DFEIIQQEISMLKECRHPNIVAYFGSYLRRDK 74 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecC-----CCCEEEEEEEEcCchh---hHHHHHHHHHHHHhCCCCChhceEEEEEeCCE
Confidence 689999999999999999999876 4678999999754322 34567779999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
+|+||||+++++|.+++... ...+++.++..++.|++.||.|||++||+|+||||+||+++.++.+||+|||++..+..
T Consensus 75 ~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 75 LWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred EEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 99999999999999988664 25689999999999999999999999999999999999999999999999999743210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 154 ~------------------------------------------------------------------------------~ 155 (262)
T cd06613 154 T------------------------------------------------------------------------------I 155 (262)
T ss_pred h------------------------------------------------------------------------------h
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCC---CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQ---GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
.......|+..|+|||.+.+. .++.++|||||||++|||++|..||.+.+.......+.......+.... ...
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 231 (262)
T cd06613 156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKD----KEK 231 (262)
T ss_pred hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccc----hhh
Confidence 011234688899999999877 7889999999999999999999999887766655555444332222111 112
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 435 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~ 435 (489)
....+.+||.+||..+|.+||++. +++.|+|
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rpt~~----~il~~~~ 262 (262)
T cd06613 232 WSPVFHDFIKKCLTKDPKKRPTAT----KLLQHPF 262 (262)
T ss_pred hhHHHHHHHHHHcCCChhhCCCHH----HHhcCCC
Confidence 234589999999999999999997 9999998
No 193
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-44 Score=341.27 Aligned_cols=263 Identities=27% Similarity=0.412 Sum_probs=212.9
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-C-CC----ccccc
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-H-PF----LPTLY 155 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-pn----Iv~l~ 155 (489)
..++|.++..||+|+||.|..+.++. .+..||||+++.-. ...+....|+++|.++. + |+ +|.+.
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~-----~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRE-----TKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecC-----CCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 35789999999999999999999997 46889999997432 33445667999999984 2 33 88999
Q ss_pred ceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc---------
Q 011302 156 AEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE--------- 226 (489)
Q Consensus 156 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~--------- 226 (489)
++|.-.++.|||+|.+ |-++++++..+...+|+...++.|++|++++|+|||+.+++|.||||||||+..
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~ 236 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNP 236 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEecc
Confidence 9999999999999999 889999999988889999999999999999999999999999999999999942
Q ss_pred -----------CCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccc
Q 011302 227 -----------DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTV 295 (489)
Q Consensus 227 -----------~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (489)
+-.++|+|||-|+.-.
T Consensus 237 k~~~~~~r~~ks~~I~vIDFGsAtf~~----------------------------------------------------- 263 (415)
T KOG0671|consen 237 KKKVCFIRPLKSTAIKVIDFGSATFDH----------------------------------------------------- 263 (415)
T ss_pred CCccceeccCCCcceEEEecCCcceec-----------------------------------------------------
Confidence 2348999999873221
Q ss_pred cccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH
Q 011302 296 TTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 375 (489)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~ 375 (489)
.-...++-|..|+|||++++-+|++.+||||+||||+||++|...|.+.++.
T Consensus 264 ----------------------------e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 264 ----------------------------EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred ----------------------------cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 1124567899999999999999999999999999999999999999988766
Q ss_pred H---HHHHHhc------------------CCCCCCCCCCCC--------ch--------hHHHHhhHHHHHHHHhhcCcc
Q 011302 376 K---TLINILK------------------KPLTFPRIGVSS--------SK--------EFEEVVKLQDLISKLLVKNPK 418 (489)
Q Consensus 376 ~---~~~~i~~------------------~~~~~p~~~~~~--------~~--------~~~~~~~l~~li~~~L~~dP~ 418 (489)
+ +++.|+. +.+.+|...... .. ...+..++.|||++||..||.
T Consensus 316 EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 316 EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 6 3444432 111222211111 00 013445689999999999999
Q ss_pred cccCCCCChHHHHcCCCcCCC
Q 011302 419 KRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 419 ~R~~~~~~~~~ll~hp~f~~~ 439 (489)
+|+|+. |+|.||||+..
T Consensus 396 ~RiTl~----EAL~HpFF~~~ 412 (415)
T KOG0671|consen 396 RRITLR----EALSHPFFARL 412 (415)
T ss_pred ccccHH----HHhcCHHhhcC
Confidence 999998 99999999874
No 194
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.5e-43 Score=375.60 Aligned_cols=271 Identities=22% Similarity=0.302 Sum_probs=203.2
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.++||+|+||.||+|.+.. +++.||||++..+.........++.+|+.+++.++||||+++++++.+++.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~-----tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPV-----CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECC-----CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCE
Confidence 689999999999999999999876 578899999976543333445678889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCC---------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcc
Q 011302 164 SCLVMEYCPGGDLYAARQRQP---------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSD 234 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~D 234 (489)
.|+||||++||+|.+++.... ...++...+..++.||+.||+|||++|||||||||+|||++.+|.+||+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD 156 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD 156 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence 999999999999999886421 12355667788999999999999999999999999999999999999999
Q ss_pred cCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCC
Q 011302 235 FDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDD 314 (489)
Q Consensus 235 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (489)
||+++.......... ... ... .+
T Consensus 157 FGLAk~i~~~~~~~~-----------------~l~---------~~~---------------------~~---------- 179 (932)
T PRK13184 157 WGAAIFKKLEEEDLL-----------------DID---------VDE---------------------RN---------- 179 (932)
T ss_pred cCcceeccccccccc-----------------ccc---------ccc---------------------cc----------
Confidence 999854321000000 000 000 00
Q ss_pred ccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHH-hcCCCCCCCCCC
Q 011302 315 PEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI-LKKPLTFPRIGV 393 (489)
Q Consensus 315 ~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i-~~~~~~~p~~~~ 393 (489)
............+||+.|||||++.+..++.++|||||||++|||++|..||.+.+........ ...+......
T Consensus 180 ---s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~-- 254 (932)
T PRK13184 180 ---ICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPY-- 254 (932)
T ss_pred ---ccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhcccc--
Confidence 0000001123457999999999999999999999999999999999999999876554332221 1111111100
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCCCC
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKG 426 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~ 426 (489)
...+..+.+++.+||..||++|++..++
T Consensus 255 -----~~iP~~L~~LI~rcL~~DP~kR~ss~ee 282 (932)
T PRK13184 255 -----REIPPFLSQIAMKALAVDPAERYSSVQE 282 (932)
T ss_pred -----ccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0112358899999999999999987643
No 195
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.2e-42 Score=338.30 Aligned_cols=270 Identities=38% Similarity=0.711 Sum_probs=213.6
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH-HHHHHHHHHHHHHHHhC-CCCCcccccceeecCc
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-RKKLHRADMEKVILTML-DHPFLPTLYAEFEASH 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 162 (489)
+|++.+.||+|+||.||+|+..... .++..||+|++....... .....++..|+.++..+ +|+||++++++++.+.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~--~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGH--DSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCC--CCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC
Confidence 4889999999999999999876421 146789999998654332 22345567799999999 5999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.+|+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||++....
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 79 KLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred eEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 999999999999999988765 568899999999999999999999999999999999999999999999999974321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
...
T Consensus 157 ~~~----------------------------------------------------------------------------- 159 (290)
T cd05613 157 EDE----------------------------------------------------------------------------- 159 (290)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred ccCCccccCCCCccCcchhcCC--CCCCcccHHHHHHHHHHHhhCCCCCCCCCc----HHHHHHHhcCCCCCCCCCCCCc
Q 011302 323 NARSKSFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLYGTTPFKGENN----EKTLINILKKPLTFPRIGVSSS 396 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~ 396 (489)
........|+..|+|||.+.+. .++.++|||||||++|+|++|..||..... .+....+......+|..
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 234 (290)
T cd05613 160 VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE----- 234 (290)
T ss_pred ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCcc-----
Confidence 0011234688999999998753 467899999999999999999999975432 22223333332222221
Q ss_pred hhHHHHhhHHHHHHHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc
Q 011302 397 KEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 397 ~~~~~~~~l~~li~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~ 444 (489)
....+.+|+.+||..||++|++.. ..+++++.||||+.++|+.+
T Consensus 235 ----~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~ 279 (290)
T cd05613 235 ----MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDL 279 (290)
T ss_pred ----CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHH
Confidence 112488999999999999999653 45679999999999999876
No 196
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.1e-42 Score=335.97 Aligned_cols=261 Identities=23% Similarity=0.362 Sum_probs=206.6
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHH---HHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA---LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
+|+..+.||+|+||.||+|.+.. +++.||+|++.... .........+..|+.+++.++|+||+++++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVK-----TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcC-----CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC
Confidence 47788999999999999999866 56789999987432 12223456778899999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC-cEEEcccCCCcc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG-HIMLSDFDLSFK 240 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~-~vkl~DFG~a~~ 240 (489)
+..++||||++|++|.+++... +.+++..+..++.||+.||.|||++|++||||||+||+++.++ .+||+|||++..
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999999999998765 5689999999999999999999999999999999999998776 599999999743
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
......
T Consensus 154 ~~~~~~-------------------------------------------------------------------------- 159 (268)
T cd06630 154 LAAKGT-------------------------------------------------------------------------- 159 (268)
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 321000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHH---HHhcCCCCCCCCCCCCch
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI---NILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~---~i~~~~~~~p~~~~~~~~ 397 (489)
..........||..|+|||.+.+..++.++|||||||++|+|++|..||.......... ++...... +....
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~---- 234 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTA-PSIPE---- 234 (268)
T ss_pred cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCC-CCCch----
Confidence 00001123468999999999998889999999999999999999999997554332222 22211111 11110
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcC
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
....++.++|.+||..+|++||++. ++++||||+
T Consensus 235 --~~~~~~~~~i~~~l~~~p~~R~~~~----~ll~~~~~~ 268 (268)
T cd06630 235 --HLSPGLRDVTLRCLELQPEDRPPSR----ELLKHPVFR 268 (268)
T ss_pred --hhCHHHHHHHHHHcCCCcccCcCHH----HHhcCcccC
Confidence 1223589999999999999999997 999999995
No 197
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=355.41 Aligned_cols=251 Identities=27% Similarity=0.429 Sum_probs=206.9
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEee
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEY 170 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 170 (489)
+||+|+||+||.|+++. ++...|||-+.... .+..+-+.+|+.+.+.|.|.|||+++|++..++++-|.||-
T Consensus 582 VLGKGTYG~VYA~RD~~-----tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEq 653 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMD-----TQVRIAIKEIPEKD---SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQ 653 (1226)
T ss_pred EeecCceeEEEeecccc-----ceeEEEeeeccccc---chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeec
Confidence 69999999999999998 57788999986543 23445577799999999999999999999999999999999
Q ss_pred cCCCchHHHHHhCCCCCC--ChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEec-cCCcEEEcccCCCcccccCccc
Q 011302 171 CPGGDLYAARQRQPGKRF--GISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVR-EDGHIMLSDFDLSFKCDVVPKL 247 (489)
Q Consensus 171 ~~gg~L~~~l~~~~~~~l--~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~-~~~~vkl~DFG~a~~~~~~~~~ 247 (489)
++||+|.++++... +++ .+..+-+|..||++||.|||++.|||||||-+|+||+ -.|.+||+|||.++++.-.
T Consensus 654 VPGGSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi--- 729 (1226)
T KOG4279|consen 654 VPGGSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI--- 729 (1226)
T ss_pred CCCCcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC---
Confidence 99999999998765 566 7788899999999999999999999999999999997 5799999999998654321
Q ss_pred cCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCc
Q 011302 248 LRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSK 327 (489)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (489)
+.-+.
T Consensus 730 ---------------------------------------------------------------------------nP~TE 734 (1226)
T KOG4279|consen 730 ---------------------------------------------------------------------------NPCTE 734 (1226)
T ss_pred ---------------------------------------------------------------------------Ccccc
Confidence 23356
Q ss_pred cccCCCCccCcchhcCC--CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHH-HHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 328 SFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK-TLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 328 ~~~Gt~~y~aPE~l~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
++.||..|||||+|... +|+.++|||||||++.||.||++||......+ .+.++-.-....| +.. +...+
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~-iPe------elsae 807 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPP-IPE------ELSAE 807 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCC-CcH------HHHHH
Confidence 78899999999999754 48999999999999999999999997655433 3333322111111 111 12236
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
++.||.+|++.||.+||++. ++|++||++.-
T Consensus 808 ak~FilrcFepd~~~R~sA~----~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 808 AKNFILRCFEPDPCDRPSAK----DLLQDPFLQHN 838 (1226)
T ss_pred HHHHHHHHcCCCcccCccHH----HhccCcccccC
Confidence 89999999999999999998 99999999754
No 198
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-44 Score=323.50 Aligned_cols=262 Identities=24% Similarity=0.337 Sum_probs=210.8
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceee
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFE 159 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~ 159 (489)
...++.+++..||.|+.|.||+++.+. ++...|||.+.+.... +...++.+.+.++.+.+ +|+||+.+|+|.
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs-----~~~iiAVK~M~rt~Nk--ee~kRILmDldvv~~s~dcpyIV~c~GyFi 161 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRS-----TGHIIAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVQCFGYFI 161 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcc-----cceEEEEEeecccCCH--HHHHHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence 345677888999999999999999998 6789999999876543 44566777777666554 899999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
.+..+++.||.| +..+..++++.. ++++|..+-.+...++.||.||-+ +||||||+||.|||+|+.|++||||||++
T Consensus 162 ~n~dV~IcMelM-s~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIs 239 (391)
T KOG0983|consen 162 TNTDVFICMELM-STCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGIS 239 (391)
T ss_pred eCchHHHHHHHH-HHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeeccccc
Confidence 999999999999 566666666653 679998889999999999999996 48999999999999999999999999998
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
-++....
T Consensus 240 GrlvdSk------------------------------------------------------------------------- 246 (391)
T KOG0983|consen 240 GRLVDSK------------------------------------------------------------------------- 246 (391)
T ss_pred ceeeccc-------------------------------------------------------------------------
Confidence 4332110
Q ss_pred ccccccCCccccCCCCccCcchhcCC---CCCCcccHHHHHHHHHHHhhCCCCCCCC-CcHHHHHHHhcCCCCCCCCCCC
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQ---GHGSAVDWWTLGVFLYEMLYGTTPFKGE-NNEKTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~p~~~~~ 394 (489)
-.+...|.+.|||||.+.-. .|+.++||||||+.|+||.||+.||.+. .+.+++.++++... |.....
T Consensus 247 ------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP--P~L~~~ 318 (391)
T KOG0983|consen 247 ------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP--PLLPGH 318 (391)
T ss_pred ------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC--CCCCcc
Confidence 01223689999999999643 5899999999999999999999999985 45677778877433 222111
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
. . ..+++++|+..||.+|+.+||... +||+|||+..++
T Consensus 319 ~--g--FSp~F~~fv~~CL~kd~r~RP~Y~----~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 319 M--G--FSPDFQSFVKDCLTKDHRKRPKYN----KLLEHPFIKRYE 356 (391)
T ss_pred c--C--cCHHHHHHHHHHhhcCcccCcchH----HHhcCcceeecc
Confidence 0 0 223589999999999999999998 999999997653
No 199
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.3e-42 Score=338.34 Aligned_cols=259 Identities=27% Similarity=0.413 Sum_probs=205.4
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeec
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA 160 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~ 160 (489)
..++|.+.+.||+|+||.||+|.... .++.||+|++..... ....+..|+.+++.+ +||||+++++++..
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~-----~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKK-----DGSLAAVKILDPISD----VDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECC-----CCCEEEEEEeccccc----HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 45889999999999999999999876 577899999865321 123455688888888 79999999999864
Q ss_pred C-----ceEEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEc
Q 011302 161 S-----HYSCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 161 ~-----~~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
. ...|+||||++||+|.++++.. ....+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEe
Confidence 3 4689999999999999887642 23578999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||++......
T Consensus 171 dfg~~~~~~~~--------------------------------------------------------------------- 181 (291)
T cd06639 171 DFGVSAQLTST--------------------------------------------------------------------- 181 (291)
T ss_pred ecccchhcccc---------------------------------------------------------------------
Confidence 99987332100
Q ss_pred CccccccccccCCccccCCCCccCcchhcCC-----CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISGQ-----GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 388 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~ 388 (489)
........|+..|+|||++... .++.++|||||||++|||++|+.||...+....+..+.......
T Consensus 182 ---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 252 (291)
T cd06639 182 ---------RLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPT 252 (291)
T ss_pred ---------cccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCC
Confidence 0001123588999999998653 26789999999999999999999998877666666655432211
Q ss_pred CCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcC
Q 011302 389 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 389 p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
.... . .....+.+||.+||..+|++||++. ++++||||+
T Consensus 253 --~~~~--~--~~~~~l~~li~~~l~~~p~~Rps~~----~il~~~~~~ 291 (291)
T cd06639 253 --LLHP--E--KWCRSFNHFISQCLIKDFEARPSVT----HLLEHPFIK 291 (291)
T ss_pred --CCcc--c--ccCHHHHHHHHHHhhcChhhCcCHH----HHhcCcccC
Confidence 0000 0 1112589999999999999999987 999999995
No 200
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=5.8e-43 Score=341.17 Aligned_cols=263 Identities=27% Similarity=0.383 Sum_probs=206.4
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++++.||.|+||.||+|++.. ++..||||.+..+... ......+..|+.+++.++||||+++++++.+++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 74 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKL-----TGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 74 (284)
T ss_pred CceeeeeecCCCceEEEEEEECC-----CCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcE
Confidence 48899999999999999999876 5678999988654321 12234567799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+. ++|..++.......+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++......
T Consensus 75 ~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 75 YLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred EEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999995 68988887766677999999999999999999999999999999999999999999999999987322100
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 154 ------------------------------------------------------------------------------~~ 155 (284)
T cd07860 154 ------------------------------------------------------------------------------VR 155 (284)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC-----------------
Q 011302 325 RSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL----------------- 386 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~----------------- 386 (489)
......+++.|+|||++.+.. ++.++|||||||++|||++|..||.+.+..+...++.....
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYK 235 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHH
Confidence 011224688999999987755 58899999999999999999999988776655544432110
Q ss_pred -CCCCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 387 -TFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 387 -~~p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.++......... ......+++||.+||+.||.+||++. ++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~----~~l~~~~f 284 (284)
T cd07860 236 PSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAK----AALAHPFF 284 (284)
T ss_pred hhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHH----HHhcCCCC
Confidence 011110000000 01123578999999999999999987 99999998
No 201
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.7e-43 Score=343.10 Aligned_cols=256 Identities=27% Similarity=0.416 Sum_probs=208.0
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
+.|.....||+|+||.||+|.+.. ++..||||.+..... .....+.+|+.+++.++||||+++++.+..++.
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~ 93 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKH-----TGKQVAVKKMDLRKQ---QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDE 93 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECC-----CCCEEEEEEEecchH---HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCe
Confidence 345556779999999999999875 567899999865432 233456779999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||+++++|.+++.. ..+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 94 ~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (292)
T cd06658 94 LWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK 170 (292)
T ss_pred EEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccc
Confidence 9999999999999988754 4589999999999999999999999999999999999999999999999998732110
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 171 ~------------------------------------------------------------------------------~ 172 (292)
T cd06658 171 E------------------------------------------------------------------------------V 172 (292)
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC-CCCCCCCCCchhHHHH
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL-TFPRIGVSSSKEFEEV 402 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~ 402 (489)
.......|++.|+|||.+.+..++.++|||||||++|||++|..||.+.+....+..+..... ..+... ...
T Consensus 173 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 245 (292)
T cd06658 173 PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSH-------KVS 245 (292)
T ss_pred ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcccccc-------ccC
Confidence 011234689999999999988899999999999999999999999988776665555443211 111100 112
Q ss_pred hhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
..+.+||.+||..||.+||++. ++++||||+..
T Consensus 246 ~~~~~li~~~l~~~P~~Rpt~~----~il~~~~~~~~ 278 (292)
T cd06658 246 SVLRGFLDLMLVREPSQRATAQ----ELLQHPFLKLA 278 (292)
T ss_pred HHHHHHHHHHccCChhHCcCHH----HHhhChhhhcc
Confidence 2588999999999999999987 99999999864
No 202
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.4e-42 Score=333.02 Aligned_cols=251 Identities=26% Similarity=0.448 Sum_probs=207.6
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++.+.||+|+||.||+|++.. +++.||+|.++..... .....+..|+.+++.++||||+++++++.+++.+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~-----~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 73 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVN-----SDQKYAMKEIRLPKSS--SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHL 73 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcC-----CCceEEEEEEEcCcch--HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEE
Confidence 58899999999999999999876 5678999998643221 2345666799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+++|+|.+++....+..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||+++.....
T Consensus 74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 99999999999999887655567899999999999999999999999999999999999999999999999987432110
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 154 ------------------------------------------------------------------------------~~ 155 (255)
T cd08219 154 ------------------------------------------------------------------------------GA 155 (255)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......+..+....... .. ...
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~ 227 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPS--HY------SYE 227 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCc--cc------CHH
Confidence 1123468899999999999889999999999999999999999999887766666665543321111 11 124
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
+.+||.+||+.||++||++. +++.
T Consensus 228 ~~~li~~~l~~~P~~Rp~~~----~il~ 251 (255)
T cd08219 228 LRSLIKQMFKRNPRSRPSAT----TILS 251 (255)
T ss_pred HHHHHHHHHhCCcccCCCHH----HHhh
Confidence 88999999999999999987 7665
No 203
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4.6e-43 Score=342.09 Aligned_cols=263 Identities=27% Similarity=0.370 Sum_probs=206.2
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|.+++ .++.||+|++.+..... .....+.+|+.+++.++||||+++++++.+++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 74 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKE-----TGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKR 74 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECC-----CCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCe
Confidence 479999999999999999999876 46789999986543221 233456679999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||++++.|..+.... ..+++.+++.++.||+.||+|||+.||+||||+|+||+++.++.++|+|||++.....
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 75 LYLVFEFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred EEEEEecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 99999999999888776543 4589999999999999999999999999999999999999999999999999743211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 153 ~------------------------------------------------------------------------------~ 154 (286)
T cd07846 153 P------------------------------------------------------------------------------G 154 (286)
T ss_pred C------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC----------------
Q 011302 324 ARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL---------------- 386 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------- 386 (489)
.......|+..|+|||++.+. .++.++|||||||++|||++|.+||.+....+.+..+.....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLF 234 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHh
Confidence 011224578999999998764 468899999999999999999999987776554444432100
Q ss_pred ---CCCCCCCCCch---hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 387 ---TFPRIGVSSSK---EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 387 ---~~p~~~~~~~~---~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..+........ .......+.+||.+||..+|++||++. ++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~----~il~~~~~ 286 (286)
T cd07846 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSS----QLLHHEFF 286 (286)
T ss_pred hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHH----HHhcCCCC
Confidence 11110000000 001123588999999999999999997 99999998
No 204
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-44 Score=304.86 Aligned_cols=265 Identities=24% Similarity=0.394 Sum_probs=213.8
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
.|.-.++||+|+||+||+|+.++ +.+.||+|.++.+... +.......+|+.+|+.+.|.|||+++++...++.+
T Consensus 3 ~ydkmekigegtygtvfkarn~~-----t~eivalkrvrldddd-egvpssalreicllkelkhknivrl~dvlhsdkkl 76 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRE-----THEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL 76 (292)
T ss_pred chHHHHhhcCCcceeeEecccCC-----ccceEEEEEEeccCCC-CCCcHHHHHHHHHHHHhhhcceeehhhhhccCcee
Confidence 46667899999999999999988 6789999999865432 23445677899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
-+|+||| ..+|..+.... .+.++.+.++.++.|++.||.|+|++++.||||||.|+||+.+|.+||+|||+|+.+...
T Consensus 77 tlvfe~c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 77 TLVFEFC-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred EEeHHHh-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 9999999 67887776654 367999999999999999999999999999999999999999999999999998654321
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
-.
T Consensus 155 vr------------------------------------------------------------------------------ 156 (292)
T KOG0662|consen 155 VR------------------------------------------------------------------------------ 156 (292)
T ss_pred eE------------------------------------------------------------------------------
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHh-hCCCCCCCCCcHHHHHHHhcC-----CCCCCCCCC----
Q 011302 325 RSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK-----PLTFPRIGV---- 393 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~~~-----~~~~p~~~~---- 393 (489)
-...-+-|.+|++|.++.|.. |++..|+||.|||+.|+. .|++.|.|.+..+++.+|... .-.+|....
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdy 236 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDY 236 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCC
Confidence 011225789999999999987 799999999999999999 599999999998888887541 112221110
Q ss_pred ------CCchhHHH-Hh----hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 394 ------SSSKEFEE-VV----KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 394 ------~~~~~~~~-~~----~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
+....|.. .+ .-+||++++|..+|..|++++ ++++||||...
T Consensus 237 k~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisae----aalqhpyf~d~ 289 (292)
T KOG0662|consen 237 KPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAE----AALQHPYFSDF 289 (292)
T ss_pred cccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHH----HHhcCcccccc
Confidence 00011111 11 347999999999999999997 99999999764
No 205
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=9.2e-43 Score=344.33 Aligned_cols=269 Identities=28% Similarity=0.355 Sum_probs=208.1
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|++.+.||+|+||.||+|.++. ++..||+|.+..+... ........+|+.+++.++|+||+++++++...
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 78 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTT-----SGEIVALKKVRMDNER-DGIPISSLREITLLLNLRHPNIVELKEVVVGK 78 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECC-----CCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCCCCCCcceEEEEecC
Confidence 45789999999999999999999886 5788999998754321 11122345699999999999999999998754
Q ss_pred --ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 162 --HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 162 --~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
+.+|+||||+. ++|.+++.... ..+++.++..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.
T Consensus 79 ~~~~~~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~ 156 (309)
T cd07845 79 HLDSIFLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLAR 156 (309)
T ss_pred CCCeEEEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceee
Confidence 57899999995 58888876542 568999999999999999999999999999999999999999999999999974
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
......
T Consensus 157 ~~~~~~-------------------------------------------------------------------------- 162 (309)
T cd07845 157 TYGLPA-------------------------------------------------------------------------- 162 (309)
T ss_pred ecCCcc--------------------------------------------------------------------------
Confidence 321100
Q ss_pred cccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC------------
Q 011302 320 EPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL------------ 386 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 386 (489)
.......+++.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+..+.+..+.....
T Consensus 163 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 163 ----KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred ----CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence 00111245788999999876 4578999999999999999999999998887777666543110
Q ss_pred -------CCCCCCCCCch-hH-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 387 -------TFPRIGVSSSK-EF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 387 -------~~p~~~~~~~~-~~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
..+........ .+ .....+.+||.+||..||++||++. +++.||||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~----~il~h~~f~~~~ 297 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAE----EALESSYFKEKP 297 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHH----HHhcChhhccCC
Confidence 00000000000 00 0134578999999999999999987 999999998644
No 206
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=9.8e-43 Score=338.75 Aligned_cols=256 Identities=23% Similarity=0.287 Sum_probs=207.9
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|.+.+.||+|+||.||+|.+.+.........||||.+...... .....+.+|+.+|+.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN--DARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH--HHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 4679999999999999999999876433345688999998754222 23456778999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCC------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcE
Q 011302 163 YSCLVMEYCPGGDLYAARQRQP------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHI 230 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~v 230 (489)
..|+||||++||+|.+++.... ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 9999999999999999987542 2457888999999999999999999999999999999999999999
Q ss_pred EEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCcc
Q 011302 231 MLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQE 310 (489)
Q Consensus 231 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (489)
||+|||+++.......
T Consensus 162 kl~d~g~~~~~~~~~~---------------------------------------------------------------- 177 (280)
T cd05049 162 KIGDFGMSRDVYTTDY---------------------------------------------------------------- 177 (280)
T ss_pred EECCcccceecccCcc----------------------------------------------------------------
Confidence 9999999743210000
Q ss_pred ccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCC
Q 011302 311 LLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFP 389 (489)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p 389 (489)
........+++.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+..+....+
T Consensus 178 ------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 245 (280)
T cd05049 178 ------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQR 245 (280)
T ss_pred ------------eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence 000112246788999999999999999999999999999998 9999998888777777765543332
Q ss_pred CCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 390 RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
... . ...+.+||.+||..||++||++.
T Consensus 246 ~~~--~------~~~~~~li~~~l~~~p~~Rp~~~ 272 (280)
T cd05049 246 PRT--C------PSEVYDIMLGCWKRDPQQRINIK 272 (280)
T ss_pred CCC--C------CHHHHHHHHHHcCCCcccCCCHH
Confidence 211 1 12589999999999999999987
No 207
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2e-42 Score=337.78 Aligned_cols=258 Identities=26% Similarity=0.412 Sum_probs=202.5
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceee-
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE- 159 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~- 159 (489)
..++|++.+.||+|+||.||+|.+.. .++.||+|++...... ...+..|+.+++.+ +||||+++++++.
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~-----~~~~~~ik~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKK-----NGSKAAVKILDPIHDI----DEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECC-----CCceeEEEeeccccch----HHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 45899999999999999999999876 4678999998653211 23456688889998 6999999999873
Q ss_pred ----cCceEEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEc
Q 011302 160 ----ASHYSCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 160 ----~~~~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
.++..|+||||++|++|.+++... ....+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEc
Confidence 456799999999999999887532 23568889999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||+++.....
T Consensus 167 dfg~~~~~~~~--------------------------------------------------------------------- 177 (286)
T cd06638 167 DFGVSAQLTST--------------------------------------------------------------------- 177 (286)
T ss_pred cCCceeecccC---------------------------------------------------------------------
Confidence 99997432110
Q ss_pred CccccccccccCCccccCCCCccCcchhcC-----CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 388 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~ 388 (489)
........|++.|+|||++.. ..++.++|||||||++|||++|+.||........+..+.....
T Consensus 178 ---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~-- 246 (286)
T cd06638 178 ---------RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPP-- 246 (286)
T ss_pred ---------CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCC--
Confidence 000122358999999999853 4478899999999999999999999987766554444333211
Q ss_pred CCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 389 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 389 p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+....+. .....+.+||.+||+.||++||++. +|++|+||
T Consensus 247 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~----ell~~~~~ 286 (286)
T cd06638 247 PTLHQPE----LWSNEFNDFIRKCLTKDYEKRPTVS----DLLQHVFI 286 (286)
T ss_pred CcccCCC----CcCHHHHHHHHHHccCCcccCCCHH----HHhhcccC
Confidence 1111110 0112489999999999999999987 99999997
No 208
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.1e-42 Score=339.71 Aligned_cols=266 Identities=28% Similarity=0.359 Sum_probs=208.7
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHH--HHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA--IRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
+|.+.+.||+|+||.||+|.+.. .++.||||.+...... .......+..|+.+++.++|+||+++++++.+.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKE-----TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECC-----CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC
Confidence 48889999999999999999876 4678999999765432 1122344567999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+ +|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.+.
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 999999999 999999987653 369999999999999999999999999999999999999999999999999974322
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
...
T Consensus 154 ~~~----------------------------------------------------------------------------- 156 (298)
T cd07841 154 SPN----------------------------------------------------------------------------- 156 (298)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC-----CCCC-----
Q 011302 323 NARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT-----FPRI----- 391 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-----~p~~----- 391 (489)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||.+.+..+.+.++...... ++..
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (298)
T cd07841 157 -RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD 235 (298)
T ss_pred -ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccc
Confidence 00112246788999999865 45789999999999999999999999887766655554321000 0000
Q ss_pred -------CCCCch--hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 392 -------GVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 392 -------~~~~~~--~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
...... .......+.+||.+||.+||++||++. +++.|+||++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~----e~l~~~~~~~~ 288 (298)
T cd07841 236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITAR----QALEHPYFSND 288 (298)
T ss_pred cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHH----HHhhCccccCC
Confidence 000000 001234588999999999999999987 99999999874
No 209
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.2e-42 Score=340.24 Aligned_cols=263 Identities=28% Similarity=0.427 Sum_probs=201.9
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++.+.||+|+||.||+|.++. .++.||||.+...... .....+.+|+.+++.++||||+++++++.+++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 76 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKL-----TGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKK 76 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcC-----CCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCC
Confidence 4789999999999999999999875 4678999998754321 12234557999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+. ++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 77 ~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 154 (291)
T cd07844 77 TLTLVFEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKS 154 (291)
T ss_pred eEEEEEecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccC
Confidence 9999999996 59998887653 468999999999999999999999999999999999999999999999999873211
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
...
T Consensus 155 ~~~----------------------------------------------------------------------------- 157 (291)
T cd07844 155 VPS----------------------------------------------------------------------------- 157 (291)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 000
Q ss_pred ccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCC-cHHHHHHHhc---CC------------
Q 011302 323 NARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGEN-NEKTLINILK---KP------------ 385 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~-~~~~~~~i~~---~~------------ 385 (489)
.......++..|+|||++.+ ..++.++|||||||++|||++|..||.+.. ..+.+..+.. .+
T Consensus 158 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 158 -KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred -ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 00011246789999999876 457899999999999999999999997765 2222222211 00
Q ss_pred ----CCCCCCCCCC----chhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 386 ----LTFPRIGVSS----SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 386 ----~~~p~~~~~~----~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..++...... .........+.+||.+||+.+|++||++. +++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~----e~l~~~~f 291 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAA----EAMKHPYF 291 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHH----HHhcCCCC
Confidence 0000000000 00001113578999999999999999987 99999998
No 210
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2e-42 Score=334.93 Aligned_cols=257 Identities=30% Similarity=0.461 Sum_probs=206.5
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeecC
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEAS 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~ 161 (489)
.++|++.+.||+|+||.||+|.++. .++.|++|++..... ....+.+|+.+++++ +|+||+++++++...
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKK-----TGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKK 75 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECC-----CCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEec
Confidence 4789999999999999999999876 467899999876532 224567799999998 699999999999654
Q ss_pred c------eEEEEEeecCCCchHHHHHhCC--CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEc
Q 011302 162 H------YSCLVMEYCPGGDLYAARQRQP--GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 162 ~------~~~lV~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
. .+|+||||+++++|.+++.... ...+++..+..++.|++.||.|||++||+|+||+|+||+++.++.+||+
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 76 NPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred CCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEEC
Confidence 4 5899999999999999886543 4679999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||++......
T Consensus 156 d~~~~~~~~~~--------------------------------------------------------------------- 166 (275)
T cd06608 156 DFGVSAQLDST--------------------------------------------------------------------- 166 (275)
T ss_pred CCccceecccc---------------------------------------------------------------------
Confidence 99987322100
Q ss_pred CccccccccccCCccccCCCCccCcchhcC-----CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISG-----QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 388 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~ 388 (489)
........|++.|+|||++.. ..++.++|||||||++|+|++|..||...........+......
T Consensus 167 ---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 236 (275)
T cd06608 167 ---------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP- 236 (275)
T ss_pred ---------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC-
Confidence 001123368999999999864 33678999999999999999999999877666666665544221
Q ss_pred CCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 389 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 389 p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
... ... .....+++||.+||..||++||++. ++++|||+
T Consensus 237 -~~~--~~~--~~~~~~~~li~~~l~~dp~~Rpt~~----~ll~~~~~ 275 (275)
T cd06608 237 -TLK--SPE--NWSKKFNDFISECLIKNYEQRPFME----ELLEHPFI 275 (275)
T ss_pred -CCC--chh--hcCHHHHHHHHHHhhcChhhCcCHH----HHhcCCCC
Confidence 111 111 1123589999999999999999997 99999996
No 211
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-44 Score=350.14 Aligned_cols=261 Identities=32% Similarity=0.457 Sum_probs=220.5
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEE
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
.+.||+|.||+||-|+++. +++.||||++.+.....++ ..++.+|+.||+.++||.||.|-..|+..+.+++||
T Consensus 569 devLGSGQFG~VYgg~hRk-----tGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVM 642 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRK-----TGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVM 642 (888)
T ss_pred HhhccCCcceeeecceecc-----cCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEe
Confidence 4689999999999999998 6889999999887665333 366778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC---CcEEEcccCCCcccccCc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED---GHIMLSDFDLSFKCDVVP 245 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~---~~vkl~DFG~a~~~~~~~ 245 (489)
|-+ .|++.+.+-....++|++...++++.||+.||+|||-+||+|.||||||||+... -.+||||||+|+....
T Consensus 643 EKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE-- 719 (888)
T KOG4236|consen 643 EKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE-- 719 (888)
T ss_pred hhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecch--
Confidence 999 6777777666666899999999999999999999999999999999999999754 3699999999964321
Q ss_pred cccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccC
Q 011302 246 KLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 325 (489)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (489)
...
T Consensus 720 -----------------------------------------------------------------------------ksF 722 (888)
T KOG4236|consen 720 -----------------------------------------------------------------------------KSF 722 (888)
T ss_pred -----------------------------------------------------------------------------hhh
Confidence 123
Q ss_pred CccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhH
Q 011302 326 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKL 405 (489)
Q Consensus 326 ~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l 405 (489)
..+.+|||.|+|||++.+++|+..-|+||+|||+|.-|.|..||..+.+ +-.+|.+..+.+|...+. +...++
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNAaFMyPp~PW~-----eis~~A 795 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNAAFMYPPNPWS-----EISPEA 795 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc--hhHHhhccccccCCCchh-----hcCHHH
Confidence 4577999999999999999999999999999999999999999975543 344555666666654433 334579
Q ss_pred HHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC-cccccc
Q 011302 406 QDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN-WALIRS 446 (489)
Q Consensus 406 ~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~-~~~~~~ 446 (489)
.|||..+|+..-.+|++.. ..+.|||++++. |..|+.
T Consensus 796 idlIn~LLqVkm~kRysvd----k~lsh~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 796 IDLINNLLQVKMRKRYSVD----KSLSHPWLQDYQTWLDLRE 833 (888)
T ss_pred HHHHHHHHHHHHHHhcchH----hhccchhhhcchHHHHHHH
Confidence 9999999999999999997 899999999874 665544
No 212
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.2e-42 Score=332.85 Aligned_cols=250 Identities=21% Similarity=0.339 Sum_probs=205.5
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
.+..++|+++++||+|+||.||+|...+ ...||+|.+...... ...+.+|+.+++.++|+||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~ 71 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYNN------STKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVT 71 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEecC------CceEEEEEccCCchh----HHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 4567899999999999999999998764 356899988754322 345677999999999999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
+.+..|+||||+++|+|.+++.......+++..+..++.|++.||+|||+++++||||||+||+++.++.+||+|||++.
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 151 (261)
T cd05072 72 KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR 151 (261)
T ss_pred CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccce
Confidence 99999999999999999999987666778999999999999999999999999999999999999999999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
......
T Consensus 152 ~~~~~~-------------------------------------------------------------------------- 157 (261)
T cd05072 152 VIEDNE-------------------------------------------------------------------------- 157 (261)
T ss_pred ecCCCc--------------------------------------------------------------------------
Confidence 321100
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+.......+... ...+....
T Consensus 158 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~----- 228 (261)
T cd05072 158 ---YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRMPRMEN----- 228 (261)
T ss_pred ---eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCCCCCC-----
Confidence 000112245678999999998889999999999999999998 99999988777766666543 22222111
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+..+.+||.+||..+|++||++.
T Consensus 229 --~~~~~~~li~~~l~~~p~~Rp~~~ 252 (261)
T cd05072 229 --CPDELYDIMKTCWKEKAEERPTFD 252 (261)
T ss_pred --CCHHHHHHHHHHccCCcccCcCHH
Confidence 112588999999999999999996
No 213
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.2e-42 Score=337.11 Aligned_cols=264 Identities=30% Similarity=0.438 Sum_probs=208.6
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++.+.||+|+||.||+|++.. .+..||+|++...... ......+..|+.+++.++||||+++++++..+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 74 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRE-----TGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGF 74 (286)
T ss_pred CceEEeecccCCCcEEEEEEECC-----CCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCee
Confidence 58999999999999999999876 4678999998764322 12345677899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+ +++|.+++.... ..+++.+++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 75 ~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 75 VLVMEYM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred EEEeccc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 9999999 999999887643 56999999999999999999999999999999999999999999999999997432110
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
. ..
T Consensus 153 ~-----------------------------------------------------------------------------~~ 155 (286)
T cd07832 153 E-----------------------------------------------------------------------------PR 155 (286)
T ss_pred C-----------------------------------------------------------------------------CC
Confidence 0 00
Q ss_pred CCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC-----------------
Q 011302 325 RSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL----------------- 386 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~----------------- 386 (489)
......|+..|+|||++.+.. ++.++|||||||++|||++|.+||.+.+....+..+.....
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYN 235 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhh
Confidence 012236899999999987654 68999999999999999999999988776665554433100
Q ss_pred --CCCCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcC
Q 011302 387 --TFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 387 --~~p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
.++......... ......+.+||.+||..||++||++. ++++||||.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~----~~l~h~~~~ 286 (286)
T cd07832 236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAA----EALRHPYFT 286 (286)
T ss_pred cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHH----HHhhCcCcC
Confidence 011000000000 01224689999999999999999997 999999994
No 214
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.5e-42 Score=349.43 Aligned_cols=262 Identities=28% Similarity=0.396 Sum_probs=204.0
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC-
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~- 161 (489)
.++|++.+.||+|+||.||+|.+.. +++.||||++.+.... .....++.+|+.+++.++||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTV-----TGQNVAIKKLSRPFQN-VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK 88 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECC-----CCCEEEEEecCccccC-hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC
Confidence 4789999999999999999999886 5778999998653221 12334566799999999999999999988643
Q ss_pred -----ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 162 -----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 162 -----~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
...|+||||+ +++|.+.+... +++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus 89 ~~~~~~~~~lv~e~~-~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 89 SLEEFQDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CccccCcEEEEEecc-CCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCc
Confidence 3579999999 56888877542 8899999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+++.....
T Consensus 164 ~~~~~~~~------------------------------------------------------------------------ 171 (353)
T cd07850 164 LARTAGTS------------------------------------------------------------------------ 171 (353)
T ss_pred cceeCCCC------------------------------------------------------------------------
Confidence 98432100
Q ss_pred ccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCC--------
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF-------- 388 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-------- 388 (489)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.++...-...
T Consensus 172 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 172 -------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred -------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 00122358899999999999999999999999999999999999998877655444443210000
Q ss_pred -----------------------CCCCCCCch---hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 389 -----------------------PRIGVSSSK---EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 389 -----------------------p~~~~~~~~---~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
+........ .-.....+++||.+||..||.+||++. ++|.||||+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~----eiL~~~~~~~ 316 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVD----DALQHPYINV 316 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHH----HHhcChhHhh
Confidence 000000000 001123578999999999999999997 9999999984
No 215
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.9e-42 Score=331.72 Aligned_cols=251 Identities=20% Similarity=0.272 Sum_probs=205.1
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
.+...+|.+.+.||+|+||.||+|.+++ .++.||+|++..+... ...+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~ 72 (263)
T cd05052 2 EMERTDITMKHKLGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCT 72 (263)
T ss_pred CCchHHeEEeeecCCcccceEEEEEEec-----CCceEEEEEecCCchH----HHHHHHHHHHHHhCCCCChhheEEEEc
Confidence 3556789999999999999999999886 5678999998754322 345677999999999999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
.+..+|+||||+++++|.+++.......+++..++.++.|++.||+|||++|++||||||+|||++.++.+||+|||++.
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 73 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 99999999999999999999876555668999999999999999999999999999999999999999999999999974
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
......
T Consensus 153 ~~~~~~-------------------------------------------------------------------------- 158 (263)
T cd05052 153 LMTGDT-------------------------------------------------------------------------- 158 (263)
T ss_pred ccccce--------------------------------------------------------------------------
Confidence 321100
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+.... ..+. ....
T Consensus 159 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~-~~~~--- 230 (263)
T cd05052 159 ---YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY-RMER-PEGC--- 230 (263)
T ss_pred ---eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-CCCC-CCCC---
Confidence 000011234678999999999999999999999999999998 999999887776666655431 1111 1111
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..+.+||.+||..||++||++.
T Consensus 231 ---~~~~~~li~~cl~~~p~~Rp~~~ 253 (263)
T cd05052 231 ---PPKVYELMRACWQWNPSDRPSFA 253 (263)
T ss_pred ---CHHHHHHHHHHccCCcccCCCHH
Confidence 13589999999999999999997
No 216
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.5e-42 Score=340.92 Aligned_cols=257 Identities=25% Similarity=0.419 Sum_probs=209.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
..|.....||+|+||.||+|.+.. .++.||+|++...... ....+.+|+.+++.++||||+++++++..++.
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~ 92 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKH-----SGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEE 92 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcC-----CCCEEEEEEEEecccc---hHHHHHHHHHHHHhCCCCchhhhhhheeeCCe
Confidence 445666789999999999999875 5678999998654322 23446679999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||+++++|..++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 93 ~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~ 169 (297)
T cd06659 93 LWVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 169 (297)
T ss_pred EEEEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccc
Confidence 9999999999999887754 4689999999999999999999999999999999999999999999999998732210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 170 ~------------------------------------------------------------------------------~ 171 (297)
T cd06659 170 D------------------------------------------------------------------------------V 171 (297)
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
......+|++.|+|||++.+..++.++|||||||++|||++|+.||...+..+.+..+............ ....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 245 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAH------KISP 245 (297)
T ss_pred ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccC------CCCH
Confidence 0112346899999999999888999999999999999999999999887776666555443222111111 1123
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
.+.++|.+||+.+|++||++. ++++||||...
T Consensus 246 ~l~~~i~~~l~~~P~~Rps~~----~ll~~~~~~~~ 277 (297)
T cd06659 246 VLRDFLERMLTREPQERATAQ----ELLDHPFLLQT 277 (297)
T ss_pred HHHHHHHHHhcCCcccCcCHH----HHhhChhhccC
Confidence 488999999999999999987 99999999753
No 217
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5.1e-42 Score=329.11 Aligned_cols=256 Identities=27% Similarity=0.500 Sum_probs=211.3
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|.+.+.||+|+||.||+|.++. .+..||+|.+....... .....+.+|+.+++.++|+||+++++.+......
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~ 74 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKS-----DSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMKHPNIVTFFASFQENGRL 74 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcC-----CCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeE
Confidence 58899999999999999999987 46779999998754332 2234566799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCc-EEEcccCCCccccc
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGH-IMLSDFDLSFKCDV 243 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~-vkl~DFG~a~~~~~ 243 (489)
|+|+||+++++|.+++....+..+++..+..++.|++.||.|||+++|+|+||||+||+++.++. +||+|||.+.....
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 75 FIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 99999999999999988765556899999999999999999999999999999999999998864 69999998733211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 155 ~------------------------------------------------------------------------------~ 156 (257)
T cd08225 155 S------------------------------------------------------------------------------M 156 (257)
T ss_pred C------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.......|++.|+|||++.+..++.++|+|||||++|||++|..||...+..+....+....... ..... ..
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~------~~ 228 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAP--ISPNF------SR 228 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCC--CCCCC------CH
Confidence 00112358899999999988889999999999999999999999998877766666665543221 11111 12
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.+.++|.+||..+|++||++. ++++||||
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~----~ll~~~~~ 257 (257)
T cd08225 229 DLRSLISQLFKVSPRDRPSIT----SILKRPFL 257 (257)
T ss_pred HHHHHHHHHhccChhhCcCHH----HHhhCCCC
Confidence 589999999999999999987 99999997
No 218
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.7e-42 Score=339.00 Aligned_cols=261 Identities=18% Similarity=0.240 Sum_probs=208.8
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 157 (489)
+.+..++|.+.+.||+|+||.||+|.+...........||+|+++..... .....+.+|+.+++++ +||||++++++
T Consensus 30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 107 (302)
T cd05055 30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS--SEREALMSELKIMSHLGNHENIVNLLGA 107 (302)
T ss_pred ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh--HHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence 45666889999999999999999998754333345678999998754321 2345677899999999 79999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCC
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~ 237 (489)
+...+..|+||||+++|+|.+++.......+++.++..++.|++.||+|||+++|+|+||||+|||++.++.+||+|||+
T Consensus 108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 99999999999999999999998765445589999999999999999999999999999999999999999999999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
++.......
T Consensus 188 ~~~~~~~~~----------------------------------------------------------------------- 196 (302)
T cd05055 188 ARDIMNDSN----------------------------------------------------------------------- 196 (302)
T ss_pred cccccCCCc-----------------------------------------------------------------------
Confidence 743211000
Q ss_pred cccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCc
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSS 396 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~ 396 (489)
........+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+.+.+........+....
T Consensus 197 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 268 (302)
T cd05055 197 -----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEH--- 268 (302)
T ss_pred -----eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCC---
Confidence 000112246788999999999889999999999999999998 99999887766665555543322221111
Q ss_pred hhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 397 KEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 397 ~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
...++.+||.+||..+|++||++.
T Consensus 269 ----~~~~~~~li~~cl~~~p~~Rpt~~ 292 (302)
T cd05055 269 ----APAEIYDIMKTCWDADPLKRPTFK 292 (302)
T ss_pred ----CCHHHHHHHHHHcCCCchhCcCHH
Confidence 112589999999999999999997
No 219
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-42 Score=338.20 Aligned_cols=256 Identities=26% Similarity=0.386 Sum_probs=208.4
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|++++.||+|+||+||+|.+.. .++.||+|++..... ......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 75 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIP-----TGTVMAKKVVHIGAK--SSVRKQILRELQIMHECRSPYIVSFYGAFLNE 75 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcC-----CCcEEEEEEEEecCc--chHHHHHHHHHHHHHHcCCCCcceEeeeEecC
Confidence 34689999999999999999999876 467899998865421 22345677899999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
..+|+||||+++++|.+++... +.+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.++|+|||++..
T Consensus 76 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~ 153 (284)
T cd06620 76 NNICMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGE 153 (284)
T ss_pred CEEEEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccc
Confidence 9999999999999999888764 568999999999999999999997 6899999999999999999999999998732
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
...
T Consensus 154 ~~~----------------------------------------------------------------------------- 156 (284)
T cd06620 154 LIN----------------------------------------------------------------------------- 156 (284)
T ss_pred hhh-----------------------------------------------------------------------------
Confidence 110
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH-----------HHHHHHhcCC-CCC
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE-----------KTLINILKKP-LTF 388 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----------~~~~~i~~~~-~~~ 388 (489)
......+|+..|+|||++.+..++.++|||||||++|+|++|..||...... +.+..+.... ..+
T Consensus 157 ---~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd06620 157 ---SIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL 233 (284)
T ss_pred ---hccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCC
Confidence 0011346899999999998888999999999999999999999999865442 2223333221 111
Q ss_pred CCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 389 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 389 p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
+.. .....+.+||.+||..||++||++. ++++|+||..
T Consensus 234 ~~~--------~~~~~~~~li~~~l~~dp~~Rpt~~----e~~~~~~~~~ 271 (284)
T cd06620 234 PSS--------DFPEDLRDFVDACLLKDPTERPTPQ----QLCAMPPFIQ 271 (284)
T ss_pred Cch--------hcCHHHHHHHHHHhcCCcccCcCHH----HHhcCccccc
Confidence 111 1123589999999999999999997 9999999955
No 220
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3e-42 Score=333.53 Aligned_cols=245 Identities=27% Similarity=0.492 Sum_probs=194.4
Q ss_pred CCceeeeee--ccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHh-CCCCCcccccceeec
Q 011302 84 DHFRLLRRL--GSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM-LDHPFLPTLYAEFEA 160 (489)
Q Consensus 84 ~~y~~~~~l--G~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~ 160 (489)
++|.+.+.+ |+|+||.||++..+. ++..||+|++........ |..+... .+||||++++++|..
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~~~k~~~~~~~~~~--------e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKP-----TQKLFVQKIIKAKNFNAI--------EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcC-----CCcEEEEEEEehhhcchh--------hHHHHHHhhcCCCEEEEEEEEec
Confidence 466666666 999999999999876 577899999976532211 2222222 279999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC-cEEEcccCCCc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG-HIMLSDFDLSF 239 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~-~vkl~DFG~a~ 239 (489)
.+..|+||||++||+|.+++... ..+++.++..++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++.
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 99999999999999999998775 4799999999999999999999999999999999999999988 99999999873
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
....
T Consensus 159 ~~~~---------------------------------------------------------------------------- 162 (267)
T PHA03390 159 IIGT---------------------------------------------------------------------------- 162 (267)
T ss_pred ecCC----------------------------------------------------------------------------
Confidence 2110
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHH-HHHHh---cCCCCCCCCCCCC
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT-LINIL---KKPLTFPRIGVSS 395 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~~i~---~~~~~~p~~~~~~ 395 (489)
.....|+..|+|||++.+..++.++|||||||++|||++|..||........ ...+. ......+.
T Consensus 163 ------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 231 (267)
T PHA03390 163 ------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIK----- 231 (267)
T ss_pred ------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCccc-----
Confidence 0123578999999999998899999999999999999999999986543321 11111 11111111
Q ss_pred chhHHHHhhHHHHHHHHhhcCcccccCC-CCChHHHHcCCCcCC
Q 011302 396 SKEFEEVVKLQDLISKLLVKNPKKRIGS-LKGSVEIKRHEFFKG 438 (489)
Q Consensus 396 ~~~~~~~~~l~~li~~~L~~dP~~R~~~-~~~~~~ll~hp~f~~ 438 (489)
..+..+.+||.+||+.||.+|++. . ++|+||||+.
T Consensus 232 ----~~~~~~~~li~~~l~~~p~~R~~~~~----~~l~h~~~~~ 267 (267)
T PHA03390 232 ----NVSKNANDFVQSMLKYNINYRLTNYN----EIIKHPFLKI 267 (267)
T ss_pred ----ccCHHHHHHHHHHhccChhhCCchHH----HHhcCCcccC
Confidence 122358999999999999999975 5 9999999974
No 221
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.6e-42 Score=333.47 Aligned_cols=258 Identities=24% Similarity=0.305 Sum_probs=207.2
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
++..++|++.+.||+|+||.||+|.++..........||+|.+...... .....+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM--RERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH--HHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 4566899999999999999999999886543445688999998644321 22345667999999999999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCC--------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEE
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQP--------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIM 231 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vk 231 (489)
.....|+||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 9999999999999999999886532 12467888999999999999999999999999999999999999999
Q ss_pred EcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccc
Q 011302 232 LSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQEL 311 (489)
Q Consensus 232 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (489)
|+|||+++.+.....
T Consensus 160 l~dfg~~~~~~~~~~----------------------------------------------------------------- 174 (277)
T cd05032 160 IGDFGMTRDIYETDY----------------------------------------------------------------- 174 (277)
T ss_pred ECCcccchhhccCcc-----------------------------------------------------------------
Confidence 999999743211000
Q ss_pred cCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCC-CCC
Q 011302 312 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPL-TFP 389 (489)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~~p 389 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+..... ..|
T Consensus 175 -----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 243 (277)
T cd05032 175 -----------YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLP 243 (277)
T ss_pred -----------cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCC
Confidence 001122356788999999988889999999999999999998 9999998877766666553321 222
Q ss_pred CCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 390 RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
. .. ...+.+||.+||..+|++||++.
T Consensus 244 ~---~~------~~~~~~li~~~l~~~p~~Rpt~~ 269 (277)
T cd05032 244 E---NC------PDKLLELMRMCWQYNPKMRPTFL 269 (277)
T ss_pred C---CC------CHHHHHHHHHHcCCChhhCCCHH
Confidence 1 11 22589999999999999999987
No 222
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.5e-42 Score=345.35 Aligned_cols=267 Identities=25% Similarity=0.343 Sum_probs=202.8
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC--
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS-- 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-- 161 (489)
++|++.+.||+|+||.||+|.+.. +++.||||++.... ......++.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 77 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKP-----TGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSF 77 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcC-----CCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccc
Confidence 689999999999999999999876 56789999986421 122344566799999999999999999987543
Q ss_pred ---ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 162 ---HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 162 ---~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
...|+||||+. ++|.+++.. ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 78 ~~~~~~~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 78 ESFNDVYIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred cccceEEEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccce
Confidence 35899999994 688877754 46999999999999999999999999999999999999999999999999997
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+.......
T Consensus 154 ~~~~~~~~------------------------------------------------------------------------ 161 (336)
T cd07849 154 RIADPEHD------------------------------------------------------------------------ 161 (336)
T ss_pred eecccccc------------------------------------------------------------------------
Confidence 43211000
Q ss_pred ccccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc---CCCC-------
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---KPLT------- 387 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~~------- 387 (489)
.........||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+....+..+.. .+..
T Consensus 162 ---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
T cd07849 162 ---HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCII 238 (336)
T ss_pred ---ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 0001123468999999998765 4589999999999999999999999987665443332211 0000
Q ss_pred ----------CCCCCCCCch--hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 388 ----------FPRIGVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 388 ----------~p~~~~~~~~--~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.+........ ......++.+||.+||+.||++||++. ++++||||+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~----e~l~hp~~~~~~ 299 (336)
T cd07849 239 SLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVE----EALAHPYLEQYH 299 (336)
T ss_pred chhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHH----HHhcCccccccC
Confidence 0000000000 001134588999999999999999987 999999998763
No 223
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.4e-42 Score=330.72 Aligned_cols=246 Identities=22% Similarity=0.294 Sum_probs=201.7
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++.+.||+|+||.||+|+++. ...+|+|.+...... ...+..|+.+|+.++||||+++++++...+
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~------~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 72 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRA------QIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQK 72 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEecc------CceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCC
Confidence 4679999999999999999998765 356899988654322 234667999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||++||+|.+++.... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 73 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05114 73 PLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVL 151 (256)
T ss_pred CEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccC
Confidence 9999999999999999887543 468899999999999999999999999999999999999999999999999874321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
...
T Consensus 152 ~~~----------------------------------------------------------------------------- 154 (256)
T cd05114 152 DDE----------------------------------------------------------------------------- 154 (256)
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
........++..|+|||++.+..++.++|||||||++|||++ |+.||...+..+.+..+..+...... ...
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~--~~~------ 226 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP--KLA------ 226 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC--CCC------
Confidence 000011235678999999998889999999999999999999 99999998888877777664322111 111
Q ss_pred HhhHHHHHHHHhhcCcccccCCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
...+.+||.+||..||++||++.
T Consensus 227 ~~~~~~li~~c~~~~p~~Rps~~ 249 (256)
T cd05114 227 SMTVYEVMYSCWHEKPEGRPTFA 249 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHH
Confidence 12589999999999999999987
No 224
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.1e-42 Score=346.76 Aligned_cols=271 Identities=20% Similarity=0.308 Sum_probs=205.7
Q ss_pred eeeccC--CceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEE
Q 011302 90 RRLGSG--DIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLV 167 (489)
Q Consensus 90 ~~lG~G--~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 167 (489)
..||.| +||+||+|++.. +++.||+|++....... ...+.+.+|+.+++.++||||++++++|..++..|+|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~-----~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v 77 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTP-----TGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVI 77 (328)
T ss_pred HHhCCcccCceeEEEEEEcC-----CCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEE
Confidence 356666 999999999876 57899999987543221 3346777899999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccc
Q 011302 168 MEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKL 247 (489)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 247 (489)
|||+.+|+|.+++.+.....+++..+..++.||+.||+|||++||+||||||+|||++.++.++++|||.+........
T Consensus 78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~- 156 (328)
T cd08226 78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ- 156 (328)
T ss_pred EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc-
Confidence 9999999999998876445689999999999999999999999999999999999999999999999986521110000
Q ss_pred cCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCc
Q 011302 248 LRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSK 327 (489)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (489)
. .........
T Consensus 157 ---------------------------------------~-------------------------------~~~~~~~~~ 166 (328)
T cd08226 157 ---------------------------------------K-------------------------------AKVVYDFPQ 166 (328)
T ss_pred ---------------------------------------c-------------------------------ccccccccc
Confidence 0 000000001
Q ss_pred cccCCCCccCcchhcCC--CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCC-------------
Q 011302 328 SFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIG------------- 392 (489)
Q Consensus 328 ~~~Gt~~y~aPE~l~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~------------- 392 (489)
...++..|+|||++.+. .++.++|||||||++|||++|..||.+.........+.......|...
T Consensus 167 ~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (328)
T cd08226 167 FSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNS 246 (328)
T ss_pred cccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccc
Confidence 12356779999999774 478999999999999999999999988776665555544322211100
Q ss_pred -------------------------CCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCc
Q 011302 393 -------------------------VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 441 (489)
Q Consensus 393 -------------------------~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~ 441 (489)
............+.+||++||..||++||++. ++++||||+.+.-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~----e~l~~~~~~~~~~ 316 (328)
T cd08226 247 QSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSAS----SLLSHAFFKQVKE 316 (328)
T ss_pred hhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHH----HHhhCHHHHHHHH
Confidence 00001112334689999999999999999997 9999999977543
No 225
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.9e-42 Score=331.46 Aligned_cols=260 Identities=28% Similarity=0.410 Sum_probs=207.2
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHH-------HHHHHHHHHHHHHHHHhCCCCCcccccce
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA-------IRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 157 (489)
+|.+.+.||+|+||.||+|.... +++.||+|.++..... .....+.+..|+.+++.++||||++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~-----~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 76 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVT-----TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGF 76 (272)
T ss_pred ceeecceecccCceEEEEEeecC-----CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence 47888999999999999999876 4678999988642211 12234567789999999999999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCC
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~ 237 (489)
+...+..|+||||++||+|.+++... ..+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||+
T Consensus 77 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 77 ETTEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred eccCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccc
Confidence 99999999999999999999998775 5789999999999999999999999999999999999999999999999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
++......
T Consensus 155 ~~~~~~~~------------------------------------------------------------------------ 162 (272)
T cd06629 155 SKKSDDIY------------------------------------------------------------------------ 162 (272)
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 73321000
Q ss_pred cccccccCCccccCCCCccCcchhcCCC--CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC--CCCCCCCC
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQG--HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP--LTFPRIGV 393 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~ 393 (489)
.........|+..|+|||.+.... ++.++|+|||||++|||++|..||...+......++.... ..++....
T Consensus 163 ----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (272)
T cd06629 163 ----DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVS 238 (272)
T ss_pred ----cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcccc
Confidence 000112345889999999998755 7899999999999999999999997666554444443322 12222111
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
. .....+.+||.+||..+|++||++. ++++||||
T Consensus 239 ~-----~~~~~~~~li~~~l~~~p~~Rps~~----~il~~~~~ 272 (272)
T cd06629 239 M-----NLSPVALDFLNACFTINPDNRPTAR----ELLQHPFI 272 (272)
T ss_pred c-----cCCHHHHHHHHHHhcCChhhCCCHH----HHhhCCCC
Confidence 1 1123589999999999999999987 99999997
No 226
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.2e-42 Score=336.10 Aligned_cols=258 Identities=27% Similarity=0.415 Sum_probs=211.6
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
..|+.++.||+|+||.||+|.+.. .+..||||++...... .....+..|+.+++.++||||+++++++.++..
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNR-----TQQVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTK 76 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEcc-----CCEEEEEEEEeccccH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCE
Confidence 468888999999999999999876 4678999998754322 334567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||++||+|.+++.. ..+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++..+..
T Consensus 77 ~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 77 LWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred EEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence 9999999999999998865 4688999999999999999999999999999999999999999999999999733210
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 154 ~------------------------------------------------------------------------------~ 155 (277)
T cd06640 154 T------------------------------------------------------------------------------Q 155 (277)
T ss_pred C------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.......|+..|+|||++.+..++.++|+|||||++|||++|..||...+.......+.... .+... ...+.
T Consensus 156 ~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~------~~~~~ 227 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN--PPTLT------GEFSK 227 (277)
T ss_pred cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC--CCCCc------hhhhH
Confidence 01122357889999999998889999999999999999999999998877655544432221 11111 11233
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCc
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 441 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~ 441 (489)
.+.+||.+||..+|++||++. ++++|+||.....
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~~~ 261 (277)
T cd06640 228 PFKEFIDACLNKDPSFRPTAK----ELLKHKFIVKNAK 261 (277)
T ss_pred HHHHHHHHHcccCcccCcCHH----HHHhChHhhhcch
Confidence 588999999999999999997 9999999976543
No 227
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-43 Score=353.87 Aligned_cols=253 Identities=23% Similarity=0.364 Sum_probs=204.8
Q ss_pred eeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehH-HHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce--
Q 011302 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDRE-ALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY-- 163 (489)
Q Consensus 87 ~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~-- 163 (489)
+...+||+|+|-+||+|.+... +..||=-.++.. .......++++..|+.+|+.|+|||||++|.+|.+...
T Consensus 43 k~~evLGrGafKtVYka~De~~-----giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEE-----GIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred ehhhhcccccceeeeecccccc-----chhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce
Confidence 4556899999999999999764 333443333322 22334567889999999999999999999999986654
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCC--CeeecCCCCCeEecc-CCcEEEcccCCCcc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMG--IVYRDLKPENVLVRE-DGHIMLSDFDLSFK 240 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDIKp~NILl~~-~~~vkl~DFG~a~~ 240 (489)
+.+|+|++..|+|..++++. ++.....++.|++||+.||.|||++. |||||||++||+|+. -|.|||+|+|+|+.
T Consensus 118 in~iTEL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATL 195 (632)
T ss_pred eeeeeecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHH
Confidence 89999999999999999887 67899999999999999999999986 999999999999985 59999999999954
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
...
T Consensus 196 ~r~----------------------------------------------------------------------------- 198 (632)
T KOG0584|consen 196 LRK----------------------------------------------------------------------------- 198 (632)
T ss_pred hhc-----------------------------------------------------------------------------
Confidence 321
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHH-HHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL-INILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~-~~i~~~~~~~p~~~~~~~~~~ 399 (489)
....+.+|||.|||||++- ..|+..+||||||.++.||+|+..||....+...+ .++..+. ........
T Consensus 199 ---s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi-KP~sl~kV----- 268 (632)
T KOG0584|consen 199 ---SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI-KPAALSKV----- 268 (632)
T ss_pred ---cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC-CHHHhhcc-----
Confidence 1234568999999999998 66999999999999999999999999887766554 4454442 21111111
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
..+++++||.+||.. ..+|+++. |||.||||..-
T Consensus 269 -~dPevr~fIekCl~~-~~~R~sa~----eLL~d~Ff~~d 302 (632)
T KOG0584|consen 269 -KDPEVREFIEKCLAT-KSERLSAK----ELLKDPFFDED 302 (632)
T ss_pred -CCHHHHHHHHHHhcC-chhccCHH----HHhhChhhccc
Confidence 123699999999999 99999998 99999999764
No 228
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=7.2e-43 Score=339.47 Aligned_cols=258 Identities=26% Similarity=0.416 Sum_probs=209.9
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
+.|+..+.||+|+||.||+|.+.. .+..||+|.+...... .....+.+|+.+++.++||||+++++++..+..
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~-----~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNR-----TKEVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTK 76 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcC-----CCeEEEEEEeccccch--HHHHHHHHHHHHHHcCCCCccHhhhcccccCCc
Confidence 457788899999999999999876 4678999998754322 234567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||+++++|.+++.. ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++..+..
T Consensus 77 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 77 LWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred eEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccC
Confidence 9999999999999988764 4689999999999999999999999999999999999999999999999999743211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
. .
T Consensus 154 ~------------------------------------------------------------------------------~ 155 (277)
T cd06642 154 T------------------------------------------------------------------------------Q 155 (277)
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred cCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 324 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.......|+..|+|||++.+..++.++|||||||++|||++|..||...........+.... .+.... ....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~------~~~~ 227 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS--PPTLEG------QYSK 227 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC--CCCCCc------ccCH
Confidence 00112357889999999999889999999999999999999999998766555444333221 111111 1123
Q ss_pred hHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCc
Q 011302 404 KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 441 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~ 441 (489)
.+.+||.+||..+|++||++. ++++||||+...+
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~~~ 261 (277)
T cd06642 228 PFKEFVEACLNKDPRFRPTAK----ELLKHKFITRYTK 261 (277)
T ss_pred HHHHHHHHHccCCcccCcCHH----HHHHhHHHHHHhh
Confidence 588999999999999999987 9999999977554
No 229
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.8e-42 Score=334.74 Aligned_cols=261 Identities=21% Similarity=0.322 Sum_probs=205.3
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|++.+.||+|+||+||+|....... .....||+|.+..... ......+.+|+.+++.++||||+++++++..+
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~~ik~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 79 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGM-DHAQLVAIKTLKDINN--PQQWGEFQQEASLMAELHHPNIVCLLGVVTQE 79 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCC-CCcceEEEEeccCCCC--HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC
Confidence 45789999999999999999998753221 1457899999974322 23345677899999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCC---------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQP---------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE 226 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~---------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~ 226 (489)
...|+||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~ 159 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE 159 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence 99999999999999999885431 124788888999999999999999999999999999999999
Q ss_pred CCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCC
Q 011302 227 DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDH 306 (489)
Q Consensus 227 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (489)
++.+||+|||+++.......
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~------------------------------------------------------------ 179 (283)
T cd05090 160 QLHVKISDLGLSREIYSADY------------------------------------------------------------ 179 (283)
T ss_pred CCcEEeccccccccccCCcc------------------------------------------------------------
Confidence 99999999999843311000
Q ss_pred CCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCC
Q 011302 307 HDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKP 385 (489)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~ 385 (489)
........++..|+|||++.+..++.++|||||||++|||++ |..||.+.+.......+....
T Consensus 180 ----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 243 (283)
T cd05090 180 ----------------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQ 243 (283)
T ss_pred ----------------eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 001122346778999999998889999999999999999998 999998877666655554433
Q ss_pred CCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 386 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 386 ~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
. .+... .. ...+.+||.+||+.||++||++. +|+++
T Consensus 244 ~-~~~~~-~~------~~~~~~li~~cl~~~p~~Rp~~~----~i~~~ 279 (283)
T cd05090 244 L-LPCSE-DC------PPRMYSLMTECWQEGPSRRPRFK----DIHTR 279 (283)
T ss_pred c-CCCCC-CC------CHHHHHHHHHHcccCcccCcCHH----HHHHH
Confidence 2 11111 11 12589999999999999999987 66554
No 230
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=3.5e-42 Score=337.54 Aligned_cols=265 Identities=26% Similarity=0.355 Sum_probs=203.3
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCc
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASH 162 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~ 162 (489)
++|++.+.||+|+||.||+|.+.. +++.||+|.+...... ......+.+|+.+++.+. ||||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKN-----TGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEE 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECC-----CCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecC
Confidence 479999999999999999999886 5788999998654321 122345677999999995 699999999987666
Q ss_pred e-----EEEEEeecCCCchHHHHHhCC---CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc-CCcEEEc
Q 011302 163 Y-----SCLVMEYCPGGDLYAARQRQP---GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE-DGHIMLS 233 (489)
Q Consensus 163 ~-----~~lV~E~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~-~~~vkl~ 233 (489)
. .|+||||+++ +|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+
T Consensus 75 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~ 153 (295)
T cd07837 75 KNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIA 153 (295)
T ss_pred CCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEe
Confidence 5 8999999975 8888776532 246899999999999999999999999999999999999998 8999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||++..+....
T Consensus 154 dfg~~~~~~~~~-------------------------------------------------------------------- 165 (295)
T cd07837 154 DLGLGRAFSIPV-------------------------------------------------------------------- 165 (295)
T ss_pred ecccceecCCCc--------------------------------------------------------------------
Confidence 999974321100
Q ss_pred CccccccccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC-----C
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL-----T 387 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----~ 387 (489)
.......+++.|+|||++.+. .++.++|||||||++|+|++|..||.+.+......++..... .
T Consensus 166 ----------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 166 ----------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred ----------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 001122468899999998764 478999999999999999999999998877665554432100 0
Q ss_pred C------------CCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcC
Q 011302 388 F------------PRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 388 ~------------p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
+ +......... ......+.+||.+||..||.+||++. +++.||||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~----eil~~~~~~ 295 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAK----AALTHPYFD 295 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHH----HHhcCCCcC
Confidence 0 0000000000 01234589999999999999999987 999999995
No 231
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.9e-42 Score=337.00 Aligned_cols=265 Identities=20% Similarity=0.273 Sum_probs=210.4
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 157 (489)
+.+..++|++.+.||+|+||.||+|.+++.........+|+|.+...... ....++.+|+.+++++ +||||++++++
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH--HHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 45667899999999999999999999876433335678999998754222 2335577899999999 79999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhC--------------CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeE
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQ--------------PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVL 223 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NIL 223 (489)
+..++.+|+||||+++|+|..++... ....+++..+..++.|++.||+|||++||+||||||+|||
T Consensus 85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil 164 (293)
T cd05053 85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL 164 (293)
T ss_pred EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence 99999999999999999999998642 2356889999999999999999999999999999999999
Q ss_pred eccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccC
Q 011302 224 VREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVD 303 (489)
Q Consensus 224 l~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (489)
++.++.+||+|||+++.+.....
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~--------------------------------------------------------- 187 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDY--------------------------------------------------------- 187 (293)
T ss_pred EcCCCeEEeCccccccccccccc---------------------------------------------------------
Confidence 99999999999999843321000
Q ss_pred CCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHh
Q 011302 304 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINIL 382 (489)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~ 382 (489)
........++..|+|||++.+..++.++|||||||++|||++ |..||.+....+....+.
T Consensus 188 -------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 248 (293)
T cd05053 188 -------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK 248 (293)
T ss_pred -------------------eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence 000111235678999999999889999999999999999997 999999887776666555
Q ss_pred cCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 383 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 383 ~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
.+. ..+. .... ...+.+|+.+||..||++||++. +++++
T Consensus 249 ~~~-~~~~-~~~~------~~~~~~li~~~l~~~p~~Rps~~----eil~~ 287 (293)
T cd05053 249 EGY-RMEK-PQNC------TQELYHLMRDCWHEVPSQRPTFK----QLVED 287 (293)
T ss_pred cCC-cCCC-CCCC------CHHHHHHHHHHcccCcccCcCHH----HHHHH
Confidence 432 1111 1111 22588999999999999999997 66543
No 232
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.3e-42 Score=336.88 Aligned_cols=262 Identities=19% Similarity=0.258 Sum_probs=208.8
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+...+|++.+.||+|+||.||+|.+..+.....+..||||++..... ......+.+|+.++..++||||+++++++..
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 79 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE--GPLREEFKHEAMMRSRLQHPNIVCLLGVVTK 79 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 34567899999999999999999987643334567899999974421 1234557779999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCC--------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQP--------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE 226 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~ 226 (489)
....++++||+.+++|.+++.... ...+++..+..++.|++.||.|||++||+||||||+|||++.
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 999999999999999999875321 235788889999999999999999999999999999999999
Q ss_pred CCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCC
Q 011302 227 DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDH 306 (489)
Q Consensus 227 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (489)
++.+||+|||+++.......
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~------------------------------------------------------------ 179 (283)
T cd05091 160 KLNVKISDLGLFREVYAADY------------------------------------------------------------ 179 (283)
T ss_pred CCceEecccccccccccchh------------------------------------------------------------
Confidence 99999999999743211000
Q ss_pred CCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCC
Q 011302 307 HDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKP 385 (489)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~ 385 (489)
........+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+....+....
T Consensus 180 ----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~ 243 (283)
T cd05091 180 ----------------YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQ 243 (283)
T ss_pred ----------------eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 001122346789999999988889999999999999999998 999999888877777776654
Q ss_pred CCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 386 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 386 ~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
..... .... ..+.+|+.+||+.+|++||++. +|++
T Consensus 244 ~~~~~--~~~~------~~~~~li~~cl~~~p~~RP~~~----~i~~ 278 (283)
T cd05091 244 VLPCP--DDCP------AWVYTLMLECWNEFPSRRPRFK----DIHS 278 (283)
T ss_pred cCCCC--CCCC------HHHHHHHHHHhCCCcccCCCHH----HHHH
Confidence 32111 1111 2488999999999999999987 6665
No 233
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-41 Score=333.03 Aligned_cols=263 Identities=28% Similarity=0.442 Sum_probs=207.0
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec--C
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA--S 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~ 161 (489)
++|...+.||.|+||.||+|.+.. .++.||+|.+...... ....++.+|+.+++.++||||++++++|.+ .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 73 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKN-----TGMIFALKTITTDPNP--DLQKQILRELEINKSCKSPYIVKYYGAFLDESS 73 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECC-----CCeEEEEEEEecCCch--HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCC
Confidence 478999999999999999999986 5788999998754322 334567779999999999999999998854 4
Q ss_pred ceEEEEEeecCCCchHHHHHh--CCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 162 HYSCLVMEYCPGGDLYAARQR--QPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
+.+|+||||++|++|.+++.. .....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 153 (287)
T cd06621 74 SSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSG 153 (287)
T ss_pred CeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccc
Confidence 478999999999999887654 223568899999999999999999999999999999999999999999999999973
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
....
T Consensus 154 ~~~~---------------------------------------------------------------------------- 157 (287)
T cd06621 154 ELVN---------------------------------------------------------------------------- 157 (287)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 2110
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC-----cHHHHHHHhcCCC-CCCCCCC
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN-----NEKTLINILKKPL-TFPRIGV 393 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~~-~~p~~~~ 393 (489)
.......++..|+|||.+.+..++.++|||||||++|+|++|..||.... ..+....+..... ..+....
T Consensus 158 ----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd06621 158 ----SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPG 233 (287)
T ss_pred ----cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCC
Confidence 00012357888999999999889999999999999999999999998662 2333333333111 1111111
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
. .. .....+.+||.+||..+|.+||++. ++++||||+...
T Consensus 234 ~-~~--~~~~~~~~li~~~l~~~p~~Rpt~~----eil~~~~~~~~~ 273 (287)
T cd06621 234 N-GI--KWSEEFKDFIKQCLEKDPTRRPTPW----DMLEHPWIKAQM 273 (287)
T ss_pred C-CC--chHHHHHHHHHHHcCCCcccCCCHH----HHHhCccccccc
Confidence 0 00 1123589999999999999999997 999999997654
No 234
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.3e-42 Score=333.29 Aligned_cols=256 Identities=31% Similarity=0.431 Sum_probs=209.7
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|.++. .++.||+|.+...... ....++.+|+.+++.++||||+++++++...+.
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 73 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRP-----TGKIMAVKTIRLEINE--AIQKQILRELDILHKCNSPYIVGFYGAFYNNGD 73 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcC-----CCcEEEEEEEecccCh--HHHHHHHHHHHHHHHCCCCchhhhheeeecCCE
Confidence 468888999999999999999886 5788999998765322 334567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
+|+||||+++++|.+++.... ..+++..+..++.|++.||+|||+ .|++||||||+||+++.++.++|+|||++....
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~ 152 (265)
T cd06605 74 ISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV 152 (265)
T ss_pred EEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence 999999999999999987653 578999999999999999999999 999999999999999999999999999873221
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
.
T Consensus 153 ~------------------------------------------------------------------------------- 153 (265)
T cd06605 153 N------------------------------------------------------------------------------- 153 (265)
T ss_pred H-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC-----cHHHHHHHhcCCC-CCCCCCCCCc
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN-----NEKTLINILKKPL-TFPRIGVSSS 396 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~~-~~p~~~~~~~ 396 (489)
.......|+..|+|||.+.+..++.++|||||||++|+|++|..||...+ ..+.+..+..... ..+...
T Consensus 154 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 228 (265)
T cd06605 154 -SLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGK---- 228 (265)
T ss_pred -HHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhh----
Confidence 00011468889999999999999999999999999999999999997652 2233333433211 111110
Q ss_pred hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 397 KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 397 ~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
...++.+||.+||..||++||++. +++.||||+..
T Consensus 229 ----~~~~~~~li~~~l~~~p~~Rpt~~----~ll~~~~~~~~ 263 (265)
T cd06605 229 ----FSPDFQDFVNLCLIKDPRERPSYK----ELLEHPFIKKY 263 (265)
T ss_pred ----cCHHHHHHHHHHcCCCchhCcCHH----HHhhCchhhcc
Confidence 123589999999999999999987 99999999764
No 235
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.4e-42 Score=335.42 Aligned_cols=260 Identities=25% Similarity=0.340 Sum_probs=202.0
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHH-HHHhCCCCCcccccceeecCc
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-ILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~ 162 (489)
++|++.+.||+|+||.||+|+++. +++.||||+++...... . ..++..|.. .++.++||||+++++++..++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~-----~~~~vaiK~~~~~~~~~-~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~ 73 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVP-----TGTIMAVKRIRATVNSQ-E-QKRLLMDLDISMRSVDCPYTVTFYGALFREG 73 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcC-----CCcEEEEEEEecCCCcH-H-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCC
Confidence 479999999999999999999886 57899999987543221 1 122333444 466789999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhC-CCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMM-GIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
..|+||||++ |+|.+++... ....+++..+..++.||+.||+|||++ +++||||||+|||++.++.+||+|||++.
T Consensus 74 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~ 152 (283)
T cd06617 74 DVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISG 152 (283)
T ss_pred cEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 9999999995 7887776542 235689999999999999999999997 99999999999999999999999999973
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.....
T Consensus 153 ~~~~~--------------------------------------------------------------------------- 157 (283)
T cd06617 153 YLVDS--------------------------------------------------------------------------- 157 (283)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 22100
Q ss_pred cccccCCccccCCCCccCcchhcC----CCCCCcccHHHHHHHHHHHhhCCCCCCCCC-cHHHHHHHhcCC-CCCCCCCC
Q 011302 320 EPINARSKSFVGTHEYLAPEVISG----QGHGSAVDWWTLGVFLYEMLYGTTPFKGEN-NEKTLINILKKP-LTFPRIGV 393 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~----~~~~~~~DiwSlGvil~elltG~~Pf~~~~-~~~~~~~i~~~~-~~~p~~~~ 393 (489)
.......|+..|+|||++.+ ..++.++|+|||||++|||++|+.||.... ..+.+..+.... ..++...
T Consensus 158 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (283)
T cd06617 158 ----VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEK- 232 (283)
T ss_pred ----cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccc-
Confidence 00112357889999999865 456889999999999999999999997533 334444443321 2222111
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcc
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 442 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~ 442 (489)
.+.++.+||.+||..+|++||++. +++.||||+...+.
T Consensus 233 -------~~~~l~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~~~~ 270 (283)
T cd06617 233 -------FSPEFQDFVNKCLKKNYKERPNYP----ELLQHPFFELHLSK 270 (283)
T ss_pred -------cCHHHHHHHHHHccCChhhCcCHH----HHhcCchhhhcccc
Confidence 123589999999999999999997 99999999987654
No 236
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1e-41 Score=333.07 Aligned_cols=256 Identities=27% Similarity=0.422 Sum_probs=209.5
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
.|...+.||+|+||.||+|.+.. .++.+++|++...... ....+.+|+.+++.++||||+++++++...+..
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~~iK~~~~~~~~---~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~ 91 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKS-----TGRQVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHPNIVEMYSSYLVGDEL 91 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECC-----CCCEEEEEEEeccchh---HHHHHHHHHHHHHHcCCCChheEEEEEEcCCeE
Confidence 45566799999999999999876 4678999988643322 234467799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+|+||++|++|.+++.. .++++.++..++.|++.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 92 ~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~ 168 (285)
T cd06648 92 WVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE 168 (285)
T ss_pred EEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC
Confidence 999999999999998876 46899999999999999999999999999999999999999999999999986321100
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 169 ------------------------------------------------------------------------------~~ 170 (285)
T cd06648 169 ------------------------------------------------------------------------------VP 170 (285)
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
......|++.|+|||.+.+..++.++|||||||++|||++|..||...+.......+............ .....
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 244 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLH------KVSPR 244 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccc------cCCHH
Confidence 112346899999999999888999999999999999999999999887776666666554221111111 11235
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
+.+||.+||..+|++||++. ++++||||+..
T Consensus 245 l~~li~~~l~~~p~~Rpt~~----~il~~~~~~~~ 275 (285)
T cd06648 245 LRSFLDRMLVRDPAQRATAA----ELLNHPFLAKA 275 (285)
T ss_pred HHHHHHHHcccChhhCcCHH----HHccCcccccC
Confidence 89999999999999999987 99999999774
No 237
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.4e-42 Score=339.21 Aligned_cols=265 Identities=25% Similarity=0.314 Sum_probs=204.7
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCc
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASH 162 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~ 162 (489)
++|...+.||+|+||.||++.++. .++.||+|.+...... .....+..|+.++.++. ||||+++++++..+.
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~-----~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~ 76 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKP-----SGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG 76 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECC-----CCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC
Confidence 567788899999999999999886 5788999998754332 23445677998999986 999999999999999
Q ss_pred eEEEEEeecCCCchHHHH---HhCCCCCCChhhHHHHHHHHHHHHHHHHhC-CCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 163 YSCLVMEYCPGGDLYAAR---QRQPGKRFGISSAKFYAAETLLALEYLHMM-GIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l---~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
..++||||+. ++|.++. .......+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 77 ~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 155 (288)
T cd06616 77 DCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGIS 155 (288)
T ss_pred cEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchh
Confidence 9999999994 5655433 222336799999999999999999999975 9999999999999999999999999997
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
..+...
T Consensus 156 ~~~~~~-------------------------------------------------------------------------- 161 (288)
T cd06616 156 GQLVDS-------------------------------------------------------------------------- 161 (288)
T ss_pred HHhccC--------------------------------------------------------------------------
Confidence 322100
Q ss_pred ccccccCCccccCCCCccCcchhcCC---CCCCcccHHHHHHHHHHHhhCCCCCCCCCcH-HHHHHHhcCCCCCCCCCCC
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQ---GHGSAVDWWTLGVFLYEMLYGTTPFKGENNE-KTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~ 394 (489)
.......|++.|+|||++.+. .++.++|||||||++|||++|+.||...... +.+.++..... |.....
T Consensus 162 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~ 234 (288)
T cd06616 162 -----IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDP--PILSNS 234 (288)
T ss_pred -----CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCC--CcCCCc
Confidence 001122588999999999876 6899999999999999999999999765521 22333332211 111111
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccc
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWAL 443 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~ 443 (489)
........+.+||.+||..||++||++. ++++||||+...|..
T Consensus 235 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~----~i~~~~~~~~~~~~~ 277 (288)
T cd06616 235 --EEREFSPSFVNFINLCLIKDESKRPKYK----ELLEHPFIKDYEERN 277 (288)
T ss_pred --CCCccCHHHHHHHHHHccCChhhCcCHH----HHhcChhhhchhhcc
Confidence 0012233589999999999999999997 999999999876643
No 238
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.3e-42 Score=339.12 Aligned_cols=268 Identities=28% Similarity=0.404 Sum_probs=201.3
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++.+.||+|+||.||+|+++. +++.||||.+...... ......+.+|+.+++.++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 84 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKK-----TKQIVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKA 84 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECC-----CCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEEeccc
Confidence 4689999999999999999999886 5789999998643211 111223456999999999999999999886543
Q ss_pred --------eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcc
Q 011302 163 --------YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSD 234 (489)
Q Consensus 163 --------~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~D 234 (489)
..|+||||+ +++|.+++... ...+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~d 162 (310)
T cd07865 85 TPYNRYKGSFYLVFEFC-EHDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLAD 162 (310)
T ss_pred ccccCCCceEEEEEcCC-CcCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECc
Confidence 459999999 46888777654 24689999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCC
Q 011302 235 FDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDD 314 (489)
Q Consensus 235 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (489)
||++.........
T Consensus 163 fg~~~~~~~~~~~------------------------------------------------------------------- 175 (310)
T cd07865 163 FGLARAFSLSKNS------------------------------------------------------------------- 175 (310)
T ss_pred CCCcccccCCccc-------------------------------------------------------------------
Confidence 9998433210000
Q ss_pred ccccccccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc--CCCC---C
Q 011302 315 PEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK--KPLT---F 388 (489)
Q Consensus 315 ~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~--~~~~---~ 388 (489)
.........++..|+|||.+.+.. ++.++|||||||++|||++|..||.+.+.......+.. +... +
T Consensus 176 -------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (310)
T cd07865 176 -------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVW 248 (310)
T ss_pred -------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence 000112335788999999987654 68899999999999999999999988776544333222 1000 0
Q ss_pred CCCC---------CCC-----ch----hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 389 PRIG---------VSS-----SK----EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 389 p~~~---------~~~-----~~----~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
|... ... .. .......+.+||.+||..||++||++. ++++||||
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~----e~l~h~~f 310 (310)
T cd07865 249 PGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDAD----TALNHDFF 310 (310)
T ss_pred ccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHH----HHhcCCCC
Confidence 0000 000 00 000123578999999999999999997 99999998
No 239
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.8e-42 Score=334.07 Aligned_cols=256 Identities=22% Similarity=0.294 Sum_probs=206.9
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
..+|.+.+.||+|+||.||+|++...........+++|.+....... ...+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA---RKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHH---HHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 46799999999999999999997654444466789999987554332 245667999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCC--------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC
Q 011302 163 YSCLVMEYCPGGDLYAARQRQP--------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG 228 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~ 228 (489)
..++||||+++++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 9999999999999999987542 23488899999999999999999999999999999999999999
Q ss_pred cEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCC
Q 011302 229 HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHD 308 (489)
Q Consensus 229 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (489)
.++|+|||++........
T Consensus 161 ~~~l~dfg~a~~~~~~~~-------------------------------------------------------------- 178 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDY-------------------------------------------------------------- 178 (291)
T ss_pred cEEECCCCcccccCCCce--------------------------------------------------------------
Confidence 999999999843211000
Q ss_pred ccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCC
Q 011302 309 QELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLT 387 (489)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~ 387 (489)
........|+..|+|||++.+..++.++|||||||++|||++ |..||...+..+.+..+..+...
T Consensus 179 --------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~ 244 (291)
T cd05094 179 --------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVL 244 (291)
T ss_pred --------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCC
Confidence 001122357889999999999989999999999999999998 99999888877776666554332
Q ss_pred CCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCC
Q 011302 388 FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 425 (489)
Q Consensus 388 ~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~ 425 (489)
... ... +..+.+||.+||+.||++||++.+
T Consensus 245 ~~~--~~~------~~~~~~li~~~l~~~P~~Rpt~~~ 274 (291)
T cd05094 245 ERP--RVC------PKEVYDIMLGCWQREPQQRLNIKE 274 (291)
T ss_pred CCC--ccC------CHHHHHHHHHHcccChhhCcCHHH
Confidence 111 111 125899999999999999999873
No 240
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=9.2e-42 Score=333.77 Aligned_cols=255 Identities=22% Similarity=0.279 Sum_probs=206.2
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|.+.+.||+|+||+||+|.+........+..||+|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD---NARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH---HHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 368999999999999999999875533333567799999875422 23455777999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCC-----------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEE
Q 011302 163 YSCLVMEYCPGGDLYAARQRQP-----------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIM 231 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vk 231 (489)
..|+||||+++++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence 9999999999999999887542 13489999999999999999999999999999999999999999999
Q ss_pred EcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccc
Q 011302 232 LSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQEL 311 (489)
Q Consensus 232 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (489)
|+|||+++.+.....
T Consensus 161 l~dfg~~~~~~~~~~----------------------------------------------------------------- 175 (288)
T cd05093 161 IGDFGMSRDVYSTDY----------------------------------------------------------------- 175 (288)
T ss_pred eccCCccccccCCce-----------------------------------------------------------------
Confidence 999999743211000
Q ss_pred cCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCC
Q 011302 312 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPR 390 (489)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~ 390 (489)
........+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+....+..+......
T Consensus 176 -----------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~ 244 (288)
T cd05093 176 -----------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP 244 (288)
T ss_pred -----------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCC
Confidence 000112246788999999999889999999999999999998 99999988877777777665432111
Q ss_pred CCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 391 IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 391 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
... +..+.+|+.+||+.||.+||++.
T Consensus 245 --~~~------~~~l~~li~~~l~~~p~~Rpt~~ 270 (288)
T cd05093 245 --RTC------PKEVYDLMLGCWQREPHMRLNIK 270 (288)
T ss_pred --CCC------CHHHHHHHHHHccCChhhCCCHH
Confidence 111 12489999999999999999987
No 241
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.5e-42 Score=336.80 Aligned_cols=268 Identities=26% Similarity=0.358 Sum_probs=207.6
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|+++. +++.||+|.+...... ......+..|+.+++.++||||+++++++.++..
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 75 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRV-----TNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKR 75 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecC-----CCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCe
Confidence 689999999999999999999876 5678999998654321 1233456679999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc-CCcEEEcccCCCcccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE-DGHIMLSDFDLSFKCD 242 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~-~~~vkl~DFG~a~~~~ 242 (489)
.|+||||++ ++|.+.+.......+++..+..++.||+.||+|||++||+||||||+||+++. ++.+||+|||++....
T Consensus 76 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 76 LYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred EEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 999999994 68888876655455788888999999999999999999999999999999985 5679999999974321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 155 ~~------------------------------------------------------------------------------ 156 (294)
T PLN00009 155 IP------------------------------------------------------------------------------ 156 (294)
T ss_pred CC------------------------------------------------------------------------------
Confidence 10
Q ss_pred ccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc---CCCC-----------
Q 011302 323 NARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---KPLT----------- 387 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~~----------- 387 (489)
........|++.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+.++.. .+..
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 0001123578899999998764 478999999999999999999999988776665554432 1100
Q ss_pred ----CCCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 388 ----FPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 388 ----~p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.+......... ......+.++|.+||+.+|++||++. ++++||||++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~----~~l~~~~~~~~~ 291 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITAR----AALEHEYFKDLG 291 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHH----HHhcCchHhHHh
Confidence 00000000000 01123588999999999999999987 999999998865
No 242
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.6e-42 Score=336.85 Aligned_cols=257 Identities=25% Similarity=0.390 Sum_probs=208.7
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|.+.+.||+|+||.||+|.... ++..||+|.+...... ....+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~ 89 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVA-----TGQEVAIKQMNLQQQP---KKELIINEILVMRENKHPNIVNYLDSYLVGD 89 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcC-----CCCEEEEEEeccccch---HHHHHHHHHHHHhhcCCCCeeehhheeeeCC
Confidence 3689999999999999999998765 4678999998644322 2345677999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+|+||+++++|.+++.. ..+++.++..++.|++.||.|||++|++||||||+||+++.++.+||+|||++....
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~ 166 (293)
T cd06647 90 ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (293)
T ss_pred cEEEEEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence 99999999999999998865 358899999999999999999999999999999999999999999999999873221
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 167 ~~------------------------------------------------------------------------------ 168 (293)
T cd06647 167 PE------------------------------------------------------------------------------ 168 (293)
T ss_pred cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC-CCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK-PLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~~~~ 401 (489)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||...+.......+... ...++... ..
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 241 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPE-------KL 241 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCcc-------cc
Confidence 00112236889999999998888999999999999999999999999877655443333221 11111100 11
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
...+++||++||..+|++||++. +++.|+||+..
T Consensus 242 ~~~l~~li~~~l~~~p~~Rp~~~----~il~h~~~~~~ 275 (293)
T cd06647 242 SAIFRDFLNRCLEMDVEKRGSAK----ELLQHPFLKIA 275 (293)
T ss_pred CHHHHHHHHHHccCChhhCcCHH----HHhcCHHHhcC
Confidence 23588999999999999999987 99999999764
No 243
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2e-41 Score=326.27 Aligned_cols=259 Identities=29% Similarity=0.477 Sum_probs=209.0
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|.+.+.||+|+||.||+|.+.. .++.|++|.+...... ......+..|+.+++.++|+||+++++.+.+.+.+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~ 74 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLD-----TGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKV 74 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECC-----CCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEE
Confidence 58899999999999999999876 4678999999866443 34567788899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
++|+||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 75 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 75 YIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred EEEEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 9999999999999998764 45889999999999999999999999999999999999999999999999997433210
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
... ...
T Consensus 153 ~~~--------------------------------------------------------------------------~~~ 158 (264)
T cd06626 153 TTT--------------------------------------------------------------------------MGE 158 (264)
T ss_pred CCc--------------------------------------------------------------------------ccc
Confidence 000 000
Q ss_pred CCccccCCCCccCcchhcCCC---CCCcccHHHHHHHHHHHhhCCCCCCCCCcH-HHHHHHhcC-CCCCCCCCCCCchhH
Q 011302 325 RSKSFVGTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNE-KTLINILKK-PLTFPRIGVSSSKEF 399 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~---~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~-~~~~p~~~~~~~~~~ 399 (489)
......|++.|+|||++.+.. ++.++|||||||++|||++|..||...+.. .....+... ...+|....
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------ 232 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQ------ 232 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccc------
Confidence 012246889999999998776 789999999999999999999999766433 333333322 122222211
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
....+.+||.+||+.+|.+||++. +++.|||+
T Consensus 233 -~~~~~~~li~~~l~~~p~~R~~~~----~i~~~~~~ 264 (264)
T cd06626 233 -LSPEGKDFLDRCLESDPKKRPTAS----ELLQHPFV 264 (264)
T ss_pred -cCHHHHHHHHHHccCCcccCCCHH----HHhcCCCC
Confidence 123578999999999999999987 99999996
No 244
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.1e-41 Score=328.22 Aligned_cols=250 Identities=24% Similarity=0.293 Sum_probs=204.3
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
++..++|++.+.||+|+||.||+|.+.. .+.||+|.++..... ...+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~------~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~ 71 (261)
T cd05068 2 EIDRTSIQLLRKLGAGQFGEVWEGLWNN------TTPVAVKTLKPGTMD----PKDFLAEAQIMKKLRHPKLIQLYAVCT 71 (261)
T ss_pred ccchhheeeEEEecccCCccEEEEEecC------CeEEEEEeeCCCccc----HHHHHHHHHHHHHCCCCCccceeEEEe
Confidence 4566889999999999999999998754 357999998754322 234667999999999999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
..+..|+||||+++++|.+++....+..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 151 (261)
T cd05068 72 LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLAR 151 (261)
T ss_pred cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEE
Confidence 99999999999999999999887655679999999999999999999999999999999999999999999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.+....
T Consensus 152 ~~~~~~-------------------------------------------------------------------------- 157 (261)
T cd05068 152 VIKEDI-------------------------------------------------------------------------- 157 (261)
T ss_pred EccCCc--------------------------------------------------------------------------
Confidence 332000
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
........++..|+|||++.+..++.++|||||||++|||++ |+.||.+.+....+..+.... ..+... .
T Consensus 158 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~-~---- 228 (261)
T cd05068 158 ---YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY-RMPCPP-G---- 228 (261)
T ss_pred ---ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCC-c----
Confidence 000011123457999999999889999999999999999999 999999888777776665432 222111 1
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
....+.+||.+||+.+|++||++.
T Consensus 229 --~~~~~~~li~~~l~~~P~~Rp~~~ 252 (261)
T cd05068 229 --CPKELYDIMLDCWKEDPDDRPTFE 252 (261)
T ss_pred --CCHHHHHHHHHHhhcCcccCCCHH
Confidence 112589999999999999999986
No 245
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.8e-42 Score=343.69 Aligned_cols=266 Identities=20% Similarity=0.265 Sum_probs=203.4
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 157 (489)
|.+..++|++.+.||+|+||+||+|.+.+......++.||||+++..... .....+.+|+.+|..+ +||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGA 79 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh--HHHHHHHHHHHHHHhccCCccHhhhcce
Confidence 45667899999999999999999999765433346789999999753221 2345677799999999 68999999998
Q ss_pred eec-CceEEEEEeecCCCchHHHHHhCC----------------------------------------------------
Q 011302 158 FEA-SHYSCLVMEYCPGGDLYAARQRQP---------------------------------------------------- 184 (489)
Q Consensus 158 ~~~-~~~~~lV~E~~~gg~L~~~l~~~~---------------------------------------------------- 184 (489)
+.. +..+|+|||||++|+|.+++....
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 754 457899999999999999886531
Q ss_pred -------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCc
Q 011302 185 -------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPK 251 (489)
Q Consensus 185 -------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 251 (489)
...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~----- 234 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----- 234 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-----
Confidence 12367778889999999999999999999999999999999999999999999743211000
Q ss_pred chhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccC
Q 011302 252 LSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVG 331 (489)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 331 (489)
........+
T Consensus 235 -----------------------------------------------------------------------~~~~~~~~~ 243 (343)
T cd05103 235 -----------------------------------------------------------------------YVRKGDARL 243 (343)
T ss_pred -----------------------------------------------------------------------hhhcCCCCC
Confidence 000112245
Q ss_pred CCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHH
Q 011302 332 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLIS 410 (489)
Q Consensus 332 t~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~ 410 (489)
++.|+|||++.+..++.++|||||||++|||++ |..||.+......+..........+.... . ...+.+++.
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~ 316 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY-T------TPEMYQTML 316 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCC-C------CHHHHHHHH
Confidence 678999999999889999999999999999996 99999876544333333322222111111 1 124889999
Q ss_pred HHhhcCcccccCCCCChHHHHcC
Q 011302 411 KLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 411 ~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
+||+.||++||++. +|++|
T Consensus 317 ~cl~~~p~~Rps~~----eil~~ 335 (343)
T cd05103 317 DCWHGEPSQRPTFS----ELVEH 335 (343)
T ss_pred HHccCChhhCcCHH----HHHHH
Confidence 99999999999997 77765
No 246
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=7.1e-42 Score=334.91 Aligned_cols=263 Identities=28% Similarity=0.363 Sum_probs=200.3
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++.+.||+|+||.||+|.++. ++..||+|++...... .....+.+|+.+++.++|+||+++++++.+++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 76 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRI-----NGQLVALKVISMKTEE--GVPFTAIREASLLKGLKHANIVLLHDIIHTKE 76 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcC-----CCcEEEEEEecccCcC--CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC
Confidence 3689999999999999999999886 5678999998654211 11224556999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+. ++|.+.+.... ..+.+..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 77 ~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 77 TLTFVFEYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred eEEEEEeccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 9999999994 77777665542 457888999999999999999999999999999999999999999999999973211
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 155 ~~------------------------------------------------------------------------------ 156 (291)
T cd07870 155 IP------------------------------------------------------------------------------ 156 (291)
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcH-HHHHHHhcC---C------------
Q 011302 323 NARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNE-KTLINILKK---P------------ 385 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~---~------------ 385 (489)
........+++.|+|||++.+. .++.++|||||||++|||++|..||.+.+.. +.+.++... +
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 157 SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 0001123578899999998764 4788999999999999999999999876542 222222110 0
Q ss_pred ----CCCCCCCCCCc----hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 386 ----LTFPRIGVSSS----KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 386 ----~~~p~~~~~~~----~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..++....... ........+.+||.+||+.||.+||++. +++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~----~~l~h~~~ 291 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQ----DALLHPYF 291 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHH----HHhcCCCC
Confidence 00000000000 0011123588999999999999999997 99999998
No 247
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.4e-41 Score=328.68 Aligned_cols=256 Identities=27% Similarity=0.393 Sum_probs=200.4
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
...+.+.....||+|+||.||+|.++. ++..||+|.+...... ....+.+|+.+++.++|+||+++++++..
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~v~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 76 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLS-----TQVRIAIKEIPERDSR---YVQPLHEEIALHSYLKHRNIVQYLGSDSE 76 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecC-----CCcEEEEEEecCCCHH---HHHHHHHHHHHHHhcCCCCeeeeeeeecc
Confidence 344566666789999999999999876 5678999988654322 33466779999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCC--ChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc-CCcEEEcccCC
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRF--GISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE-DGHIMLSDFDL 237 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l--~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~-~~~vkl~DFG~ 237 (489)
++..|+||||+++++|.+++.... ..+ ++..+..++.||+.||+|||++||+||||||+||+++. ++.++|+|||+
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~ 155 (268)
T cd06624 77 NGFFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGT 155 (268)
T ss_pred CCEEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchh
Confidence 999999999999999999887642 335 78888999999999999999999999999999999986 67999999998
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
+......
T Consensus 156 ~~~~~~~------------------------------------------------------------------------- 162 (268)
T cd06624 156 SKRLAGI------------------------------------------------------------------------- 162 (268)
T ss_pred heecccC-------------------------------------------------------------------------
Confidence 7322100
Q ss_pred cccccccCCccccCCCCccCcchhcCCC--CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHH-HHHHh--cCCCCCCCCC
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQG--HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT-LINIL--KKPLTFPRIG 392 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~~i~--~~~~~~p~~~ 392 (489)
+.......|++.|+|||.+.+.. ++.++|||||||++|+|++|..||........ ...+. .....+|.
T Consensus 163 -----~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (268)
T cd06624 163 -----NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPE-- 235 (268)
T ss_pred -----CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCc--
Confidence 00011235789999999987643 78899999999999999999999976543221 11111 11111221
Q ss_pred CCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 393 VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 393 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
. ...++.+||.+||..+|++||++. +++.||||
T Consensus 236 -~------~~~~~~~li~~~l~~~p~~Rpt~~----~ll~~~~~ 268 (268)
T cd06624 236 -S------LSAEAKNFILRCFEPDPDKRASAH----DLLQDPFL 268 (268)
T ss_pred -c------cCHHHHHHHHHHcCCCchhCCCHH----HHHhCCCC
Confidence 1 112589999999999999999997 99999997
No 248
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.4e-41 Score=326.12 Aligned_cols=255 Identities=29% Similarity=0.446 Sum_probs=207.8
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHH--HHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
+|+..+.||+|+||+||+|.... ++..|++|.+..... ........+.+|+.+++.++|+||+++++++.++.
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLD-----DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcC-----CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC
Confidence 47778899999999999999875 467899999865331 12234556778999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.+|+||||++|++|.+++.+. ..+++..+..++.||+.||+|||+.||+|+||||+||+++.++.+||+|||++....
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999999999998765 468899999999999999999999999999999999999999999999999873321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 154 ~~------------------------------------------------------------------------------ 155 (258)
T cd06632 154 EF------------------------------------------------------------------------------ 155 (258)
T ss_pred cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred ccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
.......|++.|+|||.+.... ++.++|+|||||++|+|++|+.||...........+.... ..+..... .
T Consensus 156 -~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~------~ 227 (258)
T cd06632 156 -SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-ELPPIPDH------L 227 (258)
T ss_pred -ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-cCCCcCCC------c
Confidence 0012345889999999998776 8999999999999999999999998776555554444311 11211111 1
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
...+.+||.+||..+|.+||++. +++.|||+
T Consensus 228 ~~~~~~li~~~l~~~p~~Rp~~~----~~l~~~~~ 258 (258)
T cd06632 228 SDEAKDFILKCLQRDPSLRPTAA----ELLEHPFV 258 (258)
T ss_pred CHHHHHHHHHHhhcCcccCcCHH----HHhcCCCC
Confidence 13589999999999999999987 99999996
No 249
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=7.9e-42 Score=330.01 Aligned_cols=255 Identities=24% Similarity=0.337 Sum_probs=202.9
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|++.. +++.||||.+.............+..|+.+++.++||||+++++++.+.+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLL-----DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeC-----CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCe
Confidence 689999999999999999999876 568899998865333223444567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
.|+||||+++|+|.+++... ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++..+
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~ 156 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceec
Confidence 99999999999999887542 2245788999999999999999999999999999999999999999999999987432
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
....
T Consensus 157 ~~~~---------------------------------------------------------------------------- 160 (267)
T cd08228 157 SSKT---------------------------------------------------------------------------- 160 (267)
T ss_pred cchh----------------------------------------------------------------------------
Confidence 1100
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCc--HHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN--EKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.......|++.|+|||.+.+..++.++|||||||++|||++|..||..... ......+.... ++.....
T Consensus 161 --~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~----- 231 (267)
T cd08228 161 --TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLPTE----- 231 (267)
T ss_pred --HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCChh-----
Confidence 001123588999999999988899999999999999999999999976532 23333333221 2221111
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
.....+.+||.+||..+|++||++. ++++
T Consensus 232 ~~~~~~~~li~~cl~~~p~~Rp~~~----~vl~ 260 (267)
T cd08228 232 HYSEKLRELVSMCIYPDPDQRPDIG----YVHQ 260 (267)
T ss_pred hcCHHHHHHHHHHCCCCcccCcCHH----HHHH
Confidence 1123589999999999999999997 6665
No 250
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.3e-41 Score=327.46 Aligned_cols=259 Identities=27% Similarity=0.443 Sum_probs=213.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|++.. +++.|++|++...... .....+..|+.++..++|+||+++++++...+.
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~-----~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 73 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKP-----TGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGE 73 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcC-----CCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCe
Confidence 478999999999999999999987 5788999998765432 334567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.|+||||+++++|.+++... ..+++..+..++.|++.||+|||+ +|++||||+|+||+++.++.++|+|||++....
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~ 151 (264)
T cd06623 74 ISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLE 151 (264)
T ss_pred EEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 99999999999999998765 579999999999999999999999 999999999999999999999999999873321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
...
T Consensus 152 ~~~----------------------------------------------------------------------------- 154 (264)
T cd06623 152 NTL----------------------------------------------------------------------------- 154 (264)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC---cHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN---NEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~---~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.......|+..|+|||.+.+..++.++|||||||++|+|++|..||.... ..+....+...... + .....
T Consensus 155 -~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~---- 227 (264)
T cd06623 155 -DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPP-S-LPAEE---- 227 (264)
T ss_pred -CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCC-C-CCccc----
Confidence 00112357889999999999889999999999999999999999998774 34444444432211 1 11110
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.+..+.++|.+||..+|++||++. ++++||||+.++
T Consensus 228 -~~~~l~~li~~~l~~~p~~R~~~~----~ll~~~~~~~~~ 263 (264)
T cd06623 228 -FSPEFRDFISACLQKDPKKRPSAA----ELLQHPFIKKAD 263 (264)
T ss_pred -CCHHHHHHHHHHccCChhhCCCHH----HHHhCHHHHhcc
Confidence 112589999999999999999997 999999998764
No 251
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=6.8e-42 Score=339.28 Aligned_cols=255 Identities=21% Similarity=0.260 Sum_probs=199.6
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+...+|++.+.||+|+||.||+|++..... .....||+|+++.... .....++..|+.+++.++||||+++++++..
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~ 80 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGE-KVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLT 80 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCC-ccceeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC
Confidence 345789999999999999999999865322 1244589999864321 1234567779999999999999999998876
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
. ..++|+||+++|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~-~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 81 S-TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred C-CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccc
Confidence 5 5789999999999999987653 4688889999999999999999999999999999999999999999999999854
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+......
T Consensus 159 ~~~~~~~------------------------------------------------------------------------- 165 (316)
T cd05108 159 LGADEKE------------------------------------------------------------------------- 165 (316)
T ss_pred ccCCCcc-------------------------------------------------------------------------
Confidence 3210000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+....+. ..+......+|..... .
T Consensus 166 ---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~-~--- 237 (316)
T cd05108 166 ---YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPIC-T--- 237 (316)
T ss_pred ---eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCCCCCCCCCC-C---
Confidence 00011234678999999999999999999999999999997 9999988765544 3444433333322211 1
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..+.++|.+||..||++||++.
T Consensus 238 ---~~~~~li~~cl~~~p~~Rps~~ 259 (316)
T cd05108 238 ---IDVYMIMVKCWMIDADSRPKFR 259 (316)
T ss_pred ---HHHHHHHHHHccCChhhCcCHH
Confidence 2478999999999999999997
No 252
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.3e-41 Score=328.47 Aligned_cols=258 Identities=21% Similarity=0.257 Sum_probs=206.6
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++.+.||+|+||.||+|++.... .....||||.+..... ......+..|+.+++.++||||+++++++..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~--~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 78 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPG--KKEIDVAIKTLKAGSS--DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR 78 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCC--CCcceEEEEEcCCCCC--hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC
Confidence 468999999999999999999987531 1356899999875432 223345677999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+++++|.+++.... ..+++..+..++.|++.||+|||+++|+||||||+|||++.++.++|+|||+++.+.
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 79 PVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 9999999999999999987653 478999999999999999999999999999999999999999999999999985432
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
.....
T Consensus 158 ~~~~~--------------------------------------------------------------------------- 162 (266)
T cd05033 158 DSEAT--------------------------------------------------------------------------- 162 (266)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 00000
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
.......+++.|+|||.+.+..++.++|||||||++|||++ |..||......+....+.... ..+.... .
T Consensus 163 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~-~------ 233 (266)
T cd05033 163 -YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY-RLPPPMD-C------ 233 (266)
T ss_pred -eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-CCCCCCC-C------
Confidence 00011235678999999999889999999999999999997 999998877777666665432 2222111 1
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
+..+.+|+.+||+.+|++||++. +++++
T Consensus 234 ~~~l~~li~~cl~~~p~~Rp~~~----ei~~~ 261 (266)
T cd05033 234 PSALYQLMLDCWQKDRNERPTFS----QIVST 261 (266)
T ss_pred CHHHHHHHHHHcCCCcccCcCHH----HHHHH
Confidence 12589999999999999999987 55543
No 253
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.9e-42 Score=337.07 Aligned_cols=264 Identities=27% Similarity=0.347 Sum_probs=206.1
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC-
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~- 161 (489)
.++|++.+.||+|+||.||+|.++. +++.+|+|.++..... ......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 77 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKK-----TGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSN 77 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECC-----CCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC
Confidence 3679999999999999999999886 4678999999755333 22333456799999999999999999998877
Q ss_pred -ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 162 -HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 162 -~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
...|+||||+. ++|.+++.... ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..
T Consensus 78 ~~~~~lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~ 155 (293)
T cd07843 78 LDKIYMVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLARE 155 (293)
T ss_pred CCcEEEEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceee
Confidence 89999999996 59988887653 4689999999999999999999999999999999999999999999999998743
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+....
T Consensus 156 ~~~~~--------------------------------------------------------------------------- 160 (293)
T cd07843 156 YGSPL--------------------------------------------------------------------------- 160 (293)
T ss_pred ccCCc---------------------------------------------------------------------------
Confidence 22100
Q ss_pred ccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC-----------CC
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL-----------TF 388 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----------~~ 388 (489)
.......+++.|+|||.+.+.. ++.++|||||||++|||++|.+||.+.+..+.+.++...-. ..
T Consensus 161 ---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 161 ---KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred ---cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 0011235788999999987654 68899999999999999999999998876665554432100 00
Q ss_pred CCCCC-----CC----chhHH---HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 389 PRIGV-----SS----SKEFE---EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 389 p~~~~-----~~----~~~~~---~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+.... .. ...+. ....+.+||.+||+.||++||++. |++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~----ell~~~~f 293 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAE----DALKHPYF 293 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHH----HHhcCCCC
Confidence 00000 00 00000 133588999999999999999987 99999998
No 254
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.1e-41 Score=332.46 Aligned_cols=264 Identities=27% Similarity=0.403 Sum_probs=207.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|.++. +++.||+|+++..... ......+.+|+.+++.++|+||+++++++..++.
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~-----~~~~v~vK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 74 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKA-----TGEIVAIKKFKESEDD-EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGR 74 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCC-----CCcEEEEehhhhhccc-ccchhHHHHHHHHHHhcCCCCeeehhheEEECCE
Confidence 479999999999999999999886 4678999998754322 2334567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||++++.|..+.... ..+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 75 LYLVFEYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRA 152 (288)
T ss_pred EEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence 99999999887776655443 4589999999999999999999999999999999999999999999999999743221
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.. .
T Consensus 153 ~~-----------------------------------------------------------------------------~ 155 (288)
T cd07833 153 RP-----------------------------------------------------------------------------A 155 (288)
T ss_pred Cc-----------------------------------------------------------------------------c
Confidence 00 0
Q ss_pred cCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC----------------
Q 011302 324 ARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL---------------- 386 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------- 386 (489)
.......|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+....+.+..+.....
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 011234688999999999888 789999999999999999999999987766544433321000
Q ss_pred ---CCCCCCCCCch--hH--HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 387 ---TFPRIGVSSSK--EF--EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 387 ---~~p~~~~~~~~--~~--~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.++........ .+ ....++.+||.+||..+|++||++. ++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~----~il~~~~f 288 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCD----ELLQHPYF 288 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHH----HHhcCCCC
Confidence 01110000000 00 0134689999999999999999987 99999998
No 255
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8.9e-42 Score=347.81 Aligned_cols=261 Identities=21% Similarity=0.254 Sum_probs=205.4
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~ 157 (489)
+++..++|.+.+.||+|+||.||+|++++.......+.||+|+++..... .....+..|+.+|..+. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS--SEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh--hHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 55666789999999999999999999875333335678999999754222 22345778999999997 9999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCC----------------------------------------------------
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPG---------------------------------------------------- 185 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~---------------------------------------------------- 185 (489)
+...+..|+|||||++|+|.+++.+...
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999875321
Q ss_pred --------------------------------------------CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCC
Q 011302 186 --------------------------------------------KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPEN 221 (489)
Q Consensus 186 --------------------------------------------~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~N 221 (489)
..+++..+..|+.||+.||+|||+++|+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 235667788899999999999999999999999999
Q ss_pred eEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 011302 222 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 301 (489)
Q Consensus 222 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
||++.++.+||+|||+++.+.....
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~------------------------------------------------------- 294 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSN------------------------------------------------------- 294 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccc-------------------------------------------------------
Confidence 9999999999999999843210000
Q ss_pred cCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHH
Q 011302 302 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLIN 380 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 380 (489)
........|++.|+|||.+.+..++.++|||||||++|||++ |..||......+...+
T Consensus 295 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~ 353 (401)
T cd05107 295 ---------------------YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN 353 (401)
T ss_pred ---------------------cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHH
Confidence 000122357889999999998889999999999999999998 8999987766555444
Q ss_pred HhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 381 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 381 i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
........+... .. ..++.+||.+||..+|++||++.
T Consensus 354 ~~~~~~~~~~p~-~~------~~~l~~li~~cl~~~P~~RPs~~ 390 (401)
T cd05107 354 AIKRGYRMAKPA-HA------SDEIYEIMQKCWEEKFEIRPDFS 390 (401)
T ss_pred HHHcCCCCCCCC-CC------CHHHHHHHHHHcCCChhHCcCHH
Confidence 443332222111 11 13589999999999999999997
No 256
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.5e-41 Score=326.94 Aligned_cols=256 Identities=26% Similarity=0.399 Sum_probs=209.2
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee--cCc
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE--ASH 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~--~~~ 162 (489)
+|++++.||.|+||.||+|.+.. ++..||+|++...... .....++..|+.+++.++||||+++++++. .+.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKS-----DGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQ 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecC-----CCCEEEEEEEecccCC-HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCC
Confidence 58899999999999999999886 5678999998754332 233456778999999999999999999775 456
Q ss_pred eEEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHH-----hCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLH-----MMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH-----~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
.+|+||||+++++|.+++... ....+++..+..++.||+.||+||| +.+|+|+||||+||+++.++.+||+||
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~ 154 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDF 154 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecc
Confidence 789999999999999888653 2357899999999999999999999 899999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|++......
T Consensus 155 g~~~~~~~~----------------------------------------------------------------------- 163 (265)
T cd08217 155 GLAKILGHD----------------------------------------------------------------------- 163 (265)
T ss_pred cccccccCC-----------------------------------------------------------------------
Confidence 997432110
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSS 395 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~ 395 (489)
........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......+..+... .....
T Consensus 164 -------~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~- 233 (265)
T cd08217 164 -------SSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFR--RIPYR- 233 (265)
T ss_pred -------cccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCC--CCccc-
Confidence 00012336899999999999988999999999999999999999999988766666666554321 11111
Q ss_pred chhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 396 SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 396 ~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
....+.+|+.+||..+|++||++. +|++|||+
T Consensus 234 -----~~~~~~~l~~~~l~~~p~~Rp~~~----~il~~~~~ 265 (265)
T cd08217 234 -----YSSELNEVIKSMLNVDPDKRPSTE----ELLQLPLI 265 (265)
T ss_pred -----cCHHHHHHHHHHccCCcccCCCHH----HHhhCCCC
Confidence 113589999999999999999998 99999996
No 257
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.6e-41 Score=327.81 Aligned_cols=251 Identities=26% Similarity=0.366 Sum_probs=202.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|++.. .+..||||.+............++.+|+.+++.++||||+++++++..++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~-----~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLL-----DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecC-----CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCe
Confidence 579999999999999999999876 467899998876544434455677889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
.|+||||++|++|.+++... ....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence 99999999999999988642 2356899999999999999999999999999999999999999999999999987332
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
...
T Consensus 157 ~~~----------------------------------------------------------------------------- 159 (267)
T cd08229 157 SSK----------------------------------------------------------------------------- 159 (267)
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 100
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH--HHHHHHhcCCCCCCCCCCCCchhH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE--KTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.... .....+.... ++.....
T Consensus 160 -~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~----- 231 (267)
T cd08229 160 -TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLPSD----- 231 (267)
T ss_pred -CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC--CCCCCcc-----
Confidence 00012346889999999999988999999999999999999999999765432 2333333221 1211111
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.....+.+||.+||..||++||++.
T Consensus 232 ~~~~~~~~li~~~l~~~p~~Rpt~~ 256 (267)
T cd08229 232 HYSEELRQLVNMCINPDPEKRPDIT 256 (267)
T ss_pred cccHHHHHHHHHhcCCCcccCCCHH
Confidence 1123589999999999999999987
No 258
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.4e-41 Score=335.51 Aligned_cols=257 Identities=27% Similarity=0.366 Sum_probs=207.8
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
....|.+.+.||+|+||+||+|.... .++.||+|.+.............+.+|+.+++.++||||+++++++.++
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~ 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVR-----TNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE 87 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcC-----CCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC
Confidence 44679999999999999999999876 4678999998654333334445677899999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
+..|+||||+. |+|.+++.... ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.+||+|||++...
T Consensus 88 ~~~~lv~e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~ 165 (307)
T cd06607 88 HTAWLVMEYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLV 165 (307)
T ss_pred CeEEEEHHhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceec
Confidence 99999999995 67777665432 46899999999999999999999999999999999999999999999999987321
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
..
T Consensus 166 ~~------------------------------------------------------------------------------ 167 (307)
T cd06607 166 SP------------------------------------------------------------------------------ 167 (307)
T ss_pred CC------------------------------------------------------------------------------
Confidence 10
Q ss_pred cccCCccccCCCCccCcchhc---CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 322 INARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
.....|++.|+|||++. ...++.++|||||||++|||++|..||.+.+.......+..... +.... .
T Consensus 168 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~---~- 237 (307)
T cd06607 168 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLSS---N- 237 (307)
T ss_pred ----CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC--CCCCc---h-
Confidence 11235788999999985 34578899999999999999999999988776655554443211 11110 0
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
.....+.+||.+||..||++||++. +++.||||..
T Consensus 238 -~~~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~~~ 272 (307)
T cd06607 238 -DWSDYFRNFVDSCLQKIPQDRPSSE----ELLKHRFVLR 272 (307)
T ss_pred -hhCHHHHHHHHHHhcCChhhCcCHH----HHhcChhhcc
Confidence 1123589999999999999999987 9999999975
No 259
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8.3e-42 Score=336.67 Aligned_cols=257 Identities=21% Similarity=0.303 Sum_probs=201.6
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceee
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE 159 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~ 159 (489)
+..++|++.+.||+|+||.||+|.++... ....+|+|.+.... .......+.+|+.++.++ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~---~~~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~ 78 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDG---LRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACE 78 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCC---ceeeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC
Confidence 45679999999999999999999987521 22356777765321 123345667799999999 8999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCC--------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEec
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQP--------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVR 225 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~ 225 (489)
.++..|+||||+++|+|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~ 158 (303)
T cd05088 79 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG 158 (303)
T ss_pred CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec
Confidence 9999999999999999999987542 23578999999999999999999999999999999999999
Q ss_pred cCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCC
Q 011302 226 EDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGD 305 (489)
Q Consensus 226 ~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (489)
.++.+||+|||++......
T Consensus 159 ~~~~~kl~dfg~~~~~~~~------------------------------------------------------------- 177 (303)
T cd05088 159 ENYVAKIADFGLSRGQEVY------------------------------------------------------------- 177 (303)
T ss_pred CCCcEEeCccccCcccchh-------------------------------------------------------------
Confidence 9999999999987311000
Q ss_pred CCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcC
Q 011302 306 HHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKK 384 (489)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~ 384 (489)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+...
T Consensus 178 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~ 239 (303)
T cd05088 178 ------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 239 (303)
T ss_pred ------------------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC
Confidence 00011134667999999988889999999999999999998 99999888777666655432
Q ss_pred CCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 385 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 385 ~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
. ..+.. .. ....+.+||.+||+.+|++||++. +++++
T Consensus 240 ~-~~~~~-~~------~~~~~~~li~~~l~~~p~~Rp~~~----~il~~ 276 (303)
T cd05088 240 Y-RLEKP-LN------CDDEVYDLMRQCWREKPYERPSFA----QILVS 276 (303)
T ss_pred C-cCCCC-CC------CCHHHHHHHHHHcCCChhhCcCHH----HHHHH
Confidence 1 11111 11 112588999999999999999997 55554
No 260
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.8e-41 Score=321.73 Aligned_cols=250 Identities=48% Similarity=0.839 Sum_probs=212.3
Q ss_pred eccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeec
Q 011302 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (489)
Q Consensus 92 lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 171 (489)
||.|+||.||+|.+.. .++.||+|++.+...........+..|+.+++.++||||+++++.+..+...|+||||+
T Consensus 1 lg~G~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKD-----TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECC-----CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecC
Confidence 6999999999999876 46789999998876554456667888999999999999999999999999999999999
Q ss_pred CCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCc
Q 011302 172 PGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPK 251 (489)
Q Consensus 172 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 251 (489)
++++|.+++... ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++.......
T Consensus 76 ~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~------ 147 (250)
T cd05123 76 PGGELFSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG------ 147 (250)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC------
Confidence 999999998775 468999999999999999999999999999999999999999999999999873321100
Q ss_pred chhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccC
Q 011302 252 LSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVG 331 (489)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 331 (489)
.......|
T Consensus 148 ------------------------------------------------------------------------~~~~~~~~ 155 (250)
T cd05123 148 ------------------------------------------------------------------------SRTNTFCG 155 (250)
T ss_pred ------------------------------------------------------------------------CcccCCcC
Confidence 01123468
Q ss_pred CCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHH
Q 011302 332 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISK 411 (489)
Q Consensus 332 t~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~ 411 (489)
+..|+|||.+.+...+.++|+|||||++|+|++|..||...+.......+......+|... ...+.+||.+
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~i~~ 226 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFL---------SPEARDLISG 226 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCC---------CHHHHHHHHH
Confidence 8899999999988889999999999999999999999988877666677666544444332 1248999999
Q ss_pred HhhcCcccccCCCCChHHHHcCCCc
Q 011302 412 LLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 412 ~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
||..||++||++.. +++++.||||
T Consensus 227 ~l~~~p~~R~~~~~-~~~l~~~~~f 250 (250)
T cd05123 227 LLQKDPTKRLGSGG-AEEIKAHPFF 250 (250)
T ss_pred HhcCCHhhCCCccc-HHHHHhCCCC
Confidence 99999999999943 4499999998
No 261
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-41 Score=327.02 Aligned_cols=251 Identities=22% Similarity=0.282 Sum_probs=204.0
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++++.||+|+||+||+|++.+ ...+|+|.+...... ...+..|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~------~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 72 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG------QYDVAIKMIKEGSMS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQR 72 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC------CCcEEEEEcCCCccc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 4679999999999999999998765 245899988754332 234667999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.+|+||||+.+|+|.+++.... ..+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++.+.
T Consensus 73 ~~~lv~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 73 PIYIVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVL 151 (256)
T ss_pred CcEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecC
Confidence 9999999999999999987653 368999999999999999999999999999999999999999999999999874321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
...
T Consensus 152 ~~~----------------------------------------------------------------------------- 154 (256)
T cd05113 152 DDE----------------------------------------------------------------------------- 154 (256)
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||...+..+....+..+....... ..
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~------ 226 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPH--LA------ 226 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCC--CC------
Confidence 000111235678999999998889999999999999999998 999998888777777776543322111 11
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
...+.+++.+||+.||++||++. +|+.+
T Consensus 227 ~~~~~~li~~cl~~~p~~Rp~~~----~ll~~ 254 (256)
T cd05113 227 SEKVYAIMYSCWHEKAEERPTFQ----QLLSS 254 (256)
T ss_pred CHHHHHHHHHHcCCCcccCCCHH----HHHHh
Confidence 12589999999999999999997 77653
No 262
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.3e-41 Score=336.64 Aligned_cols=264 Identities=20% Similarity=0.310 Sum_probs=197.4
Q ss_pred CceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeecCCCc
Q 011302 96 DIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGD 175 (489)
Q Consensus 96 ~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~ 175 (489)
++|.||+++.+. +++.||||++...... ......+..|+.+++.++||||+++++++.+.+..|++|||+++|+
T Consensus 12 ~~~~v~~~~~~~-----~~~~~avK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 12 DLMIVHLAKHKP-----TNTLVAVKKINLDSCS-KEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred CCceEEEEEecC-----CCCEEEEEEEeccccc-hhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 445555555554 4688999999765322 2345678889999999999999999999999999999999999999
Q ss_pred hHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhH
Q 011302 176 LYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFE 255 (489)
Q Consensus 176 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~ 255 (489)
|.+++.......+++..+..++.|++.||+|||+++|+||||||+|||++.+|.+||+|||.+..+.......
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~------- 158 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ------- 158 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccc-------
Confidence 9999887555678999999999999999999999999999999999999999999999999874321100000
Q ss_pred HHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCCCc
Q 011302 256 AIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEY 335 (489)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y 335 (489)
...........++..|
T Consensus 159 ----------------------------------------------------------------~~~~~~~~~~~~~~~y 174 (314)
T cd08216 159 ----------------------------------------------------------------RVVHDFPKSSVKNLPW 174 (314)
T ss_pred ----------------------------------------------------------------cccccccccccccccc
Confidence 0000011233578899
Q ss_pred cCcchhcCC--CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC-------CCCCC--------------
Q 011302 336 LAPEVISGQ--GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT-------FPRIG-------------- 392 (489)
Q Consensus 336 ~aPE~l~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-------~p~~~-------------- 392 (489)
+|||++.+. .++.++|||||||++|||++|..||..........+...+... .+...
T Consensus 175 ~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
T cd08216 175 LSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPN 254 (314)
T ss_pred cCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccc
Confidence 999999764 5789999999999999999999999876654433222221100 00000
Q ss_pred ----CCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 393 ----VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 393 ----~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
...........++.+||.+||.+||++||++. ++++||||+.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~----~ll~~p~~~~~~ 302 (314)
T cd08216 255 NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSAS----QLLNHSFFKQCK 302 (314)
T ss_pred hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHH----HHhcCchHhhhc
Confidence 00000011224688999999999999999987 999999998763
No 263
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2e-41 Score=329.70 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=198.3
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecC--c
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEAS--H 162 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~--~ 162 (489)
|++++.||+|+||.||+|.+.. +++.||+|.++....... . .....|+.++.++. |+||+++++++.++ +
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~-----~~~~~aik~~~~~~~~~~-~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 73 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRK-----TGKYYAIKCMKKHFKSLE-Q-VNNLREIQALRRLSPHPNILRLIEVLFDRKTG 73 (282)
T ss_pred CceEeeccccccceEEEEEEcC-----CCcEEEEEEehhccCCch-h-hhHHHHHHHHhhcCCCCCccceEEEEecCCCC
Confidence 6789999999999999999876 568899999875422111 1 12345888888885 99999999999987 8
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.+|+||||++ |+|.+.+.... ..+++.++..++.|++.||+|||++||+||||||+||+++. +.+||+|||+++...
T Consensus 74 ~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 74 RLALVFELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred cEEEEEecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 9999999996 58877776542 46899999999999999999999999999999999999999 999999999974321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 151 ~~------------------------------------------------------------------------------ 152 (282)
T cd07831 151 SK------------------------------------------------------------------------------ 152 (282)
T ss_pred cC------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC-----------------
Q 011302 323 NARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK----------------- 384 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~----------------- 384 (489)
.......+++.|+|||++.. ..++.++|||||||++|||++|.+||.+.+..+.+..+...
T Consensus 153 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 153 -PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred -CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 00112357889999998754 44688999999999999999999999988766554444321
Q ss_pred -CCCCCCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 385 -PLTFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 385 -~~~~p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
...+|......... ...+..+.+||.+||..||++||++. ++++||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~----~~l~~~~~ 282 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAK----QALRHPYF 282 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHH----HHhhCCCC
Confidence 01111110000000 01234689999999999999999997 99999998
No 264
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.7e-41 Score=329.85 Aligned_cols=261 Identities=20% Similarity=0.283 Sum_probs=204.6
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|.+.+.||+|+||.||+|.+...........||+|.+...... .....+..|+.+++.++|+||+++++++.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE--QDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 44789999999999999999999876322224678999988643211 2234567799999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCC-----CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC---cEEEc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPG-----KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG---HIMLS 233 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~---~vkl~ 233 (489)
...|+||||++|++|.+++..... ..+++..+..++.||+.||+|||+++++||||||+|||++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 999999999999999999876421 2588899999999999999999999999999999999998765 59999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||+++.+.....
T Consensus 162 dfg~~~~~~~~~~------------------------------------------------------------------- 174 (277)
T cd05036 162 DFGMARDIYRASY------------------------------------------------------------------- 174 (277)
T ss_pred cCccccccCCccc-------------------------------------------------------------------
Confidence 9999843311000
Q ss_pred CccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCC-CCCCCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKP-LTFPRI 391 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~ 391 (489)
........++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+.... ..+|.
T Consensus 175 ---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 244 (277)
T cd05036 175 ---------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPK- 244 (277)
T ss_pred ---------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCC-
Confidence 000111234567999999998889999999999999999996 999999887776665554432 11111
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
.. +..+.+||.+||+.+|++||++. ++++|
T Consensus 245 --~~------~~~~~~~i~~cl~~~p~~Rps~~----~vl~~ 274 (277)
T cd05036 245 --GC------PGPVYRIMTDCWQHTPEDRPNFA----TILER 274 (277)
T ss_pred --CC------CHHHHHHHHHHcCCCcccCcCHH----HHHHH
Confidence 11 12588999999999999999997 78776
No 265
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=7.2e-42 Score=338.57 Aligned_cols=269 Identities=26% Similarity=0.320 Sum_probs=201.3
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC--c
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--H 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~ 162 (489)
.|++.+.||+|+||.||+|.+... ..+..||+|.+.............+.+|+.+++.++||||+++++++.+. .
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~---~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNG---KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCC---CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCc
Confidence 488999999999999999998752 14678999999874322223344566799999999999999999999988 8
Q ss_pred eEEEEEeecCCCchHHHHHhCC---CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc----CCcEEEccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQP---GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE----DGHIMLSDF 235 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~----~~~vkl~DF 235 (489)
.+|+||||++ ++|.+++.... ...+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+||
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 78 SVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred eEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 8999999995 57766664321 236889999999999999999999999999999999999999 999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+++.+......
T Consensus 157 g~~~~~~~~~~~-------------------------------------------------------------------- 168 (316)
T cd07842 157 GLARLFNAPLKP-------------------------------------------------------------------- 168 (316)
T ss_pred ccccccCCCccc--------------------------------------------------------------------
Confidence 998443210000
Q ss_pred cccccccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHH---------HHHHHhcC-
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK---------TLINILKK- 384 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~---------~~~~i~~~- 384 (489)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+..... .+.++...
T Consensus 169 -------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (316)
T cd07842 169 -------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVL 241 (316)
T ss_pred -------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHh
Confidence 0011234688999999998774 47899999999999999999999998654321 11111110
Q ss_pred ----------------------CCCCCCCCCCCchhH-----HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 385 ----------------------PLTFPRIGVSSSKEF-----EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 385 ----------------------~~~~p~~~~~~~~~~-----~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..............+ .....+.++|.+||+.||++||++. +++.||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~----eil~~~~f 316 (316)
T cd07842 242 GTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAE----EALEHPYF 316 (316)
T ss_pred CCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHH----HHhcCCCC
Confidence 000000000000000 1223588999999999999999987 99999998
No 266
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.4e-41 Score=330.57 Aligned_cols=255 Identities=27% Similarity=0.426 Sum_probs=209.3
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
-|++++.||+|+||.||+|.+.. .+..||||++...... .....+.+|+.+++.++||||+++++++..+...
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~-----~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 77 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNR-----TQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL 77 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECC-----CCcEEEEEEeccccch--HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeE
Confidence 47888999999999999998876 4678999998644322 3345677899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+++++|.+++.. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+...
T Consensus 78 ~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 78 WIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred EEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 999999999999988864 46899999999999999999999999999999999999999999999999987432110
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
..
T Consensus 155 ------------------------------------------------------------------------------~~ 156 (277)
T cd06641 155 ------------------------------------------------------------------------------QI 156 (277)
T ss_pred ------------------------------------------------------------------------------hh
Confidence 00
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...........+..... +..... ....
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~ 228 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNP--PTLEGN------YSKP 228 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCC--CCCCcc------cCHH
Confidence 01223588899999999888889999999999999999999999987776655555433321 111111 1235
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
+.++|.+||..+|.+||++. ++++||||...
T Consensus 229 ~~~~i~~~l~~~p~~Rp~~~----~~l~~~~~~~~ 259 (277)
T cd06641 229 LKEFVEACLNKEPSFRPTAK----ELLKHKFIVRF 259 (277)
T ss_pred HHHHHHHHccCChhhCcCHH----HHHhCHHHhhh
Confidence 88999999999999999987 99999999764
No 267
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.1e-41 Score=327.89 Aligned_cols=249 Identities=25% Similarity=0.328 Sum_probs=205.5
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
.+..+|++.+.||.|+||.||+|.+.. +..+|+|++...... ....+..|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~------~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 73 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKN------RVRVAIKILKSDDLL---KQQDFQKEVQALKRLRHKHLISLFAVCSV 73 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecC------CCcEEEEeccccchh---hHHHHHHHHHHHhcCCCcchhheeeeEec
Confidence 445789999999999999999999875 467899998765432 23356679999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
....|+||||+++|+|.+++....+..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~ 153 (261)
T cd05148 74 GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARL 153 (261)
T ss_pred CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhh
Confidence 99999999999999999999876667799999999999999999999999999999999999999999999999999743
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
.....
T Consensus 154 ~~~~~--------------------------------------------------------------------------- 158 (261)
T cd05148 154 IKEDV--------------------------------------------------------------------------- 158 (261)
T ss_pred cCCcc---------------------------------------------------------------------------
Confidence 21000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.......++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+.+..+.+..+... ...+... ..
T Consensus 159 ---~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~-~~---- 229 (261)
T cd05148 159 ---YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-YRMPCPA-KC---- 229 (261)
T ss_pred ---ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-CcCCCCC-CC----
Confidence 00012235678999999998889999999999999999998 89999988877777766643 2222111 11
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..+.++|.+||..||.+||++.
T Consensus 230 --~~~~~~~i~~~l~~~p~~Rpt~~ 252 (261)
T cd05148 230 --PQEIYKIMLECWAAEPEDRPSFK 252 (261)
T ss_pred --CHHHHHHHHHHcCCCchhCcCHH
Confidence 12488999999999999999997
No 268
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.4e-41 Score=329.46 Aligned_cols=254 Identities=20% Similarity=0.295 Sum_probs=203.9
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
..+|++.++||+|+||.||+|..........+..+|+|.+..... .....+.+|+.+++.++|+||+++++++.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---SARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH---HHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 467899999999999999999876433334567899998865332 23346777999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCC-------------CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPG-------------KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGH 229 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~ 229 (489)
..|+||||+++|+|.+++..... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC
Confidence 99999999999999998876421 35888999999999999999999999999999999999999999
Q ss_pred EEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCc
Q 011302 230 IMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQ 309 (489)
Q Consensus 230 vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (489)
+||+|||++..+.....
T Consensus 161 ~kL~dfg~~~~~~~~~~--------------------------------------------------------------- 177 (280)
T cd05092 161 VKIGDFGMSRDIYSTDY--------------------------------------------------------------- 177 (280)
T ss_pred EEECCCCceeEcCCCce---------------------------------------------------------------
Confidence 99999999743211000
Q ss_pred cccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCC-C
Q 011302 310 ELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPL-T 387 (489)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~ 387 (489)
........+++.|+|||.+.+..++.++|||||||++|||++ |.+||......+....+..+.. .
T Consensus 178 -------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 244 (280)
T cd05092 178 -------------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELE 244 (280)
T ss_pred -------------eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCC
Confidence 000112246788999999999999999999999999999998 9999988777776666655422 1
Q ss_pred CCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 388 FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 388 ~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+. .. +..+.+||.+||..||.+||++.
T Consensus 245 ~~~---~~------~~~~~~li~~cl~~~P~~Rp~~~ 272 (280)
T cd05092 245 RPR---TC------PPEVYAIMQGCWQREPQQRMVIK 272 (280)
T ss_pred CCC---CC------CHHHHHHHHHHccCChhhCCCHH
Confidence 111 11 12488999999999999999997
No 269
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=8.6e-42 Score=342.47 Aligned_cols=263 Identities=30% Similarity=0.410 Sum_probs=207.0
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++++.||+|+||.||+|.+.. ++..||||++.+... .......+..|+.+|+.++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRR-----TGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL 87 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECC-----CCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence 4789999999999999999999876 578899999865321 1223345677999999999999999999987654
Q ss_pred ------eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 163 ------YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 163 ------~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
.+|+||||+ |++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus 88 ~~~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 88 SLDRFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cccccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 469999999 8899888764 468999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
++.....
T Consensus 164 ~~~~~~~------------------------------------------------------------------------- 170 (343)
T cd07880 164 LARQTDS------------------------------------------------------------------------- 170 (343)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 9732210
Q ss_pred ccccccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCC----
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRI---- 391 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~---- 391 (489)
......|++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+......++.......+..
T Consensus 171 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07880 171 --------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK 242 (343)
T ss_pred --------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 0112357889999999876 357899999999999999999999999877665555544321111100
Q ss_pred -------------CCCCchhH-----HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 392 -------------GVSSSKEF-----EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 392 -------------~~~~~~~~-----~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.......+ .....+.+||.+||+.||++||++. +++.||||+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~----~~l~~~~~~~~~ 305 (343)
T cd07880 243 LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAA----EALAHPYFEEFH 305 (343)
T ss_pred hcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHH----HHhcCccHhhhc
Confidence 00000000 1123588999999999999999987 999999998764
No 270
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.5e-41 Score=323.92 Aligned_cols=259 Identities=27% Similarity=0.419 Sum_probs=207.5
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHH--HHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA--LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
.+|++.+.||+|+||.||+|.+.. +++.||+|.+..+. .........+.+|+.+++.++||||+++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDAD-----TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcC-----CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC
Confidence 579999999999999999999876 57889999875321 11234456778899999999999999999998764
Q ss_pred --ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 162 --HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 162 --~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
..+++||||+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 77 EEKKLSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 5689999999999999988765 458899999999999999999999999999999999999999999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.......
T Consensus 155 ~~~~~~~------------------------------------------------------------------------- 161 (264)
T cd06653 155 RIQTICM------------------------------------------------------------------------- 161 (264)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 3211000
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.........|+..|+|||.+.+..++.++|||||||++|+|++|+.||........+.++...+.. +.....
T Consensus 162 --~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~p~~----- 233 (264)
T cd06653 162 --SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTK-PMLPDG----- 233 (264)
T ss_pred --cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCC-CCCCcc-----
Confidence 000112346889999999999988999999999999999999999999887766666555443221 111111
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
....+.++|.+||. +|..||++. +++.|||.
T Consensus 234 -~~~~~~~~i~~~l~-~~~~r~~~~----~~~~~~~~ 264 (264)
T cd06653 234 -VSDACRDFLKQIFV-EEKRRPTAE----FLLRHPFV 264 (264)
T ss_pred -cCHHHHHHHHHHhc-CcccCccHH----HHhcCCCC
Confidence 11258999999999 579999997 99999983
No 271
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-42 Score=342.76 Aligned_cols=258 Identities=26% Similarity=0.302 Sum_probs=200.5
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
++++|.-...||+|+||.||+|...+ +..||||.+....... ..+|..|+.+|.+++|||+|+|+|+|.+.
T Consensus 73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~------~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~ 143 (361)
T KOG1187|consen 73 ATNNFSESNLIGEGGFGTVYKGVLSD------GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEG 143 (361)
T ss_pred HHhCCchhcceecCCCeEEEEEEECC------CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecC
Confidence 45899999999999999999999886 3789999887654321 34488899999999999999999999988
Q ss_pred c-eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCC---CeeecCCCCCeEeccCCcEEEcccCC
Q 011302 162 H-YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMG---IVYRDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 162 ~-~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDIKp~NILl~~~~~vkl~DFG~ 237 (489)
+ +.+||+|||++|+|.+++.......++|.....|+.+++.||+|||+.. |||||||+.|||||+++.+||+|||+
T Consensus 144 ~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGL 223 (361)
T KOG1187|consen 144 GEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGL 223 (361)
T ss_pred CceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccC
Confidence 8 5999999999999999998764338999999999999999999999854 99999999999999999999999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
|+..+...
T Consensus 224 a~~~~~~~------------------------------------------------------------------------ 231 (361)
T KOG1187|consen 224 AKLGPEGD------------------------------------------------------------------------ 231 (361)
T ss_pred cccCCccc------------------------------------------------------------------------
Confidence 84322100
Q ss_pred cccccccCCccc-cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC---cH--HHH-HHHhcCCCCCCC
Q 011302 318 VAEPINARSKSF-VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN---NE--KTL-INILKKPLTFPR 390 (489)
Q Consensus 318 ~~~~~~~~~~~~-~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~---~~--~~~-~~i~~~~~~~p~ 390 (489)
...... .||.+|+|||.+.....+.++|||||||+|.||++|+.+.+... .. ..+ ....... ....
T Consensus 232 ------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~-~~~e 304 (361)
T KOG1187|consen 232 ------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG-KLRE 304 (361)
T ss_pred ------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc-chhh
Confidence 000111 69999999999988888999999999999999999999887532 11 111 1111111 1111
Q ss_pred CCCCCc--hhH---HHHhhHHHHHHHHhhcCcccccCCCCCh
Q 011302 391 IGVSSS--KEF---EEVVKLQDLISKLLVKNPKKRIGSLKGS 427 (489)
Q Consensus 391 ~~~~~~--~~~---~~~~~l~~li~~~L~~dP~~R~~~~~~~ 427 (489)
+..+.. ..+ .....+..+..+|++.+|.+||++.+.+
T Consensus 305 iiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 305 IVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred eeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 111110 111 3455688999999999999999997433
No 272
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=9.7e-42 Score=340.86 Aligned_cols=270 Identities=23% Similarity=0.319 Sum_probs=207.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee----
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE---- 159 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~---- 159 (489)
++|.+.+.||+|+||.||+|.+.. +++.||+|++...... ......+.+|+.+|+.++||||+++++++.
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 78 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTR-----SGKKVAIKKIPHAFDV-PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA 78 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcC-----CCCEEEEEEecccccc-ccchHHHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence 689999999999999999999887 5778999998754321 123455667999999999999999999886
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
....+|+||||+ +|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.
T Consensus 79 ~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 79 DFKDVYVVMDLM-ESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred CCceEEEEEehh-hhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccce
Confidence 345789999999 57898888654 559999999999999999999999999999999999999999999999999974
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.......
T Consensus 156 ~~~~~~~------------------------------------------------------------------------- 162 (334)
T cd07855 156 GLSSSPT------------------------------------------------------------------------- 162 (334)
T ss_pred eecccCc-------------------------------------------------------------------------
Confidence 3211000
Q ss_pred cccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC------------
Q 011302 320 EPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL------------ 386 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 386 (489)
..........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.+....+..+.....
T Consensus 163 -~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 163 -EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred -CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 00011123478999999999876 4579999999999999999999999988765444333222100
Q ss_pred --------CCCCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 387 --------TFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 387 --------~~p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.++......... ......+.+||.+||+.+|++||++. +++.||||++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~----~~l~~~~~~~~~ 301 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVE----QALQHPFLAQYH 301 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHH----HHHhChhhhhcc
Confidence 001000000000 01234689999999999999999987 999999998754
No 273
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-41 Score=332.44 Aligned_cols=260 Identities=19% Similarity=0.258 Sum_probs=205.9
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCC--CCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCccccc
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPM--VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLY 155 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~ 155 (489)
+.+..++|.+.+.||+|+||.||+|++.... .......||+|.+..... ......+.+|+.+++.+ +||||++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc--hHHHHHHHHHHHHHHhhccCCCchhee
Confidence 4566789999999999999999999865321 112456899999875422 23345677899999999 899999999
Q ss_pred ceeecCceEEEEEeecCCCchHHHHHhCC--------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCC
Q 011302 156 AEFEASHYSCLVMEYCPGGDLYAARQRQP--------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPEN 221 (489)
Q Consensus 156 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~N 221 (489)
+++......|+||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 167 (304)
T cd05101 88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN 167 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence 99999999999999999999999987642 2357778889999999999999999999999999999
Q ss_pred eEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 011302 222 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 301 (489)
Q Consensus 222 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
||++.++.+||+|||+++.+.....
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~------------------------------------------------------- 192 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDY------------------------------------------------------- 192 (304)
T ss_pred EEEcCCCcEEECCCccceecccccc-------------------------------------------------------
Confidence 9999999999999999854321000
Q ss_pred cCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHH
Q 011302 302 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLIN 380 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 380 (489)
........+++.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....
T Consensus 193 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~ 251 (304)
T cd05101 193 ---------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 251 (304)
T ss_pred ---------------------cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 000112246678999999999889999999999999999998 8999998877777666
Q ss_pred HhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 381 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 381 i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..... .... .. ....+.+||.+||..+|.+||++.
T Consensus 252 ~~~~~~-~~~~-~~------~~~~~~~li~~cl~~~p~~Rps~~ 287 (304)
T cd05101 252 LKEGHR-MDKP-AN------CTNELYMMMRDCWHAIPSHRPTFK 287 (304)
T ss_pred HHcCCc-CCCC-CC------CCHHHHHHHHHHcccChhhCCCHH
Confidence 654322 1111 11 123589999999999999999987
No 274
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.3e-41 Score=326.35 Aligned_cols=248 Identities=24% Similarity=0.301 Sum_probs=200.2
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|++.++||+|+||.||+|++.+ ...||+|.+...... ..++.+|+.+++.++||||+++++.+..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~------~~~valK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 72 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNG------TTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE 72 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecC------CceEEEEecccCccC----HHHHHHHHHHHHhCCCCCcceEEEEECC
Confidence 456789999999999999999998765 235899999754322 2356779999999999999999998754
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
...|+||||+++|+|.+++....+..+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~ 151 (262)
T cd05071 73 -EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 151 (262)
T ss_pred -CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceee
Confidence 5689999999999999999875556689999999999999999999999999999999999999999999999999843
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+....
T Consensus 152 ~~~~~--------------------------------------------------------------------------- 156 (262)
T cd05071 152 IEDNE--------------------------------------------------------------------------- 156 (262)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 32100
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
........++..|+|||++.+..++.++|||||||++|||++ |..||.+....+....+.... ..+...
T Consensus 157 --~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~------- 226 (262)
T cd05071 157 --YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMPCPP------- 226 (262)
T ss_pred --cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-CCCCcc-------
Confidence 000012246778999999998889999999999999999999 899998887777766665432 111111
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..+..+.+||.+||+.||++||++.
T Consensus 227 ~~~~~l~~li~~~l~~~p~~Rp~~~ 251 (262)
T cd05071 227 ECPESLHDLMCQCWRKEPEERPTFE 251 (262)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHH
Confidence 1123588999999999999999986
No 275
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.6e-41 Score=327.98 Aligned_cols=261 Identities=20% Similarity=0.287 Sum_probs=211.5
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++++.||+|+||.||+|+.+........+.|++|.+..... ......+.+|+.++++++|+||+++++++.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 468999999999999999999987655455677899999865432 124456777999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCC-------CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPG-------KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~-------~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
..|+||||+++|+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999999876531 16899999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+++......
T Consensus 162 ~~~~~~~~~~---------------------------------------------------------------------- 171 (275)
T cd05046 162 SLSKDVYNSE---------------------------------------------------------------------- 171 (275)
T ss_pred ccccccCccc----------------------------------------------------------------------
Confidence 9873211000
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 394 (489)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+......+..+..+...++....
T Consensus 172 -------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 243 (275)
T cd05046 172 -------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEG- 243 (275)
T ss_pred -------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCC-
Confidence 001112246778999999988888999999999999999998 89999887777777776655544432211
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
. +..+.++|.+||..||++||++. +++.+
T Consensus 244 ~------~~~l~~~i~~~l~~~p~~Rp~~~----~~l~~ 272 (275)
T cd05046 244 C------PSRLYKLMTRCWAVNPKDRPSFS----ELVSA 272 (275)
T ss_pred C------CHHHHHHHHHHcCCCcccCCCHH----HHHHH
Confidence 1 12589999999999999999987 66653
No 276
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-41 Score=334.03 Aligned_cols=258 Identities=21% Similarity=0.273 Sum_probs=202.5
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCC--CCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccc
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVG--LPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYA 156 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~ 156 (489)
++..++|.+.+.||+|+||.||+|++.+.... .....||+|.+..+.. .....++..|+.+++.+ +||||+++++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLG 91 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC--hHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 44557899999999999999999987643221 2345799999975421 12345677799999999 7999999999
Q ss_pred eeecCceEEEEEeecCCCchHHHHHhCC--------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCe
Q 011302 157 EFEASHYSCLVMEYCPGGDLYAARQRQP--------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENV 222 (489)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NI 222 (489)
++...+..|+||||+++|+|.+++.... ...+++.++..++.||+.||+|||++|++||||||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 171 (307)
T cd05098 92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 171 (307)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence 9999999999999999999999987642 13588889999999999999999999999999999999
Q ss_pred EeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCcccccccccccccccccccccccccccc
Q 011302 223 LVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQV 302 (489)
Q Consensus 223 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (489)
|++.++.+||+|||+++.+.....
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~-------------------------------------------------------- 195 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDY-------------------------------------------------------- 195 (307)
T ss_pred EEcCCCcEEECCCcccccccccch--------------------------------------------------------
Confidence 999999999999999743211000
Q ss_pred CCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHH
Q 011302 303 DGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINI 381 (489)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i 381 (489)
........+++.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+
T Consensus 196 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~ 255 (307)
T cd05098 196 --------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 255 (307)
T ss_pred --------------------hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence 000011134578999999999889999999999999999998 89999887766655555
Q ss_pred hcCCC-CCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 382 LKKPL-TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 382 ~~~~~-~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..... ..+. .. ..++.+||.+||..+|++||++.
T Consensus 256 ~~~~~~~~~~---~~------~~~~~~li~~~l~~~p~~Rps~~ 290 (307)
T cd05098 256 KEGHRMDKPS---NC------TNELYMMMRDCWHAVPSQRPTFK 290 (307)
T ss_pred HcCCCCCCCC---cC------CHHHHHHHHHHcccChhhCcCHH
Confidence 44321 1111 11 12588999999999999999997
No 277
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.4e-41 Score=330.11 Aligned_cols=257 Identities=25% Similarity=0.463 Sum_probs=206.5
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC---CCCcccccceeecC
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD---HPFLPTLYAEFEAS 161 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~ 161 (489)
.|++++.||+|+||.||+|.+.. .++.||+|.+..... .....++.+|+.+++.++ ||||+++++++..+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~-----~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~ 74 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVP-----TGRVVALKIINLDTP--DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG 74 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcC-----CCcEEEEEEecCCCC--chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC
Confidence 47888999999999999999876 568899999864321 123345667888888886 99999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
...|+||||++|++|.+++.. ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++..+
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 75 PRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALL 151 (277)
T ss_pred CEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence 999999999999999998865 36899999999999999999999999999999999999999999999999987432
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
...
T Consensus 152 ~~~----------------------------------------------------------------------------- 154 (277)
T cd06917 152 NQN----------------------------------------------------------------------------- 154 (277)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 110
Q ss_pred cccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 322 INARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
........|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+.......+... ..+..... .
T Consensus 155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~-----~ 226 (277)
T cd06917 155 -SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KPPRLEDN-----G 226 (277)
T ss_pred -ccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC--CCCCCCcc-----c
Confidence 001122368899999999875 44689999999999999999999999887665544333222 11111111 0
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
...++.+||.+||..||++||++. +++.|+||+...
T Consensus 227 ~~~~~~~~i~~~l~~~p~~R~~~~----~il~~~~~~~~~ 262 (277)
T cd06917 227 YSKLLREFVAACLDEEPKERLSAE----ELLKSKWIKAHS 262 (277)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHH----HHhhChHhhccc
Confidence 123589999999999999999987 999999997754
No 278
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.3e-41 Score=331.42 Aligned_cols=262 Identities=27% Similarity=0.411 Sum_probs=204.5
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++.+.||.|+||.||+|++.. ++..||||++...... .....+.+|+.+++.++||||+++++++.+.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 73 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRT-----TGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKL 73 (284)
T ss_pred CceEeeeeccCCceEEEEEEECC-----CCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcE
Confidence 58999999999999999999876 5788999998754321 1234456699999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCC-CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 165 CLVMEYCPGGDLYAARQRQP-GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
|+||||++ ++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 74 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~ 152 (284)
T cd07836 74 MLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGI 152 (284)
T ss_pred EEEEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcC
Confidence 99999996 58888776542 24689999999999999999999999999999999999999999999999998732211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
..
T Consensus 153 ~~------------------------------------------------------------------------------ 154 (284)
T cd07836 153 PV------------------------------------------------------------------------------ 154 (284)
T ss_pred Cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred cCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC---CC-------------
Q 011302 324 ARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK---PL------------- 386 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~---~~------------- 386 (489)
.......+|+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+...++... +.
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 001122578899999998764 4688999999999999999999999988776655544321 00
Q ss_pred --CCCCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 387 --TFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 387 --~~p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.+|......... ......+.++|.+||+.||.+||++. ++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~----~~l~~~~f 284 (284)
T cd07836 235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAH----DALQHPWF 284 (284)
T ss_pred cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHH----HHhcCCCC
Confidence 000000000000 01234688999999999999999987 99999998
No 279
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-42 Score=309.46 Aligned_cols=266 Identities=22% Similarity=0.295 Sum_probs=205.8
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
.+..++|++.+.||+|||+-||+++.-. +.+.||+|.+..... +..+.+++|++..++++||||++++++..
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s-----~~~~YAlKkI~c~~~---~~~e~~~rEid~~rkf~s~~vl~l~dh~l 88 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLS-----TGHLYALKKILCHSQ---EDIEEALREIDNHRKFNSPNVLRLVDHQL 88 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccC-----cccchhhheeeccch---HHHHHHHHHHHHHHhhCCcchHHHHHHHH
Confidence 3566899999999999999999999665 678999999986652 34567778999999999999999999875
Q ss_pred cCc-----eEEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCC--CeeecCCCCCeEeccCCcE
Q 011302 160 ASH-----YSCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMG--IVYRDLKPENVLVREDGHI 230 (489)
Q Consensus 160 ~~~-----~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDIKp~NILl~~~~~v 230 (489)
.+. ..||+++|...|+|.+.+++. ++..+++.++..|+.+|++||++||+.. ++||||||.|||+...+.+
T Consensus 89 ~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~ 168 (302)
T KOG2345|consen 89 REEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLP 168 (302)
T ss_pred HhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCce
Confidence 333 589999999999999887754 4457999999999999999999999998 9999999999999999999
Q ss_pred EEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCcc
Q 011302 231 MLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQE 310 (489)
Q Consensus 231 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (489)
+|.|||.++.....-. .... .. ++
T Consensus 169 vl~D~GS~~~a~i~i~---~~~~---a~--------------------------------------~l------------ 192 (302)
T KOG2345|consen 169 VLMDLGSATQAPIQIE---GSRQ---AL--------------------------------------RL------------ 192 (302)
T ss_pred EEEeccCccccceEee---chHH---HH--------------------------------------HH------------
Confidence 9999998743321000 0000 00 00
Q ss_pred ccCCccccccccccCCccccCCCCccCcchhcCCC---CCCcccHHHHHHHHHHHhhCCCCCCCCCcH--HHHHHHhcCC
Q 011302 311 LLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNE--KTLINILKKP 385 (489)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~~~ 385 (489)
.++ ..-..|..|+|||.+.-+. .+.++|||||||+||+|+.|..||...... .+...+...+
T Consensus 193 --------Qe~-----a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q 259 (302)
T KOG2345|consen 193 --------QEW-----AEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQ 259 (302)
T ss_pred --------HHH-----HHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccc
Confidence 000 0113578899999986543 588999999999999999999999643221 1222345566
Q ss_pred CCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 386 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 386 ~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
+.+|.....+ ..+.+||..||+.||.+||++. +++.+
T Consensus 260 ~s~P~~~~ys-------e~l~~lik~mlqvdP~qRP~i~----~ll~~ 296 (302)
T KOG2345|consen 260 ISIPNSSRYS-------EALHQLIKSMLQVDPNQRPTIP----ELLSK 296 (302)
T ss_pred cccCCCCCcc-------HHHHHHHHHHhcCCcccCCCHH----HHHHH
Confidence 7777654422 2489999999999999999997 66654
No 280
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.9e-41 Score=329.75 Aligned_cols=263 Identities=28% Similarity=0.433 Sum_probs=215.7
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..+.|.+...||+|+||.||+|.+.. .+..|++|++..... ....+..|+.+++.++|+||+++++++...
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 87 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRA-----TGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVG 87 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEcc-----CCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC
Confidence 34679999999999999999999885 467899999975432 344566799999999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
...|+|+||++|++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++...
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 88 DELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred CEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 99999999999999999998753 37999999999999999999999999999999999999999999999999986321
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
...
T Consensus 167 ~~~----------------------------------------------------------------------------- 169 (286)
T cd06614 167 TKE----------------------------------------------------------------------------- 169 (286)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......+....... ..... ..
T Consensus 170 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~----~~ 242 (286)
T cd06614 170 -KSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPP--LKNPE----KW 242 (286)
T ss_pred -hhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC--Ccchh----hC
Confidence 000122357889999999998889999999999999999999999998877666555554432211 11000 01
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 442 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~ 442 (489)
...+.+||.+||+.+|.+||++. +++.|+||+...|.
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~----~il~~~~~~~~~~~ 279 (286)
T cd06614 243 SPEFKDFLNKCLVKDPEKRPSAE----ELLQHPFLKKACPK 279 (286)
T ss_pred CHHHHHHHHHHhccChhhCcCHH----HHhhChHhhccCch
Confidence 23589999999999999999997 99999999997664
No 281
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.9e-41 Score=339.21 Aligned_cols=266 Identities=23% Similarity=0.316 Sum_probs=204.2
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC--
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS-- 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-- 161 (489)
.+|.+.+.||+|+||+||+|++.. +++.||||.+...... .....++.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~ 78 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSE-----TNEKVAIKKIANAFDN-RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR 78 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecC-----CCCeEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCccchHHheecccc
Confidence 579999999999999999999876 5789999998753221 22234566799999999999999999988644
Q ss_pred ---ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 162 ---HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 162 ---~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
...|+||||+ +++|.+++... ..+++..+..++.||+.||.|||+++++||||||+|||++.++.+||+|||++
T Consensus 79 ~~~~~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 79 EAFNDVYIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred cccCcEEEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 3589999999 57898888764 57999999999999999999999999999999999999999999999999998
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+......
T Consensus 156 ~~~~~~~------------------------------------------------------------------------- 162 (337)
T cd07858 156 RTTSEKG------------------------------------------------------------------------- 162 (337)
T ss_pred cccCCCc-------------------------------------------------------------------------
Confidence 4321100
Q ss_pred ccccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc---CCCC-------
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---KPLT------- 387 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~~------- 387 (489)
.......|+..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.......+.. .+..
T Consensus 163 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07858 163 -----DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR 237 (337)
T ss_pred -----ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcC
Confidence 01123357889999999875 4588999999999999999999999987654333322211 0000
Q ss_pred ----------CCCCCCCCch--hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 388 ----------FPRIGVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 388 ----------~p~~~~~~~~--~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.+........ .......+.+||.+||+.+|++||++. ++++||||+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~----ell~h~~~~~~~ 298 (337)
T cd07858 238 NEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVE----EALAHPYLASLH 298 (337)
T ss_pred chhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHH----HHHcCcchhhhc
Confidence 0000000000 001234588999999999999999987 999999998753
No 282
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-42 Score=365.37 Aligned_cols=258 Identities=24% Similarity=0.352 Sum_probs=212.1
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..+...+.+.||+|.||.||.|...+.........||||.+++.. ..+....|.+|..+|+.++|||||+++|++-+
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 4467888999999999999999999874333335568999987643 23566788999999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCC-----CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQP-----GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
....+|++|||.||||..+++... ...++..+...++.||++|+.||+++++|||||.++|+||+....|||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 999999999999999999998751 356888999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+|+.... ...|++.
T Consensus 847 GlArDiy~-------------~~yyr~~---------------------------------------------------- 861 (1025)
T KOG1095|consen 847 GLARDIYD-------------KDYYRKH---------------------------------------------------- 861 (1025)
T ss_pred chhHhhhh-------------chheecc----------------------------------------------------
Confidence 99953211 1111110
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 394 (489)
..-.-...|||||.+....++.++|||||||+|||+++ |..||.+.++.+++...+.+..-.+...++
T Consensus 862 -----------~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~CP 930 (1025)
T KOG1095|consen 862 -----------GEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYCP 930 (1025)
T ss_pred -----------CccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCCC
Confidence 00112357999999999999999999999999999997 999999999999998777665222222232
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
. .+.+||..||+.+|++||++.
T Consensus 931 ~--------~ly~lM~~CW~~~pe~RP~F~ 952 (1025)
T KOG1095|consen 931 E--------KLYQLMLQCWKHDPEDRPSFR 952 (1025)
T ss_pred h--------HHHHHHHHHccCChhhCccHH
Confidence 2 377999999999999999987
No 283
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.4e-41 Score=325.53 Aligned_cols=250 Identities=22% Similarity=0.325 Sum_probs=201.5
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
|++..++|++.+.||+|+||.||+|.+.. +..+|+|.+...... ...+.+|+.++++++|+||+++++++
T Consensus 1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~------~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~ 70 (260)
T cd05070 1 WEIPRESLQLIKKLGNGQFGEVWMGTWNG------NTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVV 70 (260)
T ss_pred CCCchHHhhhhheeccccCceEEEEEecC------CceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEE
Confidence 34566899999999999999999998764 356899998754322 23467799999999999999999987
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
.. ...|+||||+++++|.+++.......+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++
T Consensus 71 ~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~ 149 (260)
T cd05070 71 SE-EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLA 149 (260)
T ss_pred CC-CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceee
Confidence 54 56899999999999999987765567899999999999999999999999999999999999999999999999998
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
..+....
T Consensus 150 ~~~~~~~------------------------------------------------------------------------- 156 (260)
T cd05070 150 RLIEDNE------------------------------------------------------------------------- 156 (260)
T ss_pred eeccCcc-------------------------------------------------------------------------
Confidence 4321100
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCch
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |.+||.+.+..+....+.... ..+... .
T Consensus 157 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~-~--- 227 (260)
T cd05070 157 ----YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-RMPCPQ-D--- 227 (260)
T ss_pred ----cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCC-c---
Confidence 000011235668999999998889999999999999999999 999999888777777665431 222111 1
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
....+.+||.+||..+|++||++.
T Consensus 228 ---~~~~~~~li~~~l~~~p~~Rpt~~ 251 (260)
T cd05070 228 ---CPISLHELMLQCWKKDPEERPTFE 251 (260)
T ss_pred ---CCHHHHHHHHHHcccCcccCcCHH
Confidence 112589999999999999999986
No 284
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=6.5e-41 Score=320.90 Aligned_cols=256 Identities=33% Similarity=0.540 Sum_probs=213.2
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|.+.+.||.|+||.||+|.+.. +++.|++|++...... ......+..|+.+++.++|||++++++.+..+...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~ 74 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKS-----DGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKL 74 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcC-----CCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEE
Confidence 58899999999999999999876 4678999999765432 23344567799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCC--CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 165 CLVMEYCPGGDLYAARQRQP--GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
++||||+++++|.+++.... +..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 154 (258)
T cd08215 75 CIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLS 154 (258)
T ss_pred EEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecc
Confidence 99999999999999887643 4679999999999999999999999999999999999999999999999999973321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 155 ~~------------------------------------------------------------------------------ 156 (258)
T cd08215 155 ST------------------------------------------------------------------------------ 156 (258)
T ss_pred cC------------------------------------------------------------------------------
Confidence 10
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~ 402 (489)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+..+....+....... ..... .
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~------~ 228 (258)
T cd08215 157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPP--IPSQY------S 228 (258)
T ss_pred cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCC--CCCCC------C
Confidence 001123368899999999999889999999999999999999999998887776666665543211 11111 1
Q ss_pred hhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..+.++|.+||..+|++||++. ++++||||
T Consensus 229 ~~~~~~i~~~l~~~p~~Rp~~~----~ll~~~~~ 258 (258)
T cd08215 229 SELRNLVSSLLQKDPEERPSIA----QILQSPFI 258 (258)
T ss_pred HHHHHHHHHHcCCChhhCcCHH----HHhcCCCC
Confidence 2489999999999999999998 99999998
No 285
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.9e-41 Score=338.93 Aligned_cols=262 Identities=26% Similarity=0.359 Sum_probs=204.2
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC-
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~- 161 (489)
.++|.+.+.||+|+||.||+|.+.. +++.||+|++.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTK-----TGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcC-----CCeEEEEEEecCcchh-hHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 3789999999999999999999876 5788999999754322 12334566799999999999999999988543
Q ss_pred -----ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 162 -----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 162 -----~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
...|+|++++ |++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg 165 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 165 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccc
Confidence 3578999988 8899887764 358999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+++...
T Consensus 166 ~~~~~~-------------------------------------------------------------------------- 171 (345)
T cd07877 166 LARHTD-------------------------------------------------------------------------- 171 (345)
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 873210
Q ss_pred ccccccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCC------
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP------ 389 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p------ 389 (489)
.......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.+.+....+..+.......+
T Consensus 172 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T cd07877 172 -------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 244 (345)
T ss_pred -------ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 00122358899999999877 4578999999999999999999999987766554444332111000
Q ss_pred --------------CCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 390 --------------RIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 390 --------------~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
......... ......+.+||.+||..||.+|+++. +++.||||+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~----e~l~h~~f~~~ 306 (345)
T cd07877 245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA----QALAHAYFAQY 306 (345)
T ss_pred cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHH----HHhcChhhhhc
Confidence 000000000 01123588999999999999999987 99999999863
No 286
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.2e-41 Score=324.74 Aligned_cols=249 Identities=22% Similarity=0.337 Sum_probs=202.1
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
++..++|+++++||+|+||.||+|..++ ++.||+|.+...... ...+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~------~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~ 71 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYNG------HTKVAIKSLKQGSMS----PEAFLAEANLMKQLQHPRLVRLYAVVT 71 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecCC------CceEEEEEecCCCCc----HHHHHHHHHHHHhcCCcCeeeEEEEEc
Confidence 4566899999999999999999998654 467999998754432 235667999999999999999999875
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
.+..|+||||+.+|+|.+++....+..+++.++..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++.
T Consensus 72 -~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 150 (260)
T cd05067 72 -QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLAR 150 (260)
T ss_pred -cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCccee
Confidence 4578999999999999999877666779999999999999999999999999999999999999999999999999973
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
......
T Consensus 151 ~~~~~~-------------------------------------------------------------------------- 156 (260)
T cd05067 151 LIEDNE-------------------------------------------------------------------------- 156 (260)
T ss_pred ecCCCC--------------------------------------------------------------------------
Confidence 321000
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
........++..|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+.... ..+.... .
T Consensus 157 ---~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~-~--- 228 (260)
T cd05067 157 ---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY-RMPRPDN-C--- 228 (260)
T ss_pred ---cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC-CCCCCCC-C---
Confidence 000112245678999999998889999999999999999998 999999888777666654432 2221111 1
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..++.+||.+||+.+|++||++.
T Consensus 229 ---~~~~~~li~~~l~~~p~~Rp~~~ 251 (260)
T cd05067 229 ---PEELYELMRLCWKEKPEERPTFE 251 (260)
T ss_pred ---CHHHHHHHHHHccCChhhCCCHH
Confidence 12589999999999999999986
No 287
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.7e-41 Score=329.29 Aligned_cols=262 Identities=27% Similarity=0.381 Sum_probs=204.5
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEE
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 165 (489)
|++.+.||.|++|.||+|.++. ++..||+|++..+... ......+.+|+.+++.++||||+++++++.+++..|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~ 74 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKL-----TGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLY 74 (283)
T ss_pred CchheEecCCCCeEEEEEEEcC-----CCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEE
Confidence 6778999999999999999876 5678999998754322 122345667999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCc
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVP 245 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~ 245 (489)
+||||+ +++|.+++.......+++..+..++.|++.||+|||+++++||||+|+||+++.++.++|+|||++.......
T Consensus 75 iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 75 LVFEFL-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred EEEecc-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 999999 5789998877654579999999999999999999999999999999999999999999999999974321100
Q ss_pred cccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccC
Q 011302 246 KLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 325 (489)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (489)
..
T Consensus 154 ------------------------------------------------------------------------------~~ 155 (283)
T cd07835 154 ------------------------------------------------------------------------------RT 155 (283)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred CccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC------------------
Q 011302 326 SKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL------------------ 386 (489)
Q Consensus 326 ~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~------------------ 386 (489)
.....+++.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+......++.....
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKP 235 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhh
Confidence 0112468899999998765 468899999999999999999999988776554444332110
Q ss_pred CCCCCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 387 TFPRIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 387 ~~p~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.++......... ......+.+||.+||+.||.+||++. +++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~----~il~~~~~ 283 (283)
T cd07835 236 TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAK----AALQHPYF 283 (283)
T ss_pred hcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHH----HHhcCCCC
Confidence 011100000000 01123588999999999999999987 99999998
No 288
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.3e-41 Score=332.09 Aligned_cols=260 Identities=19% Similarity=0.239 Sum_probs=203.7
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCC--CCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCccccc
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMV--GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLY 155 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~ 155 (489)
+.+..++|.+.+.||+|+||.||+|++.+... ......||+|++..... ......+..|+.+++.+ +||||++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT--DKDLADLISEMELMKLIGKHKNIINLL 84 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence 34556789999999999999999998754221 12456789999874321 23345577799999999 699999999
Q ss_pred ceeecCceEEEEEeecCCCchHHHHHhCC--------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCC
Q 011302 156 AEFEASHYSCLVMEYCPGGDLYAARQRQP--------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPEN 221 (489)
Q Consensus 156 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~N 221 (489)
+++.+...+|+||||+++|+|.+++.... ...+++.++..++.||+.||.|||++||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 99999999999999999999999987632 2358888999999999999999999999999999999
Q ss_pred eEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 011302 222 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 301 (489)
Q Consensus 222 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
||++.++.+||+|||+++.+......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~------------------------------------------------------ 190 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYY------------------------------------------------------ 190 (314)
T ss_pred EEEcCCCcEEEccccccccccccccc------------------------------------------------------
Confidence 99999999999999998533210000
Q ss_pred cCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHH
Q 011302 302 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLIN 380 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 380 (489)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+..
T Consensus 191 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~ 248 (314)
T cd05099 191 ----------------------KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL 248 (314)
T ss_pred ----------------------cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 00011124567999999999889999999999999999998 9999988877776666
Q ss_pred HhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 381 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 381 i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..+... . ..... ..++.+||.+||..||++||++.
T Consensus 249 ~~~~~~~-~-~~~~~------~~~l~~li~~cl~~~p~~Rps~~ 284 (314)
T cd05099 249 LREGHRM-D-KPSNC------THELYMLMRECWHAVPTQRPTFK 284 (314)
T ss_pred HHcCCCC-C-CCCCC------CHHHHHHHHHHcCCCcccCcCHH
Confidence 6544211 1 11111 12488999999999999999986
No 289
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.2e-41 Score=324.01 Aligned_cols=250 Identities=23% Similarity=0.316 Sum_probs=200.6
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
..+|++.+.||+|+||.||+|+++. ...+|+|++.+.... ...+.+|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~------~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 72 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRG------KIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQR 72 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecC------CccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 3578999999999999999998764 456899998653322 234566999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||++|++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 73 PIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVL 151 (256)
T ss_pred ceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecc
Confidence 9999999999999999987653 468999999999999999999999999999999999999999999999999874221
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
...
T Consensus 152 ~~~----------------------------------------------------------------------------- 154 (256)
T cd05059 152 DDQ----------------------------------------------------------------------------- 154 (256)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||...+..+....+.... ..+... ..
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~-~~------ 226 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY-RLYRPK-LA------ 226 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC-cCCCCC-CC------
Confidence 000011124567999999999889999999999999999998 899998877776666665432 111111 11
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
+..+.+|+.+||..+|++||++. ++++
T Consensus 227 ~~~~~~li~~cl~~~p~~Rpt~~----~~l~ 253 (256)
T cd05059 227 PTEVYTIMYSCWHEKPEDRPAFK----KLLS 253 (256)
T ss_pred CHHHHHHHHHHhcCChhhCcCHH----HHHH
Confidence 12589999999999999999987 6654
No 290
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6.3e-41 Score=326.93 Aligned_cols=261 Identities=29% Similarity=0.390 Sum_probs=204.2
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC---CCCCcccccceeecCc
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFEASH 162 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~~~~ 162 (489)
|++.+.||+|+||.||+|+++. +++.||+|+++..... ......+..|+.+++++ +||||+++++++...+
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 74 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLN-----TGRFVALKKVRVPLSE-EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPR 74 (287)
T ss_pred CeEEEEecccCceEEEEEEECC-----CCCEEEEEEecccccc-chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence 6789999999999999999886 4678999999743221 11223344577666655 6999999999998777
Q ss_pred e-----EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCC
Q 011302 163 Y-----SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 163 ~-----~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~ 237 (489)
. .|+||||+. ++|.+++.......+++..+..++.|++.||.|||+++++|+||||+|||++.++.+||+|||+
T Consensus 75 ~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 75 TDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred CCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCc
Confidence 6 999999995 5898888776545699999999999999999999999999999999999999999999999998
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
+......
T Consensus 154 ~~~~~~~------------------------------------------------------------------------- 160 (287)
T cd07838 154 ARIYSFE------------------------------------------------------------------------- 160 (287)
T ss_pred ceeccCC-------------------------------------------------------------------------
Confidence 7432110
Q ss_pred cccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC-----CCCCC--
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP-----LTFPR-- 390 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-----~~~p~-- 390 (489)
.......|+..|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+.++.... ..++.
T Consensus 161 ------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07838 161 ------MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV 234 (287)
T ss_pred ------cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc
Confidence 00112247889999999999889999999999999999999999999888777666664311 11110
Q ss_pred ---------CCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 391 ---------IGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 391 ---------~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
........ ......+.+||.+||..||.+||++. +++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~----~il~~~~~ 287 (287)
T cd07838 235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAF----EALQHPYF 287 (287)
T ss_pred ccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHH----HHhcCcCC
Confidence 00000000 01234678999999999999999987 99999998
No 291
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.3e-41 Score=325.03 Aligned_cols=255 Identities=21% Similarity=0.286 Sum_probs=200.2
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce--
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY-- 163 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~-- 163 (489)
|++.+.||+|+||.||+|.+.... .....||+|.+..+... ......+..|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~--~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 77 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDD--GSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQ 77 (273)
T ss_pred CccccccCcCCCceEEEEEEecCC--CCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccc
Confidence 577899999999999999986532 13578999998754322 2334567789999999999999999998765443
Q ss_pred ----EEEEEeecCCCchHHHHHhC----CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 164 ----SCLVMEYCPGGDLYAARQRQ----PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 164 ----~~lV~E~~~gg~L~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
.++||||+++|+|..++... ....+++..+..++.|++.||+|||+++|+||||||+|||+++++.+||+||
T Consensus 78 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 78 KIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred cCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCc
Confidence 79999999999998887543 2246889999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+++.+.....
T Consensus 158 g~~~~~~~~~~--------------------------------------------------------------------- 168 (273)
T cd05035 158 GLSKKIYSGDY--------------------------------------------------------------------- 168 (273)
T ss_pred cceeecccccc---------------------------------------------------------------------
Confidence 99843321000
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCC-CCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPL-TFPRIGV 393 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~ 393 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+.+..+..+.. ..|.
T Consensus 169 -------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--- 238 (273)
T cd05035 169 -------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPE--- 238 (273)
T ss_pred -------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc---
Confidence 000111235678999999988889999999999999999999 9999988887777666655421 1111
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
. ....+.++|.+||+.||++||++. ++++
T Consensus 239 ~------~~~~~~~li~~~l~~~p~~Rp~~~----e~~~ 267 (273)
T cd05035 239 D------CLDELYDLMYSCWRADPKDRPTFT----KLRE 267 (273)
T ss_pred C------CCHHHHHHHHHHcCCChhhCcCHH----HHHH
Confidence 1 122589999999999999999987 5554
No 292
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=5.8e-41 Score=327.97 Aligned_cols=258 Identities=22% Similarity=0.303 Sum_probs=204.9
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|++.+.||+|+||.||+|.+.+.....+...||+|++...... .....+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~ 79 (288)
T cd05050 2 YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA--DMQADFQREAALMAEFDHPNIVKLLGVCAV 79 (288)
T ss_pred CChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCH--HHHHHHHHHHHHHHhcCCCchheEEEEEcC
Confidence 345789999999999999999999865333346788999998754321 233557779999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCC--------------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCC
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQP--------------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPE 220 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~ 220 (489)
+...|+||||+++|+|.+++.... ...+++..+..++.||+.||+|||+++++||||||+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ 159 (288)
T cd05050 80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR 159 (288)
T ss_pred CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence 999999999999999999887431 124778888999999999999999999999999999
Q ss_pred CeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 011302 221 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 300 (489)
Q Consensus 221 NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (489)
|||++.++.++|+|||++..+.....
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------------ 185 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADY------------------------------------------------------ 185 (288)
T ss_pred heEecCCCceEECccccceecccCcc------------------------------------------------------
Confidence 99999999999999998743211000
Q ss_pred ccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHH
Q 011302 301 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLI 379 (489)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~ 379 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+...
T Consensus 186 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~ 243 (288)
T cd05050 186 ----------------------YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIY 243 (288)
T ss_pred ----------------------ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 000111234567999999998889999999999999999997 889998888777777
Q ss_pred HHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 380 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 380 ~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+..+... +... . ....+.+||.+||..||++||++.
T Consensus 244 ~~~~~~~~-~~~~-~------~~~~l~~li~~~l~~~p~~Rpt~~ 280 (288)
T cd05050 244 YVRDGNVL-SCPD-N------CPLELYNLMRLCWSKLPSDRPSFA 280 (288)
T ss_pred HHhcCCCC-CCCC-C------CCHHHHHHHHHHcccCcccCCCHH
Confidence 66654332 1111 1 112589999999999999999997
No 293
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-43 Score=316.99 Aligned_cols=269 Identities=27% Similarity=0.374 Sum_probs=209.9
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee----
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE---- 159 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~---- 159 (489)
+.|.-..+||+|.||+||+|+.++ +++.||+|++--+... ........+|+.+|..|.|+||+.+++.|.
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n-----~~kkvalkkvlmeneK-eGfpitalreikiL~~lkHenv~nliEic~tk~T 90 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKN-----TGKKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKAT 90 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcC-----ccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccC
Confidence 456677889999999999999988 4566888876432211 123344667999999999999999999884
Q ss_pred ----cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 160 ----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 160 ----~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
+...+||||.+| .-+|..++... ..+|+..+++.++.++..||.|+|.+.|+|||+|++|+||+.+|.+||+||
T Consensus 91 p~~r~r~t~ylVf~~c-ehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 91 PTNRDRATFYLVFDFC-EHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred CcccccceeeeeHHHh-hhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecc
Confidence 233589999999 46888887654 367999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+|+.+....+..
T Consensus 169 Glar~fs~~~n~~------------------------------------------------------------------- 181 (376)
T KOG0669|consen 169 GLARAFSTSKNVV------------------------------------------------------------------- 181 (376)
T ss_pred ccccceecccccC-------------------------------------------------------------------
Confidence 9996654322211
Q ss_pred cccccccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc--CC---CCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK--KP---LTFP 389 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~--~~---~~~p 389 (489)
..+.+..+-|.+|++||.+.|.. |+++.|||..|||+.||++|.+.|.+.++.+++..|.. +. -.||
T Consensus 182 -------kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP 254 (376)
T KOG0669|consen 182 -------KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP 254 (376)
T ss_pred -------CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence 12344557799999999999865 89999999999999999999999999998887776642 11 1122
Q ss_pred CCCC------C---------------CchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 390 RIGV------S---------------SSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 390 ~~~~------~---------------~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
.... . ..+.|-.+.++.||+.+||..||.+|+.+. +++.|.||..
T Consensus 255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad----~alnh~~F~k 320 (376)
T KOG0669|consen 255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDAD----QALNHDFFWK 320 (376)
T ss_pred CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchH----hhhchhhhhc
Confidence 1100 0 000111223578999999999999999998 9999999965
No 294
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.1e-40 Score=330.29 Aligned_cols=257 Identities=27% Similarity=0.392 Sum_probs=207.5
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
+-|...+.||+|+||+||+|++.. .+..|++|++.............+..|+.+++.++||||+++++++.+...
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 95 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSH-----TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHT 95 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECC-----CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCE
Confidence 347777889999999999999876 568899999875443333444567779999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||+. |+|.+++... ...+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~- 172 (313)
T cd06633 96 AWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS- 172 (313)
T ss_pred EEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-
Confidence 999999995 6787777654 2568999999999999999999999999999999999999999999999999862110
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
T Consensus 173 -------------------------------------------------------------------------------- 172 (313)
T cd06633 173 -------------------------------------------------------------------------------- 172 (313)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccCCCCccCcchhc---CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 324 ARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
......|+..|+|||++. +..++.++|||||||++|||++|..||...+.......+..... +......
T Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~----- 244 (313)
T cd06633 173 -PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLQSNE----- 244 (313)
T ss_pred -CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCCccc-----
Confidence 011236889999999984 34578899999999999999999999988776665555544321 1111111
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
....+++||.+||+.+|++||++. +++.||||+..+
T Consensus 245 ~~~~l~~li~~~l~~~P~~Rp~~~----~~l~~~~~~~~~ 280 (313)
T cd06633 245 WTDSFRGFVDYCLQKIPQERPASA----ELLRHDFVRRDR 280 (313)
T ss_pred cCHHHHHHHHHHccCChhhCcCHH----HHhcCcccCCCc
Confidence 112488999999999999999987 999999998744
No 295
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.9e-41 Score=333.33 Aligned_cols=275 Identities=26% Similarity=0.324 Sum_probs=203.9
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec--
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA-- 160 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-- 160 (489)
.++|++.+.||+|+||.||+|+++. +++.||||++....... .....+.+|+.+++.++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIK-----TGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERP 80 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECC-----CCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheeccc
Confidence 5899999999999999999999876 56789999986543211 112244569999999999999999998743
Q ss_pred ------CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcc
Q 011302 161 ------SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSD 234 (489)
Q Consensus 161 ------~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~D 234 (489)
...+|+||||+. ++|...+... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus 81 ~~~~~~~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~d 158 (311)
T cd07866 81 DKSKRKRGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIAD 158 (311)
T ss_pred ccccccCceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECc
Confidence 335799999995 5777766543 35799999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCC
Q 011302 235 FDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDD 314 (489)
Q Consensus 235 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (489)
||+++...........
T Consensus 159 fg~~~~~~~~~~~~~~---------------------------------------------------------------- 174 (311)
T cd07866 159 FGLARPYDGPPPNPKG---------------------------------------------------------------- 174 (311)
T ss_pred CccchhccCCCccccc----------------------------------------------------------------
Confidence 9998433211000000
Q ss_pred ccccccccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC-----C
Q 011302 315 PEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT-----F 388 (489)
Q Consensus 315 ~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-----~ 388 (489)
. ............|++.|+|||.+.+. .++.++|||||||++|||++|.+||.+.+.......+...... +
T Consensus 175 ~---~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (311)
T cd07866 175 G---GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETW 251 (311)
T ss_pred C---CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence 0 00001122345789999999998764 4789999999999999999999999988776655554321000 0
Q ss_pred C------CCC-----CCCch----h-HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 389 P------RIG-----VSSSK----E-FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 389 p------~~~-----~~~~~----~-~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+ ... ..... . ......+.+||.+||..||++||++. +++.||||
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~----ell~~~~f 311 (311)
T cd07866 252 PGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTAS----DALEHPYF 311 (311)
T ss_pred hhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHH----HHhcCCCC
Confidence 0 000 00000 0 01123578999999999999999987 99999998
No 296
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.4e-41 Score=338.16 Aligned_cols=262 Identities=28% Similarity=0.384 Sum_probs=207.8
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|.+.+.||+|+||.||+|++.. +++.||||++...... ......+.+|+.+++.++||||+++++++...+
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~-----~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTK-----TGRKVAIKKLSRPFQS-AIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS 87 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECC-----CCcEEEEEecccccch-hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence 4689999999999999999999986 5678999998654222 223355667999999999999999999887665
Q ss_pred e------EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 163 Y------SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 163 ~------~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
. +|+|+||+ |++|.+++.. ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||
T Consensus 88 ~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 88 SLEDFQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccccccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccc
Confidence 4 89999999 7899998865 469999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
++.....
T Consensus 164 ~~~~~~~------------------------------------------------------------------------- 170 (343)
T cd07851 164 LARHTDD------------------------------------------------------------------------- 170 (343)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 9732210
Q ss_pred ccccccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCC------
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP------ 389 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p------ 389 (489)
......+|..|+|||.+.+. .++.++|||||||++|||++|+.||.+.+..+.+..+.......+
T Consensus 171 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 171 --------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred --------cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence 01223578899999998764 578999999999999999999999988877666555543211000
Q ss_pred --------------CCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 390 --------------RIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 390 --------------~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
......... ......+.+||.+||..||++||++. +|++||||+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~----ell~h~~~~~~ 304 (343)
T cd07851 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAA----EALAHPYLAEY 304 (343)
T ss_pred ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHH----HHhcCCCcccc
Confidence 000000000 01134689999999999999999987 99999999864
No 297
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.8e-41 Score=322.12 Aligned_cols=244 Identities=23% Similarity=0.323 Sum_probs=197.8
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee-
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF- 158 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~- 158 (489)
.+...+|++.+.||+|+||.||+|...+ ..||+|.+..+. ....+.+|+.+++.++|+||+++++++
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~-------~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 69 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIV 69 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEEcC-------CcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEE
Confidence 3456789999999999999999997653 568999986542 234567799999999999999999975
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
..++..|+||||+++++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 70 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~ 149 (256)
T cd05082 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLT 149 (256)
T ss_pred cCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccc
Confidence 45678999999999999999988765556889999999999999999999999999999999999999999999999987
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
.....
T Consensus 150 ~~~~~--------------------------------------------------------------------------- 154 (256)
T cd05082 150 KEASS--------------------------------------------------------------------------- 154 (256)
T ss_pred eeccc---------------------------------------------------------------------------
Confidence 32110
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCch
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
......++..|+|||++.+..++.++|||||||++|||++ |+.||...+..+....+..+.. .. .....
T Consensus 155 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~-- 224 (256)
T cd05082 155 ------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-MD-APDGC-- 224 (256)
T ss_pred ------cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-CC-CCCCC--
Confidence 0011234567999999998889999999999999999997 9999988776666655544311 11 11111
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..+.+||.+||..+|++||++.
T Consensus 225 ----~~~~~~li~~~l~~~p~~Rpt~~ 247 (256)
T cd05082 225 ----PPVVYDVMKQCWHLDAATRPSFL 247 (256)
T ss_pred ----CHHHHHHHHHHhcCChhhCcCHH
Confidence 23589999999999999999987
No 298
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.8e-41 Score=325.54 Aligned_cols=255 Identities=20% Similarity=0.254 Sum_probs=198.6
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|++++.||+|+||+||+|++...... ....||+|++...... .....+..|+.+++.++||||+++++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~-~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGEN-VKIPVAIKVLRENTSP--KANKEILDEAYVMAGVGSPYVCRLLGICLT 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCc-cceEEEEEEecCCCCH--HHHHHHHHHHHHHHhcCCCCCceEEEEEcC
Confidence 3457899999999999999999997653221 2345899998643222 223456779999999999999999998875
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
...+++|||+++|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceee
Confidence 45789999999999999887642 5689999999999999999999999999999999999999999999999999854
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+......
T Consensus 159 ~~~~~~~------------------------------------------------------------------------- 165 (279)
T cd05109 159 LDIDETE------------------------------------------------------------------------- 165 (279)
T ss_pred cccccce-------------------------------------------------------------------------
Confidence 3210000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.......+++.|+|||.+.+..++.++|||||||++|||++ |..||...........+.... ..+.. ...
T Consensus 166 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~-~~~---- 236 (279)
T cd05109 166 ---YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE-RLPQP-PIC---- 236 (279)
T ss_pred ---eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-cCCCC-ccC----
Confidence 00011135678999999999889999999999999999998 999998776655544443322 22211 111
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
...+.++|.+||..||++||++.
T Consensus 237 --~~~~~~li~~~l~~dp~~Rp~~~ 259 (279)
T cd05109 237 --TIDVYMIMVKCWMIDSECRPRFR 259 (279)
T ss_pred --CHHHHHHHHHHcCCChhhCcCHH
Confidence 12488999999999999999997
No 299
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=7.5e-41 Score=328.28 Aligned_cols=258 Identities=22% Similarity=0.289 Sum_probs=203.8
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCC-----------CCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVG-----------LPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF 150 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~-----------~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 150 (489)
..++|++++.||+|+||.||+|.+...... .....||+|.+...... .....+.+|+.+++.++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcCCCC
Confidence 346899999999999999999987653211 13467899998765322 33456778999999999999
Q ss_pred cccccceeecCceEEEEEeecCCCchHHHHHhCC---------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCC
Q 011302 151 LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQP---------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPEN 221 (489)
Q Consensus 151 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~N 221 (489)
|+++++++..++..++||||+++++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999987653 1268999999999999999999999999999999999
Q ss_pred eEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 011302 222 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 301 (489)
Q Consensus 222 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
||++.++.++|+|||+++......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~-------------------------------------------------------- 184 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSD-------------------------------------------------------- 184 (296)
T ss_pred eeecCCCceEEccccceeecccCc--------------------------------------------------------
Confidence 999999999999999974321100
Q ss_pred cCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh--CCCCCCCCCcHHHHH
Q 011302 302 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY--GTTPFKGENNEKTLI 379 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~~~~~~~~ 379 (489)
.........+++.|+|||.+.+..++.++|||||||++|||++ |..||...+..+.+.
T Consensus 185 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05051 185 --------------------YYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIE 244 (296)
T ss_pred --------------------ceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHH
Confidence 0001123356789999999998889999999999999999998 788998877666655
Q ss_pred HHhcC------CCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 380 NILKK------PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 380 ~i~~~------~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+... ....+.. . ..+.++.+||.+||+.||++||++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~-~------~~~~~l~~li~~cl~~~p~~Rpt~~ 288 (296)
T cd05051 245 NAGHFFRDDGRQIYLPRP-P------NCPKDIYELMLECWRRDEEDRPTFR 288 (296)
T ss_pred HHHhccccccccccCCCc-c------CCCHHHHHHHHHHhccChhcCCCHH
Confidence 55432 1111110 0 1113589999999999999999997
No 300
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=7.6e-41 Score=322.03 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=205.6
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
|++..++|.+.+.||+|+||.||+|.+.+ .+.||||.+...... ...+.+|+.+++.++||||+++++++
T Consensus 1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~~------~~~~~vK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~ 70 (261)
T cd05034 1 WEIPRESLKLERKLGAGQFGEVWMGTWNG------TTKVAVKTLKPGTMS----PEAFLQEAQIMKKLRHDKLVQLYAVC 70 (261)
T ss_pred CccchhheeeeeeeccCcceEEEEEEEcC------CceEEEEEecCCccC----HHHHHHHHHHHhhCCCCCEeeeeeee
Confidence 34667899999999999999999998764 356899998754332 23566799999999999999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
......|+||||+++++|.+++....+..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++
T Consensus 71 ~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 71 SEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred ecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccc
Confidence 99899999999999999999998765567999999999999999999999999999999999999999999999999997
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+.+....
T Consensus 151 ~~~~~~~------------------------------------------------------------------------- 157 (261)
T cd05034 151 RLIEDDE------------------------------------------------------------------------- 157 (261)
T ss_pred eeccchh-------------------------------------------------------------------------
Confidence 4332100
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCch
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||.+.+....+.++.... ..+.... .
T Consensus 158 ----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~-~-- 229 (261)
T cd05034 158 ----YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY-RMPRPPN-C-- 229 (261)
T ss_pred ----hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCC-C--
Confidence 000011124568999999998889999999999999999998 999999888777777765532 1111111 1
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..+.+++.+||..+|++||++.
T Consensus 230 ----~~~~~~~i~~~l~~~p~~Rp~~~ 252 (261)
T cd05034 230 ----PEELYDLMLQCWDKDPEERPTFE 252 (261)
T ss_pred ----CHHHHHHHHHHcccCcccCCCHH
Confidence 12589999999999999999986
No 301
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=8.4e-41 Score=325.49 Aligned_cols=255 Identities=18% Similarity=0.202 Sum_probs=197.6
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|++++.||+|+||+||+|.+...... ....+++|.+.... ......++..|..+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~ 80 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDS-IKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG 80 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCc-eeeEEEEeeccccc--chHHHHHHHHHHHHHhcCCCCCcceEEEEECC
Confidence 3457899999999999999999998653211 22357888875322 12334566778888999999999999998754
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
...++|+||+++|+|.+++.... ..+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++.
T Consensus 81 -~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 81 -ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred -CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 56789999999999999987643 5689999999999999999999999999999999999999999999999999843
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+.....
T Consensus 159 ~~~~~~-------------------------------------------------------------------------- 164 (279)
T cd05111 159 LYPDDK-------------------------------------------------------------------------- 164 (279)
T ss_pred ccCCCc--------------------------------------------------------------------------
Confidence 211000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
........|+..|+|||.+.+..++.++|||||||++|||++ |..||.+.........+..+.. .+.. ....
T Consensus 165 --~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~--- 237 (279)
T cd05111 165 --KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGER-LAQP-QICT--- 237 (279)
T ss_pred --ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc-CCCC-CCCC---
Confidence 000122357778999999998889999999999999999998 9999988776554444433321 1111 1111
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..+.+++.+||..||++||++.
T Consensus 238 ---~~~~~li~~c~~~~p~~Rps~~ 259 (279)
T cd05111 238 ---IDVYMVMVKCWMIDENVRPTFK 259 (279)
T ss_pred ---HHHHHHHHHHcCCCcccCcCHH
Confidence 2478999999999999999997
No 302
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.7e-41 Score=327.92 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=199.9
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++.+.||+|+||.||+|.............+|+|.+...... ....++..|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS--SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH--HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 47889999999999999999765332223467899988654322 2345677899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCC----------------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCe
Q 011302 165 CLVMEYCPGGDLYAARQRQP----------------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENV 222 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NI 222 (489)
|+||||+.+|+|.+++.... ...+++..+..++.|++.||+|||+++|+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 99999999999999876421 13578888999999999999999999999999999999
Q ss_pred EeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCcccccccccccccccccccccccccccc
Q 011302 223 LVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQV 302 (489)
Q Consensus 223 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (489)
|++.++.+||+|||+++.......
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------------------- 182 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDS-------------------------------------------------------- 182 (290)
T ss_pred EEcCCCcEEeccccccccccCccc--------------------------------------------------------
Confidence 999999999999999843211000
Q ss_pred CCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHH
Q 011302 303 DGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINI 381 (489)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i 381 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+....+
T Consensus 183 --------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 242 (290)
T cd05045 183 --------------------YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLL 242 (290)
T ss_pred --------------------hhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 000112245678999999998889999999999999999998 99999888776655544
Q ss_pred hcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 382 LKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 382 ~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
... ...+... .. ...+.+||.+||+.+|++||++.
T Consensus 243 ~~~-~~~~~~~-~~------~~~~~~~i~~cl~~~P~~Rp~~~ 277 (290)
T cd05045 243 KTG-YRMERPE-NC------SEEMYNLMLTCWKQEPDKRPTFA 277 (290)
T ss_pred hCC-CCCCCCC-CC------CHHHHHHHHHHccCCcccCCCHH
Confidence 432 2222111 11 12588999999999999999987
No 303
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7e-41 Score=320.68 Aligned_cols=242 Identities=23% Similarity=0.313 Sum_probs=192.3
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||.||+|.++. +++.||+|.+..... ......+.+|+.+++.++||||+++++++......|+|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~-----~~~~~a~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 73 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRA-----DNTPVAVKSCRETLP--PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 73 (252)
T ss_pred CccCcccCccEEEEEEec-----CCceEEEEecCccCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEe
Confidence 368999999999999876 467899998764321 1233567779999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
|+++++|.+++... +..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....... .
T Consensus 74 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~--~- 149 (252)
T cd05084 74 LVQGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGV--Y- 149 (252)
T ss_pred eccCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccccc--c-
Confidence 99999999988654 2468999999999999999999999999999999999999999999999999973211000 0
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
.......
T Consensus 150 -------------------------------------------------------------------------~~~~~~~ 156 (252)
T cd05084 150 -------------------------------------------------------------------------ASTGGMK 156 (252)
T ss_pred -------------------------------------------------------------------------cccCCCC
Confidence 0000011
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCC-CCCCCCCCCCchhHHHHhhHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKP-LTFPRIGVSSSKEFEEVVKLQD 407 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~l~~ 407 (489)
.++..|+|||.+.+..++.++|||||||++|||++ |..||...........+.... ...+. .. +..+.+
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~ 227 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPE---LC------PDAVYR 227 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcc---cC------CHHHHH
Confidence 23457999999998889999999999999999997 999998777665555554321 11111 11 125899
Q ss_pred HHHHHhhcCcccccCCC
Q 011302 408 LISKLLVKNPKKRIGSL 424 (489)
Q Consensus 408 li~~~L~~dP~~R~~~~ 424 (489)
|+.+||+.+|++||++.
T Consensus 228 li~~~l~~~p~~Rps~~ 244 (252)
T cd05084 228 LMERCWEYDPGQRPSFS 244 (252)
T ss_pred HHHHHcCCChhhCcCHH
Confidence 99999999999999997
No 304
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.3e-41 Score=337.30 Aligned_cols=267 Identities=28% Similarity=0.399 Sum_probs=205.3
Q ss_pred cCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccce
Q 011302 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (489)
Q Consensus 78 ~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 157 (489)
.|++. ++|.+.+.||+|+||.||+|++.. ++..||||++.+.... ......+.+|+.+++.++||||++++++
T Consensus 10 ~~~~~-~~y~~~~~ig~g~~g~v~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~ 82 (342)
T cd07879 10 VWELP-ERYTSLKQVGSGAYGSVCSAIDKR-----TGEKVAIKKLSRPFQS-EIFAKRAYRELTLLKHMQHENVIGLLDV 82 (342)
T ss_pred hhccc-cceEEEEEeeecCCeEEEEEEeCC-----CCcEEEEEEecCcccc-ccchhHHHHHHHHHHhcCCCCccchhhe
Confidence 34443 689999999999999999999876 5678999998753211 1223456779999999999999999999
Q ss_pred eecC------ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEE
Q 011302 158 FEAS------HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIM 231 (489)
Q Consensus 158 ~~~~------~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vk 231 (489)
+... ..+|+||||+. .+|..++. ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+|
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~k 157 (342)
T cd07879 83 FTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELK 157 (342)
T ss_pred ecccccCCCCceEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 8754 35699999994 57766542 3589999999999999999999999999999999999999999999
Q ss_pred EcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccc
Q 011302 232 LSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQEL 311 (489)
Q Consensus 232 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (489)
|+|||+++....
T Consensus 158 L~dfg~~~~~~~-------------------------------------------------------------------- 169 (342)
T cd07879 158 ILDFGLARHADA-------------------------------------------------------------------- 169 (342)
T ss_pred EeeCCCCcCCCC--------------------------------------------------------------------
Confidence 999999732110
Q ss_pred cCCccccccccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC-C--
Q 011302 312 LDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL-T-- 387 (489)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~-- 387 (489)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+....+..+..... .
T Consensus 170 -------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 170 -------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGP 236 (342)
T ss_pred -------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 0112357889999999876 4578999999999999999999999998776555544433100 0
Q ss_pred -----------------CCCCCCCCc-hhH-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCc
Q 011302 388 -----------------FPRIGVSSS-KEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 441 (489)
Q Consensus 388 -----------------~p~~~~~~~-~~~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~ 441 (489)
.+....... ..+ .....+.+||.+||+.||++||++. +++.||||+.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~----e~l~h~~f~~~~~ 305 (342)
T cd07879 237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTAT----EALEHPYFDSFRD 305 (342)
T ss_pred HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHH----HHhcCcchhhccc
Confidence 000000000 000 1123588999999999999999987 9999999998765
No 305
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=9.3e-41 Score=331.34 Aligned_cols=255 Identities=26% Similarity=0.353 Sum_probs=207.9
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
..|...+.||+|+||.||+|++.. .+..||+|.+.............+..|+.+++.++||||+++++++.++..
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~-----~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 99 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVR-----TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHT 99 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcC-----CCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCe
Confidence 458889999999999999999876 467899999875433333445567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||+. |+|.+++... ...+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 100 ~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~- 176 (317)
T cd06635 100 AWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS- 176 (317)
T ss_pred EEEEEeCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC-
Confidence 999999996 5787776543 3568999999999999999999999999999999999999999999999999863211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
T Consensus 177 -------------------------------------------------------------------------------- 176 (317)
T cd06635 177 -------------------------------------------------------------------------------- 176 (317)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccCCCCccCcchhc---CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 324 ARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
......|++.|+|||.+. ...++.++|||||||++|||++|..||...+.......+............
T Consensus 177 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 248 (317)
T cd06635 177 -PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNE------- 248 (317)
T ss_pred -CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCcc-------
Confidence 011235888999999984 345788999999999999999999999887766666666554322111111
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
....+++||.+||..+|.+||++. ++++|+|+..
T Consensus 249 ~~~~l~~li~~~l~~~p~~Rpt~~----~il~~~~~~~ 282 (317)
T cd06635 249 WSDYFRNFVDSCLQKIPQDRPTSE----ELLKHMFVLR 282 (317)
T ss_pred ccHHHHHHHHHHccCCcccCcCHH----HHHhChhhhc
Confidence 112489999999999999999987 9999999955
No 306
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=9.8e-41 Score=322.69 Aligned_cols=254 Identities=23% Similarity=0.282 Sum_probs=202.6
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|++.+.||+|+||.||+|+++.... ....+|+|.++..... .....+..|+.+++.++||||+++++++..++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 78 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGK--REIPVAIKTLKAGYTE--KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK 78 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCC--CceEEEEEECCCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 4689999999999999999999864311 3457899998653221 23456777999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||++|++|.+++.... ..+++.++..++.|++.||+|||++|++||||||+|||++.++.++|+|||++..+.
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999999999987653 568999999999999999999999999999999999999999999999999974322
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
.....
T Consensus 158 ~~~~~--------------------------------------------------------------------------- 162 (267)
T cd05066 158 DDPEA--------------------------------------------------------------------------- 162 (267)
T ss_pred cccce---------------------------------------------------------------------------
Confidence 10000
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
........++..|+|||.+.+..++.++|+|||||++||+++ |..||.+.+..+....+... ...|.... .
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~-------~ 234 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-YRLPAPMD-------C 234 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-CcCCCCCC-------C
Confidence 000011234568999999998889999999999999999886 99999888776666666544 22232211 1
Q ss_pred HhhHHHHHHHHhhcCcccccCCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..+.+|+.+||+.+|++||++.
T Consensus 235 ~~~~~~li~~~l~~~p~~Rp~~~ 257 (267)
T cd05066 235 PAALHQLMLDCWQKDRNERPKFE 257 (267)
T ss_pred CHHHHHHHHHHcccCchhCCCHH
Confidence 12488999999999999999987
No 307
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=7.7e-41 Score=328.75 Aligned_cols=249 Identities=21% Similarity=0.285 Sum_probs=197.6
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeecCc
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASH 162 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 162 (489)
++|++.+.||+|+||.||+|..+... ....+++|.++.... ......+..|+.++.++ +||||+++++++....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~---~~~~~~ik~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDG---LKMNAAIKMLKEFAS--ENDHRDFAGELEVLCKLGHHPNIINLLGACENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCC---CcceeEEEEccccCC--HHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC
Confidence 68999999999999999999987632 123468887763211 12345577799999998 7999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCC--------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC
Q 011302 163 YSCLVMEYCPGGDLYAARQRQP--------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG 228 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~ 228 (489)
..|+||||+++|+|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENL 156 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCC
Confidence 9999999999999999986532 13588899999999999999999999999999999999999999
Q ss_pred cEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCC
Q 011302 229 HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHD 308 (489)
Q Consensus 229 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (489)
.+||+|||++......
T Consensus 157 ~~kl~dfg~~~~~~~~---------------------------------------------------------------- 172 (297)
T cd05089 157 ASKIADFGLSRGEEVY---------------------------------------------------------------- 172 (297)
T ss_pred eEEECCcCCCccccce----------------------------------------------------------------
Confidence 9999999987321000
Q ss_pred ccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCC
Q 011302 309 QELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLT 387 (489)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~ 387 (489)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+..+..
T Consensus 173 ---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~- 236 (297)
T cd05089 173 ---------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR- 236 (297)
T ss_pred ---------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC-
Confidence 00001123457999999999889999999999999999997 9999999888777777655421
Q ss_pred CCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 388 FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 388 ~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+.. ... ...+.+||.+||..+|.+||++.
T Consensus 237 ~~~~-~~~------~~~~~~li~~~l~~~p~~Rp~~~ 266 (297)
T cd05089 237 MEKP-RNC------DDEVYELMRQCWRDRPYERPPFA 266 (297)
T ss_pred CCCC-CCC------CHHHHHHHHHHcCCChhhCcCHH
Confidence 1111 111 12488999999999999999997
No 308
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=6e-41 Score=328.78 Aligned_cols=251 Identities=27% Similarity=0.442 Sum_probs=204.0
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEE
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
...||+|+||.||+|..+. +++.||||.+..... .....+.+|+.+++.++|+||+++++++..++..|+||
T Consensus 25 ~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 96 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKS-----SGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 96 (292)
T ss_pred HHHcCCCCCeEEEEEEEcC-----CCeEEEEEEecccch---hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEE
Confidence 4579999999999999876 578999998854321 23345777999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||+++++|.+++.. ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~---- 169 (292)
T cd06657 97 EFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE---- 169 (292)
T ss_pred ecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc----
Confidence 99999999987754 45899999999999999999999999999999999999999999999999986321100
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
......
T Consensus 170 --------------------------------------------------------------------------~~~~~~ 175 (292)
T cd06657 170 --------------------------------------------------------------------------VPRRKS 175 (292)
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 000122
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC-CCCCCCCCCchhHHHHhhHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL-TFPRIGVSSSKEFEEVVKLQD 407 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~~~l~~ 407 (489)
..|++.|+|||.+.+..++.++|+|||||++|+|++|..||.+....+....+..... .++.... ....+.+
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~ 248 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHK-------VSPSLKG 248 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCccc-------CCHHHHH
Confidence 4688999999999888889999999999999999999999988776655554433211 1111111 1224889
Q ss_pred HHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 408 LISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 408 li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
+|.+||..||.+||++. +++.||||...
T Consensus 249 li~~~l~~~P~~R~~~~----~ll~~~~~~~~ 276 (292)
T cd06657 249 FLDRLLVRDPAQRATAA----ELLKHPFLAKA 276 (292)
T ss_pred HHHHHHhCCcccCcCHH----HHhcChHHhcc
Confidence 99999999999999997 99999999763
No 309
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.8e-41 Score=336.80 Aligned_cols=268 Identities=24% Similarity=0.312 Sum_probs=211.4
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc--
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH-- 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-- 162 (489)
+|++.+.||.|+||.||+|++.. .+..||||.+..... .......+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKR-----TGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPE 74 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCC-----CCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcc
Confidence 58899999999999999999876 478899999875432 1233456777999999999999999999998775
Q ss_pred ---eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 163 ---YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 163 ---~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
.+|+||||++ ++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.
T Consensus 75 ~~~~~~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 75 DFNDVYIVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred cccceEEEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 8899999996 6898888764 479999999999999999999999999999999999999999999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
........
T Consensus 152 ~~~~~~~~------------------------------------------------------------------------ 159 (330)
T cd07834 152 GVDPDEDE------------------------------------------------------------------------ 159 (330)
T ss_pred eecccccc------------------------------------------------------------------------
Confidence 33210000
Q ss_pred cccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCC-----CC
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRI-----GV 393 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~-----~~ 393 (489)
........||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+..+.......+.. ..
T Consensus 160 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 160 ---KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ---cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 0011234688999999999888 78999999999999999999999999988776666554421111100 00
Q ss_pred CCch------------hH-----HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 394 SSSK------------EF-----EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 394 ~~~~------------~~-----~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.... .+ .....+.+||.+||+++|++||++. +++.||||+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~----~ll~~~~~~~~~ 296 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITAD----EALAHPYLAQLH 296 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHH----HHHhCccHHhhc
Confidence 0000 00 1234588999999999999999987 999999998753
No 310
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.1e-41 Score=334.19 Aligned_cols=266 Identities=19% Similarity=0.264 Sum_probs=207.3
Q ss_pred cCccccCCceeeeeeccCCceeEEEEEEccCCCC--CCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccc
Q 011302 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVG--LPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTL 154 (489)
Q Consensus 78 ~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l 154 (489)
.+++...+|++.+.||+|+||.||+|++.+..+. .....||+|++..... ......+..|+.+++++ +||||+++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT--DKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC--HHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 3556667899999999999999999987542221 2335789998875321 13345677899999999 79999999
Q ss_pred cceeecCceEEEEEeecCCCchHHHHHhCC--------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCC
Q 011302 155 YAEFEASHYSCLVMEYCPGGDLYAARQRQP--------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPE 220 (489)
Q Consensus 155 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~ 220 (489)
++++...+.+|+||||+++|+|.+++.... ...+++..+..++.||+.||+|||++||+||||||+
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 999999999999999999999999987532 234778888999999999999999999999999999
Q ss_pred CeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 011302 221 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 300 (489)
Q Consensus 221 NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (489)
|||++.++.+||+|||+++.......
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------------ 189 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDY------------------------------------------------------ 189 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccc------------------------------------------------------
Confidence 99999999999999999843211000
Q ss_pred ccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHH
Q 011302 301 QVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLI 379 (489)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~ 379 (489)
........++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+.+.
T Consensus 190 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 247 (334)
T cd05100 190 ----------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 247 (334)
T ss_pred ----------------------cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 000111234567999999999999999999999999999998 899999888777666
Q ss_pred HHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 380 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 380 ~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
.+..... .+.. ... ..++.+||.+||+.+|++||++. +++.+
T Consensus 248 ~~~~~~~-~~~~-~~~------~~~l~~li~~cl~~~p~~Rps~~----ell~~ 289 (334)
T cd05100 248 LLKEGHR-MDKP-ANC------THELYMIMRECWHAVPSQRPTFK----QLVED 289 (334)
T ss_pred HHHcCCC-CCCC-CCC------CHHHHHHHHHHcccChhhCcCHH----HHHHH
Confidence 6654321 1111 111 12488999999999999999987 55554
No 311
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-40 Score=320.58 Aligned_cols=244 Identities=22% Similarity=0.260 Sum_probs=193.6
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEee
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEY 170 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 170 (489)
.||+|+||.||+|.++.. .++..||+|+++..... ......+..|+.+++.++||||+++++++. .+..++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~---~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMK---KSEKTVAVKILKNDNND-PALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecC---CCceEEEEEEccCCCCc-HHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEec
Confidence 589999999999987542 14678999998654322 234456778999999999999999999876 4567999999
Q ss_pred cCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCC
Q 011302 171 CPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRP 250 (489)
Q Consensus 171 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 250 (489)
+++|+|.+++... ..+++..+..++.|++.||+|||++||+||||||.|||++.++.+||+|||++..+......
T Consensus 77 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~--- 151 (257)
T cd05116 77 AELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY--- 151 (257)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe---
Confidence 9999999998764 56899999999999999999999999999999999999999999999999998432110000
Q ss_pred cchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccc
Q 011302 251 KLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFV 330 (489)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (489)
........
T Consensus 152 ------------------------------------------------------------------------~~~~~~~~ 159 (257)
T cd05116 152 ------------------------------------------------------------------------YKAKTHGK 159 (257)
T ss_pred ------------------------------------------------------------------------eeecCCCC
Confidence 00001123
Q ss_pred CCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHH
Q 011302 331 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLI 409 (489)
Q Consensus 331 Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li 409 (489)
+++.|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+..+.. .+ ..... +.++.+||
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~~-~~~~~------~~~l~~li 231 (257)
T cd05116 160 WPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-ME-CPQRC------PPEMYDLM 231 (257)
T ss_pred CCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-CC-CCCCC------CHHHHHHH
Confidence 5678999999988889999999999999999998 9999998877777666655432 11 11111 12589999
Q ss_pred HHHhhcCcccccCCC
Q 011302 410 SKLLVKNPKKRIGSL 424 (489)
Q Consensus 410 ~~~L~~dP~~R~~~~ 424 (489)
.+||+.||++||++.
T Consensus 232 ~~~~~~~p~~Rp~~~ 246 (257)
T cd05116 232 KLCWTYGVDERPGFA 246 (257)
T ss_pred HHHhccCchhCcCHH
Confidence 999999999999996
No 312
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.6e-40 Score=318.89 Aligned_cols=243 Identities=23% Similarity=0.297 Sum_probs=201.9
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|++.+.||+|+||.||+|... ++.||+|.+..... ...++..|+.+++.++|+||+++++++.+
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~-------~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 71 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR-------GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQ 71 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec-------CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcC
Confidence 45678999999999999999999865 36789999976643 34567779999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
....|+||||+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.
T Consensus 72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~ 151 (256)
T cd05039 72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKE 151 (256)
T ss_pred CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccc
Confidence 99999999999999999999876545799999999999999999999999999999999999999999999999999743
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
....
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (256)
T cd05039 152 ASQG---------------------------------------------------------------------------- 155 (256)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 2100
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCC-CCCCCCCCCchh
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPL-TFPRIGVSSSKE 398 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~ 398 (489)
.....++..|+|||.+.+..++.++|||||||++|||++ |..||...+..+....+..+.. ..+. .
T Consensus 156 -----~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~---- 223 (256)
T cd05039 156 -----QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPE---G---- 223 (256)
T ss_pred -----cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCcc---C----
Confidence 001124567999999988889999999999999999997 9999988876666555544321 1111 1
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+..+.+||.+||..+|++||++.
T Consensus 224 --~~~~~~~li~~~l~~~p~~Rp~~~ 247 (256)
T cd05039 224 --CPPEVYKVMKDCWELDPAKRPTFK 247 (256)
T ss_pred --CCHHHHHHHHHHhccChhhCcCHH
Confidence 123589999999999999999997
No 313
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=9.1e-41 Score=321.65 Aligned_cols=249 Identities=22% Similarity=0.283 Sum_probs=199.8
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
++..++|.+.+.||+|+||.||+|.+.. ...+|+|.+..... ....+.+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~------~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 71 (260)
T cd05069 2 EIPRESLRLDVKLGQGCFGEVWMGTWNG------TTKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS 71 (260)
T ss_pred cCChHHeeeeeeecCcCCCeEEEEEEcC------CceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 3455789999999999999999998765 23589998865432 1234667999999999999999999875
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
. +..|+||||+++|+|.+++.......+++..+..++.|++.||+|||+.||+||||||+|||++.++.++|+|||+++
T Consensus 72 ~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 72 E-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred C-CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccce
Confidence 4 568999999999999999987655568899999999999999999999999999999999999999999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
......
T Consensus 151 ~~~~~~-------------------------------------------------------------------------- 156 (260)
T cd05069 151 LIEDNE-------------------------------------------------------------------------- 156 (260)
T ss_pred EccCCc--------------------------------------------------------------------------
Confidence 321100
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+....+.... ..+...
T Consensus 157 ---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~------ 226 (260)
T cd05069 157 ---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY-RMPCPQ------ 226 (260)
T ss_pred ---ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCc------
Confidence 000011235678999999998889999999999999999999 999999888777766665532 111111
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..+..+.+||.+||+.||++||++.
T Consensus 227 -~~~~~~~~li~~~l~~~p~~Rp~~~ 251 (260)
T cd05069 227 -GCPESLHELMKLCWKKDPDERPTFE 251 (260)
T ss_pred -ccCHHHHHHHHHHccCCcccCcCHH
Confidence 1123589999999999999999986
No 314
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.9e-40 Score=317.37 Aligned_cols=254 Identities=28% Similarity=0.456 Sum_probs=210.9
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++.+.||+|+||.||+|.+.. .++.|++|.+...... ......+.+|+.++++++||||+++++++.+.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLE-----TGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSL 74 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcC-----CCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEE
Confidence 58899999999999999999876 4678999999766542 23446778899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 75 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 75 YIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred EEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 9999999999999998775 57999999999999999999999999999999999999999999999999998432210
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
. .
T Consensus 153 ~------------------------------------------------------------------------------~ 154 (254)
T cd06627 153 S------------------------------------------------------------------------------K 154 (254)
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 0
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
......|+..|+|||.+.+..++.++||||||+++|+|++|..||...+......++..... +...... ...
T Consensus 155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~ 226 (254)
T cd06627 155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH--PPLPEGI------SPE 226 (254)
T ss_pred cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC--CCCCCCC------CHH
Confidence 01233588899999999888889999999999999999999999987766555555443221 1111111 124
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
+.++|.+||..+|++||++. +++.||||
T Consensus 227 ~~~~i~~~l~~~p~~R~~~~----~~l~~~~~ 254 (254)
T cd06627 227 LKDFLMQCFQKDPNLRPTAK----QLLKHPWI 254 (254)
T ss_pred HHHHHHHHHhCChhhCcCHH----HHhcCCCC
Confidence 89999999999999999987 99999998
No 315
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.6e-40 Score=320.55 Aligned_cols=251 Identities=27% Similarity=0.358 Sum_probs=201.5
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
++|++.+.||+|+||.||+|.+.. +++.||+|.++...........++.+|+.+++.++|+||+++++++...+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLL-----DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcC-----CCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe
Confidence 689999999999999999999885 567899999875433333445667789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
.++||||+++|+|..++... ....+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++..
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~ 156 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeec
Confidence 99999999999999888642 2356899999999999999999999999999999999999999999999999987432
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
...
T Consensus 157 ~~~----------------------------------------------------------------------------- 159 (267)
T cd08224 157 SSK----------------------------------------------------------------------------- 159 (267)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 100
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCc--HHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN--EKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||..... .+....+..+.. +.....
T Consensus 160 -~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~----- 231 (267)
T cd08224 160 -TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY--PPLPAD----- 231 (267)
T ss_pred -CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC--CCCChh-----
Confidence 0001223588899999999998899999999999999999999999965532 233333333221 111110
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.....+.++|.+||..+|++||++.
T Consensus 232 ~~~~~~~~~i~~cl~~~p~~Rp~~~ 256 (267)
T cd08224 232 HYSEELRDLVSRCINPDPEKRPDIS 256 (267)
T ss_pred hcCHHHHHHHHHHcCCCcccCCCHH
Confidence 1123588999999999999999997
No 316
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5.8e-41 Score=336.37 Aligned_cols=266 Identities=23% Similarity=0.309 Sum_probs=202.0
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC--
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS-- 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-- 161 (489)
.+|.+.+.||.|+||.||+|.++. +++.||+|.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~-----~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 76 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSD-----CDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGS 76 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECC-----CCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhccccc
Confidence 689999999999999999999886 578899999865432 2334566799999999999999999877644
Q ss_pred ------------ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEec-cCC
Q 011302 162 ------------HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVR-EDG 228 (489)
Q Consensus 162 ------------~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~-~~~ 228 (489)
...|+||||++ ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++ .++
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~ 152 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCc
Confidence 35899999995 689887754 4689999999999999999999999999999999999998 456
Q ss_pred cEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCC
Q 011302 229 HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHD 308 (489)
Q Consensus 229 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (489)
.+||+|||+++.+...-.
T Consensus 153 ~~kl~dfg~~~~~~~~~~-------------------------------------------------------------- 170 (342)
T cd07854 153 VLKIGDFGLARIVDPHYS-------------------------------------------------------------- 170 (342)
T ss_pred eEEECCcccceecCCccc--------------------------------------------------------------
Confidence 789999999743211000
Q ss_pred ccccCCccccccccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC
Q 011302 309 QELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 387 (489)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 387 (489)
.........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.+..+....+......
T Consensus 171 -------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 171 -------------HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred -------------cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 0000011257889999998765 45788999999999999999999999887765555444332100
Q ss_pred -CC-----------------CCCC-CCchhH--HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 388 -FP-----------------RIGV-SSSKEF--EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 388 -~p-----------------~~~~-~~~~~~--~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.+ .... .....+ ....++.+||.+||..||++||++. +++.||||+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~----ell~h~~~~~~~ 307 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAE----EALMHPYMSCYS 307 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHH----HHhCCCcccccc
Confidence 00 0000 000000 1123588999999999999999987 999999998653
No 317
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.8e-40 Score=325.98 Aligned_cols=262 Identities=24% Similarity=0.343 Sum_probs=203.6
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccce
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAE 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 157 (489)
+.+..++|.+.+.||+|+||+||+|.+.. +++.||||.+.+.... .....+..|..++..+ +||||++++++
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~ 82 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKK-----TGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGY 82 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECC-----CCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhhee
Confidence 34567899999999999999999999886 4688999999754322 2233444566656555 59999999999
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
+.+....|+||||+ +++|..++.... ..+++..+..++.|++.||+|||+ .||+||||+|+||+++.++.+||+|||
T Consensus 83 ~~~~~~~~~v~e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 83 FITDSDVFICMELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred eecCCeEEEEeecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccc
Confidence 99999999999999 567777766533 478999999999999999999997 599999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
++..+...
T Consensus 161 ~~~~~~~~------------------------------------------------------------------------ 168 (296)
T cd06618 161 ISGRLVDS------------------------------------------------------------------------ 168 (296)
T ss_pred cchhccCC------------------------------------------------------------------------
Confidence 87322100
Q ss_pred ccccccccCCccccCCCCccCcchhcCCC----CCCcccHHHHHHHHHHHhhCCCCCCCCCc-HHHHHHHhcCCC-CCCC
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQG----HGSAVDWWTLGVFLYEMLYGTTPFKGENN-EKTLINILKKPL-TFPR 390 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~-~~p~ 390 (489)
.......|++.|+|||.+.+.. ++.++|||||||++|||++|+.||..... .+.+..+..... ..+.
T Consensus 169 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T cd06618 169 -------KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPP 241 (296)
T ss_pred -------CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCC
Confidence 0001124788999999997654 78899999999999999999999976433 344444444321 2221
Q ss_pred CCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 391 IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 391 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
.. .....+.+||.+||..||.+||++. ++++||||+..
T Consensus 242 ~~-------~~~~~l~~li~~~l~~~p~~Rp~~~----~il~~~~~~~~ 279 (296)
T cd06618 242 NE-------GFSPDFCSFVDLCLTKDHRKRPKYR----ELLQHPFIRRY 279 (296)
T ss_pred CC-------CCCHHHHHHHHHHccCChhhCCCHH----HHhcChhhhcc
Confidence 11 0122589999999999999999997 99999999753
No 318
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.2e-40 Score=319.01 Aligned_cols=250 Identities=18% Similarity=0.297 Sum_probs=202.2
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
|++..++|++.+.||+|+||.||+|.+.. ...+|+|.+..... ....+.+|+.+++.++|+||+++++++
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~------~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~ 70 (260)
T cd05073 1 WEIPRESLKLEKKLGAGQFGEVWMATYNK------HTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVV 70 (260)
T ss_pred CcccccceeEEeEecCccceEEEEEEecC------CccEEEEecCCChh----HHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence 34667899999999999999999998654 34589998875432 234567799999999999999999998
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
.. ...|+||||+++|+|.+++....+..+++..+..++.||+.||.|||+.|++||||||+||+++.++.+||+|||++
T Consensus 71 ~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 71 TK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred cC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcce
Confidence 87 78899999999999999998765667888999999999999999999999999999999999999999999999987
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
..+....
T Consensus 150 ~~~~~~~------------------------------------------------------------------------- 156 (260)
T cd05073 150 RVIEDNE------------------------------------------------------------------------- 156 (260)
T ss_pred eeccCCC-------------------------------------------------------------------------
Confidence 4321100
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCch
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+..+. ..+...
T Consensus 157 ----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~----- 226 (260)
T cd05073 157 ----YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-RMPRPE----- 226 (260)
T ss_pred ----cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-CCCCcc-----
Confidence 000011235677999999998889999999999999999998 999999887776666655432 222111
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
....++.+++.+||+.+|++||++.
T Consensus 227 --~~~~~~~~~i~~~l~~~p~~Rp~~~ 251 (260)
T cd05073 227 --NCPEELYNIMMRCWKNRPEERPTFE 251 (260)
T ss_pred --cCCHHHHHHHHHHcccCcccCcCHH
Confidence 1123589999999999999999986
No 319
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.1e-40 Score=322.95 Aligned_cols=255 Identities=20% Similarity=0.251 Sum_probs=196.2
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec-----
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA----- 160 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----- 160 (489)
|.+.+.||+|+||.||+|++.... ....||+|.++..... ......+..|..+++.++||||+++++++..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~---~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 76 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDD---SILKVAVKTMKIAICT-RSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESE 76 (272)
T ss_pred CccccccCcccCceEEEeEEccCC---CeeeEEEEecccCcCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCccc
Confidence 356789999999999999987631 1246899988654221 2335567789999999999999999997642
Q ss_pred -CceEEEEEeecCCCchHHHHHhC----CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 161 -SHYSCLVMEYCPGGDLYAARQRQ----PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 161 -~~~~~lV~E~~~gg~L~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
....++||||+++|+|.+++... ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus 77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCC
Confidence 23578999999999998876432 1245889999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+++.+.....
T Consensus 157 g~~~~~~~~~~--------------------------------------------------------------------- 167 (272)
T cd05075 157 GLSKKIYNGDY--------------------------------------------------------------------- 167 (272)
T ss_pred CcccccCcccc---------------------------------------------------------------------
Confidence 99843211000
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 394 (489)
........+++.|+|||.+.+..++.++|||||||++|||++ |+.||.+....+....+..+... +... .
T Consensus 168 -------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~-~ 238 (272)
T cd05075 168 -------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL-KQPP-D 238 (272)
T ss_pred -------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC-CCCC-C
Confidence 000111246678999999999989999999999999999999 89999888777666666554321 1111 1
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
. ...+.+||.+||+.||++||++. +|++
T Consensus 239 ~------~~~~~~li~~~l~~~p~~Rps~~----~l~~ 266 (272)
T cd05075 239 C------LDGLYSLMSSCWLLNPKDRPSFE----TLRC 266 (272)
T ss_pred C------CHHHHHHHHHHcCCCcccCcCHH----HHHH
Confidence 1 12489999999999999999987 5554
No 320
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-42 Score=343.20 Aligned_cols=244 Identities=32% Similarity=0.489 Sum_probs=200.6
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHh-CCCCCcccccceeec
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM-LDHPFLPTLYAEFEA 160 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~ 160 (489)
..+.|.+...+|.|+|+.|-.+.+.. +.+.+++|++.+.. .....|+.++.. -+||||+++++++.+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~-----t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~ 387 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSP-----TDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYED 387 (612)
T ss_pred cchhhccccccCCCCccceeeeeccc-----cccchhheeccccc-------cccccccchhhhhcCCCcceeecceecC
Confidence 45789999999999999999999887 56788999998662 122236655444 479999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEe-ccCCcEEEcccCCCc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLV-REDGHIMLSDFDLSF 239 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl-~~~~~vkl~DFG~a~ 239 (489)
+.+.|+|||++.|+.|.+.+... ..+. .++..|++||+.||.|||++|||||||||+|||+ +..|+++|+|||.++
T Consensus 388 ~~~~~~v~e~l~g~ell~ri~~~--~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~ 464 (612)
T KOG0603|consen 388 GKEIYLVMELLDGGELLRRIRSK--PEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWS 464 (612)
T ss_pred CceeeeeehhccccHHHHHHHhc--chhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhh
Confidence 99999999999999998877665 2233 7888899999999999999999999999999999 699999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
..+.
T Consensus 465 ~~~~---------------------------------------------------------------------------- 468 (612)
T KOG0603|consen 465 ELER---------------------------------------------------------------------------- 468 (612)
T ss_pred hCch----------------------------------------------------------------------------
Confidence 3321
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH-HHHHHHhcCCCCCCCCCCCCchh
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE-KTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
...+-|-|..|.|||++....|+.++||||||++||+||+|+.||...... ++..+|..+... .+
T Consensus 469 -----~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s----~~----- 534 (612)
T KOG0603|consen 469 -----SCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS----EC----- 534 (612)
T ss_pred -----hhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc----cc-----
Confidence 012235688999999999999999999999999999999999999876665 444444443322 11
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.+..++|||++||+.||.+|+++. +++.||||
T Consensus 535 --vS~~AKdLl~~LL~~dP~~Rl~~~----~i~~h~w~ 566 (612)
T KOG0603|consen 535 --VSDEAKDLLQQLLQVDPALRLGAD----EIGAHPWF 566 (612)
T ss_pred --cCHHHHHHHHHhccCChhhCcChh----hhccCcch
Confidence 122599999999999999999998 99999999
No 321
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.3e-40 Score=315.93 Aligned_cols=257 Identities=30% Similarity=0.445 Sum_probs=209.0
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC--c
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--H 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~ 162 (489)
+|++.+.||+|+||.||+|.+.. ++..|++|++...... ......+.+|+.++++++||||+++++.+... .
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKD-----TGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECC-----CCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCC
Confidence 47889999999999999999886 5678999998765432 34456778899999999999999999999988 8
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 999999999999999998876 379999999999999999999999999999999999999999999999999974332
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
.....
T Consensus 153 ~~~~~--------------------------------------------------------------------------- 157 (260)
T cd06606 153 DIETG--------------------------------------------------------------------------- 157 (260)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 10000
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCc-HHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN-EKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
.......++..|+|||.+.+...+.++|||||||++|+|++|..||...+. ......+.... ..+......
T Consensus 158 -~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~------ 229 (260)
T cd06606 158 -EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSG-EPPEIPEHL------ 229 (260)
T ss_pred -ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccC-CCcCCCccc------
Confidence 001223688899999999988899999999999999999999999987762 23333333211 111111111
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
...+.+||.+||+.||++||++. ++++||||
T Consensus 230 ~~~l~~~i~~~l~~~p~~Rp~~~----~ll~~~~~ 260 (260)
T cd06606 230 SEEAKDFLRKCLRRDPKKRPTAD----ELLQHPFL 260 (260)
T ss_pred CHHHHHHHHHhCcCChhhCCCHH----HHhhCCCC
Confidence 23589999999999999999997 99999998
No 322
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.5e-40 Score=314.41 Aligned_cols=253 Identities=30% Similarity=0.489 Sum_probs=208.3
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|.+.+.||+|+||.||+|.+.. .++.|++|++..... .....+.+|+.+++.++|+||+++++++......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 72 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKR-----TGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDEL 72 (253)
T ss_pred CceeeeeeccCCceEEEEEEECC-----CCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE
Confidence 58889999999999999999886 467899999976543 2345677799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+|+||++|++|.+++.... ..+++..+..++.|++.||.|||.+|++||||+|+||+++.++.++|+|||++......
T Consensus 73 ~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 73 WIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred EEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence 99999999999999887653 57899999999999999999999999999999999999999999999999987332110
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
.
T Consensus 152 ~------------------------------------------------------------------------------- 152 (253)
T cd05122 152 K------------------------------------------------------------------------------- 152 (253)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
......|+..|+|||.+.+..++.++|||||||++|+|++|..||...+.......+.... .+...... .....
T Consensus 153 ~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~ 226 (253)
T cd05122 153 ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG--PPGLRNPE----KWSDE 226 (253)
T ss_pred cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcC--CCCcCccc----ccCHH
Confidence 0123468889999999998888999999999999999999999998876555444443321 11111111 00125
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHcCCC
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 435 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~ 435 (489)
+.++|.+||..||++||++. ++++|||
T Consensus 227 ~~~~i~~~l~~~p~~R~t~~----~~l~~~~ 253 (253)
T cd05122 227 FKDFLKKCLQKNPEKRPTAE----QLLKHPF 253 (253)
T ss_pred HHHHHHHHccCChhhCCCHH----HHhcCCC
Confidence 89999999999999999997 9999998
No 323
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.3e-40 Score=320.06 Aligned_cols=256 Identities=20% Similarity=0.250 Sum_probs=203.5
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|+..+.||+|+||.||+|++..... ....+|+|.+...... .....+..|+.+++.++||||+++++++.+
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~--~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 77 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGR--KEVAVAIKTLKPGYTE--KQRQDFLSEASIMGQFSHHNIIRLEGVVTK 77 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCC--CceEEEEEeccccCCH--HHHHHHHHHHHHHhcCCCCCeeEEEEEEcc
Confidence 345689999999999999999999875321 3457999998654221 223456779999999999999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
.+..|+||||+++++|.+++.... ..+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||++..
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCcccee
Confidence 999999999999999999887643 5689999999999999999999999999999999999999999999999999743
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+......
T Consensus 157 ~~~~~~~------------------------------------------------------------------------- 163 (268)
T cd05063 157 LEDDPEG------------------------------------------------------------------------- 163 (268)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 2210000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.........++.|+|||++.+..++.++|||||||++|||++ |..||...+..+....+... ...|.... .
T Consensus 164 --~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~-~---- 235 (268)
T cd05063 164 --TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-FRLPAPMD-C---- 235 (268)
T ss_pred --ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-CCCCCCCC-C----
Confidence 000011123467999999998889999999999999999997 99999888877777766543 22222211 1
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
...+.+|+.+||..+|++||++.
T Consensus 236 --~~~~~~li~~c~~~~p~~Rp~~~ 258 (268)
T cd05063 236 --PSAVYQLMLQCWQQDRARRPRFV 258 (268)
T ss_pred --CHHHHHHHHHHcCCCcccCcCHH
Confidence 12488999999999999999987
No 324
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.5e-40 Score=317.75 Aligned_cols=248 Identities=24% Similarity=0.306 Sum_probs=200.4
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||.||+|.+.... .....||||.+...... .....+..|+.++++++||||+++++.+.+ ...++|||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~--~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e 75 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSG--GKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTE 75 (257)
T ss_pred CcCCccCcccEEeeeEecCC--CCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEE
Confidence 36899999999999987531 23457999999876654 455677889999999999999999999988 89999999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
|+++|+|.+++.......+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||++..+......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-- 153 (257)
T cd05040 76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH-- 153 (257)
T ss_pred ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc--
Confidence 999999999987754356899999999999999999999999999999999999999999999999998433210000
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
.......
T Consensus 154 -------------------------------------------------------------------------~~~~~~~ 160 (257)
T cd05040 154 -------------------------------------------------------------------------YVMEEHL 160 (257)
T ss_pred -------------------------------------------------------------------------eecccCC
Confidence 0001123
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.++..|+|||.+.+..++.++|||||||++|||++ |..||...+..+....+.......+.... .+..+.+|
T Consensus 161 ~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l 233 (257)
T cd05040 161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEA-------CPQDIYNV 233 (257)
T ss_pred CCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCcc-------CCHHHHHH
Confidence 57788999999999889999999999999999998 99999888777766666543222221111 12358999
Q ss_pred HHHHhhcCcccccCCC
Q 011302 409 ISKLLVKNPKKRIGSL 424 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~ 424 (489)
+.+||..+|++||++.
T Consensus 234 i~~~l~~~p~~Rps~~ 249 (257)
T cd05040 234 MLQCWAHNPADRPTFA 249 (257)
T ss_pred HHHHCCCCcccCCCHH
Confidence 9999999999999987
No 325
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.4e-40 Score=317.64 Aligned_cols=252 Identities=25% Similarity=0.333 Sum_probs=205.1
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||.||+|.+.... ..+..|++|++....... ....+..|+.+++.++|+||+++++++.+...+|+|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~--~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 76 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKD--GKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLE 76 (262)
T ss_pred CccccCCceEEEEEEEecCC--CCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEE
Confidence 46899999999999988621 136789999998664432 45667789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCC-------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 170 YCPGGDLYAARQRQP-------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
|+++++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||.+....
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence 999999999987642 3679999999999999999999999999999999999999999999999999984332
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
....
T Consensus 157 ~~~~---------------------------------------------------------------------------- 160 (262)
T cd00192 157 DDDY---------------------------------------------------------------------------- 160 (262)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 1000
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
........+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+....+..+.. .+... ..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~-~~------ 232 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR-LPKPE-YC------ 232 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CCCCc-cC------
Confidence 001123357889999999998889999999999999999998 6999999887777777665321 11111 11
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
+.++.++|.+||..+|.+||++. +++.+
T Consensus 233 ~~~~~~li~~~l~~~p~~Rps~~----~l~~~ 260 (262)
T cd00192 233 PDELYELMLSCWQLDPEDRPTFS----ELVER 260 (262)
T ss_pred ChHHHHHHHHHccCCcccCcCHH----HHHHh
Confidence 22589999999999999999997 77764
No 326
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.7e-40 Score=325.97 Aligned_cols=259 Identities=21% Similarity=0.256 Sum_probs=199.1
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCC---------CCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcc
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMV---------GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLP 152 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~---------~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 152 (489)
..++|++.+.||+|+||.||+|++.+... ......||+|.+..... ......+.+|+.+++.++||||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT--KTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC--HHHHHHHHHHHHHHHhCCCCCcC
Confidence 34689999999999999999998764211 11234689999875421 12344577899999999999999
Q ss_pred cccceeecCceEEEEEeecCCCchHHHHHhCC----------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCe
Q 011302 153 TLYAEFEASHYSCLVMEYCPGGDLYAARQRQP----------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENV 222 (489)
Q Consensus 153 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~----------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NI 222 (489)
++++++...+..|+||||+++++|.+++.... ...+++..+..++.|++.||+|||++|++||||||+||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 99999999999999999999999999886531 12367888899999999999999999999999999999
Q ss_pred EeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCcccccccccccccccccccccccccccc
Q 011302 223 LVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQV 302 (489)
Q Consensus 223 Ll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (489)
|++.++.+||+|||++..+....
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~--------------------------------------------------------- 183 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGD--------------------------------------------------------- 183 (295)
T ss_pred EEcCCCcEEecccccccccccCc---------------------------------------------------------
Confidence 99999999999999974321000
Q ss_pred CCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh--CCCCCCCCCcHHHHHH
Q 011302 303 DGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY--GTTPFKGENNEKTLIN 380 (489)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~~~~~~~~~ 380 (489)
.........++..|+|||++.+..++.++|||||||++|||++ |..||...+..+.+..
T Consensus 184 -------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 244 (295)
T cd05097 184 -------------------YYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN 244 (295)
T ss_pred -------------------ceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence 0001122346778999999998889999999999999999987 7789988776665544
Q ss_pred Hhc-----CCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 381 ILK-----KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 381 i~~-----~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+.. ....+...... .+..+.+||.+||..||++||++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~~p~~RPs~~ 287 (295)
T cd05097 245 TGEFFRNQGRQIYLSQTPL------CPSPVFKLMMRCWSRDIKDRPTFN 287 (295)
T ss_pred HHHhhhhccccccCCCCCC------CCHHHHHHHHHHcCCCchhCcCHH
Confidence 422 11111111111 123589999999999999999996
No 327
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.5e-40 Score=331.92 Aligned_cols=270 Identities=26% Similarity=0.296 Sum_probs=202.0
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceee----
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFE---- 159 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~---- 159 (489)
+|.+.+.||+|+||.||+|++.... .+..||||.+..... .......+..|+.+++++ +||||+++++.+.
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~---~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 76 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETS---EEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPG 76 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCC---cCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccc
Confidence 4889999999999999999987621 267899999864321 122344566799999998 5999999998653
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
....+|++|||+ +++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 77 ~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 77 NFNELYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred cCCcEEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 235689999999 57898888654 579999999999999999999999999999999999999999999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.+......
T Consensus 154 ~~~~~~~~------------------------------------------------------------------------ 161 (332)
T cd07857 154 GFSENPGE------------------------------------------------------------------------ 161 (332)
T ss_pred eccccccc------------------------------------------------------------------------
Confidence 33210000
Q ss_pred cccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCC---------
Q 011302 320 EPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP--------- 389 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p--------- 389 (489)
.........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+....+..+.......+
T Consensus 162 --~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
T cd07857 162 --NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS 239 (332)
T ss_pred --ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence 0011223578999999998866 4689999999999999999999999988765544443322100000
Q ss_pred -----------CCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 390 -----------RIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 390 -----------~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
......... ......+.+||.+||+.||++||++. +++.||||+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~----~ll~~~~~~~~ 298 (332)
T cd07857 240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVE----EALEHPYLAIW 298 (332)
T ss_pred hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHH----HHhcChhhhhh
Confidence 000000000 01123589999999999999999987 99999999643
No 328
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=9.9e-41 Score=333.65 Aligned_cols=281 Identities=26% Similarity=0.334 Sum_probs=208.0
Q ss_pred CCcee-eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHH-----------HHHHHHHHHHHHHhCCCCCc
Q 011302 84 DHFRL-LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-----------KLHRADMEKVILTMLDHPFL 151 (489)
Q Consensus 84 ~~y~~-~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~hpnI 151 (489)
++|.. .+.||+|+||+||+|.+.. .++.||||.+......... ....+.+|+.+++.++||||
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 82 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTL-----TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI 82 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECC-----CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce
Confidence 46654 5779999999999999876 5688999998754322100 01245679999999999999
Q ss_pred ccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEE
Q 011302 152 PTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIM 231 (489)
Q Consensus 152 v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vk 231 (489)
+++++++..++..|+||||+. |+|.+++... ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+|
T Consensus 83 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 83 MGLVDVYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred eeeeEEEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEE
Confidence 999999999999999999995 6999888764 5689999999999999999999999999999999999999999999
Q ss_pred EcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccc
Q 011302 232 LSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQEL 311 (489)
Q Consensus 232 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (489)
|+|||++.......... ......
T Consensus 160 l~dfg~~~~~~~~~~~~--------------------------------~~~~~~------------------------- 182 (335)
T PTZ00024 160 IADFGLARRYGYPPYSD--------------------------------TLSKDE------------------------- 182 (335)
T ss_pred ECCccceeecccccccc--------------------------------cccccc-------------------------
Confidence 99999984432100000 000000
Q ss_pred cCCccccccccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc---CCC-
Q 011302 312 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---KPL- 386 (489)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~- 386 (489)
............+++.|+|||.+.+.. ++.++|||||||++|||++|.+||.+.+..+.+..+.. .+.
T Consensus 183 -------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~ 255 (335)
T PTZ00024 183 -------TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNE 255 (335)
T ss_pred -------cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCch
Confidence 000001112235788999999997754 68999999999999999999999998887766555432 111
Q ss_pred -CCCCCC---------CCCchhH-----HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 387 -TFPRIG---------VSSSKEF-----EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 387 -~~p~~~---------~~~~~~~-----~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.++... ......+ .....+.+||.+||+.+|++||++. +++.||||++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~----~~l~~~~~~~~~ 320 (335)
T PTZ00024 256 DNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAK----EALKHEYFKSDP 320 (335)
T ss_pred hhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHH----HHhcCcccCCCC
Confidence 011100 0000000 1123588999999999999999987 999999998643
No 329
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.8e-40 Score=315.79 Aligned_cols=254 Identities=30% Similarity=0.418 Sum_probs=210.7
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+|++.+.||+|+||.||+|+++. +++.||+|.+....... .....+..|+.+++.++|+||+++++++.+....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLS-----DNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHPNIISYKEAFLDGNKL 74 (256)
T ss_pred CceEeeeecCCCceeEEEEEECC-----CCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEE
Confidence 58899999999999999999876 56789999998654432 3345667799999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 165 CLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
|+||||+++++|.+++.+. ....+++..+..++.|++.||+|||++|++||||+|.||+++.++.+||+|||+++...
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~ 154 (256)
T cd08530 75 CIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLK 154 (256)
T ss_pred EEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhc
Confidence 9999999999999887652 23568899999999999999999999999999999999999999999999999974321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 155 ~~------------------------------------------------------------------------------ 156 (256)
T cd08530 155 KN------------------------------------------------------------------------------ 156 (256)
T ss_pred cC------------------------------------------------------------------------------
Confidence 10
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~ 402 (489)
......|++.|+|||.+.+..++.++|+||||+++|||++|..||...+..+....+..... +.... ...
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~------~~~ 226 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY--PPIPP------IYS 226 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCch------hhC
Confidence 01112578899999999998899999999999999999999999998887666555554332 21111 112
Q ss_pred hhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.+++++|.+||..+|++||++. ++++||++
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~----~~l~~p~~ 256 (256)
T cd08530 227 QDLQNFIRSMLQVKPKLRPNCD----KILASPAV 256 (256)
T ss_pred HHHHHHHHHHcCCCcccCCCHH----HHhcCCCC
Confidence 3589999999999999999997 99999974
No 330
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.4e-40 Score=320.08 Aligned_cols=256 Identities=29% Similarity=0.496 Sum_probs=201.9
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHH--HHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA--IRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
+|.+.+.||+|+||.||+|++... ...+++|+++..... ......++..|+.+++.++||||+++++++.+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKA-----VAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCC-----CCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC
Confidence 588999999999999999998763 333455555432111 0122334566889999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHh--CCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 163 YSCLVMEYCPGGDLYAARQR--QPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
..|+||||+++++|.+++.. .....+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||++..
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~ 154 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRL 154 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceee
Confidence 99999999999999988764 23357999999999999999999999999999999999999974 6799999998743
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
....
T Consensus 155 ~~~~---------------------------------------------------------------------------- 158 (260)
T cd08222 155 LMGS---------------------------------------------------------------------------- 158 (260)
T ss_pred cCCC----------------------------------------------------------------------------
Confidence 2110
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.+.........+..+.. +.... .
T Consensus 159 --~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~ 228 (260)
T cd08222 159 --CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPT--PSLPE------T 228 (260)
T ss_pred --cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCC--CCCcc------h
Confidence 0011223578899999999888889999999999999999999999988776666666654322 11111 1
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
....+.++|.+||..||++||++. ++++||||
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rp~~~----~il~~~~~ 260 (260)
T cd08222 229 YSRQLNSIMQSMLNKDPSLRPSAA----EILRNPFI 260 (260)
T ss_pred hcHHHHHHHHHHhcCChhhCcCHH----HHhhCCCC
Confidence 123588999999999999999997 99999997
No 331
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.1e-40 Score=317.55 Aligned_cols=244 Identities=23% Similarity=0.261 Sum_probs=192.2
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEee
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEY 170 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 170 (489)
.||+|+||.||+|.++... .+..||+|++..... ......+.+|+.+++.++||||+++++++.. ...|+||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~---~~~~vavk~~~~~~~--~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRK---KQIDVAIKVLKNENE--KSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCC---CceeEEEEEcccccC--hHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEe
Confidence 4899999999999876421 345799999875422 2334567789999999999999999998864 578999999
Q ss_pred cCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCC
Q 011302 171 CPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRP 250 (489)
Q Consensus 171 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~ 250 (489)
+++|+|.+++... ...+++..+..++.||+.||+|||++|++||||||+|||++.++.+||+|||++.........
T Consensus 76 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~--- 151 (257)
T cd05115 76 ASGGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY--- 151 (257)
T ss_pred CCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccc---
Confidence 9999999988754 257899999999999999999999999999999999999999999999999997432110000
Q ss_pred cchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccc
Q 011302 251 KLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFV 330 (489)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (489)
........
T Consensus 152 ------------------------------------------------------------------------~~~~~~~~ 159 (257)
T cd05115 152 ------------------------------------------------------------------------YKARSAGK 159 (257)
T ss_pred ------------------------------------------------------------------------eeccCCCC
Confidence 00001112
Q ss_pred CCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHH
Q 011302 331 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLI 409 (489)
Q Consensus 331 Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li 409 (489)
+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+....+..+... + ..... ..++.+||
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~-~~~~~------~~~l~~li 231 (257)
T cd05115 160 WPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL-D-CPAEC------PPEMYALM 231 (257)
T ss_pred CCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-C-CCCCC------CHHHHHHH
Confidence 4678999999998889999999999999999996 99999988877766665554321 1 11111 12588999
Q ss_pred HHHhhcCcccccCCC
Q 011302 410 SKLLVKNPKKRIGSL 424 (489)
Q Consensus 410 ~~~L~~dP~~R~~~~ 424 (489)
.+||..||++||++.
T Consensus 232 ~~c~~~~~~~Rp~~~ 246 (257)
T cd05115 232 KDCWIYKWEDRPNFA 246 (257)
T ss_pred HHHcCCChhhCcCHH
Confidence 999999999999986
No 332
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=9.9e-41 Score=328.37 Aligned_cols=268 Identities=25% Similarity=0.335 Sum_probs=204.5
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
+...++|++.+.||+|+||.||+|.++. +++.||+|+++..... ......+.+|+.+++.++||||+++++++.
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~ 76 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKD-----TGELVALKKVRLDNEK-EGFPITAIREIKILRQLNHRNIVNLKEIVT 76 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECC-----CCcEEEEEEEeecccc-cCchHHHHHHHHHHHhCCCCCeeeeeheec
Confidence 3456899999999999999999999986 4678999999754321 112234556999999999999999999887
Q ss_pred cCc----------eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCc
Q 011302 160 ASH----------YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGH 229 (489)
Q Consensus 160 ~~~----------~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~ 229 (489)
+.. .+|+||||+++ +|...+... ...+++..+..++.||+.||+|||++||+||||||+||+++.++.
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 77 DKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred CcchhhhccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCc
Confidence 654 89999999965 777766654 346899999999999999999999999999999999999999999
Q ss_pred EEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCc
Q 011302 230 IMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQ 309 (489)
Q Consensus 230 vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (489)
+||+|||++.......
T Consensus 155 ~kl~dfg~~~~~~~~~---------------------------------------------------------------- 170 (302)
T cd07864 155 IKLADFGLARLYNSEE---------------------------------------------------------------- 170 (302)
T ss_pred EEeCcccccccccCCc----------------------------------------------------------------
Confidence 9999999974321100
Q ss_pred cccCCccccccccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc---CC
Q 011302 310 ELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---KP 385 (489)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~ 385 (489)
........++..|+|||.+.+. .++.++|||||||++|||++|++||...+..+.+..+.. .+
T Consensus 171 -------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T cd07864 171 -------------SRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237 (302)
T ss_pred -------------ccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 0001112467889999998754 478999999999999999999999988776655544433 11
Q ss_pred C--CCCCCCCCC---------------chhH-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 386 L--TFPRIGVSS---------------SKEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 386 ~--~~p~~~~~~---------------~~~~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
. .+|...... ...+ ..+..+.+||.+||..||.+||++. +++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~----~il~~~~~ 302 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAE----EALNSPWL 302 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHH----HHhcCCCC
Confidence 1 111110000 0000 1134689999999999999999987 99999997
No 333
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.6e-40 Score=317.84 Aligned_cols=245 Identities=22% Similarity=0.285 Sum_probs=194.5
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
++||+|+||.||+|.+..... ....||+|.+...... .....+..|+.+++.++||||+++++++. .+..++|||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~--~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e 75 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSG--KEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVME 75 (257)
T ss_pred CccCccCceeEEEeEeeccCC--CcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEE
Confidence 469999999999998765321 3478999999866543 33456777999999999999999999876 456899999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
|+++|+|.+++... ..+++..+..++.|++.||+|||.++++||||||+|||++.++.+||+|||+++.+......
T Consensus 76 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~-- 151 (257)
T cd05060 76 LAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY-- 151 (257)
T ss_pred eCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc--
Confidence 99999999999875 36899999999999999999999999999999999999999999999999998433210000
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
.......
T Consensus 152 -------------------------------------------------------------------------~~~~~~~ 158 (257)
T cd05060 152 -------------------------------------------------------------------------YRATTAG 158 (257)
T ss_pred -------------------------------------------------------------------------cccccCc
Confidence 0000111
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.++..|+|||.+.+..++.++|||||||++|||++ |..||...+..+....+..... .+... . .+..+.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~-~------~~~~l~~l 230 (257)
T cd05060 159 RWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER-LPRPE-E------CPQEIYSI 230 (257)
T ss_pred cccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc-CCCCC-C------CCHHHHHH
Confidence 24568999999998889999999999999999997 9999988877666666554321 11111 1 11258899
Q ss_pred HHHHhhcCcccccCCC
Q 011302 409 ISKLLVKNPKKRIGSL 424 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~ 424 (489)
|.+||..+|++||++.
T Consensus 231 i~~cl~~~p~~Rp~~~ 246 (257)
T cd05060 231 MLSCWKYRPEDRPTFS 246 (257)
T ss_pred HHHHhcCChhhCcCHH
Confidence 9999999999999987
No 334
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.6e-40 Score=323.82 Aligned_cols=258 Identities=24% Similarity=0.309 Sum_probs=198.5
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCC-----------CCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPM-----------VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF 150 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~-----------~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 150 (489)
..++|++.+.||+|+||.||+|.+.+.. .......||+|++..... ......+.+|+.+++.++|+|
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~E~~~l~~l~~~~ 80 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN--KNARNDFLKEIKIMSRLKDPN 80 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCC
Confidence 3468999999999999999999765421 112345789999875421 233456778999999999999
Q ss_pred cccccceeecCceEEEEEeecCCCchHHHHHhCCC---------CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCC
Q 011302 151 LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPG---------KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPEN 221 (489)
Q Consensus 151 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~---------~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~N 221 (489)
|+++++++...+..|+||||+++|+|.+++..... ..+++..+..++.||+.||+|||++||+||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N 160 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN 160 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence 99999999999999999999999999998876421 246677899999999999999999999999999999
Q ss_pred eEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 011302 222 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 301 (489)
Q Consensus 222 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
||++.++.++|+|||+++.+....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~-------------------------------------------------------- 184 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGD-------------------------------------------------------- 184 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCc--------------------------------------------------------
Confidence 999999999999999984321100
Q ss_pred cCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh--CCCCCCCCCcHHHHH
Q 011302 302 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY--GTTPFKGENNEKTLI 379 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~~~~~~~~ 379 (489)
.........+++.|+|||.+.+..++.++|||||||++|||++ |..||...+..+.+.
T Consensus 185 --------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05095 185 --------------------YYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244 (296)
T ss_pred --------------------ceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 0000112245678999999988889999999999999999998 789998776655544
Q ss_pred HHhc------CCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 380 NILK------KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 380 ~i~~------~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.... .....+... .. ...+.+||.+||..||++||++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~-~~------~~~~~~li~~cl~~~p~~Rp~~~ 288 (296)
T cd05095 245 NTGEFFRDQGRQVYLPKPA-LC------PDSLYKLMLSCWRRNAKERPSFQ 288 (296)
T ss_pred HHHHHHhhccccccCCCCC-CC------CHHHHHHHHHHcCCCcccCCCHH
Confidence 3311 111111111 11 12588999999999999999997
No 335
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.8e-40 Score=327.99 Aligned_cols=256 Identities=26% Similarity=0.344 Sum_probs=206.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
..|...+.||+|+||.||+|+++. .+..+|+|.+............++..|+.+++.++|+||+++++++.....
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVR-----NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcC-----CCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCe
Confidence 458888999999999999999876 467899999875433223344567779999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||+. |+|.+++... ...+++..+..++.|++.||.|||+++++||||||+|||++.++.+||+|||++.....
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred eEEEEEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 999999995 6887776543 25689999999999999999999999999999999999999999999999998732110
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
T Consensus 168 -------------------------------------------------------------------------------- 167 (308)
T cd06634 168 -------------------------------------------------------------------------------- 167 (308)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccCCCCccCcchhcC---CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 324 ARSKSFVGTHEYLAPEVISG---QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
.....|++.|+|||.+.+ ..++.++|||||||++|+|++|..||...+.......+...... ..... .
T Consensus 168 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~-----~ 238 (308)
T cd06634 168 --ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP--ALQSG-----H 238 (308)
T ss_pred --cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCC--CcCcc-----c
Confidence 112358889999999853 45788999999999999999999999887665555555443221 11111 1
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
....+.+||.+||..+|++||++. +++.||||...
T Consensus 239 ~~~~~~~li~~cl~~~P~~Rp~~~----~ll~~~~~~~~ 273 (308)
T cd06634 239 WSEYFRNFVDSCLQKIPQDRPTSE----VLLKHRFVLRE 273 (308)
T ss_pred ccHHHHHHHHHHhhCCcccCCCHH----HHhhCcccccc
Confidence 112488999999999999999987 99999999773
No 336
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.8e-40 Score=319.78 Aligned_cols=256 Identities=22% Similarity=0.268 Sum_probs=202.1
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
..+|++.+.||+|+||.||+|.++.... ....||||++..... .....++..|+.+++.++||||+++++++.++.
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~--~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 78 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGK--REIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR 78 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCC--CceeEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC
Confidence 4579999999999999999999876422 245799999875421 233456778999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+++|+|.+++.... +.+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||++..+.
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence 9999999999999999887643 568999999999999999999999999999999999999999999999999874321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..... +.
T Consensus 158 ~~~~~-------------------------------------------------------------------------~~ 164 (269)
T cd05065 158 DDTSD-------------------------------------------------------------------------PT 164 (269)
T ss_pred cCccc-------------------------------------------------------------------------cc
Confidence 10000 00
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||...+..+....+... ...|.... .
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~-------~ 236 (269)
T cd05065 165 YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-YRLPPPMD-------C 236 (269)
T ss_pred cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCCccc-------C
Confidence 000001123457999999998889999999999999999886 99999888777666666432 22222111 1
Q ss_pred HhhHHHHHHHHhhcCcccccCCC
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..+.+++.+||..+|++||++.
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~ 259 (269)
T cd05065 237 PTALHQLMLDCWQKDRNARPKFG 259 (269)
T ss_pred CHHHHHHHHHHcCCChhhCcCHH
Confidence 12488999999999999999997
No 337
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.6e-40 Score=323.84 Aligned_cols=262 Identities=29% Similarity=0.418 Sum_probs=205.3
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC--ce
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--HY 163 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~ 163 (489)
|.+.+.||+|+||.||+|.+.. .++.||+|++.... ........+.+|+.+++.++||||+++++++.+. +.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~-----~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKK-----TGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECC-----CCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCc
Confidence 6789999999999999999886 56889999998653 1122334566799999999999999999999888 89
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccccc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
.|+||||++ ++|..++.... ..+++..+..++.||+.||+|||++|++|+||||+|||++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 75 IYMVFEYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred EEEEecccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 999999996 58988876542 4799999999999999999999999999999999999999999999999999743211
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
.. .
T Consensus 153 ~~-----------------------------------------------------------------------------~ 155 (287)
T cd07840 153 RN-----------------------------------------------------------------------------S 155 (287)
T ss_pred CC-----------------------------------------------------------------------------c
Confidence 00 0
Q ss_pred cCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCC-----CCCCCCCCC---
Q 011302 324 ARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP-----LTFPRIGVS--- 394 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-----~~~p~~~~~--- 394 (489)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||...+....+..+.... ..++.....
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWF 235 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhh
Confidence 001122567889999988764 57899999999999999999999999888766655554311 011110000
Q ss_pred --------Cc----hhHH--HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 395 --------SS----KEFE--EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 395 --------~~----~~~~--~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.. ..+. ....+.++|.+||..+|.+||++. +++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~----~~l~~~~~ 287 (287)
T cd07840 236 ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISAD----QALQHEYF 287 (287)
T ss_pred hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHH----HHhhCcCC
Confidence 00 0001 134688999999999999999997 99999998
No 338
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.9e-40 Score=321.90 Aligned_cols=260 Identities=28% Similarity=0.444 Sum_probs=203.4
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCceE
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHYS 164 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~ 164 (489)
|++.+.||+|+||+||+|.... +++.|+||.+....... ......+|+..++.++ ||||+++++++.+++..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~-----~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 73 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKE-----TGELVAIKKMKKKFYSW--EECMNLREVKSLRKLNEHPNIVKLKEVFRENDEL 73 (283)
T ss_pred CeeheeeccCCceEEEEEEECC-----CCcEEEEEEehhhccch--hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcE
Confidence 6788999999999999999876 46789999987553221 1122345888899999 99999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
|+||||+ +|+|.+.+.......+++..+..++.|++.+|.|||++|++|+||||+||+++.++.++|+|||+++.....
T Consensus 74 ~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 74 YFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred EEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 9999999 889999887764457899999999999999999999999999999999999999999999999987322100
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
.
T Consensus 153 -------------------------------------------------------------------------------~ 153 (283)
T cd07830 153 -------------------------------------------------------------------------------P 153 (283)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC---CC--------------
Q 011302 325 RSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK---PL-------------- 386 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~---~~-------------- 386 (489)
......|+..|+|||++.+ ..++.++|+|||||++|||++|++||.+....+.+.++... +.
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 1122358889999998854 44789999999999999999999999887766555443321 00
Q ss_pred --CCCCCCCCCchhH--HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 387 --TFPRIGVSSSKEF--EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 387 --~~p~~~~~~~~~~--~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.++.......... .....+.+||++||..||++||++. +++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~----ei~~~~~~ 283 (283)
T cd07830 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTAS----QALQHPYF 283 (283)
T ss_pred cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHH----HHhhCCCC
Confidence 0000000000000 1124689999999999999999987 99999998
No 339
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2e-40 Score=322.68 Aligned_cols=261 Identities=28% Similarity=0.410 Sum_probs=205.7
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEE
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 165 (489)
|.+.+.||+|++|.||+|.+.. .++.+++|.+...... ......+..|+.+++.++|+||+++++++.++...|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 74 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKL-----TGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLY 74 (283)
T ss_pred CccceeeecCCCceEEEEEcCC-----CCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEE
Confidence 6678899999999999999875 5688999998755332 123456677999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCc
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVP 245 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~ 245 (489)
+||||++ ++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||.+.......
T Consensus 75 ~v~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 75 LVFEFMD-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred EEEeccC-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 9999996 58888776643 578999999999999999999999999999999999999999999999999873321100
Q ss_pred cccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccC
Q 011302 246 KLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 325 (489)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (489)
..
T Consensus 153 ------------------------------------------------------------------------------~~ 154 (283)
T cd05118 153 ------------------------------------------------------------------------------RP 154 (283)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred CccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCC------------------
Q 011302 326 SKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL------------------ 386 (489)
Q Consensus 326 ~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~------------------ 386 (489)
.....++..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 1123578899999999877 689999999999999999999999988877665544432100
Q ss_pred -CCCCCCCCCch--hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 387 -TFPRIGVSSSK--EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 387 -~~p~~~~~~~~--~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.++........ ....+.++.+||.+||..||.+||++. +++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~----~ll~~~~~ 283 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAE----QALAHPYF 283 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHH----HHhhCCCC
Confidence 01100000000 011234689999999999999999998 99999997
No 340
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.5e-40 Score=329.72 Aligned_cols=262 Identities=27% Similarity=0.381 Sum_probs=202.1
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec-
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA- 160 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~- 160 (489)
..++|++.+.||.|+||.||+|.+.. +++.||||++.+.... ......+..|+.+++.++||||++++++|..
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~-----~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 81 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQL-----TGQNVAIKKIMKPFST-PVLAKRTYRELKLLKHLRHENIISLSDIFISP 81 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECC-----CCCEEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence 45789999999999999999999886 5788999988653221 1233456679999999999999999999865
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
....|+||||+ +++|..++.. ..+++..+..++.||+.||.|||++||+||||||.|||++.++.+||+|||+++.
T Consensus 82 ~~~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 82 LEDIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred CCcEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 56899999999 6789887764 4588888999999999999999999999999999999999999999999998732
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
..
T Consensus 158 ~~------------------------------------------------------------------------------ 159 (328)
T cd07856 158 QD------------------------------------------------------------------------------ 159 (328)
T ss_pred cC------------------------------------------------------------------------------
Confidence 11
Q ss_pred ccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc---CCC----------
Q 011302 321 PINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---KPL---------- 386 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---~~~---------- 386 (489)
.......|++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+.......+.+ .+.
T Consensus 160 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd07856 160 ---PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSE 236 (328)
T ss_pred ---CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccch
Confidence 01122357889999999876 5689999999999999999999999987765332222111 000
Q ss_pred -------CCCCCCCCC-chhH-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 387 -------TFPRIGVSS-SKEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 387 -------~~p~~~~~~-~~~~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
..+...... .... .....+.++|.+||+.+|++||++. +++.||||+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~----ell~~~~~~~ 293 (328)
T cd07856 237 NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAA----EALAHPYLAP 293 (328)
T ss_pred hhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHH----HHhcCCcccc
Confidence 000000000 0000 1123589999999999999999987 9999999964
No 341
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.6e-41 Score=322.69 Aligned_cols=251 Identities=28% Similarity=0.412 Sum_probs=195.6
Q ss_pred eeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEE
Q 011302 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCL 166 (489)
Q Consensus 87 ~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 166 (489)
.+.+.||.|.||.||+|.++. .....+..|+||.++.... ......+.+|+.+++.++||||+++++++...+..++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~-~~~~~~~~V~vk~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQ-KDNDKNQPVAVKILKPSSS--EEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEES-TTTSSEEEEEEEEESTTSS--HHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEc-ccCCCCEEEEEEEeccccc--cccceeeeecccccccccccccccccccccccccccc
Confidence 467899999999999999993 1223578899999964221 1235667779999999999999999999998888999
Q ss_pred EEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcc
Q 011302 167 VMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPK 246 (489)
Q Consensus 167 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 246 (489)
|||||++|+|.+++.......+++..+..|+.||+.||.|||+++|+|+||+++|||++.++.+||+|||++........
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999887556799999999999999999999999999999999999999999999999999743210000
Q ss_pred ccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCC
Q 011302 247 LLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARS 326 (489)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (489)
....
T Consensus 159 ----------------------------------------------------------------------------~~~~ 162 (259)
T PF07714_consen 159 ----------------------------------------------------------------------------YKND 162 (259)
T ss_dssp ----------------------------------------------------------------------------EEES
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0001
Q ss_pred ccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhH
Q 011302 327 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKL 405 (489)
Q Consensus 327 ~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l 405 (489)
....+...|+|||.+.+..++.++||||||+++|||++ |+.||...+..+....+..+.. .+ ....... .+
T Consensus 163 ~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~~~------~~ 234 (259)
T PF07714_consen 163 SSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-LP-IPDNCPK------DI 234 (259)
T ss_dssp TTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE-TT-SBTTSBH------HH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ce-eccchhH------HH
Confidence 12235678999999998889999999999999999999 7899998888777777755432 21 1111122 48
Q ss_pred HHHHHHHhhcCcccccCCC
Q 011302 406 QDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 406 ~~li~~~L~~dP~~R~~~~ 424 (489)
.+||.+||..||++||++.
T Consensus 235 ~~li~~C~~~~p~~RPs~~ 253 (259)
T PF07714_consen 235 YSLIQQCWSHDPEKRPSFQ 253 (259)
T ss_dssp HHHHHHHT-SSGGGS--HH
T ss_pred HHHHHHHcCCChhhCcCHH
Confidence 8999999999999999987
No 342
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.1e-41 Score=357.73 Aligned_cols=275 Identities=29% Similarity=0.363 Sum_probs=207.0
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC-
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~- 161 (489)
..+|+.++.||+||||.||+|+.+- +++.||||.+.... .......+.+|+.+|++|+|||||++|..|...
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKl-----DGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~ 550 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKL-----DGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVEST 550 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecc-----cchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccC
Confidence 3688999999999999999999885 78999999998665 356677888999999999999999998766100
Q ss_pred --------------------------------------------------------------------------------
Q 011302 162 -------------------------------------------------------------------------------- 161 (489)
Q Consensus 162 -------------------------------------------------------------------------------- 161 (489)
T Consensus 551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~ 630 (1351)
T KOG1035|consen 551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL 630 (1351)
T ss_pred CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence
Q ss_pred --------------------------------------ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHH
Q 011302 162 --------------------------------------HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLA 203 (489)
Q Consensus 162 --------------------------------------~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~ 203 (489)
..+||-||||+...|.+++.++.... ....+..+++||++|
T Consensus 631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEG 709 (1351)
T ss_pred ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHH
Confidence 12689999999988888888763211 467889999999999
Q ss_pred HHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccc
Q 011302 204 LEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVS 283 (489)
Q Consensus 204 L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (489)
|.|+|++|||||||||.||+++.++.|||+|||+|+.........
T Consensus 710 LaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~----------------------------------- 754 (1351)
T KOG1035|consen 710 LAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESI----------------------------------- 754 (1351)
T ss_pred HHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhH-----------------------------------
Confidence 999999999999999999999999999999999995422100000
Q ss_pred cccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCC---CCCcccHHHHHHHHH
Q 011302 284 HGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG---HGSAVDWWTLGVFLY 360 (489)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~~~~~DiwSlGvil~ 360 (489)
++.+. .............++.+||.-|+|||++.+.. |+.|+|+|||||||+
T Consensus 755 ----------------d~~~~---------~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlF 809 (1351)
T KOG1035|consen 755 ----------------DQDLS---------FSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLF 809 (1351)
T ss_pred ----------------hhccC---------ccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHH
Confidence 00000 00000111122345679999999999998765 999999999999999
Q ss_pred HHhhCCCCCCCCCcH-HHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcC
Q 011302 361 EMLYGTTPFKGENNE-KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 361 elltG~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
||+. ||...-+. .++..+.++.+..|.. -..+..+.-..+|+.||+.||.+|||+. +||++.||-
T Consensus 810 EM~y---PF~TsMERa~iL~~LR~g~iP~~~~-----f~~~~~~~e~slI~~Ll~hdP~kRPtA~----eLL~s~llp 875 (1351)
T KOG1035|consen 810 EMLY---PFGTSMERASILTNLRKGSIPEPAD-----FFDPEHPEEASLIRWLLSHDPSKRPTAT----ELLNSELLP 875 (1351)
T ss_pred HHhc---cCCchHHHHHHHHhcccCCCCCCcc-----cccccchHHHHHHHHHhcCCCccCCCHH----HHhhccCCC
Confidence 9995 47554443 3444555444444410 0112223467999999999999999998 999999986
No 343
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=370.01 Aligned_cols=259 Identities=29% Similarity=0.447 Sum_probs=211.4
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+++-...||.|.||.||-|...+ ++...|+|-++..... ......+.+|..++..++|||+|++||+=.+.+.+
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~-----tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLD-----TGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred eeccccccCCcceeeeEEeecCC-----ccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 34556679999999999999888 6788899988755443 45566777899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
||.||||.||+|.++++.. +..++...+.|-.|++.||.|||++|||||||||+||+|+.+|-+|++|||.|..+...
T Consensus 1310 ~IFMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHHHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 9999999999999998874 56788888999999999999999999999999999999999999999999998554321
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
-.. ...
T Consensus 1388 ~~~--------------------------------------------------------------------------~~~ 1393 (1509)
T KOG4645|consen 1388 AQT--------------------------------------------------------------------------MPG 1393 (1509)
T ss_pred hhc--------------------------------------------------------------------------CCH
Confidence 000 001
Q ss_pred CCccccCCCCccCcchhcCC---CCCCcccHHHHHHHHHHHhhCCCCCCCCCc-HHHHHHHhcCC-CCCCCCCCCCchhH
Q 011302 325 RSKSFVGTHEYLAPEVISGQ---GHGSAVDWWTLGVFLYEMLYGTTPFKGENN-EKTLINILKKP-LTFPRIGVSSSKEF 399 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~-~~~p~~~~~~~~~~ 399 (489)
.....+|||.|||||++.+. +...+.|||||||++.||+||+.||...++ .+++..+..+. +.+|.. .
T Consensus 1394 el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~--l----- 1466 (1509)
T KOG4645|consen 1394 ELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPER--L----- 1466 (1509)
T ss_pred HHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchh--h-----
Confidence 22356899999999999864 467899999999999999999999987654 45555555443 233433 1
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
..+.+|||..||+.||++|+++. ||+.|-|=+.
T Consensus 1467 --s~~g~dFle~Cl~~dP~~Rw~~~----qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1467 --SSEGRDFLEHCLEQDPKMRWTAS----QLLEHAFGKS 1499 (1509)
T ss_pred --hHhHHHHHHHHHhcCchhhhHHH----HHHHhhcccc
Confidence 12479999999999999999987 9999977543
No 344
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.7e-40 Score=316.14 Aligned_cols=241 Identities=22% Similarity=0.271 Sum_probs=195.9
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|++.+.||+|+||.||++... ++.||+|.+..+.. ...+.+|+.+++.++||||+++++++..+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~iK~~~~~~~-----~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 71 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEYT-------GQKVAVKNIKCDVT-----AQAFLEETAVMTKLHHKNLVRLLGVILHN 71 (254)
T ss_pred cHHHceeeeeeccCCCCceEecccC-------CCceEEEeecCcch-----HHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 4578999999999999999998643 46789999865422 24567799999999999999999998765
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
..|+||||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||+++..
T Consensus 72 -~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 72 -GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVG 150 (254)
T ss_pred -CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceec
Confidence 4799999999999999998765556899999999999999999999999999999999999999999999999987321
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
..
T Consensus 151 ~~------------------------------------------------------------------------------ 152 (254)
T cd05083 151 SM------------------------------------------------------------------------------ 152 (254)
T ss_pred cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+..+. ..+.. ..
T Consensus 153 ---~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~-~~------ 221 (254)
T cd05083 153 ---GVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY-RMEPP-EG------ 221 (254)
T ss_pred ---cCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC-CCCCC-Cc------
Confidence 0001123467999999998889999999999999999997 999999887776666555432 21111 11
Q ss_pred HHhhHHHHHHHHhhcCcccccCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+..+.+||.+||..+|++||++.
T Consensus 222 ~~~~~~~li~~~l~~~p~~Rp~~~ 245 (254)
T cd05083 222 CPADVYVLMTSCWETEPKKRPSFH 245 (254)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHH
Confidence 113588999999999999999986
No 345
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.8e-40 Score=317.56 Aligned_cols=249 Identities=19% Similarity=0.278 Sum_probs=188.1
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||+||+|..... .....+|+|.+..... ......+.+|+.+++.++||||+++++.+.....+|+|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~---~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRG---MSKARVVVKELRASAT--PDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecC---CCCeEEEEeecCccCC--hHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEE
Confidence 3689999999999976542 2456789998764321 2233456779999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCCC---CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcc
Q 011302 170 YCPGGDLYAARQRQPG---KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPK 246 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 246 (489)
|+++|+|.+++..... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh
Confidence 9999999999876432 2346778889999999999999999999999999999999999999999998732110000
Q ss_pred ccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCC
Q 011302 247 LLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARS 326 (489)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (489)
....
T Consensus 156 ----------------------------------------------------------------------------~~~~ 159 (269)
T cd05042 156 ----------------------------------------------------------------------------YITK 159 (269)
T ss_pred ----------------------------------------------------------------------------eecc
Confidence 0001
Q ss_pred ccccCCCCccCcchhcC-------CCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcC-CCCCCCCCCCCch
Q 011302 327 KSFVGTHEYLAPEVISG-------QGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKK-PLTFPRIGVSSSK 397 (489)
Q Consensus 327 ~~~~Gt~~y~aPE~l~~-------~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~ 397 (489)
....+++.|+|||++.. ..++.++|||||||++|||++ |..||....+.+.+..+... ...++......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDL-- 237 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccc--
Confidence 12246778999999753 346889999999999999998 88999887776666555443 22222221110
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.....+.+++..|+ .||++||++.
T Consensus 238 --~~~~~~~~~~~~~~-~dp~~Rpt~~ 261 (269)
T cd05042 238 --KYSDRWYEVMQFCW-LDPETRPTAE 261 (269)
T ss_pred --cCCHHHHHHHHHHh-cCcccccCHH
Confidence 11224678898888 5999999986
No 346
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.2e-40 Score=319.40 Aligned_cols=253 Identities=22% Similarity=0.258 Sum_probs=190.6
Q ss_pred CCc-eeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec--
Q 011302 84 DHF-RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA-- 160 (489)
Q Consensus 84 ~~y-~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-- 160 (489)
++| ++++.||+|+||+||++...... ...++.||+|++...... .....+.+|+.+|+.++||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPAN-DGTGEMVAVKTLKRECGQ--QNTSGWKKEINILKTLYHENIVKYKGCCSEQG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEcccc-CCCCceEEEEEeccccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 345 89999999999999998754321 225678999999754221 223456679999999999999999998764
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
...+|+||||+++|+|.+++... .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccc
Confidence 34689999999999999988763 599999999999999999999999999999999999999999999999999843
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+......
T Consensus 157 ~~~~~~~------------------------------------------------------------------------- 163 (283)
T cd05080 157 VPEGHEY------------------------------------------------------------------------- 163 (283)
T ss_pred cCCcchh-------------------------------------------------------------------------
Confidence 3210000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHH--------------HHHHHhcCCC
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK--------------TLINILKKPL 386 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~--------------~~~~i~~~~~ 386 (489)
........++..|+|||.+.+..++.++|||||||++|||++|..||....... .+........
T Consensus 164 --~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T cd05080 164 --YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGM 241 (283)
T ss_pred --hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCC
Confidence 000011235667999999998889999999999999999999999986533210 0011111111
Q ss_pred CCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 387 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 387 ~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..+.. . .....+.+|+.+||+.+|++||++.
T Consensus 242 ~~~~~-~------~~~~~~~~li~~cl~~~p~~Rps~~ 272 (283)
T cd05080 242 RLPCP-K------NCPQEVYILMKNCWETEAKFRPTFR 272 (283)
T ss_pred CCCCC-C------CCCHHHHHHHHHHhccChhhCCCHH
Confidence 11110 0 1123589999999999999999997
No 347
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=8.8e-40 Score=318.10 Aligned_cols=255 Identities=21% Similarity=0.259 Sum_probs=202.9
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|++.+.||+|+||.||+|.++.... .....||+|.+..... ......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~-~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGE-KVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS 80 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCC-CcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 345789999999999999999999875322 2345789998875532 2344567779999999999999999999887
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
...++||||+++|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccc
Confidence 78999999999999999987653 4589999999999999999999999999999999999999999999999999844
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+.......
T Consensus 159 ~~~~~~~~------------------------------------------------------------------------ 166 (279)
T cd05057 159 LDVDEKEY------------------------------------------------------------------------ 166 (279)
T ss_pred ccCcccce------------------------------------------------------------------------
Confidence 32100000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
......++..|+|||.+....++.++|||||||++|||++ |..||.+....+....+..+. ..+.... ..
T Consensus 167 ----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~-~~--- 237 (279)
T cd05057 167 ----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE-RLPQPPI-CT--- 237 (279)
T ss_pred ----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC-CCCCCCC-CC---
Confidence 0001124568999999988889999999999999999998 999999887766666655432 1222111 11
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..+.+++.+||..||++||++.
T Consensus 238 ---~~~~~~~~~~l~~~p~~Rp~~~ 259 (279)
T cd05057 238 ---IDVYMVLVKCWMIDAESRPTFK 259 (279)
T ss_pred ---HHHHHHHHHHcCCChhhCCCHH
Confidence 2488999999999999999987
No 348
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1e-39 Score=315.89 Aligned_cols=249 Identities=20% Similarity=0.280 Sum_probs=187.3
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||.||+|.+.+. .+...+|+|.++..... .....+.+|+.+++.++||||+++++++.+....|+|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~---~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSG---YTPAQVVVKELRVSASV--QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCC---CCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEE
Confidence 3689999999999987642 24567899988654321 222356779999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCC---CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcc
Q 011302 170 YCPGGDLYAARQRQP---GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPK 246 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 246 (489)
|+++|+|.+++.... ...+++..++.++.|++.||+|||+++++||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~- 154 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED- 154 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcc-
Confidence 999999999887532 1245667788899999999999999999999999999999999999999999873211000
Q ss_pred ccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCC
Q 011302 247 LLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARS 326 (489)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (489)
.....
T Consensus 155 ---------------------------------------------------------------------------~~~~~ 159 (269)
T cd05087 155 ---------------------------------------------------------------------------YYVTP 159 (269)
T ss_pred ---------------------------------------------------------------------------eeecC
Confidence 00011
Q ss_pred ccccCCCCccCcchhcCC-------CCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhc-CCCCCCCCCCCCch
Q 011302 327 KSFVGTHEYLAPEVISGQ-------GHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILK-KPLTFPRIGVSSSK 397 (489)
Q Consensus 327 ~~~~Gt~~y~aPE~l~~~-------~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~-~~~~~p~~~~~~~~ 397 (489)
....|++.|+|||++.+. .++.++|||||||++|||++ |..||...+..+....... ....++......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKL-- 237 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCC--
Confidence 223578899999998643 35789999999999999996 9999987766554433322 222222211110
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.....+.+||.+|+ .+|++||++.
T Consensus 238 --~~~~~~~~l~~~c~-~~P~~Rpt~~ 261 (269)
T cd05087 238 --PLSDRWYEVMQFCW-LQPEQRPSAE 261 (269)
T ss_pred --CCChHHHHHHHHHh-cCcccCCCHH
Confidence 01124789999998 6899999997
No 349
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.3e-40 Score=331.37 Aligned_cols=270 Identities=29% Similarity=0.396 Sum_probs=204.8
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeec-
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA- 160 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~- 160 (489)
.++|.+.+.||+|+||.||+|.+.. +++.||+|.+.+.... ......+.+|+.+++.+ +||||+++++++..
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~vK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~ 79 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRR-----TKEVVALKKIFDAFRN-ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE 79 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcC-----CCeEEEEEeeccccCc-chhhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence 4689999999999999999999875 4678999988543211 12234566799999999 99999999998864
Q ss_pred -CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 161 -SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 161 -~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
...+|+||||++ ++|..++... .+.+..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.
T Consensus 80 ~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 80 NDKDIYLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred CCceEEEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 347899999995 6998887653 68888999999999999999999999999999999999999999999999984
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.+......
T Consensus 156 ~~~~~~~~------------------------------------------------------------------------ 163 (337)
T cd07852 156 SLSELEEN------------------------------------------------------------------------ 163 (337)
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 33210000
Q ss_pred cccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCC---------
Q 011302 320 EPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP--------- 389 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p--------- 389 (489)
........+.||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+....+...++.......+
T Consensus 164 -~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07852 164 -PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS 242 (337)
T ss_pred -ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHh
Confidence 00011223468999999998865 4478899999999999999999999988766555444332110000
Q ss_pred -----------CCCCCCchh--HHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 390 -----------RIGVSSSKE--FEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 390 -----------~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
......... .....++.+||.+||+.||++||++. ++++||||+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~----~il~~~~~~~~ 301 (337)
T cd07852 243 PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAE----EALEHPYVAQF 301 (337)
T ss_pred hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHH----HHhhChhhhhh
Confidence 000000000 01123589999999999999999987 99999999876
No 350
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=7.3e-40 Score=314.27 Aligned_cols=250 Identities=23% Similarity=0.298 Sum_probs=201.6
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
..+|++.+.||+|+||.||+|.+.. +..+|+|.+...... ...+..|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~------~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 72 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLE------KRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERS 72 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeC------CCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCC
Confidence 4689999999999999999998763 356899988754322 124567999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||+++++|.+++.... ..+++..+..++.|++.||+|||+++++||||||+||+++.++.+||+|||++....
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 151 (256)
T cd05112 73 PICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVL 151 (256)
T ss_pred ceEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecc
Confidence 9999999999999999887643 468899999999999999999999999999999999999999999999999873221
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
.. .
T Consensus 152 ~~-----------------------------------------------------------------------------~ 154 (256)
T cd05112 152 DD-----------------------------------------------------------------------------Q 154 (256)
T ss_pred cC-----------------------------------------------------------------------------c
Confidence 00 0
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEE 401 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 401 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||...........+..+...+.... ..
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~----- 227 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRL--AS----- 227 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCC--CC-----
Confidence 000112235678999999998889999999999999999998 9999988877777766654422111111 11
Q ss_pred HhhHHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 402 VVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 402 ~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
..+.+|+.+||+.+|++||++. ++++
T Consensus 228 -~~~~~l~~~~l~~~p~~Rp~~~----~~l~ 253 (256)
T cd05112 228 -QSVYELMQHCWKERPEDRPSFS----LLLH 253 (256)
T ss_pred -HHHHHHHHHHcccChhhCCCHH----HHHH
Confidence 2589999999999999999987 6665
No 351
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.8e-40 Score=317.98 Aligned_cols=243 Identities=23% Similarity=0.287 Sum_probs=189.3
Q ss_pred eeeccCCceeEEEEEEccCCC--CCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMV--GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLV 167 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 167 (489)
+.||+|+||.||+|.++.... ......||+|.+.... ......+..|..+++.++||||+++++++..+...++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999999865321 1234557888876543 23344567799999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCc--------EEEcccCCCc
Q 011302 168 MEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGH--------IMLSDFDLSF 239 (489)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~--------vkl~DFG~a~ 239 (489)
|||+++|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++|||++.
T Consensus 78 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999999987653 36889999999999999999999999999999999999987765 6899999863
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
...
T Consensus 157 ~~~----------------------------------------------------------------------------- 159 (258)
T cd05078 157 TVL----------------------------------------------------------------------------- 159 (258)
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 211
Q ss_pred cccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhC-CCCCCCCCcHHHHHHHhcCCCCCCCCCCCCch
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYG-TTPFKGENNEKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
......|++.|+|||++.+. .++.++|||||||++|||++| ..||...+...... +......+|....
T Consensus 160 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---- 229 (258)
T cd05078 160 -----PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYEDRHQLPAPKW---- 229 (258)
T ss_pred -----CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHccccCCCCCc----
Confidence 01123578899999999874 478999999999999999998 56766655544332 3333333332211
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
.++.+||.+||+.||++||++. ++++
T Consensus 230 -----~~~~~li~~~l~~~p~~Rps~~----~il~ 255 (258)
T cd05078 230 -----TELANLINQCMDYEPDFRPSFR----AIIR 255 (258)
T ss_pred -----HHHHHHHHHHhccChhhCCCHH----HHHH
Confidence 2488999999999999999997 6665
No 352
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=8.4e-40 Score=319.18 Aligned_cols=258 Identities=23% Similarity=0.288 Sum_probs=195.5
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC--c
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS--H 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~ 162 (489)
-|++++.||+|+||.||+|++.... ..++..||+|.++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEG-DNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCC-CCccceEEEEEcCcccc--HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 4789999999999999999865321 12578899999875432 23345677899999999999999999988765 6
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|+||||++|++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 7899999999999999987643 468999999999999999999999999999999999999999999999999984321
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
.....
T Consensus 161 ~~~~~--------------------------------------------------------------------------- 165 (284)
T cd05079 161 TDKEY--------------------------------------------------------------------------- 165 (284)
T ss_pred cCccc---------------------------------------------------------------------------
Confidence 10000
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCC--------------cHHHHHHHhcCCCCC
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN--------------NEKTLINILKKPLTF 388 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--------------~~~~~~~i~~~~~~~ 388 (489)
........|+..|+|||++.+..++.++|||||||++|||+++..|+.... ...............
T Consensus 166 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (284)
T cd05079 166 YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRL 245 (284)
T ss_pred eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccC
Confidence 000122357778999999998889999999999999999999877653211 111111222222222
Q ss_pred CCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 389 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 389 p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
+.... ....+.+||.+||+.||++||++. ++++
T Consensus 246 ~~~~~-------~~~~~~~li~~~l~~~p~~Rpt~~----~il~ 278 (284)
T cd05079 246 PRPPN-------CPEEVYQLMRKCWEFQPSKRTTFQ----NLIE 278 (284)
T ss_pred CCCCC-------CCHHHHHHHHHHccCCcccCcCHH----HHHH
Confidence 21111 123589999999999999999987 6654
No 353
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3.5e-40 Score=313.36 Aligned_cols=233 Identities=29% Similarity=0.414 Sum_probs=186.1
Q ss_pred CCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeecCCC
Q 011302 95 GDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGG 174 (489)
Q Consensus 95 G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg 174 (489)
|.||.||+|+++. +++.||+|.+.+.... ..|...+....||||+++++++.+.+..|+||||++||
T Consensus 4 g~~~~v~~~~~~~-----~~~~~~~K~i~~~~~~--------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 70 (237)
T cd05576 4 GVIDKVLLVMDTR-----TQQTFILKGLRKSSEY--------SRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGG 70 (237)
T ss_pred cccceEEEEEEcc-----CCcEEEEEeecchhhh--------hhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCC
Confidence 8999999999987 5788999999765321 12444455567999999999999999999999999999
Q ss_pred chHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchh
Q 011302 175 DLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSF 254 (489)
Q Consensus 175 ~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~ 254 (489)
+|.+++... ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++..+..
T Consensus 71 ~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~----------- 137 (237)
T cd05576 71 KLWSHISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED----------- 137 (237)
T ss_pred CHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccc-----------
Confidence 999988765 4589999999999999999999999999999999999999999999999998632210
Q ss_pred HHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCCC
Q 011302 255 EAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHE 334 (489)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~ 334 (489)
......++..
T Consensus 138 ----------------------------------------------------------------------~~~~~~~~~~ 147 (237)
T cd05576 138 ----------------------------------------------------------------------SCDGEAVENM 147 (237)
T ss_pred ----------------------------------------------------------------------ccccCCcCcc
Confidence 0011245678
Q ss_pred ccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhh
Q 011302 335 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLV 414 (489)
Q Consensus 335 y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~ 414 (489)
|+|||.+.+..++.++||||+||++|||++|..||....... . ......+|.. ....+++||.+||+
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~--~--~~~~~~~~~~---------~~~~~~~li~~~l~ 214 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI--N--THTTLNIPEW---------VSEEARSLLQQLLQ 214 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc--c--cccccCCccc---------CCHHHHHHHHHHcc
Confidence 999999988889999999999999999999999886432110 0 0011112211 12358999999999
Q ss_pred cCcccccCCCC-ChHHHHcCCCc
Q 011302 415 KNPKKRIGSLK-GSVEIKRHEFF 436 (489)
Q Consensus 415 ~dP~~R~~~~~-~~~~ll~hp~f 436 (489)
.||++|+++.. .++++++||||
T Consensus 215 ~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 215 FNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCHHHhcCCCccchHHHHcCCCC
Confidence 99999999743 36799999998
No 354
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=5.1e-40 Score=319.65 Aligned_cols=261 Identities=30% Similarity=0.433 Sum_probs=205.6
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEE
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 165 (489)
|++.+.||+|+||.||+|+... +++.||+|++...... ......+..|+.+++.++|+||+++++++.+.+..|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~-----~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 74 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKK-----TGEIVALKKIRLDNEE-EGIPSTALREISLLKELKHPNIVKLLDVIHTERKLY 74 (282)
T ss_pred CeeehcccccCcceEEEeeecC-----CCcEEEEEEecccccc-ccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceE
Confidence 6678899999999999999886 5788999999865311 223345667999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCc
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVP 245 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~ 245 (489)
+||||++ ++|.+++.... ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.+||+|||+++......
T Consensus 75 ~v~e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 152 (282)
T cd07829 75 LVFEYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL 152 (282)
T ss_pred EEecCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence 9999996 69999887653 469999999999999999999999999999999999999999999999999874321100
Q ss_pred cccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccC
Q 011302 246 KLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 325 (489)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (489)
..
T Consensus 153 ------------------------------------------------------------------------------~~ 154 (282)
T cd07829 153 ------------------------------------------------------------------------------RT 154 (282)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred CccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC------------------CC
Q 011302 326 SKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK------------------PL 386 (489)
Q Consensus 326 ~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~------------------~~ 386 (489)
.....++..|+|||.+.+. .++.++|||||||++|||++|..||.+.+..+.+.++... ..
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 1122467789999999876 7899999999999999999999999888766555444321 00
Q ss_pred CCCCCCCCCc-hhH-HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 387 TFPRIGVSSS-KEF-EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 387 ~~p~~~~~~~-~~~-~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.++....... ..+ .....+.++|.+||..||++||++. +++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~----~~l~~p~~ 282 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAK----EALKHPYF 282 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHH----HHhhCcCC
Confidence 1111100000 000 1134689999999999999999987 99999998
No 355
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.2e-40 Score=315.59 Aligned_cols=244 Identities=20% Similarity=0.235 Sum_probs=188.4
Q ss_pred eeeccCCceeEEEEEEccCCC-------CCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 90 RRLGSGDIGNVYLCQIRNPMV-------GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~-------~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
+.||+|+||.||+|+...... ......+++|++..... .....+.+|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR---DISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh---hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999998643211 11234688998865432 23345667889999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCc-------EEEccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGH-------IMLSDF 235 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~-------vkl~DF 235 (489)
..++||||+++|+|..++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++. +|++||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999998877654 256899999999999999999999999999999999999987664 899999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|++....
T Consensus 157 g~~~~~~------------------------------------------------------------------------- 163 (262)
T cd05077 157 GIPITVL------------------------------------------------------------------------- 163 (262)
T ss_pred CCCcccc-------------------------------------------------------------------------
Confidence 9873211
Q ss_pred cccccccccCCccccCCCCccCcchhc-CCCCCCcccHHHHHHHHHHHh-hCCCCCCCCCcHHHHHHHhcCCCCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPRIGV 393 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~ 393 (489)
......|+..|+|||.+. +..++.++|||||||++|||+ .|..||......+. ............
T Consensus 164 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~~~~~~--- 230 (262)
T cd05077 164 ---------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYEGQCMLVT--- 230 (262)
T ss_pred ---------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHhcCccCCC---
Confidence 011235788899999987 466899999999999999998 58999877654332 222222221111
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
+. ..++.+||.+||+.||++||++. +|+++
T Consensus 231 ~~------~~~~~~li~~cl~~dp~~Rp~~~----~il~~ 260 (262)
T cd05077 231 PS------CKELADLMTHCMNYDPNQRPFFR----AIMRD 260 (262)
T ss_pred CC------hHHHHHHHHHHcCCChhhCcCHH----HHHHh
Confidence 11 12588999999999999999997 77765
No 356
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.3e-39 Score=311.31 Aligned_cols=240 Identities=23% Similarity=0.320 Sum_probs=192.3
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
+.||+|+||.||+|...+ +..||+|++...... .....+..|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~ig~g~~g~vy~~~~~~------~~~~a~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 72 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKD------KTPVAVKTCKEDLPQ--ELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVME 72 (250)
T ss_pred CccCCCCCceEEEEEecC------CcEEEEEecCCcCCH--HHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEE
Confidence 368999999999998653 567899998654321 222356779999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
|+++++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 73 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---- 147 (250)
T cd05085 73 LVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI---- 147 (250)
T ss_pred CCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccc----
Confidence 999999999886543 468899999999999999999999999999999999999999999999999873211000
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
.......
T Consensus 148 -------------------------------------------------------------------------~~~~~~~ 154 (250)
T cd05085 148 -------------------------------------------------------------------------YSSSGLK 154 (250)
T ss_pred -------------------------------------------------------------------------cccCCCC
Confidence 0000111
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCC-CCCCCCCCCchhHHHHhhHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPL-TFPRIGVSSSKEFEEVVKLQD 407 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~~~l~~ 407 (489)
.++..|+|||++.+..++.++|||||||++|||++ |..||.+.........+..... ..+. . ....+.+
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~ 225 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQ---K------CPDDVYK 225 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCC---C------CCHHHHH
Confidence 34567999999998889999999999999999998 9999998877666666554321 1111 1 1235899
Q ss_pred HHHHHhhcCcccccCCC
Q 011302 408 LISKLLVKNPKKRIGSL 424 (489)
Q Consensus 408 li~~~L~~dP~~R~~~~ 424 (489)
|+.+||..+|++||++.
T Consensus 226 li~~~l~~~p~~Rp~~~ 242 (250)
T cd05085 226 VMQRCWDYKPENRPKFS 242 (250)
T ss_pred HHHHHcccCcccCCCHH
Confidence 99999999999999987
No 357
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.6e-39 Score=314.71 Aligned_cols=253 Identities=26% Similarity=0.335 Sum_probs=200.6
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|.+.+.||+|+||.||+|.+.+.. .....||||....... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 78 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPE--NEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFDHPHIVKLIGVITE 78 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCC--CCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCchhceeEEEcC
Confidence 34568999999999999999999976531 1345789998865431 1234567789999999999999999998876
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
...|+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||+++.
T Consensus 79 -~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 79 -NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred -CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeee
Confidence 45789999999999999987643 4689999999999999999999999999999999999999999999999999743
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+.....
T Consensus 157 ~~~~~~-------------------------------------------------------------------------- 162 (270)
T cd05056 157 LEDESY-------------------------------------------------------------------------- 162 (270)
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 211000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.......+++.|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+..+... +... ..
T Consensus 163 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~-~~---- 233 (270)
T cd05056 163 ---YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL-PMPP-NC---- 233 (270)
T ss_pred ---eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC-CCCC-CC----
Confidence 00011234568999999988889999999999999999996 99999988877766666554321 1111 11
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+..+.+||.+||..+|++||++.
T Consensus 234 --~~~~~~li~~~l~~~P~~Rpt~~ 256 (270)
T cd05056 234 --PPTLYSLMTKCWAYDPSKRPRFT 256 (270)
T ss_pred --CHHHHHHHHHHcCCChhhCcCHH
Confidence 12589999999999999999986
No 358
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=336.37 Aligned_cols=248 Identities=33% Similarity=0.484 Sum_probs=194.6
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc--
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH-- 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-- 162 (489)
-+...+.||+|+||.||+++++. +++.||||.+++... ....++..+|+++|++++|+|||+++++=++..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnke-----tG~~vAvK~~~~~~~--~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~ 86 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKE-----TGRLVAVKTFNKESS--LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLG 86 (732)
T ss_pred ceeehhhhcCCccceeeeecccc-----cccchhHHhhhhhcc--cchHHHHHHHHHHHHHcCchhhhhhcccCCccccC
Confidence 34556789999999999999887 789999999987652 234566778999999999999999999766544
Q ss_pred ----eEEEEEeecCCCchHHHHHhCC-CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEec--cCCc--EEEc
Q 011302 163 ----YSCLVMEYCPGGDLYAARQRQP-GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVR--EDGH--IMLS 233 (489)
Q Consensus 163 ----~~~lV~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~--~~~~--vkl~ 233 (489)
...+|||||.||+|+..+++-. ...|++.+.+.++..++.||.|||++|||||||||.||++- .+|. -||+
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeee
Confidence 4689999999999999987642 25699999999999999999999999999999999999985 4454 5999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||.|+.++.
T Consensus 167 DfG~Arel~d---------------------------------------------------------------------- 176 (732)
T KOG4250|consen 167 DFGAARELDD---------------------------------------------------------------------- 176 (732)
T ss_pred cccccccCCC----------------------------------------------------------------------
Confidence 9999965542
Q ss_pred CccccccccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHhhCCCCCCCCC----cHHHHHHHhcC----
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGEN----NEKTLINILKK---- 384 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~----~~~~~~~i~~~---- 384 (489)
+....+++||+.|++||++-. ..|+.-+|.|||||++|+++||..||.... +.+....+..+
T Consensus 177 ---------~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 177 ---------NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred ---------CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 224567899999999999985 778999999999999999999999995432 33344444321
Q ss_pred -----------CCC----CCCCCCCCchhHHHHhhHHHHHHHHhhcCccccc
Q 011302 385 -----------PLT----FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 421 (489)
Q Consensus 385 -----------~~~----~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ 421 (489)
++. +|.....+. .....+..++..+|.++|.+|.
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~---~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSR---GLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccH---HHHhhhhHHHHHHHhhhHHHhC
Confidence 111 111111111 1122466889999999999999
No 359
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.1e-39 Score=315.85 Aligned_cols=242 Identities=22% Similarity=0.310 Sum_probs=190.6
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeecCceEEEEEe
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
.||+|+||.||+|++.++. ....+|+|.++.... ......+..|+.++.++ +||||+++++++...+..|+|||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~---~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 76 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDG---LRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 76 (270)
T ss_pred cCCCCCCceEEEEEEcCCC---CeeEEEEEEccccCC--HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEE
Confidence 5899999999999987632 124578888864221 12334566799999999 79999999999999999999999
Q ss_pred ecCCCchHHHHHhCC--------------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 170 YCPGGDLYAARQRQP--------------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
|+++|+|.+++.... ...+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+||
T Consensus 77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCC
Confidence 999999999987532 134788999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|++......
T Consensus 157 gl~~~~~~~----------------------------------------------------------------------- 165 (270)
T cd05047 157 GLSRGQEVY----------------------------------------------------------------------- 165 (270)
T ss_pred CCccccchh-----------------------------------------------------------------------
Confidence 987311000
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 394 (489)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+.+..+.... ..+.. ..
T Consensus 166 --------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~~~~~-~~ 235 (270)
T cd05047 166 --------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RLEKP-LN 235 (270)
T ss_pred --------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC-CCCCC-Cc
Confidence 00001124567999999998889999999999999999996 999998887777666664431 11111 11
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
....+.+|+.+||..||.+||++.
T Consensus 236 ------~~~~~~~li~~~l~~~p~~Rps~~ 259 (270)
T cd05047 236 ------CDDEVYDLMRQCWREKPYERPSFA 259 (270)
T ss_pred ------CCHHHHHHHHHHcccChhhCCCHH
Confidence 112588999999999999999997
No 360
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-39 Score=316.38 Aligned_cols=243 Identities=23% Similarity=0.281 Sum_probs=188.3
Q ss_pred eeccCCceeEEEEEEccCC-------------------CCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 011302 91 RLGSGDIGNVYLCQIRNPM-------------------VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL 151 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~-------------------~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 151 (489)
+||+|+||.||+|...... .......+++|++..... .....+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR---DIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH---HHHHHHHHHHHHHhcCCCCCe
Confidence 6999999999999864211 011234689999876532 233456778899999999999
Q ss_pred ccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC---
Q 011302 152 PTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG--- 228 (489)
Q Consensus 152 v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~--- 228 (489)
+++++++.++...|+||||+++|+|..++... .+.+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999998888653 35789999999999999999999999999999999999998654
Q ss_pred ----cEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCC
Q 011302 229 ----HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDG 304 (489)
Q Consensus 229 ----~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (489)
.+||+|||++.....
T Consensus 158 ~~~~~~kl~d~g~~~~~~~------------------------------------------------------------- 176 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALS------------------------------------------------------------- 176 (274)
T ss_pred CccceeeecCCcccccccc-------------------------------------------------------------
Confidence 489999998622100
Q ss_pred CCCCccccCCccccccccccCCccccCCCCccCcchhcC-CCCCCcccHHHHHHHHHHHh-hCCCCCCCCCcHHHHHHHh
Q 011302 305 DHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINIL 382 (489)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~ 382 (489)
.....|+..|+|||.+.+ ..++.++|||||||++|||+ +|..||.+....+... ..
T Consensus 177 ---------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-~~ 234 (274)
T cd05076 177 ---------------------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER-FY 234 (274)
T ss_pred ---------------------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH-HH
Confidence 011246788999999876 45799999999999999995 7999998776554322 22
Q ss_pred cCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 383 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 383 ~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
......|... ...+.+||.+||+.+|++||++. +++++
T Consensus 235 ~~~~~~~~~~---------~~~~~~li~~cl~~~p~~Rps~~----~il~~ 272 (274)
T cd05076 235 EKKHRLPEPS---------CKELATLISQCLTYEPTQRPSFR----TILRD 272 (274)
T ss_pred HhccCCCCCC---------ChHHHHHHHHHcccChhhCcCHH----HHHHh
Confidence 2222233211 12488999999999999999987 77654
No 361
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.7e-39 Score=316.16 Aligned_cols=257 Identities=17% Similarity=0.206 Sum_probs=202.1
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++|++.+.||+|+||.||+|.+.... ......|++|.+..... ......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~-~~~~~~v~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 79 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEK-PGKEEEVFVKTVKDHAS--EIQVTLLLQESCLLYGLSHQNILPILHVCIE 79 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCC-CCceeEEEEEEccCCCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence 34578999999999999999999987632 12367899998864321 2334567779999999999999999998665
Q ss_pred -CceEEEEEeecCCCchHHHHHhCCC------CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEc
Q 011302 161 -SHYSCLVMEYCPGGDLYAARQRQPG------KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 161 -~~~~~lV~E~~~gg~L~~~l~~~~~------~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
+...++++||+++|+|.+++..... ..+++..+..++.|++.||+|||+++++||||||+|||++.++.+||+
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEEC
Confidence 5788999999999999998876422 458899999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||+++.+......
T Consensus 160 d~g~~~~~~~~~~~------------------------------------------------------------------ 173 (280)
T cd05043 160 DNALSRDLFPMDYH------------------------------------------------------------------ 173 (280)
T ss_pred CCCCcccccCCceE------------------------------------------------------------------
Confidence 99998543210000
Q ss_pred CccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIG 392 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~ 392 (489)
.......++..|+|||++.+..++.++|||||||++||+++ |+.||...+..+....+..+ ..++..
T Consensus 174 ----------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~- 241 (280)
T cd05043 174 ----------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-YRLAQP- 241 (280)
T ss_pred ----------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-CCCCCC-
Confidence 00011235678999999999889999999999999999998 99999888776655554443 222211
Q ss_pred CCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 393 VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 393 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.... ..+.+++.+||..||++||++.
T Consensus 242 ~~~~------~~~~~li~~~l~~~p~~Rps~~ 267 (280)
T cd05043 242 INCP------DELFAVMACCWALDPEERPSFS 267 (280)
T ss_pred CcCC------HHHHHHHHHHcCCChhhCCCHH
Confidence 1111 2489999999999999999987
No 362
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.1e-39 Score=312.22 Aligned_cols=248 Identities=19% Similarity=0.236 Sum_probs=189.7
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee-cCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE-ASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-~~~~~~lV~ 168 (489)
+.||+|+||.||+|.+.... .....+|||.+..... ......+.+|+.+++.++||||+++++++. .++..|+||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~--~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSD--GQKIHCAVKSLNRITD--LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCC--CceEEEEEEecCccCC--HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEE
Confidence 36899999999999976432 2456799998854211 123456677999999999999999999765 556789999
Q ss_pred eecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 169 EYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
||+.+|+|.+++.... ..+++..+..++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++.+......
T Consensus 77 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~- 154 (262)
T cd05058 77 PYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY- 154 (262)
T ss_pred ecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce-
Confidence 9999999999987643 44677788889999999999999999999999999999999999999999998432110000
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
.......
T Consensus 155 -------------------------------------------------------------------------~~~~~~~ 161 (262)
T cd05058 155 -------------------------------------------------------------------------SVHNHTG 161 (262)
T ss_pred -------------------------------------------------------------------------eeccccc
Confidence 0000112
Q ss_pred ccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHH
Q 011302 329 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQD 407 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~ 407 (489)
..+++.|+|||.+.+..++.++|||||||++|||++ |.+||...+..+....+..+... +. .... +..+.+
T Consensus 162 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~------~~~~~~ 233 (262)
T cd05058 162 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL-LQ-PEYC------PDPLYE 233 (262)
T ss_pred CcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC-CC-CCcC------CHHHHH
Confidence 246778999999998889999999999999999999 57778777766665555443211 11 1111 124889
Q ss_pred HHHHHhhcCcccccCCC
Q 011302 408 LISKLLVKNPKKRIGSL 424 (489)
Q Consensus 408 li~~~L~~dP~~R~~~~ 424 (489)
++.+||..+|++||++.
T Consensus 234 li~~cl~~~p~~Rp~~~ 250 (262)
T cd05058 234 VMLSCWHPKPEMRPTFS 250 (262)
T ss_pred HHHHHcCCChhhCCCHH
Confidence 99999999999999997
No 363
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.8e-39 Score=320.01 Aligned_cols=255 Identities=21% Similarity=0.273 Sum_probs=197.8
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..++|+..+.||+|+||.||+|.+..+... ....||+|.+...... .....+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGET-VKIPVAIKILNETTGP--KANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCc-ceeeEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 457899999999999999999998754322 2346899988754322 2233567799999999999999999988754
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
..++|+||+++|+|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.+
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 4689999999999999887642 46889999999999999999999999999999999999999999999999998433
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
.....
T Consensus 160 ~~~~~--------------------------------------------------------------------------- 164 (303)
T cd05110 160 EGDEK--------------------------------------------------------------------------- 164 (303)
T ss_pred cCccc---------------------------------------------------------------------------
Confidence 21000
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||.+........ +......++.... .
T Consensus 165 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~-~----- 236 (303)
T cd05110 165 -EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD-LLEKGERLPQPPI-C----- 236 (303)
T ss_pred -ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHHCCCCCCCCCC-C-----
Confidence 000112245778999999999989999999999999999997 999998876554433 3333222222111 1
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCC
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLK 425 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~ 425 (489)
...+.++|.+||..+|++||++.+
T Consensus 237 -~~~~~~li~~c~~~~p~~Rp~~~~ 260 (303)
T cd05110 237 -TIDVYMVMVKCWMIDADSRPKFKE 260 (303)
T ss_pred -CHHHHHHHHHHcCCChhhCcCHHH
Confidence 124889999999999999999973
No 364
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.3e-39 Score=310.57 Aligned_cols=255 Identities=25% Similarity=0.345 Sum_probs=204.6
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEE
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 165 (489)
+++.+.||.|+||.||+|++..... .....||+|++...... .....+..|+.+++.++|+||+++++++.+.+..|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSG-EKEVEVAVKTLKEDADE--QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCC-CCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeE
Confidence 4577899999999999999886321 23478999999755322 13456777999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCc
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVP 245 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~ 245 (489)
+||||+++++|.+++.......+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||+++......
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 99999999999999876543338999999999999999999999999999999999999999999999999974332100
Q ss_pred cccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccC
Q 011302 246 KLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 325 (489)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (489)
. ..
T Consensus 158 ~-----------------------------------------------------------------------------~~ 160 (258)
T smart00219 158 Y-----------------------------------------------------------------------------YK 160 (258)
T ss_pred c-----------------------------------------------------------------------------cc
Confidence 0 00
Q ss_pred CccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 326 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 326 ~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
.....+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...+.......+......... ... ...
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~ 232 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKP--ENC------PPE 232 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC--CcC------CHH
Confidence 001126789999999988889999999999999999998 89999888777777776654322111 111 225
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
+.+++.+||..||++||++. ++++
T Consensus 233 ~~~~i~~~l~~~p~~Rpt~~----~ll~ 256 (258)
T smart00219 233 IYKLMLQCWAEDPEDRPTFS----ELVE 256 (258)
T ss_pred HHHHHHHHCcCChhhCcCHH----HHHh
Confidence 89999999999999999987 6654
No 365
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.1e-39 Score=315.33 Aligned_cols=248 Identities=22% Similarity=0.314 Sum_probs=194.5
Q ss_pred eeeccCCceeEEEEEEccCC-CCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPM-VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 168 (489)
+.||+|+||.||+|++.... ....++.+|||.+.+... ......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36899999999999987532 112346889998865421 123446777999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhCC-----CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC-----cEEEcccCCC
Q 011302 169 EYCPGGDLYAARQRQP-----GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG-----HIMLSDFDLS 238 (489)
Q Consensus 169 E~~~gg~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~-----~vkl~DFG~a 238 (489)
||+++|+|.+++.... ...+++.++..++.|++.||+|||+++++|+||||+|||++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999999887532 23478899999999999999999999999999999999999887 8999999997
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
..+.....
T Consensus 159 ~~~~~~~~------------------------------------------------------------------------ 166 (269)
T cd05044 159 RDIYKSDY------------------------------------------------------------------------ 166 (269)
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 43211000
Q ss_pred ccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCC-CCCCCCCCCCc
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKP-LTFPRIGVSSS 396 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~ 396 (489)
........++..|+|||.+.+..++.++|||||||++|||++ |..||...+..+....+..+. ...+. .
T Consensus 167 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~-- 237 (269)
T cd05044 167 ----YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPE---N-- 237 (269)
T ss_pred ----cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcc---c--
Confidence 000112245778999999998889999999999999999998 999998887776666554432 11111 1
Q ss_pred hhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 397 KEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 397 ~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+..+.+||.+||..+|.+||++.
T Consensus 238 ----~~~~~~~li~~~l~~~p~~Rp~~~ 261 (269)
T cd05044 238 ----CPDKIYQLMTNCWAQDPSERPTFD 261 (269)
T ss_pred ----chHHHHHHHHHHcCCCcccCCCHH
Confidence 123588999999999999999986
No 366
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.1e-39 Score=311.68 Aligned_cols=248 Identities=18% Similarity=0.246 Sum_probs=186.9
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEee
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEY 170 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 170 (489)
.||+|+||+||+|+..... ....+++|.+...... .....+.+|+.+++.++||||+++++.+.+....|+||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~---~~~~~~~k~~~~~~~~--~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDT---GVARVVVKELKANASS--KEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCC---CcceEEEEEecCCCCh--HHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEec
Confidence 5999999999999865421 2455677777643221 2345677899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhCC--CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcccc
Q 011302 171 CPGGDLYAARQRQP--GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLL 248 (489)
Q Consensus 171 ~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 248 (489)
+++|+|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++.......
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~--- 153 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED--- 153 (268)
T ss_pred CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcch---
Confidence 99999999887642 2346677788999999999999999999999999999999999999999999873210000
Q ss_pred CCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcc
Q 011302 249 RPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKS 328 (489)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (489)
.......
T Consensus 154 -------------------------------------------------------------------------~~~~~~~ 160 (268)
T cd05086 154 -------------------------------------------------------------------------YIETEDD 160 (268)
T ss_pred -------------------------------------------------------------------------hhhcccC
Confidence 0001123
Q ss_pred ccCCCCccCcchhcC-------CCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCC-CCCCCCCCCCchhH
Q 011302 329 FVGTHEYLAPEVISG-------QGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKP-LTFPRIGVSSSKEF 399 (489)
Q Consensus 329 ~~Gt~~y~aPE~l~~-------~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~~ 399 (489)
.+|+..|+|||++.. ..++.++|||||||++|||++ |..||...+..+.+..+..+. ...+......
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 236 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLEL---- 236 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCC----
Confidence 468899999999853 235789999999999999996 678998877777666655432 2221111110
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.....+.+++..|| .+|++||++.
T Consensus 237 ~~~~~~~~l~~~c~-~~P~~Rp~~~ 260 (268)
T cd05086 237 PYSERWYEVLQFCW-LSPEKRATAE 260 (268)
T ss_pred CCcHHHHHHHHHHh-hCcccCCCHH
Confidence 01124788999999 6899999997
No 367
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-40 Score=327.81 Aligned_cols=255 Identities=26% Similarity=0.355 Sum_probs=208.4
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
++..+...+.+.||.|.||.||.|.+....++ ..--||||..+.+... +..+.|..|..+|+.++|||||+|+|++.
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kg-e~iaVAvKtCK~d~t~--d~tekflqEa~iMrnfdHphIikLIGv~~ 461 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKG-ERIAVAVKTCKTDCTP--DDTEKFLQEASIMRNFDHPHIIKLIGVCV 461 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccC-cceeeeeehhccCCCh--hhHHHHHHHHHHHHhCCCcchhheeeeee
Confidence 34456667788999999999999999876443 4556899998764333 23567888999999999999999999988
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
+ ...+||||+++-|.|..+++.+. ..|+......|+.||+.||.|||+.++|||||..+|||+.....|||+|||+++
T Consensus 462 e-~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 462 E-QPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred c-cceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhh
Confidence 6 56899999999999999999875 568888899999999999999999999999999999999999999999999997
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.+....-. +
T Consensus 540 ~~ed~~yY--------------k--------------------------------------------------------- 548 (974)
T KOG4257|consen 540 YLEDDAYY--------------K--------------------------------------------------------- 548 (974)
T ss_pred hccccchh--------------h---------------------------------------------------------
Confidence 65431100 0
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchh
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKE 398 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 398 (489)
.....-...|||||.++...++.++|||.|||++||++. |..||.|-.+.+++-.|.++.. .|.... ++
T Consensus 549 ------aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR-lP~P~n-CP-- 618 (974)
T KOG4257|consen 549 ------ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER-LPCPPN-CP-- 618 (974)
T ss_pred ------ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC-CCCCCC-CC--
Confidence 001123457999999999999999999999999999995 9999999998888877766542 222211 11
Q ss_pred HHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 399 FEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 399 ~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+.+..|+.+||+++|.+||.+.
T Consensus 619 ----p~LYslmskcWayeP~kRPrft 640 (974)
T KOG4257|consen 619 ----PALYSLMSKCWAYEPSKRPRFT 640 (974)
T ss_pred ----hHHHHHHHHHhccCcccCCcHH
Confidence 2478999999999999999985
No 368
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.7e-39 Score=310.60 Aligned_cols=241 Identities=23% Similarity=0.254 Sum_probs=188.8
Q ss_pred eeeccCCceeEEEEEEccCCC-----CCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMV-----GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+.||+|+||.||+|.+..... ......+++|++...... ...+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD----SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh----HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 368999999999999986431 122346788887654322 4566779999999999999999999888 778
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC-------cEEEcccCC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG-------HIMLSDFDL 237 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~-------~vkl~DFG~ 237 (489)
|+||||+++|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 99999999999999988753 3689999999999999999999999999999999999999888 799999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
+.....
T Consensus 155 a~~~~~-------------------------------------------------------------------------- 160 (259)
T cd05037 155 PITVLS-------------------------------------------------------------------------- 160 (259)
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 732210
Q ss_pred cccccccCCccccCCCCccCcchhcCC--CCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCC
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQ--GHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVS 394 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 394 (489)
.....++..|+|||++.+. .++.++|||||||++|||++ |..||...+......... .....+....
T Consensus 161 --------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~- 230 (259)
T cd05037 161 --------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLPMPDC- 230 (259)
T ss_pred --------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCCCCCc-
Confidence 0112466789999999877 68999999999999999999 688887765443332222 1111121111
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHc
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
..+.+||.+||..+|++||++. ++++
T Consensus 231 --------~~~~~li~~~l~~~p~~Rpt~~----~il~ 256 (259)
T cd05037 231 --------AELANLINQCWTYDPTKRPSFR----AILR 256 (259)
T ss_pred --------hHHHHHHHHHhccChhhCCCHH----HHHH
Confidence 2588999999999999999987 6654
No 369
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.2e-39 Score=315.38 Aligned_cols=258 Identities=17% Similarity=0.174 Sum_probs=183.8
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHH--HHHHH------HHHHHHHHHHHHHhCCCCCcc
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA--LAIRK------KLHRADMEKVILTMLDHPFLP 152 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~--~~~~~------~~~~~~~E~~~l~~l~hpnIv 152 (489)
+..++|++.+.||+|+||+||+|.+.+... ....+|+|+..... ..... .......+...+..++|+||+
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~--~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~ 86 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHC--INNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP 86 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcc--cccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence 344789999999999999999999876311 24566777643211 10000 001122233445567899999
Q ss_pred cccceeecCc----eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC
Q 011302 153 TLYAEFEASH----YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG 228 (489)
Q Consensus 153 ~l~~~~~~~~----~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~ 228 (489)
++++++.... ..|++||++ ..++.+++... ..+++..++.++.|++.||+|||+++|+||||||+|||++.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 87 KYYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN 163 (294)
T ss_pred cEEEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 9998765443 457889988 55777766553 3467888999999999999999999999999999999999999
Q ss_pred cEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCC
Q 011302 229 HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHD 308 (489)
Q Consensus 229 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (489)
.++|+|||+|+.+.......
T Consensus 164 ~~~l~DFGla~~~~~~~~~~------------------------------------------------------------ 183 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHI------------------------------------------------------------ 183 (294)
T ss_pred cEEEEEcCCceeeccCCccc------------------------------------------------------------
Confidence 99999999985432100000
Q ss_pred ccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH-HH--------HH
Q 011302 309 QELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE-KT--------LI 379 (489)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~--------~~ 379 (489)
...........||+.|+|||++.+..++.++|||||||++|||++|..||.+.... .. +.
T Consensus 184 -----------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~ 252 (294)
T PHA02882 184 -----------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIK 252 (294)
T ss_pred -----------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHH
Confidence 00001112346999999999999999999999999999999999999999877432 21 22
Q ss_pred HHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 380 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 380 ~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
++..+....+. . +..+.+++..|+..+|++||+..
T Consensus 253 ~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~rp~~~ 287 (294)
T PHA02882 253 RLHEGKIKIKN----A------NKFIYDFIECVTKLSYEEKPDYD 287 (294)
T ss_pred HhhhhhhccCC----C------CHHHHHHHHHHHhCCCCCCCCHH
Confidence 22222222221 1 12488999999999999999986
No 370
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-40 Score=337.28 Aligned_cols=261 Identities=29% Similarity=0.460 Sum_probs=216.0
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCccccccee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEF 158 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~ 158 (489)
....+-|.+...||.|.+|.||+++.+. .++..|+|+...... .-+++..|.++|+.+ +|||++.++++|
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~-----~~~~aa~kI~~~~~d----~deEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVK-----TGQLAAIKIMDPTED----EEEEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeee-----cCceeeeEeecCCcc----ccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3456789999999999999999999887 567788888764421 123455578888876 699999999998
Q ss_pred e-----cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEc
Q 011302 159 E-----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 159 ~-----~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
. .++.++||||||.||+.-|+++...+.++.|..+..|++.++.||.+||.+.+||||||-.|||++.+|.|||+
T Consensus 86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred EEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEe
Confidence 4 56789999999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||++..++.
T Consensus 166 DFGvSaQlds---------------------------------------------------------------------- 175 (953)
T KOG0587|consen 166 DFGVSAQLDS---------------------------------------------------------------------- 175 (953)
T ss_pred eeeeeeeeec----------------------------------------------------------------------
Confidence 9999733210
Q ss_pred CccccccccccCCccccCCCCccCcchhcCC-----CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISGQ-----GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 388 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~ 388 (489)
.-.+..+++|||.|||||++... .|+..+|+||||++..||--|.+|+-+.-+...+..|-+.+.
T Consensus 176 --------T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPP-- 245 (953)
T KOG0587|consen 176 --------TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP-- 245 (953)
T ss_pred --------ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCC--
Confidence 01356678999999999999754 368899999999999999999999988887777666655432
Q ss_pred CCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcC
Q 011302 389 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 389 p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
......+.|. .++.+||..||.+|-++||+.. ++++|||..
T Consensus 246 --PkLkrp~kWs--~~FndFIs~cL~Kd~e~RP~~~----~ll~hpFi~ 286 (953)
T KOG0587|consen 246 --PKLKRPKKWS--KKFNDFISTCLVKDYEQRPSTE----ELLKHPFIT 286 (953)
T ss_pred --ccccchhhHH--HHHHHHHHHHHhhccccCcchh----hhccCCccc
Confidence 1112222222 3578999999999999999998 999999996
No 371
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.6e-39 Score=307.21 Aligned_cols=246 Identities=24% Similarity=0.322 Sum_probs=195.5
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEe
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 169 (489)
++||+|+||.||+|.+.. ++.||+|.+...... .....+..|+.+++.++||||+++++++.+....|+|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~------~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 72 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG------NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVME 72 (251)
T ss_pred CccccCCCceEEEEEEeC------CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEE
Confidence 469999999999999764 467899988754332 234567779999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
|++|++|.+++.... ..+++..+..++.|++.||+|||+++++||||||+|||++.++.+||+|||++........
T Consensus 73 ~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~--- 148 (251)
T cd05041 73 LVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY--- 148 (251)
T ss_pred cCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc---
Confidence 999999999886643 4688899999999999999999999999999999999999999999999999743210000
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
.......
T Consensus 149 -------------------------------------------------------------------------~~~~~~~ 155 (251)
T cd05041 149 -------------------------------------------------------------------------TVSDGLK 155 (251)
T ss_pred -------------------------------------------------------------------------eeccccC
Confidence 0000111
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDL 408 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~l 408 (489)
.++..|+|||.+.+..++.++|||||||++|||++ |..||.+.........+.... ..+... . ...++.+|
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~~~~~-~------~~~~~~~l 227 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RMPAPQ-L------CPEEIYRL 227 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CCCCCc-c------CCHHHHHH
Confidence 24567999999998889999999999999999998 899998887666555554331 111111 1 11258999
Q ss_pred HHHHhhcCcccccCCCCChHHHHc
Q 011302 409 ISKLLVKNPKKRIGSLKGSVEIKR 432 (489)
Q Consensus 409 i~~~L~~dP~~R~~~~~~~~~ll~ 432 (489)
|.+||..+|.+||++. ++++
T Consensus 228 i~~~l~~~p~~Rp~~~----ell~ 247 (251)
T cd05041 228 MLQCWAYDPENRPSFS----EIYN 247 (251)
T ss_pred HHHHhccChhhCcCHH----HHHH
Confidence 9999999999999987 6654
No 372
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=9.3e-39 Score=311.63 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=191.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee--cC
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE--AS 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~--~~ 161 (489)
.+|++++.||+|+||.||+|...... ...+..||+|.+..... .....+.+|+.+++.++||||+++++++. +.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQ-DNTGEVVAVKKLQHSTA---EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCc-CCCCcEEEEEEeccCCH---HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 57999999999999999999864211 12567899999865432 23456778999999999999999999764 34
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
..+|+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++..+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 57899999999999999987642 46899999999999999999999999999999999999999999999999998433
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
.......
T Consensus 159 ~~~~~~~------------------------------------------------------------------------- 165 (284)
T cd05081 159 PQDKEYY------------------------------------------------------------------------- 165 (284)
T ss_pred cCCCcce-------------------------------------------------------------------------
Confidence 2100000
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH---------------HHHHHHhcCCC
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE---------------KTLINILKKPL 386 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---------------~~~~~i~~~~~ 386 (489)
.......++..|+|||++.+..++.++|||||||++|||++|..|+...... ..+.++.....
T Consensus 166 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05081 166 --KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNG 243 (284)
T ss_pred --eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCC
Confidence 0000112445699999999888999999999999999999988776433211 01111222222
Q ss_pred CCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 387 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 387 ~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.++... .....+.+||.+||..+|++||++.
T Consensus 244 ~~~~~~-------~~~~~~~~li~~cl~~~p~~Rpt~~ 274 (284)
T cd05081 244 RLPAPP-------GCPAEIYAIMKECWNNDPSQRPSFS 274 (284)
T ss_pred cCCCCC-------CCCHHHHHHHHHHccCChhhCCCHH
Confidence 222111 1123589999999999999999997
No 373
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=9e-41 Score=309.54 Aligned_cols=274 Identities=27% Similarity=0.381 Sum_probs=215.7
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC-
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS- 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~- 161 (489)
..+|..++.+|.|.- .|..|.+.- .++.||+|.+... ........++.+|..++..+.|+||++++.+|.-.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v-----~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~ 88 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQV-----LGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQK 88 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhh-----ccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCccc
Confidence 357888899999988 777776653 5788999988766 33345567788999999999999999999999533
Q ss_pred -----ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 162 -----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 162 -----~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
..+|+||||| .++|...+.. .++-..+..++.|++.|++|||+.||+||||||+||++..++.+||.|||
T Consensus 89 ~l~~~~e~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 89 TLEEFQEVYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred cHHHHHhHHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccch
Confidence 4689999999 7899888763 47888999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+|+....
T Consensus 164 ~ar~e~~------------------------------------------------------------------------- 170 (369)
T KOG0665|consen 164 LARTEDT------------------------------------------------------------------------- 170 (369)
T ss_pred hhcccCc-------------------------------------------------------------------------
Confidence 9843211
Q ss_pred ccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcC------------
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK------------ 384 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~------------ 384 (489)
.-+.+.++.|..|+|||++.+..|...+||||+||++.||++|...|.|.+..+.+.++...
T Consensus 171 ------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 171 ------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred ------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 01345568999999999999999999999999999999999999999998877666665321
Q ss_pred -------------------CCCCCCCCCCCchhH--HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccc
Q 011302 385 -------------------PLTFPRIGVSSSKEF--EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWAL 443 (489)
Q Consensus 385 -------------------~~~~p~~~~~~~~~~--~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~ 443 (489)
.-.+|+.......+. .....++||+.+||..||++|.++. ++|+||||+ -|-.
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~----daL~HPY~~--vw~~ 318 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVD----DALRHPYIK--VWYD 318 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHH----HHhcCCeee--eecc
Confidence 001122111111111 1223589999999999999999997 999999999 5744
Q ss_pred cccCCCCCCC
Q 011302 444 IRSIKPPEVP 453 (489)
Q Consensus 444 ~~~~~~p~~~ 453 (489)
-..+..|.++
T Consensus 319 ~~ev~ap~pe 328 (369)
T KOG0665|consen 319 PDEVEAPPPE 328 (369)
T ss_pred cccccCCCCc
Confidence 4444444433
No 374
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=2.9e-40 Score=322.37 Aligned_cols=266 Identities=25% Similarity=0.371 Sum_probs=212.2
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC------CCCcc
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD------HPFLP 152 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv 152 (489)
+++--.+|.+....|+|-||+|.+|.+.. .+..||||+|.....-.. .-..|+++|++|+ --|++
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~-----r~~~vAiKIIRnNE~M~K----tGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQA-----RGQEVAIKIIRNNEVMHK----TGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccC-----CCCeeEEEEeecchHHhh----hhhHHHHHHHHhhccCchhhhHHH
Confidence 34556889999999999999999999887 456899999986543322 3345999999995 34899
Q ss_pred cccceeecCceEEEEEeecCCCchHHHHHhCC-CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC-CcE
Q 011302 153 TLYAEFEASHYSCLVMEYCPGGDLYAARQRQP-GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED-GHI 230 (489)
Q Consensus 153 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~-~~v 230 (489)
+|+-.|...+++|||+|-+ ..+|.++|++.. .-.|....++.|+.|+..||..|-..||+|.||||+|||+++. ..+
T Consensus 498 rl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred HHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCccee
Confidence 9999999999999999999 789999998753 2458889999999999999999999999999999999999965 568
Q ss_pred EEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCcc
Q 011302 231 MLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQE 310 (489)
Q Consensus 231 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (489)
||||||.|-....
T Consensus 577 KLCDfGSA~~~~e------------------------------------------------------------------- 589 (752)
T KOG0670|consen 577 KLCDFGSASFASE------------------------------------------------------------------- 589 (752)
T ss_pred eeccCcccccccc-------------------------------------------------------------------
Confidence 9999998722110
Q ss_pred ccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCC
Q 011302 311 LLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 390 (489)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~ 390 (489)
...+.+.-+..|.|||+|.|.+|+...|+||+||+||||+||+..|.|.++.+++.-.+...-.||.
T Consensus 590 -------------neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~ 656 (752)
T KOG0670|consen 590 -------------NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPN 656 (752)
T ss_pred -------------ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcH
Confidence 0112223456899999999999999999999999999999999999999888776544332222221
Q ss_pred CC---------------------------------------------------CCCchhHHHHhhHHHHHHHHhhcCccc
Q 011302 391 IG---------------------------------------------------VSSSKEFEEVVKLQDLISKLLVKNPKK 419 (489)
Q Consensus 391 ~~---------------------------------------------------~~~~~~~~~~~~l~~li~~~L~~dP~~ 419 (489)
.. ...........++++||.+||..||++
T Consensus 657 KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~K 736 (752)
T KOG0670|consen 657 KMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEK 736 (752)
T ss_pred HHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhh
Confidence 10 011112234457899999999999999
Q ss_pred ccCCCCChHHHHcCCCcCC
Q 011302 420 RIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 420 R~~~~~~~~~ll~hp~f~~ 438 (489)
|++.. ++|+||||.+
T Consensus 737 Rit~n----qAL~HpFi~~ 751 (752)
T KOG0670|consen 737 RITVN----QALKHPFITE 751 (752)
T ss_pred cCCHH----HHhcCCcccC
Confidence 99998 9999999975
No 375
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=317.93 Aligned_cols=268 Identities=29% Similarity=0.404 Sum_probs=213.8
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeee--hH--HHHHHHHHHHHHHHHHHHHhCCCCCcccccce
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD--RE--ALAIRKKLHRADMEKVILTMLDHPFLPTLYAE 157 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~--~~--~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 157 (489)
-.++|.++.+||+|||++||+|.+.. .+++||+|+-. +. .....+....+.+|..|.+.|+||.||++|++
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~-----EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDy 535 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLT-----EQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDY 535 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccc-----hhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeee
Confidence 35789999999999999999999876 57899999863 22 12234456668899999999999999999999
Q ss_pred ee-cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCC--CeeecCCCCCeEecc---CCcEE
Q 011302 158 FE-ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMG--IVYRDLKPENVLVRE---DGHIM 231 (489)
Q Consensus 158 ~~-~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDIKp~NILl~~---~~~vk 231 (489)
|. +...+|-|+|||+|.+|.-+++.+ +.+++.+++.|+.||+.||.||.+.. |||-||||.||||-. -|.+|
T Consensus 536 fslDtdsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIK 613 (775)
T KOG1151|consen 536 FSLDTDSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIK 613 (775)
T ss_pred eeeccccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeE
Confidence 96 667899999999999998888876 67999999999999999999999875 999999999999953 47899
Q ss_pred EcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccc
Q 011302 232 LSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQEL 311 (489)
Q Consensus 232 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (489)
|+|||+++.++.....
T Consensus 614 ITDFGLSKIMdddSy~---------------------------------------------------------------- 629 (775)
T KOG1151|consen 614 ITDFGLSKIMDDDSYN---------------------------------------------------------------- 629 (775)
T ss_pred eeecchhhhccCCccC----------------------------------------------------------------
Confidence 9999998665421100
Q ss_pred cCCccccccccccCCccccCCCCccCcchhcCC----CCCCcccHHHHHHHHHHHhhCCCCCCCCCcH-HHHHH--Hh-c
Q 011302 312 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ----GHGSAVDWWTLGVFLYEMLYGTTPFKGENNE-KTLIN--IL-K 383 (489)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~----~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~--i~-~ 383 (489)
....-..+....||.+|++||.+.-. ..+.++||||+|||+|++++|+.||...-.. +++.. |+ .
T Consensus 630 -------~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkA 702 (775)
T KOG1151|consen 630 -------SVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKA 702 (775)
T ss_pred -------cccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcc
Confidence 00011234566899999999997532 3588999999999999999999999765433 33222 22 3
Q ss_pred CCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 384 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 384 ~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
..+.||.....++ ++++||++||++--++|.... +|..||||..
T Consensus 703 tEVqFP~KPvVss-------eAkaFIRRCLaYRKeDR~DV~----qLA~dpyllP 746 (775)
T KOG1151|consen 703 TEVQFPPKPVVSS-------EAKAFIRRCLAYRKEDRIDVQ----QLACDPYLLP 746 (775)
T ss_pred eeccCCCCCccCH-------HHHHHHHHHHHhhhhhhhhHH----HHccCccccc
Confidence 5567776655544 489999999999999999876 9999999965
No 376
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=321.78 Aligned_cols=255 Identities=21% Similarity=0.264 Sum_probs=206.8
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
+++.+...+.++||+|.||+|.+|...+ ...||+|.++.+... +....|..|+.+|.+|.|||||.|+++|.
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg------~lkVAVK~Lr~~a~~--~~r~~F~kEIkiLsqLkhPNIveLvGVC~ 605 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEG------PLKVAVKILRPDATK--NARNDFLKEIKILSRLKHPNIVELLGVCV 605 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecC------ceEEEEeecCcccch--hHHHHHHHHHHHHhccCCCCeeEEEeeee
Confidence 4555778899999999999999999775 468999999877544 34567888999999999999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
.++.+|+||||++.|+|.+++..+....+.......|+.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++
T Consensus 606 ~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 606 QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccc
Confidence 99999999999999999999988743334555667799999999999999999999999999999999999999999985
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.+.-.+-
T Consensus 686 ~lysg~y------------------------------------------------------------------------- 692 (807)
T KOG1094|consen 686 NLYSGDY------------------------------------------------------------------------- 692 (807)
T ss_pred ccccCCc-------------------------------------------------------------------------
Confidence 4321100
Q ss_pred cccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHh--hCCCCCCCCCcHHHHHHHhc---C--CCCCCCCC
Q 011302 320 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEML--YGTTPFKGENNEKTLINILK---K--PLTFPRIG 392 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ell--tG~~Pf~~~~~~~~~~~i~~---~--~~~~p~~~ 392 (489)
.+.-+..+-...|||||.|...++++++|+|+|||++||++ +.+.||......+..++... . ....+...
T Consensus 693 ---y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P 769 (807)
T KOG1094|consen 693 ---YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRP 769 (807)
T ss_pred ---eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCC
Confidence 11112335567899999999999999999999999999987 58999998888777665532 1 11122222
Q ss_pred CCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 393 VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 393 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..+.. .+.+||.+||.++-++||+++
T Consensus 770 ~~cp~------~lyelml~Cw~~es~~RPsFe 795 (807)
T KOG1094|consen 770 PACPQ------GLYELMLRCWRRESEQRPSFE 795 (807)
T ss_pred CcCcH------HHHHHHHHHhchhhhcCCCHH
Confidence 22222 477999999999999999986
No 377
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8.8e-39 Score=309.17 Aligned_cols=250 Identities=27% Similarity=0.393 Sum_probs=199.2
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHH-------HHHHHHHHHHHHHHHHHh-CCCCCcccccc
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL-------AIRKKLHRADMEKVILTM-LDHPFLPTLYA 156 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~ 156 (489)
+|++.+.||+|+||.||+|.+... +++.+|+|.+..... .......++..|..++.. ++||||+++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~ 76 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNN----GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYK 76 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCC----CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEe
Confidence 478889999999999999998762 457899998864321 112334556678887765 79999999999
Q ss_pred eeecCceEEEEEeecCCCchHHHHHh--CCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEc
Q 011302 157 EFEASHYSCLVMEYCPGGDLYAARQR--QPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
++..++..|+||||++|++|.+++.. .....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+
T Consensus 77 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~ 156 (269)
T cd08528 77 TFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTIT 156 (269)
T ss_pred eEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEe
Confidence 99999999999999999999988753 223568999999999999999999996 789999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||++......
T Consensus 157 dfg~~~~~~~~--------------------------------------------------------------------- 167 (269)
T cd08528 157 DFGLAKQKQPE--------------------------------------------------------------------- 167 (269)
T ss_pred cccceeecccc---------------------------------------------------------------------
Confidence 99997332110
Q ss_pred CccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGV 393 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~ 393 (489)
.......|+..|+|||.+.+..++.++|||||||++|||++|..||...+.......+...........
T Consensus 168 ----------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~- 236 (269)
T cd08528 168 ----------SKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEG- 236 (269)
T ss_pred ----------cccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcc-
Confidence 011234588899999999988899999999999999999999999987776666666655433211110
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
. ....+.+||.+||..||++||++.
T Consensus 237 ~------~~~~l~~li~~cl~~~p~~Rp~~~ 261 (269)
T cd08528 237 M------YSEDVTDVITSCLTPDAEARPDII 261 (269)
T ss_pred c------CCHHHHHHHHHHCCCCCccCCCHH
Confidence 1 113589999999999999999987
No 378
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=7.9e-39 Score=310.07 Aligned_cols=251 Identities=21% Similarity=0.279 Sum_probs=195.0
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc---
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH--- 162 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--- 162 (489)
|.+.+.||+|+||.||+|.++... .+++.||||++..+... .....++.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~--~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSED--GSFQKVAVKMLKADIFS-SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG 77 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccC--CCceEEEEEEeccccCC-hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC
Confidence 567889999999999999876421 24688999998754322 223456778999999999999999999886432
Q ss_pred ---eEEEEEeecCCCchHHHHHhCC----CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEccc
Q 011302 163 ---YSCLVMEYCPGGDLYAARQRQP----GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 163 ---~~~lV~E~~~gg~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
..++++||+.+|+|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 78 RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcc
Confidence 3478999999999988764321 125788889999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+++.......
T Consensus 158 g~~~~~~~~~~--------------------------------------------------------------------- 168 (273)
T cd05074 158 GLSKKIYSGDY--------------------------------------------------------------------- 168 (273)
T ss_pred cccccccCCcc---------------------------------------------------------------------
Confidence 99843211000
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCC-CCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPL-TFPRIGV 393 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~ 393 (489)
........+++.|++||.+.+..++.++|||||||++|||++ |.+||.+.+..+....+..... ..+.
T Consensus 169 -------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--- 238 (273)
T cd05074 169 -------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPP--- 238 (273)
T ss_pred -------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCC---
Confidence 000112245678999999998889999999999999999999 9999988877666666554321 1111
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
. ....+.+|+.+||..+|++||++.
T Consensus 239 ~------~~~~~~~l~~~~l~~~p~~Rps~~ 263 (273)
T cd05074 239 D------CLEDVYELMCQCWSPEPKCRPSFQ 263 (273)
T ss_pred C------CCHHHHHHHHHHcCCChhhCcCHH
Confidence 1 112589999999999999999987
No 379
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=330.53 Aligned_cols=256 Identities=23% Similarity=0.307 Sum_probs=212.0
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
+..++..+.++||+|.||.|++|.|.... .+...||||+++.+.... ....|.+|+.+|.+|+|||+|+|||+..+
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~ps--gk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~ 182 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPS--GKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD 182 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCC--CcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc
Confidence 34567788899999999999999999743 256688999998765542 56788899999999999999999999888
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
..+.||||+++.|+|.+.|++.....|-......|+.||+.||.||.++++|||||..+|+||-....|||+|||+.+.
T Consensus 183 -qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRa 261 (1039)
T KOG0199|consen 183 -QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRA 261 (1039)
T ss_pred -chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceec
Confidence 7889999999999999999886667788888999999999999999999999999999999999999999999999865
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+...+...
T Consensus 262 Lg~ned~Y------------------------------------------------------------------------ 269 (1039)
T KOG0199|consen 262 LGENEDMY------------------------------------------------------------------------ 269 (1039)
T ss_pred cCCCCcce------------------------------------------------------------------------
Confidence 43211110
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
.......-...|.|||.|....++.++|||+|||+||||++ |+.||.|....+++.+|-.+. .++... .+..
T Consensus 270 ---vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e-rLpRPk-~cse-- 342 (1039)
T KOG0199|consen 270 ---VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE-RLPRPK-YCSE-- 342 (1039)
T ss_pred ---EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc-cCCCCC-CChH--
Confidence 00111123457999999999999999999999999999996 999999999999998887443 233221 2222
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+.+++..||..+|++||++.
T Consensus 343 ----dIY~imk~cWah~paDRptFs 363 (1039)
T KOG0199|consen 343 ----DIYQIMKNCWAHNPADRPTFS 363 (1039)
T ss_pred ----HHHHHHHHhccCCccccccHH
Confidence 489999999999999999985
No 380
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=320.95 Aligned_cols=253 Identities=20% Similarity=0.257 Sum_probs=209.0
Q ss_pred hcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccc
Q 011302 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYA 156 (489)
Q Consensus 77 ~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 156 (489)
..|++...+..+..+||-|.||.||.|.|+. -...||||.++.+.+. +++|..|..+|+.+.|||+|+|++
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKk-----yslTvAVKtLKEDtMe----veEFLkEAAvMKeikHpNLVqLLG 330 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 330 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeec-----cceeeehhhhhhcchh----HHHHHHHHHHHHhhcCccHHHHhh
Confidence 4456666788889999999999999999997 4678899999887654 567777999999999999999999
Q ss_pred eeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccC
Q 011302 157 EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG 236 (489)
+|..+..+|||+|||..|+|.++|+......++.-....|+.||..||+||..+++|||||..+|+|+.++..||++|||
T Consensus 331 VCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFG 410 (1157)
T KOG4278|consen 331 VCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFG 410 (1157)
T ss_pred hhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccc
Confidence 99999999999999999999999998766667777778889999999999999999999999999999999999999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+++.+... +...+
T Consensus 411 LsRlMtgD-------------------------------------------------------------TYTAH------ 423 (1157)
T KOG4278|consen 411 LSRLMTGD-------------------------------------------------------------TYTAH------ 423 (1157)
T ss_pred hhhhhcCC-------------------------------------------------------------ceecc------
Confidence 99654310 00000
Q ss_pred ccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCC-CCCC
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPR-IGVS 394 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~-~~~~ 394 (489)
.+..-...|.|||-|....++.++|||+|||+|||+.| |-.||.|.+-.+++.-+.+ .+.... .+++
T Consensus 424 ----------AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEk-gyRM~~PeGCP 492 (1157)
T KOG4278|consen 424 ----------AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEK-GYRMDGPEGCP 492 (1157)
T ss_pred ----------cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhc-cccccCCCCCC
Confidence 00012357999999999999999999999999999996 9999999987766654443 333222 2222
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+.+.+||+.||+|+|.+||++.
T Consensus 493 --------pkVYeLMraCW~WsPsDRPsFa 514 (1157)
T KOG4278|consen 493 --------PKVYELMRACWNWSPSDRPSFA 514 (1157)
T ss_pred --------HHHHHHHHHHhcCCcccCccHH
Confidence 1478999999999999999986
No 381
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.7e-38 Score=309.25 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=198.3
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec--C
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA--S 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~ 161 (489)
.+|++.+.||+|+||.||+|++.... ...+..||+|++...... .....+..|+.+++.++||||+++++++.. .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLG-DNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCC-CCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 57889999999999999999976422 125788999999765433 345567889999999999999999998877 6
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
...|+||||+++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++...
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 68999999999999999987653 35899999999999999999999999999999999999999999999999998433
Q ss_pred ccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccc
Q 011302 242 DVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEP 321 (489)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
......
T Consensus 160 ~~~~~~-------------------------------------------------------------------------- 165 (284)
T cd05038 160 PEDKDY-------------------------------------------------------------------------- 165 (284)
T ss_pred ccCCcc--------------------------------------------------------------------------
Confidence 210000
Q ss_pred cccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH--------------HHHHHHhcCCCC
Q 011302 322 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE--------------KTLINILKKPLT 387 (489)
Q Consensus 322 ~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--------------~~~~~i~~~~~~ 387 (489)
........++..|+|||.+.+..++.++|||||||++|||++|..||...... ..+..+......
T Consensus 166 -~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd05038 166 -YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGER 244 (284)
T ss_pred -eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCc
Confidence 00001123456799999999888999999999999999999999998654321 122223333222
Q ss_pred CCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 388 FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 388 ~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.+.... ....+.+|+.+||..+|++||++.
T Consensus 245 ~~~~~~-------~~~~~~~li~~cl~~~p~~Rpt~~ 274 (284)
T cd05038 245 LPRPPS-------CPDEVYDLMKLCWEAEPQDRPSFA 274 (284)
T ss_pred CCCCcc-------CCHHHHHHHHHHhccChhhCCCHH
Confidence 222111 113588999999999999999997
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=8.4e-39 Score=337.87 Aligned_cols=274 Identities=20% Similarity=0.195 Sum_probs=181.7
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccce-
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAE- 157 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~- 157 (489)
.....++|.+.+.||+|+||.||+|++..+.. ..+..||+|.+...... +....| .+....+.++..++..
T Consensus 127 ~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~-~~~~~vAvK~~~~~~~~-----e~~~~e--~l~~~~~~~~~~~~~~~ 198 (566)
T PLN03225 127 PSFKKDDFVLGKKLGEGAFGVVYKASLVNKQS-KKEGKYVLKKATEYGAV-----EIWMNE--RVRRACPNSCADFVYGF 198 (566)
T ss_pred CCCccCCeEEeEEEeeCCCeEEEEEEEcCCcc-ccCcEEEEEEecccchh-----HHHHHH--HHHhhchhhHHHHHHhh
Confidence 34567899999999999999999999986321 23678999988643211 001111 1122223333333322
Q ss_pred -----eecCceEEEEEeecCCCchHHHHHhCCC------------------CCCChhhHHHHHHHHHHHHHHHHhCCCee
Q 011302 158 -----FEASHYSCLVMEYCPGGDLYAARQRQPG------------------KRFGISSAKFYAAETLLALEYLHMMGIVY 214 (489)
Q Consensus 158 -----~~~~~~~~lV~E~~~gg~L~~~l~~~~~------------------~~l~~~~~~~i~~qi~~~L~yLH~~~iiH 214 (489)
...+..++|||||+.+++|.+++..... .......+..|+.||+.||+|||++||||
T Consensus 199 ~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiH 278 (566)
T PLN03225 199 LEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVH 278 (566)
T ss_pred hcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 2456789999999999999998865321 01123346679999999999999999999
Q ss_pred ecCCCCCeEecc-CCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccc
Q 011302 215 RDLKPENVLVRE-DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 293 (489)
Q Consensus 215 rDIKp~NILl~~-~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (489)
|||||+|||++. ++.+||+|||+|+.+....
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~------------------------------------------------ 310 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI------------------------------------------------ 310 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCcccccccc------------------------------------------------
Confidence 999999999985 6899999999984321100
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCC----------------------CCCCccc
Q 011302 294 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQ----------------------GHGSAVD 351 (489)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~----------------------~~~~~~D 351 (489)
+.....++||+.|||||.+... .++.++|
T Consensus 311 -----------------------------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 311 -----------------------------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred -----------------------------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 0112345789999999976432 2345679
Q ss_pred HHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhc-CCCCC-------CCCCCCC-chhHH----HHhhHHHHHHHHhhcCcc
Q 011302 352 WWTLGVFLYEMLYGTTPFKGENNEKTLINILK-KPLTF-------PRIGVSS-SKEFE----EVVKLQDLISKLLVKNPK 418 (489)
Q Consensus 352 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~-~~~~~-------p~~~~~~-~~~~~----~~~~l~~li~~~L~~dP~ 418 (489)
||||||+||||+++..++. +....+..++. ....+ +...... ...++ ......+||.+||+.||+
T Consensus 362 VwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred cHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 9999999999999776653 22222222221 11100 0000000 00000 111355899999999999
Q ss_pred cccCCCCChHHHHcCCCcCCCCccc
Q 011302 419 KRIGSLKGSVEIKRHEFFKGINWAL 443 (489)
Q Consensus 419 ~R~~~~~~~~~ll~hp~f~~~~~~~ 443 (489)
+||++. ++|+||||++.++..
T Consensus 440 kR~ta~----e~L~Hpff~~~~~~~ 460 (566)
T PLN03225 440 QRISAK----AALAHPYFDREGLLG 460 (566)
T ss_pred cCCCHH----HHhCCcCcCCCCccc
Confidence 999998 999999999988753
No 383
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=302.54 Aligned_cols=135 Identities=27% Similarity=0.391 Sum_probs=117.9
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-----C---CCcccc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-----H---PFLPTL 154 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---pnIv~l 154 (489)
..+|.++++||-|.|++||+|.+.. ..++||+|+++..... .+..+.|+.+|++++ | .+||+|
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq-----~~r~VAlKVvKSAqhY----tEaAlDEIklL~~v~~~Dp~~~~~~~VV~L 147 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQ-----NKRYVALKVVKSAQHY----TEAALDEIKLLQQVREGDPNDPGKKCVVQL 147 (590)
T ss_pred CceEEEEEeccccccceeEEEeecc-----CCeEEEEEEEehhhHH----HHHHHHHHHHHHHHHhcCCCCCCCceeeee
Confidence 4899999999999999999999997 6789999999866433 334556899998873 3 369999
Q ss_pred cceee----cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccC
Q 011302 155 YAEFE----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVRED 227 (489)
Q Consensus 155 ~~~~~----~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~ 227 (489)
++.|. ++.++|||+|++ |.+|..++.+...+.++...++.|++||+.||.|||. .||||.||||+|||+..+
T Consensus 148 lD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 148 LDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred eccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence 99995 667999999999 9999999998888889999999999999999999996 599999999999999654
No 384
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=331.34 Aligned_cols=261 Identities=22% Similarity=0.310 Sum_probs=220.3
Q ss_pred HHhhcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCccc
Q 011302 74 LRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPT 153 (489)
Q Consensus 74 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 153 (489)
++....++......+.++||.|.||+||+|+.+-+.+ ....||||.++...-. +....|..|+.||.+++||||++
T Consensus 619 vreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgk--re~~VAIKTLK~Gyte--kqrrdFL~EAsIMGQFdHPNIIr 694 (996)
T KOG0196|consen 619 VREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGK--REITVAIKTLKAGYTE--KQRRDFLSEASIMGQFDHPNIIR 694 (996)
T ss_pred HHHhhhhcChhheEEEEEEecccccceecccccCCCC--cceeEEEeeeccCccH--HHHhhhhhhhhhcccCCCCcEEE
Confidence 3444556777889999999999999999999987654 5678999999865432 45667889999999999999999
Q ss_pred ccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEc
Q 011302 154 LYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 154 l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
|.|+....+.+.||+|||++|+|..+|+.+. +.|+.-+...|++.|+.||.||-+.|.|||||..+|||++.+-.+|++
T Consensus 695 LEGVVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVs 773 (996)
T KOG0196|consen 695 LEGVVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVS 773 (996)
T ss_pred EEEEEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEec
Confidence 9999999999999999999999999998875 569999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||+++.+...+..
T Consensus 774 DFGLSRvledd~~~------------------------------------------------------------------ 787 (996)
T KOG0196|consen 774 DFGLSRVLEDDPEA------------------------------------------------------------------ 787 (996)
T ss_pred cccceeecccCCCc------------------------------------------------------------------
Confidence 99999755432110
Q ss_pred CccccccccccCCccccC--CCCccCcchhcCCCCCCcccHHHHHHHHHHHh-hCCCCCCCCCcHHHHHHHhcCCCCCCC
Q 011302 314 DPEVVAEPINARSKSFVG--THEYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 390 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~G--t~~y~aPE~l~~~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~p~ 390 (489)
..++..| ...|.|||.|...+++.++||||+|+++||.+ +|+.||...++++++..|..+-.-.|.
T Consensus 788 -----------~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP 856 (996)
T KOG0196|consen 788 -----------AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP 856 (996)
T ss_pred -----------cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC
Confidence 0011111 35799999999999999999999999999987 699999999999999988776433333
Q ss_pred CCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 391 IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 391 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..++. .|.+|+..||++|-.+||.+.
T Consensus 857 mDCP~--------aL~qLMldCWqkdR~~RP~F~ 882 (996)
T KOG0196|consen 857 MDCPA--------ALYQLMLDCWQKDRNRRPKFA 882 (996)
T ss_pred CCCcH--------HHHHHHHHHHHHHhhcCCCHH
Confidence 33332 488999999999999999987
No 385
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=298.99 Aligned_cols=266 Identities=22% Similarity=0.316 Sum_probs=204.1
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHH-HHhCCCCCcccccceee
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI-LTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~-l~~l~hpnIv~l~~~~~ 159 (489)
+..++.+-+..||.|+||+|++-.++. .++..|||.++..... ....++.+|.+. ++.-+.||||++||+.-
T Consensus 61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~-----sg~~mAVKrIr~~n~~--keq~rll~e~d~~mks~~cp~IVkfyGa~F 133 (361)
T KOG1006|consen 61 FTSDNLQDLGEIGNGAFGTVNKMLHKP-----SGKLMAVKRIRSNNIE--KEQKRLLMEHDTVMKSSNCPNIVKFYGALF 133 (361)
T ss_pred cccchHHHHHHhcCCcchhhhhhhcCc-----cCcEEEEEEeeeccch--HHHHHHHHHHHHHHhhcCCcHHHHHhhhhh
Confidence 444566677889999999999999887 6889999999865442 334456666664 44557999999999999
Q ss_pred cCceEEEEEeecCCCchHHHHH---hCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEccc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQ---RQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~---~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
.++..++.||+| ..+|..+.+ ......++++-+-.|..-.+.||.||-+ .+||||||||+||||+..|.+|||||
T Consensus 134 ~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDF 212 (361)
T KOG1006|consen 134 SEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDF 212 (361)
T ss_pred cCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecc
Confidence 999999999999 677743322 2233678998888899999999999985 58999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|++-.+.. .+
T Consensus 213 GIcGqLv~---------------Si------------------------------------------------------- 222 (361)
T KOG1006|consen 213 GICGQLVD---------------SI------------------------------------------------------- 222 (361)
T ss_pred cchHhHHH---------------HH-------------------------------------------------------
Confidence 99722210 00
Q ss_pred cccccccccCCccccCCCCccCcchhcC--CCCCCcccHHHHHHHHHHHhhCCCCCCCCCc-HHHHHHHhcCCCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPFKGENN-EKTLINILKKPLTFPRIG 392 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~~~p~~~ 392 (489)
-.+.-+|...|||||.+.. .+|+-++|+||||++|||+.||..||.+.+. .+++..+..+.. ...
T Consensus 223 ---------AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdp---p~l 290 (361)
T KOG1006|consen 223 ---------AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDP---PIL 290 (361)
T ss_pred ---------HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCC---Cee
Confidence 0011268899999999964 4589999999999999999999999998765 344555555432 222
Q ss_pred CCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 393 VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 393 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.......+....+..||.-||.+|-..||... +|+++||++-..
T Consensus 291 ~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~----~Lk~~~fyr~y~ 334 (361)
T KOG1006|consen 291 LFDKECVHYSFSMVRFINTCLIKDRSDRPKYD----DLKKFPFYRMYA 334 (361)
T ss_pred cCcccccccCHHHHHHHHHHhhcccccCcchh----hhhcCchhhhhh
Confidence 22222233344689999999999999999997 999999997653
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.1e-37 Score=317.56 Aligned_cols=272 Identities=22% Similarity=0.244 Sum_probs=189.7
Q ss_pred CccccCCceeeeeeccCCceeEEEEEEccCC-----------CCCCCeeEEEEeeehHHHHHHH-----------HHHHH
Q 011302 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPM-----------VGLPQCFYAMKVVDREALAIRK-----------KLHRA 136 (489)
Q Consensus 79 ~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~-----------~~~~~~~~aiK~~~~~~~~~~~-----------~~~~~ 136 (489)
.++..++|.+.++||+|+||+||+|.+.... ....++.||||.+......... ..+..
T Consensus 140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence 3456789999999999999999999763211 1124567999998643211111 12234
Q ss_pred HHHHHHHHhCCCCCc-----ccccceeec--------CceEEEEEeecCCCchHHHHHhCCC------------------
Q 011302 137 DMEKVILTMLDHPFL-----PTLYAEFEA--------SHYSCLVMEYCPGGDLYAARQRQPG------------------ 185 (489)
Q Consensus 137 ~~E~~~l~~l~hpnI-----v~l~~~~~~--------~~~~~lV~E~~~gg~L~~~l~~~~~------------------ 185 (489)
..|+.++.+++|.++ ++++++|.. .+..||||||+++|+|.+++....+
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~ 299 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD 299 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence 457777777766554 677777643 3568999999999999998864211
Q ss_pred ----CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhh
Q 011302 186 ----KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYE 261 (489)
Q Consensus 186 ----~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~ 261 (489)
..+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||++.......
T Consensus 300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~---------------- 363 (507)
T PLN03224 300 NMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI---------------- 363 (507)
T ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC----------------
Confidence 124567788999999999999999999999999999999999999999999983221000
Q ss_pred ccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchh
Q 011302 262 KCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVI 341 (489)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l 341 (489)
........+|+.|+|||++
T Consensus 364 -------------------------------------------------------------~~~~~~g~~tp~Y~aPE~l 382 (507)
T PLN03224 364 -------------------------------------------------------------NFNPLYGMLDPRYSPPEEL 382 (507)
T ss_pred -------------------------------------------------------------ccCccccCCCcceeChhhh
Confidence 0000112358999999998
Q ss_pred cCCC--------------------C--CCcccHHHHHHHHHHHhhCCC-CCCCCCcH-----------HHHHHHhcCCCC
Q 011302 342 SGQG--------------------H--GSAVDWWTLGVFLYEMLYGTT-PFKGENNE-----------KTLINILKKPLT 387 (489)
Q Consensus 342 ~~~~--------------------~--~~~~DiwSlGvil~elltG~~-Pf~~~~~~-----------~~~~~i~~~~~~ 387 (489)
.... | ..+.||||+||++|||++|.. ||.+.... ..+..+....+.
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~ 462 (507)
T PLN03224 383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYD 462 (507)
T ss_pred cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCC
Confidence 6432 1 124799999999999999986 77543211 111222223333
Q ss_pred CCCCCCCCchhHHHHhhHHHHHHHHhhcCc---ccccCCCCChHHHHcCCCcCC
Q 011302 388 FPRIGVSSSKEFEEVVKLQDLISKLLVKNP---KKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 388 ~p~~~~~~~~~~~~~~~l~~li~~~L~~dP---~~R~~~~~~~~~ll~hp~f~~ 438 (489)
++..... ...++|||.+||..+| .+|+++. |+|+||||..
T Consensus 463 ~~~~d~~-------s~~~~dLi~~LL~~~~~~~~~RlSa~----eaL~Hp~f~~ 505 (507)
T PLN03224 463 FSLLDRN-------KEAGWDLACKLITKRDQANRGRLSVG----QALSHRFFLP 505 (507)
T ss_pred ccccccc-------ChHHHHHHHHHhccCCCCcccCCCHH----HHhCCCCcCC
Confidence 3322111 2358999999999876 6899998 9999999954
No 387
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.2e-38 Score=282.31 Aligned_cols=260 Identities=24% Similarity=0.390 Sum_probs=202.9
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeec
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEA 160 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~ 160 (489)
..++|++++++|+|-|++||.|.... ++..+.||+++.-. ...+.+|+.+|..|. ||||++|+++..+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~-----~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~D 104 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINIT-----NNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKD 104 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccC-----CCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcC
Confidence 45899999999999999999998765 45677899987543 234556999999996 9999999999976
Q ss_pred C--ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc-CCcEEEcccCC
Q 011302 161 S--HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE-DGHIMLSDFDL 237 (489)
Q Consensus 161 ~--~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~-~~~vkl~DFG~ 237 (489)
. ....||+||+++.+...+. ..|+...++.++.|++.||.|||+.||+|||+||.|+||+. ...++|+|+|+
T Consensus 105 p~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGL 179 (338)
T KOG0668|consen 105 PESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGL 179 (338)
T ss_pred ccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecch
Confidence 4 4678999999998886654 35888999999999999999999999999999999999994 56799999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
|..+.+..
T Consensus 180 AEFYHp~~------------------------------------------------------------------------ 187 (338)
T KOG0668|consen 180 AEFYHPGK------------------------------------------------------------------------ 187 (338)
T ss_pred HhhcCCCc------------------------------------------------------------------------
Confidence 95543211
Q ss_pred cccccccCCccccCCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCC-CCCCcHHHHHHHhc------------
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPF-KGENNEKTLINILK------------ 383 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf-~~~~~~~~~~~i~~------------ 383 (489)
...-.+.+..|--||.+..- .|+..-|+|||||+|..|+..+.|| .|.++.+++.+|.+
T Consensus 188 -------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 188 -------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred -------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence 11223567889999998764 4899999999999999999988886 56777766665532
Q ss_pred -CCCCCC----C-CCCCCchhHH----------HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 384 -KPLTFP----R-IGVSSSKEFE----------EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 384 -~~~~~p----~-~~~~~~~~~~----------~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
-.+..+ . .+......|. ..+++.|||.++|..|-.+|+|+. |++.||||..+-
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTak----Eam~HpyF~~~~ 329 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAK----EAMAHPYFAPVR 329 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchH----HHhcCchHHHHH
Confidence 011111 1 0111111121 124689999999999999999998 999999998753
No 388
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=289.35 Aligned_cols=266 Identities=24% Similarity=0.294 Sum_probs=206.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC--
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS-- 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-- 161 (489)
.+.+-.+.||.|+||.||.+.+-. .++.+|+|.+..-. ..-....++.+|..+|..+.|.||+..++..+-.
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPR-----dgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~ 126 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPR-----SGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANP 126 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCC-----CccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCc
Confidence 356667899999999999998876 67889999886432 2233456788899999999999999999977643
Q ss_pred ---ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 162 ---HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 162 ---~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
+.+|+|+|+| ..+|..++-.- ..++.+.++.+++||+.||+|||+.||.||||||.|+|++.|..+||||||+|
T Consensus 127 dfFqEiYV~TELm-QSDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 127 SFFQELYVLTELM-QSDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred hHHHHHHHHHHHH-HhhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccc
Confidence 2578999999 67887776543 67999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccc
Q 011302 239 FKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVV 318 (489)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (489)
+..+....
T Consensus 204 Rvee~d~~------------------------------------------------------------------------ 211 (449)
T KOG0664|consen 204 RTWDQRDR------------------------------------------------------------------------ 211 (449)
T ss_pred cccchhhh------------------------------------------------------------------------
Confidence 54322110
Q ss_pred ccccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHh---------------
Q 011302 319 AEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL--------------- 382 (489)
Q Consensus 319 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~--------------- 382 (489)
...+.-+-|-+|+|||+++|.. |+.++||||+|||+.||+..+..|...++.+.+.-|.
T Consensus 212 -----~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 212 -----LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred -----hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 0112235688999999999976 7999999999999999999999999887766555442
Q ss_pred --------cCCCCCCCCCCCCc--hhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 383 --------KKPLTFPRIGVSSS--KEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 383 --------~~~~~~p~~~~~~~--~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
++....|....... .......+..+++.+||..||++|.+.. +++.|+|....
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~----~A~~~~~~~e~ 349 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVE----EALQHRYLEEG 349 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHh----hhccccccccc
Confidence 22333333221110 0001223567999999999999999987 89999998654
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-38 Score=322.60 Aligned_cols=250 Identities=27% Similarity=0.339 Sum_probs=198.3
Q ss_pred ceeeeeeccCCcee-EEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCce
Q 011302 86 FRLLRRLGSGDIGN-VYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHY 163 (489)
Q Consensus 86 y~~~~~lG~G~fg~-Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~ 163 (489)
|.--+.+|.|+-|+ ||+|...+ +.||||++-.+. ...+.+|+.+|+.-+ |||||++|+.-.+.++
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~-------R~VAVKrll~e~------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF 577 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEG-------REVAVKRLLEEF------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQF 577 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCC-------ceehHHHHhhHh------HHHHHHHHHHHHhccCCCceEEEEeeccCCce
Confidence 34446789999986 79998875 688999986553 335667999998875 9999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc---C--CcEEEcccC
Q 011302 164 SCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE---D--GHIMLSDFD 236 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~---~--~~vkl~DFG 236 (489)
.||..|+| ..+|.+++... ..........+.++.|++.||++||+.+||||||||.||||+. + ..++|+|||
T Consensus 578 ~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg 656 (903)
T KOG1027|consen 578 LYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFG 656 (903)
T ss_pred EEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccc
Confidence 99999999 78999999874 1111111345778999999999999999999999999999986 3 468999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+++++..-+..+
T Consensus 657 lsKkl~~~~sS~-------------------------------------------------------------------- 668 (903)
T KOG1027|consen 657 LSKKLAGGKSSF-------------------------------------------------------------------- 668 (903)
T ss_pred cccccCCCcchh--------------------------------------------------------------------
Confidence 997665322211
Q ss_pred ccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhC-CCCCCCCCcHHHHHHHhcCCCCCCCCCCCC
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYG-TTPFKGENNEKTLINILKKPLTFPRIGVSS 395 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~ 395 (489)
++..+..||-+|+|||++....-+.++|||||||++|+.++| ..||...- +...+|+.+....-......
T Consensus 669 -------~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L~~L~~~~ 739 (903)
T KOG1027|consen 669 -------SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYTLVHLEPLP 739 (903)
T ss_pred -------hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCccceeeeccCc
Confidence 123455799999999999999888999999999999999985 99996544 34457777766544333221
Q ss_pred chhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 396 SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 396 ~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.. ++.|||.+||+.+|..||++. ++|.||||
T Consensus 740 d~------eA~dLI~~ml~~dP~~RPsa~----~VL~HPlF 770 (903)
T KOG1027|consen 740 DC------EAKDLISRMLNPDPQLRPSAT----DVLNHPLF 770 (903)
T ss_pred hH------HHHHHHHHhcCCCcccCCCHH----HHhCCCcc
Confidence 11 589999999999999999998 99999999
No 390
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=9.3e-36 Score=281.83 Aligned_cols=243 Identities=44% Similarity=0.709 Sum_probs=197.4
Q ss_pred CceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeecCCCc
Q 011302 96 DIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGD 175 (489)
Q Consensus 96 ~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~ 175 (489)
+||.||+|.+.+ .++.+|+|++........ ...+..|+..++.++|+||+++++.+......++||||+++++
T Consensus 1 ~~g~v~~~~~~~-----~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~ 73 (244)
T smart00220 1 SFGKVYLARDKK-----TGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGD 73 (244)
T ss_pred CceEEEEEEECC-----CCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCC
Confidence 689999999886 467899999976543321 4567779999999999999999999999999999999999999
Q ss_pred hHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhH
Q 011302 176 LYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFE 255 (489)
Q Consensus 176 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~ 255 (489)
|..++... ..+++..+..++.+++.+|.|||+.+|+|+||+|.||+++.++.++|+|||.+......
T Consensus 74 L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~----------- 140 (244)
T smart00220 74 LFDLLKKR--GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPG----------- 140 (244)
T ss_pred HHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccc-----------
Confidence 99988765 23889999999999999999999999999999999999999999999999997432210
Q ss_pred HHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCCCc
Q 011302 256 AIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEY 335 (489)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y 335 (489)
.......|+..|
T Consensus 141 --------------------------------------------------------------------~~~~~~~~~~~~ 152 (244)
T smart00220 141 --------------------------------------------------------------------GLLTTFVGTPEY 152 (244)
T ss_pred --------------------------------------------------------------------cccccccCCcCC
Confidence 011233578899
Q ss_pred cCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCC-CCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhh
Q 011302 336 LAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG-ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLV 414 (489)
Q Consensus 336 ~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~ 414 (489)
++||.+.+..++.++||||||+++|+|++|..||.. .+.......+............. ....+.+++.+||.
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~~l~ 226 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWK------ISPEAKDLIRKLLV 226 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcccccc------CCHHHHHHHHHHcc
Confidence 999999988889999999999999999999999988 44444444444333332221110 11248899999999
Q ss_pred cCcccccCCCCChHHHHcCCCc
Q 011302 415 KNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 415 ~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.+|++||++. ++++||||
T Consensus 227 ~~p~~Rp~~~----~~~~~~~~ 244 (244)
T smart00220 227 KDPEKRLTAE----EALQHPFF 244 (244)
T ss_pred CCchhccCHH----HHhhCCCC
Confidence 9999999997 99999997
No 391
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-37 Score=304.53 Aligned_cols=202 Identities=31% Similarity=0.504 Sum_probs=178.2
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHH-----HHHHHHHHHHHHHhCC---CCCcccc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-----KLHRADMEKVILTMLD---HPFLPTL 154 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~-----~~~~~~~E~~~l~~l~---hpnIv~l 154 (489)
..+|..++.||+|+||.|++|.++. ....|.||.+.++.+-.+. ++-.+-.|+.||..++ |+||+++
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~-----n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKE-----NNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL 634 (772)
T ss_pred cccceeeeeccccccceEEEeeecc-----cceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence 4679999999999999999999998 4678999999988655333 3344567999999998 9999999
Q ss_pred cceeecCceEEEEEeec-CCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEc
Q 011302 155 YAEFEASHYSCLVMEYC-PGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLS 233 (489)
Q Consensus 155 ~~~~~~~~~~~lV~E~~-~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~ 233 (489)
+++|++++++||+||-- +|.+|++++... .+++|.+++.|++|++.|+++||++||||||||-+|+.++.+|.+||+
T Consensus 635 LdfFEddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 635 LDFFEDDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred hheeecCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEe
Confidence 99999999999999985 467999999987 579999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccC
Q 011302 234 DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLD 313 (489)
Q Consensus 234 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (489)
|||.|....
T Consensus 713 dfgsaa~~k----------------------------------------------------------------------- 721 (772)
T KOG1152|consen 713 DFGSAAYTK----------------------------------------------------------------------- 721 (772)
T ss_pred eccchhhhc-----------------------------------------------------------------------
Confidence 999872110
Q ss_pred CccccccccccCCccccCCCCccCcchhcCCCC-CCcccHHHHHHHHHHHhhCCCCCCC
Q 011302 314 DPEVVAEPINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKG 371 (489)
Q Consensus 314 ~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~~DiwSlGvil~elltG~~Pf~~ 371 (489)
+.....++||..|.|||++.|.+| +..-||||||++||.+++.+.||+.
T Consensus 722 ---------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 722 ---------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred ---------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 123346799999999999999998 8899999999999999999999974
No 392
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=6.1e-37 Score=294.15 Aligned_cols=300 Identities=24% Similarity=0.364 Sum_probs=210.0
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecC
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEAS 161 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~ 161 (489)
.+.|.++.+||+|+|++||+|.+... ....++||+|.+.... ...++..|.++|..+. +.||+++.+++..+
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~--~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQ--DTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhh--ccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 36899999999999999999998763 2357899999997542 3445777999999985 89999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEec-cCCcEEEcccCCCcc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVR-EDGHIMLSDFDLSFK 240 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~-~~~~vkl~DFG~a~~ 240 (489)
+..++||||++..+..++... ++..+++.|++.++.||.++|.+|||||||||.|+|.+ ..+.-.|+|||+|..
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred CeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHH
Confidence 999999999999999888753 77899999999999999999999999999999999998 457889999999842
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCC-----CCC-CCCccccccccccccccccccccccccccccCCCCCCccccCC
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSC-----ATP-MQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDD 314 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (489)
. +.|+......+ .++ +.....+..-.+ .....
T Consensus 183 ~----------------d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~--------------------------~~~p~ 220 (418)
T KOG1167|consen 183 Y----------------DGYQQTEHSRSYSGRHATPAMGKDVHCQSVAT--------------------------ASKPA 220 (418)
T ss_pred H----------------HhhhhhhhhhhhhcccCCccccCccccccccc--------------------------ccCCC
Confidence 1 11111111000 000 000000000000 00000
Q ss_pred cccc--ccccccCCccccCCCCccCcchhcCCC-CCCcccHHHHHHHHHHHhhCCCCCCCC-CcHHHHHHHh--------
Q 011302 315 PEVV--AEPINARSKSFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGE-NNEKTLINIL-------- 382 (489)
Q Consensus 315 ~~~~--~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~-------- 382 (489)
+.+. ............||++|+|||++...+ .++++||||.|||+.-++++..||... +....+.+|.
T Consensus 221 g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~m 300 (418)
T KOG1167|consen 221 GYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEM 300 (418)
T ss_pred CceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHH
Confidence 0111 122233455679999999999998766 589999999999999999999998543 2222222221
Q ss_pred ------cCC--CC----CC----------CCC---CC-------CchhHHH--HhhHHHHHHHHhhcCcccccCCCCChH
Q 011302 383 ------KKP--LT----FP----------RIG---VS-------SSKEFEE--VVKLQDLISKLLVKNPKKRIGSLKGSV 428 (489)
Q Consensus 383 ------~~~--~~----~p----------~~~---~~-------~~~~~~~--~~~l~~li~~~L~~dP~~R~~~~~~~~ 428 (489)
.+. +. ++ ... +. ....+.+ +..+.||+.+||+.||.+|.+++
T Consensus 301 rk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAE---- 376 (418)
T KOG1167|consen 301 RKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAE---- 376 (418)
T ss_pred HHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHH----
Confidence 011 00 00 000 00 0011111 12578999999999999999998
Q ss_pred HHHcCCCcCCCC
Q 011302 429 EIKRHEFFKGIN 440 (489)
Q Consensus 429 ~ll~hp~f~~~~ 440 (489)
++|+||||...+
T Consensus 377 eALkHpFF~~~~ 388 (418)
T KOG1167|consen 377 DALKHPFFDEAD 388 (418)
T ss_pred HHhcCcCCcchh
Confidence 999999998554
No 393
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-37 Score=306.34 Aligned_cols=261 Identities=28% Similarity=0.436 Sum_probs=216.8
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|.++.++|.|+||.||+|+++. ++++.|+|+++.+.-. .+.-++.|+-+++.++|||||.+++.+-...
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~-----s~elaavkvVkLep~d---d~~~iqqei~~~~dc~h~nivay~gsylr~d 85 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKR-----SGELAAVKVVKLEPGD---DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD 85 (829)
T ss_pred ccchhheeeecCCcccchhhhcccc-----cCchhhheeeeccCCc---cccccccceeeeecCCCcChHHHHhhhhhhc
Confidence 4799999999999999999999987 6788999999865433 2333445888999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
.++++||||.||+|.+..+-. +.+++.++..++++.+.||+|||++|=+|||||-.|||+++.|.+|++|||.+-.+.
T Consensus 86 klwicMEycgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit 163 (829)
T KOG0576|consen 86 KLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT 163 (829)
T ss_pred CcEEEEEecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh
Confidence 999999999999998876554 789999999999999999999999999999999999999999999999999872110
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 164 ------------------------------------------------------------------------------at 165 (829)
T KOG0576|consen 164 ------------------------------------------------------------------------------AT 165 (829)
T ss_pred ------------------------------------------------------------------------------hh
Confidence 00
Q ss_pred ccCCccccCCCCccCcchhc---CCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 323 NARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
-.+..++.|||+|||||+-. ...|...+|||++|+...||---++|....-+...+.-..+..+..|....+...
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kw-- 243 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKW-- 243 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccc--
Confidence 12456789999999999963 4569999999999999999999999987777766666555655555554433321
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
. ..+-+|++.+|.++|.+||++. .+|+|||...-
T Consensus 244 s--~~fh~fvK~altknpKkRptae----klL~h~fvs~~ 277 (829)
T KOG0576|consen 244 S--EFFHNFVKGALTKNPKKRPTAE----KLLQHPFVSQT 277 (829)
T ss_pred h--HHHHHHHHHHhcCCCccCCChh----hheeceeeccc
Confidence 1 2378999999999999999998 88999998543
No 394
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-35 Score=311.61 Aligned_cols=262 Identities=23% Similarity=0.318 Sum_probs=207.7
Q ss_pred cCccccCCceeeeeeccCCceeEEEEEEccCCCCC--CCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccc
Q 011302 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGL--PQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTL 154 (489)
Q Consensus 78 ~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l 154 (489)
.+++..++..+.+.||+|.||.|++|...+..... ....||||.++..... .....+..|..+|+.+. ||||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhh
Confidence 45666677778889999999999999977544331 3678999999866544 45567788999999985 9999999
Q ss_pred cceeecCceEEEEEeecCCCchHHHHHhCC------C--------CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCC
Q 011302 155 YAEFEASHYSCLVMEYCPGGDLYAARQRQP------G--------KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPE 220 (489)
Q Consensus 155 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~------~--------~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~ 220 (489)
++++...+.+++|+|||..|+|..+++... . ..++..+...++.||+.|++||++.++|||||..+
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999999999999998763 0 13888899999999999999999999999999999
Q ss_pred CeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCcccccccccccccccccccccccccc
Q 011302 221 NVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIRE 300 (489)
Q Consensus 221 NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (489)
|||+..+..+||+|||+|+.........
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~---------------------------------------------------- 475 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYR---------------------------------------------------- 475 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceE----------------------------------------------------
Confidence 9999999999999999996432211100
Q ss_pred ccCCCCCCccccCCccccccccccCCccccC--CCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCC-cHH
Q 011302 301 QVDGDHHDQELLDDPEVVAEPINARSKSFVG--THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGEN-NEK 376 (489)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--t~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~-~~~ 376 (489)
...-.| ...|||||.+....|+.++|||||||+||||++ |..||.+.. ..+
T Consensus 476 -------------------------~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~ 530 (609)
T KOG0200|consen 476 -------------------------TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE 530 (609)
T ss_pred -------------------------ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence 000012 235999999999999999999999999999997 999999866 555
Q ss_pred HHHHHhcCCC-CCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCCh
Q 011302 377 TLINILKKPL-TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGS 427 (489)
Q Consensus 377 ~~~~i~~~~~-~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~ 427 (489)
.+..+..+.. ..|.. +. .++.+|++.||+.+|++||++.+-.
T Consensus 531 l~~~l~~G~r~~~P~~---c~------~eiY~iM~~CW~~~p~~RP~F~~~~ 573 (609)
T KOG0200|consen 531 LLEFLKEGNRMEQPEH---CS------DEIYDLMKSCWNADPEDRPTFSECV 573 (609)
T ss_pred HHHHHhcCCCCCCCCC---CC------HHHHHHHHHHhCCCcccCCCHHHHH
Confidence 5554544432 22221 12 2478999999999999999997433
No 395
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.6e-35 Score=335.62 Aligned_cols=241 Identities=19% Similarity=0.225 Sum_probs=183.2
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCce
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHY 163 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 163 (489)
..|.....||+|+||.||+|+++. .+..||||.+..... ....|+.++++++|||||++++++.+.+.
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~ 757 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIK-----NGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKG 757 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECC-----CCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCC
Confidence 345667789999999999999875 467899999864321 11236788999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 164 SCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLH---MMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
.|+||||+++|+|.++++ .+++..+..|+.|++.||+||| +.+|+||||||+|||++.++..++. ||.+..
T Consensus 758 ~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~ 831 (968)
T PLN00113 758 AYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGL 831 (968)
T ss_pred CEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccc
Confidence 999999999999999985 3789999999999999999999 6699999999999999998888775 655311
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
..
T Consensus 832 ~~------------------------------------------------------------------------------ 833 (968)
T PLN00113 832 LC------------------------------------------------------------------------------ 833 (968)
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCc----HHHHHHHhcCC-----CCCCCC
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN----EKTLINILKKP-----LTFPRI 391 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~-----~~~p~~ 391 (489)
......||+.|||||++.+..++.++|||||||++|||++|+.||+.... ...+.+..... +..|..
T Consensus 834 ----~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (968)
T PLN00113 834 ----TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSI 909 (968)
T ss_pred ----cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccc
Confidence 00122588999999999999999999999999999999999999964321 11111111100 001111
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.........+..++.+++.+||+.||++||++.
T Consensus 910 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ 942 (968)
T PLN00113 910 RGDVSVNQNEIVEVMNLALHCTATDPTARPCAN 942 (968)
T ss_pred cCCCCccHHHHHHHHHHHHhhCcCCchhCcCHH
Confidence 111111223445678999999999999999997
No 396
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-35 Score=281.11 Aligned_cols=248 Identities=24% Similarity=0.319 Sum_probs=185.1
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHH--HHhCCCCCcccccceeec
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI--LTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~--l~~l~hpnIv~l~~~~~~ 160 (489)
..+.++++.||+|.||+||+|.+++ ..||||++...... ...+|.++ ...|+|+||+.+++.=..
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wrG-------e~VAVKiF~srdE~------SWfrEtEIYqTvmLRHENILgFIaaD~~ 276 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWRG-------EDVAVKIFSSRDER------SWFRETEIYQTVMLRHENILGFIAADNK 276 (513)
T ss_pred hheeEEEEEecCccccceeeccccC-------CceEEEEecccchh------hhhhHHHHHHHHHhccchhhhhhhcccc
Confidence 3578999999999999999999996 67899999754322 22234444 445799999999986543
Q ss_pred C----ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-----C---CCeeecCCCCCeEeccCC
Q 011302 161 S----HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-----M---GIVYRDLKPENVLVREDG 228 (489)
Q Consensus 161 ~----~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-----~---~iiHrDIKp~NILl~~~~ 228 (489)
+ .+++||++|.+.|+|+|+|.++ .++.+....++..++.||+|||. + .|.|||||..|||+..+|
T Consensus 277 ~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~ 353 (513)
T KOG2052|consen 277 DNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 353 (513)
T ss_pred CCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCC
Confidence 3 2689999999999999999884 69999999999999999999994 2 399999999999999999
Q ss_pred cEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCC
Q 011302 229 HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHD 308 (489)
Q Consensus 229 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (489)
.+-|+|+|+|-.......
T Consensus 354 ~C~IADLGLAv~h~~~t~-------------------------------------------------------------- 371 (513)
T KOG2052|consen 354 TCCIADLGLAVRHDSDTD-------------------------------------------------------------- 371 (513)
T ss_pred cEEEeeceeeEEecccCC--------------------------------------------------------------
Confidence 999999999843321110
Q ss_pred ccccCCccccccccccCCccccCCCCccCcchhcCCC----C--CCcccHHHHHHHHHHHhhC----------CCCCCCC
Q 011302 309 QELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG----H--GSAVDWWTLGVFLYEMLYG----------TTPFKGE 372 (489)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~--~~~~DiwSlGvil~elltG----------~~Pf~~~ 372 (489)
..+......+||..|||||+|...- + -..+||||||.++||++-. ++||.+.
T Consensus 372 ------------~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 372 ------------TIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ------------cccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 0111234458999999999996532 1 2468999999999999832 5788653
Q ss_pred ----CcHHHHHHHhc-CCC--CCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 373 ----NNEKTLINILK-KPL--TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 373 ----~~~~~~~~i~~-~~~--~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
...+.+.++.- ..+ .+|.... ..+....+..||+.||..||..|+++.
T Consensus 440 Vp~DPs~eeMrkVVCv~~~RP~ipnrW~----s~~~l~~m~klMkeCW~~Np~aRltAL 494 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVCVQKLRPNIPNRWK----SDPALRVMAKLMKECWYANPAARLTAL 494 (513)
T ss_pred CCCCCCHHHHhcceeecccCCCCCcccc----cCHHHHHHHHHHHHhhcCCchhhhHHH
Confidence 23344444432 222 2222111 123344677999999999999999986
No 397
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-35 Score=283.55 Aligned_cols=247 Identities=24% Similarity=0.348 Sum_probs=186.6
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHh--CCCCCcccccceee
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM--LDHPFLPTLYAEFE 159 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~~~ 159 (489)
.+...+++++||+|.||.||+|+..+ +.||||++.... ...+..|.+|.+. +.|+||++++++-+
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL~~-------~~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ek 274 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQLDN-------RLVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFIGAEK 274 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhccC-------ceeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhhchhc
Confidence 35667888999999999999999875 789999998654 3345667777765 57999999999776
Q ss_pred cCc----eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhC---------CCeeecCCCCCeEecc
Q 011302 160 ASH----YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMM---------GIVYRDLKPENVLVRE 226 (489)
Q Consensus 160 ~~~----~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~---------~iiHrDIKp~NILl~~ 226 (489)
... .++||+||.+.|+|.++|..+ ..++.+...|+..|++||+|||+- .|+|||||..||||..
T Consensus 275 r~t~~~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~ 351 (534)
T KOG3653|consen 275 RGTADRMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN 351 (534)
T ss_pred cCCccccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc
Confidence 544 889999999999999999885 699999999999999999999963 4999999999999999
Q ss_pred CCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCC
Q 011302 227 DGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDH 306 (489)
Q Consensus 227 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (489)
|+++.|+|||+|.++.+-.. .
T Consensus 352 DlTccIaDFGLAl~~~p~~~--------------------------------------------------------~--- 372 (534)
T KOG3653|consen 352 DLTCCIADFGLALRLEPGKP--------------------------------------------------------Q--- 372 (534)
T ss_pred CCcEEeeccceeEEecCCCC--------------------------------------------------------C---
Confidence 99999999999966542100 0
Q ss_pred CCccccCCccccccccccCCccccCCCCccCcchhcCCCC-C-----CcccHHHHHHHHHHHhhCCCCCC-C--------
Q 011302 307 HDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGH-G-----SAVDWWTLGVFLYEMLYGTTPFK-G-------- 371 (489)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~-----~~~DiwSlGvil~elltG~~Pf~-~-------- 371 (489)
.....-+||..|||||+|.|..- . .+.||||+|.+||||++...-++ +
T Consensus 373 -----------------~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlp 435 (534)
T KOG3653|consen 373 -----------------GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLP 435 (534)
T ss_pred -----------------cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCc
Confidence 01122489999999999977532 2 36899999999999997543332 1
Q ss_pred ------C-CcHHHHHH-Hhc--CCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 372 ------E-NNEKTLIN-ILK--KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 372 ------~-~~~~~~~~-i~~--~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
. ...+.+.. +.+ ....+|...... .....+++.|..||..|++.|+|+.
T Consensus 436 fe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h----~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 436 FEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH----AGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred hhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcC----ccHHHHHHHHHHHcCCchhhhhhhH
Confidence 1 11122222 222 223333322211 2233588999999999999999985
No 398
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-35 Score=255.42 Aligned_cols=218 Identities=25% Similarity=0.356 Sum_probs=174.5
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHh-CCCCCccccccee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM-LDHPFLPTLYAEF 158 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~ 158 (489)
++..++..-+..||+|++|.|-+.++.. ++...|+|.+...... +...+..+|+.+..+ ..+|++|.+||.+
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~-----sg~imAvKri~~tvn~--q~q~r~L~dldi~~r~~~CPf~V~FyGa~ 114 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQ-----SGTIMAVKRIRATVNS--QEQKRLLMDLDIIMRTVDCPFTVHFYGAL 114 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeecc-----CCeEEEEeeehhhcCh--HHHHHHHHhhhhhccCCCCCeEEEeehhh
Confidence 3455667778899999999998888876 6789999999765432 344566677776554 5799999999999
Q ss_pred ecCceEEEEEeecCCCchHHHHHh--CCCCCCChhhHHHHHHHHHHHHHHHHhC-CCeeecCCCCCeEeccCCcEEEccc
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQR--QPGKRFGISSAKFYAAETLLALEYLHMM-GIVYRDLKPENVLVREDGHIMLSDF 235 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDIKp~NILl~~~~~vkl~DF 235 (489)
.....+++.||.| .-+|..+... ..++..+|.-+-.|+..++.||.|||++ .|||||+||.||||+.+|+||||||
T Consensus 115 ~regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDF 193 (282)
T KOG0984|consen 115 FREGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDF 193 (282)
T ss_pred hccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccc
Confidence 9999999999999 6777554332 2457899999999999999999999986 8999999999999999999999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|++-.+..
T Consensus 194 GIsG~L~d------------------------------------------------------------------------ 201 (282)
T KOG0984|consen 194 GISGYLVD------------------------------------------------------------------------ 201 (282)
T ss_pred ccceeehh------------------------------------------------------------------------
Confidence 99733211
Q ss_pred cccccccccCCcc-ccCCCCccCcchhcC----CCCCCcccHHHHHHHHHHHhhCCCCCCCC-CcHHHHHHHhcCC
Q 011302 316 EVVAEPINARSKS-FVGTHEYLAPEVISG----QGHGSAVDWWTLGVFLYEMLYGTTPFKGE-NNEKTLINILKKP 385 (489)
Q Consensus 316 ~~~~~~~~~~~~~-~~Gt~~y~aPE~l~~----~~~~~~~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~ 385 (489)
+...+ -.|.-.|||||.+.. ..|+-++||||||+++.||.+++.||+.. ++.+++.++...+
T Consensus 202 --------SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep 269 (282)
T KOG0984|consen 202 --------SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEP 269 (282)
T ss_pred --------hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCC
Confidence 00011 257889999999864 36899999999999999999999999765 5667777776654
No 399
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-35 Score=298.56 Aligned_cols=252 Identities=22% Similarity=0.235 Sum_probs=201.2
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
..+..++||+|+||+||+|.+--.. +.-+..||||++...... +...++..|+.+|..++|||+++|++++.... +
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Peg-e~vKipVaiKvl~~~t~~--~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ 772 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEG-ENVKIPVAIKVLIEFTSP--KASIELLDEALRMASLDHPNLLRLLGVCMLST-L 772 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCC-ceecceeEEEEeeccCCc--hhhHHHHHHHHHHhcCCCchHHHHhhhcccch-H
Confidence 3455678999999999999986432 224668999998754332 44567788999999999999999999998766 8
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccC
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVV 244 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~ 244 (489)
-||++|+++|.|.++++.+. ..+.....+.|..||++||.|||++++|||||..+|||+....++||.|||+|+.+...
T Consensus 773 qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 89999999999999998764 67899999999999999999999999999999999999999999999999999665432
Q ss_pred ccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccccc
Q 011302 245 PKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINA 324 (489)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (489)
.....
T Consensus 852 ~~ey~--------------------------------------------------------------------------- 856 (1177)
T KOG1025|consen 852 EKEYS--------------------------------------------------------------------------- 856 (1177)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 21110
Q ss_pred CCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHh
Q 011302 325 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVV 403 (489)
Q Consensus 325 ~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~ 403 (489)
.....-.+.|||-|.+....|+.++|||||||++|||+| |..||.+....++-.-+..+. ..+....-. .
T Consensus 857 -~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge-RLsqPpiCt-------i 927 (1177)
T KOG1025|consen 857 -APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE-RLSQPPICT-------I 927 (1177)
T ss_pred -ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc-cCCCCCCcc-------H
Confidence 001112357999999999999999999999999999997 999999998776654443332 233222211 1
Q ss_pred hHHHHHHHHhhcCcccccCCCC
Q 011302 404 KLQDLISKLLVKNPKKRIGSLK 425 (489)
Q Consensus 404 ~l~~li~~~L~~dP~~R~~~~~ 425 (489)
++.-++.+||..|+..||++.+
T Consensus 928 DVy~~mvkCwmid~~~rp~fke 949 (1177)
T KOG1025|consen 928 DVYMVMVKCWMIDADSRPTFKE 949 (1177)
T ss_pred HHHHHHHHHhccCcccCccHHH
Confidence 3678999999999999999864
No 400
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=8e-32 Score=255.53 Aligned_cols=259 Identities=19% Similarity=0.190 Sum_probs=200.0
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE 159 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 159 (489)
.+..+++++...+-+|.||+||+|.+++...--..+.|-+|.++... ...++..+..|.-++..+.|||+..+.++..
T Consensus 280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 34557799999999999999999988864333334455566665433 2345667778888888899999999999774
Q ss_pred -cCceEEEEEeecCCCchHHHHHhCC------CCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEE
Q 011302 160 -ASHYSCLVMEYCPGGDLYAARQRQP------GKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIML 232 (489)
Q Consensus 160 -~~~~~~lV~E~~~gg~L~~~l~~~~------~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl 232 (489)
+....++++.++.-|+|..++.... ...++..+...++.|++.|++|||.+||||.||..+|++|++.-.|||
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence 5567788999999999999987321 234666777889999999999999999999999999999999999999
Q ss_pred cccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCcccc
Q 011302 233 SDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELL 312 (489)
Q Consensus 233 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (489)
+|=.+++.+-+ ++. +.+
T Consensus 438 tDsaLSRDLFP------------------------------------------------------------~DY---hcL 454 (563)
T KOG1024|consen 438 TDSALSRDLFP------------------------------------------------------------GDY---HCL 454 (563)
T ss_pred ccchhccccCc------------------------------------------------------------ccc---ccc
Confidence 99999854321 000 000
Q ss_pred CCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCC
Q 011302 313 DDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRI 391 (489)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~ 391 (489)
.+.+ --...||+||.+.+..|+.++|+|||||+||||+| |+.||...++.++..-+.++..--...
T Consensus 455 GDnE-------------nRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~ 521 (563)
T KOG1024|consen 455 GDNE-------------NRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPF 521 (563)
T ss_pred CCCC-------------CCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCC
Confidence 0000 12357999999999999999999999999999997 999999999998877776643211111
Q ss_pred CCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 392 GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 392 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.++ .++..++..||+.+|++||+..
T Consensus 522 NCP--------DeLf~vMacCWallpeeRPsf~ 546 (563)
T KOG1024|consen 522 NCP--------DELFTVMACCWALLPEERPSFS 546 (563)
T ss_pred CCc--------HHHHHHHHHHHhcCcccCCCHH
Confidence 222 2589999999999999999986
No 401
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-34 Score=287.70 Aligned_cols=264 Identities=41% Similarity=0.699 Sum_probs=221.7
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCceEEEEEe
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHYSCLVME 169 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E 169 (489)
.+|+|+||.|++++...... .+..||+|++++.....+... ....|..++...+ ||++|++...|+.+..+|++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~d--a~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld 77 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGAD--AGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILD 77 (612)
T ss_pred CCCcCCCcchHHHHHhcccc--ccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhh
Confidence 37999999999987654332 578899999987766544443 4556888888887 9999999999999999999999
Q ss_pred ecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccC
Q 011302 170 YCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLR 249 (489)
Q Consensus 170 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 249 (489)
|..||+|+..+... ..+.+...+.+..+++.+++++|+.+|||||+|++||+++.+|++|+.|||+++....
T Consensus 78 ~~rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~------ 149 (612)
T KOG0603|consen 78 FLRGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK------ 149 (612)
T ss_pred hcccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh------
Confidence 99999998877654 5688889999999999999999999999999999999999999999999999743210
Q ss_pred CcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccc
Q 011302 250 PKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSF 329 (489)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (489)
....
T Consensus 150 ----------------------------------------------------------------------------~~~~ 153 (612)
T KOG0603|consen 150 ----------------------------------------------------------------------------EKIA 153 (612)
T ss_pred ----------------------------------------------------------------------------hhhc
Confidence 0011
Q ss_pred cCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHH
Q 011302 330 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLI 409 (489)
Q Consensus 330 ~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li 409 (489)
|||..|||||+++ ++..++|+||||++.+||++|..||.+ ++...|.+....+|..... .+++++
T Consensus 154 cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~---------~a~~~~ 218 (612)
T KOG0603|consen 154 CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSA---------EARSLF 218 (612)
T ss_pred ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhH---------HHHHHH
Confidence 8999999999999 678899999999999999999999988 6777888766666653322 489999
Q ss_pred HHHhhcCcccccCCC-CChHHHHcCCCcCCCCcccc--ccCCCCCCCCcc
Q 011302 410 SKLLVKNPKKRIGSL-KGSVEIKRHEFFKGINWALI--RSIKPPEVPNND 456 (489)
Q Consensus 410 ~~~L~~dP~~R~~~~-~~~~~ll~hp~f~~~~~~~~--~~~~~p~~~~~~ 456 (489)
..++.++|.+|+... +...++++|+||.+++|+.+ +...||+.|...
T Consensus 219 ~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~ 268 (612)
T KOG0603|consen 219 RQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSI 268 (612)
T ss_pred HHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCccc
Confidence 999999999999985 56789999999999999965 667777776653
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=2.2e-32 Score=302.52 Aligned_cols=235 Identities=15% Similarity=0.166 Sum_probs=156.9
Q ss_pred CCC-CCccccccee-------ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecC
Q 011302 146 LDH-PFLPTLYAEF-------EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDL 217 (489)
Q Consensus 146 l~h-pnIv~l~~~~-------~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDI 217 (489)
++| +||++++++| .....++++|||+ +++|++++... ...+++.+++.|+.||+.||+|||++|||||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 445 5888888887 3345788899988 78999999753 356999999999999999999999999999999
Q ss_pred CCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccc
Q 011302 218 KPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTT 297 (489)
Q Consensus 218 Kp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (489)
||+||||+..|.+|++|||++....... ........|+........... ..+.
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~-------------------------~~~~ki~DfG~a~~~~~~~~~--~~~~ 159 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDE-------------------------DATTKSREIGSSRREEILSER--RIEK 159 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccc-------------------------cCccccccccccccccccccc--chhh
Confidence 9999999998999999999873211000 000001111111000000000 0000
Q ss_pred cccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHH
Q 011302 298 IREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT 377 (489)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~ 377 (489)
.......+........+||++|||||++.+..|+.++|||||||+||||++|.+||..... .
T Consensus 160 ----------------~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~ 221 (793)
T PLN00181 160 ----------------LEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR--T 221 (793)
T ss_pred ----------------hhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--H
Confidence 0000000001112335799999999999999999999999999999999999998764321 2
Q ss_pred HHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 378 LINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 378 ~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
+..+.... .|... ......+.+++.+||+.||.+||++. ++++||||...
T Consensus 222 ~~~~~~~~--~~~~~------~~~~~~~~~~~~~~L~~~P~~Rps~~----eil~h~~~~~~ 271 (793)
T PLN00181 222 MSSLRHRV--LPPQI------LLNWPKEASFCLWLLHPEPSCRPSMS----ELLQSEFINEP 271 (793)
T ss_pred HHHHHHhh--cChhh------hhcCHHHHHHHHHhCCCChhhCcChH----HHhhchhhhhh
Confidence 22222211 11110 01112467899999999999999998 99999999764
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=1.5e-30 Score=243.67 Aligned_cols=215 Identities=41% Similarity=0.641 Sum_probs=177.2
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEE
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 165 (489)
|.+.+.||+|+||.||+|...+ .++.+|+|.+...... .....+..|+..++.++|+||+++++++......|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~ 73 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKG-----TGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLY 73 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcC-----CCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceE
Confidence 5678899999999999999886 4678999999865433 23456777999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCc
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVP 245 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~ 245 (489)
+++||+++++|.+++..... .+++..+..++.+++.+|.|||+++++|+||+|.||+++.++.++|+|||++.......
T Consensus 74 ~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 74 LVMEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred EEEeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 99999999999999877521 18899999999999999999999999999999999999999999999999874322100
Q ss_pred cccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccC
Q 011302 246 KLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 325 (489)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (489)
...
T Consensus 153 -----------------------------------------------------------------------------~~~ 155 (225)
T smart00221 153 -----------------------------------------------------------------------------AAL 155 (225)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 001
Q ss_pred CccccCCCCccCcchh-cCCCCCCcccHHHHHHHHHHHhhCCCCCCC-CCcH-HHHHHHhcCC
Q 011302 326 SKSFVGTHEYLAPEVI-SGQGHGSAVDWWTLGVFLYEMLYGTTPFKG-ENNE-KTLINILKKP 385 (489)
Q Consensus 326 ~~~~~Gt~~y~aPE~l-~~~~~~~~~DiwSlGvil~elltG~~Pf~~-~~~~-~~~~~i~~~~ 385 (489)
.....++..|++||.+ ....++.++|||+||+++|||++|+.||.+ .+.. .+...|..+.
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 1233578899999999 666788899999999999999999999987 4444 5555555544
No 404
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=4.2e-30 Score=237.04 Aligned_cols=213 Identities=39% Similarity=0.592 Sum_probs=180.5
Q ss_pred eccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeec
Q 011302 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYC 171 (489)
Q Consensus 92 lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 171 (489)
||+|++|.||+|.... .++.+++|++....... ....+.+|+.+++.+.|++|+++++++......++||||+
T Consensus 1 l~~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~ 73 (215)
T cd00180 1 LGEGGFGTVYLARDKK-----TGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYC 73 (215)
T ss_pred CCcCCceEEEEEEecC-----CCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecC
Confidence 6899999999999875 46789999998664331 3456777999999999999999999999999999999999
Q ss_pred CCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc-CCcEEEcccCCCcccccCccccCC
Q 011302 172 PGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE-DGHIMLSDFDLSFKCDVVPKLLRP 250 (489)
Q Consensus 172 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~-~~~vkl~DFG~a~~~~~~~~~~~~ 250 (489)
+|++|.+++.... ..+++..+..++.+++.+|.+||++|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 74 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---- 148 (215)
T cd00180 74 EGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---- 148 (215)
T ss_pred CCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----
Confidence 9999999887642 35889999999999999999999999999999999999999 89999999998743221000
Q ss_pred cchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCcccc
Q 011302 251 KLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFV 330 (489)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (489)
......
T Consensus 149 --------------------------------------------------------------------------~~~~~~ 154 (215)
T cd00180 149 --------------------------------------------------------------------------LLKTIV 154 (215)
T ss_pred --------------------------------------------------------------------------hhhccc
Confidence 012235
Q ss_pred CCCCccCcchhcCC-CCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHH
Q 011302 331 GTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLI 409 (489)
Q Consensus 331 Gt~~y~aPE~l~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li 409 (489)
+...|++||.+... .++.+.|+|+||+++++| ..+.+++
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------~~~~~~l 194 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------PELKDLI 194 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------HHHHHHH
Confidence 77889999999887 788999999999999999 1378999
Q ss_pred HHHhhcCcccccCCCCChHHHHcCC
Q 011302 410 SKLLVKNPKKRIGSLKGSVEIKRHE 434 (489)
Q Consensus 410 ~~~L~~dP~~R~~~~~~~~~ll~hp 434 (489)
.+||..||++||++. ++++|+
T Consensus 195 ~~~l~~~p~~R~~~~----~l~~~~ 215 (215)
T cd00180 195 RKMLQKDPEKRPSAK----EILEHL 215 (215)
T ss_pred HHHhhCCcccCcCHH----HHhhCC
Confidence 999999999999987 888774
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=242.48 Aligned_cols=238 Identities=27% Similarity=0.375 Sum_probs=181.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccc-eeecC
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYA-EFEAS 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~-~~~~~ 161 (489)
+.|.+.+.||+|.||.+-+|++++ ++..+++|.+.+...... .|.+|...--.| .|.||+.-|+ .|+..
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~-----s~t~ivlKavp~p~tt~~----dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~ 94 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQ-----SKTRIVLKAVPRPQTTQA----DFVREFHYSFFLSPHQHIIDTYEVAFQTS 94 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccC-----CceEEEeeccCcchhhHH----HHHHHhccceeeccchhhhHHHHHHhhcC
Confidence 789999999999999999999998 678899999988765544 445565544344 4889998887 57888
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEec--cCCcEEEcccCCCc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVR--EDGHIMLSDFDLSF 239 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~--~~~~vkl~DFG~a~ 239 (489)
+.++++|||++-|+|..-+.. ..+.+...+.++.|++.||.|||++++||||||.+||||- +..+|||||||+.+
T Consensus 95 d~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 95 DAYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred ceEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccc
Confidence 899999999999999776544 4588999999999999999999999999999999999995 34589999999974
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.....-
T Consensus 172 k~g~tV-------------------------------------------------------------------------- 177 (378)
T KOG1345|consen 172 KVGTTV-------------------------------------------------------------------------- 177 (378)
T ss_pred ccCcee--------------------------------------------------------------------------
Confidence 321100
Q ss_pred cccccCCccccCCCCccCcchhcC---CC--CCCcccHHHHHHHHHHHhhCCCCCCCCC----cHHHHHHHhc-CCCCCC
Q 011302 320 EPINARSKSFVGTHEYLAPEVISG---QG--HGSAVDWWTLGVFLYEMLYGTTPFKGEN----NEKTLINILK-KPLTFP 389 (489)
Q Consensus 320 ~~~~~~~~~~~Gt~~y~aPE~l~~---~~--~~~~~DiwSlGvil~elltG~~Pf~~~~----~~~~~~~i~~-~~~~~p 389 (489)
...--+..|.+||++.. .. ..+.+|||.||+++|.++||.+||.... ..-.+.++.. .....|
T Consensus 178 -------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P 250 (378)
T KOG1345|consen 178 -------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALP 250 (378)
T ss_pred -------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCc
Confidence 01123456899998643 22 3778999999999999999999997432 1222333333 223444
Q ss_pred CCCCCCchhHHHHhhHHHHHHHHhhcCcccc
Q 011302 390 RIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 420 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 420 (489)
.....-.+ .+..+.++-|..++++|
T Consensus 251 ~~F~~fs~------~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 251 KKFNPFSE------KALRLFKKSLTPRFKDR 275 (378)
T ss_pred hhhcccCH------HHHHHHHHhcCCccccc
Confidence 43333332 48899999999999999
No 406
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.97 E-value=1.4e-31 Score=281.68 Aligned_cols=256 Identities=36% Similarity=0.659 Sum_probs=196.7
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.++|..++.|..|+||.||+++++. +.+.+|+| +++..+..++ ++.....|++|
T Consensus 82 e~df~~IklisngAygavylvrh~~-----trqrfa~k-iNkq~lilRn----------ilt~a~npfvv---------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKE-----TRQRFAMK-INKQNLILRN----------ILTFAGNPFVV---------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccc-----cccchhhc-ccccchhhhc----------cccccCCccee----------
Confidence 4789999999999999999999987 56788994 4544333222 44455566655
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
||-..+++.. +.++. +++.+++|||+.||+|||+||+|.||+.-|++|+.|||+++.--
T Consensus 136 -----------gDc~tllk~~--g~lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 136 -----------GDCATLLKNI--GPLPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred -----------chhhhhcccC--CCCcc--------hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhh
Confidence 5555555543 33443 33889999999999999999999999999999999999973211
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
. ..++. +.++.......
T Consensus 195 m--------------------------------------------------s~atn-------------l~eg~I~k~t~ 211 (1205)
T KOG0606|consen 195 M--------------------------------------------------SLATN-------------LKEGHIEKDTH 211 (1205)
T ss_pred h--------------------------------------------------hccch-------------hhhcchHHHHH
Confidence 0 00000 00000000000
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~ 402 (489)
.-....+||||.|+|||++..++|+..+|||++|+|+||.+.|..||.|++..+++...+...+.+|+.......
T Consensus 212 Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~----- 286 (1205)
T KOG0606|consen 212 EFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPP----- 286 (1205)
T ss_pred HhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCH-----
Confidence 112356799999999999999999999999999999999999999999999999999999988888876544443
Q ss_pred hhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
+++++|.++|+.+|..|.... +.-++++|+||+.+||.-|..++.+++|..
T Consensus 287 -Ea~dli~~LL~qnp~~Rlgt~-ga~evk~h~ff~~LDw~~llRqkaefvpql 337 (1205)
T KOG0606|consen 287 -EAQDLIEQLLRQNPLCRLGTG-GALEVKQHGFFQLLDWKSLLRQKAEFVPQL 337 (1205)
T ss_pred -HHHHHHHHHHHhChHhhcccc-hhhhhhhccceeecccchhhhhhccccccc
Confidence 599999999999999999986 445999999999999998878888877765
No 407
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.9e-30 Score=272.24 Aligned_cols=274 Identities=26% Similarity=0.333 Sum_probs=199.3
Q ss_pred eeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEE
Q 011302 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCL 166 (489)
Q Consensus 87 ~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 166 (489)
...+.+|.|++|.|+.+...........+.+++| .. ...........+..|..+-..+.|||++..+..+.+....+-
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~-~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~ 398 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VK-PTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQ 398 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcc-cC-CcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchh
Confidence 4567899999998888887764333333444443 21 111112222236668888888999999999888887777777
Q ss_pred EEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCcc
Q 011302 167 VMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPK 246 (489)
Q Consensus 167 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 246 (489)
+||||++ +|+.++... +.++..++..++.|++.||+|||+.||.|||||++|+|+..+|.+||+|||.+..+...-+
T Consensus 399 ~mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 399 SMEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 7999999 999998875 5799999999999999999999999999999999999999999999999999744321100
Q ss_pred ccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCC
Q 011302 247 LLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARS 326 (489)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (489)
. .....
T Consensus 476 ~--------------------------------------------------------------------------~~~~~ 481 (601)
T KOG0590|consen 476 K--------------------------------------------------------------------------NIHES 481 (601)
T ss_pred h--------------------------------------------------------------------------hhhhh
Confidence 0 00123
Q ss_pred ccccCCCCccCcchhcCCCCC-CcccHHHHHHHHHHHhhCCCCCCCCCcHHHH-HHHhcCCCCCCCCCCCCchhHHHHhh
Q 011302 327 KSFVGTHEYLAPEVISGQGHG-SAVDWWTLGVFLYEMLYGTTPFKGENNEKTL-INILKKPLTFPRIGVSSSKEFEEVVK 404 (489)
Q Consensus 327 ~~~~Gt~~y~aPE~l~~~~~~-~~~DiwSlGvil~elltG~~Pf~~~~~~~~~-~~i~~~~~~~p~~~~~~~~~~~~~~~ 404 (489)
..++|+..|+|||++.+..|+ ..+||||.|++++.|++|+.||.-....+.. ...... -.+.....+....-.....
T Consensus 482 ~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lp~~ 560 (601)
T KOG0590|consen 482 SGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYS-DQRNIFEGPNRLLSLLPRE 560 (601)
T ss_pred cCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccc-cccccccChHHHHHhchhh
Confidence 567899999999999999985 5789999999999999999999754433221 111110 0000101111111112234
Q ss_pred HHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcccc
Q 011302 405 LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 444 (489)
Q Consensus 405 l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~ 444 (489)
.+.+|.+||+.||.+|.++. +|++.+||+.++-+..
T Consensus 561 ~~~~~~~~l~~~P~~R~ti~----~i~~d~W~~~i~~c~v 596 (601)
T KOG0590|consen 561 TRIIIYRMLQLDPTKRITIE----QILNDEWIRSIECCHV 596 (601)
T ss_pred HHHHHHHHccCChhheecHH----HHhhChHhhhcceEEe
Confidence 68999999999999999998 9999999999876543
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=6e-29 Score=224.85 Aligned_cols=168 Identities=21% Similarity=0.181 Sum_probs=128.3
Q ss_pred CchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcch
Q 011302 174 GDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLS 253 (489)
Q Consensus 174 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~ 253 (489)
|+|.+++... +..+++.+++.|+.||+.||.|||+++ ||+|||++.++.+|+ ||++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~---------- 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP---------- 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc----------
Confidence 7899998764 356999999999999999999999998 999999999999999 998732110
Q ss_pred hHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCC
Q 011302 254 FEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTH 333 (489)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~ 333 (489)
....||+
T Consensus 62 -------------------------------------------------------------------------~~~~g~~ 68 (176)
T smart00750 62 -------------------------------------------------------------------------EQSRVDP 68 (176)
T ss_pred -------------------------------------------------------------------------ccCCCcc
Confidence 0115889
Q ss_pred CccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH-HHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHH
Q 011302 334 EYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE-KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKL 412 (489)
Q Consensus 334 ~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~ 412 (489)
.|||||++.+..++.++|||||||++|||++|+.||...... ..+..+.................+.....+.+||.+|
T Consensus 69 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~c 148 (176)
T smart00750 69 YFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVC 148 (176)
T ss_pred cccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHH
Confidence 999999999999999999999999999999999999765443 2333333322111111111111111112589999999
Q ss_pred hhcCcccccCCCCChHHHHcCCCcC
Q 011302 413 LVKNPKKRIGSLKGSVEIKRHEFFK 437 (489)
Q Consensus 413 L~~dP~~R~~~~~~~~~ll~hp~f~ 437 (489)
|..||.+||++. ++++|+|+.
T Consensus 149 l~~~p~~Rp~~~----~ll~~~~~~ 169 (176)
T smart00750 149 ASRLPQRREAAN----HYLAHCRAL 169 (176)
T ss_pred HhcccccccCHH----HHHHHHHHH
Confidence 999999999997 999999874
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.96 E-value=2.9e-28 Score=227.27 Aligned_cols=218 Identities=23% Similarity=0.380 Sum_probs=180.4
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCc
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASH 162 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~ 162 (489)
-.|++.++||+|+||+.+.|+..- .++.||||.-.... ..-++..|-...+.|. .++|...|.+...+.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~-----nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~ 97 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLY-----NNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGK 97 (449)
T ss_pred ccceeccccccCcceeeecccccc-----cCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccc
Confidence 379999999999999999998764 67899999865432 2233444777777775 799999998888998
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC-----cEEEcccCC
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG-----HIMLSDFDL 237 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~-----~vkl~DFG~ 237 (489)
+-.||||++ |.+|+|+..-. +++|+...+..++.|++.-++|+|++.+|.|||||+|+||+..+ .+.|+|||+
T Consensus 98 ~NiLVidLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 98 YNILVIDLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred hhhhhhhhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 999999999 99999998876 47899999999999999999999999999999999999998544 489999999
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
|+.+... .+
T Consensus 176 AK~YrDp-----------------------------------------------------------------------~T 184 (449)
T KOG1165|consen 176 AKEYRDP-----------------------------------------------------------------------KT 184 (449)
T ss_pred hhhhcCc-----------------------------------------------------------------------cc
Confidence 9665432 12
Q ss_pred cccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCC---CcHHHHHHHhcC
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKK 384 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~---~~~~~~~~i~~~ 384 (489)
..++..+...++.||..||+-...+|...+.+-|+=|||-++++.|-|..||.|. +..+-+++|-..
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~ 254 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGET 254 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccc
Confidence 2333445667789999999999999999999999999999999999999999875 445556666543
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.95 E-value=1.8e-26 Score=226.96 Aligned_cols=268 Identities=38% Similarity=0.542 Sum_probs=203.8
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCC-CcccccceeecCceE
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP-FLPTLYAEFEASHYS 164 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp-nIv~l~~~~~~~~~~ 164 (489)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|..++..+.|+ +|+++++.+......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEE
Confidence 788899999999999999977 46799999877655434566788899999999988 799999999888889
Q ss_pred EEEEeecCCCchHHHHHhCCC-CCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC-cEEEcccCCCcccc
Q 011302 165 CLVMEYCPGGDLYAARQRQPG-KRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG-HIMLSDFDLSFKCD 242 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~-~vkl~DFG~a~~~~ 242 (489)
+++++++.+++|.+++..... ..+....+..++.|++.++.|+|+.+++||||||+|||++..+ .++++|||++..+.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~ 153 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP 153 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence 999999999999976665421 2689999999999999999999999999999999999999988 79999999984221
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
....... .
T Consensus 154 ~~~~~~~------------------------------------------------------------------------~ 161 (384)
T COG0515 154 DPGSTSS------------------------------------------------------------------------I 161 (384)
T ss_pred CCCcccc------------------------------------------------------------------------c
Confidence 1000000 0
Q ss_pred ccCCccccCCCCccCcchhcC---CCCCCcccHHHHHHHHHHHhhCCCCCCCCCc----HHHHHHHhcCCCC-CCCCCCC
Q 011302 323 NARSKSFVGTHEYLAPEVISG---QGHGSAVDWWTLGVFLYEMLYGTTPFKGENN----EKTLINILKKPLT-FPRIGVS 394 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~~~-~p~~~~~ 394 (489)
.......+||..|+|||.+.+ ..+....|+||+|++++++++|..||..... ......+...... .......
T Consensus 162 ~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (384)
T COG0515 162 PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSP 241 (384)
T ss_pred cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCc
Confidence 012345689999999999998 5688999999999999999999999887764 3444444333322 1111111
Q ss_pred CchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 395 SSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 395 ~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
... ......+.+++.+++..+|..|.+.. +...++|...
T Consensus 242 ~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~----~~~~~~~~~~ 280 (384)
T COG0515 242 SNP-ELISKAASDLLKKLLAKDPKNRLSSS----SDLSHDLLAH 280 (384)
T ss_pred ccc-chhhHHHHHHHHHHHhcCchhcCCHH----HHhhchHhhC
Confidence 100 11112478999999999999999987 5555555433
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-26 Score=229.99 Aligned_cols=258 Identities=24% Similarity=0.331 Sum_probs=190.7
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCC----CCccccccee-e
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH----PFLPTLYAEF-E 159 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----pnIv~l~~~~-~ 159 (489)
+|.+.+.||+|+||.||+|.+.... ...+|+|+........ ...+..|..++..+.. .++..+++.. .
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~----~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~ 91 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEK----NKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRS 91 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCC----CeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccC
Confidence 8999999999999999999988632 4678999987643221 1145568888888863 6899999999 5
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC-----CcEEEcc
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED-----GHIMLSD 234 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~-----~~vkl~D 234 (489)
.+..-|+||+++ |.+|.++....+.+.|+...+..|+.|++.+|++||+.|+|||||||+|++++.. ..+.|.|
T Consensus 92 ~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 92 TEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred CCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 888899999999 9999999877767889999999999999999999999999999999999999865 4699999
Q ss_pred cCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCC
Q 011302 235 FDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDD 314 (489)
Q Consensus 235 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (489)
||+|+.+.......
T Consensus 171 fGlar~~~~~~~~~------------------------------------------------------------------ 184 (322)
T KOG1164|consen 171 FGLARRFKYVGDSG------------------------------------------------------------------ 184 (322)
T ss_pred cCCCccccccCCCC------------------------------------------------------------------
Confidence 99997433211100
Q ss_pred ccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCC--CC
Q 011302 315 PEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR--IG 392 (489)
Q Consensus 315 ~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~~ 392 (489)
.. ..+.......+.||..|+++.+..+...+.+.|+||++-++.||+.|..||.+........++......... ..
T Consensus 185 -~~-~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (322)
T KOG1164|consen 185 -GN-LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFG 262 (322)
T ss_pred -cc-cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhcccccc
Confidence 00 000000123457999999999999999999999999999999999999999776643322222221111110 01
Q ss_pred CCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 393 VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 393 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
.... ..+.++...+-..+...+|...
T Consensus 263 ~~~~------~~~~~~~~~~~~~~~~~~Pdy~ 288 (322)
T KOG1164|consen 263 DLKP------EEFAKILEYIDSLDYEDKPDYE 288 (322)
T ss_pred CCCh------HHHHHHHHHhhccCCcCCCCHH
Confidence 1111 1355666666667778888764
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=3.5e-27 Score=211.10 Aligned_cols=224 Identities=22% Similarity=0.336 Sum_probs=182.8
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCC-CCcccccceee
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH-PFLPTLYAEFE 159 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~ 159 (489)
+..+.|+++++||+|+||.+|+|.... .+..||||+-... ....++..|..+.+.|++ ..|..+..++.
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~-----~ge~VAiK~Es~~-----a~hpqL~yEskvY~iL~~g~GiP~i~~y~~ 81 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISIT-----SGEEVAIKLESSK-----AKHPQLLYESKVYRILQGGVGIPHIRHYGT 81 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeecc-----CCceEEEEeeccc-----CCCcchhHHHHHHHHhccCCCCchhhhhcc
Confidence 445799999999999999999999886 6789999987543 223345668888888875 67888888888
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC---CcEEEcccC
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED---GHIMLSDFD 236 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~---~~vkl~DFG 236 (489)
+..+-.|||+++ |.+|.++..... ++|+..++..++-|++.-|+|+|.+++|||||||+|+|.+-+ ..+.|+|||
T Consensus 82 e~~ynvlVMdLL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG 159 (341)
T KOG1163|consen 82 EKDYNVLVMDLL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFG 159 (341)
T ss_pred ccccceeeeecc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEecc
Confidence 888999999999 999999988663 679999999999999999999999999999999999999754 458999999
Q ss_pred CCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcc
Q 011302 237 LSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPE 316 (489)
Q Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (489)
+|+++.....
T Consensus 160 LaKky~d~~t---------------------------------------------------------------------- 169 (341)
T KOG1163|consen 160 LAKKYRDIRT---------------------------------------------------------------------- 169 (341)
T ss_pred chhhhccccc----------------------------------------------------------------------
Confidence 9976543211
Q ss_pred ccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcH---HHHHHHhcCCCC
Q 011302 317 VVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE---KTLINILKKPLT 387 (489)
Q Consensus 317 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~~~i~~~~~~ 387 (489)
..+...+....+.||..|.+-....+...+..-|+=|+|-+|.++.-|..||.|.... +-.++|......
T Consensus 170 -~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s 242 (341)
T KOG1163|consen 170 -RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMS 242 (341)
T ss_pred -cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcC
Confidence 1122334556778999999999988888899999999999999999999999986543 445556554443
No 413
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=5.5e-27 Score=232.72 Aligned_cols=144 Identities=24% Similarity=0.164 Sum_probs=113.8
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHH--HHHHHHHHHHHHHHHHHhCCCCCccc-ccce
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEKVILTMLDHPFLPT-LYAE 157 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~-l~~~ 157 (489)
...++|.+.+.||+|+||+||+|.++.. ++..||||++..... ........+.+|+.+|+.++|+||++ +++.
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~----~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~ 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGD----PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCC----CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc
Confidence 4457899999999999999999987742 356689998753211 11223455788999999999999985 4432
Q ss_pred eecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecC-CCCCeEeccCCcEEEcccC
Q 011302 158 FEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDL-KPENVLVREDGHIMLSDFD 236 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDI-Kp~NILl~~~~~vkl~DFG 236 (489)
+..|||||||+|++|... .. .. ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||
T Consensus 91 ----~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred ----CCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 457999999999999632 11 11 1467899999999999999999999 9999999999999999999
Q ss_pred CCccc
Q 011302 237 LSFKC 241 (489)
Q Consensus 237 ~a~~~ 241 (489)
+|+.+
T Consensus 158 lA~~~ 162 (365)
T PRK09188 158 LASVF 162 (365)
T ss_pred cceec
Confidence 98554
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.91 E-value=2.3e-24 Score=199.45 Aligned_cols=139 Identities=19% Similarity=0.176 Sum_probs=113.3
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHH------HHHHHHHHHhCCCCCccccc
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHR------ADMEKVILTMLDHPFLPTLY 155 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~------~~~E~~~l~~l~hpnIv~l~ 155 (489)
-.++|++++.||.|+||.||++... ...+|||++..+.........+ +.+|+..+.++.|++|..+.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~-------~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~ 101 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTD-------YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLN 101 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecC-------CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcce
Confidence 3479999999999999999997653 2458999997655443343333 57898899999999999999
Q ss_pred ceeecC--------ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC
Q 011302 156 AEFEAS--------HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED 227 (489)
Q Consensus 156 ~~~~~~--------~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~ 227 (489)
+++... ...||||||++|.+|.++.. +++ ..+.+++.+|..||..|++||||||.|||++.+
T Consensus 102 d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~ 171 (232)
T PRK10359 102 DFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKN 171 (232)
T ss_pred EeeeecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCC
Confidence 886533 35899999999999977632 332 246699999999999999999999999999999
Q ss_pred CcEEEcccCCC
Q 011302 228 GHIMLSDFDLS 238 (489)
Q Consensus 228 ~~vkl~DFG~a 238 (489)
| ++|+|||..
T Consensus 172 g-i~liDfg~~ 181 (232)
T PRK10359 172 G-LRIIDLSGK 181 (232)
T ss_pred C-EEEEECCCc
Confidence 8 999999986
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=2.7e-24 Score=196.43 Aligned_cols=141 Identities=21% Similarity=0.200 Sum_probs=108.0
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHH-----------------------HHHHHHHHHHHHHh
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-----------------------KLHRADMEKVILTM 145 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~~ 145 (489)
...||+|+||.||+|.+. +++.||||+++........ .......|..+|..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~------~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 75 (190)
T cd05147 2 NGCISTGKEANVYHATTA------NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKR 75 (190)
T ss_pred CCccccccceEEEEEECC------CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 467999999999999875 3678999999764321100 01123458899999
Q ss_pred CCCCCcccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHH-HhCCCeeecCCCCCeEe
Q 011302 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYL-HMMGIVYRDLKPENVLV 224 (489)
Q Consensus 146 l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yL-H~~~iiHrDIKp~NILl 224 (489)
+.+++|.....+ .... .||||||++|++|...+... ..+++..+..++.|++.+|.|| |+.||+||||||+|||+
T Consensus 76 l~~~~v~~p~~~-~~~~-~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli 151 (190)
T cd05147 76 LVTAGIPCPEPI-LLKS-HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY 151 (190)
T ss_pred HHHCCCCCCcEE-EecC-CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence 988877443332 2222 38999999888776543332 5689999999999999999999 79999999999999999
Q ss_pred ccCCcEEEcccCCCcc
Q 011302 225 REDGHIMLSDFDLSFK 240 (489)
Q Consensus 225 ~~~~~vkl~DFG~a~~ 240 (489)
+ ++.++|+|||+|..
T Consensus 152 ~-~~~v~LiDFG~a~~ 166 (190)
T cd05147 152 H-DGKLYIIDVSQSVE 166 (190)
T ss_pred E-CCcEEEEEcccccc
Confidence 8 58899999999854
No 416
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.91 E-value=3.3e-25 Score=234.00 Aligned_cols=243 Identities=22% Similarity=0.330 Sum_probs=178.4
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHH--HHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA--LAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
+|...+.||++.|=+|.+|++++ ..|.||++-+.. ...+...+++. |+. ...++|||++++.-+-..+.
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-------G~vVvKVFvk~~p~~sL~~~~qrL~-~ik-~~l~~~pn~lPfqk~~~t~k 94 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-------GLVVVKVFVKQDPTISLRPFKQRLE-EIK-FALMKAPNCLPFQKVLVTDK 94 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-------ceEEEEEEeccCCCCCchHHHHHHH-HHH-HHhhcCCcccchHHHHHhhH
Confidence 78889999999999999999886 348899986543 33334444443 333 55678999999999888888
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..|||-+|. .-+|+|.+..++ -+...+.+.|+.||+.||.-+|..||+|+|||.|||||+.-..+.|+||.--+..
T Consensus 95 AAylvRqyv-khnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPt- 170 (1431)
T KOG1240|consen 95 AAYLVRQYV-KHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPT- 170 (1431)
T ss_pred HHHHHHHHH-hhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCc-
Confidence 999999999 679999987763 4777888999999999999999999999999999999999999999999853211
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..|+..+.+.+ .+| .
T Consensus 171 YLPeDNPadf~-----------------------fFF-D----------------------------------------- 185 (1431)
T KOG1240|consen 171 YLPEDNPADFT-----------------------FFF-D----------------------------------------- 185 (1431)
T ss_pred cCCCCCcccce-----------------------EEE-e-----------------------------------------
Confidence 11111111000 000 0
Q ss_pred ccCCccccCCCCccCcchhcCC----------C-CCCcccHHHHHHHHHHHhh-CCCCCCC----------C-CcHHHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQ----------G-HGSAVDWWTLGVFLYEMLY-GTTPFKG----------E-NNEKTLI 379 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~----------~-~~~~~DiwSlGvil~ellt-G~~Pf~~----------~-~~~~~~~ 379 (489)
.. .--.+|+|||.+... + .+++.||||+||+++||++ |++||.- . +....++
T Consensus 186 -TS----rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le 260 (1431)
T KOG1240|consen 186 -TS----RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLE 260 (1431)
T ss_pred -cC----CceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHH
Confidence 00 112369999998542 2 4678999999999999997 7999842 1 1122222
Q ss_pred HHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcC
Q 011302 380 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 433 (489)
Q Consensus 380 ~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~h 433 (489)
+|.. ..++.||..|+++||.+|+++. +.|+-
T Consensus 261 ~Ied-------------------~~~Rnlil~Mi~rdPs~RlSAe----dyL~~ 291 (1431)
T KOG1240|consen 261 KIED-------------------VSLRNLILSMIQRDPSKRLSAE----DYLQK 291 (1431)
T ss_pred hCcC-------------------ccHHHHHHHHHccCchhccCHH----HHHHh
Confidence 2211 1388999999999999999997 66654
No 417
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=2.4e-23 Score=188.57 Aligned_cols=203 Identities=21% Similarity=0.239 Sum_probs=140.2
Q ss_pred eeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHH-HHHHHHHHHHHHHhCC-CCCcccccceeecCceE
Q 011302 87 RLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-KLHRADMEKVILTMLD-HPFLPTLYAEFEASHYS 164 (489)
Q Consensus 87 ~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~-~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~ 164 (489)
.+...|++|+||+||++... ...++.+.+.....-.+. ....+.+|+.+|++|+ |++|++++++ +..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~-------~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGG-------ERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeecC-------CceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCE
Confidence 35678999999999977642 345565655544332221 2235778999999995 5889999885 346
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecC-CCCCeEeccCCcEEEcccCCCccccc
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDL-KPENVLVREDGHIMLSDFDLSFKCDV 243 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDI-Kp~NILl~~~~~vkl~DFG~a~~~~~ 243 (489)
|++|||+.|.+|.+.+.. ....++.|++.+|++||++||||||| ||+|||++.+|.++|+|||+|.....
T Consensus 74 ~lvmeyI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP 144 (218)
T ss_pred EEEEeeecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence 999999999999654321 11357889999999999999999999 79999999999999999999853322
Q ss_pred CccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccccccc
Q 011302 244 VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPIN 323 (489)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (489)
..... .-+-..++...
T Consensus 145 ~~~~~-r~L~~rDl~~l--------------------------------------------------------------- 160 (218)
T PRK12274 145 RARWM-RLLAREDLRHL--------------------------------------------------------------- 160 (218)
T ss_pred cchHH-HHHHHHHHHHH---------------------------------------------------------------
Confidence 11000 00000000000
Q ss_pred cCCccccCCCCccCcchhcCC-CCC-CcccHHHHHHHHHHHhhCCCCCCCCCc
Q 011302 324 ARSKSFVGTHEYLAPEVISGQ-GHG-SAVDWWTLGVFLYEMLYGTTPFKGENN 374 (489)
Q Consensus 324 ~~~~~~~Gt~~y~aPE~l~~~-~~~-~~~DiwSlGvil~elltG~~Pf~~~~~ 374 (489)
...-...++.|+.|+.-.-. ..+ ...++++.|+.+|.++|+..++.++++
T Consensus 161 -lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 161 -LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred -HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 00111367889999875432 223 578999999999999999999876653
No 418
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.90 E-value=3.2e-24 Score=226.46 Aligned_cols=314 Identities=29% Similarity=0.446 Sum_probs=239.5
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeec
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEA 160 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 160 (489)
...+++.+++-+-+|+|+.++.+.-.. .+...++|+.........+..+....+..++-...+|.++.....+..
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~-----sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~ 875 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAG-----SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC 875 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccc-----cccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC
Confidence 455788888899999999999887665 455667777765544444445555556666655677889988888888
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
....+|||+|+.|++|...++.. +..+.+-++.++..++.+++|||...++|||+||.|+|+..+|+.++.|||....
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~--~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNS--GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSK 953 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcC--CCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccc
Confidence 88999999999999999988776 4678888899999999999999999999999999999999999999999997543
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
....+...... .+....+... ...+.. +.+ ...
T Consensus 954 vg~~~p~~~~s---------------------g~~~~~~~~~-~~~~~~---------~~~----------------l~~ 986 (1205)
T KOG0606|consen 954 VGLIPPTTDLS---------------------GPSSSGTPRR-LSRSER---------RPQ----------------LSA 986 (1205)
T ss_pred cccccCcCCcc---------------------cccccCcccc-cccccc---------ccc----------------ccc
Confidence 32221111000 0000000000 000000 000 000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFE 400 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ 400 (489)
....+.....||+.|.+||.+.+...+..+|+|++|++++|.++|.+||......+.+..|......+|........
T Consensus 987 ~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~--- 1063 (1205)
T KOG0606|consen 987 DEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSY--- 1063 (1205)
T ss_pred chhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccCh---
Confidence 01234567789999999999999999999999999999999999999999999999999999998888876555443
Q ss_pred HHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCccccccCCCCCCCCc
Q 011302 401 EVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRSIKPPEVPNN 455 (489)
Q Consensus 401 ~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~~~~~~~~p~~~~~ 455 (489)
.+++++.++|..+|.+|.++. +..++..|+||+.++|+.+...+.+++|..
T Consensus 1064 ---~aq~~~~~ll~~~~~qr~~a~-~~~e~k~~~~~~~~~~~~l~~q~~~~~p~~ 1114 (1205)
T KOG0606|consen 1064 ---EAQDLINRLLTEEPTQRLGAK-GAAEVKGHPFFQDVDWENLALQKAEFVPQP 1114 (1205)
T ss_pred ---hhhhhhhhhhccCchhccCcc-cccccccCCccCCCCccccccccCccCCCC
Confidence 489999999999999999985 455899999999999999988887777664
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.90 E-value=4.8e-23 Score=188.71 Aligned_cols=143 Identities=21% Similarity=0.203 Sum_probs=109.9
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH-----------------------HHHHHHHHHHHHHHHh
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-----------------------RKKLHRADMEKVILTM 145 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~~ 145 (489)
.+.||+|+||.||+|.+. +++.||||+++...... .........|...+.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~------~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 75 (190)
T cd05145 2 NGCISTGKEANVYHARTG------DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKR 75 (190)
T ss_pred CceeecCCCcEEEEEEcC------CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999999865 36789999998642110 0011234578899999
Q ss_pred CCCCCcccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEe
Q 011302 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLV 224 (489)
Q Consensus 146 l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl 224 (489)
+.|++|.....+.... .||||||++|+++....... ..++..++..++.|++.+|.+||+ +||+||||||+|||+
T Consensus 76 l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll 151 (190)
T cd05145 76 LYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY 151 (190)
T ss_pred HHhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE
Confidence 9999875444433332 48999999888654332222 467888999999999999999999 999999999999999
Q ss_pred ccCCcEEEcccCCCcccc
Q 011302 225 REDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 225 ~~~~~vkl~DFG~a~~~~ 242 (489)
+ ++.++|+|||+|....
T Consensus 152 ~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 152 H-DGKPYIIDVSQAVELD 168 (190)
T ss_pred E-CCCEEEEEcccceecC
Confidence 9 8999999999996554
No 420
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.89 E-value=2.4e-23 Score=198.30 Aligned_cols=236 Identities=24% Similarity=0.301 Sum_probs=144.4
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCC----------CCcccc
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH----------PFLPTL 154 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----------pnIv~l 154 (489)
.+...+.||.|+|+.||.+++.. +++.+|+|++........+..+.+.+|......+.+ -.++.-
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~-----t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P 87 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVE-----TGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVP 87 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT-----TTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred EEEEccccccCCceEEEEEEEcc-----CCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEee
Confidence 45677899999999999999998 689999999854333333444555555533333221 111111
Q ss_pred cc---------eeecC---c-----eEEEEEeecCCCchHHHHHh---CCCC--CCChhhHHHHHHHHHHHHHHHHhCCC
Q 011302 155 YA---------EFEAS---H-----YSCLVMEYCPGGDLYAARQR---QPGK--RFGISSAKFYAAETLLALEYLHMMGI 212 (489)
Q Consensus 155 ~~---------~~~~~---~-----~~~lV~E~~~gg~L~~~l~~---~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~i 212 (489)
++ ++... . +.+++|+-+ -++|.+++.- .... .+.......+..|++..+++||..||
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl 166 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL 166 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce
Confidence 11 11111 1 347888888 7888776542 2111 12222234455899999999999999
Q ss_pred eeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCcccccccccccccccccc
Q 011302 213 VYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKA 292 (489)
Q Consensus 213 iHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (489)
||+||||+|++++.+|.+.|+||+.......
T Consensus 167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~------------------------------------------------- 197 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGT------------------------------------------------- 197 (288)
T ss_dssp EEST-SGGGEEE-TTS-EEE--GGGEEETTE-------------------------------------------------
T ss_pred EecccceeeEEEcCCCCEEEcChHHHeecCc-------------------------------------------------
Confidence 9999999999999999999999987522100
Q ss_pred ccccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcC--------CCCCCcccHHHHHHHHHHHhh
Q 011302 293 VTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISG--------QGHGSAVDWWTLGVFLYEMLY 364 (489)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--------~~~~~~~DiwSlGvil~ellt 364 (489)
.......+..|.+||.... ..++.+.|.|+||+++|.|++
T Consensus 198 --------------------------------~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 198 --------------------------------RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp --------------------------------EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 0000134577999998744 246889999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccc
Q 011302 365 GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 420 (489)
Q Consensus 365 G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 420 (489)
|..||........... .|. .|. +.+..+++||++||++||++|
T Consensus 246 ~~lPf~~~~~~~~~~~------~f~--~C~-----~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW------DFS--RCR-----DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG------GGT--TSS--------HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc------cch--hcC-----CcCHHHHHHHHHHccCCcccC
Confidence 9999986643211110 111 111 112358999999999999998
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=2.2e-23 Score=198.90 Aligned_cols=203 Identities=21% Similarity=0.322 Sum_probs=142.5
Q ss_pred CCCCcccccceeec---------------------------CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHH
Q 011302 147 DHPFLPTLYAEFEA---------------------------SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAE 199 (489)
Q Consensus 147 ~hpnIv~l~~~~~~---------------------------~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~q 199 (489)
.|||||+++++|.+ +..+|+||... ..+|.+++-.+ ..+....+.|+.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~---~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR---HRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC---CCchHHHHHHHHH
Confidence 59999999998732 23589999988 57998888664 4667778899999
Q ss_pred HHHHHHHHHhCCCeeecCCCCCeEec--cCC--cEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCc
Q 011302 200 TLLALEYLHMMGIVYRDLKPENVLVR--EDG--HIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPV 275 (489)
Q Consensus 200 i~~~L~yLH~~~iiHrDIKp~NILl~--~~~--~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (489)
+++|+.|||.+||.|||+|.+||||. +|+ .+.|+|||.+-...... +
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hG--l--------------------------- 400 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHG--L--------------------------- 400 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccc--c---------------------------
Confidence 99999999999999999999999994 444 47899999863221100 0
Q ss_pred cccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCC------CCCc
Q 011302 276 LSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG------HGSA 349 (489)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~------~~~~ 349 (489)
.-+..+-.-...|.-.-||||+....+ --.+
T Consensus 401 -------------------------------------------qlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~k 437 (598)
T KOG4158|consen 401 -------------------------------------------QLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEK 437 (598)
T ss_pred -------------------------------------------ccccccccccCCCcceecchhhhhcCCCCceeeccch
Confidence 000011112335777899999986543 1358
Q ss_pred ccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHH
Q 011302 350 VDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVE 429 (489)
Q Consensus 350 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ 429 (489)
+|.|+.|.+.||+++...||++..+...-.+- ...-..|....... +.+++|+..+|+.||.+|++.. .++.
T Consensus 438 AD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-Yqe~qLPalp~~vp------p~~rqlV~~lL~r~pskRvsp~-iAAN 509 (598)
T KOG4158|consen 438 ADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-YQESQLPALPSRVP------PVARQLVFDLLKRDPSKRVSPN-IAAN 509 (598)
T ss_pred hhhhhhhhhHHHHhccCCcccccchheechhh-hhhhhCCCCcccCC------hHHHHHHHHHhcCCccccCCcc-HHHh
Confidence 99999999999999999999885432211111 11223333322222 2489999999999999999974 3335
Q ss_pred HHcC
Q 011302 430 IKRH 433 (489)
Q Consensus 430 ll~h 433 (489)
+++-
T Consensus 510 vl~L 513 (598)
T KOG4158|consen 510 VLNL 513 (598)
T ss_pred HHHH
Confidence 5543
No 422
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=4.9e-23 Score=187.50 Aligned_cols=241 Identities=17% Similarity=0.284 Sum_probs=188.5
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecC
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
...+..++.+|.+..-|+.|+|++.+. -++.|+++...... ...+.|..|.-.|+.+.||||+.+++.|...
T Consensus 188 d~~~lnl~tkl~e~hsgelwrgrwqgn-------divakil~vr~~t~-risrdfneefp~lrifshpnilpvlgacnsp 259 (448)
T KOG0195|consen 188 DVSSLNLITKLAESHSGELWRGRWQGN-------DIVAKILNVREVTA-RISRDFNEEFPALRIFSHPNILPVLGACNSP 259 (448)
T ss_pred chhhhhhhhhhccCCCcccccccccCc-------chhhhhhhhhhcch-hhcchhhhhCcceeeecCCchhhhhhhccCC
Confidence 345556777899999999999999873 23567766554432 3456678888889999999999999999999
Q ss_pred ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCC-C-eeecCCCCCeEeccCCcEEE--cccCC
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMG-I-VYRDLKPENVLVREDGHIML--SDFDL 237 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~-i-iHrDIKp~NILl~~~~~vkl--~DFG~ 237 (489)
.++.++..||+.|+|+.+++...+-..+..++..++.+|+.|++|||+.. + ----|....++||++.+.+| +|--+
T Consensus 260 pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kf 339 (448)
T KOG0195|consen 260 PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKF 339 (448)
T ss_pred CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheeccccee
Confidence 99999999999999999998876666778899999999999999999875 3 34468889999999987665 34333
Q ss_pred CcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccc
Q 011302 238 SFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEV 317 (489)
Q Consensus 238 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (489)
++.+
T Consensus 340 sfqe---------------------------------------------------------------------------- 343 (448)
T KOG0195|consen 340 SFQE---------------------------------------------------------------------------- 343 (448)
T ss_pred eeec----------------------------------------------------------------------------
Confidence 2110
Q ss_pred cccccccCCccccCCCCccCcchhcCCCCC---CcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC--CCCCC
Q 011302 318 VAEPINARSKSFVGTHEYLAPEVISGQGHG---SAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT--FPRIG 392 (489)
Q Consensus 318 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~---~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~--~p~~~ 392 (489)
.+..-.|.||+||.+...+-+ .++|+|||+++||||.|.+.||....+.+.-.+|.-..+. +|...
T Consensus 344 ---------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgi 414 (448)
T KOG0195|consen 344 ---------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGI 414 (448)
T ss_pred ---------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCc
Confidence 111346889999999887643 4799999999999999999999999888876666544433 33222
Q ss_pred CCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 393 VSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 393 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
. ..+..|+.-|++.||.+||.+.
T Consensus 415 s---------~hm~klm~icmnedpgkrpkfd 437 (448)
T KOG0195|consen 415 S---------RHMNKLMNICMNEDPGKRPKFD 437 (448)
T ss_pred c---------HHHHHHHHHHhcCCCCcCCCcc
Confidence 1 1478999999999999999985
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.87 E-value=1.1e-21 Score=181.04 Aligned_cols=135 Identities=21% Similarity=0.208 Sum_probs=103.8
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-----CCCCcccccceeecCc-
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-----DHPFLPTLYAEFEASH- 162 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~~~- 162 (489)
.+.||+|+||.||. +.. ... .+||++...... ..+.+.+|+.+++.+ +||||++++++++++.
T Consensus 7 ~~~LG~G~~~~Vy~--hp~-----~~~-k~IKv~~~~~~~---~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g 75 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPE-----DAQ-RCIKIVYHRGDG---GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG 75 (210)
T ss_pred cceecCCCceEEEE--CCC-----CcC-eEEEEEeccccc---hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC
Confidence 46899999999995 333 222 368988654221 234577899999999 6799999999998763
Q ss_pred --eEE-EEEee--cCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHH-HHHHhCCCeeecCCCCCeEeccC----CcEEE
Q 011302 163 --YSC-LVMEY--CPGGDLYAARQRQPGKRFGISSAKFYAAETLLAL-EYLHMMGIVYRDLKPENVLVRED----GHIML 232 (489)
Q Consensus 163 --~~~-lV~E~--~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L-~yLH~~~iiHrDIKp~NILl~~~----~~vkl 232 (489)
.+| +|||| +.+|+|.+++.+. .+++. ..++.|++.++ +|||+++||||||||+|||++.. +.++|
T Consensus 76 ~g~v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 76 TGYVYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred CeEEEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEE
Confidence 434 78999 5579999999653 36655 45688888888 99999999999999999999743 47999
Q ss_pred cccCCCc
Q 011302 233 SDFDLSF 239 (489)
Q Consensus 233 ~DFG~a~ 239 (489)
+||+.+.
T Consensus 151 iDg~G~~ 157 (210)
T PRK10345 151 CDNIGES 157 (210)
T ss_pred EECCCCc
Confidence 9955443
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=3.2e-21 Score=207.74 Aligned_cols=198 Identities=26% Similarity=0.372 Sum_probs=155.9
Q ss_pred ccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC---CCCcccccc
Q 011302 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD---HPFLPTLYA 156 (489)
Q Consensus 80 ~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~ 156 (489)
++..+.|.|.+.||+|+||+||+|...+ ++.||+|+-+....- ++..=..++.+|. -+.|..+..
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~------~~~~alK~e~P~~~W------EfYI~~q~~~RLk~~~~~~~~~~~~ 761 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN------GKLVALKVEKPPNPW------EFYICLQVMERLKPQMLPSIMHISS 761 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC------CcEEEEEeecCCCce------eeeehHHHHHhhchhhhcchHHHHH
Confidence 4567889999999999999999999875 689999997542100 0000111222222 245666667
Q ss_pred eeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc-------CCc
Q 011302 157 EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE-------DGH 229 (489)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~-------~~~ 229 (489)
++.-.+..+||+||.+.|+|.++++.. +.+++..+..++.||+.-|+.||..+|||+||||+|+||.. ..-
T Consensus 762 a~~~~~~S~lv~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 762 AHVFQNASVLVSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred HHccCCcceeeeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccc
Confidence 666677789999999999999999854 67999999999999999999999999999999999999963 235
Q ss_pred EEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCc
Q 011302 230 IMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQ 309 (489)
Q Consensus 230 vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (489)
++|+|||-+..+...+..
T Consensus 840 l~lIDfG~siDm~lfp~~-------------------------------------------------------------- 857 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDG-------------------------------------------------------------- 857 (974)
T ss_pred eEEEecccceeeeEcCCC--------------------------------------------------------------
Confidence 899999998555433321
Q ss_pred cccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCC
Q 011302 310 ELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTT 367 (489)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~ 367 (489)
.+....++|-.+-++|++.|++|++.+|.|.|+.+++.||.|+.
T Consensus 858 --------------~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 858 --------------TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred --------------cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 12345578899999999999999999999999999999999864
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.84 E-value=1e-20 Score=178.67 Aligned_cols=146 Identities=24% Similarity=0.200 Sum_probs=110.9
Q ss_pred CceeeeeeccCCceeEEEEE-EccCCCCCCCeeEEEEeeehHHHH---------------------HHHHHHHHHHHHHH
Q 011302 85 HFRLLRRLGSGDIGNVYLCQ-IRNPMVGLPQCFYAMKVVDREALA---------------------IRKKLHRADMEKVI 142 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~-~~~~~~~~~~~~~aiK~~~~~~~~---------------------~~~~~~~~~~E~~~ 142 (489)
.|.+.+.||+|+||.||+|. +.. +++.||||+++..... .......+..|..+
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~-----~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 103 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDG-----SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRN 103 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCC-----CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHH
Confidence 58899999999999999998 333 4688999998753210 00011235679999
Q ss_pred HHhCCCCC--cccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCC-CeeecCCC
Q 011302 143 LTMLDHPF--LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMG-IVYRDLKP 219 (489)
Q Consensus 143 l~~l~hpn--Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDIKp 219 (489)
+.++.+.+ +.++++ .. ..||||||++|++|....... ..+...++..++.||+.+|.+||.+| |+||||||
T Consensus 104 L~~L~~~~i~~p~~~~---~~-~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp 177 (237)
T smart00090 104 LQRLYEAGVPVPKPIA---WR-RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSE 177 (237)
T ss_pred HHHHHhcCCCCCeeeE---ec-CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCCh
Confidence 99997533 334443 22 358999999988886654222 34666677899999999999999999 99999999
Q ss_pred CCeEeccCCcEEEcccCCCcccc
Q 011302 220 ENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 220 ~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
+|||++ ++.++|+|||.|....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999986443
No 426
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.84 E-value=8.6e-22 Score=195.53 Aligned_cols=185 Identities=30% Similarity=0.446 Sum_probs=137.8
Q ss_pred ceEEEEEeecCCCchHHHHHhC-CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 162 HYSCLVMEYCPGGDLYAARQRQ-PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
.++|+.|++|...+|.+++.+. .+...+....+.++.|++.|++| +|.+|||+||.||....+..+||.|||+.+.
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 3689999999999999999743 44567778899999999999999 9999999999999999999999999999754
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
...++...
T Consensus 406 ~~~~~~~~------------------------------------------------------------------------ 413 (516)
T KOG1033|consen 406 QDKDETVA------------------------------------------------------------------------ 413 (516)
T ss_pred cccCCccc------------------------------------------------------------------------
Confidence 43322000
Q ss_pred ccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhh-CCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhH
Q 011302 321 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEF 399 (489)
Q Consensus 321 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~ 399 (489)
+...+.+.-+||..||+||.|.++.|+.++||||||+||+||+. -...|.. ...+..+..+.+. |....
T Consensus 414 ~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---~~t~~d~r~g~ip-~~~~~------ 483 (516)
T KOG1033|consen 414 PAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---IATLTDIRDGIIP-PEFLQ------ 483 (516)
T ss_pred chhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH---HHhhhhhhcCCCC-hHHhh------
Confidence 01122344589999999999999999999999999999999997 4444422 2233344444322 11111
Q ss_pred HHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 400 EEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 400 ~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
..++-.+|+..||...|.+||++. +.-.|+|.
T Consensus 484 -d~p~e~~ll~~lls~~p~~RP~~~----~~~~~~~~ 515 (516)
T KOG1033|consen 484 -DYPEEYTLLQQLLSPSPEERPSAI----EVALHEFL 515 (516)
T ss_pred -cCcHHHHHHHHhcCCCcccCchHH----HHhhhhhc
Confidence 112356999999999999999654 55556554
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=1.3e-19 Score=168.81 Aligned_cols=136 Identities=22% Similarity=0.229 Sum_probs=112.3
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehH-----HHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDRE-----ALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYS 164 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~-----~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 164 (489)
+.||+|++|.||+|.+.+ ..+++|+.... .........++.+|..++..+.|++|+....++.+....
T Consensus 2 ~~l~~G~~~~vy~~~~~~-------~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLG-------IKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENF 74 (211)
T ss_pred cccccCceEEEEEEeeCC-------CceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCC
Confidence 579999999999998743 45788875432 122222345677899999999999988777777777889
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
++||||++|++|.+++.... . ....++.+++.+|.+||+.|++|||++|.|||++ ++.++|+|||++.
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~ 142 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAE 142 (211)
T ss_pred EEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCccc
Confidence 99999999999999886531 2 7788999999999999999999999999999999 8899999999984
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=9.5e-22 Score=207.81 Aligned_cols=264 Identities=25% Similarity=0.365 Sum_probs=197.5
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCc
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASH 162 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~ 162 (489)
..|.+.+.||+|+|+.|-++..... +...+|+|.+.... .......+...|..+-..+. |.|++.+++...+.+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~----~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~ 94 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRD----PESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR 94 (601)
T ss_pred ccccccccccccccchhhhhhhcCC----CcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCc
Confidence 4678888899999999988876542 45566777765432 11223334445777777776 999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHH-hCCCeeecCCCCCeEeccCC-cEEEcccCCCcc
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLH-MMGIVYRDLKPENVLVREDG-HIMLSDFDLSFK 240 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH-~~~iiHrDIKp~NILl~~~~-~vkl~DFG~a~~ 240 (489)
..++++||..|++++..+........+...+..++.|+..++.|+| ..++.||||||+|.+++..+ .+++.|||+|..
T Consensus 95 ~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 95 SYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred ccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 9999999999999988773222225778889999999999999999 99999999999999999999 999999999854
Q ss_pred cccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccc
Q 011302 241 CDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAE 320 (489)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (489)
+.....
T Consensus 175 ~~~~~g-------------------------------------------------------------------------- 180 (601)
T KOG0590|consen 175 YRNKNG-------------------------------------------------------------------------- 180 (601)
T ss_pred ccccCC--------------------------------------------------------------------------
Confidence 432100
Q ss_pred ccccCCccccC-CCCccCcchhcCCCC-CCcccHHHHHHHHHHHhhCCCCCCCCCcHHH-HHHHhcCCC--CCCCCCCCC
Q 011302 321 PINARSKSFVG-THEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKT-LINILKKPL--TFPRIGVSS 395 (489)
Q Consensus 321 ~~~~~~~~~~G-t~~y~aPE~l~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~~~~--~~p~~~~~~ 395 (489)
........+| ++.|+|||...+..| ....|+||.|+++.-+++|..|+........ +........ ....+..
T Consensus 181 -~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 257 (601)
T KOG0590|consen 181 -AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNS-- 257 (601)
T ss_pred -cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcccc--
Confidence 0112233467 999999999998654 7899999999999999999999976543321 111111110 1111111
Q ss_pred chhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCC
Q 011302 396 SKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG 438 (489)
Q Consensus 396 ~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~ 438 (489)
......+++.++|..+|.+|.+.. ++..++|+..
T Consensus 258 -----~~~~~~~~l~k~l~~~~~~r~s~~----~~~~d~~~~~ 291 (601)
T KOG0590|consen 258 -----ISDQAHDLLHKILKENPSNRLSIE----ELKLDNWLSS 291 (601)
T ss_pred -----CChhhhhcccccccCCchhccccc----cccccccccc
Confidence 112478999999999999999998 9999999988
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.80 E-value=2.8e-19 Score=164.96 Aligned_cols=133 Identities=24% Similarity=0.207 Sum_probs=105.6
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehH-----HHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEE
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDRE-----ALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~-----~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 165 (489)
.||+|+||.||+|.+.+ ..+++|+.... .........++.+|..++..+.|+++.....++......+
T Consensus 1 ~ig~G~~~~vy~~~~~~-------~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLG-------LKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeecCC-------ccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCE
Confidence 48999999999998543 56788875432 1222233466778999999999887655554555666779
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcc
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 240 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~ 240 (489)
+||||++|++|.+++.... . .++.+++.+|.+||+.|++|||++|.|||++ ++.++++|||++..
T Consensus 74 lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999999988775431 1 7899999999999999999999999999999 89999999999843
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.80 E-value=3e-19 Score=189.10 Aligned_cols=139 Identities=22% Similarity=0.193 Sum_probs=111.2
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEee-----ehHHHHHHHHHHHHHHHHHHHHhCCCCCccccccee
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVV-----DREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEF 158 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~-----~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 158 (489)
..|...+.||+|+||+||+|.+.+.. +++|+. ............++.+|+.+++.++|++|+....++
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-------~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~ 405 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-------AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYD 405 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-------ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEE
Confidence 44567889999999999999876521 223322 111222223345678899999999999998887777
Q ss_pred ecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 159 EASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 159 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
.+....++||||++|++|.+++. ....++.|++.+|.|||+.||+||||||+|||+ .++.++|+|||++
T Consensus 406 ~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 406 VDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred EeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 77778899999999999988775 346789999999999999999999999999999 6889999999998
Q ss_pred cc
Q 011302 239 FK 240 (489)
Q Consensus 239 ~~ 240 (489)
+.
T Consensus 475 ~~ 476 (535)
T PRK09605 475 KY 476 (535)
T ss_pred cc
Confidence 54
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.80 E-value=2.2e-19 Score=165.58 Aligned_cols=140 Identities=24% Similarity=0.228 Sum_probs=107.3
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH-------------------HHHHHHHHHHHHHHHh
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-------------------RKKLHRADMEKVILTM 145 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~-------------------~~~~~~~~~E~~~l~~ 145 (489)
.|.+.+.||+|+||.||+|... +++.||||++....... .........|..++..
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP------DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC------CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 3788899999999999999864 36789999876432000 0011235678888888
Q ss_pred CCCCC--cccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeE
Q 011302 146 LDHPF--LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVL 223 (489)
Q Consensus 146 l~hpn--Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NIL 223 (489)
+.|++ ++..++ ....|+||||++|++|..+.. ......++.+++.++.++|+.||+||||||+||+
T Consensus 90 l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nil 157 (198)
T cd05144 90 LYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNIL 157 (198)
T ss_pred HHHcCCCCCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEE
Confidence 88774 444443 234589999999999865432 1345678899999999999999999999999999
Q ss_pred eccCCcEEEcccCCCcccc
Q 011302 224 VREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 224 l~~~~~vkl~DFG~a~~~~ 242 (489)
++.++.++|+|||++..+.
T Consensus 158 l~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 158 VDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EcCCCcEEEEECCccccCC
Confidence 9999999999999996554
No 432
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.76 E-value=3.6e-18 Score=172.98 Aligned_cols=201 Identities=22% Similarity=0.306 Sum_probs=149.7
Q ss_pred HHhCCCCCcccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCC-eeecCCCCC
Q 011302 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGI-VYRDLKPEN 221 (489)
Q Consensus 143 l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~i-iHrDIKp~N 221 (489)
|+.+.|.|+.+++|.+.++..+++|.+||.-|+|.+.+... ...+++.-...++++|+.||.|||..-| .|+.++..|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 35688999999999999999999999999999999998773 3557777778889999999999998765 999999999
Q ss_pred eEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccc
Q 011302 222 VLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQ 301 (489)
Q Consensus 222 ILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
++++..+.+||+|||+.........
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~------------------------------------------------------- 104 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAE------------------------------------------------------- 104 (484)
T ss_pred ceeeeeEEEEechhhhccccccccc-------------------------------------------------------
Confidence 9999999999999999632210000
Q ss_pred cCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCC-------CCCcccHHHHHHHHHHHhhCCCCCCCCC-
Q 011302 302 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG-------HGSAVDWWTLGVFLYEMLYGTTPFKGEN- 373 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-------~~~~~DiwSlGvil~elltG~~Pf~~~~- 373 (489)
........-..-|.|||.+.+.. -+.+.||||||++++|+++...||....
T Consensus 105 ---------------------~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~ 163 (484)
T KOG1023|consen 105 ---------------------PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNL 163 (484)
T ss_pred ---------------------ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccc
Confidence 00000001124599999998742 3667999999999999999999997632
Q ss_pred ---cHHHHHHHhcCCCC--CCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 374 ---NEKTLINILKKPLT--FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 374 ---~~~~~~~i~~~~~~--~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
..+.+..+.++... .|...... +....+..++..||..+|.+||++.
T Consensus 164 ~~~~~eii~~~~~~~~~~~rP~i~~~~----e~~~~l~~l~~~cw~e~P~~rPs~~ 215 (484)
T KOG1023|consen 164 VEDPDEIILRVKKGGSNPFRPSIELLN----ELPPELLLLVARCWEEIPEKRPSIE 215 (484)
T ss_pred cCChHHHHHHHHhcCCCCcCcchhhhh----hcchHHHHHHHHhcccChhhCccHH
Confidence 23455555442221 12211110 2223588999999999999999986
No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.75 E-value=4.2e-18 Score=155.51 Aligned_cols=139 Identities=24% Similarity=0.265 Sum_probs=97.1
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHH---------------------HHHHHHHHHHhCC
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH---------------------RADMEKVILTMLD 147 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~---------------------~~~~E~~~l~~l~ 147 (489)
.+.||+|+||+||+|.+. .+..||||++............ ....|...+..+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~------~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~ 75 (187)
T cd05119 2 GGPIGTGKEADVYLALDG------DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLY 75 (187)
T ss_pred CcccccccceeEEEEECC------CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHH
Confidence 467999999999999866 2578999998753221111110 1134555555554
Q ss_pred CCC--cccccceeecCceEEEEEeecCCCchHH-HHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeE
Q 011302 148 HPF--LPTLYAEFEASHYSCLVMEYCPGGDLYA-ARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVL 223 (489)
Q Consensus 148 hpn--Iv~l~~~~~~~~~~~lV~E~~~gg~L~~-~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NIL 223 (489)
+.+ +.+.+++ ...++||||++|+.+.. .+... .. ..++..++.+++.++.++|. .||+||||||+|||
T Consensus 76 ~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~---~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nil 147 (187)
T cd05119 76 EAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV---RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNIL 147 (187)
T ss_pred HcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhh---hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEE
Confidence 432 4444433 23589999999865421 11111 01 16688899999999999999 99999999999999
Q ss_pred eccCCcEEEcccCCCcccc
Q 011302 224 VREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 224 l~~~~~vkl~DFG~a~~~~ 242 (489)
++ ++.++|+|||.+....
T Consensus 148 i~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 148 VD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred EE-CCcEEEEECccccccc
Confidence 99 9999999999986543
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.74 E-value=2.4e-17 Score=156.07 Aligned_cols=137 Identities=23% Similarity=0.229 Sum_probs=102.5
Q ss_pred eeec-cCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH----------HHHHHHHHHHHHHHHhCCCCCc--ccccc
Q 011302 90 RRLG-SGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI----------RKKLHRADMEKVILTMLDHPFL--PTLYA 156 (489)
Q Consensus 90 ~~lG-~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~hpnI--v~l~~ 156 (489)
..|| .|+.|+||.+... +..++||.+....... .....++.+|..++..+.|++| +..++
T Consensus 37 ~~lg~~~g~gtv~~v~~~-------~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~ 109 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-------GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIA 109 (239)
T ss_pred ceeecCCCCccEEEEEeC-------CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEe
Confidence 4577 7888888888764 3567888885432110 1223567789999999998875 66776
Q ss_pred eeecC-ce---EEEEEeecCC-CchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEE
Q 011302 157 EFEAS-HY---SCLVMEYCPG-GDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIM 231 (489)
Q Consensus 157 ~~~~~-~~---~~lV~E~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vk 231 (489)
+.... .. .++||||++| .+|.+++.. ..+++. .+.||+.+|.+||++||+||||||+|||++.++.++
T Consensus 110 ~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 110 ARVVRHGLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred eeeeecCcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEE
Confidence 54332 22 3599999997 689888754 245543 367899999999999999999999999999999999
Q ss_pred EcccCCCcc
Q 011302 232 LSDFDLSFK 240 (489)
Q Consensus 232 l~DFG~a~~ 240 (489)
|+|||.+..
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999999843
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.69 E-value=8.1e-17 Score=140.74 Aligned_cols=133 Identities=23% Similarity=0.278 Sum_probs=110.5
Q ss_pred eeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCC--CCcccccceeecCceEE
Q 011302 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH--PFLPTLYAEFEASHYSC 165 (489)
Q Consensus 88 ~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pnIv~l~~~~~~~~~~~ 165 (489)
+++.||+|.++.||++...+ ..+++|....... ...+..|..+++.+.| .++++++.++...+..|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-------~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~ 69 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-------EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSY 69 (155)
T ss_pred cceecccccccceEEEEecC-------CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccE
Confidence 45789999999999999754 4689999865432 2356668899999976 58999999888888999
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhC---CCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMM---GIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
++|||++|+.+..+ +......++.+++.+|++||.. +++|+||||+|||++..+.++++|||.+...
T Consensus 70 ~v~e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 70 LLMEWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred EEEEecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 99999988877543 4456677889999999999985 6999999999999999899999999998543
No 436
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.56 E-value=5.4e-15 Score=153.68 Aligned_cols=144 Identities=18% Similarity=0.240 Sum_probs=94.5
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH-------------------------------HHH
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-------------------------------RKK 132 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~-------------------------------~~~ 132 (489)
.+|.. +.||+|++|.||+|+.++ +++.||||++++..... .+.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~-----~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~ 193 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKD-----NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEF 193 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECC-----CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHH
Confidence 45676 789999999999999986 46889999997542110 011
Q ss_pred HHHHHHHHHHHHhCCCCCcccccceeecC-------------ceEEEEEeecCCCchHHHHHhCCCC----CCChhhHHH
Q 011302 133 LHRADMEKVILTMLDHPFLPTLYAEFEAS-------------HYSCLVMEYCPGGDLYAARQRQPGK----RFGISSAKF 195 (489)
Q Consensus 133 ~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-------------~~~~lV~E~~~gg~L~~~l~~~~~~----~l~~~~~~~ 195 (489)
...+..|...+... .|+.++...|.+. ..-+|||||+.|+.|.++......+ .+.+..+..
T Consensus 194 ~~~l~~ElD~~~Ea--~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~ 271 (537)
T PRK04750 194 EKTLHDELDLMREA--ANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEV 271 (537)
T ss_pred HHHHHHhhCHHHHH--HHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHH
Confidence 12223333333322 2444444443333 3346999999999997643211111 244444455
Q ss_pred HHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC----cEEEcccCCCcccc
Q 011302 196 YAAETLLALEYLHMMGIVYRDLKPENVLVREDG----HIMLSDFDLSFKCD 242 (489)
Q Consensus 196 i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~----~vkl~DFG~a~~~~ 242 (489)
++.|++ ..|++|+|+||.||+++.+| .++++|||++..++
T Consensus 272 ~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 272 FFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 555554 58999999999999999888 99999999986554
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.55 E-value=3.1e-14 Score=146.30 Aligned_cols=141 Identities=21% Similarity=0.236 Sum_probs=96.3
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH-------------------------------HHHHH----
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-------------------------------RKKLH---- 134 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~-------------------------------~~~~~---- 134 (489)
+.||+|++|.||+|+.++ ++.||||+.+...... .+...
T Consensus 123 ~plasaSigQVh~A~l~~------G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVD------GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred cceeeeehhheEEEEecC------CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 579999999999999874 5789999986431100 00000
Q ss_pred --HHHHHHHHHHhC----C-CCCc--ccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHH-HH
Q 011302 135 --RADMEKVILTML----D-HPFL--PTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLL-AL 204 (489)
Q Consensus 135 --~~~~E~~~l~~l----~-hpnI--v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~-~L 204 (489)
.+.+|...+.++ . +++| .+++. ......+|||||++|++|.++..... ..+ ....++.+++. .+
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l 270 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFL 270 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHH
Confidence 133455555544 2 3432 23332 22344689999999999987765321 112 23455666665 47
Q ss_pred HHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 205 EYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 205 ~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..+|..|++|+|+||.||+++.+|.++|+|||++..+.
T Consensus 271 ~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 271 NQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 88999999999999999999999999999999986554
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=6.8e-15 Score=149.35 Aligned_cols=262 Identities=23% Similarity=0.212 Sum_probs=183.3
Q ss_pred CCceeeeeecc--CCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeec
Q 011302 84 DHFRLLRRLGS--GDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEA 160 (489)
Q Consensus 84 ~~y~~~~~lG~--G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~ 160 (489)
..|.+...+|. |.+|.||.+.+... .....+|+|.-+...-. .....+-.+|.....+++ |+|.++.+..|+.
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~---~s~~~~a~k~s~~p~s~-p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNS---ESPHKFAVKKSKIPFSP-PLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcc---cCCcccccccccCCCCC-ccccccccchhhcccccCccccccccCccccc
Confidence 45778889999 99999999988321 14667888873211100 001111223555555554 9999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHH----HHHHHHhCCCeeecCCCCCeEeccC-CcEEEccc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLL----ALEYLHMMGIVYRDLKPENVLVRED-GHIMLSDF 235 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~----~L~yLH~~~iiHrDIKp~NILl~~~-~~vkl~DF 235 (489)
.+.+|+-+|+| |.+|.++.... ..-++...+..++.++.. ||.++|+.+++|-|+||+||++..+ ...+++||
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCc
Confidence 99999999999 67887765443 345888889999999999 9999999999999999999999999 88999999
Q ss_pred CCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCc
Q 011302 236 DLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDP 315 (489)
Q Consensus 236 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
|+...+....- .+.
T Consensus 268 ~~v~~i~~~~~---------------------------------~~~--------------------------------- 281 (524)
T KOG0601|consen 268 GLVSKISDGNF---------------------------------SSV--------------------------------- 281 (524)
T ss_pred ceeEEccCCcc---------------------------------ccc---------------------------------
Confidence 99744321100 000
Q ss_pred cccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCC--CcHHHHHHHhcCCCCCCCCCC
Q 011302 316 EVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE--NNEKTLINILKKPLTFPRIGV 393 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~p~~~~ 393 (489)
.......-|...|++||.+.+. ++...||++||-++.+-.+|..++... +....+..+. .|...+
T Consensus 282 -------~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-----ip~e~~ 348 (524)
T KOG0601|consen 282 -------FKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-----IPLEFC 348 (524)
T ss_pred -------eeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-----Cchhhh
Confidence 0000111366789999999876 788999999999999999888776544 2222222111 222111
Q ss_pred CCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 394 SSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 394 ~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
.... ..+...+..|+..+|-.|++.+ .++.|++.+..
T Consensus 349 ~~~s-----~~l~~~~~~~~d~~~~~~~~~q----~~~~l~~i~s~ 385 (524)
T KOG0601|consen 349 EGGS-----SSLRSVTSQMLDEDPRLRLTAQ----ILTALNVIHSK 385 (524)
T ss_pred cCcc-----hhhhhHHHHhcCcchhhhhHHH----HHhccccccch
Confidence 1111 1355689999999999999987 88889887644
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.52 E-value=7.7e-15 Score=148.96 Aligned_cols=251 Identities=21% Similarity=0.293 Sum_probs=179.3
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC-CCCCcccccceeec
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML-DHPFLPTLYAEFEA 160 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~ 160 (489)
...+|.++..||.|.|+.|+.+..+. ...+.|++|-+.+.......... -..|+.+...+ .|.++++.+..|..
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~----~~~~~Y~~ke~~~~l~~~~~di~-sl~ev~l~~~l~~~~~~~g~~~~W~~ 337 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRP----EGDCIYAAKELLNGLATFASDIF-SLGEVILEAILGSHLPSVGKNSSWSQ 337 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecC----CCCceEeChhhhccccchHhhhc-chhhhhHhhHhhcccccCCCCCCccc
Confidence 35789999999999999999988552 25788999988654333222211 22355555555 49999999999999
Q ss_pred CceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccC-CcEEEcccCCCc
Q 011302 161 SHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRED-GHIMLSDFDLSF 239 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~-~~vkl~DFG~a~ 239 (489)
..+.|+-.|||.++++...+.-. ..+.+...+.+..|++.++.++|+..++|+|+||.||++..+ +..++.|||.++
T Consensus 338 ~r~~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 338 LRQGYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred cccccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccc
Confidence 99999999999999986654222 457888899999999999999999999999999999999976 788999999874
Q ss_pred ccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCccccc
Q 011302 240 KCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVA 319 (489)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (489)
.+...
T Consensus 416 ~~~~~--------------------------------------------------------------------------- 420 (524)
T KOG0601|consen 416 RLAFS--------------------------------------------------------------------------- 420 (524)
T ss_pred cccee---------------------------------------------------------------------------
Confidence 32210
Q ss_pred cccccCCccccC-CCCc-cCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCch
Q 011302 320 EPINARSKSFVG-THEY-LAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSK 397 (489)
Q Consensus 320 ~~~~~~~~~~~G-t~~y-~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 397 (489)
.....+ +..| .+++......+..+.|++|||.-++|.++|...-..... ...|..+.. |......
T Consensus 421 ------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~~--p~~~~~~-- 487 (524)
T KOG0601|consen 421 ------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGDT--PNLPGLK-- 487 (524)
T ss_pred ------cccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeeecccc--cCCCchH--
Confidence 001112 2334 355555566689999999999999999998765332222 223333322 1111111
Q ss_pred hHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCc
Q 011302 398 EFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 436 (489)
Q Consensus 398 ~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f 436 (489)
.+++.+...++..++..|+.+. ++..|.=|
T Consensus 488 -----~~~q~~~kv~~~~~~~~~~l~~----~l~~~~~~ 517 (524)
T KOG0601|consen 488 -----LQLQVLLKVMINPDRKRRPSAV----ELSLHSEF 517 (524)
T ss_pred -----HhhhhhhhhhcCCccccchhhh----hhcccchh
Confidence 2478899999999999999886 66666444
No 440
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.49 E-value=6.5e-14 Score=131.69 Aligned_cols=208 Identities=19% Similarity=0.212 Sum_probs=145.1
Q ss_pred HHhCCCCCcccccceeecCc-----eEEEEEeecCCCchHHHHHhC--CCCCCChhhHHHHHHHHHHHHHHHHhCC--Ce
Q 011302 143 LTMLDHPFLPTLYAEFEASH-----YSCLVMEYCPGGDLYAARQRQ--PGKRFGISSAKFYAAETLLALEYLHMMG--IV 213 (489)
Q Consensus 143 l~~l~hpnIv~l~~~~~~~~-----~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~--ii 213 (489)
|-.+.|.|||+++.+|.+.+ ...+++||+.-|+|.++|++. ....+.....++|+-||+.||.|||+.. ||
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii 200 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII 200 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence 44567999999999997554 478999999999999988763 2356788888999999999999999875 99
Q ss_pred eecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccc
Q 011302 214 YRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAV 293 (489)
Q Consensus 214 HrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (489)
|+.+.++-|++..+|.+|+.--.....-. .
T Consensus 201 hgnlTc~tifiq~ngLIkig~~ap~s~h~----s---------------------------------------------- 230 (458)
T KOG1266|consen 201 HGNLTCDTIFIQHNGLIKIGSVAPDSTHP----S---------------------------------------------- 230 (458)
T ss_pred cCCcchhheeecCCceEEecccCccccch----h----------------------------------------------
Confidence 99999999999999998875332210000 0
Q ss_pred cccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCC-CCC
Q 011302 294 TVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF-KGE 372 (489)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf-~~~ 372 (489)
+.+. .......-.|-++|.|||.=.-...+.++|||+||.+..||..|+.-- .+.
T Consensus 231 -~~~~-----------------------~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnse 286 (458)
T KOG1266|consen 231 -VNST-----------------------REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSE 286 (458)
T ss_pred -hhhh-----------------------hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCc
Confidence 0000 000001113567899998766666678999999999999999887653 222
Q ss_pred CcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCC
Q 011302 373 NNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGIN 440 (489)
Q Consensus 373 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~ 440 (489)
.....-..|..-.+.. ... .-+++|.+||+-.|..||++. +++.||-+=.+.
T Consensus 287 S~~~~ee~ia~~i~~l-----en~-------lqr~~i~kcl~~eP~~rp~ar----~llfHpllfeVh 338 (458)
T KOG1266|consen 287 SKVEVEENIANVIIGL-----ENG-------LQRGSITKCLEGEPNGRPDAR----LLLFHPLLFEVH 338 (458)
T ss_pred ceeehhhhhhhheeec-----cCc-------cccCcCcccccCCCCCCcchh----hhhcCceeeecc
Confidence 2222222222211111 000 125789999999999999998 999999875543
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.48 E-value=1.2e-13 Score=123.76 Aligned_cols=127 Identities=20% Similarity=0.246 Sum_probs=94.4
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCc-ccccceeecCceEEEE
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL-PTLYAEFEASHYSCLV 167 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~~~~lV 167 (489)
++.|+.|.++.||+++.. +..|++|+...... ....+..|..+++.+.+.++ .+++.... ...++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~-------~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv 69 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-------NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLI 69 (170)
T ss_pred eeecCCcccCceEEEEEC-------CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEE
Confidence 467899999999999865 35799999865421 11234568888888865554 44554432 345899
Q ss_pred EeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCC-----eeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 168 MEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGI-----VYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 168 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~i-----iHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
|||++|.++... ......++.+++.+|+.||..++ +|+|++|.|||++ ++.++|+|||.+.
T Consensus 70 ~e~i~G~~l~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 70 TEFIEGSELLTE----------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred EEecCCCccccc----------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 999999888542 01123457899999999999985 9999999999999 7789999999984
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.45 E-value=8.6e-13 Score=135.41 Aligned_cols=116 Identities=21% Similarity=0.179 Sum_probs=91.0
Q ss_pred CCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhh
Q 011302 113 PQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISS 192 (489)
Q Consensus 113 ~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~ 192 (489)
.+..+.|.+.+.... .....+.+-+.-|+.++||||+++++.++..+.+|||+|-+ --|..++.. ++...
T Consensus 36 ~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~-----l~~~~ 105 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE-----LGKEE 105 (690)
T ss_pred cCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH-----hHHHH
Confidence 344555555543322 12223334556688899999999999999999999999998 466666654 44677
Q ss_pred HHHHHHHHHHHHHHHH-hCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 193 AKFYAAETLLALEYLH-MMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 193 ~~~i~~qi~~~L~yLH-~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
+...+.||+.||.||| ..+++|++|.-.-|+++..|..||++|.++
T Consensus 106 v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v 152 (690)
T KOG1243|consen 106 VCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELV 152 (690)
T ss_pred HHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEE
Confidence 7888999999999998 678999999999999999999999999886
No 443
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.36 E-value=8.6e-12 Score=113.26 Aligned_cols=143 Identities=18% Similarity=0.147 Sum_probs=98.6
Q ss_pred eeeccCCceeEEEEEEccCC-CCCCCeeEEEEeeehHHHH-------H--H----------HHHH----HHHHHHHHHHh
Q 011302 90 RRLGSGDIGNVYLCQIRNPM-VGLPQCFYAMKVVDREALA-------I--R----------KKLH----RADMEKVILTM 145 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~-~~~~~~~~aiK~~~~~~~~-------~--~----------~~~~----~~~~E~~~l~~ 145 (489)
..||.|-=+.||.|...+.. .......+|||+.+..... . + +... -...|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999754310 0112467899998531100 0 0 0011 13478888888
Q ss_pred CCC--CCcccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHH-HhCCCeeecCCCCCe
Q 011302 146 LDH--PFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYL-HMMGIVYRDLKPENV 222 (489)
Q Consensus 146 l~h--pnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yL-H~~~iiHrDIKp~NI 222 (489)
+.. -++.+.+++ ..-+|||||+.++.+..-.-+. ..++..+...++.+++.+|..| |..||||+||++.||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI 156 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM 156 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 853 456666654 3457999999665453221111 2355666778889999999999 899999999999999
Q ss_pred EeccCCcEEEcccCCCc
Q 011302 223 LVREDGHIMLSDFDLSF 239 (489)
Q Consensus 223 Ll~~~~~vkl~DFG~a~ 239 (489)
|+. ++.+.|+|||.|-
T Consensus 157 L~~-~~~v~iIDF~qav 172 (197)
T cd05146 157 LWH-DGKVWFIDVSQSV 172 (197)
T ss_pred EEE-CCcEEEEECCCce
Confidence 997 5789999999874
No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=3.1e-11 Score=106.00 Aligned_cols=132 Identities=23% Similarity=0.202 Sum_probs=98.5
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEe-----eehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCceEE
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKV-----VDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSC 165 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~-----~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 165 (489)
.+++|+=+.+|.+.+.+. .+.+|. .+...+..+-...+..+|+.++..+.--.|..-+-++.+.....
T Consensus 3 ~i~~GAEa~i~~~~~~g~-------~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~ 75 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGL-------PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGL 75 (204)
T ss_pred hhhCCcceeEEeeeccCc-------ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCE
Confidence 578899999999876541 133332 23344555555667788999999886545444343456667778
Q ss_pred EEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 166 LVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 166 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
|+|||++|-.|.+.+... ...++..+-.-+.-||..||||+||.+.||++..++ +.++|||++.
T Consensus 76 I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~ 139 (204)
T COG3642 76 IVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGE 139 (204)
T ss_pred EEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccc
Confidence 999999988888888654 145677888888899999999999999999998654 9999999984
No 445
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.26 E-value=6.2e-11 Score=103.65 Aligned_cols=144 Identities=21% Similarity=0.144 Sum_probs=105.1
Q ss_pred eeeeeccCCceeEEEEEEccCCCCCCCeeEEE-----EeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceeecCc
Q 011302 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAM-----KVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASH 162 (489)
Q Consensus 88 ~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~ai-----K~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 162 (489)
.+..|-+|+-+.|+++.+.+ +.+.| |..+-..+..+-...+...|..+|.++.--.|.--.-+|.+..
T Consensus 11 ~l~likQGAEArv~~~~~~G-------e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSG-------EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY 83 (229)
T ss_pred cceeeeccceeeEeeeccCC-------ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence 56778899999999998775 23333 3444455555555677888999999886444443333466666
Q ss_pred eEEEEEeecCC-CchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC---cEEEcccCCC
Q 011302 163 YSCLVMEYCPG-GDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG---HIMLSDFDLS 238 (489)
Q Consensus 163 ~~~lV~E~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~---~vkl~DFG~a 238 (489)
.-.|+|||++| .++.+++...-...........++.+|-+.|.-||.++|||+||..+||||..+| .+.|+|||++
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls 163 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLS 163 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecch
Confidence 67899999966 3777777654333333333367899999999999999999999999999998665 3589999997
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.21 E-value=4.2e-11 Score=111.99 Aligned_cols=139 Identities=23% Similarity=0.220 Sum_probs=102.8
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCC--CCcccccceeecC---ceE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH--PFLPTLYAEFEAS---HYS 164 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pnIv~l~~~~~~~---~~~ 164 (489)
+.||.|.++.||++...+ ++.|++|+....... .....+..|..+++.+.+ ..+.+++.+.... +..
T Consensus 4 ~~l~~G~~n~~~~v~~~~------g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~ 75 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG------GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTP 75 (223)
T ss_pred eecCCCccceEEEEEecC------CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCc
Confidence 578999999999998653 357899998654321 123456679999999875 3467777766653 367
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-----------------------------------
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM----------------------------------- 209 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~----------------------------------- 209 (489)
|+||||++|.+|...+.. ..+++.....++.+++.+|..||+
T Consensus 76 ~~v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (223)
T cd05154 76 FYVMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTD 152 (223)
T ss_pred eEEEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccc
Confidence 899999999988654321 235666667777777777777773
Q ss_pred ---------------------CCCeeecCCCCCeEecc--CCcEEEcccCCCc
Q 011302 210 ---------------------MGIVYRDLKPENVLVRE--DGHIMLSDFDLSF 239 (489)
Q Consensus 210 ---------------------~~iiHrDIKp~NILl~~--~~~vkl~DFG~a~ 239 (489)
..+||+|+.+.|||++. ++.+.|+||+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 153 EPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred ccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 23699999999999998 6778999999873
No 447
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.14 E-value=7.5e-10 Score=106.16 Aligned_cols=135 Identities=15% Similarity=0.015 Sum_probs=94.0
Q ss_pred eeEEEEEEccCCCCCCCeeEEEEeeehHHHH--HHH------HHHHHHHHHHHHHhCCCCC--cccccceeec-----Cc
Q 011302 98 GNVYLCQIRNPMVGLPQCFYAMKVVDREALA--IRK------KLHRADMEKVILTMLDHPF--LPTLYAEFEA-----SH 162 (489)
Q Consensus 98 g~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~--~~~------~~~~~~~E~~~l~~l~hpn--Iv~l~~~~~~-----~~ 162 (489)
..|+++... ++.|.||........ .+. -...+.+|...+.+|..-+ ++..+++++. ..
T Consensus 36 rrvvr~~~~-------g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~ 108 (268)
T PRK15123 36 RRTLRFELA-------GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR 108 (268)
T ss_pred ceEEEEEEC-------CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence 346665543 356888876432211 011 0113667888887775333 3444555543 23
Q ss_pred eEEEEEeecCCC-chHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc-------CCcEEEcc
Q 011302 163 YSCLVMEYCPGG-DLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE-------DGHIMLSD 234 (489)
Q Consensus 163 ~~~lV~E~~~gg-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~-------~~~vkl~D 234 (489)
..+||||++++. +|.+++........+......++.+++..+.-||..||+|+|+++.|||++. ++.+.|+|
T Consensus 109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID 188 (268)
T PRK15123 109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVID 188 (268)
T ss_pred eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence 578999999875 7888875422244566778899999999999999999999999999999985 46899999
Q ss_pred cCCCc
Q 011302 235 FDLSF 239 (489)
Q Consensus 235 FG~a~ 239 (489)
|+.+.
T Consensus 189 l~r~~ 193 (268)
T PRK15123 189 LHRAQ 193 (268)
T ss_pred CCccc
Confidence 99873
No 448
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=1.7e-10 Score=119.29 Aligned_cols=174 Identities=20% Similarity=0.273 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHh-CCCeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCc
Q 011302 197 AAETLLALEYLHM-MGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPV 275 (489)
Q Consensus 197 ~~qi~~~L~yLH~-~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (489)
+.+++.||.|+|. .++||+.|.|++|.++.+|..||+.|+++-......+
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~----------------------------- 155 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE----------------------------- 155 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc-----------------------------
Confidence 3455599999996 4899999999999999999999999998622111000
Q ss_pred cccccccccccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHH
Q 011302 276 LSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTL 355 (489)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSl 355 (489)
..|.. ..........-...|.|||.+.+...+.++|+|||
T Consensus 156 -~p~~~---------------------------------------yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSl 195 (700)
T KOG2137|consen 156 -YPFSE---------------------------------------YDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSL 195 (700)
T ss_pred -ccccc---------------------------------------CCCCCChhhccCcccccchhhccccccccccceee
Confidence 00000 00000111223467999999999888999999999
Q ss_pred HHHHHHHh-hCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCC
Q 011302 356 GVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 434 (489)
Q Consensus 356 Gvil~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp 434 (489)
||++|-+. .|+..+.+........ .............. -+.+.++++=|.++|..++.-||++. .++.-|
T Consensus 196 G~li~~i~~~gk~i~~a~~~~~~~~-~~~~~~~~~~~~~s----~~~p~el~~~l~k~l~~~~~~rp~~~----~l~~~~ 266 (700)
T KOG2137|consen 196 GVLIYTIYNGGKSIIAANGGLLSYS-FSRNLLNAGAFGYS----NNLPSELRESLKKLLNGDSAVRPTLD----LLLSIP 266 (700)
T ss_pred eeEEEEEecCCcchhhccCCcchhh-hhhccccccccccc----ccCcHHHHHHHHHHhcCCcccCcchh----hhhccc
Confidence 99999999 6777776554332221 11111111111111 01223588999999999999999776 889999
Q ss_pred CcCCCCccccccCC
Q 011302 435 FFKGINWALIRSIK 448 (489)
Q Consensus 435 ~f~~~~~~~~~~~~ 448 (489)
||.+..-..|+.+.
T Consensus 267 ff~D~~~~aLrfLD 280 (700)
T KOG2137|consen 267 FFSDPGLKALRFLD 280 (700)
T ss_pred ccCCchhhhhhhcc
Confidence 99987766665544
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.04 E-value=1.2e-09 Score=98.87 Aligned_cols=127 Identities=24% Similarity=0.199 Sum_probs=82.5
Q ss_pred eEEEEEEccCCCCCCCeeEEEEeeehHHH-----------------------HHHHHHHHHHHHHHHHHhCCCC--Cccc
Q 011302 99 NVYLCQIRNPMVGLPQCFYAMKVVDREAL-----------------------AIRKKLHRADMEKVILTMLDHP--FLPT 153 (489)
Q Consensus 99 ~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~-----------------------~~~~~~~~~~~E~~~l~~l~hp--nIv~ 153 (489)
.||.|...+ +..+|+|+.+.... ...........|...|.++..- ++.+
T Consensus 1 ~Vy~~~~~~------~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~ 74 (188)
T PF01163_consen 1 DVYHAIDPD------GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPK 74 (188)
T ss_dssp EEEEEEECT------TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--
T ss_pred CEEEEECCC------CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCc
Confidence 378887654 56789998753210 0111223467899999999765 4666
Q ss_pred ccceeecCceEEEEEeecC--CCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHH-HHhCCCeeecCCCCCeEeccCCcE
Q 011302 154 LYAEFEASHYSCLVMEYCP--GGDLYAARQRQPGKRFGISSAKFYAAETLLALEY-LHMMGIVYRDLKPENVLVREDGHI 230 (489)
Q Consensus 154 l~~~~~~~~~~~lV~E~~~--gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~y-LH~~~iiHrDIKp~NILl~~~~~v 230 (489)
.+++. .-+|||||++ |..+..+... .++..+...++.+++..+.. +|..||||+||.+.|||++.+ .+
T Consensus 75 p~~~~----~~~ivME~I~~~G~~~~~l~~~----~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 75 PYDYN----RNVIVMEYIGEDGVPLPRLKDV----DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp EEEEE----TTEEEEE--EETTEEGGCHHHC----GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CE
T ss_pred EEEEe----CCEEEEEecCCCccchhhHHhc----cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eE
Confidence 66542 2369999998 6666544332 23356677888899986666 579999999999999999977 99
Q ss_pred EEcccCCCcc
Q 011302 231 MLSDFDLSFK 240 (489)
Q Consensus 231 kl~DFG~a~~ 240 (489)
.|+|||.|..
T Consensus 146 ~iIDf~qav~ 155 (188)
T PF01163_consen 146 YIIDFGQAVD 155 (188)
T ss_dssp EE--GTTEEE
T ss_pred EEEecCccee
Confidence 9999998743
No 450
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.95 E-value=1.2e-08 Score=102.35 Aligned_cols=133 Identities=17% Similarity=0.144 Sum_probs=103.2
Q ss_pred eeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCcccccceee----cCceEEEEEeecCC
Q 011302 98 GNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFE----ASHYSCLVMEYCPG 173 (489)
Q Consensus 98 g~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~----~~~~~~lV~E~~~g 173 (489)
.+.|+|...- ++..|.+|++........++ ...-+++++++.|+|||+|.++|. .+.-++||++|.++
T Consensus 290 ~Ttyk~~s~~-----DG~~YvLkRlhg~r~~~~nk---~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~ 361 (655)
T KOG3741|consen 290 ITTYKATSNV-----DGNAYVLKRLHGDRDQSTNK---DTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPS 361 (655)
T ss_pred ceeEeeeecc-----CCceeeeeeeccccccCccc---chHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence 4678888765 67889999995443322211 222567899999999999999987 34568999999875
Q ss_pred -CchHHHHHhC-------------CCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 174 -GDLYAARQRQ-------------PGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 174 -g~L~~~l~~~-------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
++|+++.-.. .+...++..++.|+.|+..||.++|+.|+.-+-|.|.+||++.+.+++|..-|+.
T Consensus 362 s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 362 SPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred CchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccce
Confidence 5777653221 2345778889999999999999999999999999999999998888998877764
No 451
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.88 E-value=3.1e-08 Score=91.73 Aligned_cols=125 Identities=27% Similarity=0.198 Sum_probs=90.6
Q ss_pred CCeeEEEEeeehHH----HHHHHHHHHHHHHHHHHHhCCCC--CcccccceeecC----ceEEEEEeecCCC-chHHHHH
Q 011302 113 PQCFYAMKVVDREA----LAIRKKLHRADMEKVILTMLDHP--FLPTLYAEFEAS----HYSCLVMEYCPGG-DLYAARQ 181 (489)
Q Consensus 113 ~~~~~aiK~~~~~~----~~~~~~~~~~~~E~~~l~~l~hp--nIv~l~~~~~~~----~~~~lV~E~~~gg-~L~~~l~ 181 (489)
..+.|-+|...... ....-...+..+|...+..|..- .+++.+++.+.. ...|||||+++|. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 34566666543321 11112234566788877776533 345666655542 2458999999874 7988887
Q ss_pred hCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCC---cEEEcccCCCc
Q 011302 182 RQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDG---HIMLSDFDLSF 239 (489)
Q Consensus 182 ~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~---~vkl~DFG~a~ 239 (489)
... .++......++.+++..+.-||.+||+|+|+++.|||++.++ .+.|+||+-++
T Consensus 111 ~~~--~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~ 169 (206)
T PF06293_consen 111 QWE--QLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR 169 (206)
T ss_pred hhc--ccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence 642 266777889999999999999999999999999999999887 89999999863
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.75 E-value=7.1e-08 Score=90.05 Aligned_cols=136 Identities=26% Similarity=0.271 Sum_probs=99.1
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH------H-------------HHHHHHHHHHHHHHhC
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI------R-------------KKLHRADMEKVILTML 146 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~------~-------------~~~~~~~~E~~~l~~l 146 (489)
+.+...||-|-=|.||.|.... +..+|||.-+....+- + -....+.+|..+|.+|
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~------g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L 166 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPK------GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRL 166 (304)
T ss_pred HhhccccccCccceEEEEECCC------CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHh
Confidence 3466889999999999998763 5778999754211110 0 0122356788899988
Q ss_pred CCC--CcccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEe
Q 011302 147 DHP--FLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLV 224 (489)
Q Consensus 147 ~hp--nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl 224 (489)
... .|.+-+++ +.-.+||||++|-.|+... +.......++..|++-+.-+-..||||+|+.+=|||+
T Consensus 167 ~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV 235 (304)
T COG0478 167 YPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV 235 (304)
T ss_pred hhcCCCCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE
Confidence 755 56666654 4457999999998885432 2344556667777777776668999999999999999
Q ss_pred ccCCcEEEcccCCC
Q 011302 225 REDGHIMLSDFDLS 238 (489)
Q Consensus 225 ~~~~~vkl~DFG~a 238 (489)
++||.+.++||--+
T Consensus 236 ~~dg~~~vIDwPQ~ 249 (304)
T COG0478 236 TEDGDIVVIDWPQA 249 (304)
T ss_pred ecCCCEEEEeCccc
Confidence 99999999999754
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.72 E-value=1.1e-07 Score=86.83 Aligned_cols=138 Identities=12% Similarity=0.058 Sum_probs=98.1
Q ss_pred ccCCceeEEEEEEccCCCCCCCeeEEEEeeehHH---HHHHHHHHHHHHHHHHHHhCCCCC--cccccceee-c----Cc
Q 011302 93 GSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREA---LAIRKKLHRADMEKVILTMLDHPF--LPTLYAEFE-A----SH 162 (489)
Q Consensus 93 G~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~~~-~----~~ 162 (489)
|.||.+-|+.....+ +.|-+|.-.... +....-...+.+|...|..|..-+ +.+.. ++. . .-
T Consensus 27 ~rgG~SgV~r~~~~g-------~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~ 98 (216)
T PRK09902 27 RRNGMSGVQCVERNG-------KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEW 98 (216)
T ss_pred CCCCcceEEEEEeCC-------cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCce
Confidence 568999999877664 246677654111 000112334677888888875322 45554 332 1 12
Q ss_pred eEEEEEeecCC-CchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCc--EEEcccCCC
Q 011302 163 YSCLVMEYCPG-GDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGH--IMLSDFDLS 238 (489)
Q Consensus 163 ~~~lV~E~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~--vkl~DFG~a 238 (489)
.-+||+|-+.| -+|.+++....-.+.+......++.+|+..|+-||..|+.|+|+-+.|||++.+|. ++++||.-+
T Consensus 99 rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 99 RALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred EEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 46899998743 68888876643345677778899999999999999999999999999999987777 999999865
No 454
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.66 E-value=7.6e-07 Score=81.60 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=92.9
Q ss_pred cccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHH------HHHHHHHHhC---CCCCc
Q 011302 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA------DMEKVILTML---DHPFL 151 (489)
Q Consensus 81 ~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~------~~E~~~l~~l---~hpnI 151 (489)
+...+|.+++.+-......|.+-... ++.|.+|..+.+.......+..+ .++...+..+ +--.+
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei~-------~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~ 100 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEID-------GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEP 100 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEEC-------CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccc
Confidence 34578999999988888888776644 46789999876543322222222 2233323333 23333
Q ss_pred ccccceee-----cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEecc
Q 011302 152 PTLYAEFE-----ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVRE 226 (489)
Q Consensus 152 v~l~~~~~-----~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~ 226 (489)
..++.+.+ -....+|||||++|..|.++.. +++ .+...++++|.-||+.|+.|+|..|.|++++.
T Consensus 101 ~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~ 170 (229)
T PF06176_consen 101 ADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN 170 (229)
T ss_pred ccceeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC
Confidence 34333332 2234568999999998866432 222 24456778899999999999999999999995
Q ss_pred CCcEEEcccCCC
Q 011302 227 DGHIMLSDFDLS 238 (489)
Q Consensus 227 ~~~vkl~DFG~a 238 (489)
++ ++++||+..
T Consensus 171 ~~-i~iID~~~k 181 (229)
T PF06176_consen 171 NG-IRIIDTQGK 181 (229)
T ss_pred Cc-EEEEECccc
Confidence 54 999999975
No 455
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.63 E-value=4.6e-07 Score=88.99 Aligned_cols=193 Identities=22% Similarity=0.257 Sum_probs=124.5
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHH-HhCCCCCccc--------ccc
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL-TMLDHPFLPT--------LYA 156 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l-~~l~hpnIv~--------l~~ 156 (489)
....+.||+|+-+.+|-.-.-.. . +-|+..+.......+ .+..| +.-.||-+-. |+|
T Consensus 13 i~~gr~LgqGgea~ly~l~e~~d-------~-VAKIYh~Pppa~~aq------k~a~la~~p~~p~~~~rvaWPqa~L~G 78 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLGEVRD-------Q-VAKIYHAPPPAAQAQ------KVAELAATPDAPLLNYRVAWPQATLHG 78 (637)
T ss_pred cCCCccccCCccceeeecchhhc-------h-hheeecCCCchHHHH------HHHHhccCCCCcchhhhhcccHHHhhC
Confidence 34567899999999996432221 1 235554322221111 11122 2235664432 122
Q ss_pred eeecCceEEEEEeecCCCch-HHHH----HhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEE
Q 011302 157 EFEASHYSCLVMEYCPGGDL-YAAR----QRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIM 231 (489)
Q Consensus 157 ~~~~~~~~~lV~E~~~gg~L-~~~l----~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vk 231 (489)
- ..+...-++|..++|..= ..++ +++....+.+.-....++.|+.+.+-||+.|.+-+|+.++|+|+++++.|.
T Consensus 79 ~-~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~ 157 (637)
T COG4248 79 G-RRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVV 157 (637)
T ss_pred C-CccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEE
Confidence 1 122337788998877532 1221 122223467888899999999999999999999999999999999999999
Q ss_pred EcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccc
Q 011302 232 LSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQEL 311 (489)
Q Consensus 232 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (489)
|.|=..--.+
T Consensus 158 LVdsDsfqi~---------------------------------------------------------------------- 167 (637)
T COG4248 158 LVDSDSFQIN---------------------------------------------------------------------- 167 (637)
T ss_pred EEcccceeec----------------------------------------------------------------------
Confidence 9874311000
Q ss_pred cCCccccccccccCCccccCCCCccCcchhc-----CCCCCCcccHHHHHHHHHHHhhC-CCCCCCC
Q 011302 312 LDDPEVVAEPINARSKSFVGTHEYLAPEVIS-----GQGHGSAVDWWTLGVFLYEMLYG-TTPFKGE 372 (489)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~~DiwSlGvil~elltG-~~Pf~~~ 372 (489)
........-+|.+.|.+||.-. +..-+...|.|.|||++++||.| +.||.|.
T Consensus 168 ---------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 168 ---------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred ---------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 0011123347999999999865 33446789999999999999986 9999874
No 456
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.58 E-value=6e-09 Score=106.79 Aligned_cols=246 Identities=18% Similarity=0.190 Sum_probs=158.9
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCC-cccccceeecCce
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF-LPTLYAEFEASHY 163 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~~~~~~~~~ 163 (489)
.+.....+++|+++++++.+... .+....+.+... .....++++|.+++||| .+..++-++.+..
T Consensus 243 ws~~fh~fvK~altknpKkRpta------eklL~h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~ 308 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTA------EKLLQHPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDY 308 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCCh------hhheeceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccc
Confidence 45555668899999999987553 222335555443 11223788999999999 8888888888889
Q ss_pred EEEEEeecCCC-chHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 164 SCLVMEYCPGG-DLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 164 ~~lV~E~~~gg-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
..++|+++.+| +-...+... .-.|...+...+.+.-+++|++||+.-=+||| |||..+ +.+|..||+.+..+.
T Consensus 309 ~~i~~~i~s~~rs~~~~~~~s-e~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~ 382 (829)
T KOG0576|consen 309 LWIPMRICSTGRSSALEMTVS-EIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLT 382 (829)
T ss_pred cchhhhhhcCCccccccCChh-hHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccC
Confidence 99999999877 222111110 12244444555677778899999998778999 777664 788999999863221
Q ss_pred cCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccccccccccccccccccCCCCCCccccCCcccccccc
Q 011302 243 VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPI 322 (489)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (489)
..
T Consensus 383 ~~------------------------------------------------------------------------------ 384 (829)
T KOG0576|consen 383 RT------------------------------------------------------------------------------ 384 (829)
T ss_pred cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred ccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHH
Q 011302 323 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEV 402 (489)
Q Consensus 323 ~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~ 402 (489)
-...++.+|+.|+|||++....+....|.|++|+--.+|--|.+|-.. +......+-.++-. +..... ..|. .
T Consensus 385 -~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~--P~~~~~~~g~~p~s-~~L~~~--~aw~-~ 457 (829)
T KOG0576|consen 385 -MKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS--PPAVLPMIGNGPNS-PMLTDK--SAWS-P 457 (829)
T ss_pred -cccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC--CccccCCCCCCCCc-cccchh--hhcC-c
Confidence 023456799999999999999999999999999987788877777533 11111111111000 000000 0000 0
Q ss_pred hhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCC
Q 011302 403 VKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 439 (489)
Q Consensus 403 ~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~ 439 (489)
..=.++...|+..-|..|.... .++.|.+|++-
T Consensus 458 ~~~~~~~~~~~~g~P~~pkv~m----gacfsKvfngC 490 (829)
T KOG0576|consen 458 VFHRDFPAPCLNGLPPTPKVHM----GACFSKVFNGC 490 (829)
T ss_pred ccccCCcccccCCCCCCCcchh----hHHHHHHhccC
Confidence 0012466778888888888776 77778888753
No 457
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.41 E-value=2.1e-06 Score=89.40 Aligned_cols=143 Identities=23% Similarity=0.209 Sum_probs=89.3
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH-------------------------------HHHHHH---
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI-------------------------------RKKLHR--- 135 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~-------------------------------~~~~~~--- 135 (489)
..|+.++-|.||+|+.++ ++.||||+.+...... .+..+.
T Consensus 131 ~PiAsASIaQVH~A~L~s------G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 131 EPIASASIAQVHRAVLKS------GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred CchhhhhHhhheeEEecC------CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 578999999999999985 6889999986421110 001111
Q ss_pred ---HHHHHHHHHhC-----CCCCcccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHH-HHH
Q 011302 136 ---ADMEKVILTML-----DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLA-LEY 206 (489)
Q Consensus 136 ---~~~E~~~l~~l-----~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~-L~y 206 (489)
+.+|..-+.++ +.++|.--.=+++-...-.|+|||++|..+.+...... ..++... ++..++.+ +.-
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~---ia~~~~~~f~~q 280 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKE---LAELLVRAFLRQ 280 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHH---HHHHHHHHHHHH
Confidence 12344444433 23443211112333455679999999999877643221 2344333 23322222 233
Q ss_pred HHhCCCeeecCCCCCeEeccCCcEEEcccCCCcccc
Q 011302 207 LHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 242 (489)
Q Consensus 207 LH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~ 242 (489)
+=..|++|.|..|.||+++.+|.+.+.|||+...+.
T Consensus 281 ~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 281 LLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHhcCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 334899999999999999999999999999975543
No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.41 E-value=1.9e-06 Score=80.97 Aligned_cols=134 Identities=13% Similarity=0.065 Sum_probs=80.8
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCC--cccccceeecCceEEEE
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF--LPTLYAEFEASHYSCLV 167 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~~~~~~~~~lV 167 (489)
..||+|..+.||+.. +..+++|...... ....+.+|..+++.+..-+ +.+.+++..+.+..++|
T Consensus 7 ~~i~~G~t~~~y~~~---------~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv 72 (226)
T TIGR02172 7 TQTGEGGNGESYTHK---------TGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLI 72 (226)
T ss_pred eeecCCCCcceeEec---------CCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeee
Confidence 578999999999832 2235778875422 1123456888888876433 56778877788888999
Q ss_pred EeecCCCc-hH--------------H----H---HHhCCCCCCChhhH-HHHHH----------HHHH-HHHHHH----h
Q 011302 168 MEYCPGGD-LY--------------A----A---RQRQPGKRFGISSA-KFYAA----------ETLL-ALEYLH----M 209 (489)
Q Consensus 168 ~E~~~gg~-L~--------------~----~---l~~~~~~~l~~~~~-~~i~~----------qi~~-~L~yLH----~ 209 (489)
||+++|.+ +. . + ++..+......... ..+.. .+.. ...+|. .
T Consensus 73 ~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~ 152 (226)
T TIGR02172 73 YELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDT 152 (226)
T ss_pred eeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCC
Confidence 99998863 11 1 0 11110011111110 01100 0111 122222 1
Q ss_pred CCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 210 MGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 210 ~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
..++|+|+.|.||+++.++ +.|+||+.+
T Consensus 153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a 180 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGKG-TYWIDLGDF 180 (226)
T ss_pred CceEecCCCCCcEEEcCCC-cEEEechhc
Confidence 2478999999999999888 999999987
No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.39 E-value=1.1e-06 Score=81.29 Aligned_cols=135 Identities=21% Similarity=0.212 Sum_probs=87.4
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHH---------------------HHHHHHHHHHHhCC--
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKL---------------------HRADMEKVILTMLD-- 147 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~---------------------~~~~~E~~~l~~l~-- 147 (489)
.|..|--+.||+|... .+..+|+|+.+.....-+... .-...|..-|+++.
T Consensus 55 ~istGKEA~Vy~a~~~------~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA 128 (268)
T COG1718 55 CISTGKEANVYLAETG------DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA 128 (268)
T ss_pred eecCCcceEEEeeccC------CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 5666777789999864 367899999975443322210 01223444444442
Q ss_pred CCCcccccceeecCceEEEEEeecCCCchH-HHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCeeecCCCCCeEec
Q 011302 148 HPFLPTLYAEFEASHYSCLVMEYCPGGDLY-AARQRQPGKRFGISSAKFYAAETLLALEYLHM-MGIVYRDLKPENVLVR 225 (489)
Q Consensus 148 hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~-~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDIKp~NILl~ 225 (489)
+-.+.+-+++. +-.|||||+....+- =.|. .-.+...++..+..++++.+.-|-. .++||+||..=|||+.
T Consensus 129 GVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk---Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~ 201 (268)
T COG1718 129 GVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLK---DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH 201 (268)
T ss_pred CCCCCCceeec----CCeEEEEeccCCCCCCCCcc---cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE
Confidence 22333333332 236999999443110 0111 1233444688888999999998887 8999999999999999
Q ss_pred cCCcEEEcccCCCc
Q 011302 226 EDGHIMLSDFDLSF 239 (489)
Q Consensus 226 ~~~~vkl~DFG~a~ 239 (489)
++.+.|+|||-|.
T Consensus 202 -~~~p~iID~~QaV 214 (268)
T COG1718 202 -DGEPYIIDVSQAV 214 (268)
T ss_pred -CCeEEEEECcccc
Confidence 8999999999874
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.35 E-value=5e-06 Score=78.05 Aligned_cols=139 Identities=27% Similarity=0.331 Sum_probs=80.5
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCC--Cccccccee---ecCce
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP--FLPTLYAEF---EASHY 163 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp--nIv~l~~~~---~~~~~ 163 (489)
++.|+.|..+.||++...+ ..|++|..... .....+..|..+++.+... .+.+++... .....
T Consensus 2 i~~l~~G~~n~~~~v~~~~-------~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~ 69 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-------GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGF 69 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-------SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSE
T ss_pred CccCCCCCeeeEEEEEECC-------cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeeccccccccc
Confidence 5689999999999998764 47899998765 1223444577777777533 355666533 23345
Q ss_pred EEEEEeecCCCchHH----------------HH---HhC--CCCCCChhh------HHH---H------------HHHHH
Q 011302 164 SCLVMEYCPGGDLYA----------------AR---QRQ--PGKRFGISS------AKF---Y------------AAETL 201 (489)
Q Consensus 164 ~~lV~E~~~gg~L~~----------------~l---~~~--~~~~l~~~~------~~~---i------------~~qi~ 201 (489)
.+++|++++|..+.. .+ +.. ....+.... ... . ...+.
T Consensus 70 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (239)
T PF01636_consen 70 PYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELE 149 (239)
T ss_dssp EEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred ceEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHH
Confidence 799999999987766 11 111 111111100 000 0 11122
Q ss_pred H-HHHHHHh-------CCCeeecCCCCCeEec-cCCcEEEcccCCCc
Q 011302 202 L-ALEYLHM-------MGIVYRDLKPENVLVR-EDGHIMLSDFDLSF 239 (489)
Q Consensus 202 ~-~L~yLH~-------~~iiHrDIKp~NILl~-~~~~vkl~DFG~a~ 239 (489)
. .+..+++ ..+||+|+.|.|||++ .++.+-|+||+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 150 ERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 2 3333332 3599999999999999 66777899999873
No 461
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.31 E-value=4.3e-06 Score=91.71 Aligned_cols=206 Identities=20% Similarity=0.239 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHhCCCCCcccccceeecCc----eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh
Q 011302 134 HRADMEKVILTMLDHPFLPTLYAEFEASH----YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM 209 (489)
Q Consensus 134 ~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~ 209 (489)
.....|...+..+.|+|++.++.+-.... .+.+..|+|.+-++...++.. ...+....+.+..++++||+|+|+
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHHH
Confidence 34455777888899999999998765433 234566889999998888775 678889999999999999999999
Q ss_pred CCCeeecCCCC---CeEeccCCcEEEc--ccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCcccccccccc
Q 011302 210 MGIVYRDLKPE---NVLVREDGHIMLS--DFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSH 284 (489)
Q Consensus 210 ~~iiHrDIKp~---NILl~~~~~vkl~--DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (489)
....|.-+-.. +--.+..+.+.++ ||+....+....
T Consensus 305 ~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~--------------------------------------- 345 (1351)
T KOG1035|consen 305 LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNE--------------------------------------- 345 (1351)
T ss_pred hccceeEEecccccccccCccceeecchhhhcccccCCCcc---------------------------------------
Confidence 96666655544 4444555666666 777653332111
Q ss_pred ccccccccccccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCc--ccHHHHHHHHHHH
Q 011302 285 GKKNKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSA--VDWWTLGVFLYEM 362 (489)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~--~DiwSlGvil~el 362 (489)
......-+..|.++|......+..+ .|+|.+|..+..+
T Consensus 346 ----------------------------------------~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~ 385 (1351)
T KOG1035|consen 346 ----------------------------------------KSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQL 385 (1351)
T ss_pred ----------------------------------------cchhhcCccccccccccccccchhhhhhHHHHHHHHHhhh
Confidence 1111233456888888877766544 6999999999999
Q ss_pred hhCCCCCCCCCcHHHHHHHhcCCCCCCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCCCChHHHHcCCCcCCCCcc
Q 011302 363 LYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 442 (489)
Q Consensus 363 ltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~~~~~~ll~hp~f~~~~~~ 442 (489)
..|..+-.... ....++.. .... ...+++.+|+..++++|+++. +++.|+|.+.-.-.
T Consensus 386 ~~~~~i~~~~~---~~~~~l~~---------~~~~------~~~d~~~~~~~~~~~~Rl~~~----~ll~~~f~~~~~~~ 443 (1351)
T KOG1035|consen 386 SQGEDISEKSA---VPVSLLDV---------LSTS------ELLDALPKCLDEDSEERLSAL----ELLTHPFLRFPTDN 443 (1351)
T ss_pred hhcCccccccc---chhhhhcc---------ccch------hhhhhhhhhcchhhhhccchh----hhhhchhccccccc
Confidence 98765522111 11111110 0000 267899999999999999998 99999998765433
No 462
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.27 E-value=8.3e-06 Score=73.96 Aligned_cols=128 Identities=27% Similarity=0.333 Sum_probs=91.3
Q ss_pred CCceeeeeeccCCc-eeEEEEEEccCCCCCCCeeEEEEeeeh----------HHHH--------HHHHHHHHHHHHHHHH
Q 011302 84 DHFRLLRRLGSGDI-GNVYLCQIRNPMVGLPQCFYAMKVVDR----------EALA--------IRKKLHRADMEKVILT 144 (489)
Q Consensus 84 ~~y~~~~~lG~G~f-g~Vy~a~~~~~~~~~~~~~~aiK~~~~----------~~~~--------~~~~~~~~~~E~~~l~ 144 (489)
.+++.++.||.|.- |.||+++..+ +.||+|+++. +... ......-+..|.+...
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g-------~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfg 109 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDG-------RIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFG 109 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECC-------eEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhH
Confidence 68999999999999 9999999875 6899999321 0000 0123345677888776
Q ss_pred hCC---CCCc--ccccceeecC------------------ceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHH
Q 011302 145 MLD---HPFL--PTLYAEFEAS------------------HYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETL 201 (489)
Q Consensus 145 ~l~---hpnI--v~l~~~~~~~------------------~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~ 201 (489)
+|+ +.++ |+.+|+..-. ....||.||++... .+... -+.+|.
T Consensus 110 RLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~~----~~~~~~ 174 (207)
T PF13095_consen 110 RLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQIR----DIPQML 174 (207)
T ss_pred HHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccchh----HHHHHH
Confidence 664 5566 8888877211 12467888876543 12222 256788
Q ss_pred HHHHHHHhCCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 202 LALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 202 ~~L~yLH~~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
+-|..+|..||+-+|+|+.|.. .-||+|||.+
T Consensus 175 ~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 175 RDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence 8889999999999999999997 4589999964
No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.26 E-value=6.9e-06 Score=78.13 Aligned_cols=136 Identities=18% Similarity=0.070 Sum_probs=80.5
Q ss_pred eeccCCc-eeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCcccccceeecCceEEEEE
Q 011302 91 RLGSGDI-GNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFLPTLYAEFEASHYSCLVM 168 (489)
Q Consensus 91 ~lG~G~f-g~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lV~ 168 (489)
.|-.|.. ..||++...+ ..+.+|+..... ...+..|+.+++.+. +--+.+++++...++..++||
T Consensus 5 ~~~~g~~~~~v~~~~~~~-------~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 71 (244)
T cd05150 5 RVTEGQSGATVYRLDGKN-------PGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLT 71 (244)
T ss_pred ecCCCCCcCeEEEEcCCC-------CcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEE
Confidence 3445555 7899986432 356788776432 123445888887774 344667787777667789999
Q ss_pred eecCCCchHHHH-------------------HhCCC--CCCChh--hHHHH-----------------------HHHHHH
Q 011302 169 EYCPGGDLYAAR-------------------QRQPG--KRFGIS--SAKFY-----------------------AAETLL 202 (489)
Q Consensus 169 E~~~gg~L~~~l-------------------~~~~~--~~l~~~--~~~~i-----------------------~~qi~~ 202 (489)
|+++|.+|.... +..+. ..+... ..... ..++..
T Consensus 72 e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (244)
T cd05150 72 SAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYA 151 (244)
T ss_pred EeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHH
Confidence 999987765321 11111 011100 00000 111111
Q ss_pred HHHHH----HhCCCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 203 ALEYL----HMMGIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 203 ~L~yL----H~~~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
.|... ....++|+|+.|.|||++.++.+.|+||+.|.
T Consensus 152 ~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 152 ELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred HHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 11111 12348999999999999998888999999873
No 464
>PLN02876 acyl-CoA dehydrogenase
Probab=98.17 E-value=9.6e-06 Score=90.61 Aligned_cols=83 Identities=20% Similarity=0.318 Sum_probs=55.9
Q ss_pred eeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC-CCCc--ccccceeecC---
Q 011302 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD-HPFL--PTLYAEFEAS--- 161 (489)
Q Consensus 88 ~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnI--v~l~~~~~~~--- 161 (489)
-++.|+.|.+..+|+....... ....|++|+....... .....+.+|..+|+.+. |.+| .+++.++.+.
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~---~~~~~VLR~~p~~~~~--~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~ 116 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGG---SVKRYVLRKKPPGKLL--QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVI 116 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCC---cceeEEEEeCCCCccC--ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcC
Confidence 3678899999999998765421 1235677765432211 11234567999999985 6664 7778777664
Q ss_pred ceEEEEEeecCCCc
Q 011302 162 HYSCLVMEYCPGGD 175 (489)
Q Consensus 162 ~~~~lV~E~~~gg~ 175 (489)
+..|+||||++|..
T Consensus 117 G~~flVME~v~G~~ 130 (822)
T PLN02876 117 GTAFYIMEYLEGRI 130 (822)
T ss_pred CCceEEEEecCCcc
Confidence 46789999998764
No 465
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.10 E-value=1.8e-05 Score=82.24 Aligned_cols=140 Identities=20% Similarity=0.215 Sum_probs=85.6
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH----------------------------HHHHHH------
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI----------------------------RKKLHR------ 135 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~----------------------------~~~~~~------ 135 (489)
+.||..+.|.||+|+.++ ++.||||+-+...... ++....
T Consensus 167 ~piaaASlaQVhrA~L~~------G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD 240 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN------GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD 240 (538)
T ss_pred chhhhcchhheEEEEecC------CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence 579999999999999986 6789999975321110 000111
Q ss_pred HHHHHH----HHHhCCCCC------cccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHH
Q 011302 136 ADMEKV----ILTMLDHPF------LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALE 205 (489)
Q Consensus 136 ~~~E~~----~l~~l~hpn------Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~ 205 (489)
+..|.. +.+.+.|-+ |.++|..+ ...-.|+||||+|.-+.++..-.. ..++...+..-+.++..-
T Consensus 241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~-~gi~~~~i~~~l~~~~~~-- 315 (538)
T KOG1235|consen 241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDK-RGISPHDILNKLVEAYLE-- 315 (538)
T ss_pred hHHHHHhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHH-cCCCHHHHHHHHHHHHHH--
Confidence 122222 222334444 45554333 234679999999988765432211 235555433333322222
Q ss_pred HHHhCCCeeecCCCCCeEecc----CCcEEEcccCCCcc
Q 011302 206 YLHMMGIVYRDLKPENVLVRE----DGHIMLSDFDLSFK 240 (489)
Q Consensus 206 yLH~~~iiHrDIKp~NILl~~----~~~vkl~DFG~a~~ 240 (489)
-|=..|++|.|=.|.||+++. ++.+.+-|||+...
T Consensus 316 qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~ 354 (538)
T KOG1235|consen 316 QIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAV 354 (538)
T ss_pred HHHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccc
Confidence 222468999999999999994 57899999999743
No 466
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.09 E-value=5.7e-05 Score=69.05 Aligned_cols=134 Identities=19% Similarity=0.199 Sum_probs=90.4
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHH-------------HHHHHHHHHHHHHHHHhCC------CCC
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA-------------IRKKLHRADMEKVILTMLD------HPF 150 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~-------------~~~~~~~~~~E~~~l~~l~------hpn 150 (489)
..||+|+.=.||.--.. ....||+....... ......+..+|+.....+. +.+
T Consensus 7 ~~i~~G~~R~cy~HP~d--------p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~ 78 (199)
T PF10707_consen 7 DLIAQGGERDCYQHPDD--------PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSH 78 (199)
T ss_pred cccccCCCceEEECCCC--------CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccc
Confidence 46899999999963322 23478888765500 0011233444554444443 789
Q ss_pred cccccceeecCceEEEEEeecCC------CchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEe
Q 011302 151 LPTLYAEFEASHYSCLVMEYCPG------GDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLV 224 (489)
Q Consensus 151 Iv~l~~~~~~~~~~~lV~E~~~g------g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl 224 (489)
|.+++|+.+++.-.-+|+|.+.+ -+|.+++.. ..+++ .. ...+-.-.+||-+++|+.+||+|.||++
T Consensus 79 i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~~---~~~L~~f~~~l~~~~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 79 IPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE---GGLTE-EL---RQALDEFKRYLLDHHIVIRDLNPHNIVV 151 (199)
T ss_pred cccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc---CCccH-HH---HHHHHHHHHHHHHcCCeecCCCcccEEE
Confidence 99999999999999999999754 256777754 34554 22 3334455578889999999999999999
Q ss_pred ccC--C--cEEEcc-cCCC
Q 011302 225 RED--G--HIMLSD-FDLS 238 (489)
Q Consensus 225 ~~~--~--~vkl~D-FG~a 238 (489)
... + .+.|+| ||-.
T Consensus 152 ~~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 152 QRRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred EecCCCceEEEEEeCCCCc
Confidence 743 2 588888 7764
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.00 E-value=3.8e-05 Score=72.64 Aligned_cols=29 Identities=28% Similarity=0.252 Sum_probs=25.2
Q ss_pred CCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 211 GIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 211 ~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
++||+|+.+.|||++.++..-|+||+.+.
T Consensus 165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred eEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 48999999999999876656799999873
No 468
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.96 E-value=2.3e-05 Score=71.18 Aligned_cols=96 Identities=27% Similarity=0.314 Sum_probs=78.1
Q ss_pred HHHHHHHhCCC-CCcccccceeecCceEEEEEeecCCCchHHH---HHhCCCCCCChhhHHHHHHHHHHHHHHHHh---C
Q 011302 138 MEKVILTMLDH-PFLPTLYAEFEASHYSCLVMEYCPGGDLYAA---RQRQPGKRFGISSAKFYAAETLLALEYLHM---M 210 (489)
Q Consensus 138 ~E~~~l~~l~h-pnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~---l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~---~ 210 (489)
.|..+|+.+++ +++++++|+|-. ++|+||...+++... +.. ....++..+..|+.+++..+++|+. .
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~--~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQ--FLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCcccccccccccc--ccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 48888888876 699999999843 578999987776421 111 1246789999999999999999997 3
Q ss_pred CCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 211 GIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 211 ~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
.+.-.|++++|+-++.+|++|++|...+.
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~ 110 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVF 110 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcc
Confidence 58889999999999999999999998763
No 469
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.92 E-value=2.9e-05 Score=68.25 Aligned_cols=129 Identities=26% Similarity=0.282 Sum_probs=89.6
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCc-ccccceeecCceE
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL-PTLYAEFEASHYS 164 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~~~ 164 (489)
.++.+.||+|++|.||+|.+++ ..+|+|+-+.+. ....+..|+.+|..+.--++ .++|.+-.+
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~~-------~~~a~Kvrr~ds-----~r~~l~kEakiLeil~g~~~~p~vy~yg~~---- 87 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWRG-------GEVALKVRRRDS-----PRRNLEKEAKILEILAGEGVTPEVYFYGED---- 87 (201)
T ss_pred hhhhhhhhcccccEEEEeeccC-------ceEEEEEecCCc-----chhhHHHHHHHHHHhhhcCCCceEEEechh----
Confidence 3456789999999999999886 467899876543 23445669999988876665 345544333
Q ss_pred EEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCC-CCCeEeccCCcEEEcccCCCc
Q 011302 165 CLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLK-PENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 165 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIK-p~NILl~~~~~vkl~DFG~a~ 239 (489)
++.|||+.|-.|.++-.. .+ +.-+..+++.---|-..||-|..|. |...+|..++.+.|+||.-|+
T Consensus 88 ~i~me~i~G~~L~~~~~~-----~~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 88 FIRMEYIDGRPLGKLEIG-----GD----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred hhhhhhhcCcchhhhhhc-----cc----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchh
Confidence 355999988888654431 11 2224456666556677899999885 455555556699999999884
No 470
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.81 E-value=4.9e-06 Score=93.16 Aligned_cols=156 Identities=13% Similarity=0.013 Sum_probs=116.1
Q ss_pred HHHHHHHHhCCCCCcccccceee--cCceEEEEEeecCCCchHHHHHhCCC--CCCChhhHHHHHHHHHHHHHHHHhCC-
Q 011302 137 DMEKVILTMLDHPFLPTLYAEFE--ASHYSCLVMEYCPGGDLYAARQRQPG--KRFGISSAKFYAAETLLALEYLHMMG- 211 (489)
Q Consensus 137 ~~E~~~l~~l~hpnIv~l~~~~~--~~~~~~lV~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~- 211 (489)
..|+..++...|+++...+.-.. .....|.+++|+.+|.++..+.+.-. ..+...-+.....+.+.+..-+|+..
T Consensus 1277 l~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tn 1356 (2724)
T KOG1826|consen 1277 LSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTN 1356 (2724)
T ss_pred hhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhccc
Confidence 34555666678999887666443 34467899999999999998876421 22333333344444477778877642
Q ss_pred ----CeeecCCCCCeEeccCCcEEEcccCCCcccccCccccCCcchhHHHhhhhccCCCCCCCCCCCccccccccccccc
Q 011302 212 ----IVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCFSSVSHGKK 287 (489)
Q Consensus 212 ----iiHrDIKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (489)
.+|++||+-|.+|..+..+|+.++|+++...+
T Consensus 1357 lg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp-------------------------------------------- 1392 (2724)
T KOG1826|consen 1357 LGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP-------------------------------------------- 1392 (2724)
T ss_pred CCccchhhhhhhhccceecCCcccccccccccccCc--------------------------------------------
Confidence 79999999999999999999999999852111
Q ss_pred cccccccccccccccCCCCCCccccCCccccccccccCCccccCCCCccCcchhcCCCCCCcccHHHHHHHHHHHhhCCC
Q 011302 288 NKKKAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTT 367 (489)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~~DiwSlGvil~elltG~~ 367 (489)
.....+..++++.|+.|++.....++.++|+|..|+-+|++.-|..
T Consensus 1393 ----------------------------------~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~ 1438 (2724)
T KOG1826|consen 1393 ----------------------------------VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNA 1438 (2724)
T ss_pred ----------------------------------hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccH
Confidence 0112345578999999999998889988999999999999999988
Q ss_pred CCC
Q 011302 368 PFK 370 (489)
Q Consensus 368 Pf~ 370 (489)
+|.
T Consensus 1439 ~fi 1441 (2724)
T KOG1826|consen 1439 YFI 1441 (2724)
T ss_pred HHH
Confidence 874
No 471
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.75 E-value=0.00022 Score=67.35 Aligned_cols=76 Identities=22% Similarity=0.356 Sum_probs=47.0
Q ss_pred eeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCC-CcccccceeecCceEEEE
Q 011302 89 LRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP-FLPTLYAEFEASHYSCLV 167 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp-nIv~l~~~~~~~~~~~lV 167 (489)
++.|..|-...||++...+. .++.|.+|+...... ......+|..+++.+... .++++++.+.. .+|
T Consensus 3 i~~l~gG~tN~~~~v~~~~~----~~~~~vlR~~~~~~~----~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l 70 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKED----NQDAVLVRVYGNKTE----LIIDRERELRIHKLLSKHGLAPKLYATFQN----GLI 70 (235)
T ss_pred EEEcCCcccceEEEEEcCCC----CCCeEEEEEccCCcc----ceecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEE
Confidence 45788888889999875420 135678887754211 112233588888887533 34555544332 389
Q ss_pred EeecCCCch
Q 011302 168 MEYCPGGDL 176 (489)
Q Consensus 168 ~E~~~gg~L 176 (489)
|||++|.++
T Consensus 71 ~e~i~G~~l 79 (235)
T cd05157 71 YEFIPGRTL 79 (235)
T ss_pred EEeeCCCcC
Confidence 999998765
No 472
>PRK10593 hypothetical protein; Provisional
Probab=97.74 E-value=0.00027 Score=69.23 Aligned_cols=80 Identities=14% Similarity=0.084 Sum_probs=54.6
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCC---CCcccccceeec-
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDH---PFLPTLYAEFEA- 160 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~l~~~~~~- 160 (489)
...-.+.||.|..+.||+....+ ..+.+|..+.. .....+..|...|+.+.- -.|.++++++..
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~~-------~~~~~k~~~~~-----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~ 82 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDSQ-------GNPMPLMARSF-----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHE 82 (297)
T ss_pred hhheeeecCCccceeEEEEEcCC-------CCEEEEEeccc-----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccC
Confidence 34446789999999999986543 23566764321 011345568888888753 357788877654
Q ss_pred --CceEEEEEeecCCCch
Q 011302 161 --SHYSCLVMEYCPGGDL 176 (489)
Q Consensus 161 --~~~~~lV~E~~~gg~L 176 (489)
.+..|||||+++|+++
T Consensus 83 ~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 83 QSPGPDVLLLERLRGVSV 100 (297)
T ss_pred CcCCCeEEEEeccCCEec
Confidence 3668999999998754
No 473
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.68 E-value=0.00019 Score=70.24 Aligned_cols=141 Identities=17% Similarity=0.188 Sum_probs=82.2
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCC--Ccccccce-----
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP--FLPTLYAE----- 157 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp--nIv~l~~~----- 157 (489)
+..-++.|..|....+|++...+ ..+++|+..... ...+..|..++..+.+- .+.+.+..
T Consensus 15 ~~~~i~~i~~G~~n~~y~v~~~~-------~~~vLr~~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~ 81 (296)
T cd05153 15 ELLSFEGISAGIENTNYFVTTDS-------GRYVLTLFEKVS------AEELPFFLALLDHLAERGLPVPRPIADRDGEY 81 (296)
T ss_pred chhheecccCccccceEEEEeCC-------CcEEEEEcCCCC------hHhccHHHHHHHHHHHCCCCCCccccCCCCcE
Confidence 44446778888888999986543 357889876411 12344477777776432 24454442
Q ss_pred -eecCceEEEEEeecCCCchHH--------------HHHhC----CCC-----CCChhhH----------HHHHHHHHHH
Q 011302 158 -FEASHYSCLVMEYCPGGDLYA--------------ARQRQ----PGK-----RFGISSA----------KFYAAETLLA 203 (489)
Q Consensus 158 -~~~~~~~~lV~E~~~gg~L~~--------------~l~~~----~~~-----~l~~~~~----------~~i~~qi~~~ 203 (489)
...++..++|++|++|..+.. .++.. ... ...+... ......+..+
T Consensus 82 ~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 161 (296)
T cd05153 82 LSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADE 161 (296)
T ss_pred eeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHH
Confidence 123456789999999866421 01110 000 0000000 0011112334
Q ss_pred HHHHHh-------CCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 204 LEYLHM-------MGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 204 L~yLH~-------~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
+.++.. .++||+|+.|.|||++.++.+.|+||+.+
T Consensus 162 ~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a 203 (296)
T cd05153 162 LARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFA 203 (296)
T ss_pred HHHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhh
Confidence 444443 46999999999999998877899999987
No 474
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.60 E-value=0.00056 Score=69.28 Aligned_cols=81 Identities=19% Similarity=0.185 Sum_probs=52.8
Q ss_pred eeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHH--H--HHHHHHHHHHHHHHHhCC---CCCcccccceeec
Q 011302 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALA--I--RKKLHRADMEKVILTMLD---HPFLPTLYAEFEA 160 (489)
Q Consensus 88 ~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~--~--~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~ 160 (489)
-.+.||.|.+..||++...++ .+.|.||.-...... . .-...+...|.+.|..+. ..++++++.+ +
T Consensus 30 ~~~elggGn~N~VyrV~~~~g-----~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D 102 (401)
T PRK09550 30 TAREIGDGNLNLVFRVSDTEG-----GKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--D 102 (401)
T ss_pred eeeEcCCCceEEEEEEEeCCC-----CeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--C
Confidence 457899999999999997641 246788874311100 0 012345566777777753 3457777765 4
Q ss_pred CceEEEEEeecCCCc
Q 011302 161 SHYSCLVMEYCPGGD 175 (489)
Q Consensus 161 ~~~~~lV~E~~~gg~ 175 (489)
.+..++||||+++..
T Consensus 103 ~~~~~lVME~L~~~~ 117 (401)
T PRK09550 103 EELAVTVMEDLSDHK 117 (401)
T ss_pred CCCCEEEEecCCCcc
Confidence 456789999998643
No 475
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.59 E-value=0.00076 Score=66.51 Aligned_cols=143 Identities=20% Similarity=0.228 Sum_probs=81.9
Q ss_pred cCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCC--ccccccee--
Q 011302 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF--LPTLYAEF-- 158 (489)
Q Consensus 83 ~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~~-- 158 (489)
++....++.++.|.-..||++...+ ..|.+|+..... ....+..|..++..|...+ |.+.+...
T Consensus 21 ~~~~~~i~~~~~G~~n~~y~v~t~~-------~~~vLK~~~~~~-----~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g 88 (307)
T TIGR00938 21 LGELLSLKGIAEGVENSNYLLTTDV-------GRYILTLYEKRV-----KAEELPFFLALTTHLAARGLPVPKPVKSRDG 88 (307)
T ss_pred CCCceeccccCCccccceEEEEeCC-------CcEEEEEecCCC-----CHHHHHHHHHHHHHHHHCCCCCCccccCCCC
Confidence 3445567788888888999986442 247788765421 0112233556666663212 34444321
Q ss_pred ----ecCceEEEEEeecCCCchH-----------H---HHHhCCCCCCC--------hh---h--HH----------HHH
Q 011302 159 ----EASHYSCLVMEYCPGGDLY-----------A---ARQRQPGKRFG--------IS---S--AK----------FYA 197 (489)
Q Consensus 159 ----~~~~~~~lV~E~~~gg~L~-----------~---~l~~~~~~~l~--------~~---~--~~----------~i~ 197 (489)
..++..++||||++|..+. . .++... ..++ .. . .. ...
T Consensus 89 ~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~-~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~ 167 (307)
T TIGR00938 89 RQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAG-AHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMG 167 (307)
T ss_pred CeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhh-ccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHH
Confidence 2345678999999885431 0 111110 0010 00 0 00 011
Q ss_pred HHHHHHHHHHHh-------CCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 198 AETLLALEYLHM-------MGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 198 ~qi~~~L~yLH~-------~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
..+...++++.. .++||+|+.+.||+++.++.+.|+||+.+
T Consensus 168 ~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~ 215 (307)
T TIGR00938 168 AELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFA 215 (307)
T ss_pred HHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccc
Confidence 223345555542 57999999999999998887789999987
No 476
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.57 E-value=0.00029 Score=67.48 Aligned_cols=134 Identities=18% Similarity=0.179 Sum_probs=74.9
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCc-ccccceeecCceEEEEEe
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL-PTLYAEFEASHYSCLVME 169 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~~~~lV~E 169 (489)
.+..|-...+|+.... +..|.+|+....... ..-....|..+++.+..-++ .+++.... -++|||
T Consensus 3 ~~~~G~tn~~y~~~~~-------~~~~vlR~~~~~~~~---~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e 68 (256)
T TIGR02721 3 TLSGGLTNRSWRIEHP-------GISFVWRPQSPVCKA---LGVDRQREYQILQALSALGLAPKPILVNE----HWLLVE 68 (256)
T ss_pred cCCCcCcCCeEEEEeC-------CccEEEeeCCccccc---ccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEE
Confidence 3556777889988632 346778876543211 00123458888888764333 44444332 268999
Q ss_pred ecCCCchHH--------------HHH---hCC--CCCCChh-hHHHHHHHH---------HHHHHHHHh--------CCC
Q 011302 170 YCPGGDLYA--------------ARQ---RQP--GKRFGIS-SAKFYAAET---------LLALEYLHM--------MGI 212 (489)
Q Consensus 170 ~~~gg~L~~--------------~l~---~~~--~~~l~~~-~~~~i~~qi---------~~~L~yLH~--------~~i 212 (489)
|++|..+.. .+. ..+ +.+++.. .+..+..++ ...+..+-. ..+
T Consensus 69 ~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 148 (256)
T TIGR02721 69 WLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAP 148 (256)
T ss_pred eccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCee
Confidence 999866521 111 111 1112211 112222122 111222221 248
Q ss_pred eeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 213 VYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 213 iHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
+|+|+.|.|||++.++ +.|+||+.|.
T Consensus 149 ~H~Dl~~~Nil~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 149 LHMDVHAYNLVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred ecCCCCcCcEEEeCCC-CEEEeccccC
Confidence 9999999999999877 7899999874
No 477
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.48 E-value=0.00016 Score=69.54 Aligned_cols=134 Identities=20% Similarity=0.289 Sum_probs=91.6
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHH-----------------HHH--HHHHHHHHHHhC
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-----------------KLH--RADMEKVILTML 146 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~-----------------~~~--~~~~E~~~l~~l 146 (489)
+.++..||=|--+-||.+-+.. +..+++|.-+.....-++ .+. .+..|...|+.|
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~------G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL 167 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEE------GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKAL 167 (465)
T ss_pred hhhccccccccccceEEEecCC------CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHH
Confidence 4567889999999999998774 456677765322211111 111 235677777777
Q ss_pred C-CCC-cccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhCCCeeecCCCCCeEe
Q 011302 147 D-HPF-LPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLV 224 (489)
Q Consensus 147 ~-hpn-Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDIKp~NILl 224 (489)
. |-+ |.+.++ .+.-|+|||++.|-.|.+..+- ..+..+...+..-+.-|-.+|+||+|..-=||++
T Consensus 168 ~e~gfpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v--------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv 235 (465)
T KOG2268|consen 168 YERGFPVPKPID----HNRHCVVMELVDGYPLRQVRHV--------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMV 235 (465)
T ss_pred HHcCCCCCCccc----ccceeeHHHhhcccceeeeeec--------CChHHHHHHHHHHHHHHHHcCceecccchheeEE
Confidence 4 333 444444 3456899999999888654322 1233344555666677889999999999999999
Q ss_pred ccCCcEEEcccCC
Q 011302 225 REDGHIMLSDFDL 237 (489)
Q Consensus 225 ~~~~~vkl~DFG~ 237 (489)
.+++.++++||--
T Consensus 236 ~dd~~i~vIDFPQ 248 (465)
T KOG2268|consen 236 KDDDKIVVIDFPQ 248 (465)
T ss_pred ecCCCEEEeechH
Confidence 9999999999953
No 478
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.34 E-value=0.00092 Score=65.68 Aligned_cols=80 Identities=19% Similarity=0.255 Sum_probs=47.2
Q ss_pred eeeeccCCceeEEEEEEccCC-CCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCC-cccccceeecCceEEE
Q 011302 89 LRRLGSGDIGNVYLCQIRNPM-VGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF-LPTLYAEFEASHYSCL 166 (489)
Q Consensus 89 ~~~lG~G~fg~Vy~a~~~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~~~~~~~~~~~l 166 (489)
++.|..|-...||++...... ....++.|.+|+...... .......|..++..+...+ ..++++++.. .+
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~----~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~ 74 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE----LLIDRERELVVFARLSERNLGPKLYGIFPN----GR 74 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc----ceechHHHHHHHHHHHhCCCCCceEEEeCC----Cc
Confidence 355666777789988754310 011246788898764321 1223445877787775333 3455655542 36
Q ss_pred EEeecCCCch
Q 011302 167 VMEYCPGGDL 176 (489)
Q Consensus 167 V~E~~~gg~L 176 (489)
|+||++|..+
T Consensus 75 v~e~i~G~~l 84 (302)
T cd05156 75 IEEFIPSRTL 84 (302)
T ss_pred hhheeCCCcC
Confidence 8999988766
No 479
>PRK05231 homoserine kinase; Provisional
Probab=97.24 E-value=0.0048 Score=61.12 Aligned_cols=29 Identities=31% Similarity=0.405 Sum_probs=25.5
Q ss_pred CCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 210 MGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 210 ~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
.++||+|+.|.|||++.+...-|+||+.+
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~ 215 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFA 215 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccc
Confidence 37999999999999996655689999987
No 480
>PLN02236 choline kinase
Probab=97.03 E-value=0.0045 Score=62.01 Aligned_cols=145 Identities=14% Similarity=0.116 Sum_probs=81.2
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCC-cccccceeecCceE
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPF-LPTLYAEFEASHYS 164 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~~~~~~~~~~ 164 (489)
..-+..|-.|-.-.+|++...+... ...+.|.+|+..... ..... ...|..+++.+..-+ -.++++.+..+
T Consensus 38 ~~~i~~l~gGlTN~~y~v~~~~~~~-~~~~~~v~Ri~g~~t---~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g--- 109 (344)
T PLN02236 38 ALQVIPLKGAMTNEVFQIKWPTKEG-NLGRKVLVRIYGEGV---ELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG--- 109 (344)
T ss_pred cEEEEEcCCcccceeEEEEeCCCCC-CCCCeEEEEEccCCC---Ceeec-hHHHHHHHHHHHHcCCCCceEEEECCc---
Confidence 3334456568888999987543111 124678888876432 11112 245888888775433 34566666443
Q ss_pred EEEEeecCCCchHH--------------HHH---hCC--CC--CCChhhHHHHHHHH-----------------HHHHHH
Q 011302 165 CLVMEYCPGGDLYA--------------ARQ---RQP--GK--RFGISSAKFYAAET-----------------LLALEY 206 (489)
Q Consensus 165 ~lV~E~~~gg~L~~--------------~l~---~~~--~~--~l~~~~~~~i~~qi-----------------~~~L~y 206 (489)
.|+||++|.+|.. .+. ... +. .....++..++.++ ...+..
T Consensus 110 -~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~ 188 (344)
T PLN02236 110 -RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINL 188 (344)
T ss_pred -eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHH
Confidence 5899998876631 111 110 01 01122232332111 111112
Q ss_pred H----H----hCCCeeecCCCCCeEecc-CCcEEEcccCCCc
Q 011302 207 L----H----MMGIVYRDLKPENVLVRE-DGHIMLSDFDLSF 239 (489)
Q Consensus 207 L----H----~~~iiHrDIKp~NILl~~-~~~vkl~DFG~a~ 239 (489)
| . ...++|+|+++.|||+++ ++.+.|+||..|.
T Consensus 189 L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 189 LEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred HHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 2 2 225899999999999986 5789999999884
No 481
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.98 E-value=0.0066 Score=58.81 Aligned_cols=29 Identities=31% Similarity=0.434 Sum_probs=24.8
Q ss_pred CCeeecCCCCCeEeccCCc-EEEcccCCCc
Q 011302 211 GIVYRDLKPENVLVREDGH-IMLSDFDLSF 239 (489)
Q Consensus 211 ~iiHrDIKp~NILl~~~~~-vkl~DFG~a~ 239 (489)
.+||+|+.|.|||++.++. +-|+||+.+.
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~ 215 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAK 215 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence 3899999999999997565 5699999974
No 482
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.88 E-value=0.00098 Score=67.92 Aligned_cols=88 Identities=19% Similarity=0.215 Sum_probs=58.4
Q ss_pred CcccHHHHHHHHHHHhhCCCCCCCCCcHHHHHHHhcCCCC---CCCCCCCCchhHHHHhhHHHHHHHHhhcCcccccCCC
Q 011302 348 SAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT---FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL 424 (489)
Q Consensus 348 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---~p~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~~~~ 424 (489)
+|+|||++|.++.|+..|...+......+....|.+-... .........-.+..+....+++.+|+-..|..||...
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~ 189 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM 189 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence 3999999999999999999988777666665555432111 0000000011123334567899999999999999765
Q ss_pred CChHHHHcCCCcCCC
Q 011302 425 KGSVEIKRHEFFKGI 439 (489)
Q Consensus 425 ~~~~~ll~hp~f~~~ 439 (489)
++.+|+-|..+
T Consensus 190 ----~~~k~~i~~ev 200 (725)
T KOG1093|consen 190 ----ELSKRCSFTEV 200 (725)
T ss_pred ----HHhcCccHHHH
Confidence 77788777543
No 483
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.86 E-value=0.01 Score=58.40 Aligned_cols=28 Identities=25% Similarity=0.538 Sum_probs=25.1
Q ss_pred CCCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 210 MGIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 210 ~~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
.++||+|+.+.|||++. +.+.|+||+.+
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~ 214 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYC 214 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccc
Confidence 47899999999999987 67899999975
No 484
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.70 E-value=0.011 Score=58.33 Aligned_cols=138 Identities=24% Similarity=0.262 Sum_probs=88.8
Q ss_pred eeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH----------------------HH-HHHHHHHHHHHHHhC
Q 011302 90 RRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI----------------------RK-KLHRADMEKVILTML 146 (489)
Q Consensus 90 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~----------------------~~-~~~~~~~E~~~l~~l 146 (489)
..|..|--+.||.|...+ +..+|||+++...+.- +. ..--+..|.+-|.++
T Consensus 150 GCiSTGKEANVYHat~~d------G~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl 223 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEED------GSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRL 223 (520)
T ss_pred cccccCccceeEeeecCC------CceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHH
Confidence 456667777899987664 5679999985321110 00 111234466667776
Q ss_pred CCCCcccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHH-hCCCeeecCCCCCeEec
Q 011302 147 DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLH-MMGIVYRDLKPENVLVR 225 (489)
Q Consensus 147 ~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH-~~~iiHrDIKp~NILl~ 225 (489)
+.-.|..---... ..-.|||+|+. .+=+..-.. ....++...+..+-.|++.-|.-|- ..++||.||.-=|+|+-
T Consensus 224 ~~aGIP~PePIlL--k~hVLVM~FlG-rdgw~aPkL-Kd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh 299 (520)
T KOG2270|consen 224 NNAGIPCPEPILL--KNHVLVMEFLG-RDGWAAPKL-KDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH 299 (520)
T ss_pred HhcCCCCCCceee--ecceEeeeecc-CCCCcCccc-ccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE
Confidence 6544331111111 22469999994 433221111 1245778888888889998888875 56999999999999986
Q ss_pred cCCcEEEcccCCC
Q 011302 226 EDGHIMLSDFDLS 238 (489)
Q Consensus 226 ~~~~vkl~DFG~a 238 (489)
+|.+.|+|.+-+
T Consensus 300 -dG~lyiIDVSQS 311 (520)
T KOG2270|consen 300 -DGKLYIIDVSQS 311 (520)
T ss_pred -CCEEEEEEcccc
Confidence 789999999875
No 485
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.68 E-value=0.0035 Score=61.49 Aligned_cols=72 Identities=22% Similarity=0.268 Sum_probs=57.4
Q ss_pred cCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHhC-CCeeecCCCCCeEeccCCcEEEcccCCC
Q 011302 160 ASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHMM-GIVYRDLKPENVLVREDGHIMLSDFDLS 238 (489)
Q Consensus 160 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDIKp~NILl~~~~~vkl~DFG~a 238 (489)
...+.|++|++- |+.|.-+ ..-..+++..++++++.-++-+..+ ..=|||+.-.||||+ +|+|.|+||-++
T Consensus 297 e~~y~yl~~kdh-gt~is~i------k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfkls 368 (488)
T COG5072 297 ETLYLYLHFKDH-GTPISII------KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLS 368 (488)
T ss_pred CceEEEEEEecC-Cceeeee------ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeee
Confidence 344678889987 7777422 2244678888999988887777754 689999999999999 999999999998
Q ss_pred c
Q 011302 239 F 239 (489)
Q Consensus 239 ~ 239 (489)
+
T Consensus 369 R 369 (488)
T COG5072 369 R 369 (488)
T ss_pred e
Confidence 6
No 486
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.63 E-value=0.014 Score=58.19 Aligned_cols=76 Identities=18% Similarity=0.224 Sum_probs=47.4
Q ss_pred eeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH----HHHHHHHHHHHHHHHhCC--CC-CcccccceeecCce
Q 011302 91 RLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI----RKKLHRADMEKVILTMLD--HP-FLPTLYAEFEASHY 163 (489)
Q Consensus 91 ~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~--hp-nIv~l~~~~~~~~~ 163 (489)
.||.|...-||++...+ ..+.+.||.-..-.... .-...+...|...|+... -| .++++|. .+.+.
T Consensus 2 EigdGnlN~VfrV~~~~-----g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQE-----GDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEM 74 (370)
T ss_pred cCCCCceEEEEEEEcCC-----CCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--Ecccc
Confidence 57999999999999643 12467888754322111 112345556888887664 34 4555553 45556
Q ss_pred EEEEEeecCC
Q 011302 164 SCLVMEYCPG 173 (489)
Q Consensus 164 ~~lV~E~~~g 173 (489)
..+|||+++.
T Consensus 75 ~~~vMEdL~~ 84 (370)
T TIGR01767 75 AVTVMEDLSH 84 (370)
T ss_pred ceehHhhCcc
Confidence 6799999955
No 487
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.58 E-value=0.016 Score=58.66 Aligned_cols=77 Identities=18% Similarity=0.225 Sum_probs=49.1
Q ss_pred eeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHH----HHHHHHHHHHHHHHhCC---CCCcccccceeec
Q 011302 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR----KKLHRADMEKVILTMLD---HPFLPTLYAEFEA 160 (489)
Q Consensus 88 ~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~ 160 (489)
..+.||.|.-..||+....+ ..|.||.-........ -...+...|...|+.+. ..+|.+++.++.
T Consensus 36 ~~~eiggGn~N~VyrV~~~~-------~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de- 107 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSSS-------GSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR- 107 (418)
T ss_pred eEEEcCCCceeeEEEEEcCC-------ccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC-
Confidence 47789999999999987632 3477887542111000 12334444666666553 247888888776
Q ss_pred CceEEEEEeecCC
Q 011302 161 SHYSCLVMEYCPG 173 (489)
Q Consensus 161 ~~~~~lV~E~~~g 173 (489)
+..++||||+++
T Consensus 108 -d~~vlvME~L~~ 119 (418)
T PLN02756 108 -TMALIGMRYLEP 119 (418)
T ss_pred -CCCEEEEeecCC
Confidence 446789999976
No 488
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.53 E-value=0.014 Score=58.11 Aligned_cols=144 Identities=11% Similarity=0.152 Sum_probs=79.3
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCc-ccccceeecCc
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL-PTLYAEFEASH 162 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~ 162 (489)
+.+.+. .|..|-.-.+|++...+... ....|.+|+...... ..-....|..+++.+..-++ .++++++..+
T Consensus 15 ~~i~i~-~l~gGlTN~~~~v~~~~~~~--~~~~~v~Ri~g~~t~----~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G- 86 (330)
T PLN02421 15 SDFSVE-RISGGITNLLLKVSVKEENG--NEVSVTVRLFGPNTD----YVIDRERELQAIKYLSAAGFGAKLLGVFGNG- 86 (330)
T ss_pred CceEEE-EeCCcccceEEEEEecCCCC--CCceEEEEEecCCcC----eEechHHHHHHHHHHHhcCCCCceeEEeCCc-
Confidence 344544 45457778899987654211 123678888754321 11223448888888764444 4566655432
Q ss_pred eEEEEEeecCCCchHH--------------HHHhCCCCC------C-ChhhHHHHHHHH---------------------
Q 011302 163 YSCLVMEYCPGGDLYA--------------ARQRQPGKR------F-GISSAKFYAAET--------------------- 200 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~--------------~l~~~~~~~------l-~~~~~~~i~~qi--------------------- 200 (489)
+|.+|++|..|.. .+++-.... + -+..+..+..++
T Consensus 87 ---~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (330)
T PLN02421 87 ---MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEE 163 (330)
T ss_pred ---EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHH
Confidence 5899998766521 111110011 1 122222222221
Q ss_pred -HHHHHH---HH-hCC----CeeecCCCCCeEecc-CCcEEEcccCCC
Q 011302 201 -LLALEY---LH-MMG----IVYRDLKPENVLVRE-DGHIMLSDFDLS 238 (489)
Q Consensus 201 -~~~L~y---LH-~~~----iiHrDIKp~NILl~~-~~~vkl~DFG~a 238 (489)
..-+.. +. ..+ ++|.|+-+.|||+++ ++.++++||..|
T Consensus 164 l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYa 211 (330)
T PLN02421 164 LRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYG 211 (330)
T ss_pred HHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEccccc
Confidence 111222 22 222 799999999999975 578999999987
No 489
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.28 E-value=0.0073 Score=55.96 Aligned_cols=29 Identities=34% Similarity=0.615 Sum_probs=21.0
Q ss_pred CCeeecCCCCCeEe-ccCCcEEEcccCCCc
Q 011302 211 GIVYRDLKPENVLV-REDGHIMLSDFDLSF 239 (489)
Q Consensus 211 ~iiHrDIKp~NILl-~~~~~vkl~DFG~a~ 239 (489)
.++|.||.+.|||+ +.++.++|+||..|.
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 48999999999999 889999999999873
No 490
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.03 E-value=0.029 Score=56.62 Aligned_cols=79 Identities=20% Similarity=0.316 Sum_probs=50.1
Q ss_pred eeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHH---HHHHHHHHHHHHHHHhCC--CC-CcccccceeecC
Q 011302 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAI---RKKLHRADMEKVILTMLD--HP-FLPTLYAEFEAS 161 (489)
Q Consensus 88 ~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~E~~~l~~l~--hp-nIv~l~~~~~~~ 161 (489)
.++.||.|.-.-||++.+.. .++.+.||.-..-.... .-...+...|..+|+.+. .| +++++|. .+.
T Consensus 33 ~~~eigdGnlN~VfrV~~~~-----~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~ 105 (409)
T PRK12396 33 QCKEIGDGNLNYVFRVWDEQ-----KNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDS 105 (409)
T ss_pred eeeEcCCCceEEEEEEeeCC-----CCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECc
Confidence 37789999999999998742 12456777643221110 112455566888887764 34 4556653 455
Q ss_pred ceEEEEEeecCC
Q 011302 162 HYSCLVMEYCPG 173 (489)
Q Consensus 162 ~~~~lV~E~~~g 173 (489)
+...+|||+++.
T Consensus 106 e~~~~vMEdL~~ 117 (409)
T PRK12396 106 VMNCCVMEDLSD 117 (409)
T ss_pred HHhhHHHHhCcc
Confidence 666799999865
No 491
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.81 E-value=0.083 Score=52.06 Aligned_cols=29 Identities=17% Similarity=0.127 Sum_probs=26.9
Q ss_pred CCeeecCCCCCeEeccCCcEEEcccCCCc
Q 011302 211 GIVYRDLKPENVLVREDGHIMLSDFDLSF 239 (489)
Q Consensus 211 ~iiHrDIKp~NILl~~~~~vkl~DFG~a~ 239 (489)
++||+|+.+.|+|++.++.+.|+||..+.
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKAS 225 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence 69999999999999999999999999873
No 492
>PTZ00384 choline kinase; Provisional
Probab=95.70 E-value=0.036 Score=56.26 Aligned_cols=84 Identities=15% Similarity=0.292 Sum_probs=47.1
Q ss_pred CCceeeeeeccCCceeEEEEEEccCCC-CCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCC-CcccccceeecC
Q 011302 84 DHFRLLRRLGSGDIGNVYLCQIRNPMV-GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHP-FLPTLYAEFEAS 161 (489)
Q Consensus 84 ~~y~~~~~lG~G~fg~Vy~a~~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp-nIv~l~~~~~~~ 161 (489)
++.. ++.|..|-...+|++...+... ....+.|.+.+.... ....-...+|..+++.+... .-.++++.+..
T Consensus 51 ~~i~-i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~----~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~- 124 (383)
T PTZ00384 51 EFIE-IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTY----NSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD- 124 (383)
T ss_pred ccEE-EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCC----CceEeccHHHHHHHHHHHhCCCCCeEEEecCC-
Confidence 3444 4466668889999997543210 011122333332111 11111224488888888644 44566776653
Q ss_pred ceEEEEEeecCCCch
Q 011302 162 HYSCLVMEYCPGGDL 176 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L 176 (489)
++|.||++|-.|
T Consensus 125 ---g~l~efIeGr~l 136 (383)
T PTZ00384 125 ---FTIQEWVEGNTM 136 (383)
T ss_pred ---EEEEEEeccccC
Confidence 599999998776
No 493
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=95.15 E-value=0.14 Score=50.26 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=27.8
Q ss_pred CCeeecCCCCCeEeccCCcEEEcccCCCccc
Q 011302 211 GIVYRDLKPENVLVREDGHIMLSDFDLSFKC 241 (489)
Q Consensus 211 ~iiHrDIKp~NILl~~~~~vkl~DFG~a~~~ 241 (489)
.++|+|+.+.||+++.++-+-++||+++..-
T Consensus 199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred eeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 3899999999999999988999999998543
No 494
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=94.95 E-value=0.045 Score=53.20 Aligned_cols=76 Identities=21% Similarity=0.192 Sum_probs=45.6
Q ss_pred ceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCC---CCCcccccceeecCc
Q 011302 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD---HPFLPTLYAEFEASH 162 (489)
Q Consensus 86 y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~ 162 (489)
.+-.+.|+.|....+|+... .++.|.+|+-.... ...+..|..-|+.|. --.|++.+++....+
T Consensus 19 i~~~~~v~GG~i~~a~~~~~-------~~~~~FvK~~~~~~------~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~ 85 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLDT-------DGGSYFVKVNSESG------RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD 85 (288)
T ss_dssp --EEEEE--SSSSEEEEEET-------TS-EEEEEEEEGGG------CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS
T ss_pred eeeeEecCCCChhheEEEEC-------CCccEEEEecChhh------HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC
Confidence 44567789999999999872 35678899876321 233455777777773 345778888887777
Q ss_pred eEEEEEeecCCC
Q 011302 163 YSCLVMEYCPGG 174 (489)
Q Consensus 163 ~~~lV~E~~~gg 174 (489)
.-||||||++.+
T Consensus 86 ~~fLlle~l~~~ 97 (288)
T PF03881_consen 86 DAFLLLEFLEMG 97 (288)
T ss_dssp CCEEEEE-----
T ss_pred CceEEEEeecCC
Confidence 779999999776
No 495
>PRK06148 hypothetical protein; Provisional
Probab=94.88 E-value=0.33 Score=55.79 Aligned_cols=30 Identities=30% Similarity=0.409 Sum_probs=25.6
Q ss_pred CCCeeecCCCCCeEeccCC--cEE-EcccCCCc
Q 011302 210 MGIVYRDLKPENVLVREDG--HIM-LSDFDLSF 239 (489)
Q Consensus 210 ~~iiHrDIKp~NILl~~~~--~vk-l~DFG~a~ 239 (489)
.++||.|+.+.|||++.++ .+. |+|||.+.
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 4799999999999999775 555 99999864
No 496
>PTZ00296 choline kinase; Provisional
Probab=94.86 E-value=0.26 Score=51.05 Aligned_cols=86 Identities=13% Similarity=0.153 Sum_probs=50.2
Q ss_pred ccCCceeeeeeccCCceeEEEEEEccCCC---CCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhCCCCCc-ccccce
Q 011302 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMV---GLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL-PTLYAE 157 (489)
Q Consensus 82 ~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~ 157 (489)
..++. -++.|..|-.-.+|++...+... ...++.|.+++....... +-....|..+++.+..-+| .++++.
T Consensus 104 ~~~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~----lIdR~~E~~v~~~ls~~gi~P~l~~~ 178 (442)
T PTZ00296 104 TEDDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDE----LYNPISEFEVYKTMSKYRIAPQLLNT 178 (442)
T ss_pred CcccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccc----eeCHHHHHHHHHHHHHCCCCCceEEE
Confidence 34455 56777778888899997653211 112457888887543211 1122347777776654343 355565
Q ss_pred eecCceEEEEEeecCCCch
Q 011302 158 FEASHYSCLVMEYCPGGDL 176 (489)
Q Consensus 158 ~~~~~~~~lV~E~~~gg~L 176 (489)
+.. +.|.||++|-.|
T Consensus 179 f~g----g~I~efi~g~~l 193 (442)
T PTZ00296 179 FSG----GRIEEWLYGDPL 193 (442)
T ss_pred eCC----CEEEEeeCCccC
Confidence 542 468999988744
No 497
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.32 E-value=0.13 Score=47.41 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=55.1
Q ss_pred HHHHHHHHhCCCCCcccccceeecCceEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHh--CCCee
Q 011302 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLHM--MGIVY 214 (489)
Q Consensus 137 ~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH~--~~iiH 214 (489)
..+.+++.+++ .|++|.. .++-.+-+++|+|-.... .. .- ++.-=+.+|.-.|+ .+.+|
T Consensus 106 ~nky~v~Armh--GilrL~N--Dn~~~yGvIlE~Cy~~~i-----------~~---~N-~i~agi~~L~~fH~~~~~~lH 166 (308)
T PF07387_consen 106 FNKYRVFARMH--GILRLKN--DNNYKYGVILERCYKIKI-----------NF---SN-FITAGIKDLMDFHSENQHCLH 166 (308)
T ss_pred hhhhhHHHHhh--heeEeec--CCCceeEEEEeeccCccc-----------ch---hH-HHHHhHHHHHHhhccCCCeec
Confidence 34566666654 5777773 244456789999932211 11 11 11222466777884 47999
Q ss_pred ecCCCCCeEeccCCcEEEcccCC
Q 011302 215 RDLKPENVLVREDGHIMLSDFDL 237 (489)
Q Consensus 215 rDIKp~NILl~~~~~vkl~DFG~ 237 (489)
+|-.|+|||.|..|.+||.|=+.
T Consensus 167 GD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 167 GDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred CCCChhheeecCCCCEEecChhh
Confidence 99999999999999999999875
No 498
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.97 E-value=1.2 Score=41.53 Aligned_cols=79 Identities=25% Similarity=0.295 Sum_probs=50.4
Q ss_pred CceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHHHHHHHHHHHhC---CCCCcccccceeecC
Q 011302 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFEAS 161 (489)
Q Consensus 85 ~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~~~ 161 (489)
+.+..+.+.-|.--+.|...+- ...|-+|+-.++.. ..+..|+.-|..+ +--.|.+.+.+-.+.
T Consensus 17 ~i~er~~v~gG~inea~~v~dg-------~~~~FvK~n~~~~~------~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~ 83 (286)
T COG3001 17 EIKEREEVSGGDINEAWRLRDG-------TDPFFVKCNQREQL------SMFTAEADGLELLARSNTITVPKVIAVGASR 83 (286)
T ss_pred hhhcccccCCccccceeEeecC-------CcceEEEecchhhH------HHHHHHHHHHHHHHhcCCccccceEEecCCC
Confidence 3344445555554555555443 35677887665433 3344466555544 445678888888899
Q ss_pred ceEEEEEeecCCCch
Q 011302 162 HYSCLVMEYCPGGDL 176 (489)
Q Consensus 162 ~~~~lV~E~~~gg~L 176 (489)
.+.||||||++-|.+
T Consensus 84 ~~sylVle~L~~~~~ 98 (286)
T COG3001 84 DHSYLVLEYLPTGPL 98 (286)
T ss_pred CeeEEEEeeccCCCC
Confidence 999999999987655
No 499
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=93.56 E-value=0.018 Score=58.77 Aligned_cols=96 Identities=20% Similarity=0.238 Sum_probs=66.3
Q ss_pred cCCCCCCccHHHHHHHHHHHhhcCccccCCceeeeeeccCCceeEEEEEEccCCCCCCCeeEEEEeeehHHHHHHHHHHH
Q 011302 56 NSHKPHKANQAAWEAMKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHR 135 (489)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~a~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~ 135 (489)
....+..++...+...++.. .....++|..+..+|.|+||+|+.+.... ....||||.+...... ....+
T Consensus 24 ~~e~s~~~~~~~~~~~~~~~---~sr~a~~~e~~~~~~~~g~~~~~~~~n~~-----d~~~~avkritlkn~e--~s~~r 93 (516)
T KOG1033|consen 24 AREDSFPANKSKVRHNKRVI---TSREANDFEPGQCLGRGGFGVVFSAQNKA-----DENKYAVKRITLKNRE--ESRSR 93 (516)
T ss_pred cccccccccccchhhhhhhh---hhhhhccccccccccccCccccCCccccc-----cchhhHHHHhcccchh--hhhhh
Confidence 33444444444444444332 22345789999999999999999998775 4567899988643222 33445
Q ss_pred HHHHHHHHHhCCCCCcccccceeecC
Q 011302 136 ADMEKVILTMLDHPFLPTLYAEFEAS 161 (489)
Q Consensus 136 ~~~E~~~l~~l~hpnIv~l~~~~~~~ 161 (489)
..+|+.-+..+.|++|++++..|...
T Consensus 94 vl~~~~s~a~feh~g~~~~~ha~~~~ 119 (516)
T KOG1033|consen 94 VLREVSSLAEFEHPGIKRYFHAWYER 119 (516)
T ss_pred hhccccchhhhcccchhhheeceecC
Confidence 66788889999999999998877543
No 500
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=93.35 E-value=0.18 Score=50.70 Aligned_cols=62 Identities=26% Similarity=0.160 Sum_probs=45.1
Q ss_pred eEEEEEeecCCCchHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHH-hCCCeeecCCCCCeEeccC
Q 011302 163 YSCLVMEYCPGGDLYAARQRQPGKRFGISSAKFYAAETLLALEYLH-MMGIVYRDLKPENVLVRED 227 (489)
Q Consensus 163 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~yLH-~~~iiHrDIKp~NILl~~~ 227 (489)
...||-+|..|.++..++... ..+++..+.++.-.+.||--|- -.+++|.|+.|.||++..+
T Consensus 319 ~~vl~E~~~~Gl~v~~~v~~~---~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 319 DLVLVETYERGLSVLRFVKWK---SQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN 381 (565)
T ss_pred cceeeeeccccccHHhhhhcc---cChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence 346788899999998887653 3455566666666666654443 5689999999999999744
Done!