BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011304
(489 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DW74|DGDG1_LOTJA Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus
japonicus GN=DGD1 PE=2 SV=1
Length = 786
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/501 (75%), Positives = 426/501 (85%), Gaps = 21/501 (4%)
Query: 1 MNDETQATSSSKAFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSA 60
M + Q SSS AFSF+S+ WREVRDSADAD+QLMK+RANSFKNLATSFDRELENF NSA
Sbjct: 1 MASQRQPPSSSNAFSFLSKGWREVRDSADADLQLMKDRANSFKNLATSFDRELENFFNSA 60
Query: 61 ----------NRSSAPAEIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLS 110
+ S PAEI+FVKKLQPK+SEFRR YS+P+ SK+VLEKW PRARIRIDLS
Sbjct: 61 APAFSVPAMRSASPPPAEIEFVKKLQPKLSEFRRAYSSPDFSKKVLEKWRPRARIRIDLS 120
Query: 111 AIRNAIVSDVDVDAERDGGGIIEFDRGKRGR-VGF-RELWGEREVGEWEPIRTLKMRLRE 168
AI+NAIVS+ ++D GI++F+RGKR R + F EL GE E +WEPIR LK RL+E
Sbjct: 121 AIKNAIVSE-EIDE-----GIVDFERGKRERRLSFWEELKGEGEAQDWEPIRALKTRLKE 174
Query: 169 FERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVRQSGP 228
FE KR SVE F GFK+S+F+EKVKSS K++CKEP +SK+VPPLD ELLA+ V+QSGP
Sbjct: 175 FE-KRSSSVE-FFDGFKNSEFLEKVKSSLKSMCKEPRDSKEVPPLDVAELLAYFVKQSGP 232
Query: 229 FLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQST 288
FLD LGV+RD+CDKIVESL SKRK QLLL S++G E S+L N NINDELDLRIASVLQST
Sbjct: 233 FLDQLGVRRDVCDKIVESLYSKRKNQLLLPSLSGEESSLLGNGNINDELDLRIASVLQST 292
Query: 289 GHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLL 348
GH EGGFWTD K DLSD +R+VAIVTTASLPWMTGTAVNPLFRAAYL+++E+Q VTLL
Sbjct: 293 GHRNEGGFWTDHAKHDLSDNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSEKQKVTLL 352
Query: 349 VPWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSII 407
VPWLCKSDQELVYP N+TF SPEEQE Y+RNWLEER+GFKADFKISFYPGKFS+ RRSII
Sbjct: 353 VPWLCKSDQELVYPSNLTFTSPEEQEGYIRNWLEERIGFKADFKISFYPGKFSQARRSII 412
Query: 408 PAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGA 467
PAGDT+QFIPSKDADIAILEEPEHLNWYHHG RWTDKFNHVVG+VHTNYLEYIKREKNGA
Sbjct: 413 PAGDTAQFIPSKDADIAILEEPEHLNWYHHGTRWTDKFNHVVGIVHTNYLEYIKREKNGA 472
Query: 468 LQAFFVKHINNWVTRAYCDKV 488
LQAF VKHINNWV RAYCDKV
Sbjct: 473 LQAFLVKHINNWVARAYCDKV 493
>sp|Q6DW76|DGDG1_SOYBN Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Glycine max
GN=DGD1 PE=2 SV=1
Length = 783
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/500 (72%), Positives = 411/500 (82%), Gaps = 22/500 (4%)
Query: 1 MNDETQATSSSKAFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSA 60
M Q +SS AFSFIS+ WREVRDSADAD++LM++RANSFK+LATSFDRELENF NSA
Sbjct: 1 MATHPQTPTSSNAFSFISKGWREVRDSADADLRLMRDRANSFKDLATSFDRELENFFNSA 60
Query: 61 N--------RSSAPAEIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAI 112
RS P EI+FVK L+PK+SE RR YS+P+ SK+VLEKW PR +IRI+LSAI
Sbjct: 61 TPPFSVPAMRSPPPKEIEFVKSLRPKLSEIRRAYSSPDFSKKVLEKWRPRTQIRINLSAI 120
Query: 113 RNAIVSDVDVDAERDGGGIIEFDRGKRGRVGFRELWGEREVG---EWEPIRTLKMRLREF 169
+NAIVS AE + GI++F++ +R R+ F E W G +WEPIR LK RL+EF
Sbjct: 121 KNAIVS-----AEEEEEGIVDFEKRRRRRLSFWEEWKGEGEGESRDWEPIRVLKTRLKEF 175
Query: 170 ERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVRQSGPF 229
E++ F FK+S+FVEKVKSS K++CKEP ESK+VPPLD ELLA++V+QSGPF
Sbjct: 176 EKR-----GSSFDAFKNSEFVEKVKSSLKSMCKEPLESKEVPPLDVPELLAYIVKQSGPF 230
Query: 230 LDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTG 289
LDHLGVKRD+CDKIVESL SK K LL S++G E SVL N NINDELDLRIASVLQSTG
Sbjct: 231 LDHLGVKRDICDKIVESLYSKCKNHQLLHSLSGEESSVLGNGNINDELDLRIASVLQSTG 290
Query: 290 HHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLV 349
H YEGGFWTD K D D +R+VAIVTTASLPWMTGTAVNPLFRAAYL+++ +Q VTLLV
Sbjct: 291 HRYEGGFWTDHAKHDPLDNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLV 350
Query: 350 PWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIP 408
PWLCKSDQELVYP N+TF SPEEQE Y+R+WLEER+GFKADFKISFYPGKFS+ RRSIIP
Sbjct: 351 PWLCKSDQELVYPSNLTFTSPEEQEAYIRSWLEERIGFKADFKISFYPGKFSEARRSIIP 410
Query: 409 AGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGAL 468
AGDTSQFIPS+DADIAILEEPEHLNWYHHGKRWTDKFNHVVG+VHTNYLEYIKREKNGAL
Sbjct: 411 AGDTSQFIPSRDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGAL 470
Query: 469 QAFFVKHINNWVTRAYCDKV 488
QAF VKHINNWVTRAYC KV
Sbjct: 471 QAFLVKHINNWVTRAYCHKV 490
>sp|Q9S7D1|DGDG1_ARATH Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis
thaliana GN=DGD1 PE=1 SV=1
Length = 808
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/498 (68%), Positives = 405/498 (81%), Gaps = 29/498 (5%)
Query: 13 AFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANRSSAPA----- 67
A SF+S+ WREV DSADAD+QLM++RANS KNLA++FDRE+ENFLN++ RS+ P
Sbjct: 33 ALSFLSKGWREVWDSADADLQLMRDRANSVKNLASTFDREIENFLNNSARSAFPVGSPSA 92
Query: 68 -----EIDFVKKLQPKISEFRRVYSAPEISKRVLEKWGP-RARIRIDLSAIRNAIVSDVD 121
EI +KKLQPKISEFRRVYSAPEIS++V+E+WGP RA++ +DLSAI+ AIVS+++
Sbjct: 93 SSFSNEIGIMKKLQPKISEFRRVYSAPEISRKVMERWGPARAKLGMDLSAIKKAIVSEME 152
Query: 122 VDAERDGGGIIEFDRGKRGRVG----FRELWGERE------VGEWEPIRTLKMRLREFER 171
+D + G++E R +R R F E + E E G+WEPIR+LK R +EFE+
Sbjct: 153 LDERQ---GVLEMSRLRRRRNSDRVRFTEFFAEAERDGEAYFGDWEPIRSLKSRFKEFEK 209
Query: 172 KRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVRQSGPFLD 231
+ L EI GFK+S+FVEK+K+S+K+I KE +E+KDVPPLD ELLA LVRQS PFLD
Sbjct: 210 RSSL---EILSGFKNSEFVEKLKTSFKSIYKETDEAKDVPPLDVPELLACLVRQSEPFLD 266
Query: 232 HLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHH 291
+GV++D CD+IVESLC K K Q L R + ++ENDN +LD+RIASVLQSTGHH
Sbjct: 267 QIGVRKDTCDRIVESLC-KCKSQQLWRLPSAQASDLIENDNHGVDLDMRIASVLQSTGHH 325
Query: 292 YEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPW 351
Y+GGFWTDF K + + KR+VAIVTTASLPWMTGTAVNPLFRAAYLAK +Q+VTL+VPW
Sbjct: 326 YDGGFWTDFVKPETPENKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKAAKQSVTLVVPW 385
Query: 352 LCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAG 410
LC+SDQELVYPN +TF SPEEQE+Y+R WLEER+GFKADFKISFYPGKFSKERRSI PAG
Sbjct: 386 LCESDQELVYPNNLTFSSPEEQESYIRKWLEERIGFKADFKISFYPGKFSKERRSIFPAG 445
Query: 411 DTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQA 470
DTSQFI SKDADIAILEEPEHLNWY+HGKRWTDKFNHVVG+VHTNYLEYIKREKNGALQA
Sbjct: 446 DTSQFISSKDADIAILEEPEHLNWYYHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQA 505
Query: 471 FFVKHINNWVTRAYCDKV 488
FFV H+NNWVTRAYCDKV
Sbjct: 506 FFVNHVNNWVTRAYCDKV 523
>sp|Q6DW75|DGDG2_SOYBN Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Glycine max
GN=DGD2 PE=2 SV=1
Length = 463
Score = 278 bits (711), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 122/183 (66%), Positives = 148/183 (80%), Gaps = 1/183 (0%)
Query: 307 DKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VT 365
DKK ++AI TTASLPW+TGTAVNPLFRAAYLAK+ +++VTL++PWL DQ LVYPN +T
Sbjct: 2 DKKEHIAIFTTASLPWLTGTAVNPLFRAAYLAKSGERDVTLVIPWLSLKDQRLVYPNNIT 61
Query: 366 FCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAI 425
F SP E E Y+ WLEERVGF + F I FYPGKFS+++RSI+ GD S+ IP K ADIA+
Sbjct: 62 FASPSEHEKYICQWLEERVGFTSGFSIQFYPGKFSRDKRSILAVGDISEIIPDKVADIAV 121
Query: 426 LEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYC 485
LEEPEHL WYHHGKRW KF V+G++HTNYLEY+KREKNG +QAF +K++NNWV YC
Sbjct: 122 LEEPEHLTWYHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGVMQAFLLKYLNNWVVSIYC 181
Query: 486 DKV 488
KV
Sbjct: 182 HKV 184
>sp|Q6DW73|DGDG2_LOTJA Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Lotus
japonicus GN=DGD2 PE=2 SV=1
Length = 463
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 120/182 (65%), Positives = 149/182 (81%), Gaps = 1/182 (0%)
Query: 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTF 366
KK+++AI TTASLPW+TGTAVNPLFRAAYL+K +++VTL++PWL DQ LVYPN +TF
Sbjct: 3 KKQHIAIFTTASLPWLTGTAVNPLFRAAYLSKDGERDVTLVIPWLSLKDQALVYPNNITF 62
Query: 367 CSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAIL 426
SP E E Y+R WLEERVGF + F I FYPGKFS+++RSI+ GD S+ IP K+ADIA+L
Sbjct: 63 ASPSEHEKYIRQWLEERVGFTSGFSIKFYPGKFSRDKRSILAVGDISEVIPDKEADIAVL 122
Query: 427 EEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCD 486
EEPEHL W+HHGKRW KF V+G++HTNYLEY+KREKNG +QAF +K++NNWV YC
Sbjct: 123 EEPEHLTWFHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGQMQAFLLKYLNNWVVGIYCH 182
Query: 487 KV 488
KV
Sbjct: 183 KV 184
>sp|Q8W1S1|DGDG2_ARATH Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis
thaliana GN=DGD2 PE=1 SV=1
Length = 473
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 150/184 (81%), Gaps = 1/184 (0%)
Query: 306 SDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-V 364
+ +++++AI TTAS+PW+TGTAVNPLFRAAYLA ++ VTL++PWL Q+LVYPN +
Sbjct: 3 NQQEQHIAIFTTASIPWLTGTAVNPLFRAAYLANDGERRVTLVIPWLTLKHQKLVYPNSI 62
Query: 365 TFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIA 424
TF SP EQE Y+R WLEERV F+ F+I FYPGKF+ ++RSI+P GD S IP ++ADIA
Sbjct: 63 TFSSPSEQEAYVRQWLEERVSFRLAFEIRFYPGKFAIDKRSILPVGDISDAIPDEEADIA 122
Query: 425 ILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAY 484
+LEEPEHL W+HHG++W KFN+V+G+VHTNYLEY+KREK G ++AFF+K++N+WV Y
Sbjct: 123 VLEEPEHLTWFHHGQKWKTKFNYVIGIVHTNYLEYVKREKQGRVKAFFLKYLNSWVVGIY 182
Query: 485 CDKV 488
C KV
Sbjct: 183 CHKV 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,385,015
Number of Sequences: 539616
Number of extensions: 8341563
Number of successful extensions: 19650
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 19620
Number of HSP's gapped (non-prelim): 16
length of query: 489
length of database: 191,569,459
effective HSP length: 122
effective length of query: 367
effective length of database: 125,736,307
effective search space: 46145224669
effective search space used: 46145224669
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)