Query 011309
Match_columns 489
No_of_seqs 430 out of 2205
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 23:55:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011309.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011309hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 1.1E-34 2.4E-39 257.7 12.9 195 13-260 6-203 (226)
2 KOG4412 26S proteasome regulat 100.0 9.8E-34 2.1E-38 251.7 14.6 176 9-239 37-213 (226)
3 PHA02791 ankyrin-like protein; 100.0 2E-32 4.3E-37 271.5 24.9 193 10-260 30-225 (284)
4 PHA02875 ankyrin repeat protei 100.0 2.5E-31 5.5E-36 278.5 24.3 221 12-257 4-230 (413)
5 PHA02874 ankyrin repeat protei 100.0 9.1E-31 2E-35 276.2 25.3 268 12-314 3-289 (434)
6 PHA02878 ankyrin repeat protei 100.0 6.5E-31 1.4E-35 280.6 24.2 204 11-275 38-309 (477)
7 PHA02874 ankyrin repeat protei 100.0 9.8E-31 2.1E-35 276.0 25.2 225 9-250 34-275 (434)
8 PHA03100 ankyrin repeat protei 100.0 8.2E-31 1.8E-35 279.6 23.1 235 9-272 34-289 (480)
9 PHA02791 ankyrin-like protein; 100.0 6.1E-31 1.3E-35 260.9 20.0 180 10-253 61-243 (284)
10 PHA03095 ankyrin-like protein; 100.0 5E-30 1.1E-34 272.8 24.7 234 10-272 47-296 (471)
11 PHA02946 ankyin-like protein; 100.0 5E-30 1.1E-34 270.8 24.4 219 10-255 37-268 (446)
12 KOG0509 Ankyrin repeat and DHH 100.0 1.7E-30 3.7E-35 269.7 17.7 188 11-252 45-234 (600)
13 PHA03100 ankyrin repeat protei 100.0 9.4E-30 2E-34 271.4 21.7 220 10-254 68-307 (480)
14 PHA03095 ankyrin-like protein; 100.0 1.3E-29 2.9E-34 269.5 22.4 220 9-253 82-313 (471)
15 PHA02859 ankyrin repeat protei 100.0 1.8E-29 3.9E-34 240.6 20.4 174 11-241 22-203 (209)
16 PHA02946 ankyin-like protein; 100.0 1.8E-29 3.8E-34 266.6 21.1 211 10-253 72-293 (446)
17 KOG0509 Ankyrin repeat and DHH 100.0 4.9E-30 1.1E-34 266.3 15.5 176 12-240 80-255 (600)
18 PHA02876 ankyrin repeat protei 100.0 7E-29 1.5E-33 276.0 25.9 115 145-273 366-483 (682)
19 PHA02876 ankyrin repeat protei 100.0 3.8E-29 8.2E-34 278.2 23.0 272 11-310 146-473 (682)
20 PHA02989 ankyrin repeat protei 100.0 7.9E-29 1.7E-33 265.7 22.0 227 10-252 35-311 (494)
21 PHA02716 CPXV016; CPX019; EVM0 100.0 9.4E-29 2E-33 270.6 22.1 218 10-253 177-426 (764)
22 PHA02798 ankyrin-like protein; 100.0 1.6E-28 3.4E-33 263.0 21.6 226 12-252 38-313 (489)
23 PHA02878 ankyrin repeat protei 100.0 2.9E-28 6.2E-33 260.3 21.9 171 25-250 149-321 (477)
24 KOG0508 Ankyrin repeat protein 100.0 2.3E-29 4.9E-34 251.6 12.3 188 10-251 42-236 (615)
25 KOG0510 Ankyrin repeat protein 100.0 1.8E-28 3.8E-33 259.0 18.0 247 13-285 124-392 (929)
26 PHA02716 CPXV016; CPX019; EVM0 100.0 5.4E-28 1.2E-32 264.7 22.1 234 18-282 150-415 (764)
27 KOG0510 Ankyrin repeat protein 100.0 3.2E-28 6.8E-33 257.0 17.0 231 9-251 87-327 (929)
28 PHA02989 ankyrin repeat protei 100.0 1.7E-27 3.7E-32 255.3 22.7 222 20-272 13-295 (494)
29 PHA02798 ankyrin-like protein; 100.0 2.6E-27 5.6E-32 253.7 22.8 226 22-274 17-299 (489)
30 PHA02795 ankyrin-like protein; 100.0 2.2E-27 4.8E-32 244.9 20.0 187 16-253 83-285 (437)
31 PHA02875 ankyrin repeat protei 100.0 3.8E-27 8.1E-32 246.9 21.4 208 9-240 34-248 (413)
32 PHA02917 ankyrin-like protein; 99.9 1.2E-26 2.7E-31 254.6 22.5 220 23-257 12-258 (661)
33 KOG0508 Ankyrin repeat protein 99.9 4E-27 8.7E-32 235.6 12.2 208 14-272 8-221 (615)
34 PLN03192 Voltage-dependent pot 99.9 8.5E-26 1.8E-30 255.6 22.1 177 10-243 525-702 (823)
35 PHA02859 ankyrin repeat protei 99.9 4.6E-25 9.9E-30 210.3 20.5 170 45-274 21-200 (209)
36 KOG4177 Ankyrin [Cell wall/mem 99.9 1E-26 2.2E-31 259.2 9.3 231 10-255 374-631 (1143)
37 KOG4177 Ankyrin [Cell wall/mem 99.9 3.2E-26 6.8E-31 255.3 11.3 253 8-283 339-619 (1143)
38 PHA02917 ankyrin-like protein; 99.9 5.7E-24 1.2E-28 233.6 21.7 189 58-272 12-235 (661)
39 PHA02730 ankyrin-like protein; 99.9 8.2E-24 1.8E-28 228.0 21.1 238 10-272 155-502 (672)
40 PLN03192 Voltage-dependent pot 99.9 1.5E-23 3.1E-28 237.5 23.5 159 45-258 525-684 (823)
41 PHA02792 ankyrin-like protein; 99.9 1E-23 2.3E-28 225.0 20.4 250 12-275 73-452 (631)
42 PHA02730 ankyrin-like protein; 99.9 6.9E-24 1.5E-28 228.6 19.1 195 11-251 42-258 (672)
43 PHA02795 ankyrin-like protein; 99.9 6.7E-24 1.4E-28 219.1 17.4 168 10-228 116-293 (437)
44 KOG0502 Integral membrane anky 99.9 1.7E-24 3.6E-29 198.2 7.0 190 13-258 65-255 (296)
45 KOG0505 Myosin phosphatase, re 99.9 1.3E-23 2.8E-28 214.4 12.8 205 13-239 43-273 (527)
46 TIGR00870 trp transient-recept 99.9 4.8E-23 1E-27 231.4 17.8 197 9-241 16-219 (743)
47 KOG0514 Ankyrin repeat protein 99.9 1.1E-23 2.4E-28 205.4 10.8 158 42-253 265-430 (452)
48 KOG0502 Integral membrane anky 99.9 1.5E-23 3.3E-28 191.9 9.4 189 12-257 98-286 (296)
49 PHA02792 ankyrin-like protein; 99.9 3.7E-22 8E-27 213.3 17.7 207 10-239 105-452 (631)
50 PHA02743 Viral ankyrin protein 99.9 7.7E-22 1.7E-26 181.3 14.2 133 46-231 21-162 (166)
51 KOG0507 CASK-interacting adapt 99.9 2E-22 4.4E-27 212.0 10.5 208 11-241 50-265 (854)
52 TIGR00870 trp transient-recept 99.9 2.3E-21 5E-26 217.8 15.8 203 10-251 52-278 (743)
53 KOG0507 CASK-interacting adapt 99.9 1.7E-21 3.6E-26 205.1 11.8 211 10-270 3-258 (854)
54 PHA02741 hypothetical protein; 99.9 8.9E-21 1.9E-25 174.7 14.6 131 87-254 20-156 (169)
55 PHA02741 hypothetical protein; 99.8 2.1E-20 4.5E-25 172.3 14.2 126 45-223 21-158 (169)
56 PHA02743 Viral ankyrin protein 99.8 3.9E-20 8.5E-25 170.0 14.7 133 10-186 20-160 (166)
57 PHA02884 ankyrin repeat protei 99.8 5.2E-20 1.1E-24 183.2 16.5 151 46-253 34-185 (300)
58 KOG0514 Ankyrin repeat protein 99.8 7.8E-21 1.7E-25 185.5 9.7 158 71-286 261-423 (452)
59 PHA02884 ankyrin repeat protei 99.8 6.9E-20 1.5E-24 182.3 16.5 151 11-221 34-186 (300)
60 KOG0505 Myosin phosphatase, re 99.8 1.7E-20 3.7E-25 191.8 11.3 171 48-261 43-263 (527)
61 PHA02736 Viral ankyrin protein 99.8 4.4E-20 9.6E-25 167.2 10.8 126 44-224 16-153 (154)
62 PHA02736 Viral ankyrin protein 99.8 8.4E-20 1.8E-24 165.4 10.6 129 87-253 16-149 (154)
63 KOG0512 Fetal globin-inducing 99.8 1.3E-18 2.8E-23 154.4 12.3 87 147-243 90-176 (228)
64 KOG4369 RTK signaling protein 99.8 1.7E-19 3.6E-24 194.6 6.6 284 11-317 758-1064(2131)
65 KOG0512 Fetal globin-inducing 99.8 2E-18 4.4E-23 153.1 11.7 90 158-257 67-158 (228)
66 KOG0195 Integrin-linked kinase 99.8 1.4E-18 3.1E-23 165.0 8.1 135 53-240 8-143 (448)
67 KOG3676 Ca2+-permeable cation 99.7 7.9E-18 1.7E-22 179.7 13.9 212 12-252 103-330 (782)
68 KOG4369 RTK signaling protein 99.7 3.9E-18 8.4E-23 184.2 6.8 238 11-273 825-1067(2131)
69 PF12796 Ank_2: Ankyrin repeat 99.7 8.1E-17 1.8E-21 131.8 11.1 89 92-227 1-89 (89)
70 KOG0195 Integrin-linked kinase 99.7 1.5E-17 3.2E-22 158.2 7.5 154 14-225 4-161 (448)
71 cd00204 ANK ankyrin repeats; 99.7 7.6E-16 1.7E-20 131.6 15.5 121 87-250 6-126 (126)
72 PF12796 Ank_2: Ankyrin repeat 99.7 2.3E-16 4.9E-21 129.1 11.1 84 14-113 1-84 (89)
73 cd00204 ANK ankyrin repeats; 99.7 1.5E-15 3.2E-20 129.9 14.9 120 45-217 7-126 (126)
74 KOG3676 Ca2+-permeable cation 99.7 1.2E-15 2.7E-20 163.1 15.0 166 10-219 143-330 (782)
75 COG0666 Arp FOG: Ankyrin repea 99.6 1.4E-14 3E-19 136.5 14.2 126 45-220 73-203 (235)
76 KOG4214 Myotrophin and similar 99.6 3.7E-15 8E-20 119.3 8.0 90 12-114 4-93 (117)
77 COG0666 Arp FOG: Ankyrin repea 99.6 1.6E-13 3.5E-18 129.2 17.5 124 87-253 72-203 (235)
78 KOG4214 Myotrophin and similar 99.5 3.2E-14 7E-19 113.9 8.5 95 48-186 5-99 (117)
79 KOG1710 MYND Zn-finger and ank 99.5 1.6E-13 3.4E-18 130.9 11.2 125 88-254 12-136 (396)
80 PF13857 Ank_5: Ankyrin repeat 99.4 8.4E-14 1.8E-18 104.1 4.5 55 173-237 1-56 (56)
81 PTZ00322 6-phosphofructo-2-kin 99.4 7.5E-13 1.6E-17 146.6 13.0 106 90-238 84-196 (664)
82 PF13637 Ank_4: Ankyrin repeat 99.4 4.4E-13 9.6E-18 99.3 6.6 54 45-108 1-54 (54)
83 PTZ00322 6-phosphofructo-2-kin 99.4 1.7E-12 3.6E-17 143.8 12.0 97 47-186 84-187 (664)
84 PF13637 Ank_4: Ankyrin repeat 99.4 1.5E-12 3.3E-17 96.4 6.1 54 197-250 1-54 (54)
85 KOG1710 MYND Zn-finger and ank 99.3 7.3E-12 1.6E-16 119.6 11.5 124 9-176 11-134 (396)
86 KOG0515 p53-interacting protei 99.3 1.1E-11 2.5E-16 126.5 9.5 94 147-250 576-672 (752)
87 PF13857 Ank_5: Ankyrin repeat 99.3 4.6E-12 1E-16 94.6 5.0 55 29-95 1-56 (56)
88 KOG0515 p53-interacting protei 99.3 1.2E-11 2.6E-16 126.3 9.5 91 14-116 554-644 (752)
89 KOG0783 Uncharacterized conser 99.0 2.3E-10 4.9E-15 122.3 3.9 93 144-245 42-134 (1267)
90 KOG0818 GTPase-activating prot 99.0 1.7E-09 3.7E-14 110.0 8.9 91 147-246 120-216 (669)
91 KOG0506 Glutaminase (contains 98.8 4.7E-09 1E-13 106.5 4.9 86 13-110 509-595 (622)
92 KOG0506 Glutaminase (contains 98.7 1E-08 2.3E-13 104.0 4.5 96 150-255 502-598 (622)
93 KOG0782 Predicted diacylglycer 98.7 8E-08 1.7E-12 99.3 10.3 121 11-176 867-989 (1004)
94 PF13606 Ank_3: Ankyrin repeat 98.7 2.1E-08 4.6E-13 64.7 3.9 29 45-73 2-30 (30)
95 KOG0818 GTPase-activating prot 98.7 7.3E-08 1.6E-12 98.4 9.6 87 12-109 135-221 (669)
96 PF13606 Ank_3: Ankyrin repeat 98.7 3E-08 6.5E-13 64.0 4.0 29 197-225 2-30 (30)
97 KOG0783 Uncharacterized conser 98.7 1.6E-08 3.6E-13 108.4 4.4 101 19-163 26-128 (1267)
98 PF00023 Ank: Ankyrin repeat H 98.6 4.4E-08 9.5E-13 64.7 4.5 32 45-76 2-33 (33)
99 PF00023 Ank: Ankyrin repeat H 98.6 4.7E-08 1E-12 64.5 4.4 32 197-228 2-33 (33)
100 KOG0705 GTPase-activating prot 98.6 1E-07 2.2E-12 99.0 8.8 95 11-115 625-721 (749)
101 KOG0782 Predicted diacylglycer 98.6 1.7E-07 3.7E-12 96.9 9.5 120 49-219 870-989 (1004)
102 KOG3609 Receptor-activated Ca2 98.6 2.1E-07 4.6E-12 101.1 9.8 85 9-110 24-110 (822)
103 KOG0522 Ankyrin repeat protein 98.5 1.5E-07 3.3E-12 97.2 7.1 81 156-246 22-104 (560)
104 KOG0705 GTPase-activating prot 98.4 7.2E-07 1.6E-11 92.8 8.5 92 156-255 626-719 (749)
105 KOG0522 Ankyrin repeat protein 98.4 7.3E-07 1.6E-11 92.3 7.8 86 13-110 23-110 (560)
106 KOG0521 Putative GTPase activa 98.4 1.9E-07 4.1E-12 104.0 3.8 89 152-250 654-742 (785)
107 PF13920 zf-C3HC4_3: Zinc fing 98.2 6.9E-07 1.5E-11 64.9 1.7 47 293-351 2-49 (50)
108 KOG0511 Ankyrin repeat protein 98.1 9.4E-06 2E-10 80.9 8.7 74 12-98 38-111 (516)
109 KOG3609 Receptor-activated Ca2 97.9 2.3E-05 5.1E-10 85.6 8.3 122 87-254 24-155 (822)
110 KOG2384 Major histocompatibili 97.9 2.6E-05 5.6E-10 71.2 6.4 66 177-252 2-68 (223)
111 KOG0520 Uncharacterized conser 97.9 2.6E-05 5.6E-10 87.0 7.0 128 45-219 574-702 (975)
112 KOG2384 Major histocompatibili 97.8 4.9E-05 1.1E-09 69.4 6.4 67 146-222 4-71 (223)
113 KOG0511 Ankyrin repeat protein 97.7 0.0001 2.2E-09 73.7 7.4 66 156-231 38-103 (516)
114 KOG0521 Putative GTPase activa 97.7 3.9E-05 8.3E-10 85.9 4.6 85 12-108 658-742 (785)
115 KOG0520 Uncharacterized conser 97.6 5.7E-05 1.2E-09 84.3 5.2 123 87-252 573-702 (975)
116 KOG4265 Predicted E3 ubiquitin 97.5 3.4E-05 7.4E-10 76.9 1.3 54 291-356 288-342 (349)
117 KOG0317 Predicted E3 ubiquitin 97.5 6.8E-05 1.5E-09 72.7 2.9 49 289-349 235-283 (293)
118 PLN03208 E3 ubiquitin-protein 97.2 0.0004 8.7E-09 64.3 4.1 63 290-352 15-81 (193)
119 PHA02929 N1R/p28-like protein; 97.1 0.00033 7E-09 67.5 2.9 52 292-355 173-232 (238)
120 KOG4172 Predicted E3 ubiquitin 97.0 8.4E-05 1.8E-09 53.5 -1.2 50 294-354 8-58 (62)
121 KOG2505 Ankyrin repeat protein 97.0 0.00065 1.4E-08 70.3 4.5 69 166-238 403-471 (591)
122 KOG1785 Tyrosine kinase negati 97.0 0.00039 8.5E-09 69.8 2.6 54 290-353 366-419 (563)
123 PHA02926 zinc finger-like prot 96.8 0.00083 1.8E-08 63.0 2.8 56 290-351 167-231 (242)
124 PF13639 zf-RING_2: Ring finge 96.8 0.00052 1.1E-08 48.2 0.9 41 294-346 1-44 (44)
125 smart00248 ANK ankyrin repeats 96.8 0.0022 4.8E-08 38.7 3.8 28 45-72 2-29 (30)
126 smart00248 ANK ankyrin repeats 96.7 0.0028 6E-08 38.3 4.1 28 197-224 2-29 (30)
127 KOG0823 Predicted E3 ubiquitin 96.5 0.00092 2E-08 63.1 1.3 58 290-356 44-101 (230)
128 PF14634 zf-RING_5: zinc-RING 96.5 0.0019 4.1E-08 45.4 2.4 40 296-347 2-44 (44)
129 cd00162 RING RING-finger (Real 96.4 0.0027 5.7E-08 43.9 2.5 43 296-349 2-45 (45)
130 PF00097 zf-C3HC4: Zinc finger 96.3 0.0021 4.7E-08 44.2 1.9 40 296-345 1-41 (41)
131 COG5574 PEX10 RING-finger-cont 96.2 0.0022 4.8E-08 61.6 1.7 47 292-349 214-261 (271)
132 PF06128 Shigella_OspC: Shigel 96.0 0.05 1.1E-06 51.5 9.4 123 47-223 155-280 (284)
133 KOG2505 Ankyrin repeat protein 96.0 0.013 2.8E-07 61.0 6.0 73 23-108 404-480 (591)
134 PF13923 zf-C3HC4_2: Zinc fing 95.9 0.004 8.6E-08 42.5 1.6 29 296-324 1-30 (39)
135 PF15227 zf-C3HC4_4: zinc fing 95.9 0.005 1.1E-07 42.9 1.9 42 296-345 1-42 (42)
136 KOG1571 Predicted E3 ubiquitin 95.9 0.0017 3.7E-08 65.1 -0.7 51 290-355 302-352 (355)
137 KOG4275 Predicted E3 ubiquitin 95.9 0.0026 5.7E-08 61.7 0.6 48 293-355 300-347 (350)
138 KOG2164 Predicted E3 ubiquitin 95.7 0.0047 1E-07 64.6 1.8 52 293-351 186-237 (513)
139 KOG0320 Predicted E3 ubiquitin 95.4 0.013 2.7E-07 53.2 3.0 50 290-351 128-179 (187)
140 COG5236 Uncharacterized conser 95.1 0.014 3.1E-07 57.9 2.5 55 290-354 58-112 (493)
141 TIGR00599 rad18 DNA repair pro 94.9 0.016 3.4E-07 60.1 2.7 49 291-351 24-72 (397)
142 PF03158 DUF249: Multigene fam 94.9 0.3 6.5E-06 45.0 10.4 141 46-251 47-191 (192)
143 smart00184 RING Ring finger. E 94.9 0.02 4.3E-07 37.9 2.2 29 296-324 1-29 (39)
144 PF03158 DUF249: Multigene fam 94.7 0.53 1.2E-05 43.4 11.4 139 13-218 49-191 (192)
145 PF12678 zf-rbx1: RING-H2 zinc 94.5 0.022 4.7E-07 44.8 1.9 43 292-346 18-73 (73)
146 KOG1100 Predicted E3 ubiquitin 94.2 0.017 3.7E-07 54.8 0.7 45 296-355 161-205 (207)
147 TIGR00570 cdk7 CDK-activating 93.2 0.066 1.4E-06 53.4 2.9 48 293-351 3-55 (309)
148 KOG2177 Predicted E3 ubiquitin 92.9 0.069 1.5E-06 52.8 2.6 46 290-347 10-55 (386)
149 PF13445 zf-RING_UBOX: RING-ty 92.8 0.056 1.2E-06 37.8 1.3 31 296-327 1-35 (43)
150 COG5432 RAD18 RING-finger-cont 92.7 0.077 1.7E-06 51.6 2.5 54 291-357 23-76 (391)
151 PF06128 Shigella_OspC: Shigel 90.9 0.95 2.1E-05 43.1 7.6 92 12-113 181-279 (284)
152 PF07800 DUF1644: Protein of u 90.5 0.27 5.8E-06 44.0 3.4 36 339-374 80-117 (162)
153 KOG0824 Predicted E3 ubiquitin 90.4 0.16 3.5E-06 49.9 2.1 58 290-358 4-61 (324)
154 smart00504 Ubox Modified RING 90.0 0.13 2.8E-06 38.6 0.9 45 295-351 3-47 (63)
155 KOG0287 Postreplication repair 89.6 0.24 5.2E-06 49.4 2.5 47 291-349 21-67 (442)
156 PF11929 DUF3447: Domain of un 88.4 1.4 3.1E-05 34.6 5.8 50 9-67 5-54 (76)
157 PF11929 DUF3447: Domain of un 88.1 0.89 1.9E-05 35.8 4.5 49 46-111 7-55 (76)
158 KOG1039 Predicted E3 ubiquitin 87.6 0.39 8.4E-06 49.0 2.6 55 291-350 159-221 (344)
159 KOG4628 Predicted E3 ubiquitin 87.1 0.26 5.6E-06 50.1 1.0 47 294-351 230-279 (348)
160 KOG4159 Predicted E3 ubiquitin 86.4 0.42 9.2E-06 49.7 2.2 51 292-354 83-133 (398)
161 COG5243 HRD1 HRD ubiquitin lig 83.2 0.63 1.4E-05 47.1 1.6 50 290-351 284-346 (491)
162 KOG0802 E3 ubiquitin ligase [P 82.6 0.59 1.3E-05 51.1 1.3 44 292-347 290-338 (543)
163 COG5540 RING-finger-containing 81.5 0.82 1.8E-05 45.1 1.7 46 293-349 323-371 (374)
164 KOG0311 Predicted E3 ubiquitin 81.3 0.75 1.6E-05 46.3 1.4 57 290-357 40-97 (381)
165 COG5219 Uncharacterized conser 80.1 1.3 2.9E-05 49.9 2.9 51 290-350 1466-1523(1525)
166 KOG4692 Predicted E3 ubiquitin 79.7 1 2.2E-05 45.3 1.6 49 291-351 420-468 (489)
167 KOG4185 Predicted E3 ubiquitin 79.5 0.77 1.7E-05 46.0 0.8 51 307-372 23-73 (296)
168 COG5152 Uncharacterized conser 76.0 1.2 2.6E-05 41.2 0.9 51 293-355 196-246 (259)
169 PF14835 zf-RING_6: zf-RING of 75.6 1.4 2.9E-05 33.5 1.0 40 295-348 9-49 (65)
170 KOG0825 PHD Zn-finger protein 74.6 1.7 3.7E-05 48.1 1.7 56 291-358 121-179 (1134)
171 PF12861 zf-Apc11: Anaphase-pr 71.4 3.9 8.4E-05 33.0 2.7 37 304-349 45-81 (85)
172 KOG1813 Predicted E3 ubiquitin 70.4 1.9 4E-05 42.6 0.8 51 294-356 242-292 (313)
173 PF14447 Prok-RING_4: Prokaryo 69.3 1.7 3.8E-05 31.8 0.3 45 292-350 6-50 (55)
174 KOG0978 E3 ubiquitin ligase in 66.9 2.5 5.3E-05 46.9 0.9 49 290-349 640-688 (698)
175 KOG0804 Cytoplasmic Zn-finger 63.7 3.4 7.4E-05 43.0 1.2 44 290-347 172-219 (493)
176 KOG2879 Predicted E3 ubiquitin 62.7 5.5 0.00012 39.0 2.4 54 290-353 236-290 (298)
177 KOG3614 Ca2+/Mg2+-permeable ca 56.4 34 0.00073 40.7 7.6 36 197-232 656-698 (1381)
178 KOG1001 Helicase-like transcri 55.1 5.4 0.00012 44.7 1.0 53 294-357 455-507 (674)
179 PF03002 Somatostatin: Somatos 51.9 7.1 0.00015 21.7 0.6 14 462-475 2-15 (18)
180 KOG4739 Uncharacterized protei 51.5 8.1 0.00018 37.2 1.5 48 295-357 5-54 (233)
181 PF04564 U-box: U-box domain; 50.8 4.8 0.0001 31.4 -0.2 57 293-360 4-60 (73)
182 KOG2231 Predicted E3 ubiquitin 50.1 9.4 0.0002 42.3 1.9 52 295-352 2-54 (669)
183 COG5175 MOT2 Transcriptional r 43.2 11 0.00023 38.0 0.9 61 289-360 10-78 (480)
184 KOG3002 Zn finger protein [Gen 42.2 15 0.00033 36.9 1.8 50 289-353 44-94 (299)
185 PF04053 Coatomer_WDAD: Coatom 40.8 50 0.0011 35.2 5.6 107 10-177 321-429 (443)
186 PF14570 zf-RING_4: RING/Ubox 39.0 27 0.00059 25.0 2.2 32 306-348 15-46 (48)
187 KOG0825 PHD Zn-finger protein 38.4 13 0.00028 41.6 0.7 63 292-360 98-165 (1134)
188 KOG1002 Nucleotide excision re 36.7 15 0.00033 39.1 0.9 53 290-349 533-585 (791)
189 KOG1812 Predicted E3 ubiquitin 35.7 32 0.00069 36.0 3.1 50 273-324 128-181 (384)
190 KOG2932 E3 ubiquitin ligase in 35.5 14 0.0003 36.8 0.4 34 307-354 105-138 (389)
191 TIGR02652 conserved hypothetic 35.5 15 0.00033 32.2 0.6 16 338-353 8-23 (163)
192 PF14369 zf-RING_3: zinc-finge 35.5 19 0.00041 23.9 0.9 10 340-349 22-31 (35)
193 PF09654 DUF2396: Protein of u 32.1 19 0.00041 31.6 0.6 16 338-353 5-20 (161)
194 KOG0297 TNF receptor-associate 31.7 24 0.00052 37.0 1.4 53 292-356 20-73 (391)
195 PLN03081 pentatricopeptide (PP 31.0 4.8E+02 0.01 29.3 11.8 55 14-72 165-223 (697)
196 KOG1428 Inhibitor of type V ad 27.3 26 0.00056 42.1 0.8 61 290-353 3483-3547(3738)
197 KOG3799 Rab3 effector RIM1 and 26.4 39 0.00084 29.5 1.5 58 291-352 63-120 (169)
198 PLN03218 maturation of RBCL 1; 26.0 3.3E+02 0.0072 32.6 9.6 56 158-225 726-789 (1060)
199 KOG1709 Guanidinoacetate methy 25.3 1.2E+02 0.0027 29.1 4.7 42 64-115 1-42 (271)
200 KOG0298 DEAD box-containing he 24.7 35 0.00076 40.5 1.2 55 291-357 1151-1207(1394)
201 KOG1595 CCCH-type Zn-finger pr 24.4 14 0.00031 39.5 -1.8 77 153-241 57-140 (528)
202 KOG1814 Predicted E3 ubiquitin 24.0 33 0.00071 35.7 0.7 32 292-323 183-217 (445)
203 TIGR02605 CxxC_CxxC_SSSS putat 22.2 61 0.0013 23.0 1.7 25 338-362 25-50 (52)
204 PLN03077 Protein ECB2; Provisi 21.8 6.8E+02 0.015 28.9 11.1 58 13-74 228-289 (857)
205 COG1996 RPC10 DNA-directed RNA 20.8 37 0.00081 24.4 0.3 13 337-349 22-34 (49)
206 PF10571 UPF0547: Uncharacteri 20.7 67 0.0014 19.8 1.4 8 342-349 3-10 (26)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-34 Score=257.74 Aligned_cols=195 Identities=30% Similarity=0.384 Sum_probs=171.0
Q ss_pred HHHHHHHcCCHHHHHHHhhcCC-CCcccCCCCCCchHHHHHHHhCcHHHHHHHH-HcCCCCCCcCCCCCcccccCCCCCh
Q 011309 13 RLVSAARDGDFVEAKMLLDCNP-CLAKYSTFGGLNSPLHFAAAKGHNEIVALLL-ENGADVNSRNYCGQVTRADYLSGRT 90 (489)
Q Consensus 13 ~L~~Aa~~G~~~~Vk~LL~~g~-~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LL-e~Gad~n~~d~~g~i~~~d~~~G~T 90 (489)
+.+.++......-|+.|++..+ .++.+++.+ |+||||||+..|+.+||.+|+ +.+..+|.+|. .|||
T Consensus 6 ~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD-~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDd----------aGWt 74 (226)
T KOG4412|consen 6 LGKAICENCEEFKVEELIQSDPKSLNARDDQD-GRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDD----------AGWT 74 (226)
T ss_pred hHHHHHhhchHHHHHHHHhcChhhhhcccccc-CCceeeeeeecCchhHHHHHHhcCCCCCCCccc----------cCCc
Confidence 4778888888889999999888 566665533 499999999999999999999 55888999887 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHH
Q 011309 91 ALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCV 170 (489)
Q Consensus 91 pLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v 170 (489)
|||+|+..|+.++|+.|+... +..+|..++.|.|+||||+..|+.+++
T Consensus 75 Plhia~s~g~~evVk~Ll~r~--------------------------------~advna~tn~G~T~LHyAagK~r~eIa 122 (226)
T KOG4412|consen 75 PLHIAASNGNDEVVKELLNRS--------------------------------GADVNATTNGGQTCLHYAAGKGRLEIA 122 (226)
T ss_pred hhhhhhhcCcHHHHHHHhcCC--------------------------------CCCcceecCCCcceehhhhcCChhhHH
Confidence 999999999999999999651 123889999999999999999999999
Q ss_pred HHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHh-
Q 011309 171 QLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLL- 249 (489)
Q Consensus 171 ~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL- 249 (489)
++|+++|+.++.+|.. |.||||.|+.-|+++++++|+..|+.+|.+|+.|+||||.|.-.|+.++..+|
T Consensus 123 qlLle~ga~i~~kD~~----------~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV 192 (226)
T KOG4412|consen 123 QLLLEKGALIRIKDKQ----------GQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLV 192 (226)
T ss_pred HHHHhcCCCCcccccc----------cCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHH
Confidence 9999999999999987 99999999999999999999999999999999999999999888999876666
Q ss_pred cCCCCCCCCCC
Q 011309 250 APSSDAVMPRF 260 (489)
Q Consensus 250 ~~~~~~~~~~~ 260 (489)
..+++.++.+.
T Consensus 193 ~~gAd~~~edk 203 (226)
T KOG4412|consen 193 RAGADTDREDK 203 (226)
T ss_pred Hhccceeeccc
Confidence 45666665543
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.8e-34 Score=251.74 Aligned_cols=176 Identities=29% Similarity=0.367 Sum_probs=161.0
Q ss_pred CchHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHc-CCCCCCcCCCCCcccccCCC
Q 011309 9 ASGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLEN-GADVNSRNYCGQVTRADYLS 87 (489)
Q Consensus 9 ~s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~-Gad~n~~d~~g~i~~~d~~~ 87 (489)
.+.+|||+|+..|+.++|++|++ .+++...+++..||||||+|+..|+.|+|+.|+.+ |+|+|..++ .
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLls-q~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn----------~ 105 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLS-QPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTN----------G 105 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHh-cCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecC----------C
Confidence 45679999999999999999996 34444444455669999999999999999999998 999999998 9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCH
Q 011309 88 GRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYF 167 (489)
Q Consensus 88 G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~ 167 (489)
|.|+||||+..|+.+|+++|++.++. ++.+|..|+||||.||..|.+
T Consensus 106 G~T~LHyAagK~r~eIaqlLle~ga~---------------------------------i~~kD~~~qtplHRAAavGkl 152 (226)
T KOG4412|consen 106 GQTCLHYAAGKGRLEIAQLLLEKGAL---------------------------------IRIKDKQGQTPLHRAAAVGKL 152 (226)
T ss_pred CcceehhhhcCChhhHHHHHHhcCCC---------------------------------CcccccccCchhHHHHhccch
Confidence 99999999999999999999987643 899999999999999999999
Q ss_pred HHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHH
Q 011309 168 DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARM 239 (489)
Q Consensus 168 e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~ 239 (489)
+++++|+..|+.+|..|+. |+||||.|..-|+.++..+|+++|||++..|++| ||+.+|.-
T Consensus 153 kvie~Li~~~a~~n~qDk~----------G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~ 213 (226)
T KOG4412|consen 153 KVIEYLISQGAPLNTQDKY----------GFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACN 213 (226)
T ss_pred hhHHHHHhcCCCCCccccc----------CccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHH
Confidence 9999999999999999987 9999999999999999999999999999999999 99888753
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=2e-32 Score=271.52 Aligned_cols=193 Identities=20% Similarity=0.156 Sum_probs=167.2
Q ss_pred chHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCC
Q 011309 10 SGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGR 89 (489)
Q Consensus 10 s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~ 89 (489)
..||||+|+..|+.++|++|++.|++++..+ ++||||+|+..|+.++|++|+++|++++.+|. .|+
T Consensus 30 G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d----~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~----------~G~ 95 (284)
T PHA02791 30 GHSALYYAIADNNVRLVCTLLNAGALKNLLE----NEFPLHQAATLEDTKIVKILLFSGMDDSQFDD----------KGN 95 (284)
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC----CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC----------CCC
Confidence 4579999999999999999999999876542 38999999999999999999999999999998 999
Q ss_pred hHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCC-ccHHHHHHHcCCHH
Q 011309 90 TALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGG-ITALHMAALNGYFD 168 (489)
Q Consensus 90 TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G-~TpLh~Aa~~g~~e 168 (489)
||||+|+..|+.+++++|++.+.. ++.++..| .||||+|+..|+.+
T Consensus 96 TpLh~Aa~~g~~eivk~Ll~~gad---------------------------------in~~~~~g~~TpL~~Aa~~g~~e 142 (284)
T PHA02791 96 TALYYAVDSGNMQTVKLFVKKNWR---------------------------------LMFYGKTGWKTSFYHAVMLNDVS 142 (284)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC---------------------------------cCccCCCCCcHHHHHHHHcCCHH
Confidence 999999999999999999987543 66677777 48999999999999
Q ss_pred HHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcH-HHHHHHcCcHhHHH
Q 011309 169 CVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLP-LDVARMWGRHWLEP 247 (489)
Q Consensus 169 ~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~Tp-L~~A~~~g~~~i~~ 247 (489)
+|++|++++++.. +.. .|.||||+|+..|+.++|++||++||+++.+|..|+|| ||+|+..|+.++++
T Consensus 143 ivk~LL~~~~~~~--d~~---------~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~ 211 (284)
T PHA02791 143 IVSYFLSEIPSTF--DLA---------ILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQ 211 (284)
T ss_pred HHHHHHhcCCccc--ccc---------cCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHH
Confidence 9999999876432 211 27899999999999999999999999999999999987 99999999999887
Q ss_pred HhcC-CCCCCCCCC
Q 011309 248 LLAP-SSDAVMPRF 260 (489)
Q Consensus 248 LL~~-~~~~~~~~~ 260 (489)
+|+. +++++..+.
T Consensus 212 lLl~~Ga~in~~~~ 225 (284)
T PHA02791 212 ALFKYDINIYSVNL 225 (284)
T ss_pred HHHHCCCCCccCcc
Confidence 7755 555555544
No 4
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.98 E-value=2.5e-31 Score=278.47 Aligned_cols=221 Identities=21% Similarity=0.191 Sum_probs=186.1
Q ss_pred HHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChH
Q 011309 12 ERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTA 91 (489)
Q Consensus 12 t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~Tp 91 (489)
++|+.|++.|++++|++|++.|++++.....+ .||||+|+..|+.++|++|+++|++++..+. .+.||
T Consensus 4 ~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g--~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~----------~~~t~ 71 (413)
T PHA02875 4 VALCDAILFGELDIARRLLDIGINPNFEIYDG--ISPIKLAMKFRDSEAIKLLMKHGAIPDVKYP----------DIESE 71 (413)
T ss_pred hHHHHHHHhCCHHHHHHHHHCCCCCCccCCCC--CCHHHHHHHcCCHHHHHHHHhCCCCccccCC----------CcccH
Confidence 57999999999999999999999988766554 9999999999999999999999999998877 89999
Q ss_pred HHHHHHcCCHHHHHHHHHccCCC----CCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCH
Q 011309 92 LHFAAVNGHVRCIRLVVADFVPS----VPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYF 167 (489)
Q Consensus 92 Lh~Aa~~g~~~~vk~LL~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~ 167 (489)
||+|+..|+.+++++|++.+... ...+.++++.+...+....+..+... +..++..+..|.||||+|+..|+.
T Consensus 72 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~---gad~~~~~~~g~tpLh~A~~~~~~ 148 (413)
T PHA02875 72 LHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIAR---GADPDIPNTDKFSPLHLAVMMGDI 148 (413)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhC---CCCCCCCCCCCCCHHHHHHHcCCH
Confidence 99999999999999999876532 23456777777777766665555433 345777888899999999999999
Q ss_pred HHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC-cHHHHHHHcCcHhHH
Q 011309 168 DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGW-LPLDVARMWGRHWLE 246 (489)
Q Consensus 168 e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~-TpL~~A~~~g~~~i~ 246 (489)
+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++..+.+|. ||+|+|+..|+.+++
T Consensus 149 ~~v~~Ll~~g~~~~~~d~~----------g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv 218 (413)
T PHA02875 149 KGIELLIDHKACLDIEDCC----------GCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIV 218 (413)
T ss_pred HHHHHHHhcCCCCCCCCCC----------CCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHH
Confidence 9999999999998888866 88999999999999999999999999998888774 788889999999887
Q ss_pred HHhcC-CCCCCC
Q 011309 247 PLLAP-SSDAVM 257 (489)
Q Consensus 247 ~LL~~-~~~~~~ 257 (489)
++|.. +++.++
T Consensus 219 ~~Ll~~gad~n~ 230 (413)
T PHA02875 219 RLFIKRGADCNI 230 (413)
T ss_pred HHHHHCCcCcch
Confidence 77755 444444
No 5
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.98 E-value=9.1e-31 Score=276.22 Aligned_cols=268 Identities=21% Similarity=0.197 Sum_probs=206.5
Q ss_pred HHHHHHHHcCCHHHHHHHhhcCCC-CcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCCh
Q 011309 12 ERLVSAARDGDFVEAKMLLDCNPC-LAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRT 90 (489)
Q Consensus 12 t~L~~Aa~~G~~~~Vk~LL~~g~~-l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~T 90 (489)
..|..|+..|+++.|+.|++.+.. ++.....+ .||||+|+..|+.++|++|+++|++++..+. .|.|
T Consensus 3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~--~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~----------~~~t 70 (434)
T PHA02874 3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVDET--TTPLIDAIRSGDAKIVELFIKHGADINHINT----------KIPH 70 (434)
T ss_pred HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCC--CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC----------CCCC
Confidence 469999999999999999987654 44444443 8999999999999999999999999999987 8999
Q ss_pred HHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHH
Q 011309 91 ALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCV 170 (489)
Q Consensus 91 pLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v 170 (489)
|||+|+..|+.+++++|++.+....... ........+.. ....+..++.++..|.||||+|+..|+.++|
T Consensus 71 ~L~~A~~~~~~~iv~~Ll~~g~~~~~~~-------~~~~~~~~i~~---ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v 140 (434)
T PHA02874 71 PLLTAIKIGAHDIIKLLIDNGVDTSILP-------IPCIEKDMIKT---ILDCGIDVNIKDAELKTFLHYAIKKGDLESI 140 (434)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcch-------hccCCHHHHHH---HHHCcCCCCCCCCCCccHHHHHHHCCCHHHH
Confidence 9999999999999999999876543211 11111111111 1223445788899999999999999999999
Q ss_pred HHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhc
Q 011309 171 QLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLA 250 (489)
Q Consensus 171 ~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~ 250 (489)
++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|.
T Consensus 141 ~~Ll~~gad~n~~d~~----------g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll 210 (434)
T PHA02874 141 KMLFEYGADVNIEDDN----------GCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLI 210 (434)
T ss_pred HHHHhCCCCCCCcCCC----------CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999998866 999999999999999999999999999999999999999999999999988887
Q ss_pred CCCCCCCCCCCCCCCcchhhHHHHHH----------------HHHcCCccccccCCC--CcchhhhhhhhcccccccCCc
Q 011309 251 PSSDAVMPRFHPSNYLSLPLLSVLNV----------------ARECGLLSSTTSSSD--DADTCAVCLERACTVAAEGCR 312 (489)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~pl~~~l~~----------------a~~~G~~~~~~a~~~--~~~~C~iCle~~~~v~~~~C~ 312 (489)
..+..... .+..+.+|++.++.. ....|+++++.+... ..+.....++..+++....-.
T Consensus 211 ~~g~~i~~---~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~ 287 (434)
T PHA02874 211 DHGNHIMN---KCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNK 287 (434)
T ss_pred hCCCCCcC---CCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCC
Confidence 76543211 244566776654321 122466666665433 245666777777777666555
Q ss_pred ch
Q 011309 313 HE 314 (489)
Q Consensus 313 H~ 314 (489)
.+
T Consensus 288 g~ 289 (434)
T PHA02874 288 GE 289 (434)
T ss_pred CC
Confidence 43
No 6
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.97 E-value=6.5e-31 Score=280.60 Aligned_cols=204 Identities=25% Similarity=0.252 Sum_probs=168.4
Q ss_pred hHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHH-------------------------------
Q 011309 11 GERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNE------------------------------- 59 (489)
Q Consensus 11 ~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~e------------------------------- 59 (489)
.+|||.||+.|+.++|++|++.|++++..+..+ .||||+|+..|+.+
T Consensus 38 ~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g--~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~e 115 (477)
T PHA02878 38 FIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRD--LTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVE 115 (477)
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC--CCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHH
Confidence 479999999999999999999999998877655 99999999876654
Q ss_pred ---------------------------------HHHHHHHcCCCCCCcCCCCCcccccCCC-CChHHHHHHHcCCHHHHH
Q 011309 60 ---------------------------------IVALLLENGADVNSRNYCGQVTRADYLS-GRTALHFAAVNGHVRCIR 105 (489)
Q Consensus 60 ---------------------------------ivk~LLe~Gad~n~~d~~g~i~~~d~~~-G~TpLh~Aa~~g~~~~vk 105 (489)
++++|+++|++++..+. . |.||||+|+..|+.++++
T Consensus 116 i~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~----------~~g~tpLh~A~~~~~~~iv~ 185 (477)
T PHA02878 116 IFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDR----------HKGNTALHYATENKDQRLTE 185 (477)
T ss_pred HHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCC----------CCCCCHHHHHHhCCCHHHHH
Confidence 55556666666666665 5 999999999999999999
Q ss_pred HHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccc
Q 011309 106 LVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTF 185 (489)
Q Consensus 106 ~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~ 185 (489)
+|++.++. ++..|..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 186 ~Ll~~gad---------------------------------~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~ 232 (477)
T PHA02878 186 LLLSYGAN---------------------------------VNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDK 232 (477)
T ss_pred HHHHCCCC---------------------------------CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCC
Confidence 99977544 778888999999999999999999999999999999887
Q ss_pred cCCCccccCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCccCC-CCCcHHHHHHHcCcHhHHHHhc-CCCCCCCCCCCC
Q 011309 186 HYGTSMDLIGAGSTPLHFAACG-GNLKCCQVLLSRGASRMSLNC-NGWLPLDVARMWGRHWLEPLLA-PSSDAVMPRFHP 262 (489)
Q Consensus 186 ~~~~~~~~~~~G~TpLh~Aa~~-g~~eivk~LL~~Gadvn~~d~-~G~TpL~~A~~~g~~~i~~LL~-~~~~~~~~~~~~ 262 (489)
. |.||||+|+.. ++.+++++|+++|++++.++. .|+||||+| .++.+++++|. .+++++..
T Consensus 233 ~----------g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~---- 296 (477)
T PHA02878 233 C----------GNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSL---- 296 (477)
T ss_pred C----------CCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCc----
Confidence 6 99999999975 689999999999999999875 799999999 45666666554 45666655
Q ss_pred CCCcchhhHHHHH
Q 011309 263 SNYLSLPLLSVLN 275 (489)
Q Consensus 263 ~~~~~~pl~~~l~ 275 (489)
+..+.+|++.++.
T Consensus 297 d~~g~TpL~~A~~ 309 (477)
T PHA02878 297 NSYKLTPLSSAVK 309 (477)
T ss_pred CCCCCCHHHHHHH
Confidence 4556678765543
No 7
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.97 E-value=9.8e-31 Score=275.98 Aligned_cols=225 Identities=22% Similarity=0.236 Sum_probs=146.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCC----------
Q 011309 9 ASGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCG---------- 78 (489)
Q Consensus 9 ~s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g---------- 78 (489)
...||||.|++.|+.++|++|++.|++++.....+ .||||+|+..|+.++|++|+++|++++......
T Consensus 34 ~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~--~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll 111 (434)
T PHA02874 34 ETTTPLIDAIRSGDAKIVELFIKHGADINHINTKI--PHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTIL 111 (434)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC--CCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHH
Confidence 34689999999999999999999999998766655 899999999999999999998886643211000
Q ss_pred ---CcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCC---CCccccccccccccCCchhhhhhhhhhhhhhhhccccC
Q 011309 79 ---QVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAAD 152 (489)
Q Consensus 79 ---~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~ 152 (489)
.-....+..|.||||+|+..|+.++|++|++.+... +..+.++++.+...+....+..+... +..++..+.
T Consensus 112 ~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~---g~~~n~~~~ 188 (434)
T PHA02874 112 DCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEK---GAYANVKDN 188 (434)
T ss_pred HCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHC---CCCCCCCCC
Confidence 000111238999999999999999999999876642 22344455555554444433333222 223455555
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCc
Q 011309 153 GGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWL 232 (489)
Q Consensus 153 ~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~T 232 (489)
.|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..+. +++++|+ .|++++.+|.+|+|
T Consensus 189 ~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~----------g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~T 256 (434)
T PHA02874 189 NGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKN----------GFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGST 256 (434)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCC----------CCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCC
Confidence 6666666666666666666666666666555543 6666666665543 3444444 45666666666666
Q ss_pred HHHHHHHcC-cHhHHHHhc
Q 011309 233 PLDVARMWG-RHWLEPLLA 250 (489)
Q Consensus 233 pL~~A~~~g-~~~i~~LL~ 250 (489)
|||+|+..+ +.+++++|.
T Consensus 257 pLh~A~~~~~~~~iv~~Ll 275 (434)
T PHA02874 257 PLHHAINPPCDIDIIDILL 275 (434)
T ss_pred HHHHHHhcCCcHHHHHHHH
Confidence 666666554 445544443
No 8
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=8.2e-31 Score=279.56 Aligned_cols=235 Identities=26% Similarity=0.286 Sum_probs=202.2
Q ss_pred CchHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHH-----HHHhCcHHHHHHHHHcCCCCCCcCCCCCcccc
Q 011309 9 ASGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHF-----AAAKGHNEIVALLLENGADVNSRNYCGQVTRA 83 (489)
Q Consensus 9 ~s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~-----Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~ 83 (489)
...+|||.|++.|+.++|++|++.|++++.....+ .||||+ |+..|+.+++++|+++|++++..|.
T Consensus 34 ~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~--~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~------- 104 (480)
T PHA03100 34 KPVLPLYLAKEARNIDVVKILLDNGADINSSTKNN--STPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDN------- 104 (480)
T ss_pred ccchhhhhhhccCCHHHHHHHHHcCCCCCCccccC--cCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCC-------
Confidence 44689999999999999999999999988766655 899999 9999999999999999999999988
Q ss_pred cCCCCChHHHHHH--HcCCHHHHHHHHHccCCC---CCccccccccccccC--CchhhhhhhhhhhhhhhhccccCCCcc
Q 011309 84 DYLSGRTALHFAA--VNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRG--DGSSVKSKCDQSALSKFVNKAADGGIT 156 (489)
Q Consensus 84 d~~~G~TpLh~Aa--~~g~~~~vk~LL~~~~~~---~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~in~~d~~G~T 156 (489)
.|.||||+|+ ..|+.+++++|++.+... +..+.++++.+...+ ....+..+... +..++.+|..|.|
T Consensus 105 ---~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~---g~din~~d~~g~t 178 (480)
T PHA03100 105 ---NGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDK---GVDINAKNRYGYT 178 (480)
T ss_pred ---CCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHC---CCCcccccCCCCC
Confidence 8999999999 999999999999987654 345667788877777 55554444333 3457888899999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCC------CcHHHHHHHcCC--HHHHHHHHHcCCCCCccCC
Q 011309 157 ALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAG------STPLHFAACGGN--LKCCQVLLSRGASRMSLNC 228 (489)
Q Consensus 157 pLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G------~TpLh~Aa~~g~--~eivk~LL~~Gadvn~~d~ 228 (489)
|||+|+..|+.+++++|+++|++++..+.. | .||||+|+..|+ .+++++|+++|++++.+|.
T Consensus 179 pL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~----------~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~ 248 (480)
T PHA03100 179 PLHIAVEKGNIDVIKFLLDNGADINAGDIE----------TLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDV 248 (480)
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCccCCCCC----------CCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999999999988765 5 899999999999 9999999999999999999
Q ss_pred CCCcHHHHHHHcCcHhHHHHhcCC-CCCCCCCCCCCCCcchhhHH
Q 011309 229 NGWLPLDVARMWGRHWLEPLLAPS-SDAVMPRFHPSNYLSLPLLS 272 (489)
Q Consensus 229 ~G~TpL~~A~~~g~~~i~~LL~~~-~~~~~~~~~~~~~~~~pl~~ 272 (489)
.|+||||+|+..|+.+++++|... ++++.. +..+.+|+..
T Consensus 249 ~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~----d~~g~tpl~~ 289 (480)
T PHA03100 249 YGFTPLHYAVYNNNPEFVKYLLDLGANPNLV----NKYGDTPLHI 289 (480)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc----CCCCCcHHHH
Confidence 999999999999999998877664 444443 4566677544
No 9
>PHA02791 ankyrin-like protein; Provisional
Probab=99.97 E-value=6.1e-31 Score=260.88 Aligned_cols=180 Identities=19% Similarity=0.202 Sum_probs=159.3
Q ss_pred chHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCC-
Q 011309 10 SGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSG- 88 (489)
Q Consensus 10 s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G- 88 (489)
..||||.|+..|+.++|++|++.|++++..+..+ +||||+|+..|+.++|++|+++|++++.++. .|
T Consensus 61 ~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G--~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~----------~g~ 128 (284)
T PHA02791 61 NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKG--NTALYYAVDSGNMQTVKLFVKKNWRLMFYGK----------TGW 128 (284)
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC--CCHHHHHHHcCCHHHHHHHHHCCCCcCccCC----------CCC
Confidence 3689999999999999999999999998877665 9999999999999999999999999999887 67
Q ss_pred ChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhcccc-CCCccHHHHHHHcCCH
Q 011309 89 RTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAA-DGGITALHMAALNGYF 167 (489)
Q Consensus 89 ~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d-~~G~TpLh~Aa~~g~~ 167 (489)
.||||+|+..|+.++|++|++.+.. ..| ..|.||||+|+.+|+.
T Consensus 129 ~TpL~~Aa~~g~~eivk~LL~~~~~-----------------------------------~~d~~~g~TpLh~Aa~~g~~ 173 (284)
T PHA02791 129 KTSFYHAVMLNDVSIVSYFLSEIPS-----------------------------------TFDLAILLSCIHITIKNGHV 173 (284)
T ss_pred cHHHHHHHHcCCHHHHHHHHhcCCc-----------------------------------ccccccCccHHHHHHHcCCH
Confidence 4999999999999999999975311 112 2489999999999999
Q ss_pred HHHHHHHhcCCCcccccccCCCccccCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHH
Q 011309 168 DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTP-LHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 246 (489)
Q Consensus 168 e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~Tp-Lh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~ 246 (489)
++|++|+++|++++..+.. |.|| ||+|+..|+.++|++|+++|++++.+|..| ++| ++.+++
T Consensus 174 eiv~lLL~~gAd~n~~d~~----------g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~~~e~~ 236 (284)
T PHA02791 174 DMMILLLDYMTSTNTNNSL----------LFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------DDAEIA 236 (284)
T ss_pred HHHHHHHHCCCCCCcccCC----------CCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------CCHHHH
Confidence 9999999999999998866 7776 999999999999999999999999999955 666 788888
Q ss_pred HHhcCCC
Q 011309 247 PLLAPSS 253 (489)
Q Consensus 247 ~LL~~~~ 253 (489)
++|++..
T Consensus 237 ~~ll~~~ 243 (284)
T PHA02791 237 KMIIEKH 243 (284)
T ss_pred HHHHHhh
Confidence 8887543
No 10
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=5e-30 Score=272.80 Aligned_cols=234 Identities=22% Similarity=0.188 Sum_probs=182.1
Q ss_pred chHHHHHHHHcC---CHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhC-cHHHHHHHHHcCCCCCCcCCCCCcccccC
Q 011309 10 SGERLVSAARDG---DFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKG-HNEIVALLLENGADVNSRNYCGQVTRADY 85 (489)
Q Consensus 10 s~t~L~~Aa~~G---~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G-~~eivk~LLe~Gad~n~~d~~g~i~~~d~ 85 (489)
..||||.|+..| +.++|++|++.|++++..+..| .||||+|+..| +.+++++|+++|++++.+|.
T Consensus 47 g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g--~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~--------- 115 (471)
T PHA03095 47 GKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCG--FTPLHLYLYNATTLDVIKLLIKAGADVNAKDK--------- 115 (471)
T ss_pred CCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCC--CCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCC---------
Confidence 457999999999 9999999999999999887755 99999999999 59999999999999999998
Q ss_pred CCCChHHHHHH--HcCCHHHHHHHHHccCCCC---CccccccccccccCCc--hhhhhhhhhhhhhhhhccccCCCccHH
Q 011309 86 LSGRTALHFAA--VNGHVRCIRLVVADFVPSV---PFEVMNTQIEGDRGDG--SSVKSKCDQSALSKFVNKAADGGITAL 158 (489)
Q Consensus 86 ~~G~TpLh~Aa--~~g~~~~vk~LL~~~~~~~---~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~in~~d~~G~TpL 158 (489)
.|.||||+|+ ..++.+++++|++.+.+.+ ..+.++++.+...... ..+..+ ...+..++..|..|.|||
T Consensus 116 -~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~L---l~~g~~~~~~d~~g~t~L 191 (471)
T PHA03095 116 -VGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLL---IDAGADVYAVDDRFRSLL 191 (471)
T ss_pred -CCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHH---HHcCCCCcccCCCCCCHH
Confidence 8999999999 5668999999999876543 3455666655444321 222222 122334555678888999
Q ss_pred HHHHHc--CCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCH--HHHHHHHHcCCCCCccCCCCCcHH
Q 011309 159 HMAALN--GYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNL--KCCQVLLSRGASRMSLNCNGWLPL 234 (489)
Q Consensus 159 h~Aa~~--g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~--eivk~LL~~Gadvn~~d~~G~TpL 234 (489)
|+|+.. ++.+++++|+++|++++..+.. |.||||+|+..|+. .+++.|++.|+++|.+|..|+|||
T Consensus 192 h~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~----------g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpL 261 (471)
T PHA03095 192 HHHLQSFKPRARIVRELIRAGCDPAATDML----------GNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPL 261 (471)
T ss_pred HHHHHHCCCcHHHHHHHHHcCCCCcccCCC----------CCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 988865 6788889999999998888876 88888888888864 578888888888888888888888
Q ss_pred HHHHHcCcHhHHHHhc-CCCCCCCCCCCCCCCcchhhHH
Q 011309 235 DVARMWGRHWLEPLLA-PSSDAVMPRFHPSNYLSLPLLS 272 (489)
Q Consensus 235 ~~A~~~g~~~i~~LL~-~~~~~~~~~~~~~~~~~~pl~~ 272 (489)
|+|+..|+.+++++|+ .++++++. +..+.+|++.
T Consensus 262 h~A~~~~~~~~v~~LL~~gad~n~~----~~~g~tpl~~ 296 (471)
T PHA03095 262 HYAAVFNNPRACRRLIALGADINAV----SSDGNTPLSL 296 (471)
T ss_pred HHHHHcCCHHHHHHHHHcCCCCccc----CCCCCCHHHH
Confidence 8888888888766654 45555554 4455667543
No 11
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=5e-30 Score=270.75 Aligned_cols=219 Identities=21% Similarity=0.152 Sum_probs=180.1
Q ss_pred chHHHHHHH--HcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCC
Q 011309 10 SGERLVSAA--RDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLS 87 (489)
Q Consensus 10 s~t~L~~Aa--~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~ 87 (489)
..+.||.++ ..++.++|++|+++|++++..+..+ +||||+|+..|+.++|++||++|+++|.+|. .
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G--~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~----------~ 104 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDG--NYPLHIASKINNNRIVAMLLTHGADPNACDK----------Q 104 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCC--CCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC----------C
Confidence 357888776 4557899999999999998877665 9999999999999999999999999999998 9
Q ss_pred CChHHHHHHHcCC--HHHHHHHHHccCCCC----CccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHH
Q 011309 88 GRTALHFAAVNGH--VRCIRLVVADFVPSV----PFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMA 161 (489)
Q Consensus 88 G~TpLh~Aa~~g~--~~~vk~LL~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~A 161 (489)
|+||||+|+..++ .+++++|++.++..+ ..+.++++ +...+....+..+. ..+..++.+|..|.||||+|
T Consensus 105 g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll---~~gad~~~~d~~G~t~Lh~A 180 (446)
T PHA02946 105 HKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIM---SIGFEARIVDKFGKNHIHRH 180 (446)
T ss_pred CCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHH---hccccccccCCCCCCHHHHH
Confidence 9999999998764 789999999887554 23444554 33334444333332 23456888999999999999
Q ss_pred HHcC--CHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCccCCCCCcHHHHH
Q 011309 162 ALNG--YFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGG--NLKCCQVLLSRGASRMSLNCNGWLPLDVA 237 (489)
Q Consensus 162 a~~g--~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g--~~eivk~LL~~Gadvn~~d~~G~TpL~~A 237 (489)
+..+ +.+++++|+++|++++..|.. |.||||+|+..| +.+++++|++ |++++.+|..|+||||+|
T Consensus 181 ~~~~~~~~~~v~~Ll~~Gadin~~d~~----------G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A 249 (446)
T PHA02946 181 LMSDNPKASTISWMMKLGISPSKPDHD----------GNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLL 249 (446)
T ss_pred HHhcCCCHHHHHHHHHcCCCCcccCCC----------CCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHH
Confidence 8755 578999999999999999876 999999999986 8899999985 999999999999999999
Q ss_pred HHcCcH-hHHHHhcCCCCC
Q 011309 238 RMWGRH-WLEPLLAPSSDA 255 (489)
Q Consensus 238 ~~~g~~-~i~~LL~~~~~~ 255 (489)
++.++. +++++|...+..
T Consensus 250 ~~~~~~~~~~~~Ll~~g~~ 268 (446)
T PHA02946 250 IKTLSPAHLINKLLSTSNV 268 (446)
T ss_pred HHhCChHHHHHHHHhCCCC
Confidence 999884 777777666543
No 12
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=1.7e-30 Score=269.67 Aligned_cols=188 Identities=29% Similarity=0.346 Sum_probs=129.6
Q ss_pred hHHHHHHHHcCCHHHHHHHhhc-CCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCC
Q 011309 11 GERLVSAARDGDFVEAKMLLDC-NPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGR 89 (489)
Q Consensus 11 ~t~L~~Aa~~G~~~~Vk~LL~~-g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~ 89 (489)
...++.|++.|+++.|+.|++. |.+++..+.+ |.|+||+||.+++++++++|+++||++|..+. .-+.
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~--g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG---------~l~s 113 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESEGESVNNPDRE--GVTLLHWAAINNRLDVARYLISHGADVNAIGG---------VLGS 113 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcC--CccceeHHHHcCcHHHHHHHHHcCCCccccCC---------CCCC
Confidence 4568999999999999999998 7777776664 48999999999999999999999999999874 2788
Q ss_pred hHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHH
Q 011309 90 TALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDC 169 (489)
Q Consensus 90 TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~ 169 (489)
||||||+++|+..+|++|+++|++ ++.+|..|.||||+|++.|+.-.
T Consensus 114 tPLHWAar~G~~~vv~lLlqhGAd---------------------------------pt~~D~~G~~~lHla~~~~~~~~ 160 (600)
T KOG0509|consen 114 TPLHWAARNGHISVVDLLLQHGAD---------------------------------PTLKDKQGLTPLHLAAQFGHTAL 160 (600)
T ss_pred CcchHHHHcCcHHHHHHHHHcCCC---------------------------------CceecCCCCcHHHHHHHhCchHH
Confidence 999999999999999999998876 44445555555555555555555
Q ss_pred HHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCcHHHHHHHcCcHhHHHH
Q 011309 170 VQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLN-CNGWLPLDVARMWGRHWLEPL 248 (489)
Q Consensus 170 v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d-~~G~TpL~~A~~~g~~~i~~L 248 (489)
|-|||.+|++++.+|.+ |+||||+|+.+|....++.||..|++++.+| ..|.||||+|+..|+..++.|
T Consensus 161 vayll~~~~d~d~~D~~----------grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~L 230 (600)
T KOG0509|consen 161 VAYLLSKGADIDLRDNN----------GRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKL 230 (600)
T ss_pred HHHHHHhcccCCCcCCC----------CCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEeh
Confidence 55555555555555544 5555555555555444555555555555444 455555555555555544443
Q ss_pred hcCC
Q 011309 249 LAPS 252 (489)
Q Consensus 249 L~~~ 252 (489)
|.++
T Consensus 231 l~~g 234 (600)
T KOG0509|consen 231 LLEG 234 (600)
T ss_pred hhhc
Confidence 3333
No 13
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=9.4e-30 Score=271.42 Aligned_cols=220 Identities=25% Similarity=0.287 Sum_probs=195.4
Q ss_pred chHHHHH-----HHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHH--HhCcHHHHHHHHHcCCCCCCcCCCCCccc
Q 011309 10 SGERLVS-----AARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAA--AKGHNEIVALLLENGADVNSRNYCGQVTR 82 (489)
Q Consensus 10 s~t~L~~-----Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa--~~G~~eivk~LLe~Gad~n~~d~~g~i~~ 82 (489)
..+|||. |+..|+.+++++|++.|++++..+..+ .||||+|+ ..|+.++|++|+++|++++..+.
T Consensus 68 ~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g--~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~------ 139 (480)
T PHA03100 68 NSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNG--ITPLLYAISKKSNSYSIVEYLLDNGANVNIKNS------ 139 (480)
T ss_pred CcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCC--CchhhHHHhcccChHHHHHHHHHcCCCCCccCC------
Confidence 3579999 999999999999999999997666555 89999999 99999999999999999999998
Q ss_pred ccCCCCChHHHHHHHcC--CHHHHHHHHHccCCC---CCccccccccccccCCchhhhhhhhhhhhhhhhccccCCC---
Q 011309 83 ADYLSGRTALHFAAVNG--HVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGG--- 154 (489)
Q Consensus 83 ~d~~~G~TpLh~Aa~~g--~~~~vk~LL~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G--- 154 (489)
.|.||||+|+..| +.+++++|++.+... +..+.++++.+...+....+..+... +..++..+..|
T Consensus 140 ----~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~---ga~~~~~~~~~~~~ 212 (480)
T PHA03100 140 ----DGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDN---GADINAGDIETLLF 212 (480)
T ss_pred ----CCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHc---CCCccCCCCCCCcH
Confidence 8999999999999 999999999987654 33566788888888866665555433 34567777778
Q ss_pred ---ccHHHHHHHcCC--HHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Q 011309 155 ---ITALHMAALNGY--FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCN 229 (489)
Q Consensus 155 ---~TpLh~Aa~~g~--~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~ 229 (489)
.||||+|+..|+ .+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|+|++.+|..
T Consensus 213 ~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~----------g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~ 282 (480)
T PHA03100 213 TIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVY----------GFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKY 282 (480)
T ss_pred HHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence 899999999999 99999999999999999876 999999999999999999999999999999999
Q ss_pred CCcHHHHHHHcCcHhHHHHhcCCCC
Q 011309 230 GWLPLDVARMWGRHWLEPLLAPSSD 254 (489)
Q Consensus 230 G~TpL~~A~~~g~~~i~~LL~~~~~ 254 (489)
|+|||++|+..++.+++++|.+.+.
T Consensus 283 g~tpl~~A~~~~~~~iv~~Ll~~g~ 307 (480)
T PHA03100 283 GDTPLHIAILNNNKEIFKLLLNNGP 307 (480)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhcCC
Confidence 9999999999999999888877554
No 14
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.3e-29 Score=269.48 Aligned_cols=220 Identities=21% Similarity=0.167 Sum_probs=185.5
Q ss_pred CchHHHHHHHHcC-CHHHHHHHhhcCCCCcccCCCCCCchHHHHHH--HhCcHHHHHHHHHcCCCCCCcCCCCCcccccC
Q 011309 9 ASGERLVSAARDG-DFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAA--AKGHNEIVALLLENGADVNSRNYCGQVTRADY 85 (489)
Q Consensus 9 ~s~t~L~~Aa~~G-~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa--~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~ 85 (489)
...||||+|+..| ..+++++|++.|++++..+..+ +||||+|+ ..++.+++++|+++|++++..|.
T Consensus 82 ~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g--~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~--------- 150 (471)
T PHA03095 82 CGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVG--RTPLHVYLSGFNINPKVIRLLLRKGADVNALDL--------- 150 (471)
T ss_pred CCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCC--CCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCC---------
Confidence 3468999999999 5999999999999998877665 89999999 56689999999999999999998
Q ss_pred CCCChHHHHHHHcC--CHHHHHHHHHccCCCC---CccccccccccccC--CchhhhhhhhhhhhhhhhccccCCCccHH
Q 011309 86 LSGRTALHFAAVNG--HVRCIRLVVADFVPSV---PFEVMNTQIEGDRG--DGSSVKSKCDQSALSKFVNKAADGGITAL 158 (489)
Q Consensus 86 ~~G~TpLh~Aa~~g--~~~~vk~LL~~~~~~~---~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~in~~d~~G~TpL 158 (489)
.|.||||+|+..+ +.+++++|++.+.... ..+.++++.+.... ....+..+ ...+..++.+|..|.|||
T Consensus 151 -~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~L---l~~g~~~~~~d~~g~tpL 226 (471)
T PHA03095 151 -YGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVREL---IRAGCDPAATDMLGNTPL 226 (471)
T ss_pred -CCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHH---HHcCCCCcccCCCCCCHH
Confidence 9999999999876 6899999999876443 34455555544332 22222222 233455789999999999
Q ss_pred HHHHHcCCH--HHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHH
Q 011309 159 HMAALNGYF--DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDV 236 (489)
Q Consensus 159 h~Aa~~g~~--e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~ 236 (489)
|+|+..|+. .+++.|++.|++++..+.. |+||||+|+..|+.++|++||++|||++.+|.+|+||||+
T Consensus 227 h~Aa~~~~~~~~~v~~ll~~g~din~~d~~----------g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~ 296 (471)
T PHA03095 227 HSMATGSSCKRSLVLPLLIAGISINARNRY----------GQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSL 296 (471)
T ss_pred HHHHhcCCchHHHHHHHHHcCCCCCCcCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 999999975 6889999999999999966 9999999999999999999999999999999999999999
Q ss_pred HHHcCcHhHHHHhcCCC
Q 011309 237 ARMWGRHWLEPLLAPSS 253 (489)
Q Consensus 237 A~~~g~~~i~~LL~~~~ 253 (489)
|+..|+.+++.+|+...
T Consensus 297 A~~~~~~~~v~~LL~~~ 313 (471)
T PHA03095 297 MVRNNNGRAVRAALAKN 313 (471)
T ss_pred HHHhCCHHHHHHHHHhC
Confidence 99999999988776644
No 15
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.8e-29 Score=240.60 Aligned_cols=174 Identities=20% Similarity=0.242 Sum_probs=153.0
Q ss_pred hHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhC--cHHHHHHHHHcCCCCCCcCCCCCcccccCCCC
Q 011309 11 GERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKG--HNEIVALLLENGADVNSRNYCGQVTRADYLSG 88 (489)
Q Consensus 11 ~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G--~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G 88 (489)
.+|||.|+..|++++|+.|++.. +..+.. |.||||+|+..+ +.+++++|+++|+++|.++. ..|
T Consensus 22 ~~pL~~A~~~~~~~~vk~Li~~~---n~~~~~--g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~---------~~g 87 (209)
T PHA02859 22 CNPLFYYVEKDDIEGVKKWIKFV---NDCNDL--YETPIFSCLEKDKVNVEILKFLIENGADVNFKTR---------DNN 87 (209)
T ss_pred CcHHHHHHHhCcHHHHHHHHHhh---hccCcc--CCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCC---------CCC
Confidence 57899999999999999999863 333444 489999999855 89999999999999999863 179
Q ss_pred ChHHHHHHHc---CCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHH--
Q 011309 89 RTALHFAAVN---GHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAAL-- 163 (489)
Q Consensus 89 ~TpLh~Aa~~---g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~-- 163 (489)
+||||+|+.. ++.+++++|++.+++ +|.+|..|.||||+|+.
T Consensus 88 ~TpLh~a~~~~~~~~~eiv~~Ll~~gad---------------------------------in~~d~~G~TpLh~a~~~~ 134 (209)
T PHA02859 88 LSALHHYLSFNKNVEPEILKILIDSGSS---------------------------------ITEEDEDGKNLLHMYMCNF 134 (209)
T ss_pred CCHHHHHHHhCccccHHHHHHHHHCCCC---------------------------------CCCcCCCCCCHHHHHHHhc
Confidence 9999998864 479999999987654 88899999999999986
Q ss_pred cCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHH-HHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcC
Q 011309 164 NGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHF-AACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWG 241 (489)
Q Consensus 164 ~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~-Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g 241 (489)
.++.+++++|+++|++++.+|.. |.||||. |+..++.+++++|+++|++++.+|..|+|||++|+..+
T Consensus 135 ~~~~~iv~~Li~~gadin~~d~~----------g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 135 NVRINVIKLLIDSGVSFLNKDFD----------NNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred cCCHHHHHHHHHcCCCcccccCC----------CCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 46899999999999999999876 9999995 56788999999999999999999999999999998764
No 16
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=1.8e-29 Score=266.61 Aligned_cols=211 Identities=18% Similarity=0.171 Sum_probs=173.6
Q ss_pred chHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCc--HHHHHHHHHcCCCCCC-cCCCCCcccccCC
Q 011309 10 SGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGH--NEIVALLLENGADVNS-RNYCGQVTRADYL 86 (489)
Q Consensus 10 s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~--~eivk~LLe~Gad~n~-~d~~g~i~~~d~~ 86 (489)
..||||+|++.|+.++|++||++|++++..+..+ .||||+|+..++ .+++++|+++|++++. .|.
T Consensus 72 G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g--~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~---------- 139 (446)
T PHA02946 72 GNYPLHIASKINNNRIVAMLLTHGADPNACDKQH--KTPLYYLSGTDDEVIERINLLVQYGAKINNSVDE---------- 139 (446)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCC--CCHHHHHHHcCCchHHHHHHHHHcCCCcccccCC----------
Confidence 4689999999999999999999999998877766 899999998764 8999999999999995 566
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHccCCC---CCccccccccccccCCc--hhhhhhhhhhhhhhhhccccCCCccHHHHH
Q 011309 87 SGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDG--SSVKSKCDQSALSKFVNKAADGGITALHMA 161 (489)
Q Consensus 87 ~G~TpLh~Aa~~g~~~~vk~LL~~~~~~---~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~in~~d~~G~TpLh~A 161 (489)
.|.|||| |+..|+.+++++|++.+... +..+.++++.+...... ..+..+ ...+..++.+|..|.||||+|
T Consensus 140 ~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~L---l~~Gadin~~d~~G~TpLH~A 215 (446)
T PHA02946 140 EGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWM---MKLGISPSKPDHDGNTPLHIV 215 (446)
T ss_pred CCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHH---HHcCCCCcccCCCCCCHHHHH
Confidence 8999997 67789999999999876543 34556666665544332 222222 223456889999999999999
Q ss_pred HHcC--CHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCccCCCCCcHHHHHH
Q 011309 162 ALNG--YFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGN-LKCCQVLLSRGASRMSLNCNGWLPLDVAR 238 (489)
Q Consensus 162 a~~g--~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~-~eivk~LL~~Gadvn~~d~~G~TpL~~A~ 238 (489)
+..| +.+++++|++ |++++.++.. |.||||+|+..++ .+++++|+++|++++ ++| +++|+
T Consensus 216 a~~~~~~~~iv~lLl~-gadin~~d~~----------G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~-----~~~-~~~a~ 278 (446)
T PHA02946 216 CSKTVKNVDIINLLLP-STDVNKQNKF----------GDSPLTLLIKTLSPAHLINKLLSTSNVIT-----DQT-VNICI 278 (446)
T ss_pred HHcCCCcHHHHHHHHc-CCCCCCCCCC----------CCCHHHHHHHhCChHHHHHHHHhCCCCCC-----CcH-HHHHH
Confidence 9986 8899999995 8999999977 9999999999988 589999999997754 344 89999
Q ss_pred HcCcHhHHHHhcCCC
Q 011309 239 MWGRHWLEPLLAPSS 253 (489)
Q Consensus 239 ~~g~~~i~~LL~~~~ 253 (489)
..++.+++++|...+
T Consensus 279 ~~~~~~~~e~l~~~g 293 (446)
T PHA02946 279 FYDRDDVLEIINDKG 293 (446)
T ss_pred HcCchHHHHHHHHcC
Confidence 999999988887654
No 17
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=4.9e-30 Score=266.27 Aligned_cols=176 Identities=32% Similarity=0.437 Sum_probs=163.9
Q ss_pred HHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChH
Q 011309 12 ERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTA 91 (489)
Q Consensus 12 t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~Tp 91 (489)
+.||+||.+++++++++||++|+++|.....- +.||||+|+++|+..+|++||++|||++.+|. +|.||
T Consensus 80 tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l-~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~----------~G~~~ 148 (600)
T KOG0509|consen 80 TLLHWAAINNRLDVARYLISHGADVNAIGGVL-GSTPLHWAARNGHISVVDLLLQHGADPTLKDK----------QGLTP 148 (600)
T ss_pred cceeHHHHcCcHHHHHHHHHcCCCccccCCCC-CCCcchHHHHcCcHHHHHHHHHcCCCCceecC----------CCCcH
Confidence 46999999999999999999999999887533 38999999999999999999999999999998 99999
Q ss_pred HHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHH
Q 011309 92 LHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQ 171 (489)
Q Consensus 92 Lh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~ 171 (489)
||+|++.||.-.|-+||..+++ +|.+|..|+||||+|+.+|+...+.
T Consensus 149 lHla~~~~~~~~vayll~~~~d---------------------------------~d~~D~~grTpLmwAaykg~~~~v~ 195 (600)
T KOG0509|consen 149 LHLAAQFGHTALVAYLLSKGAD---------------------------------IDLRDNNGRTPLMWAAYKGFALFVR 195 (600)
T ss_pred HHHHHHhCchHHHHHHHHhccc---------------------------------CCCcCCCCCCHHHHHHHhcccHHHH
Confidence 9999999999999999976533 8999999999999999999988899
Q ss_pred HHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHc
Q 011309 172 LLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMW 240 (489)
Q Consensus 172 ~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~ 240 (489)
.|+..|+.++..|.. .|.||||+|+..|+..++++|++.|++.+.+|.+|.||+.+|...
T Consensus 196 ~LL~f~a~~~~~d~~---------~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 196 RLLKFGASLLLTDDN---------HGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HHHHhcccccccccc---------cCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 999999999999954 499999999999999999988888999999999999999999665
No 18
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=7e-29 Score=276.00 Aligned_cols=115 Identities=29% Similarity=0.287 Sum_probs=88.3
Q ss_pred hhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCC
Q 011309 145 KFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGN-LKCCQVLLSRGASR 223 (489)
Q Consensus 145 ~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~-~eivk~LL~~Gadv 223 (489)
..+|.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..++ ..++++|+++|+++
T Consensus 366 adin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~----------g~T~Lh~A~~~~~~~~~vk~Ll~~gadi 435 (682)
T PHA02876 366 ANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQK----------IGTALHFALCGTNPYMSVKTLIDRGANV 435 (682)
T ss_pred CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCC----------CCchHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 446778888888888888888888888888888888887765 7888888887655 56788888889999
Q ss_pred CccCCCCCcHHHHHHHcC-cHhHHHHhcC-CCCCCCCCCCCCCCcchhhHHH
Q 011309 224 MSLNCNGWLPLDVARMWG-RHWLEPLLAP-SSDAVMPRFHPSNYLSLPLLSV 273 (489)
Q Consensus 224 n~~d~~G~TpL~~A~~~g-~~~i~~LL~~-~~~~~~~~~~~~~~~~~pl~~~ 273 (489)
|.+|.+|+||||+|+..+ +.+++++|.. +++++.. +..+.+|+..+
T Consensus 436 n~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~----d~~g~tpl~~a 483 (682)
T PHA02876 436 NSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAI----NIQNQYPLLIA 483 (682)
T ss_pred CcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCC----CCCCCCHHHHH
Confidence 888999999999998876 5677666654 4555444 45566776543
No 19
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=3.8e-29 Score=278.15 Aligned_cols=272 Identities=21% Similarity=0.183 Sum_probs=189.2
Q ss_pred hHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCCh
Q 011309 11 GERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRT 90 (489)
Q Consensus 11 ~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~T 90 (489)
.++|+.|+..|+.+++++|++.|++++..+.++ +||||+|+..|+.++|++|+++|++++..+. .|.|
T Consensus 146 ~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G--~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~----------~g~t 213 (682)
T PHA02876 146 MKLIKERIQQDELLIAEMLLEGGADVNAKDIYC--ITPIHYAAERGNAKMVNLLLSYGADVNIIAL----------DDLS 213 (682)
T ss_pred hHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCC--CCHHHHHHHCCCHHHHHHHHHCCCCcCccCC----------CCCC
Confidence 357899999999999999999999999887665 9999999999999999999999999999987 8899
Q ss_pred HHHHHHHcCCHHHHHHHHHccCCCC--------------------------------CccccccccccccCCchhhhhhh
Q 011309 91 ALHFAAVNGHVRCIRLVVADFVPSV--------------------------------PFEVMNTQIEGDRGDGSSVKSKC 138 (489)
Q Consensus 91 pLh~Aa~~g~~~~vk~LL~~~~~~~--------------------------------~~~~~~l~~~~~~~~~~~~~~~~ 138 (489)
|||+|+..|+.+++++|++.+.... ..+.++++.+...+....+..++
T Consensus 214 ~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lL 293 (682)
T PHA02876 214 VLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKL 293 (682)
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHH
Confidence 9999999999999988886543221 12344444444433322111111
Q ss_pred hhhhhhhhhccccCCCccHHHHHHHcC-CHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHc-CCHHHHHHH
Q 011309 139 DQSALSKFVNKAADGGITALHMAALNG-YFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACG-GNLKCCQVL 216 (489)
Q Consensus 139 ~~~~~~~~in~~d~~G~TpLh~Aa~~g-~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~-g~~eivk~L 216 (489)
...+..++..|..|.||||+|+..| ..+++++|+..|++++..+.. |.||||+|+.. ++.+++++|
T Consensus 294 --l~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~----------g~TpLh~A~~~~~~~~iv~lL 361 (682)
T PHA02876 294 --LERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRL----------YITPLHQASTLDRNKDIVITL 361 (682)
T ss_pred --HHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccC----------CCcHHHHHHHhCCcHHHHHHH
Confidence 1123346667777888888888777 477778888888777777765 77888888774 467788888
Q ss_pred HHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhcCC-CCCCCCCCCCCCCcchhhHHHH---------HH----------
Q 011309 217 LSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS-SDAVMPRFHPSNYLSLPLLSVL---------NV---------- 276 (489)
Q Consensus 217 L~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~~~-~~~~~~~~~~~~~~~~pl~~~l---------~~---------- 276 (489)
+++|++++.+|..|+||||+|+..|+.+++++|.+. ++.+.. +..+.+|++.++ +.
T Consensus 362 l~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~----~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~ 437 (682)
T PHA02876 362 LELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEAL----SQKIGTALHFALCGTNPYMSVKTLIDRGANVNS 437 (682)
T ss_pred HHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcccc----CCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCc
Confidence 888888888888888888888888888777666554 333332 233445554332 11
Q ss_pred HHHcCCccccccCCCC--cchhhhhhhhcccccccC
Q 011309 277 ARECGLLSSTTSSSDD--ADTCAVCLERACTVAAEG 310 (489)
Q Consensus 277 a~~~G~~~~~~a~~~~--~~~C~iCle~~~~v~~~~ 310 (489)
....|+++++.+...+ .+.....++.++++....
T Consensus 438 ~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d 473 (682)
T PHA02876 438 KNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAIN 473 (682)
T ss_pred CCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCC
Confidence 1223455555544332 355556667776665443
No 20
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.96 E-value=7.9e-29 Score=265.66 Aligned_cols=227 Identities=16% Similarity=0.143 Sum_probs=180.3
Q ss_pred chHHHHHHHHc--CCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhC------cHHHHHHHHHcCCCCCCcCCCCCcc
Q 011309 10 SGERLVSAARD--GDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKG------HNEIVALLLENGADVNSRNYCGQVT 81 (489)
Q Consensus 10 s~t~L~~Aa~~--G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G------~~eivk~LLe~Gad~n~~d~~g~i~ 81 (489)
..++||.++.. ++.++|++||++|++++... .+ .||||.|+.++ +.++|++||++|||+|.+|.
T Consensus 35 g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~--~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~----- 106 (494)
T PHA02989 35 GNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YI--ETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTF----- 106 (494)
T ss_pred CCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CC--CCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCC-----
Confidence 34677765544 36899999999999998765 44 79999998754 57899999999999999998
Q ss_pred cccCCCCChHHHHHHHc---CCHHHHHHHHHccCCC----CCccccccccccccC--Cchhhhhhhhhhhhhhhhcc-cc
Q 011309 82 RADYLSGRTALHFAAVN---GHVRCIRLVVADFVPS----VPFEVMNTQIEGDRG--DGSSVKSKCDQSALSKFVNK-AA 151 (489)
Q Consensus 82 ~~d~~~G~TpLh~Aa~~---g~~~~vk~LL~~~~~~----~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~in~-~d 151 (489)
.|.||||.|+.. |+.+++++|++.|++. +..+.++++.+.... ....+..+.. .+..++. .+
T Consensus 107 -----~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~---~Gadi~~~~~ 178 (494)
T PHA02989 107 -----NGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLS---FGVNLFEKTS 178 (494)
T ss_pred -----CCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHH---cCCCcccccc
Confidence 899999988765 6789999999998766 245667777665432 3333443332 2344555 57
Q ss_pred CCCccHHHHHHHcC----CHHHHHHHHhcCCCcccccccCCCccc----------------------------cCCCCCc
Q 011309 152 DGGITALHMAALNG----YFDCVQLLLDLHANVSAVTFHYGTSMD----------------------------LIGAGST 199 (489)
Q Consensus 152 ~~G~TpLh~Aa~~g----~~e~v~~LL~~Gadvn~~~~~~~~~~~----------------------------~~~~G~T 199 (489)
..|.||||+|+..+ +.+++++|+++|++++..+..+.+++. ....|+|
T Consensus 179 ~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~T 258 (494)
T PHA02989 179 LYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFN 258 (494)
T ss_pred ccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCC
Confidence 78999999998764 899999999999999988753333321 1245999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhcCC
Q 011309 200 PLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 252 (489)
Q Consensus 200 pLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~~~ 252 (489)
|||+|+..|+.++|++||++|+|++.+|..|+||||+|+..|+.+++++|++.
T Consensus 259 pL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~ 311 (494)
T PHA02989 259 PLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQL 311 (494)
T ss_pred HHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999998888764
No 21
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.96 E-value=9.4e-29 Score=270.64 Aligned_cols=218 Identities=19% Similarity=0.143 Sum_probs=172.9
Q ss_pred chHHHHHHHH--cCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCc--HHHHHHHHHcCCCCCCcCCCCCcccccC
Q 011309 10 SGERLVSAAR--DGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGH--NEIVALLLENGADVNSRNYCGQVTRADY 85 (489)
Q Consensus 10 s~t~L~~Aa~--~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~--~eivk~LLe~Gad~n~~d~~g~i~~~d~ 85 (489)
..+|||.|+. .++.++|++|++.|++++..+..+ .||||+|+..|+ .++|++||++|||+|.+|.
T Consensus 177 G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G--~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~--------- 245 (764)
T PHA02716 177 GYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHL--ITPLHTYLITGNVCASVIKKIIELGGDMDMKCV--------- 245 (764)
T ss_pred CCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCC--CCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCC---------
Confidence 4579999875 468999999999999998877665 999999999996 4999999999999999998
Q ss_pred CCCChHHHHHH---HcCCHHHHHHHHHccCCCCCccccc--cc---cccccCCchhhhhhhhhhhhhhhhccccCCCccH
Q 011309 86 LSGRTALHFAA---VNGHVRCIRLVVADFVPSVPFEVMN--TQ---IEGDRGDGSSVKSKCDQSALSKFVNKAADGGITA 157 (489)
Q Consensus 86 ~~G~TpLh~Aa---~~g~~~~vk~LL~~~~~~~~~~~~~--l~---~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~Tp 157 (489)
.|+||||+|+ ..++.+++++|++.+..... ...+ ++ .+...+....++.+.. .+..++.+|..|.||
T Consensus 246 -~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~-~~~~~~L~~~i~AA~~g~leiVklLLe---~GAdIN~kD~~G~TP 320 (764)
T PHA02716 246 -NGMSPIMTYIINIDNINPEITNIYIESLDGNKV-KNIPMILHSYITLARNIDISVVYSFLQ---PGVKLHYKDSAGRTC 320 (764)
T ss_pred -CCCCHHHHHHHhhhccCHHHHHHHHHhcccccc-ccchhhhHHHHHHHHcCCHHHHHHHHh---CCCceeccCCCCCCH
Confidence 9999999986 56899999999975432111 1111 11 1222333333333332 344588999999999
Q ss_pred HHHHHH--cCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHH--------------cCCHHHHHHHHHcCC
Q 011309 158 LHMAAL--NGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAAC--------------GGNLKCCQVLLSRGA 221 (489)
Q Consensus 158 Lh~Aa~--~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~--------------~g~~eivk~LL~~Ga 221 (489)
||+|+. .++.++|++|+++|++++.+|.. |+||||+|+. .++.++|++|+++|+
T Consensus 321 LH~Aaa~~~~~~eIVklLLe~GADIN~kD~~----------G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GA 390 (764)
T PHA02716 321 LHQYILRHNISTDIIKLLHEYGNDLNEPDNI----------GNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGA 390 (764)
T ss_pred HHHHHHHhCCCchHHHHHHHcCCCCccCCCC----------CCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCC
Confidence 999875 46899999999999999999876 9999999875 378999999999999
Q ss_pred CCCccCCCCCcHHHH----HHHcCcHhHHHHhcCCC
Q 011309 222 SRMSLNCNGWLPLDV----ARMWGRHWLEPLLAPSS 253 (489)
Q Consensus 222 dvn~~d~~G~TpL~~----A~~~g~~~i~~LL~~~~ 253 (489)
|++.+|..|+||||. |...++.+++++|....
T Consensus 391 DIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~ 426 (764)
T PHA02716 391 DITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDK 426 (764)
T ss_pred CCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCc
Confidence 999999999999994 23356788988887654
No 22
>PHA02798 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.6e-28 Score=262.99 Aligned_cols=226 Identities=16% Similarity=0.097 Sum_probs=169.0
Q ss_pred HHHHHHH--HcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHh-----CcHHHHHHHHHcCCCCCCcCCCCCccccc
Q 011309 12 ERLVSAA--RDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAK-----GHNEIVALLLENGADVNSRNYCGQVTRAD 84 (489)
Q Consensus 12 t~L~~Aa--~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~-----G~~eivk~LLe~Gad~n~~d~~g~i~~~d 84 (489)
++++.+. ..++.++|++|+++|++++..+..+ .||||+|+.+ ++.+++++|+++|+|+|.+|.
T Consensus 38 ~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g--~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~-------- 107 (489)
T PHA02798 38 SIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEY--STPLCTILSNIKDYKHMLDIVKILIENGADINKKNS-------- 107 (489)
T ss_pred hHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCC--CChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCC--------
Confidence 4444333 3457888888888888888766555 7888888764 668888888888888888887
Q ss_pred CCCCChHHHHHHHcC---CHHHHHHHHHccCCCC---CccccccccccccCC---chhhhhhhhhhhhhhhhcccc-CCC
Q 011309 85 YLSGRTALHFAAVNG---HVRCIRLVVADFVPSV---PFEVMNTQIEGDRGD---GSSVKSKCDQSALSKFVNKAA-DGG 154 (489)
Q Consensus 85 ~~~G~TpLh~Aa~~g---~~~~vk~LL~~~~~~~---~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~in~~d-~~G 154 (489)
.|+||||+|+..+ +.+++++|++.|++.+ ..+.++++.+...+. ...+..+. ..+..++..+ ..|
T Consensus 108 --~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll---~~gadin~~~~~~~ 182 (489)
T PHA02798 108 --DGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLL---EKGVDINTHNNKEK 182 (489)
T ss_pred --CcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHH---HhCCCcccccCcCC
Confidence 8888888888875 6788888888776543 345666766666554 23333322 2234456554 468
Q ss_pred ccHHHHHHHc----CCHHHHHHHHhcCCCcccccccCCCccc-----------------------------cCCCCCcHH
Q 011309 155 ITALHMAALN----GYFDCVQLLLDLHANVSAVTFHYGTSMD-----------------------------LIGAGSTPL 201 (489)
Q Consensus 155 ~TpLh~Aa~~----g~~e~v~~LL~~Gadvn~~~~~~~~~~~-----------------------------~~~~G~TpL 201 (489)
.||||.++.. ++.+++++|+++|++++..+..+.+++. ....|.|||
T Consensus 183 ~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL 262 (489)
T PHA02798 183 YDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPL 262 (489)
T ss_pred CcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHH
Confidence 8899988764 4788999999999888876544333211 123599999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhcCC
Q 011309 202 HFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 252 (489)
Q Consensus 202 h~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~~~ 252 (489)
|+|+..|+.+++++||++|||++.+|..|+||||+|+..++.+++.+|++.
T Consensus 263 ~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~ 313 (489)
T PHA02798 263 YYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNK 313 (489)
T ss_pred HHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999988776654
No 23
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.96 E-value=2.9e-28 Score=260.25 Aligned_cols=171 Identities=25% Similarity=0.289 Sum_probs=147.8
Q ss_pred HHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHH
Q 011309 25 EAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCI 104 (489)
Q Consensus 25 ~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~v 104 (489)
++++|++.|++++..+.. .|.||||+|+..|+.+++++|+++|++++..|. .|.||||+|+..|+.+++
T Consensus 149 iv~~Ll~~gadin~~~~~-~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~----------~g~tpLh~A~~~~~~~iv 217 (477)
T PHA02878 149 ITKLLLSYGADINMKDRH-KGNTALHYATENKDQRLTELLLSYGANVNIPDK----------TNNSPLHHAVKHYNKPIV 217 (477)
T ss_pred HHHHHHHcCCCCCccCCC-CCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCC----------CCCCHHHHHHHhCCHHHH
Confidence 555566666776665554 149999999999999999999999999999998 999999999999999999
Q ss_pred HHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHc-CCHHHHHHHHhcCCCcccc
Q 011309 105 RLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALN-GYFDCVQLLLDLHANVSAV 183 (489)
Q Consensus 105 k~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~-g~~e~v~~LL~~Gadvn~~ 183 (489)
++|++.++. ++.+|..|.||||+|+.. ++.+++++|+++|++++..
T Consensus 218 ~~Ll~~ga~---------------------------------in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~ 264 (477)
T PHA02878 218 HILLENGAS---------------------------------TDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAK 264 (477)
T ss_pred HHHHHcCCC---------------------------------CCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCcc
Confidence 999987654 788899999999999976 7999999999999999998
Q ss_pred cccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcC-cHhHHHHhc
Q 011309 184 TFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWG-RHWLEPLLA 250 (489)
Q Consensus 184 ~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g-~~~i~~LL~ 250 (489)
+.. .|.||||+| .++.+++++|+++|+|++.+|.+|+||||+|+..+ ..++.++|.
T Consensus 265 ~~~---------~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li 321 (477)
T PHA02878 265 SYI---------LGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILI 321 (477)
T ss_pred CCC---------CCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHH
Confidence 752 399999999 57899999999999999999999999999999854 334554443
No 24
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=2.3e-29 Score=251.65 Aligned_cols=188 Identities=31% Similarity=0.391 Sum_probs=168.4
Q ss_pred chHHHHHHHHcCCHHHHHHHhhc-CCCCccc------CCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCccc
Q 011309 10 SGERLVSAARDGDFVEAKMLLDC-NPCLAKY------STFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTR 82 (489)
Q Consensus 10 s~t~L~~Aa~~G~~~~Vk~LL~~-g~~l~~~------~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~ 82 (489)
.++||.+||++|+.++|++|+++ ++++... ...-.|.+||-.|+..||++||++|+++|+++|....
T Consensus 42 g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~------ 115 (615)
T KOG0508|consen 42 GGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTR------ 115 (615)
T ss_pred CCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccc------
Confidence 45899999999999999999993 4443221 1112358999999999999999999999999998887
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHH
Q 011309 83 ADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAA 162 (489)
Q Consensus 83 ~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa 162 (489)
...|||.-|+..||.++||+|++++++ ++..|..|.|-||+|+
T Consensus 116 ----TNStPLraACfDG~leivKyLvE~gad---------------------------------~~IanrhGhTcLmIa~ 158 (615)
T KOG0508|consen 116 ----TNSTPLRAACFDGHLEIVKYLVEHGAD---------------------------------PEIANRHGHTCLMIAC 158 (615)
T ss_pred ----cCCccHHHHHhcchhHHHHHHHHcCCC---------------------------------CcccccCCCeeEEeee
Confidence 788999999999999999999988765 7889999999999999
Q ss_pred HcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCc
Q 011309 163 LNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGR 242 (489)
Q Consensus 163 ~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~ 242 (489)
..||.+++++|++.|+|+|.++.. |+|+||.+++.|++|++++||.+|+.++ +|..|.|||..|+..|+
T Consensus 159 ykGh~~I~qyLle~gADvn~ks~k----------GNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~ 227 (615)
T KOG0508|consen 159 YKGHVDIAQYLLEQGADVNAKSYK----------GNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGH 227 (615)
T ss_pred ccCchHHHHHHHHhCCCcchhccc----------CchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhhhcc
Confidence 999999999999999999999976 9999999999999999999999999884 56779999999999999
Q ss_pred HhHHHHhcC
Q 011309 243 HWLEPLLAP 251 (489)
Q Consensus 243 ~~i~~LL~~ 251 (489)
.+++.+|..
T Consensus 228 ~~iVe~L~~ 236 (615)
T KOG0508|consen 228 TDIVERLLQ 236 (615)
T ss_pred hHHHHHHhc
Confidence 999988874
No 25
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=1.8e-28 Score=258.96 Aligned_cols=247 Identities=25% Similarity=0.303 Sum_probs=167.6
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHH
Q 011309 13 RLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTAL 92 (489)
Q Consensus 13 ~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpL 92 (489)
|||.|+..|++..++.|+++|.+++..+..+ .||||+|+..++.|+.+.|++.|+++-..|. +|.+|+
T Consensus 124 plh~A~~~~~~s~L~~Ll~~~~dvnl~de~~--~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~----------~~~~~i 191 (929)
T KOG0510|consen 124 PLHLAADSGNYSCLKLLLDYGADVNLEDENG--FTPLHLAARKNKVEAKKELINKGADPCKSDI----------DGNFPI 191 (929)
T ss_pred chhhccccchHHHHHHHHHhcCCccccccCC--CchhhHHHhcChHHHHHHHHhcCCCCCcccC----------cCCchH
Confidence 5666666666666666666665555544433 5666666666666655666666666655555 455555
Q ss_pred HHHHHcCCHHHHHHHHH-----c---cCCCCCccccccccccccCCchhhhhhhhh------------hhhhhhhccccC
Q 011309 93 HFAAVNGHVRCIRLVVA-----D---FVPSVPFEVMNTQIEGDRGDGSSVKSKCDQ------------SALSKFVNKAAD 152 (489)
Q Consensus 93 h~Aa~~g~~~~vk~LL~-----~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------~~~~~~in~~d~ 152 (489)
|.|+..|..++.+.++. . ..-.+....++++.+...++...++..+.. ......+|..|+
T Consensus 192 H~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~ 271 (929)
T KOG0510|consen 192 HEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDN 271 (929)
T ss_pred HHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccc
Confidence 55555555555555553 1 112223445566666666666555444332 123345889999
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCC-CCCccCCCC
Q 011309 153 GGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS-RGA-SRMSLNCNG 230 (489)
Q Consensus 153 ~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~-~Ga-dvn~~d~~G 230 (489)
+|.||||+|++.|+.++|+.|+..|++++.++.+ +.||||.||..|++++|+-||+ .|. ..|..|-.|
T Consensus 272 dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d----------~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g 341 (929)
T KOG0510|consen 272 DGCTPLHYAARQGGPESVDNLLGFGASINSKNKD----------EESPLHFAAIYGRINTVERLLQESDTRLLNESDLHG 341 (929)
T ss_pred cCCchHHHHHHcCChhHHHHHHHcCCcccccCCC----------CCCchHHHHHcccHHHHHHHHhCcCccccccccccC
Confidence 9999999999999999999999999999999876 8999999999999999999998 443 467889999
Q ss_pred CcHHHHHHHcCcHhHHHHhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHcCCccc
Q 011309 231 WLPLDVARMWGRHWLEPLLAPSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSS 285 (489)
Q Consensus 231 ~TpL~~A~~~g~~~i~~LL~~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~G~~~~ 285 (489)
.||||+|++.||..++++|++.+.........+.++.++| +.|+.+|..+.
T Consensus 342 ~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaL----H~Aa~~g~~~a 392 (929)
T KOG0510|consen 342 MTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTAL----HLAAKYGNTSA 392 (929)
T ss_pred CCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhh----hHHHHhccHHH
Confidence 9999999999999999999888776553112255566663 34555555433
No 26
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.96 E-value=5.4e-28 Score=264.67 Aligned_cols=234 Identities=18% Similarity=0.031 Sum_probs=171.5
Q ss_pred HHcCCHHHHHHHhhcC-CCCccc-CCCCCCchHHHHHHHh--CcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHH
Q 011309 18 ARDGDFVEAKMLLDCN-PCLAKY-STFGGLNSPLHFAAAK--GHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALH 93 (489)
Q Consensus 18 a~~G~~~~Vk~LL~~g-~~l~~~-~~~~~g~TpLh~Aa~~--G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh 93 (489)
.+.+++++|++|++.| ++++.. +..+ .||||+|+.. ++.++|++|+++|+++|.+|. .|.||||
T Consensus 150 ~~~v~leiVk~LLe~G~ADIN~~~d~~G--~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~----------~G~TPLH 217 (764)
T PHA02716 150 TRGIDLDLIKYMVDVGIVNLNYVCKKTG--YGILHAYLGNMYVDIDILEWLCNNGVNVNLQNN----------HLITPLH 217 (764)
T ss_pred ccCCCHHHHHHHHHCCCCCcccccCCCC--CcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCC----------CCCCHHH
Confidence 3569999999999999 998876 4433 9999998754 678999999999999999998 9999999
Q ss_pred HHHHcCC--HHHHHHHHHccCCCCC---ccccccccccc---cCCchhhhhhhhhhhhhhhhccccCCCccHHH---HHH
Q 011309 94 FAAVNGH--VRCIRLVVADFVPSVP---FEVMNTQIEGD---RGDGSSVKSKCDQSALSKFVNKAADGGITALH---MAA 162 (489)
Q Consensus 94 ~Aa~~g~--~~~vk~LL~~~~~~~~---~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh---~Aa 162 (489)
+|+..|+ .++|++|++.|++.+. .+.++++.+.. ......+..+..... .+.. ....++|+ .|+
T Consensus 218 ~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d----~n~~-~~~~~~L~~~i~AA 292 (764)
T PHA02716 218 TYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLD----GNKV-KNIPMILHSYITLA 292 (764)
T ss_pred HHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcc----cccc-ccchhhhHHHHHHH
Confidence 9999995 5999999998876432 34455543321 111111111111000 0000 01112233 377
Q ss_pred HcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHH-
Q 011309 163 LNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAAC--GGNLKCCQVLLSRGASRMSLNCNGWLPLDVARM- 239 (489)
Q Consensus 163 ~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~--~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~- 239 (489)
..|+.++|++|+++|++++.+|.. |+||||+|+. .++.++|++|+++|++++.+|..|+||||+|+.
T Consensus 293 ~~g~leiVklLLe~GAdIN~kD~~----------G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~ 362 (764)
T PHA02716 293 RNIDISVVYSFLQPGVKLHYKDSA----------GRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSM 362 (764)
T ss_pred HcCCHHHHHHHHhCCCceeccCCC----------CCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHh
Confidence 889999999999999999999876 9999999874 468999999999999999999999999999875
Q ss_pred -------------cCcHhHHHHhcC-CCCCCCCCCCCCCCcchhhHHHHHHHHHcCC
Q 011309 240 -------------WGRHWLEPLLAP-SSDAVMPRFHPSNYLSLPLLSVLNVARECGL 282 (489)
Q Consensus 240 -------------~g~~~i~~LL~~-~~~~~~~~~~~~~~~~~pl~~~l~~a~~~G~ 282 (489)
.++.+++++|.. +++++.. +..+.+|++..+..+...+.
T Consensus 363 lav~~~ld~~~~~~~~~eVVklLL~~GADIn~k----n~~G~TPLh~y~~~a~n~~~ 415 (764)
T PHA02716 363 LSVVNILDPETDNDIRLDVIQCLISLGADITAV----NCLGYTPLTSYICTAQNYMY 415 (764)
T ss_pred hhhhccccccccccChHHHHHHHHHCCCCCCCc----CCCCCChHHHHHHHHHhcCh
Confidence 267788877655 4444443 56778888755555544443
No 27
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=3.2e-28 Score=257.03 Aligned_cols=231 Identities=25% Similarity=0.253 Sum_probs=193.4
Q ss_pred CchHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCC
Q 011309 9 ASGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSG 88 (489)
Q Consensus 9 ~s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G 88 (489)
+..+|||+|+.....+.|++|++.|++....+... ++|||+|+..|+.+++++|+++|+|+|..|. .|
T Consensus 87 ~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~--~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de----------~~ 154 (929)
T KOG0510|consen 87 ADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNK--NAPLHLAADSGNYSCLKLLLDYGADVNLEDE----------NG 154 (929)
T ss_pred ccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhc--cCchhhccccchHHHHHHHHHhcCCcccccc----------CC
Confidence 33578999999999999999999999998887776 8999999999999999999999999999998 99
Q ss_pred ChHHHHHHHcCCHHHHHHHHHccCCC---CCccccccccccccCCchhhhhhhhhhh--hhhhhccccCCCccHHHHHHH
Q 011309 89 RTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSVKSKCDQSA--LSKFVNKAADGGITALHMAAL 163 (489)
Q Consensus 89 ~TpLh~Aa~~g~~~~vk~LL~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~in~~d~~G~TpLh~Aa~ 163 (489)
.||||+|+.+++.+..+.|++.+++. +..+..+++.+...+.....+....... ....+|.-+..|.||||.|+.
T Consensus 155 ~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve 234 (929)
T KOG0510|consen 155 FTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVE 234 (929)
T ss_pred CchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhh
Confidence 99999999999999889999876643 3445556677777777777766655332 334588889999999999999
Q ss_pred cCCHHHHHHHHhcCCCccccc-----ccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Q 011309 164 NGYFDCVQLLLDLHANVSAVT-----FHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVAR 238 (489)
Q Consensus 164 ~g~~e~v~~LL~~Gadvn~~~-----~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~ 238 (489)
.|+.++++.+|+.|+...... ..+.-..+.+..|.||||+|++.|+.+.|+.|+..|++++.+++++.||||.|+
T Consensus 235 ~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA 314 (929)
T KOG0510|consen 235 GGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAA 314 (929)
T ss_pred cCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHH
Confidence 999999999999986543322 110011123355999999999999999999999999999999999999999999
Q ss_pred HcCcHhHHHHhcC
Q 011309 239 MWGRHWLEPLLAP 251 (489)
Q Consensus 239 ~~g~~~i~~LL~~ 251 (489)
.+|+.+.++-|++
T Consensus 315 ~yg~~ntv~rLL~ 327 (929)
T KOG0510|consen 315 IYGRINTVERLLQ 327 (929)
T ss_pred HcccHHHHHHHHh
Confidence 9999987665555
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1.7e-27 Score=255.32 Aligned_cols=222 Identities=19% Similarity=0.102 Sum_probs=170.4
Q ss_pred cCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHh--CcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHH
Q 011309 20 DGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAK--GHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAV 97 (489)
Q Consensus 20 ~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~--G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~ 97 (489)
..+.++|++||++|++++.. .. |.||||+++.. ++.++|++||++|||+|.++ .+.||||.|+.
T Consensus 13 ~~~~~~v~~LL~~GadvN~~-~~--g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-----------~~~tpL~~a~~ 78 (494)
T PHA02989 13 TVDKNALEFLLRTGFDVNEE-YR--GNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-----------YIETPLCAVLR 78 (494)
T ss_pred cCcHHHHHHHHHcCCCcccc-cC--CCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-----------CCCCcHHHHHh
Confidence 58899999999999999886 33 37999876654 37899999999999999886 47999999975
Q ss_pred ------cCCHHHHHHHHHccCCCCC---ccccccccccccC---Cchhhhhhhhhhhhhhhh-ccccCCCccHHHHHHHc
Q 011309 98 ------NGHVRCIRLVVADFVPSVP---FEVMNTQIEGDRG---DGSSVKSKCDQSALSKFV-NKAADGGITALHMAALN 164 (489)
Q Consensus 98 ------~g~~~~vk~LL~~~~~~~~---~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~i-n~~d~~G~TpLh~Aa~~ 164 (489)
.++.+++++|++.|++.+. .+.++++.+.... ....++.+. ..+..+ +.+|..|.||||+|+..
T Consensus 79 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll---~~Gadin~~~d~~g~tpLh~a~~~ 155 (494)
T PHA02989 79 NREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLL---SKGINVNDVKNSRGYNLLHMYLES 155 (494)
T ss_pred ccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHH---HCCCCcccccCCCCCCHHHHHHHh
Confidence 5889999999998876443 4556666443332 223333332 334557 78899999999999764
Q ss_pred --CCHHHHHHHHhcCCCcccc-cccCCCccccCCCCCcHHHHHHHcC----CHHHHHHHHHcCCCCCc------------
Q 011309 165 --GYFDCVQLLLDLHANVSAV-TFHYGTSMDLIGAGSTPLHFAACGG----NLKCCQVLLSRGASRMS------------ 225 (489)
Q Consensus 165 --g~~e~v~~LL~~Gadvn~~-~~~~~~~~~~~~~G~TpLh~Aa~~g----~~eivk~LL~~Gadvn~------------ 225 (489)
++.++|++|+++|++++.. +.. |.||||+|+..+ +.++|++|+++|++++.
T Consensus 156 ~~~~~~iv~~Ll~~Gadi~~~~~~~----------g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~ 225 (494)
T PHA02989 156 FSVKKDVIKILLSFGVNLFEKTSLY----------GLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESF 225 (494)
T ss_pred ccCCHHHHHHHHHcCCCcccccccc----------CCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHH
Confidence 6899999999999999984 444 889999987754 88999999988887654
Q ss_pred --------------------------cCCCCCcHHHHHHHcCcHhHHHHhcC-CCCCCCCCCCCCCCcchhhHH
Q 011309 226 --------------------------LNCNGWLPLDVARMWGRHWLEPLLAP-SSDAVMPRFHPSNYLSLPLLS 272 (489)
Q Consensus 226 --------------------------~d~~G~TpL~~A~~~g~~~i~~LL~~-~~~~~~~~~~~~~~~~~pl~~ 272 (489)
+|..|+||||+|+..|+.+++++|++ +++++.. +..+.+|++.
T Consensus 226 ~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~----d~~G~TpL~~ 295 (494)
T PHA02989 226 LDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNV----SKDGDTVLTY 295 (494)
T ss_pred HHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCcccc----CCCCCCHHHH
Confidence 45669999999999999998876655 5555554 4566777554
No 29
>PHA02798 ankyrin-like protein; Provisional
Probab=99.95 E-value=2.6e-27 Score=253.65 Aligned_cols=226 Identities=13% Similarity=0.061 Sum_probs=173.0
Q ss_pred CHHHHHHHhhcCCCCcccCCCCCCchHHHHHHH--hCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHc-
Q 011309 22 DFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAA--KGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVN- 98 (489)
Q Consensus 22 ~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~--~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~- 98 (489)
+++.|+.||+.+. ++.. .+ +.|+++.+.. .++.++|++|+++|+++|..|. .|.||||+|+.+
T Consensus 17 ~~~~v~~ll~~~~-~~~~-~~--~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~----------~g~TpL~~~~~n~ 82 (489)
T PHA02798 17 KLSTVKLLIKSCN-PNEI-VN--EYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDN----------EYSTPLCTILSNI 82 (489)
T ss_pred cHHHHHHHHhcCC-hhhh-cc--cchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCC----------CCCChHHHHHHhH
Confidence 4779999998653 3333 22 3677775554 4589999999999999999998 999999999864
Q ss_pred ----CCHHHHHHHHHccCCCC---CccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCC---HH
Q 011309 99 ----GHVRCIRLVVADFVPSV---PFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY---FD 168 (489)
Q Consensus 99 ----g~~~~vk~LL~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~---~e 168 (489)
++.+++++|++.|++.+ ..+.++++.+...+..............+..++..|..|.||||+|+..++ .+
T Consensus 83 ~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~ 162 (489)
T PHA02798 83 KDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIE 162 (489)
T ss_pred HhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHH
Confidence 78999999999887644 456778887766553322222222334456789999999999999999998 99
Q ss_pred HHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHc----CCHHHHHHHHHcCCC----------------------
Q 011309 169 CVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACG----GNLKCCQVLLSRGAS---------------------- 222 (489)
Q Consensus 169 ~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~----g~~eivk~LL~~Gad---------------------- 222 (489)
++++|+++|++++..+.. .|.||||.++.. ++.+++++|+++|++
T Consensus 163 vv~~Ll~~gadin~~~~~---------~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~ 233 (489)
T PHA02798 163 IIKLLLEKGVDINTHNNK---------EKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYD 233 (489)
T ss_pred HHHHHHHhCCCcccccCc---------CCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhh
Confidence 999999999999987643 288999988764 478888888887764
Q ss_pred -----------------CCccCCCCCcHHHHHHHcCcHhHHHHhcC-CCCCCCCCCCCCCCcchhhHHHH
Q 011309 223 -----------------RMSLNCNGWLPLDVARMWGRHWLEPLLAP-SSDAVMPRFHPSNYLSLPLLSVL 274 (489)
Q Consensus 223 -----------------vn~~d~~G~TpL~~A~~~g~~~i~~LL~~-~~~~~~~~~~~~~~~~~pl~~~l 274 (489)
+|.+|..|+||||+|+.+|+.+++++|++ +++++.. +..+.+|++.++
T Consensus 234 ~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~----d~~G~TpL~~A~ 299 (489)
T PHA02798 234 NKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINII----TELGNTCLFTAF 299 (489)
T ss_pred cccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCccccc----CCCCCcHHHHHH
Confidence 45567789999999999999998877755 6666655 456778866443
No 30
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95 E-value=2.2e-27 Score=244.87 Aligned_cols=187 Identities=16% Similarity=0.074 Sum_probs=161.9
Q ss_pred HHHHcCCHHHHHHHhhcCCCCc------ccCCCCCCchHHHHHHH--hCcHHHHHHHHHcCCCCCCcCCCCCcccccCCC
Q 011309 16 SAARDGDFVEAKMLLDCNPCLA------KYSTFGGLNSPLHFAAA--KGHNEIVALLLENGADVNSRNYCGQVTRADYLS 87 (489)
Q Consensus 16 ~Aa~~G~~~~Vk~LL~~g~~l~------~~~~~~~g~TpLh~Aa~--~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~ 87 (489)
.|+..+..+++++|+.+|++++ .+... ++|+||.|+. .|+.++|++|+++|||++.. +
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~--~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~------------~ 148 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNS--VQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI------------E 148 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhhhhhhcccc--ccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC------------C
Confidence 7999999999999999999987 54444 3999999999 99999999999999999984 4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCH
Q 011309 88 GRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYF 167 (489)
Q Consensus 88 G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~ 167 (489)
+.||||+|+..|+.+++++|++.|+...... ..+..+..|.|++|.|+..++.
T Consensus 149 ~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~---------------------------~~~l~~~~~~t~l~~a~~~~~~ 201 (437)
T PHA02795 149 CLNAYFRGICKKESSVVEFILNCGIPDENDV---------------------------KLDLYKIIQYTRGFLVDEPTVL 201 (437)
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCcccccc---------------------------cchhhhhhccchhHHHHhcCHH
Confidence 6899999999999999999999875321100 0111223577999999999999
Q ss_pred HHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCc-----
Q 011309 168 DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGR----- 242 (489)
Q Consensus 168 e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~----- 242 (489)
+++++|+++|+++|.++.. |.||||+|+..|+.++|++|+++||+++.+|..|+||||+|+..|+
T Consensus 202 eIve~LIs~GADIN~kD~~----------G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~ 271 (437)
T PHA02795 202 EIYKLCIPYIEDINQLDAG----------GRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARR 271 (437)
T ss_pred HHHHHHHhCcCCcCcCCCC----------CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCccccc
Confidence 9999999999999999976 9999999999999999999999999999999999999999999984
Q ss_pred ---HhHHHHhcCCC
Q 011309 243 ---HWLEPLLAPSS 253 (489)
Q Consensus 243 ---~~i~~LL~~~~ 253 (489)
.+++++|+..+
T Consensus 272 ~~~~eIvelLL~~g 285 (437)
T PHA02795 272 ETHLKILEILLREP 285 (437)
T ss_pred ccHHHHHHHHHhCC
Confidence 57887776543
No 31
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.95 E-value=3.8e-27 Score=246.94 Aligned_cols=208 Identities=19% Similarity=0.162 Sum_probs=178.7
Q ss_pred CchHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCc-CCCCCcccccCCC
Q 011309 9 ASGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSR-NYCGQVTRADYLS 87 (489)
Q Consensus 9 ~s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~-d~~g~i~~~d~~~ 87 (489)
...||||.|+..|+.++|++|++.|++++.....+ .||||+|+..|+.++|++|++.|++++.. +. .
T Consensus 34 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~--~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~----------~ 101 (413)
T PHA02875 34 DGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDI--ESELHDAVEEGDVKAVEELLDLGKFADDVFYK----------D 101 (413)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCc--ccHHHHHHHCCCHHHHHHHHHcCCcccccccC----------C
Confidence 45689999999999999999999999877654444 89999999999999999999999877543 43 7
Q ss_pred CChHHHHHHHcCCHHHHHHHHHccCCCC---CccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHc
Q 011309 88 GRTALHFAAVNGHVRCIRLVVADFVPSV---PFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALN 164 (489)
Q Consensus 88 G~TpLh~Aa~~g~~~~vk~LL~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~ 164 (489)
|.||||+|+..|+.+++++|++.+++.. ..+.++++.+...+....+..+... +..++.+|..|.||||+|+..
T Consensus 102 g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~TpL~~A~~~ 178 (413)
T PHA02875 102 GMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDH---KACLDIEDCCGCTPLIIAMAK 178 (413)
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc---CCCCCCCCCCCCCHHHHHHHc
Confidence 9999999999999999999999877543 3567788888888877766665543 345788999999999999999
Q ss_pred CCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcc---CCCCCcHHHHHHHc
Q 011309 165 GYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSL---NCNGWLPLDVARMW 240 (489)
Q Consensus 165 g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~---d~~G~TpL~~A~~~ 240 (489)
|+.+++++|+++|++++..+.. .+.||||+|+..|+.++|++|+++|+|++.. +.++.|||+++...
T Consensus 179 g~~eiv~~Ll~~ga~~n~~~~~---------~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~ 248 (413)
T PHA02875 179 GDIAICKMLLDSGANIDYFGKN---------GCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICNM 248 (413)
T ss_pred CCHHHHHHHHhCCCCCCcCCCC---------CCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHhh
Confidence 9999999999999999998866 2468999999999999999999999999875 67899999988754
No 32
>PHA02917 ankyrin-like protein; Provisional
Probab=99.95 E-value=1.2e-26 Score=254.57 Aligned_cols=220 Identities=17% Similarity=0.104 Sum_probs=145.3
Q ss_pred HHHHHHHhhcCCCCcccCCCCCCchHHHHHHHh---CcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcC
Q 011309 23 FVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAK---GHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNG 99 (489)
Q Consensus 23 ~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~---G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g 99 (489)
++.|+.||..+..++..+.++ +||||+|+.. |+.++|++||++|++++..+. .|+||||+|+..|
T Consensus 12 ~~~~~~l~~~~~~~~~~d~~g--~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~----------~g~TpL~~Aa~~g 79 (661)
T PHA02917 12 LDELKQMLRDRDPNDTRNQFK--NNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNW----------RQLTPLEEYTNSR 79 (661)
T ss_pred HHHHHHHHhccCcccccCCCC--CcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCC----------CCCCHHHHHHHcC
Confidence 455666666555554434333 6777765444 556777777777777766665 6667777777666
Q ss_pred CHH----HHHHHHHccCCCCCccc-cccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHH--HcCCHHHHHH
Q 011309 100 HVR----CIRLVVADFVPSVPFEV-MNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAA--LNGYFDCVQL 172 (489)
Q Consensus 100 ~~~----~vk~LL~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa--~~g~~e~v~~ 172 (489)
+.+ ++++|++.+...+.... ...+.+...+....++.+. ..+..+|.+|..|.||||.|+ ..|+.++|++
T Consensus 80 ~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll---~~Gadin~~d~~g~T~L~~~~a~~~~~~eivkl 156 (661)
T PHA02917 80 HVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLV---EHGFDLSVKCENHRSVIENYVMTDDPVPEIIDL 156 (661)
T ss_pred ChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHH---HcCCCCCccCCCCccHHHHHHHccCCCHHHHHH
Confidence 643 34555543221111111 1112222233333333332 224458999999999999654 5789999999
Q ss_pred HHhcCCCccccccc--CCCcc-c-cCCCCCcHHHHHHH-----------cCCHHHHHHHHHcCCCCCccCCCCCcHHHHH
Q 011309 173 LLDLHANVSAVTFH--YGTSM-D-LIGAGSTPLHFAAC-----------GGNLKCCQVLLSRGASRMSLNCNGWLPLDVA 237 (489)
Q Consensus 173 LL~~Gadvn~~~~~--~~~~~-~-~~~~G~TpLh~Aa~-----------~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A 237 (489)
|+++|++++..+.. +|... + ....+.||||+|+. .++.++|++|+++|||++.+|.+|+||||+|
T Consensus 157 Li~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A 236 (661)
T PHA02917 157 FIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYY 236 (661)
T ss_pred HHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHH
Confidence 99999999876532 11100 0 00135699999986 4689999999999999999999999999999
Q ss_pred HHcCcH--hHHHHhcCCCCCCC
Q 011309 238 RMWGRH--WLEPLLAPSSDAVM 257 (489)
Q Consensus 238 ~~~g~~--~i~~LL~~~~~~~~ 257 (489)
+..|+. +++++|.++++.+.
T Consensus 237 ~~~g~~~~eivk~Li~g~d~~~ 258 (661)
T PHA02917 237 IKSSHIDIDIVKLLMKGIDNTA 258 (661)
T ss_pred HHcCCCcHHHHHHHHhCCcccc
Confidence 999986 69999988876643
No 33
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=4e-27 Score=235.60 Aligned_cols=208 Identities=26% Similarity=0.306 Sum_probs=175.7
Q ss_pred HHHHHHcCCHHHHHHHhhcCCCCc---ccCCCCCCchHHHHHHHhCcHHHHHHHHH-cCCCCCCcCCCCCccccc--CCC
Q 011309 14 LVSAARDGDFVEAKMLLDCNPCLA---KYSTFGGLNSPLHFAAAKGHNEIVALLLE-NGADVNSRNYCGQVTRAD--YLS 87 (489)
Q Consensus 14 L~~Aa~~G~~~~Vk~LL~~g~~l~---~~~~~~~g~TpLh~Aa~~G~~eivk~LLe-~Gad~n~~d~~g~i~~~d--~~~ 87 (489)
.+.|++.|.+..++.|+-...+.. ......+|.|||-+||++||.++|++|++ -++++..... ..+| ...
T Consensus 8 ~~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~Gs----V~FDge~Ie 83 (615)
T KOG0508|consen 8 VINAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGS----VRFDGETIE 83 (615)
T ss_pred HHHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCce----EEeCCcccC
Confidence 458999999999988887644221 11222234799999999999999999999 4788765432 1121 237
Q ss_pred CChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCH
Q 011309 88 GRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYF 167 (489)
Q Consensus 88 G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~ 167 (489)
|.+||..|+..||.++||.|++.++. +|.......|||-.|+..||.
T Consensus 84 gappLWaAsaAGHl~vVk~L~~~ga~---------------------------------VN~tT~TNStPLraACfDG~l 130 (615)
T KOG0508|consen 84 GAPPLWAASAAGHLEVVKLLLRRGAS---------------------------------VNDTTRTNSTPLRAACFDGHL 130 (615)
T ss_pred CCchhhHHhccCcHHHHHHHHHhcCc---------------------------------cccccccCCccHHHHHhcchh
Confidence 89999999999999999999987643 777777788999999999999
Q ss_pred HHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHH
Q 011309 168 DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEP 247 (489)
Q Consensus 168 e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~ 247 (489)
++|+||+++|+|++..+.+ |.|.||+|+.+|+.+|+++|++.|||+|.++..|+|+||.++..|+.++++
T Consensus 131 eivKyLvE~gad~~Ianrh----------GhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq 200 (615)
T KOG0508|consen 131 EIVKYLVEHGADPEIANRH----------GHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQ 200 (615)
T ss_pred HHHHHHHHcCCCCcccccC----------CCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHH
Confidence 9999999999999999987 999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCCCcchhhHH
Q 011309 248 LLAPSSDAVMPRFHPSNYLSLPLLS 272 (489)
Q Consensus 248 LL~~~~~~~~~~~~~~~~~~~pl~~ 272 (489)
+|++.+..... ++++-+||+.
T Consensus 201 ~Ll~~ga~i~~----d~~GmtPL~~ 221 (615)
T KOG0508|consen 201 LLLKHGAKIDV----DGHGMTPLLL 221 (615)
T ss_pred HHHhCCceeee----cCCCCchHHH
Confidence 99988776544 6678888654
No 34
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.94 E-value=8.5e-26 Score=255.59 Aligned_cols=177 Identities=23% Similarity=0.295 Sum_probs=154.8
Q ss_pred chHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCC
Q 011309 10 SGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGR 89 (489)
Q Consensus 10 s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~ 89 (489)
..++|+.||..|+.++++.|++.|++++..+..+ +||||+|+.+|+.++|++|+++|+++|.+|. +|+
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G--~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~----------~G~ 592 (823)
T PLN03192 525 MASNLLTVASTGNAALLEELLKAKLDPDIGDSKG--RTPLHIAASKGYEDCVLVLLKHACNVHIRDA----------NGN 592 (823)
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC--CCHHHHHHHcChHHHHHHHHhcCCCCCCcCC----------CCC
Confidence 3578999999999999999999999988776655 8999999999999999999999999999998 899
Q ss_pred hHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHH
Q 011309 90 TALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDC 169 (489)
Q Consensus 90 TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~ 169 (489)
||||+|+..||.+++++|++.+.. . ....|.++||+|+..|+.++
T Consensus 593 TpL~~A~~~g~~~iv~~L~~~~~~---------------------------------~--~~~~~~~~L~~Aa~~g~~~~ 637 (823)
T PLN03192 593 TALWNAISAKHHKIFRILYHFASI---------------------------------S--DPHAAGDLLCTAAKRNDLTA 637 (823)
T ss_pred CHHHHHHHhCCHHHHHHHHhcCcc---------------------------------c--CcccCchHHHHHHHhCCHHH
Confidence 999999999999999999864321 1 12346689999999999999
Q ss_pred HHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC-CcHHHHHHHcCcH
Q 011309 170 VQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNG-WLPLDVARMWGRH 243 (489)
Q Consensus 170 v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G-~TpL~~A~~~g~~ 243 (489)
+++|+++|+++|..|.. |.||||+|+..|+.+++++|+++|||++..|..| +||++++......
T Consensus 638 v~~Ll~~Gadin~~d~~----------G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~~~ 702 (823)
T PLN03192 638 MKELLKQGLNVDSEDHQ----------GATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQKR 702 (823)
T ss_pred HHHHHHCCCCCCCCCCC----------CCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 99999999999998876 9999999999999999999999999999999888 8999888654433
No 35
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.93 E-value=4.6e-25 Score=210.28 Aligned_cols=170 Identities=16% Similarity=0.142 Sum_probs=143.0
Q ss_pred CchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcC--CHHHHHHHHHccCCCCCcccccc
Q 011309 45 LNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNG--HVRCIRLVVADFVPSVPFEVMNT 122 (489)
Q Consensus 45 g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g--~~~~vk~LL~~~~~~~~~~~~~l 122 (489)
+.||||+|+..|+.++|+.|++. ++..|. .|.||||+|+..+ +.+++++|++.+.+
T Consensus 21 ~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~----------~g~TpLh~a~~~~~~~~eiv~~Ll~~gad--------- 78 (209)
T PHA02859 21 YCNPLFYYVEKDDIEGVKKWIKF---VNDCND----------LYETPIFSCLEKDKVNVEILKFLIENGAD--------- 78 (209)
T ss_pred cCcHHHHHHHhCcHHHHHHHHHh---hhccCc----------cCCCHHHHHHHcCCCCHHHHHHHHHCCCC---------
Confidence 48999999999999999999986 455666 8999999999865 89999999987654
Q ss_pred ccccccCCchhhhhhhhhhhhhhhhcccc-CCCccHHHHHHHc---CCHHHHHHHHhcCCCcccccccCCCccccCCCCC
Q 011309 123 QIEGDRGDGSSVKSKCDQSALSKFVNKAA-DGGITALHMAALN---GYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGS 198 (489)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~in~~d-~~G~TpLh~Aa~~---g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~ 198 (489)
+|.++ ..|.||||+|+.. ++.+++++|+++|++++.++.. |.
T Consensus 79 ------------------------vn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~----------G~ 124 (209)
T PHA02859 79 ------------------------VNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDED----------GK 124 (209)
T ss_pred ------------------------CCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCC----------CC
Confidence 77776 4899999998864 4799999999999999999876 99
Q ss_pred cHHHHHHH--cCCHHHHHHHHHcCCCCCccCCCCCcHHHH-HHHcCcHhHHHHhcC-CCCCCCCCCCCCCCcchhhHHHH
Q 011309 199 TPLHFAAC--GGNLKCCQVLLSRGASRMSLNCNGWLPLDV-ARMWGRHWLEPLLAP-SSDAVMPRFHPSNYLSLPLLSVL 274 (489)
Q Consensus 199 TpLh~Aa~--~g~~eivk~LL~~Gadvn~~d~~G~TpL~~-A~~~g~~~i~~LL~~-~~~~~~~~~~~~~~~~~pl~~~l 274 (489)
||||+|+. .++.+++++|+++|++++.+|.+|.||||. |+..++.+++++|.. +++++.. +..+.+|+..+.
T Consensus 125 TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~----d~~g~tpl~la~ 200 (209)
T PHA02859 125 NLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINET----NKSGYNCYDLIK 200 (209)
T ss_pred CHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHh
Confidence 99999986 468999999999999999999999999996 566788898887765 5555543 456677765433
No 36
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.93 E-value=1e-26 Score=259.24 Aligned_cols=231 Identities=29% Similarity=0.334 Sum_probs=166.7
Q ss_pred chHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCC----------
Q 011309 10 SGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQ---------- 79 (489)
Q Consensus 10 s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~---------- 79 (489)
..+++|.|++.|.+++|+.++.+|.+.+.....+ .||||.|+..++..+|++++++|++++..+..|+
T Consensus 374 ~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~g--vTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g 451 (1143)
T KOG4177|consen 374 GFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNG--VTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKG 451 (1143)
T ss_pred CCcchhhhcccCchhHHHhhhhccCCcccCCCCC--cceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcc
Confidence 3568888999999999998888888877666555 7888888888888888888888888777776222
Q ss_pred --------------cccccCCCCChHHHHHHHcCCHHHHHHHHHccC---CCCCccccccccccccCCchhhhhhhhhhh
Q 011309 80 --------------VTRADYLSGRTALHFAAVNGHVRCIRLVVADFV---PSVPFEVMNTQIEGDRGDGSSVKSKCDQSA 142 (489)
Q Consensus 80 --------------i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 142 (489)
........|.||||+|+..||.++++.|++... .......+.++++...+........ ..
T Consensus 452 ~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l---~~ 528 (1143)
T KOG4177|consen 452 RYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKIL---LE 528 (1143)
T ss_pred cHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHH---hh
Confidence 001112245555555555555555555554331 1112222233332222222222211 12
Q ss_pred hhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 011309 143 LSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGAS 222 (489)
Q Consensus 143 ~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gad 222 (489)
-+..++.++..|.||||.|+.+|+.++|++||++|++++.+++. |+||||.|+..|+.+|+++|+++||+
T Consensus 529 ~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~----------G~TPLH~Aa~~G~~~i~~LLlk~GA~ 598 (1143)
T KOG4177|consen 529 HGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKL----------GYTPLHQAAQQGHNDIAELLLKHGAS 598 (1143)
T ss_pred cCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCC----------CCChhhHHHHcChHHHHHHHHHcCCC
Confidence 23457888889999999999999999999999999999999965 99999999999999999999999999
Q ss_pred CCccCCCCCcHHHHHHHcCcHhHHHHhcCCCCC
Q 011309 223 RMSLNCNGWLPLDVARMWGRHWLEPLLAPSSDA 255 (489)
Q Consensus 223 vn~~d~~G~TpL~~A~~~g~~~i~~LL~~~~~~ 255 (489)
+|..|.+|.|||++|+..|+.+++++|......
T Consensus 599 vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 599 VNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred CCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 999999999999999999999998888665544
No 37
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.93 E-value=3.2e-26 Score=255.28 Aligned_cols=253 Identities=30% Similarity=0.320 Sum_probs=170.0
Q ss_pred CCchHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCC--------
Q 011309 8 SASGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQ-------- 79 (489)
Q Consensus 8 s~s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~-------- 79 (489)
.+..+|||.|+..|+.+++.+|...++........+ .||+|+|+..|..+++++|+++|+++|..+..|-
T Consensus 339 ~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~--~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~ 416 (1143)
T KOG4177|consen 339 TAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKG--FTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAH 416 (1143)
T ss_pred cCCcccccHhhhhhhHHHHHHhhccccccCcccccC--CcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhh
Confidence 345689999999999998888888887766555544 9999999999999999999999999999988332
Q ss_pred ---------------cccccCCCCChHHHHHHHcC-CHHHHHHHHHccCC---CCCccccccccccccCCchhhhhhhhh
Q 011309 80 ---------------VTRADYLSGRTALHFAAVNG-HVRCIRLVVADFVP---SVPFEVMNTQIEGDRGDGSSVKSKCDQ 140 (489)
Q Consensus 80 ---------------i~~~d~~~G~TpLh~Aa~~g-~~~~vk~LL~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~ 140 (489)
........|.||+|+|+..| ..++...+++.+.+ ....+.++++++...+.......+.+.
T Consensus 417 ~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~ 496 (1143)
T KOG4177|consen 417 YGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEG 496 (1143)
T ss_pred ccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhc
Confidence 00111223444444444444 44444444433222 122334444444444444443333222
Q ss_pred hhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 011309 141 SALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRG 220 (489)
Q Consensus 141 ~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~G 220 (489)
+ ..++...+.|.|+||+|+..++..+++.|+++|++++.++.. |.||||+|+..|++++||+||++|
T Consensus 497 ~---~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r----------~~TpLh~A~~~g~v~~VkfLLe~g 563 (1143)
T KOG4177|consen 497 G---ANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGR----------GYTPLHVAVHYGNVDLVKFLLEHG 563 (1143)
T ss_pred C---CccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhccc----------ccchHHHHHhcCCchHHHHhhhCC
Confidence 2 223344445555555555555555555555555555555544 999999999999999999999999
Q ss_pred CCCCccCCCCCcHHHHHHHcCcHhHHHHhcCC-CCCCCCCCCCCCCcchhhHHHHHHHHHcCCc
Q 011309 221 ASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS-SDAVMPRFHPSNYLSLPLLSVLNVARECGLL 283 (489)
Q Consensus 221 advn~~d~~G~TpL~~A~~~g~~~i~~LL~~~-~~~~~~~~~~~~~~~~pl~~~l~~a~~~G~~ 283 (489)
||++.+++.|+||||.|+..|+.+++.||.++ +.++.. +..+.+|+ .++..+|..
T Consensus 564 Adv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~----d~~g~TpL----~iA~~lg~~ 619 (1143)
T KOG4177|consen 564 ADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAA----DLDGFTPL----HIAVRLGYL 619 (1143)
T ss_pred ccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcc----cccCcchh----HHHHHhccc
Confidence 99999999999999999999999998888665 555554 34455663 344445543
No 38
>PHA02917 ankyrin-like protein; Provisional
Probab=99.92 E-value=5.7e-24 Score=233.59 Aligned_cols=189 Identities=12% Similarity=0.025 Sum_probs=141.3
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHc---CCHHHHHHHHHccCCCC---CccccccccccccCCc
Q 011309 58 NEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVN---GHVRCIRLVVADFVPSV---PFEVMNTQIEGDRGDG 131 (489)
Q Consensus 58 ~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~---g~~~~vk~LL~~~~~~~---~~~~~~l~~~~~~~~~ 131 (489)
++.|+.|+..|+.++.+|. +|+||||+|+.. |+.++|++|++.+++.. ..+.++++.+...+..
T Consensus 12 ~~~~~~l~~~~~~~~~~d~----------~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~ 81 (661)
T PHA02917 12 LDELKQMLRDRDPNDTRNQ----------FKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHV 81 (661)
T ss_pred HHHHHHHHhccCcccccCC----------CCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCh
Confidence 5788999999999998888 999999997555 88999999999887654 3456788877777654
Q ss_pred hhhhhhhhhh-hhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHH--HcC
Q 011309 132 SSVKSKCDQS-ALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAA--CGG 208 (489)
Q Consensus 132 ~~~~~~~~~~-~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa--~~g 208 (489)
.......... ......|..+ ..+++|+|+.+|+.++|++|+++|++++..+.. |.||||+|+ ..|
T Consensus 82 ~v~~~~~~~Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~----------g~T~L~~~~a~~~~ 149 (661)
T PHA02917 82 KVNKDIAMALLEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCEN----------HRSVIENYVMTDDP 149 (661)
T ss_pred hHHHHHHHHHHhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCC----------CccHHHHHHHccCC
Confidence 3322111100 0001133333 237788899999999999999999999999977 999999654 578
Q ss_pred CHHHHHHHHHcCCCCCccCC---CC-----------CcHHHHHHH-----------cCcHhHHHHhc-CCCCCCCCCCCC
Q 011309 209 NLKCCQVLLSRGASRMSLNC---NG-----------WLPLDVARM-----------WGRHWLEPLLA-PSSDAVMPRFHP 262 (489)
Q Consensus 209 ~~eivk~LL~~Gadvn~~d~---~G-----------~TpL~~A~~-----------~g~~~i~~LL~-~~~~~~~~~~~~ 262 (489)
+.++|++|+++||+++..|. .| +||||+|+. .++.+++++|. .+++++..
T Consensus 150 ~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~---- 225 (661)
T PHA02917 150 VPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSI---- 225 (661)
T ss_pred CHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccC----
Confidence 99999999999999987654 34 599999986 45778888776 46666554
Q ss_pred CCCcchhhHH
Q 011309 263 SNYLSLPLLS 272 (489)
Q Consensus 263 ~~~~~~pl~~ 272 (489)
+..+.+|++.
T Consensus 226 d~~G~TpLh~ 235 (661)
T PHA02917 226 DKNYCTALQY 235 (661)
T ss_pred CCCCCcHHHH
Confidence 4556677553
No 39
>PHA02730 ankyrin-like protein; Provisional
Probab=99.92 E-value=8.2e-24 Score=228.01 Aligned_cols=238 Identities=10% Similarity=0.056 Sum_probs=166.4
Q ss_pred chHHHHHHHHcCCHHHHHHHhhcCCCCccc-------CCCCCCchHHHHHH------HhCcHHHHHHHHHcCCCCCCcCC
Q 011309 10 SGERLVSAARDGDFVEAKMLLDCNPCLAKY-------STFGGLNSPLHFAA------AKGHNEIVALLLENGADVNSRNY 76 (489)
Q Consensus 10 s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~-------~~~~~g~TpLh~Aa------~~G~~eivk~LLe~Gad~n~~d~ 76 (489)
+-+|++.|...+++++|++|++.|++++-+ +... ..|.||+++ ..++.|++++||++||++|.+|.
T Consensus 155 ~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~-c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~ 233 (672)
T PHA02730 155 GLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDR-CKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDE 233 (672)
T ss_pred chhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCc-cchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCC
Confidence 457999999999999999999999998522 2222 246666443 55789999999999999999998
Q ss_pred CCCcccccCCCCChHHHH--HHHcCCHHHHHHHHH--------------------------------ccCCCCC-----c
Q 011309 77 CGQVTRADYLSGRTALHF--AAVNGHVRCIRLVVA--------------------------------DFVPSVP-----F 117 (489)
Q Consensus 77 ~g~i~~~d~~~G~TpLh~--Aa~~g~~~~vk~LL~--------------------------------~~~~~~~-----~ 117 (489)
.|.||||+ |...|+.++|++|++ .+.+... .
T Consensus 234 ----------~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 303 (672)
T PHA02730 234 ----------GGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIE 303 (672)
T ss_pred ----------CCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhh
Confidence 99999995 555678999999998 1111100 0
Q ss_pred cccc---ccc----ccccCCc----------------h----hhhhhhh------------hhhhhhhhccccCCCccHH
Q 011309 118 EVMN---TQI----EGDRGDG----------------S----SVKSKCD------------QSALSKFVNKAADGGITAL 158 (489)
Q Consensus 118 ~~~~---l~~----~~~~~~~----------------~----~~~~~~~------------~~~~~~~in~~d~~G~TpL 158 (489)
+... ... .-..+.. . .+..+.. ...-+..+|.. ..|.|||
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpL 382 (672)
T PHA02730 304 GRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPL 382 (672)
T ss_pred ccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHH
Confidence 0000 000 0001100 0 0000000 01123346764 7899999
Q ss_pred HHHHHcCC----HHHHHHHHhcCC--CcccccccCCCccccCCCCCcHHHH---HHHcC---------CHHHHHHHHHcC
Q 011309 159 HMAALNGY----FDCVQLLLDLHA--NVSAVTFHYGTSMDLIGAGSTPLHF---AACGG---------NLKCCQVLLSRG 220 (489)
Q Consensus 159 h~Aa~~g~----~e~v~~LL~~Ga--dvn~~~~~~~~~~~~~~~G~TpLh~---Aa~~g---------~~eivk~LL~~G 220 (489)
|+|+..+. .+++++|+++|+ +++..+.. |.||||. |...+ ..+++++|+.+|
T Consensus 383 H~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~----------G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~G 452 (672)
T PHA02730 383 HDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNN----------GRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYM 452 (672)
T ss_pred HHHHHHcCCcchHHHHHHHHHcCCCccccccccC----------CCchHhHHHHHHhccccccccchhHHHHHHHHHhcc
Confidence 99998875 899999999998 68888766 9999994 33332 236799999999
Q ss_pred CCCCccCCCCCcHHHHHHHcCcHhHHHHhcCC-CCCCCCCCCCCCCcchhhHH
Q 011309 221 ASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS-SDAVMPRFHPSNYLSLPLLS 272 (489)
Q Consensus 221 advn~~d~~G~TpL~~A~~~g~~~i~~LL~~~-~~~~~~~~~~~~~~~~pl~~ 272 (489)
||+|++|..|+||||+|+..++.+++++|... ++++..+. ..+.+|++.
T Consensus 453 ADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~---~~g~TaL~~ 502 (672)
T PHA02730 453 DDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSR---SIINTAIQK 502 (672)
T ss_pred cchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCC---cCCcCHHHH
Confidence 99999999999999999999999988777664 55554432 235677653
No 40
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.92 E-value=1.5e-23 Score=237.46 Aligned_cols=159 Identities=24% Similarity=0.233 Sum_probs=145.0
Q ss_pred CchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCcccccccc
Q 011309 45 LNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQI 124 (489)
Q Consensus 45 g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~ 124 (489)
+.++||.||..|+.++++.|+++|+|+|..|. .|+||||+|+.+|+.+++++|++.+.+
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~----------~G~TpLh~Aa~~g~~~~v~~Ll~~gad----------- 583 (823)
T PLN03192 525 MASNLLTVASTGNAALLEELLKAKLDPDIGDS----------KGRTPLHIAASKGYEDCVLVLLKHACN----------- 583 (823)
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCCCCCCCC----------CCCCHHHHHHHcChHHHHHHHHhcCCC-----------
Confidence 37999999999999999999999999999998 999999999999999999999987644
Q ss_pred ccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHH
Q 011309 125 EGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFA 204 (489)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~A 204 (489)
+|.+|.+|.||||+|+..|+.+++++|++.++..+..+ |.++||+|
T Consensus 584 ----------------------in~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~------------~~~~L~~A 629 (823)
T PLN03192 584 ----------------------VHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHA------------AGDLLCTA 629 (823)
T ss_pred ----------------------CCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCccc------------CchHHHHH
Confidence 78889999999999999999999999999887765433 77999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhcC-CCCCCCC
Q 011309 205 ACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAP-SSDAVMP 258 (489)
Q Consensus 205 a~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~~-~~~~~~~ 258 (489)
+..|+.+++++|+++|+|+|.+|.+|+||||+|+..|+.+++++|.. +++++..
T Consensus 630 a~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~ 684 (823)
T PLN03192 630 AKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKA 684 (823)
T ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999999999999999999999999888765 4555444
No 41
>PHA02792 ankyrin-like protein; Provisional
Probab=99.91 E-value=1e-23 Score=225.05 Aligned_cols=250 Identities=14% Similarity=0.022 Sum_probs=183.4
Q ss_pred HHHH-HHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHH-hCcHHHHHHHHHcCCCCCCcCCCCC----------
Q 011309 12 ERLV-SAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAA-KGHNEIVALLLENGADVNSRNYCGQ---------- 79 (489)
Q Consensus 12 t~L~-~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~-~G~~eivk~LLe~Gad~n~~d~~g~---------- 79 (489)
++|| .|...|++++|++|+++|++++..... +.||||+|+. .|+.|+|++||++|||++..+..|-
T Consensus 73 ~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~--~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~ 150 (631)
T PHA02792 73 DIFEYLCSDNIDIELLKLLISKGLEINSIKNG--INIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRA 150 (631)
T ss_pred cHHHHHHHhcccHHHHHHHHHcCCCcccccCC--CCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccc
Confidence 3554 456789999999999999999977654 4899999976 6999999999999999766544333
Q ss_pred ----------------cccccCCCCChHHHHHHHcC-------CHHHHHHHHHccCCC---CCccccccccccccC--Cc
Q 011309 80 ----------------VTRADYLSGRTALHFAAVNG-------HVRCIRLVVADFVPS---VPFEVMNTQIEGDRG--DG 131 (489)
Q Consensus 80 ----------------i~~~d~~~G~TpLh~Aa~~g-------~~~~vk~LL~~~~~~---~~~~~~~l~~~~~~~--~~ 131 (489)
..-.++..|.||||+|+.++ +.++++.|+++++.. +..+.++++.+.... ..
T Consensus 151 ~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ 230 (631)
T PHA02792 151 EYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKR 230 (631)
T ss_pred cccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchH
Confidence 22356678999999999999 899999999987644 344556666555444 11
Q ss_pred hhhhhhhhhh----------------hh-----------------------------------------hh---------
Q 011309 132 SSVKSKCDQS----------------AL-----------------------------------------SK--------- 145 (489)
Q Consensus 132 ~~~~~~~~~~----------------~~-----------------------------------------~~--------- 145 (489)
..++.+.... .+ .+
T Consensus 231 ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l 310 (631)
T PHA02792 231 EIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLL 310 (631)
T ss_pred HHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHH
Confidence 1111110000 00 00
Q ss_pred ----------------h----hccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHH
Q 011309 146 ----------------F----VNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAA 205 (489)
Q Consensus 146 ----------------~----in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa 205 (489)
. .+.........++.|+..|+.++|++|+++||+++..+.. +.+.||||+|.
T Consensus 311 ~~Yl~~~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~--------g~~~TpLh~A~ 382 (631)
T PHA02792 311 SEYVSYHTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDN--------IINIMPLFPTL 382 (631)
T ss_pred HHHHhcCCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCC--------CCChhHHHHHH
Confidence 0 1111112456789999999999999999999999998865 22579999988
Q ss_pred HcCCH---HHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhcCC-CCCCCCCCCCCCCcchhhHHHHH
Q 011309 206 CGGNL---KCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS-SDAVMPRFHPSNYLSLPLLSVLN 275 (489)
Q Consensus 206 ~~g~~---eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~~~-~~~~~~~~~~~~~~~~pl~~~l~ 275 (489)
..... +++++|+++|||+|.+|..|+||||+|+..++.+++++|... ++++.. +..+.+|+..+..
T Consensus 383 ~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~k----D~~G~TpL~~A~~ 452 (631)
T PHA02792 383 SIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINIT----TKYGSTCIGICVI 452 (631)
T ss_pred HhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCc----CCCCCCHHHHHHH
Confidence 77664 468999999999999999999999999999999998877665 444443 5566777766544
No 42
>PHA02730 ankyrin-like protein; Provisional
Probab=99.91 E-value=6.9e-24 Score=228.58 Aligned_cols=195 Identities=17% Similarity=0.141 Sum_probs=138.9
Q ss_pred hHHHHHHHHcC---CHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhC--cHHHHHHHHHcCC--CCCCcCCCCCcccc
Q 011309 11 GERLVSAARDG---DFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKG--HNEIVALLLENGA--DVNSRNYCGQVTRA 83 (489)
Q Consensus 11 ~t~L~~Aa~~G---~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G--~~eivk~LLe~Ga--d~n~~d~~g~i~~~ 83 (489)
.||||+|+..| +.++|++||++|++++..+..| +||||+|+..| +.|+|++|+++|+ +++..+.
T Consensus 42 ~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G--~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~------- 112 (672)
T PHA02730 42 NNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEG--LTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSN------- 112 (672)
T ss_pred CcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCC--CChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccc-------
Confidence 46777777776 4777777777777777665544 77777777755 6777777777754 3465554
Q ss_pred cCCCCChHHHHHHH--cCCHHHHHHHHHcc-CCCCCccccccccccccCCchhhhhhhhhhhhhhhhcccc-CCCccHHH
Q 011309 84 DYLSGRTALHFAAV--NGHVRCIRLVVADF-VPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAA-DGGITALH 159 (489)
Q Consensus 84 d~~~G~TpLh~Aa~--~g~~~~vk~LL~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d-~~G~TpLh 159 (489)
.+.+|||.++. +++.++|++|+..+ .+. ....+..+ ..|.+|++
T Consensus 113 ---~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~-----------------------------~~~~~~~~~~~~~~~~y 160 (672)
T PHA02730 113 ---INDFDLYSYMSSDNIDLRLLKYLIVDKRIRP-----------------------------SKNTNYYIHCLGLVDIY 160 (672)
T ss_pred ---cCCchHHHHHHhcCCcHHHHHHHHHhcCCCh-----------------------------hhhhhhhccccchhhhh
Confidence 56777777777 77777777777422 110 01122223 37899999
Q ss_pred HHHHcCCHHHHHHHHhcCCCcccccc---cCCCccccCCCCCcHHHHH------HHcCCHHHHHHHHHcCCCCCccCCCC
Q 011309 160 MAALNGYFDCVQLLLDLHANVSAVTF---HYGTSMDLIGAGSTPLHFA------ACGGNLKCCQVLLSRGASRMSLNCNG 230 (489)
Q Consensus 160 ~Aa~~g~~e~v~~LL~~Gadvn~~~~---~~~~~~~~~~~G~TpLh~A------a~~g~~eivk~LL~~Gadvn~~d~~G 230 (489)
+|+..++.++|++|+++|++++.... .+.++ ...|.||++ ...++.|++++|+++|||+|.+|.+|
T Consensus 161 l~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~-----~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G 235 (672)
T PHA02730 161 VTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSD-----RCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGG 235 (672)
T ss_pred HhcCCCchHHHHHHHHcCCcccccccccccccCC-----ccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCC
Confidence 99999999999999999999963210 01111 134566644 35578999999999999999999999
Q ss_pred CcHHHH--HHHcCcHhHHHHhcC
Q 011309 231 WLPLDV--ARMWGRHWLEPLLAP 251 (489)
Q Consensus 231 ~TpL~~--A~~~g~~~i~~LL~~ 251 (489)
+||||+ |...|+.+++++|..
T Consensus 236 ~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 236 SLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred CCHHHHHHHcCcccHHHHHHHHh
Confidence 999996 545677999999988
No 43
>PHA02795 ankyrin-like protein; Provisional
Probab=99.91 E-value=6.7e-24 Score=219.10 Aligned_cols=168 Identities=21% Similarity=0.190 Sum_probs=145.5
Q ss_pred chHHHHHHHH--cCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCC
Q 011309 10 SGERLVSAAR--DGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLS 87 (489)
Q Consensus 10 s~t~L~~Aa~--~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~ 87 (489)
..|+||.|+. .|++++|++||++|++++.. ++ .||||.|+..|+.++|++|+++|++.+.... .. .....
T Consensus 116 ~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~--~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~---~~-l~~~~ 187 (437)
T PHA02795 116 VQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--EC--LNAYFRGICKKESSVVEFILNCGIPDENDVK---LD-LYKII 187 (437)
T ss_pred ccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CC--CCHHHHHHHcCcHHHHHHHHhcCCccccccc---ch-hhhhh
Confidence 4689999999 99999999999999999763 22 7999999999999999999999985432221 00 00124
Q ss_pred CChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCH
Q 011309 88 GRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYF 167 (489)
Q Consensus 88 G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~ 167 (489)
|.|++|.|+..++.+++++|++.+++ +|.+|..|.||||+|+..|+.
T Consensus 188 ~~t~l~~a~~~~~~eIve~LIs~GAD---------------------------------IN~kD~~G~TpLh~Aa~~g~~ 234 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCIPYIED---------------------------------INQLDAGGRTLLYRAIYAGYI 234 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHHhCcCC---------------------------------cCcCCCCCCCHHHHHHHcCCH
Confidence 78999999999999999999988755 899999999999999999999
Q ss_pred HHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCC--------HHHHHHHHHcCCCCCccCC
Q 011309 168 DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGN--------LKCCQVLLSRGASRMSLNC 228 (489)
Q Consensus 168 e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~--------~eivk~LL~~Gadvn~~d~ 228 (489)
++|++|+++|++++.++.. |.||||+|+..|+ .+++++|+++|++++..+.
T Consensus 235 eiVelLL~~GAdIN~~d~~----------G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~ 293 (437)
T PHA02795 235 DLVSWLLENGANVNAVMSN----------GYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKL 293 (437)
T ss_pred HHHHHHHHCCCCCCCcCCC----------CCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhH
Confidence 9999999999999999976 9999999999984 6999999999999987543
No 44
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.90 E-value=1.7e-24 Score=198.20 Aligned_cols=190 Identities=26% Similarity=0.211 Sum_probs=153.3
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHH
Q 011309 13 RLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTAL 92 (489)
Q Consensus 13 ~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpL 92 (489)
-+-.|.+.|+.++++.++.-.++-....... |+++++.|+-.|+...+..+|.+|+..|..+. -+++|+
T Consensus 65 ~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~-g~~~~~v~ap~~s~~k~sttltN~~rgnevs~----------~p~s~~ 133 (296)
T KOG0502|consen 65 LLTVAVRSGNSDVAVQSAQLDPDAIDETDPE-GWSALLVAAPCGSVDKVSTTLTNGARGNEVSL----------MPWSPL 133 (296)
T ss_pred ccchhhhcCCcHHHHHhhccCCCCCCCCCch-hhhhhhhcCCCCCcceeeeeecccccCCcccc----------ccCChh
Confidence 3667788888888888887766654444333 58899999888888888888888888888887 888888
Q ss_pred HHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHH
Q 011309 93 HFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQL 172 (489)
Q Consensus 93 h~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~ 172 (489)
.+++...|.+++..|.++ .+|..|..|.|||+||+.+|++.+|++
T Consensus 134 slsVhql~L~~~~~~~~n-----------------------------------~VN~~De~GfTpLiWAaa~G~i~vV~f 178 (296)
T KOG0502|consen 134 SLSVHQLHLDVVDLLVNN-----------------------------------KVNACDEFGFTPLIWAAAKGHIPVVQF 178 (296)
T ss_pred hHHHHHHHHHHHHHHhhc-----------------------------------cccCccccCchHhHHHHhcCchHHHHH
Confidence 888888888888777743 278888888888888888888888888
Q ss_pred HHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHh-cC
Q 011309 173 LLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLL-AP 251 (489)
Q Consensus 173 LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL-~~ 251 (489)
||+.|||++...+. ..|+|.+|..+|.++||++||.++.|+|..|-+|-|||-||++-+|.++++.| ..
T Consensus 179 LL~~GAdp~~lgk~----------resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~s 248 (296)
T KOG0502|consen 179 LLNSGADPDALGKY----------RESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNS 248 (296)
T ss_pred HHHcCCChhhhhhh----------hhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhc
Confidence 88888888888765 77888888888888888888888888888888888888888888888876544 55
Q ss_pred CCCCCCC
Q 011309 252 SSDAVMP 258 (489)
Q Consensus 252 ~~~~~~~ 258 (489)
+++++..
T Consensus 249 GAd~t~e 255 (296)
T KOG0502|consen 249 GADVTQE 255 (296)
T ss_pred CCCcccc
Confidence 5665554
No 45
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.90 E-value=1.3e-23 Score=214.45 Aligned_cols=205 Identities=29% Similarity=0.378 Sum_probs=165.8
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHH
Q 011309 13 RLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTAL 92 (489)
Q Consensus 13 ~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpL 92 (489)
.|..|+..|+.+.|..||..|++++....++ .|+||-++...+.+||++|+++|++||..|. .|||||
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~Dg--lTalhq~~id~~~e~v~~l~e~ga~Vn~~d~----------e~wtPl 110 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDG--LTALHQACIDDNLEMVKFLVENGANVNAQDN----------EGWTPL 110 (527)
T ss_pred HHHhccccccHHHHHHHhccCCCccccCCcc--chhHHHHHhcccHHHHHHHHHhcCCcccccc----------ccCCcc
Confidence 5888999999999999999999887777666 9999999999999999999999999999998 999999
Q ss_pred HHHHHcCCHHHHHHHHHccCCCCCcc---ccccccccccCCchhh-----------hhhh------------hhhhhhhh
Q 011309 93 HFAAVNGHVRCIRLVVADFVPSVPFE---VMNTQIEGDRGDGSSV-----------KSKC------------DQSALSKF 146 (489)
Q Consensus 93 h~Aa~~g~~~~vk~LL~~~~~~~~~~---~~~l~~~~~~~~~~~~-----------~~~~------------~~~~~~~~ 146 (489)
|.|+.-||..++++|++.++.....+ ..+..+.........+ ..-. .....+..
T Consensus 111 haaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~ 190 (527)
T KOG0505|consen 111 HAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAE 190 (527)
T ss_pred hhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcccc
Confidence 99999999999999998766433221 1111111111100000 0000 00011223
Q ss_pred hccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcc
Q 011309 147 VNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSL 226 (489)
Q Consensus 147 in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~ 226 (489)
.+.++..|.|+||.|+.+|..++.++|+++|.+++.+|.. |+||||.|+.+|..+++++|+++|++.+..
T Consensus 191 ~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~d----------gWtPlHAAA~Wg~~~~~elL~~~ga~~d~~ 260 (527)
T KOG0505|consen 191 LDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYD----------GWTPLHAAAHWGQEDACELLVEHGADMDAK 260 (527)
T ss_pred ccccccccchHHHHHHhhhHHHHHHHHHHhccCccccccc----------CCCcccHHHHhhhHhHHHHHHHhhcccchh
Confidence 5666667999999999999999999999999999999987 999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHH
Q 011309 227 NCNGWLPLDVARM 239 (489)
Q Consensus 227 d~~G~TpL~~A~~ 239 (489)
...|.||+.+|..
T Consensus 261 t~~g~~p~dv~de 273 (527)
T KOG0505|consen 261 TKMGETPLDVADE 273 (527)
T ss_pred hhcCCCCccchhh
Confidence 9999999999975
No 46
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.90 E-value=4.8e-23 Score=231.37 Aligned_cols=197 Identities=24% Similarity=0.247 Sum_probs=145.8
Q ss_pred CchHHHHHHHHcCCHHHHHHHhhc--CCCCcccCCCCCCchHHH-HHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccC
Q 011309 9 ASGERLVSAARDGDFVEAKMLLDC--NPCLAKYSTFGGLNSPLH-FAAAKGHNEIVALLLENGADVNSRNYCGQVTRADY 85 (489)
Q Consensus 9 ~s~t~L~~Aa~~G~~~~Vk~LL~~--g~~l~~~~~~~~g~TpLh-~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~ 85 (489)
..+++|+.||+.|+++.|+.+++. +.+++..+.. |+|||| .|+.+++.+++++|+++|+ .+.
T Consensus 16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~--G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~--------- 80 (743)
T TIGR00870 16 DEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRL--GRSALFVAAIENENLELTELLLNLSC----RGA--------- 80 (743)
T ss_pred HHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCcc--chhHHHHHHHhcChHHHHHHHHhCCC----CCC---------
Confidence 446799999999999999999999 6666554444 499999 8889999999999999987 444
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcC
Q 011309 86 LSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNG 165 (489)
Q Consensus 86 ~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g 165 (489)
.|.||||+|+.. +.+.++.++.......... ... ..........+..|.||||+|+.+|
T Consensus 81 -~G~T~Lh~A~~~-~~~~v~~ll~~l~~~~~~~----------~~~---------~~~~~~~~~~~~~G~TpLhlAa~~~ 139 (743)
T TIGR00870 81 -VGDTLLHAISLE-YVDAVEAILLHLLAAFRKS----------GPL---------ELANDQYTSEFTPGITALHLAAHRQ 139 (743)
T ss_pred -cChHHHHHHHhc-cHHHHHHHHHHHhhccccc----------Cch---------hhhccccccccCCCCcHHHHHHHhC
Confidence 799999999873 3333333332111000000 000 0000001223457999999999999
Q ss_pred CHHHHHHHHhcCCCcccccccCCC----ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcC
Q 011309 166 YFDCVQLLLDLHANVSAVTFHYGT----SMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWG 241 (489)
Q Consensus 166 ~~e~v~~LL~~Gadvn~~~~~~~~----~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g 241 (489)
+.++|++|+++|++++..+..... ..+....|.||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..+
T Consensus 140 ~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 140 NYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMEN 219 (743)
T ss_pred CHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhh
Confidence 999999999999999975421100 0011235899999999999999999999999999999999999999999987
No 47
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.90 E-value=1.1e-23 Score=205.36 Aligned_cols=158 Identities=28% Similarity=0.321 Sum_probs=139.1
Q ss_pred CCCCchHHHHHHHhCcHHHHHHHHHcC-CCCCCcCCCCCcccccCCCCChHHHHHHHcC-----CHHHHHHHHHccCCCC
Q 011309 42 FGGLNSPLHFAAAKGHNEIVALLLENG-ADVNSRNYCGQVTRADYLSGRTALHFAAVNG-----HVRCIRLVVADFVPSV 115 (489)
Q Consensus 42 ~~~g~TpLh~Aa~~G~~eivk~LLe~G-ad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g-----~~~~vk~LL~~~~~~~ 115 (489)
+.+|+|+||||+.+++++||+.||+.| .++|..|+ .|.||+++|+... +.++|..|..-+
T Consensus 265 DsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNr----------AGYtpiMLaALA~lk~~~d~~vV~~LF~mg---- 330 (452)
T KOG0514|consen 265 DSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNR----------AGYTPVMLAALAKLKQPADRTVVERLFKMG---- 330 (452)
T ss_pred cCCCCeeeeeeecccchHHHHHHhccCccccccccc----------ccccHHHHHHHHhhcchhhHHHHHHHHhcc----
Confidence 445599999999999999999999998 79999998 9999999998643 456677666432
Q ss_pred CccccccccccccCCchhhhhhhhhhhhhhhhcccc-CCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccC
Q 011309 116 PFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAA-DGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLI 194 (489)
Q Consensus 116 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d-~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~ 194 (489)
.||.+. ..|+|+||+|+.+|+.++|+.||..|||||.+|.+
T Consensus 331 ------------------------------nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdD-------- 372 (452)
T KOG0514|consen 331 ------------------------------DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDD-------- 372 (452)
T ss_pred ------------------------------CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCC--------
Confidence 155554 58999999999999999999999999999999987
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHcCcHhHHHHhcCCC
Q 011309 195 GAGSTPLHFAACGGNLKCCQVLLSR-GASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSS 253 (489)
Q Consensus 195 ~~G~TpLh~Aa~~g~~eivk~LL~~-Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~~~~ 253 (489)
|.|+||.|+++|+.|||++||.. +.|+...|.+|-|+|.+|...|+.+|..+|..+-
T Consensus 373 --GSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~~ 430 (452)
T KOG0514|consen 373 --GSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAHM 430 (452)
T ss_pred --ccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHHH
Confidence 99999999999999999999975 8899999999999999999999999988885543
No 48
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.89 E-value=1.5e-23 Score=191.93 Aligned_cols=189 Identities=26% Similarity=0.379 Sum_probs=170.2
Q ss_pred HHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChH
Q 011309 12 ERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTA 91 (489)
Q Consensus 12 t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~Tp 91 (489)
..++.|+-.|+.+.+..+|..+...+..+..+ ++|+++++..-|++++..|.++ .+|..|. .|.||
T Consensus 98 ~~~~v~ap~~s~~k~sttltN~~rgnevs~~p--~s~~slsVhql~L~~~~~~~~n--~VN~~De----------~GfTp 163 (296)
T KOG0502|consen 98 SALLVAAPCGSVDKVSTTLTNGARGNEVSLMP--WSPLSLSVHQLHLDVVDLLVNN--KVNACDE----------FGFTP 163 (296)
T ss_pred hhhhhcCCCCCcceeeeeecccccCCcccccc--CChhhHHHHHHHHHHHHHHhhc--cccCccc----------cCchH
Confidence 45999999999999999999999999888877 9999999999999998888775 5677777 99999
Q ss_pred HHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHH
Q 011309 92 LHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQ 171 (489)
Q Consensus 92 Lh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~ 171 (489)
|.||+.+||+.+|++||+.|++ ++...++..|+|++|...|..++|+
T Consensus 164 LiWAaa~G~i~vV~fLL~~GAd---------------------------------p~~lgk~resALsLAt~ggytdiV~ 210 (296)
T KOG0502|consen 164 LIWAAAKGHIPVVQFLLNSGAD---------------------------------PDALGKYRESALSLATRGGYTDIVE 210 (296)
T ss_pred hHHHHhcCchHHHHHHHHcCCC---------------------------------hhhhhhhhhhhHhHHhcCChHHHHH
Confidence 9999999999999999988765 4555567889999999999999999
Q ss_pred HHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhcC
Q 011309 172 LLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAP 251 (489)
Q Consensus 172 ~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~~ 251 (489)
+||+.+.|||..|.+ |-|||.||++.|+.+||+.||+.|||++..+..|++++.+|+..|+..+.+.|.+
T Consensus 211 lLL~r~vdVNvyDwN----------GgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr~Vqqvie~ 280 (296)
T KOG0502|consen 211 LLLTREVDVNVYDWN----------GGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYRIVQQVIEK 280 (296)
T ss_pred HHHhcCCCcceeccC----------CCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhHHHHHHHHH
Confidence 999999999999988 8999999999999999999999999999999999999999999999976666666
Q ss_pred CCCCCC
Q 011309 252 SSDAVM 257 (489)
Q Consensus 252 ~~~~~~ 257 (489)
+.....
T Consensus 281 h~lkl~ 286 (296)
T KOG0502|consen 281 HALKLC 286 (296)
T ss_pred HHHHHh
Confidence 555433
No 49
>PHA02792 ankyrin-like protein; Provisional
Probab=99.88 E-value=3.7e-22 Score=213.27 Aligned_cols=207 Identities=12% Similarity=0.029 Sum_probs=154.4
Q ss_pred chHHHHHHHH-cCCHHHHHHHhhcCCCCccc----------------------------------CCCCCCchHHHHHHH
Q 011309 10 SGERLVSAAR-DGDFVEAKMLLDCNPCLAKY----------------------------------STFGGLNSPLHFAAA 54 (489)
Q Consensus 10 s~t~L~~Aa~-~G~~~~Vk~LL~~g~~l~~~----------------------------------~~~~~g~TpLh~Aa~ 54 (489)
..++||+|+. .|++++|++||+.|++.... -++..|.||||+|+.
T Consensus 105 ~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~ 184 (631)
T PHA02792 105 INIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYII 184 (631)
T ss_pred CCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHh
Confidence 3468899966 69999999999999873210 111236899999999
Q ss_pred hC-------cHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcC--CHHHHHHHHHccC-------------
Q 011309 55 KG-------HNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNG--HVRCIRLVVADFV------------- 112 (489)
Q Consensus 55 ~G-------~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g--~~~~vk~LL~~~~------------- 112 (489)
.+ +.|+++.||++|++++..|. .|.||||+|+.+. ..+++++|+....
T Consensus 185 ~~s~~~~~~~~~v~k~Li~~g~~~~~~d~----------~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~ 254 (631)
T PHA02792 185 TRSQDGYATSLDVINYLISHEKEMRYYTY----------REHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYL 254 (631)
T ss_pred hCCcccccCCHHHHHHHHhCCCCcCccCC----------CCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHH
Confidence 99 89999999999999999998 8999999999999 7889999884311
Q ss_pred -----CCC-Ccc----------cc--c----------------------------cc--------------cccc-----
Q 011309 113 -----PSV-PFE----------VM--N----------------------------TQ--------------IEGD----- 127 (489)
Q Consensus 113 -----~~~-~~~----------~~--~----------------------------l~--------------~~~~----- 127 (489)
..+ ... .. . ++ ....
T Consensus 255 ~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~ 334 (631)
T PHA02792 255 RKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATL 334 (631)
T ss_pred HHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCcc
Confidence 000 000 00 0 00 0000
Q ss_pred --------------cCCchhhhhhhhhhhhhhhhccccCCC--ccHHHHHHHcCCH---HHHHHHHhcCCCcccccccCC
Q 011309 128 --------------RGDGSSVKSKCDQSALSKFVNKAADGG--ITALHMAALNGYF---DCVQLLLDLHANVSAVTFHYG 188 (489)
Q Consensus 128 --------------~~~~~~~~~~~~~~~~~~~in~~d~~G--~TpLh~Aa~~g~~---e~v~~LL~~Gadvn~~~~~~~ 188 (489)
.+....++.+ ...+..++.+|..| .||||+|+..... +++++|+++|+++|.+|..
T Consensus 335 ~r~~~~n~~~~Aa~~gn~eIVelL---Is~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~-- 409 (631)
T PHA02792 335 YRFKHINKYFQKFDNRDPKVVEYI---LKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKH-- 409 (631)
T ss_pred ccCCcchHHHHHHHcCCHHHHHHH---HHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcccccccc--
Confidence 0000000000 01123366777664 6999998877654 4689999999999999977
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHH
Q 011309 189 TSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARM 239 (489)
Q Consensus 189 ~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~ 239 (489)
|.||||+|+..++.+++++|+++|++++.+|..|+|||++|+.
T Consensus 410 --------G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 410 --------GRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred --------CcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999986
No 50
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.87 E-value=7.7e-22 Score=181.31 Aligned_cols=133 Identities=21% Similarity=0.264 Sum_probs=112.5
Q ss_pred chHHHHHHHhCcH----HHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHH---HHHHHHccCCCCCcc
Q 011309 46 NSPLHFAAAKGHN----EIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRC---IRLVVADFVPSVPFE 118 (489)
Q Consensus 46 ~TpLh~Aa~~G~~----eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~---vk~LL~~~~~~~~~~ 118 (489)
.++||.|++.|+. +++++|++.|++++.+|. .|+||||+|+.+|+.+. +++|++.+..
T Consensus 21 ~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~----------~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad----- 85 (166)
T PHA02743 21 QNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDH----------HGRQCTHMVAWYDRANAVMKIELLVNMGAD----- 85 (166)
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCC----------CCCcHHHHHHHhCccCHHHHHHHHHHcCCC-----
Confidence 6889999999987 666678888998888887 89999999999888654 7888876543
Q ss_pred ccccccccccCCchhhhhhhhhhhhhhhhcccc-CCCccHHHHHHHcCCHHHHHHHHh-cCCCcccccccCCCccccCCC
Q 011309 119 VMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAA-DGGITALHMAALNGYFDCVQLLLD-LHANVSAVTFHYGTSMDLIGA 196 (489)
Q Consensus 119 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d-~~G~TpLh~Aa~~g~~e~v~~LL~-~Gadvn~~~~~~~~~~~~~~~ 196 (489)
+|.+| ..|.||||+|+..|+.+++++|++ .|++++..+..
T Consensus 86 ----------------------------in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~---------- 127 (166)
T PHA02743 86 ----------------------------INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQ---------- 127 (166)
T ss_pred ----------------------------CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCC----------
Confidence 67777 479999999999999999999995 79999888866
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Q 011309 197 GSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGW 231 (489)
Q Consensus 197 G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~ 231 (489)
|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 128 g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~ 162 (166)
T PHA02743 128 HETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL 162 (166)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence 89999999999999999999999999988887764
No 51
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.87 E-value=2e-22 Score=211.95 Aligned_cols=208 Identities=28% Similarity=0.280 Sum_probs=174.4
Q ss_pred hHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCCh
Q 011309 11 GERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRT 90 (489)
Q Consensus 11 ~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~T 90 (489)
.|.||.|+.+|+.+++++|+++.+-++..+..+ .+|||+|+..|+.++|++||.++..+|..+. .|.|
T Consensus 50 fTalhha~Lng~~~is~llle~ea~ldl~d~kg--~~plhlaaw~g~~e~vkmll~q~d~~na~~~----------e~~t 117 (854)
T KOG0507|consen 50 FTLLHHAVLNGQNQISKLLLDYEALLDLCDTKG--ILPLHLAAWNGNLEIVKMLLLQTDILNAVNI----------ENET 117 (854)
T ss_pred hhHHHHHHhcCchHHHHHHhcchhhhhhhhccC--cceEEehhhcCcchHHHHHHhcccCCCcccc----------cCcC
Confidence 477999999999999999999998888877554 8999999999999999999999988898887 8999
Q ss_pred HHHHHHHcCCHHHHHHHHHccCCC---CCccccccccccccCCchhhhhhhhhhhhhhh-----hccccCCCccHHHHHH
Q 011309 91 ALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSVKSKCDQSALSKF-----VNKAADGGITALHMAA 162 (489)
Q Consensus 91 pLh~Aa~~g~~~~vk~LL~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----in~~d~~G~TpLh~Aa 162 (489)
|||.|+++||.+++.+|+.++.+. +....+.+.++...+....+..++........ -..++-.+.+|||+|+
T Consensus 118 plhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaa 197 (854)
T KOG0507|consen 118 PLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAA 197 (854)
T ss_pred ccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhh
Confidence 999999999999999999876543 44556667777777776666555444211111 2344557889999999
Q ss_pred HcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcC
Q 011309 163 LNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWG 241 (489)
Q Consensus 163 ~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g 241 (489)
++||.++++.|+++|.++|..+.. -|+||.|+..|..++|++||+.|.+..++|.+|+|+|.+-...-
T Consensus 198 kngh~~~~~~ll~ag~din~~t~~-----------gtalheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~ 265 (854)
T KOG0507|consen 198 KNGHVECMQALLEAGFDINYTTED-----------GTALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQ 265 (854)
T ss_pred hcchHHHHHHHHhcCCCccccccc-----------chhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcc
Confidence 999999999999999999998864 48999999999999999999999999999999999999887653
No 52
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.86 E-value=2.3e-21 Score=217.79 Aligned_cols=203 Identities=21% Similarity=0.157 Sum_probs=147.8
Q ss_pred chHHHH-HHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhC---cHHHHHHHHHcCCCCC----CcCCCCCcc
Q 011309 10 SGERLV-SAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKG---HNEIVALLLENGADVN----SRNYCGQVT 81 (489)
Q Consensus 10 s~t~L~-~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G---~~eivk~LLe~Gad~n----~~d~~g~i~ 81 (489)
+.|||| .|+..++.++++.|++.|. .+ ..|.||||+|+..+ ..+++++|++.+.+-+ ..+ ..
T Consensus 52 G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~--~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~----~~ 121 (743)
T TIGR00870 52 GRSALFVAAIENENLELTELLLNLSC----RG--AVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELAND----QY 121 (743)
T ss_pred chhHHHHHHHhcChHHHHHHHHhCCC----CC--CcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhcc----cc
Confidence 457999 9999999999999999886 22 23489999999732 2234444444442211 000 01
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHH
Q 011309 82 RADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMA 161 (489)
Q Consensus 82 ~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~A 161 (489)
..++..|.||||+|+.+|+.++|++|++.+++.+..... .... ..........|.||||.|
T Consensus 122 ~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~----------~~~~---------~~~~~~~~~~g~tpL~~A 182 (743)
T TIGR00870 122 TSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACG----------DFFV---------KSQGVDSFYHGESPLNAA 182 (743)
T ss_pred ccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCC----------chhh---------cCCCCCcccccccHHHHH
Confidence 122347999999999999999999999987764411000 0000 000001224689999999
Q ss_pred HHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcC---------CHHHHHHHHHcCCCC-------Cc
Q 011309 162 ALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGG---------NLKCCQVLLSRGASR-------MS 225 (489)
Q Consensus 162 a~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g---------~~eivk~LL~~Gadv-------n~ 225 (489)
+..|+.+++++|+++|+|++..|.. |+||||+|+..+ ...+.+++++.++.. +.
T Consensus 183 a~~~~~~iv~lLl~~gadin~~d~~----------g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i 252 (743)
T TIGR00870 183 ACLGSPSIVALLSEDPADILTADSL----------GNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVI 252 (743)
T ss_pred HHhCCHHHHHHHhcCCcchhhHhhh----------hhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhh
Confidence 9999999999999999999999977 999999999987 234667777665554 67
Q ss_pred cCCCCCcHHHHHHHcCcHhHHHHhcC
Q 011309 226 LNCNGWLPLDVARMWGRHWLEPLLAP 251 (489)
Q Consensus 226 ~d~~G~TpL~~A~~~g~~~i~~LL~~ 251 (489)
.|.+|.||||+|+..|+.+++++|.+
T Consensus 253 ~N~~g~TPL~~A~~~g~~~l~~lLL~ 278 (743)
T TIGR00870 253 LNHQGLTPLKLAAKEGRIVLFRLKLA 278 (743)
T ss_pred cCCCCCCchhhhhhcCCccHHHHHHH
Confidence 79999999999999999999988877
No 53
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.85 E-value=1.7e-21 Score=205.07 Aligned_cols=211 Identities=26% Similarity=0.316 Sum_probs=163.3
Q ss_pred chHHHHHHHHcCCHHHHHHHhhcC-----C--------CCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCC
Q 011309 10 SGERLVSAARDGDFVEAKMLLDCN-----P--------CLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNY 76 (489)
Q Consensus 10 s~t~L~~Aa~~G~~~~Vk~LL~~g-----~--------~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~ 76 (489)
..+-|..|++.||++.|..||+.. + ..+..+. .|.|+||.|+.+|+.+++++|+++.+-++..|.
T Consensus 3 k~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~--~gfTalhha~Lng~~~is~llle~ea~ldl~d~ 80 (854)
T KOG0507|consen 3 KKQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDY--SGFTLLHHAVLNGQNQISKLLLDYEALLDLCDT 80 (854)
T ss_pred hhhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCc--cchhHHHHHHhcCchHHHHHHhcchhhhhhhhc
Confidence 346799999999999999999842 1 1222233 459999999999999999999999999988887
Q ss_pred CCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCcc
Q 011309 77 CGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGIT 156 (489)
Q Consensus 77 ~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~T 156 (489)
.|.+|||+|+-.|+.+++++|+.+.. .+|.....|.|
T Consensus 81 ----------kg~~plhlaaw~g~~e~vkmll~q~d---------------------------------~~na~~~e~~t 117 (854)
T KOG0507|consen 81 ----------KGILPLHLAAWNGNLEIVKMLLLQTD---------------------------------ILNAVNIENET 117 (854)
T ss_pred ----------cCcceEEehhhcCcchHHHHHHhccc---------------------------------CCCcccccCcC
Confidence 99999999999999999999996531 25666667777
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccC-------------------------------CCCCcHHHHHH
Q 011309 157 ALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLI-------------------------------GAGSTPLHFAA 205 (489)
Q Consensus 157 pLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~-------------------------------~~G~TpLh~Aa 205 (489)
|||.||++||.++|.+|+.+|+|.-..+..+++.+++. -.+.+|||+|+
T Consensus 118 plhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaa 197 (854)
T KOG0507|consen 118 PLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAA 197 (854)
T ss_pred ccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhh
Confidence 77777777777777777777777777666665555432 23678999999
Q ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhcC-CCCCCCCCCCCCCCcchhh
Q 011309 206 CGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAP-SSDAVMPRFHPSNYLSLPL 270 (489)
Q Consensus 206 ~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~~-~~~~~~~~~~~~~~~~~pl 270 (489)
++|+.++++.|+++|.|+|.....| |+||.|+.-|..+++.+|++ +....+. +.++++.+
T Consensus 198 kngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~----n~~~qtal 258 (854)
T KOG0507|consen 198 KNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIK----NQHGQTAL 258 (854)
T ss_pred hcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccc----cccchHHH
Confidence 9999999999999999998887665 79999999999988776655 4443333 34444444
No 54
>PHA02741 hypothetical protein; Provisional
Probab=99.85 E-value=8.9e-21 Score=174.69 Aligned_cols=131 Identities=21% Similarity=0.217 Sum_probs=114.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCC
Q 011309 87 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 166 (489)
Q Consensus 87 ~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 166 (489)
.|.||||+|+..|+.+++++|+..... ...+..++.+|..|.||||+|+..|+
T Consensus 20 ~g~t~Lh~Aa~~g~~~~v~~l~~~~~~---------------------------~~~ga~in~~d~~g~T~Lh~A~~~g~ 72 (169)
T PHA02741 20 EGENFFHEAARCGCFDIIARFTPFIRG---------------------------DCHAAALNATDDAGQMCIHIAAEKHE 72 (169)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHHhcc---------------------------chhhhhhhccCCCCCcHHHHHHHcCC
Confidence 899999999999999999998742100 01123478899999999999999999
Q ss_pred ----HHHHHHHHhcCCCcccccc-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCcHHHHHHHc
Q 011309 167 ----FDCVQLLLDLHANVSAVTF-HYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS-RGASRMSLNCNGWLPLDVARMW 240 (489)
Q Consensus 167 ----~e~v~~LL~~Gadvn~~~~-~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~-~Gadvn~~d~~G~TpL~~A~~~ 240 (489)
.+++++|+++|++++.++. . |+||||+|+..++.+++++|++ .|++++.+|.+|+||||+|+..
T Consensus 73 ~~~~~~ii~~Ll~~gadin~~~~~~----------g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~ 142 (169)
T PHA02741 73 AQLAAEIIDHLIELGADINAQEMLE----------GDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDN 142 (169)
T ss_pred hHHHHHHHHHHHHcCCCCCCCCcCC----------CCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHC
Confidence 5899999999999999874 4 9999999999999999999998 5999999999999999999999
Q ss_pred CcHhHHHHhcCCCC
Q 011309 241 GRHWLEPLLAPSSD 254 (489)
Q Consensus 241 g~~~i~~LL~~~~~ 254 (489)
++.+++++|.+...
T Consensus 143 ~~~~iv~~L~~~~~ 156 (169)
T PHA02741 143 EDVAMMQILREIVA 156 (169)
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999977543
No 55
>PHA02741 hypothetical protein; Provisional
Probab=99.84 E-value=2.1e-20 Score=172.27 Aligned_cols=126 Identities=22% Similarity=0.214 Sum_probs=112.2
Q ss_pred CchHHHHHHHhCcHHHHHHHHH------cCCCCCCcCCCCCcccccCCCCChHHHHHHHcCC----HHHHHHHHHccCCC
Q 011309 45 LNSPLHFAAAKGHNEIVALLLE------NGADVNSRNYCGQVTRADYLSGRTALHFAAVNGH----VRCIRLVVADFVPS 114 (489)
Q Consensus 45 g~TpLh~Aa~~G~~eivk~LLe------~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~----~~~vk~LL~~~~~~ 114 (489)
|.||||+|++.|+.++|++|+. .|++++.+|. .|+||||+|+..|+ .+++++|++.+..
T Consensus 21 g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~----------~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad- 89 (169)
T PHA02741 21 GENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDD----------AGQMCIHIAAEKHEAQLAAEIIDHLIELGAD- 89 (169)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCC----------CCCcHHHHHHHcCChHHHHHHHHHHHHcCCC-
Confidence 4899999999999999999864 3688999998 89999999999999 5788888876543
Q ss_pred CCccccccccccccCCchhhhhhhhhhhhhhhhccccC-CCccHHHHHHHcCCHHHHHHHHh-cCCCcccccccCCCccc
Q 011309 115 VPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAAD-GGITALHMAALNGYFDCVQLLLD-LHANVSAVTFHYGTSMD 192 (489)
Q Consensus 115 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~-~G~TpLh~Aa~~g~~e~v~~LL~-~Gadvn~~~~~~~~~~~ 192 (489)
+|.++. .|.||||+|+..++.+++++|++ .|++++..+..
T Consensus 90 --------------------------------in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~------ 131 (169)
T PHA02741 90 --------------------------------INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNAD------ 131 (169)
T ss_pred --------------------------------CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCC------
Confidence 777775 89999999999999999999997 59999998876
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 011309 193 LIGAGSTPLHFAACGGNLKCCQVLLSRGASR 223 (489)
Q Consensus 193 ~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadv 223 (489)
|.||||+|+..++.+++++|++.++..
T Consensus 132 ----g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 132 ----NKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred ----CCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999987654
No 56
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.84 E-value=3.9e-20 Score=169.96 Aligned_cols=133 Identities=21% Similarity=0.188 Sum_probs=115.3
Q ss_pred chHHHHHHHHcCCH----HHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHH---HHHHHHcCCCCCCcCCCCCccc
Q 011309 10 SGERLVSAARDGDF----VEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEI---VALLLENGADVNSRNYCGQVTR 82 (489)
Q Consensus 10 s~t~L~~Aa~~G~~----~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~ei---vk~LLe~Gad~n~~d~~g~i~~ 82 (489)
..++||.|++.|++ +++++|++.++.++..+..+ +||||+|+..|+.++ +++|+++|+++|.++.
T Consensus 20 ~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g--~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~------ 91 (166)
T PHA02743 20 EQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHG--RQCTHMVAWYDRANAVMKIELLVNMGADINAREL------ 91 (166)
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCC--CcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCC------
Confidence 34689999999998 56667788888887766655 999999999998654 8999999999999872
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHH-ccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHH
Q 011309 83 ADYLSGRTALHFAAVNGHVRCIRLVVA-DFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMA 161 (489)
Q Consensus 83 ~d~~~G~TpLh~Aa~~g~~~~vk~LL~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~A 161 (489)
..|.||||+|+..|+.+++++|+. .+.. ++.++..|.||||+|
T Consensus 92 ---~~g~TpLh~A~~~g~~~iv~~Ll~~~gad---------------------------------~~~~d~~g~tpL~~A 135 (166)
T PHA02743 92 ---GTGNTLLHIAASTKNYELAEWLCRQLGVN---------------------------------LGAINYQHETAYHIA 135 (166)
T ss_pred ---CCCCcHHHHHHHhCCHHHHHHHHhccCCC---------------------------------ccCcCCCCCCHHHHH
Confidence 179999999999999999999995 4432 678889999999999
Q ss_pred HHcCCHHHHHHHHhcCCCccccccc
Q 011309 162 ALNGYFDCVQLLLDLHANVSAVTFH 186 (489)
Q Consensus 162 a~~g~~e~v~~LL~~Gadvn~~~~~ 186 (489)
+..++.+++++|+++|++++.++..
T Consensus 136 ~~~~~~~iv~~Ll~~ga~~~~~~~~ 160 (166)
T PHA02743 136 YKMRDRRMMEILRANGAVCDDPLSI 160 (166)
T ss_pred HHcCCHHHHHHHHHcCCCCCCcccC
Confidence 9999999999999999999998865
No 57
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.84 E-value=5.2e-20 Score=183.23 Aligned_cols=151 Identities=19% Similarity=0.156 Sum_probs=120.2
Q ss_pred chHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccc
Q 011309 46 NSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIE 125 (489)
Q Consensus 46 ~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~ 125 (489)
.++||.|+..|+.+++++|+++|+++|.++. .+...|.||||+|+..|+.+++++|++.|++
T Consensus 34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~------~sd~~g~TpLh~Aa~~~~~eivklLL~~GAD------------ 95 (300)
T PHA02884 34 ANILYSSIKFHYTDIIDAILKLGADPEAPFP------LSENSKTNPLIYAIDCDNDDAAKLLIRYGAD------------ 95 (300)
T ss_pred CHHHHHHHHcCCHHHHHHHHHCCCCccccCc------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 5778888888999999999999999998741 0012799999999999999999999987655
Q ss_pred cccCCchhhhhhhhhhhhhhhhccc-cCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHH
Q 011309 126 GDRGDGSSVKSKCDQSALSKFVNKA-ADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFA 204 (489)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~in~~-d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~A 204 (489)
+|.. +..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|
T Consensus 96 ---------------------VN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~----------G~TpL~~A 144 (300)
T PHA02884 96 ---------------------VNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTND----------MVTPIELA 144 (300)
T ss_pred ---------------------cCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC----------CCCHHHHH
Confidence 6765 457999999999999999999999999999998876 89999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhcCCC
Q 011309 205 ACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSS 253 (489)
Q Consensus 205 a~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~~~~ 253 (489)
+..++.+++.++. |.. .+..+.+|++++ ++.+++++|..+.
T Consensus 145 ~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~---~n~ei~~~Lish~ 185 (300)
T PHA02884 145 LMICNNFLAFMIC--DNE---ISNFYKHPKKIL---INFDILKILVSHF 185 (300)
T ss_pred HHhCChhHHHHhc--CCc---ccccccChhhhh---ccHHHHHHHHHHH
Confidence 9988888876664 322 456677888875 3566666665543
No 58
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.83 E-value=7.8e-21 Score=185.54 Aligned_cols=158 Identities=25% Similarity=0.267 Sum_probs=132.1
Q ss_pred CCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccc
Q 011309 71 VNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKA 150 (489)
Q Consensus 71 ~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~ 150 (489)
+|..|. +|.|+||||+.++++++|+.||+.+.- .++.+
T Consensus 261 VNlaDs----------NGNTALHYsVSHaNF~VV~~LLDSgvC--------------------------------~VD~q 298 (452)
T KOG0514|consen 261 VNLADS----------NGNTALHYAVSHANFDVVSILLDSGVC--------------------------------DVDQQ 298 (452)
T ss_pred hhhhcC----------CCCeeeeeeecccchHHHHHHhccCcc--------------------------------ccccc
Confidence 566666 999999999999999999999976432 28899
Q ss_pred cCCCccHHHHHHHc-----CCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc
Q 011309 151 ADGGITALHMAALN-----GYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMS 225 (489)
Q Consensus 151 d~~G~TpLh~Aa~~-----g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~ 225 (489)
++-|+||+|+|+.. .+.++|+.|+..| |||++... .|+|+||+|+.+|+.++|+.||..|||+|+
T Consensus 299 NrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ---------~gQTALMLAVSHGr~d~vk~LLacgAdVNi 368 (452)
T KOG0514|consen 299 NRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQ---------HGQTALMLAVSHGRVDMVKALLACGADVNI 368 (452)
T ss_pred ccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhh---------hcchhhhhhhhcCcHHHHHHHHHccCCCcc
Confidence 99999999999874 4678999998764 67877655 499999999999999999999999999999
Q ss_pred cCCCCCcHHHHHHHcCcHhHHHHhcCCCCCCCCCCCCCCCcchhhHHHHHHHHHcCCcccc
Q 011309 226 LNCNGWLPLDVARMWGRHWLEPLLAPSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSST 286 (489)
Q Consensus 226 ~d~~G~TpL~~A~~~g~~~i~~LL~~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~G~~~~~ 286 (489)
+|.+|-|+|+.|+.+||.+|+++|+.....++... +..++++| .++-+.|++.+-
T Consensus 369 QDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLt--D~DgSTAl----~IAleagh~eIa 423 (452)
T KOG0514|consen 369 QDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLT--DVDGSTAL----SIALEAGHREIA 423 (452)
T ss_pred ccCCccHHHhhhhhhChHHHHHHHhccCcccceee--cCCCchhh----hhHHhcCchHHH
Confidence 99999999999999999999999988777665533 44556664 456666665443
No 59
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.83 E-value=6.9e-20 Score=182.31 Aligned_cols=151 Identities=16% Similarity=0.155 Sum_probs=128.4
Q ss_pred hHHHHHHHHcCCHHHHHHHhhcCCCCcccCC--CCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCC
Q 011309 11 GERLVSAARDGDFVEAKMLLDCNPCLAKYST--FGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSG 88 (489)
Q Consensus 11 ~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~--~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G 88 (489)
.++||.|++.|+.++|++|+++|++++.... +..|.||||+|+..|+.+++++|+++||++|..+. ..|
T Consensus 34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~---------~~g 104 (300)
T PHA02884 34 ANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAE---------EAK 104 (300)
T ss_pred CHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccC---------CCC
Confidence 4689999999999999999999999987642 22459999999999999999999999999998642 179
Q ss_pred ChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHH
Q 011309 89 RTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFD 168 (489)
Q Consensus 89 ~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e 168 (489)
.||||+|+..|+.+++++|+..+++ ++.+|..|.||||+|+..++.+
T Consensus 105 ~TpLh~Aa~~~~~eivklLL~~GAd---------------------------------in~kd~~G~TpL~~A~~~~~~~ 151 (300)
T PHA02884 105 ITPLYISVLHGCLKCLEILLSYGAD---------------------------------INIQTNDMVTPIELALMICNNF 151 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCC---------------------------------CCCCCCCCCCHHHHHHHhCChh
Confidence 9999999999999999999987655 7888999999999999999999
Q ss_pred HHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 011309 169 CVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGA 221 (489)
Q Consensus 169 ~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Ga 221 (489)
++.++. |..+ +.. +.+|++++ ++.|++++|+.+++
T Consensus 152 ~~~~~~--~~~~---~~~----------~~~~~~~~---~n~ei~~~Lish~v 186 (300)
T PHA02884 152 LAFMIC--DNEI---SNF----------YKHPKKIL---INFDILKILVSHFI 186 (300)
T ss_pred HHHHhc--CCcc---ccc----------ccChhhhh---ccHHHHHHHHHHHH
Confidence 886665 3322 222 67888875 47999999999987
No 60
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.83 E-value=1.7e-20 Score=191.75 Aligned_cols=171 Identities=33% Similarity=0.433 Sum_probs=153.7
Q ss_pred HHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccc
Q 011309 48 PLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGD 127 (489)
Q Consensus 48 pLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~ 127 (489)
.+.-|+..|..+-|..||..|+++|..|. +|.|+||-++...+.+||++|++.++.
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~----------DglTalhq~~id~~~e~v~~l~e~ga~-------------- 98 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGASPNLCNV----------DGLTALHQACIDDNLEMVKFLVENGAN-------------- 98 (527)
T ss_pred HHHhccccccHHHHHHHhccCCCccccCC----------ccchhHHHHHhcccHHHHHHHHHhcCC--------------
Confidence 45557788999999999999999999998 999999999999999999999987654
Q ss_pred cCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccC-------------
Q 011309 128 RGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLI------------- 194 (489)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~------------- 194 (489)
||..|..|+||||.|+..||..++++|+++|+++.+.+..++.+.++.
T Consensus 99 -------------------Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~ 159 (527)
T KOG0505|consen 99 -------------------VNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEM 159 (527)
T ss_pred -------------------ccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHH
Confidence 999999999999999999999999999999999999999988887543
Q ss_pred ------------------------------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Q 011309 195 ------------------------------------GAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVAR 238 (489)
Q Consensus 195 ------------------------------------~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~ 238 (489)
..|.|+||+|+.+|..++.++||++|.+++++|.+||||||.|+
T Consensus 160 ~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA 239 (527)
T KOG0505|consen 160 ARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAA 239 (527)
T ss_pred HHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHH
Confidence 34899999999999999999999999999999999999999999
Q ss_pred HcCcHhHHHHhcC-CCCCCCCCCC
Q 011309 239 MWGRHWLEPLLAP-SSDAVMPRFH 261 (489)
Q Consensus 239 ~~g~~~i~~LL~~-~~~~~~~~~~ 261 (489)
.||..++.++|.. +++.+...+.
T Consensus 240 ~Wg~~~~~elL~~~ga~~d~~t~~ 263 (527)
T KOG0505|consen 240 HWGQEDACELLVEHGADMDAKTKM 263 (527)
T ss_pred HhhhHhHHHHHHHhhcccchhhhc
Confidence 9999998877755 4555555443
No 61
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.82 E-value=4.4e-20 Score=167.21 Aligned_cols=126 Identities=21% Similarity=0.224 Sum_probs=105.1
Q ss_pred CCchHHHHHHHhCcHHHHHHHHHcCCC-------CCCcCCCCCcccccCCCCChHHHHHHHcCCHH---HHHHHHHccCC
Q 011309 44 GLNSPLHFAAAKGHNEIVALLLENGAD-------VNSRNYCGQVTRADYLSGRTALHFAAVNGHVR---CIRLVVADFVP 113 (489)
Q Consensus 44 ~g~TpLh~Aa~~G~~eivk~LLe~Gad-------~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~---~vk~LL~~~~~ 113 (489)
.|.||||+|++.|+. +++|+..+.. ++.+|. .|+||||+|+..|+.+ ++++|++.+..
T Consensus 16 ~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~----------~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad 83 (154)
T PHA02736 16 EGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNR----------HGKQCVHIVSNPDKADPQEKLKLLMEWGAD 83 (154)
T ss_pred CCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcC----------CCCEEEEeecccCchhHHHHHHHHHHcCCC
Confidence 359999999999983 4444433322 223455 8999999999999874 67888876543
Q ss_pred CCCccccccccccccCCchhhhhhhhhhhhhhhhcccc-CCCccHHHHHHHcCCHHHHHHHHh-cCCCcccccccCCCcc
Q 011309 114 SVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAA-DGGITALHMAALNGYFDCVQLLLD-LHANVSAVTFHYGTSM 191 (489)
Q Consensus 114 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d-~~G~TpLh~Aa~~g~~e~v~~LL~-~Gadvn~~~~~~~~~~ 191 (489)
++.++ ..|.||||+|+..|+.+++++|++ .|++++..+..
T Consensus 84 ---------------------------------in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~----- 125 (154)
T PHA02736 84 ---------------------------------INGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYA----- 125 (154)
T ss_pred ---------------------------------ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCC-----
Confidence 77787 489999999999999999999998 59999998876
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 011309 192 DLIGAGSTPLHFAACGGNLKCCQVLLSRGASRM 224 (489)
Q Consensus 192 ~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn 224 (489)
|.||||+|+..|+.+++++|+++|++.+
T Consensus 126 -----g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 126 -----FKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred -----CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999875
No 62
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.81 E-value=8.4e-20 Score=165.39 Aligned_cols=129 Identities=22% Similarity=0.230 Sum_probs=105.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCC
Q 011309 87 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 166 (489)
Q Consensus 87 ~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 166 (489)
.|.||||+|+..|+. +.+++..... .......++..|..|.||||+|+..|+
T Consensus 16 ~g~tpLh~A~~~g~~--~~l~~~~~~~--------------------------~~~~~~~~~~~d~~g~t~Lh~a~~~~~ 67 (154)
T PHA02736 16 EGENILHYLCRNGGV--TDLLAFKNAI--------------------------SDENRYLVLEYNRHGKQCVHIVSNPDK 67 (154)
T ss_pred CCCCHHHHHHHhCCH--HHHHHHHHHh--------------------------cchhHHHHHHhcCCCCEEEEeecccCc
Confidence 899999999999983 3443321000 000112245678899999999999998
Q ss_pred H---HHHHHHHhcCCCcccccc-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCcHHHHHHHcC
Q 011309 167 F---DCVQLLLDLHANVSAVTF-HYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS-RGASRMSLNCNGWLPLDVARMWG 241 (489)
Q Consensus 167 ~---e~v~~LL~~Gadvn~~~~-~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~-~Gadvn~~d~~G~TpL~~A~~~g 241 (489)
. +++++|+++|++++.++. . |+||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+..|
T Consensus 68 ~~~~e~v~~Ll~~gadin~~~~~~----------g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~ 137 (154)
T PHA02736 68 ADPQEKLKLLMEWGADINGKERVF----------GNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERH 137 (154)
T ss_pred hhHHHHHHHHHHcCCCccccCCCC----------CCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcC
Confidence 7 468999999999999874 4 9999999999999999999998 59999999999999999999999
Q ss_pred cHhHHHHhcCCC
Q 011309 242 RHWLEPLLAPSS 253 (489)
Q Consensus 242 ~~~i~~LL~~~~ 253 (489)
+.+++++|...+
T Consensus 138 ~~~i~~~Ll~~g 149 (154)
T PHA02736 138 DAKMMNILRAKG 149 (154)
T ss_pred CHHHHHHHHHcC
Confidence 999988776543
No 63
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.78 E-value=1.3e-18 Score=154.42 Aligned_cols=87 Identities=36% Similarity=0.306 Sum_probs=59.8
Q ss_pred hccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcc
Q 011309 147 VNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSL 226 (489)
Q Consensus 147 in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~ 226 (489)
+|.+|.+|.||||.|+++||.++|+.|+..||++++++.. |+||||-|+.+++.+++-+||++|+|+|+.
T Consensus 90 vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~----------GWTPLhSAckWnN~~va~~LLqhgaDVnA~ 159 (228)
T KOG0512|consen 90 VNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNE----------GWTPLHSACKWNNFEVAGRLLQHGADVNAQ 159 (228)
T ss_pred ccccccccccHHHHHHhcCchHHHHHHHHccCCccccccc----------CccchhhhhcccchhHHHHHHhccCccccc
Confidence 6666667777777777777777777777777777666655 677777777777777777777777777766
Q ss_pred CCCCCcHHHHHHHcCcH
Q 011309 227 NCNGWLPLDVARMWGRH 243 (489)
Q Consensus 227 d~~G~TpL~~A~~~g~~ 243 (489)
.+..+||||+|+...+.
T Consensus 160 t~g~ltpLhlaa~~rn~ 176 (228)
T KOG0512|consen 160 TKGLLTPLHLAAGNRNS 176 (228)
T ss_pred ccccchhhHHhhcccch
Confidence 66666777777665544
No 64
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.78 E-value=1.7e-19 Score=194.56 Aligned_cols=284 Identities=21% Similarity=0.216 Sum_probs=222.4
Q ss_pred hHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCCh
Q 011309 11 GERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRT 90 (489)
Q Consensus 11 ~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~T 90 (489)
.++|-.|+..|+.|+|+.|+.+|+++..+++.+ .+||.+|+-.||..+|+.||.+.++++.... ..+.|
T Consensus 758 ~t~LT~acaggh~e~vellv~rganiehrdkkg--f~plImaatagh~tvV~~llk~ha~veaQsd---------rtkdt 826 (2131)
T KOG4369|consen 758 KTNLTSACAGGHREEVELLVVRGANIEHRDKKG--FVPLIMAATAGHITVVQDLLKAHADVEAQSD---------RTKDT 826 (2131)
T ss_pred cccccccccCccHHHHHHHHHhccccccccccc--chhhhhhcccCchHHHHHHHhhhhhhhhhcc---------cccCc
Confidence 468999999999999999999999998888777 9999999999999999999999999987654 38999
Q ss_pred HHHHHHHcCCHHHHHHHHHccCCCCC---ccccccccccccCCchhhhhhhhhhhhhhhhccc--cCCCccHHHHHHHcC
Q 011309 91 ALHFAAVNGHVRCIRLVVADFVPSVP---FEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKA--ADGGITALHMAALNG 165 (489)
Q Consensus 91 pLh~Aa~~g~~~~vk~LL~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~--d~~G~TpLh~Aa~~g 165 (489)
+|-+|+..|+.++|++||..++.+.. ...+++.++...++...+..++... ..||.+ .+.|..||++|..+|
T Consensus 827 ~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~G---seInSrtgSklgisPLmlatmng 903 (2131)
T KOG4369|consen 827 MLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSG---SEINSRTGSKLGISPLMLATMNG 903 (2131)
T ss_pred eEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcc---cccccccccccCcchhhhhhhcc
Confidence 99999999999999999998775544 3455555655555555555443322 224444 467999999999999
Q ss_pred CHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhH
Q 011309 166 YFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWL 245 (489)
Q Consensus 166 ~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i 245 (489)
|.+.++.|++.|.|+|+.-.. ..+|+|.+|+..|+.|+|.+||.+.+++..+-+.|.|||+-++..|+.++
T Consensus 904 h~~at~~ll~~gsdiNaqIeT---------NrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdv 974 (2131)
T KOG4369|consen 904 HQAATLSLLQPGSDINAQIET---------NRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDV 974 (2131)
T ss_pred ccHHHHHHhcccchhcccccc---------ccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCcccc
Confidence 999999999999999975332 37899999999999999999999999999999999999999999999999
Q ss_pred HHHh-cCCCCCCCCCCC--CCCCcc----------hhhHH----HHHHHHHcCCccccccCCC-Ccchhhhhhhhccccc
Q 011309 246 EPLL-APSSDAVMPRFH--PSNYLS----------LPLLS----VLNVARECGLLSSTTSSSD-DADTCAVCLERACTVA 307 (489)
Q Consensus 246 ~~LL-~~~~~~~~~~~~--~~~~~~----------~pl~~----~l~~a~~~G~~~~~~a~~~-~~~~C~iCle~~~~v~ 307 (489)
-.+| ..++|.+....+ .+.++- .+++. .+++-..+|.+.+|.+... ....|.+.++...+..
T Consensus 975 g~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d 1054 (2131)
T KOG4369|consen 975 GNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADAD 1054 (2131)
T ss_pred chhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChh
Confidence 7666 556666554332 111111 11111 2445556676777764433 3467889999999999
Q ss_pred ccCCcchhhh
Q 011309 308 AEGCRHELCV 317 (489)
Q Consensus 308 ~~~C~H~~C~ 317 (489)
-..|+..-|.
T Consensus 1055 ~qdnr~~S~~ 1064 (2131)
T KOG4369|consen 1055 QQDNRTNSRT 1064 (2131)
T ss_pred hhhccccccc
Confidence 9999875443
No 65
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.77 E-value=2e-18 Score=153.12 Aligned_cols=90 Identities=34% Similarity=0.417 Sum_probs=45.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCC-cccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHH
Q 011309 158 LHMAALNGYFDCVQLLLDLHAN-VSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDV 236 (489)
Q Consensus 158 Lh~Aa~~g~~e~v~~LL~~Gad-vn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~ 236 (489)
+.+|+..+....|+.||+..++ ||.+|.. |.||||.|+.+|+++||+.|+..||+++++...||||||-
T Consensus 67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D----------~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhS 136 (228)
T KOG0512|consen 67 LLWAAEKNRLTEVQRLLSEKANHVNTRDED----------EYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHS 136 (228)
T ss_pred HHHHHhhccHHHHHHHHHhccccccccccc----------cccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhh
Confidence 3445555555555555544332 4444443 5555555555555555555555555555555555555555
Q ss_pred HHHcCcHhHH-HHhcCCCCCCC
Q 011309 237 ARMWGRHWLE-PLLAPSSDAVM 257 (489)
Q Consensus 237 A~~~g~~~i~-~LL~~~~~~~~ 257 (489)
|++|.+.+++ .||..+++++.
T Consensus 137 AckWnN~~va~~LLqhgaDVnA 158 (228)
T KOG0512|consen 137 ACKWNNFEVAGRLLQHGADVNA 158 (228)
T ss_pred hhcccchhHHHHHHhccCcccc
Confidence 5555555544 22333444443
No 66
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.75 E-value=1.4e-18 Score=164.99 Aligned_cols=135 Identities=37% Similarity=0.466 Sum_probs=118.3
Q ss_pred HHhCcHHHHHHHH-HcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCc
Q 011309 53 AAKGHNEIVALLL-ENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDG 131 (489)
Q Consensus 53 a~~G~~eivk~LL-e~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~ 131 (489)
++.|+.--|++.| +..-|.|.-|. .|.+|||||+..||..+|+.|+..|+.
T Consensus 8 cregna~qvrlwld~tehdln~gdd----------hgfsplhwaakegh~aivemll~rgar------------------ 59 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDD----------HGFSPLHWAAKEGHVAIVEMLLSRGAR------------------ 59 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccc----------cCcchhhhhhhcccHHHHHHHHhcccc------------------
Confidence 3444443444444 45678888887 999999999999999999999988765
Q ss_pred hhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHH
Q 011309 132 SSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLK 211 (489)
Q Consensus 132 ~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~e 211 (489)
+|..+....||||+|+.+||.++|+.||+..+|+|+.+.+ |+||||||+.+|...
T Consensus 60 ---------------vn~tnmgddtplhlaaahghrdivqkll~~kadvnavneh----------gntplhyacfwgydq 114 (448)
T KOG0195|consen 60 ---------------VNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEH----------GNTPLHYACFWGYDQ 114 (448)
T ss_pred ---------------cccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhcc----------CCCchhhhhhhcHHH
Confidence 7777777889999999999999999999999999999988 999999999999999
Q ss_pred HHHHHHHcCCCCCccCCCCCcHHHHHHHc
Q 011309 212 CCQVLLSRGASRMSLNCNGWLPLDVARMW 240 (489)
Q Consensus 212 ivk~LL~~Gadvn~~d~~G~TpL~~A~~~ 240 (489)
+++-|+..||-+++.|++|.|||..|--.
T Consensus 115 iaedli~~ga~v~icnk~g~tpldkakp~ 143 (448)
T KOG0195|consen 115 IAEDLISCGAAVNICNKKGMTPLDKAKPM 143 (448)
T ss_pred HHHHHHhccceeeecccCCCCchhhhchH
Confidence 99999999999999999999999988543
No 67
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.75 E-value=7.9e-18 Score=179.73 Aligned_cols=212 Identities=25% Similarity=0.210 Sum_probs=162.4
Q ss_pred HHHHHHHHcCCHHHHHHHhhcCC---------CCcccCCCCCCchHHHHHHH---hCcHHHHHHHHHcCCCCCCcCCCCC
Q 011309 12 ERLVSAARDGDFVEAKMLLDCNP---------CLAKYSTFGGLNSPLHFAAA---KGHNEIVALLLENGADVNSRNYCGQ 79 (489)
Q Consensus 12 t~L~~Aa~~G~~~~Vk~LL~~g~---------~l~~~~~~~~g~TpLh~Aa~---~G~~eivk~LLe~Gad~n~~d~~g~ 79 (489)
.+++.|...|.++.+..|+..+. +++.+... |.|.||.|.- .++.++++.||+.-.. ..|.
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~--GET~Lh~~lL~~~~~~n~la~~LL~~~p~--lind--- 175 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGAT--GETLLHKALLNLSDGHNELARVLLEIFPK--LIND--- 175 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccch--hhhHHHHHHhcCchhHHHHHHHHHHHhHH--Hhhh---
Confidence 57899999999999999988762 33333333 4999999997 4567999999985321 1111
Q ss_pred cccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhcc--ccCCCccH
Q 011309 80 VTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNK--AADGGITA 157 (489)
Q Consensus 80 i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~--~d~~G~Tp 157 (489)
+...++..|.||||+|+.+.+.++|++|++.+++......-........ .......|. .-..|..|
T Consensus 176 ~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dq------------k~~rk~T~Y~G~~YfGEyP 243 (782)
T KOG3676|consen 176 IYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQ------------KASRKSTNYTGYFYFGEYP 243 (782)
T ss_pred hhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccc------------cccccccCCcceeeeccCc
Confidence 2233456999999999999999999999998876443211111000000 000000111 12368899
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CCccCCCCCcHHH
Q 011309 158 LHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGAS--RMSLNCNGWLPLD 235 (489)
Q Consensus 158 Lh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gad--vn~~d~~G~TpL~ 235 (489)
|-+||-.++.|+|++|+++|||++++|.+ |+|.||.-+..-..++-+++|++|++ ...+|++|.|||.
T Consensus 244 LSfAAC~nq~eivrlLl~~gAd~~aqDS~----------GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLt 313 (782)
T KOG3676|consen 244 LSFAACTNQPEIVRLLLAHGADPNAQDSN----------GNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLT 313 (782)
T ss_pred hHHHHHcCCHHHHHHHHhcCCCCCccccC----------CChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHH
Confidence 99999999999999999999999999987 99999999999999999999999999 8899999999999
Q ss_pred HHHHcCcHhHHHHhcCC
Q 011309 236 VARMWGRHWLEPLLAPS 252 (489)
Q Consensus 236 ~A~~~g~~~i~~LL~~~ 252 (489)
+|++.|+.+|.+.+.+.
T Consensus 314 LAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 314 LAAKLGKKEMFQHILER 330 (782)
T ss_pred HHHHhhhHHHHHHHHHh
Confidence 99999999998877766
No 68
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.72 E-value=3.9e-18 Score=184.17 Aligned_cols=238 Identities=24% Similarity=0.207 Sum_probs=167.0
Q ss_pred hHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCCh
Q 011309 11 GERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRT 90 (489)
Q Consensus 11 ~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~T 90 (489)
+|+|-+|+..|..++|++||..|++-..+.-.+ +|||-+|...|..+||++||.+|+.||.+.. .+.|..
T Consensus 825 dt~lSlacsggr~~vvelLl~~gankehrnvsD--ytPlsla~Sggy~~iI~~llS~GseInSrtg--------Sklgis 894 (2131)
T KOG4369|consen 825 DTMLSLACSGGRTRVVELLLNAGANKEHRNVSD--YTPLSLARSGGYTKIIHALLSSGSEINSRTG--------SKLGIS 894 (2131)
T ss_pred CceEEEecCCCcchHHHHHHHhhccccccchhh--cCchhhhcCcchHHHHHHHhhcccccccccc--------cccCcc
Confidence 355666666666666666666666555444444 6777777777777777777777777776653 346888
Q ss_pred HHHHHHHcCCHHHHHHHHHccCCCCC----ccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCC
Q 011309 91 ALHFAAVNGHVRCIRLVVADFVPSVP----FEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 166 (489)
Q Consensus 91 pLh~Aa~~g~~~~vk~LL~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 166 (489)
||++|..+||...++.|++.+.+.+. ...+.+.++...+....+..+ ..+...+..+.+.|.|||+-+|..|.
T Consensus 895 PLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lL---La~~anvehRaktgltplme~AsgGy 971 (2131)
T KOG4369|consen 895 PLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLL---LAAQANVEHRAKTGLTPLMEMASGGY 971 (2131)
T ss_pred hhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHH---HHHhhhhhhhcccCCcccchhhcCCc
Confidence 88888888888888888876554333 233344444444544444433 33445577888899999999999999
Q ss_pred HHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHH
Q 011309 167 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 246 (489)
Q Consensus 167 ~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~ 246 (489)
+|+-++||+.|+|+|+.-.. ....|+|.+++..|+...|++||...|.+..+|++|.|+|.+|+..|+...+
T Consensus 972 vdvg~~li~~gad~nasPvp--------~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~ 1043 (2131)
T KOG4369|consen 972 VDVGNLLIAAGADTNASPVP--------NTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSC 1043 (2131)
T ss_pred cccchhhhhcccccccCCCC--------CcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccc
Confidence 99999999999999975433 1256888888888888888888888888888888888888888888888766
Q ss_pred HHhc-CCCCCCCCCCCCCCCcchhhHHH
Q 011309 247 PLLA-PSSDAVMPRFHPSNYLSLPLLSV 273 (489)
Q Consensus 247 ~LL~-~~~~~~~~~~~~~~~~~~pl~~~ 273 (489)
.+|. ..++.+.. ++...+++|.+
T Consensus 1044 ~il~~~~ad~d~q----dnr~~S~~maa 1067 (2131)
T KOG4369|consen 1044 PILVSSVADADQQ----DNRTNSRTMAA 1067 (2131)
T ss_pred hHHhhcccChhhh----hcccccccHHH
Confidence 5554 44555443 34444555543
No 69
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.71 E-value=8.1e-17 Score=131.76 Aligned_cols=89 Identities=39% Similarity=0.567 Sum_probs=78.7
Q ss_pred HHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHH
Q 011309 92 LHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQ 171 (489)
Q Consensus 92 Lh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~ 171 (489)
||+|+..|+.+++++|++.+.. ++. |.||||+|+..|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~---------------------------------~~~----~~~~l~~A~~~~~~~~~~ 43 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGAD---------------------------------INL----GNTALHYAAENGNLEIVK 43 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTST---------------------------------TTS----SSBHHHHHHHTTTHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCC---------------------------------CCC----CCCHHHHHHHcCCHHHHH
Confidence 7999999999999999975322 232 889999999999999999
Q ss_pred HHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccC
Q 011309 172 LLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLN 227 (489)
Q Consensus 172 ~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d 227 (489)
+|++.|++++..+.. |+||||+|+..|+.+++++|+++|++++.+|
T Consensus 44 ~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 44 LLLENGADINSQDKN----------GNTALHYAAENGNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHTTTCTT-BSTT----------SSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred HHHHhcccccccCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 999999999999866 9999999999999999999999999999876
No 70
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.5e-17 Score=158.15 Aligned_cols=154 Identities=32% Similarity=0.393 Sum_probs=123.4
Q ss_pred HHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHH
Q 011309 14 LVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALH 93 (489)
Q Consensus 14 L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh 93 (489)
++.=++.|+.-.|+..|+.........++ .|.+|||+|++.||..+|+.||.+|+.+|..|. ...||||
T Consensus 4 if~wcregna~qvrlwld~tehdln~gdd-hgfsplhwaakegh~aivemll~rgarvn~tnm----------gddtplh 72 (448)
T KOG0195|consen 4 IFGWCREGNAFQVRLWLDDTEHDLNVGDD-HGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNM----------GDDTPLH 72 (448)
T ss_pred hhhhhhcCCeEEEEEEecCcccccccccc-cCcchhhhhhhcccHHHHHHHHhcccccccccC----------CCCcchh
Confidence 34446778777777777654433333322 349999999999999999999999999999987 6789999
Q ss_pred HHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHH
Q 011309 94 FAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLL 173 (489)
Q Consensus 94 ~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~L 173 (489)
+|+.+||-++|+.|++.. ..+|..+..|+||||||+.-|+..+.+-|
T Consensus 73 laaahghrdivqkll~~k---------------------------------advnavnehgntplhyacfwgydqiaedl 119 (448)
T KOG0195|consen 73 LAAAHGHRDIVQKLLSRK---------------------------------ADVNAVNEHGNTPLHYACFWGYDQIAEDL 119 (448)
T ss_pred hhhhcccHHHHHHHHHHh---------------------------------cccchhhccCCCchhhhhhhcHHHHHHHH
Confidence 999999999999999653 33899999999999999999999999999
Q ss_pred HhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCCc
Q 011309 174 LDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL----SRGASRMS 225 (489)
Q Consensus 174 L~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL----~~Gadvn~ 225 (489)
+..||-|+..++. |.|||..|- .-+-+.|+ ++|-++|.
T Consensus 120 i~~ga~v~icnk~----------g~tpldkak----p~l~~~l~e~aek~gq~~nr 161 (448)
T KOG0195|consen 120 ISCGAAVNICNKK----------GMTPLDKAK----PMLKNTLLEIAEKHGQSPNR 161 (448)
T ss_pred HhccceeeecccC----------CCCchhhhc----hHHHHHHHHHHHHhCCCCCc
Confidence 9999999999987 999998873 33333333 35666653
No 71
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.69 E-value=7.6e-16 Score=131.64 Aligned_cols=121 Identities=40% Similarity=0.581 Sum_probs=111.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCC
Q 011309 87 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 166 (489)
Q Consensus 87 ~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 166 (489)
.|.||||+|+..|+.+++++|++.+.. .+..+..|.||||.|+..++
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~~~~~---------------------------------~~~~~~~g~~~l~~a~~~~~ 52 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLENGAD---------------------------------VNAKDNDGRTPLHLAAKNGH 52 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCC---------------------------------CCccCCCCCcHHHHHHHcCC
Confidence 799999999999999999999976532 36778899999999999999
Q ss_pred HHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHH
Q 011309 167 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 246 (489)
Q Consensus 167 ~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~ 246 (489)
.+++++|++.|++++..+.. |.||+|+|+..++.+++++|+.+|.+++..|..|.||+++|+..++.+++
T Consensus 53 ~~~~~~ll~~~~~~~~~~~~----------~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 122 (126)
T cd00204 53 LEIVKLLLEKGADVNARDKD----------GNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVV 122 (126)
T ss_pred HHHHHHHHHcCCCccccCCC----------CCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHH
Confidence 99999999999988877755 88999999999999999999999999999999999999999999999998
Q ss_pred HHhc
Q 011309 247 PLLA 250 (489)
Q Consensus 247 ~LL~ 250 (489)
++|.
T Consensus 123 ~~Ll 126 (126)
T cd00204 123 KLLL 126 (126)
T ss_pred HHhC
Confidence 8874
No 72
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.69 E-value=2.3e-16 Score=129.10 Aligned_cols=84 Identities=43% Similarity=0.623 Sum_probs=77.6
Q ss_pred HHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHH
Q 011309 14 LVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALH 93 (489)
Q Consensus 14 L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh 93 (489)
||+|++.|+++++++|++.+.+++. |+||||+|+..|+.+++++|+++|++++.+|. .|+||||
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~----------~g~t~L~ 64 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLENGADINSQDK----------NGNTALH 64 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BST----------TSSBHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHhcccccccCC----------CCCCHHH
Confidence 7999999999999999999987766 38999999999999999999999999999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHccCC
Q 011309 94 FAAVNGHVRCIRLVVADFVP 113 (489)
Q Consensus 94 ~Aa~~g~~~~vk~LL~~~~~ 113 (489)
+|+.+|+.+++++|++.+.+
T Consensus 65 ~A~~~~~~~~~~~Ll~~g~~ 84 (89)
T PF12796_consen 65 YAAENGNLEIVKLLLEHGAD 84 (89)
T ss_dssp HHHHTTHHHHHHHHHHTTT-
T ss_pred HHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999987654
No 73
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.67 E-value=1.5e-15 Score=129.87 Aligned_cols=120 Identities=49% Similarity=0.720 Sum_probs=106.6
Q ss_pred CchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCcccccccc
Q 011309 45 LNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQI 124 (489)
Q Consensus 45 g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~ 124 (489)
|.||||+|+..|+.+++++|++.|.+.+..+. .|.||||+|+..++.+++++|+..+.
T Consensus 7 g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~----------~g~~~l~~a~~~~~~~~~~~ll~~~~------------ 64 (126)
T cd00204 7 GRTPLHLAASNGHLEVVKLLLENGADVNAKDN----------DGRTPLHLAAKNGHLEIVKLLLEKGA------------ 64 (126)
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCccCC----------CCCcHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 48999999999999999999999999888887 89999999999999999999997642
Q ss_pred ccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHH
Q 011309 125 EGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFA 204 (489)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~A 204 (489)
.++..+..|.||+|+|+..++.+++++|++.|.+++..+.. |.|||++|
T Consensus 65 ---------------------~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~----------~~~~l~~~ 113 (126)
T cd00204 65 ---------------------DVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKD----------GRTPLHLA 113 (126)
T ss_pred ---------------------CccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCC----------CCCHHHHH
Confidence 15666778889999999999999999999999888888865 88999999
Q ss_pred HHcCCHHHHHHHH
Q 011309 205 ACGGNLKCCQVLL 217 (489)
Q Consensus 205 a~~g~~eivk~LL 217 (489)
...++.+++++|+
T Consensus 114 ~~~~~~~~~~~Ll 126 (126)
T cd00204 114 AKNGHLEVVKLLL 126 (126)
T ss_pred HhcCCHHHHHHhC
Confidence 9999999999885
No 74
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.65 E-value=1.2e-15 Score=163.12 Aligned_cols=166 Identities=33% Similarity=0.353 Sum_probs=140.3
Q ss_pred chHHHHHHHH---cCCHHHHHHHhhcCCCCc---ccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCc-cc
Q 011309 10 SGERLVSAAR---DGDFVEAKMLLDCNPCLA---KYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQV-TR 82 (489)
Q Consensus 10 s~t~L~~Aa~---~G~~~~Vk~LL~~g~~l~---~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i-~~ 82 (489)
.+|-||.|.. .++.++++.||+.-+.+. ..+....|.||||+|+.+.+.++|++||+.||||+.+-. |.. ..
T Consensus 143 GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~-G~FF~~ 221 (782)
T KOG3676|consen 143 GETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARAC-GAFFCP 221 (782)
T ss_pred hhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhh-ccccCc
Confidence 3678999987 466689999999876543 223344569999999999999999999999999998753 331 11
Q ss_pred ----cc---------CCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhcc
Q 011309 83 ----AD---------YLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNK 149 (489)
Q Consensus 83 ----~d---------~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~ 149 (489)
.. ...|..||-+||..++.+|+++|++.+++ ++.
T Consensus 222 ~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd---------------------------------~~a 268 (782)
T KOG3676|consen 222 DDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGAD---------------------------------PNA 268 (782)
T ss_pred ccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCC---------------------------------CCc
Confidence 11 34789999999999999999999987655 899
Q ss_pred ccCCCccHHHHHHHcCCHHHHHHHHhcCCC--cccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 011309 150 AADGGITALHMAALNGYFDCVQLLLDLHAN--VSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSR 219 (489)
Q Consensus 150 ~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gad--vn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~ 219 (489)
+|..|+|.||+-+.+-..++.++++++|++ ...++.. |-|||.+|+.-|+.++.+.+++.
T Consensus 269 qDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~q----------gLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 269 QDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQ----------GLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred cccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccC----------CCChHHHHHHhhhHHHHHHHHHh
Confidence 999999999999999999999999999999 6666665 99999999999999999999987
No 75
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.60 E-value=1.4e-14 Score=136.49 Aligned_cols=126 Identities=40% Similarity=0.556 Sum_probs=116.2
Q ss_pred CchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCC-----HHHHHHHHHccCCCCCccc
Q 011309 45 LNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGH-----VRCIRLVVADFVPSVPFEV 119 (489)
Q Consensus 45 g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~-----~~~vk~LL~~~~~~~~~~~ 119 (489)
+.+++|.|+..+..+++++|++.|++++.+|. .|.||||+|+..++ .+++++|++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~------ 136 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLLLASGADVNAKDA----------DGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD------ 136 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHHHHcCCCcccccC----------CCCcHHHHHHhcCCcccchHHHHHHHHHcCCC------
Confidence 37999999999999999999999999999998 99999999999999 9999999987652
Q ss_pred cccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCc
Q 011309 120 MNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGST 199 (489)
Q Consensus 120 ~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~T 199 (489)
....+.+|..|.||||+|+..|+.+++++|++.|++++..+.. |.|
T Consensus 137 ------------------------~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~----------g~t 182 (235)
T COG0666 137 ------------------------LDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSY----------GVT 182 (235)
T ss_pred ------------------------CCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccC----------CCc
Confidence 1126777999999999999999999999999999999998766 999
Q ss_pred HHHHHHHcCCHHHHHHHHHcC
Q 011309 200 PLHFAACGGNLKCCQVLLSRG 220 (489)
Q Consensus 200 pLh~Aa~~g~~eivk~LL~~G 220 (489)
+|++|+..++.++++.|++.+
T Consensus 183 ~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 183 ALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred chhhhcccchHHHHHHHHhcC
Confidence 999999999999999999976
No 76
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.59 E-value=3.7e-15 Score=119.30 Aligned_cols=90 Identities=24% Similarity=0.436 Sum_probs=82.2
Q ss_pred HHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChH
Q 011309 12 ERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTA 91 (489)
Q Consensus 12 t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~Tp 91 (489)
..+.+++++|.++.|+..+..|-+++.. . +|++|||+||-.|+++++++|+..||+++.+|+ +|-||
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~--~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDK----------ygITP 70 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEI--Y-GGRTPLHYAADYGQLSILEFLISIGANIQDKDK----------YGITP 70 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHH--h-CCcccchHhhhcchHHHHHHHHHhccccCCccc----------cCCcH
Confidence 5699999999999999999999666543 3 459999999999999999999999999999998 99999
Q ss_pred HHHHHHcCCHHHHHHHHHccCCC
Q 011309 92 LHFAAVNGHVRCIRLVVADFVPS 114 (489)
Q Consensus 92 Lh~Aa~~g~~~~vk~LL~~~~~~ 114 (489)
|.-|+..||.+||++||+.+++.
T Consensus 71 LLsAvwEGH~~cVklLL~~GAdr 93 (117)
T KOG4214|consen 71 LLSAVWEGHRDCVKLLLQNGADR 93 (117)
T ss_pred HHHHHHHhhHHHHHHHHHcCccc
Confidence 99999999999999999988753
No 77
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.56 E-value=1.6e-13 Score=129.25 Aligned_cols=124 Identities=38% Similarity=0.463 Sum_probs=113.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCC
Q 011309 87 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 166 (489)
Q Consensus 87 ~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 166 (489)
.+.+++|.|+..+..+++++|+..+.+ ++.++..|.||||+|+..++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------------------------~~~~~~~g~t~l~~a~~~~~ 118 (235)
T COG0666 72 DGRLPLHSAASKGDDKIVKLLLASGAD---------------------------------VNAKDADGDTPLHLAALNGN 118 (235)
T ss_pred cccCHHHHHHHcCcHHHHHHHHHcCCC---------------------------------cccccCCCCcHHHHHHhcCC
Confidence 689999999999999999999977654 78899999999999999999
Q ss_pred -----HHHHHHHHhcCC---CcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Q 011309 167 -----FDCVQLLLDLHA---NVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVAR 238 (489)
Q Consensus 167 -----~e~v~~LL~~Ga---dvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~ 238 (489)
.+++++|++.|+ ..+..+.. |.||||+|+..|+.+++++|++.|++++.++..|.|+++.|.
T Consensus 119 ~~~~~~~~~~~ll~~g~~~~~~~~~~~~----------g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~ 188 (235)
T COG0666 119 PPEGNIEVAKLLLEAGADLDVNNLRDED----------GNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAA 188 (235)
T ss_pred cccchHHHHHHHHHcCCCCCCccccCCC----------CCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhc
Confidence 999999999999 44444655 999999999999999999999999999999999999999999
Q ss_pred HcCcHhHHHHhcCCC
Q 011309 239 MWGRHWLEPLLAPSS 253 (489)
Q Consensus 239 ~~g~~~i~~LL~~~~ 253 (489)
..++..++.+|....
T Consensus 189 ~~~~~~~~~~l~~~~ 203 (235)
T COG0666 189 KNGRIELVKLLLDKG 203 (235)
T ss_pred ccchHHHHHHHHhcC
Confidence 999999988887754
No 78
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.53 E-value=3.2e-14 Score=113.94 Aligned_cols=95 Identities=27% Similarity=0.385 Sum_probs=86.4
Q ss_pred HHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccc
Q 011309 48 PLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGD 127 (489)
Q Consensus 48 pLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~ 127 (489)
-+.|++++|..+-|+..+..|.++|..- .|++|||||+.+|+.+++++|+..++.
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-----------ggR~plhyAAD~GQl~ilefli~iGA~-------------- 59 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-----------GGRTPLHYAADYGQLSILEFLISIGAN-------------- 59 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHh-----------CCcccchHhhhcchHHHHHHHHHhccc--------------
Confidence 4789999999999999999998888764 699999999999999999999977654
Q ss_pred cCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCccccccc
Q 011309 128 RGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFH 186 (489)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~ 186 (489)
++.+|++|.|||.-|+..||.++|++||+.||+-......
T Consensus 60 -------------------i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~Pd 99 (117)
T KOG4214|consen 60 -------------------IQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPD 99 (117)
T ss_pred -------------------cCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCC
Confidence 8999999999999999999999999999999998776654
No 79
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.49 E-value=1.6e-13 Score=130.94 Aligned_cols=125 Identities=27% Similarity=0.357 Sum_probs=112.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCH
Q 011309 88 GRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYF 167 (489)
Q Consensus 88 G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~ 167 (489)
-..||.-|+..|..+-...||+. .+.+|..|..|+|+|..|+..|+.
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~---------------------------------vr~vn~~D~sGMs~LahAaykGnl 58 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLST---------------------------------VRQVNQRDPSGMSVLAHAAYKGNL 58 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHH---------------------------------hhhhhccCCCcccHHHHHHhcCcH
Confidence 45789999999999988888853 233899999999999999999999
Q ss_pred HHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHH
Q 011309 168 DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEP 247 (489)
Q Consensus 168 e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~ 247 (489)
++|++||++|+|||..... .+.||||+|+..|+.++.++||+.|+.....|.-|+|+-.+|+.-|+.+++.
T Consensus 59 ~~v~lll~~gaDvN~~qhg---------~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~ 129 (396)
T KOG1710|consen 59 TLVELLLELGADVNDKQHG---------TLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVA 129 (396)
T ss_pred HHHHHHHHhCCCcCccccc---------ccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHH
Confidence 9999999999999986532 5899999999999999999999999999999999999999999999999988
Q ss_pred HhcCCCC
Q 011309 248 LLAPSSD 254 (489)
Q Consensus 248 LL~~~~~ 254 (489)
.+.+.-.
T Consensus 130 iINN~~t 136 (396)
T KOG1710|consen 130 IINNHIT 136 (396)
T ss_pred HHhcccc
Confidence 8876643
No 80
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.44 E-value=8.4e-14 Score=104.09 Aligned_cols=55 Identities=38% Similarity=0.504 Sum_probs=33.1
Q ss_pred HHhcC-CCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHH
Q 011309 173 LLDLH-ANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVA 237 (489)
Q Consensus 173 LL~~G-advn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A 237 (489)
||++| ++++..|.. |.||||+|+..|+.++|++|++.|+|++.+|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~----------G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKY----------GNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TT----------S--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCC----------CCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 67888 899999977 99999999999999999999999999999999999999998
No 81
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.43 E-value=7.5e-13 Score=146.60 Aligned_cols=106 Identities=26% Similarity=0.296 Sum_probs=96.9
Q ss_pred hHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHH
Q 011309 90 TALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDC 169 (489)
Q Consensus 90 TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~ 169 (489)
+.|+.|+..|+.+++++|++.+.+ +|.+|..|.||||+|+.+|+.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gad---------------------------------in~~d~~G~TpLh~Aa~~g~~ei 130 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGAD---------------------------------PNCRDYDGRTPLHIACANGHVQV 130 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC---------------------------------CCCcCCCCCcHHHHHHHCCCHHH
Confidence 468999999999999999987544 78889999999999999999999
Q ss_pred HHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc-------CCCCCccCCCCCcHHHHHH
Q 011309 170 VQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSR-------GASRMSLNCNGWLPLDVAR 238 (489)
Q Consensus 170 v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~-------Gadvn~~d~~G~TpL~~A~ 238 (489)
|++|+++|++++..|.. |.||||+|+..|+.+++++|+++ |++++..+..|++|+..+.
T Consensus 131 v~~LL~~Gadvn~~d~~----------G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 131 VRVLLEFGADPTLLDKD----------GKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHCCCCCCCCCCC----------CCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 99999999999999976 99999999999999999999999 9999999998888876664
No 82
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.41 E-value=4.4e-13 Score=99.29 Aligned_cols=54 Identities=48% Similarity=0.835 Sum_probs=46.4
Q ss_pred CchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHH
Q 011309 45 LNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVV 108 (489)
Q Consensus 45 g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL 108 (489)
|+||||+|++.|+.+++++|+++|+|+|.+|. +|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~----------~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDE----------DGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-T----------TS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCC----------CCCCHHHHHHHccCHHHHHHHC
Confidence 58999999999999999999999999999998 9999999999999999999996
No 83
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.38 E-value=1.7e-12 Score=143.85 Aligned_cols=97 Identities=37% Similarity=0.488 Sum_probs=89.3
Q ss_pred hHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCcccccccccc
Q 011309 47 SPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEG 126 (489)
Q Consensus 47 TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~ 126 (489)
+.|+.|+..|+.++|++|+++|+++|.+|. .|+||||+|+.+|+.+++++|++.+.+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~----------~G~TpLh~Aa~~g~~eiv~~LL~~Gad------------- 140 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDY----------DGRTPLHIACANGHVQVVRVLLEFGAD------------- 140 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCC----------CCCcHHHHHHHCCCHHHHHHHHHCCCC-------------
Confidence 468999999999999999999999999998 999999999999999999999987654
Q ss_pred ccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhc-------CCCccccccc
Q 011309 127 DRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDL-------HANVSAVTFH 186 (489)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~-------Gadvn~~~~~ 186 (489)
++.+|..|.||||+|+..|+.+++++|+++ |++++..+..
T Consensus 141 --------------------vn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~ 187 (664)
T PTZ00322 141 --------------------PTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFT 187 (664)
T ss_pred --------------------CCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccC
Confidence 788899999999999999999999999998 8888776654
No 84
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.35 E-value=1.5e-12 Score=96.43 Aligned_cols=54 Identities=37% Similarity=0.504 Sum_probs=46.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhc
Q 011309 197 GSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLA 250 (489)
Q Consensus 197 G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~ 250 (489)
|.||||+|+..|+.+++++|+++|+|++.+|.+|+||||+|++.|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 679999999999999999999999999999999999999999999999999874
No 85
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.34 E-value=7.3e-12 Score=119.64 Aligned_cols=124 Identities=33% Similarity=0.351 Sum_probs=106.6
Q ss_pred CchHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCC
Q 011309 9 ASGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSG 88 (489)
Q Consensus 9 ~s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G 88 (489)
+...+|..|+..|+.+....||+.-..++..+..| .|+|..|+.+|+.++|++||+.|+|+|.... ..+
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sG--Ms~LahAaykGnl~~v~lll~~gaDvN~~qh---------g~~ 79 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSG--MSVLAHAAYKGNLTLVELLLELGADVNDKQH---------GTL 79 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCc--ccHHHHHHhcCcHHHHHHHHHhCCCcCcccc---------ccc
Confidence 34568999999999999999999866677666655 9999999999999999999999999997654 278
Q ss_pred ChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHH
Q 011309 89 RTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFD 168 (489)
Q Consensus 89 ~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e 168 (489)
.||||+|+..|+.++.++|++.|+. ....+.-|.|+-.+||.-|+-+
T Consensus 80 YTpLmFAALSGn~dvcrllldaGa~---------------------------------~~~vNsvgrTAaqmAAFVG~H~ 126 (396)
T KOG1710|consen 80 YTPLMFAALSGNQDVCRLLLDAGAR---------------------------------MYLVNSVGRTAAQMAAFVGHHE 126 (396)
T ss_pred ccHHHHHHHcCCchHHHHHHhccCc---------------------------------cccccchhhhHHHHHHHhcchH
Confidence 9999999999999999999988764 4445567899999999999999
Q ss_pred HHHHHHhc
Q 011309 169 CVQLLLDL 176 (489)
Q Consensus 169 ~v~~LL~~ 176 (489)
+|..+-++
T Consensus 127 CV~iINN~ 134 (396)
T KOG1710|consen 127 CVAIINNH 134 (396)
T ss_pred HHHHHhcc
Confidence 98876433
No 86
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=1.1e-11 Score=126.47 Aligned_cols=94 Identities=31% Similarity=0.391 Sum_probs=78.4
Q ss_pred hccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcc
Q 011309 147 VNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSL 226 (489)
Q Consensus 147 in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~ 226 (489)
....++.|.|+||-|+..||.+||++||+.|++||+.|.+ ||||||.|+..+++.+++.|++.|+-+-+.
T Consensus 576 pSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSd----------GWTPLHCAASCNnv~~ckqLVe~GaavfAs 645 (752)
T KOG0515|consen 576 PSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSD----------GWTPLHCAASCNNVPMCKQLVESGAAVFAS 645 (752)
T ss_pred CCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCC----------CCchhhhhhhcCchHHHHHHHhccceEEee
Confidence 5567789999999999999999999999999999999977 999999999999999999999999987554
Q ss_pred -CCCCCcHHHHHH--HcCcHhHHHHhc
Q 011309 227 -NCNGWLPLDVAR--MWGRHWLEPLLA 250 (489)
Q Consensus 227 -d~~G~TpL~~A~--~~g~~~i~~LL~ 250 (489)
=.++.||..-.- ..|+..+.++|.
T Consensus 646 TlSDmeTa~eKCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 646 TLSDMETAAEKCEEMEEGYDQCSQYLY 672 (752)
T ss_pred ecccccchhhhcchhhhhHHHHHHHHH
Confidence 356777766543 346667777764
No 87
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.27 E-value=4.6e-12 Score=94.63 Aligned_cols=55 Identities=47% Similarity=0.825 Sum_probs=31.2
Q ss_pred HhhcC-CCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHH
Q 011309 29 LLDCN-PCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFA 95 (489)
Q Consensus 29 LL~~g-~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~A 95 (489)
||++| .+++..+..+ +||||+|+..|+.++|++||+.|+|++.+|. .|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G--~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~----------~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYG--NTPLHWAARYGHSEVVRLLLQNGADPNAKDK----------DGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS----HHHHHHHHT-HHHHHHHHHCT--TT---T----------TS--HHHH-
T ss_pred CCccCcCCCcCcCCCC--CcHHHHHHHcCcHHHHHHHHHCcCCCCCCcC----------CCCCHHHhC
Confidence 67777 5555555544 9999999999999999999999999999998 999999997
No 88
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=1.2e-11 Score=126.26 Aligned_cols=91 Identities=30% Similarity=0.343 Sum_probs=81.5
Q ss_pred HHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHH
Q 011309 14 LVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALH 93 (489)
Q Consensus 14 L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh 93 (489)
|.-|+..|.+++|+..+..--|....++.| .||||-|+..||.+||++||+.|+|+|..|. +||||||
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEG--ITaLHNAiCaghyeIVkFLi~~ganVNa~DS----------dGWTPLH 621 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEG--ITALHNAICAGHYEIVKFLIEFGANVNAADS----------DGWTPLH 621 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccc--hhHHhhhhhcchhHHHHHHHhcCCcccCccC----------CCCchhh
Confidence 778999999999999999876665555444 9999999999999999999999999999998 9999999
Q ss_pred HHHHcCCHHHHHHHHHccCCCCC
Q 011309 94 FAAVNGHVRCIRLVVADFVPSVP 116 (489)
Q Consensus 94 ~Aa~~g~~~~vk~LL~~~~~~~~ 116 (489)
.|+.-+++.+++.|++.|+....
T Consensus 622 CAASCNnv~~ckqLVe~GaavfA 644 (752)
T KOG0515|consen 622 CAASCNNVPMCKQLVESGAAVFA 644 (752)
T ss_pred hhhhcCchHHHHHHHhccceEEe
Confidence 99999999999999998765433
No 89
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.99 E-value=2.3e-10 Score=122.28 Aligned_cols=93 Identities=28% Similarity=0.295 Sum_probs=85.3
Q ss_pred hhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 011309 144 SKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASR 223 (489)
Q Consensus 144 ~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadv 223 (489)
..+.|.+|..|.|+||+|+..+..+++++||++|++++.+|.. +|+||||.|+..|++|++-+||.+|+.+
T Consensus 42 ~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~E---------SG~taLHRaiyyG~idca~lLL~~g~SL 112 (1267)
T KOG0783|consen 42 QNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEE---------SGYTALHRAIYYGNIDCASLLLSKGRSL 112 (1267)
T ss_pred hhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeecccc---------ccchHhhHhhhhchHHHHHHHHhcCCce
Confidence 3458999999999999999999999999999999999999987 6999999999999999999999999999
Q ss_pred CccCCCCCcHHHHHHHcCcHhH
Q 011309 224 MSLNCNGWLPLDVARMWGRHWL 245 (489)
Q Consensus 224 n~~d~~G~TpL~~A~~~g~~~i 245 (489)
.++|++|..||+.-.+-....+
T Consensus 113 ~i~Dkeglsplq~~~r~~~~~i 134 (1267)
T KOG0783|consen 113 RIKDKEGLSPLQFLSRVLSSTI 134 (1267)
T ss_pred EEecccCCCHHHHHhhcccccc
Confidence 9999999999998887443333
No 90
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.96 E-value=1.7e-09 Score=110.00 Aligned_cols=91 Identities=32% Similarity=0.415 Sum_probs=82.9
Q ss_pred hccccCCCccH------HHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 011309 147 VNKAADGGITA------LHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRG 220 (489)
Q Consensus 147 in~~d~~G~Tp------Lh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~G 220 (489)
...+|++|.|. ||-.++.|+.+..--||..||++|..+.. .|.||||+|++.|+.--+++|+-+|
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpe---------kg~TpLHvAAk~Gq~~Q~ElL~vYG 190 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPE---------KGNTPLHVAAKAGQILQAELLAVYG 190 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcc---------cCCchhHHHHhccchhhhhHHhhcc
Confidence 45677787764 99999999999998899999999998876 5999999999999999999999999
Q ss_pred CCCCccCCCCCcHHHHHHHcCcHhHH
Q 011309 221 ASRMSLNCNGWLPLDVARMWGRHWLE 246 (489)
Q Consensus 221 advn~~d~~G~TpL~~A~~~g~~~i~ 246 (489)
||+++.|.+|.||+.||...||.++.
T Consensus 191 AD~~a~d~~GmtP~~~AR~~gH~~la 216 (669)
T KOG0818|consen 191 ADPGAQDSSGMTPVDYARQGGHHELA 216 (669)
T ss_pred CCCCCCCCCCCcHHHHHHhcCchHHH
Confidence 99999999999999999999998654
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.79 E-value=4.7e-09 Score=106.46 Aligned_cols=86 Identities=28% Similarity=0.344 Sum_probs=80.9
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHc-CCCCCCcCCCCCcccccCCCCChH
Q 011309 13 RLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLEN-GADVNSRNYCGQVTRADYLSGRTA 91 (489)
Q Consensus 13 ~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~-Gad~n~~d~~g~i~~~d~~~G~Tp 91 (489)
++++|++.||+..++.+.-.|.++...+.+. +|+||+||..|+.+++|+||+. +.+++.+|+ .|+||
T Consensus 509 ~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~--RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDR----------w~rtP 576 (622)
T KOG0506|consen 509 NVMYAAKNGDLSALRRFALQGMDLETKDYDD--RTALHVAAAEGHVEVVKFLLNACKVDPDPKDR----------WGRTP 576 (622)
T ss_pred hhhhhhhcCCHHHHHHHHHhccccccccccc--chhheeecccCceeHHHHHHHHHcCCCChhhc----------cCCCc
Confidence 7999999999999999999999998877776 9999999999999999999985 899999998 89999
Q ss_pred HHHHHHcCCHHHHHHHHHc
Q 011309 92 LHFAAVNGHVRCIRLVVAD 110 (489)
Q Consensus 92 Lh~Aa~~g~~~~vk~LL~~ 110 (489)
|.-|...+|.+++++|-+.
T Consensus 577 lDdA~~F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 577 LDDAKHFKHKEVVKLLEEA 595 (622)
T ss_pred chHhHhcCcHHHHHHHHHH
Confidence 9999999999999999864
No 92
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.71 E-value=1e-08 Score=104.00 Aligned_cols=96 Identities=20% Similarity=0.251 Sum_probs=87.8
Q ss_pred ccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCccCC
Q 011309 150 AADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS-RGASRMSLNC 228 (489)
Q Consensus 150 ~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~-~Gadvn~~d~ 228 (489)
++.++.-.+++|++.|++..++-+.-.|.|++..|.+ .+|+||+||..|+++++++||+ .+.|++.+|.
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD----------~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDR 571 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYD----------DRTALHVAAAEGHVEVVKFLLNACKVDPDPKDR 571 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccc----------cchhheeecccCceeHHHHHHHHHcCCCChhhc
Confidence 3456778999999999999999999899999999977 8999999999999999999997 5999999999
Q ss_pred CCCcHHHHHHHcCcHhHHHHhcCCCCC
Q 011309 229 NGWLPLDVARMWGRHWLEPLLAPSSDA 255 (489)
Q Consensus 229 ~G~TpL~~A~~~g~~~i~~LL~~~~~~ 255 (489)
.|+|||.-|...+|.+++++|.+....
T Consensus 572 w~rtPlDdA~~F~h~~v~k~L~~~~~~ 598 (622)
T KOG0506|consen 572 WGRTPLDDAKHFKHKEVVKLLEEAQYP 598 (622)
T ss_pred cCCCcchHhHhcCcHHHHHHHHHHhcc
Confidence 999999999999999999999876553
No 93
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.69 E-value=8e-08 Score=99.27 Aligned_cols=121 Identities=26% Similarity=0.269 Sum_probs=107.1
Q ss_pred hHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCC--CCCcCCCCCcccccCCCC
Q 011309 11 GERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGAD--VNSRNYCGQVTRADYLSG 88 (489)
Q Consensus 11 ~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad--~n~~d~~g~i~~~d~~~G 88 (489)
++.|..|+..+|+-.++.+...|.++..+..+. .|.||+|+..|+-|||+|+|++|.. ++..|. .|
T Consensus 867 seeil~av~~~D~~klqE~h~~gg~ll~~~~~~--~sllh~a~~tg~~eivkyildh~p~elld~~de----------~g 934 (1004)
T KOG0782|consen 867 SEEILRAVLSSDLMKLQETHLNGGSLLIQGPDH--CSLLHYAAKTGNGEIVKYILDHGPSELLDMADE----------TG 934 (1004)
T ss_pred cHHHHHHHHhccHHHHHHHHhcCCceEeeCcch--hhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhh----------hh
Confidence 456899999999999999999999988888777 8999999999999999999999854 455555 89
Q ss_pred ChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHH
Q 011309 89 RTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFD 168 (489)
Q Consensus 89 ~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e 168 (489)
.|+||.|+..++-.+.++|++.++. +...|..|.||-..|-+.|+.+
T Consensus 935 et~lhkaa~~~~r~vc~~lvdagas---------------------------------l~ktd~kg~tp~eraqqa~d~d 981 (1004)
T KOG0782|consen 935 ETALHKAACQRNRAVCQLLVDAGAS---------------------------------LRKTDSKGKTPQERAQQAGDPD 981 (1004)
T ss_pred hHHHHHHHHhcchHHHHHHHhcchh---------------------------------heecccCCCChHHHHHhcCCch
Confidence 9999999999999999999987653 7788999999999999999999
Q ss_pred HHHHHHhc
Q 011309 169 CVQLLLDL 176 (489)
Q Consensus 169 ~v~~LL~~ 176 (489)
+..||-..
T Consensus 982 laayle~r 989 (1004)
T KOG0782|consen 982 LAAYLESR 989 (1004)
T ss_pred HHHHHhhh
Confidence 99998643
No 94
>PF13606 Ank_3: Ankyrin repeat
Probab=98.69 E-value=2.1e-08 Score=64.73 Aligned_cols=29 Identities=62% Similarity=0.891 Sum_probs=27.3
Q ss_pred CchHHHHHHHhCcHHHHHHHHHcCCCCCC
Q 011309 45 LNSPLHFAAAKGHNEIVALLLENGADVNS 73 (489)
Q Consensus 45 g~TpLh~Aa~~G~~eivk~LLe~Gad~n~ 73 (489)
|+||||+|++.|+.|+|++||++|+|+|.
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 59999999999999999999999999974
No 95
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.68 E-value=7.3e-08 Score=98.38 Aligned_cols=87 Identities=29% Similarity=0.348 Sum_probs=81.6
Q ss_pred HHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChH
Q 011309 12 ERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTA 91 (489)
Q Consensus 12 t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~Tp 91 (489)
..||..++.|+++.--.||..|++.+.+.... |.||||+|++.|+.--+++|+-.|||++..|. +|+||
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~N~~hpek-g~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~----------~GmtP 203 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEK-GNTPLHVAAKAGQILQAELLAVYGADPGAQDS----------SGMTP 203 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHcccccCCCCccc-CCchhHHHHhccchhhhhHHhhccCCCCCCCC----------CCCcH
Confidence 47999999999999999999999999887655 49999999999999999999999999999998 99999
Q ss_pred HHHHHHcCCHHHHHHHHH
Q 011309 92 LHFAAVNGHVRCIRLVVA 109 (489)
Q Consensus 92 Lh~Aa~~g~~~~vk~LL~ 109 (489)
+.||-..||-++.+.|++
T Consensus 204 ~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 204 VDYARQGGHHELAERLVE 221 (669)
T ss_pred HHHHHhcCchHHHHHHHH
Confidence 999999999999988885
No 96
>PF13606 Ank_3: Ankyrin repeat
Probab=98.66 E-value=3e-08 Score=64.03 Aligned_cols=29 Identities=45% Similarity=0.733 Sum_probs=27.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCc
Q 011309 197 GSTPLHFAACGGNLKCCQVLLSRGASRMS 225 (489)
Q Consensus 197 G~TpLh~Aa~~g~~eivk~LL~~Gadvn~ 225 (489)
|+||||+|+..|+.|+|++||++|+|+|+
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 89999999999999999999999999974
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.66 E-value=1.6e-08 Score=108.40 Aligned_cols=101 Identities=24% Similarity=0.346 Sum_probs=78.9
Q ss_pred HcCCHHHHHHHhhc-CCCC-cccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHH
Q 011309 19 RDGDFVEAKMLLDC-NPCL-AKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAA 96 (489)
Q Consensus 19 ~~G~~~~Vk~LL~~-g~~l-~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa 96 (489)
..|...-++.++++ +.++ +..+.+| +|+||+|+..|..++++|||++|+|++.+|+ ..|+||||-|+
T Consensus 26 tKs~~Nqlk~F~~k~c~n~anikD~~G--R~alH~~~S~~k~~~l~wLlqhGidv~vqD~---------ESG~taLHRai 94 (1267)
T KOG0783|consen 26 TKSEPNQLKGFSEKSCQNLANIKDRYG--RTALHIAVSENKNSFLRWLLQHGIDVFVQDE---------ESGYTALHRAI 94 (1267)
T ss_pred hcCChhHHHHHHHHhhhhhhhHHHhhc--cceeeeeeccchhHHHHHHHhcCceeeeccc---------cccchHhhHhh
Confidence 33444346666654 3333 3333444 9999999999999999999999999999997 48999999999
Q ss_pred HcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHH
Q 011309 97 VNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAAL 163 (489)
Q Consensus 97 ~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~ 163 (489)
++||.+|+-+||..+.. +..+|++|..||..-.+
T Consensus 95 yyG~idca~lLL~~g~S---------------------------------L~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 95 YYGNIDCASLLLSKGRS---------------------------------LRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred hhchHHHHHHHHhcCCc---------------------------------eEEecccCCCHHHHHhh
Confidence 99999999999987643 66677777777776555
No 98
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.64 E-value=4.4e-08 Score=64.70 Aligned_cols=32 Identities=56% Similarity=0.977 Sum_probs=30.1
Q ss_pred CchHHHHHHHhCcHHHHHHHHHcCCCCCCcCC
Q 011309 45 LNSPLHFAAAKGHNEIVALLLENGADVNSRNY 76 (489)
Q Consensus 45 g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~ 76 (489)
|+||||+|+..|+.+++++||++|++++.+|+
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 59999999999999999999999999998873
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.63 E-value=4.7e-08 Score=64.53 Aligned_cols=32 Identities=38% Similarity=0.576 Sum_probs=30.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Q 011309 197 GSTPLHFAACGGNLKCCQVLLSRGASRMSLNC 228 (489)
Q Consensus 197 G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~ 228 (489)
|.||||+|+..|+.++|++||++|++++.+|+
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 89999999999999999999999999999874
No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.62 E-value=1e-07 Score=99.00 Aligned_cols=95 Identities=32% Similarity=0.434 Sum_probs=85.4
Q ss_pred hHHHHHHHHcCCHHHHHHHhhcCCCC--cccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCC
Q 011309 11 GERLVSAARDGDFVEAKMLLDCNPCL--AKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSG 88 (489)
Q Consensus 11 ~t~L~~Aa~~G~~~~Vk~LL~~g~~l--~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G 88 (489)
+..|..|+...|+..+-.||.+|... +.....++|.|+||+|++.|+..+.++|+=+|+|+..+|. +|
T Consensus 625 gqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda----------~g 694 (749)
T KOG0705|consen 625 GQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDA----------HG 694 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceeccc----------CC
Confidence 45799999999999999999998664 4444566779999999999999999999999999999998 99
Q ss_pred ChHHHHHHHcCCHHHHHHHHHccCCCC
Q 011309 89 RTALHFAAVNGHVRCIRLVVADFVPSV 115 (489)
Q Consensus 89 ~TpLh~Aa~~g~~~~vk~LL~~~~~~~ 115 (489)
+|+|.||-+.|.-+|+..|++.|.+..
T Consensus 695 ~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 695 RTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred chhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 999999999999999999999887644
No 101
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.59 E-value=1.7e-07 Score=96.87 Aligned_cols=120 Identities=24% Similarity=0.235 Sum_probs=103.0
Q ss_pred HHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCcccccccccccc
Q 011309 49 LHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDR 128 (489)
Q Consensus 49 Lh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~ 128 (489)
|.-|+..+.+--++.+..+|-++-.++. +..|.||||+..|+-++|+|||+++..
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~----------~~~sllh~a~~tg~~eivkyildh~p~--------------- 924 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGP----------DHCSLLHYAAKTGNGEIVKYILDHGPS--------------- 924 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCc----------chhhHHHHHHhcCChHHHHHHHhcCCH---------------
Confidence 4556666666556666677888888887 889999999999999999999987532
Q ss_pred CCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcC
Q 011309 129 GDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGG 208 (489)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g 208 (489)
.+++..|..|.|+||.|+..++..+.++|++.|+.+...|.. |.||-..|-..|
T Consensus 925 ----------------elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~k----------g~tp~eraqqa~ 978 (1004)
T KOG0782|consen 925 ----------------ELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSK----------GKTPQERAQQAG 978 (1004)
T ss_pred ----------------HHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccC----------CCChHHHHHhcC
Confidence 347888899999999999999999999999999999988876 999999999999
Q ss_pred CHHHHHHHHHc
Q 011309 209 NLKCCQVLLSR 219 (489)
Q Consensus 209 ~~eivk~LL~~ 219 (489)
..+...||-.+
T Consensus 979 d~dlaayle~r 989 (1004)
T KOG0782|consen 979 DPDLAAYLESR 989 (1004)
T ss_pred CchHHHHHhhh
Confidence 99999998643
No 102
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.57 E-value=2.1e-07 Score=101.15 Aligned_cols=85 Identities=21% Similarity=0.227 Sum_probs=55.6
Q ss_pred CchHHHHHHHHcCCHHHHHHHhhcCCC--CcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCC
Q 011309 9 ASGERLVSAARDGDFVEAKMLLDCNPC--LAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYL 86 (489)
Q Consensus 9 ~s~t~L~~Aa~~G~~~~Vk~LL~~g~~--l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~ 86 (489)
.++..+..|+..||+..|+..++.... ++....+.-|+++|++|+.+.|.|++++|++++..+ .
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--g------------ 89 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--G------------ 89 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--c------------
Confidence 345567777777777777777765433 443333444477777777777777777777765444 2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHc
Q 011309 87 SGRTALHFAAVNGHVRCIRLVVAD 110 (489)
Q Consensus 87 ~G~TpLh~Aa~~g~~~~vk~LL~~ 110 (489)
.+|.+|+..|.+++|++++.+
T Consensus 90 ---dALL~aI~~~~v~~VE~ll~~ 110 (822)
T KOG3609|consen 90 ---DALLLAIAVGSVPLVELLLVH 110 (822)
T ss_pred ---hHHHHHHHHHHHHHHHHHHhc
Confidence 367777777777777777754
No 103
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.53 E-value=1.5e-07 Score=97.22 Aligned_cols=81 Identities=30% Similarity=0.391 Sum_probs=69.0
Q ss_pred cHHHHHHHcCCHHHHHHHH--hcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcH
Q 011309 156 TALHMAALNGYFDCVQLLL--DLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLP 233 (489)
Q Consensus 156 TpLh~Aa~~g~~e~v~~LL--~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~Tp 233 (489)
-|||+++.....+-++.++ +.+..++..|.. |.||||+|+..|+.+.++.|+.+|||+..+|++||+|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~----------g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~ 91 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPP----------GRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSP 91 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCC----------CCccHHHHHHhcCHHHHHHHHhcCCCccccccccccH
Confidence 4699999988777665433 445667777765 9999999999999999999999999999999999999
Q ss_pred HHHHHHcCcHhHH
Q 011309 234 LDVARMWGRHWLE 246 (489)
Q Consensus 234 L~~A~~~g~~~i~ 246 (489)
||-|+..|+..++
T Consensus 92 L~EAv~~g~~q~i 104 (560)
T KOG0522|consen 92 LHEAVSTGNEQII 104 (560)
T ss_pred HHHHHHcCCHHHH
Confidence 9999999998654
No 104
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.41 E-value=7.2e-07 Score=92.81 Aligned_cols=92 Identities=26% Similarity=0.226 Sum_probs=78.6
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCc--ccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcH
Q 011309 156 TALHMAALNGYFDCVQLLLDLHANV--SAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLP 233 (489)
Q Consensus 156 TpLh~Aa~~g~~e~v~~LL~~Gadv--n~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~Tp 233 (489)
.-|..|+...++..+-+||.+|... |..... +.|+|+||+|++.|++.+.++|+=+|+|+.++|.+|+|+
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~--------~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~ 697 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGE--------GDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTA 697 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhhccccC--------CCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchh
Confidence 3477788888899999999998543 333322 358999999999999999999999999999999999999
Q ss_pred HHHHHHcCcHhHHHHhcCCCCC
Q 011309 234 LDVARMWGRHWLEPLLAPSSDA 255 (489)
Q Consensus 234 L~~A~~~g~~~i~~LL~~~~~~ 255 (489)
|.||...|..+++..|+.++-.
T Consensus 698 l~yar~a~sqec~d~llq~gcp 719 (749)
T KOG0705|consen 698 LFYARQAGSQECIDVLLQYGCP 719 (749)
T ss_pred hhhHhhcccHHHHHHHHHcCCC
Confidence 9999999999999888877654
No 105
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.39 E-value=7.3e-07 Score=92.33 Aligned_cols=86 Identities=30% Similarity=0.357 Sum_probs=74.4
Q ss_pred HHHHHHHcCCHHHHHHHhhcC--CCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCCh
Q 011309 13 RLVSAARDGDFVEAKMLLDCN--PCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRT 90 (489)
Q Consensus 13 ~L~~Aa~~G~~~~Vk~LL~~g--~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~T 90 (489)
+||+++...+.+.+..++... ..++..+..+ +||||+|+..|+.+.++.||.+||++..+|+ .||+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g--~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~----------~gWs 90 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPG--RTPLHLAVRLGHVEAARILLSAGADVSIKNN----------EGWS 90 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCC--CccHHHHHHhcCHHHHHHHHhcCCCcccccc----------cccc
Confidence 599999999999888866544 3344555544 8999999999999999999999999999998 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHc
Q 011309 91 ALHFAAVNGHVRCIRLVVAD 110 (489)
Q Consensus 91 pLh~Aa~~g~~~~vk~LL~~ 110 (489)
|||-|+..|+.+++..++.+
T Consensus 91 ~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 91 PLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999888854
No 106
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.38 E-value=1.9e-07 Score=104.01 Aligned_cols=89 Identities=36% Similarity=0.436 Sum_probs=82.5
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Q 011309 152 DGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGW 231 (489)
Q Consensus 152 ~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~ 231 (489)
..|.|+||.|+..|..-++++|++.|+++|..+.. |+||||.+...|+...+.+|+++||+.++.|.+|.
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~----------g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~ 723 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSK----------GRTPLHHATASGHTSIACLLLKRGADPNAFDPDGK 723 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhcc----------CCCcchhhhhhcccchhhhhccccccccccCccCc
Confidence 46889999999999999999999999999999977 99999999999999999999999999999999999
Q ss_pred cHHHHHHHcCcHhHHHHhc
Q 011309 232 LPLDVARMWGRHWLEPLLA 250 (489)
Q Consensus 232 TpL~~A~~~g~~~i~~LL~ 250 (489)
+||++|....+.+++.||.
T Consensus 724 ~~l~~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 724 LPLDIAMEAANADIVLLLR 742 (785)
T ss_pred chhhHHhhhccccHHHHHh
Confidence 9999998887777665553
No 107
>PF13920 zf-C3HC4_3: Zinc finger, C3HC4 type (RING finger); PDB: 2YHN_B 2YHO_G 3T6P_A 2CSY_A 2VJE_B 2VJF_B 2HDP_B 2EA5_A 2ECG_A 3EB5_A ....
Probab=98.18 E-value=6.9e-07 Score=64.91 Aligned_cols=47 Identities=34% Similarity=0.756 Sum_probs=38.9
Q ss_pred cchhhhhhhhcccccccCCcch-hhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccc
Q 011309 293 ADTCAVCLERACTVAAEGCRHE-LCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 351 (489)
Q Consensus 293 ~~~C~iCle~~~~v~~~~C~H~-~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~ 351 (489)
...|.+|++...++...+|||. +|..|+..+-. ....||+||+.|.+
T Consensus 2 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~------------~~~~CP~Cr~~i~~ 49 (50)
T PF13920_consen 2 DEECPICFENPRDVVLLPCGHLCFCEECAERLLK------------RKKKCPICRQPIES 49 (50)
T ss_dssp HSB-TTTSSSBSSEEEETTCEEEEEHHHHHHHHH------------TTSBBTTTTBB-SE
T ss_pred cCCCccCCccCCceEEeCCCChHHHHHHhHHhcc------------cCCCCCcCChhhcC
Confidence 3579999999999999999999 99999999964 22359999999976
No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.12 E-value=9.4e-06 Score=80.92 Aligned_cols=74 Identities=32% Similarity=0.543 Sum_probs=63.2
Q ss_pred HHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChH
Q 011309 12 ERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTA 91 (489)
Q Consensus 12 t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~Tp 91 (489)
..|..|++.||++.|++|++.|.++|..+.+. .+||.+|...||.++|++||++||--+.-.. .|.-+
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD--~spL~lAsLcGHe~vvklLLenGAiC~rdtf----------~G~RC 105 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFD--SSPLYLASLCGHEDVVKLLLENGAICSRDTF----------DGDRC 105 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhhccc--ccHHHHHHHcCcHHHHHHHHHcCCccccccc----------Ccchh
Confidence 35999999999999999999999999999998 8999999999999999999999986654433 66666
Q ss_pred HHHHHHc
Q 011309 92 LHFAAVN 98 (489)
Q Consensus 92 Lh~Aa~~ 98 (489)
+ |++.+
T Consensus 106 ~-YgaLn 111 (516)
T KOG0511|consen 106 H-YGALN 111 (516)
T ss_pred h-hhhhh
Confidence 4 44443
No 109
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.94 E-value=2.3e-05 Score=85.61 Aligned_cols=122 Identities=20% Similarity=0.148 Sum_probs=96.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCC
Q 011309 87 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 166 (489)
Q Consensus 87 ~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 166 (489)
.+.--.-.|+.+|+.-.|+..++.... ....+|..|.-|+++|++|+.+.+
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~-----------------------------~~lninc~d~lGr~al~iai~nen 74 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAV-----------------------------SKLNINCRDPLGRLALHIAIDNEN 74 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccc-----------------------------cccchhccChHhhhceeccccccc
Confidence 344556789999999999998864221 123389999999999999999999
Q ss_pred HHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC----------CccCCCCCcHHHH
Q 011309 167 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASR----------MSLNCNGWLPLDV 236 (489)
Q Consensus 167 ~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadv----------n~~d~~G~TpL~~ 236 (489)
.|++++|++++..+ . .+|.+|+..|..++|++|+.+-... ...-..+-|||.+
T Consensus 75 le~~eLLl~~~~~~--g---------------dALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliL 137 (822)
T KOG3609|consen 75 LELQELLLDTSSEE--G---------------DALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLML 137 (822)
T ss_pred HHHHHHHhcCcccc--c---------------hHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHH
Confidence 99999999987665 2 3899999999999999999874332 1223457899999
Q ss_pred HHHcCcHhHHHHhcCCCC
Q 011309 237 ARMWGRHWLEPLLAPSSD 254 (489)
Q Consensus 237 A~~~g~~~i~~LL~~~~~ 254 (489)
|+..++.+|+++|+..+.
T Consensus 138 AAh~NnyEil~~Ll~kg~ 155 (822)
T KOG3609|consen 138 AAHLNNFEILQCLLTRGH 155 (822)
T ss_pred HHHhcchHHHHHHHHcCC
Confidence 999999999888766544
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.89 E-value=2.6e-05 Score=71.19 Aligned_cols=66 Identities=24% Similarity=0.165 Sum_probs=61.4
Q ss_pred CCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCcHHHHHHHcCcHhHHHHhcCC
Q 011309 177 HANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRG-ASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 252 (489)
Q Consensus 177 Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~G-advn~~d~~G~TpL~~A~~~g~~~i~~LL~~~ 252 (489)
+.++|+.|.. |+|||+.|+..|+.+.|.+|+.+| +++...|..|.+++.+|-+.|+.+++..|.++
T Consensus 2 e~~in~rD~f----------gWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAF----------GWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCCccchhhh----------cchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 4578888876 999999999999999999999999 89999999999999999999999999988776
No 111
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.86 E-value=2.6e-05 Score=86.98 Aligned_cols=128 Identities=22% Similarity=0.188 Sum_probs=82.2
Q ss_pred CchHHHHHHHhCcHHHHHHHHHc-CCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccc
Q 011309 45 LNSPLHFAAAKGHNEIVALLLEN-GADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQ 123 (489)
Q Consensus 45 g~TpLh~Aa~~G~~eivk~LLe~-Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~ 123 (489)
|+|-||+++..++.-.++.+++- |...+..|. .|.-.+|+ +..++.+++.+|+..
T Consensus 574 ~~lllhL~a~~lyawLie~~~e~~~~~~~eld~----------d~qgV~hf-ca~lg~ewA~ll~~~------------- 629 (975)
T KOG0520|consen 574 DMLLLHLLAELLYAWLIEKVIEWAGSGDLELDR----------DGQGVIHF-CAALGYEWAFLPISA------------- 629 (975)
T ss_pred chHHHHHHHHHhHHHHHHHHhcccccCchhhcc----------cCCChhhH-hhhcCCceeEEEEee-------------
Confidence 36777777777777777777764 555555554 55556666 333444443333310
Q ss_pred cccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHH
Q 011309 124 IEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHF 203 (489)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~ 203 (489)
-+..++.+|..|+||||+|+..|+..++..|++.|++....... ++ -...|.|+--+
T Consensus 630 -------------------~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdp--s~--~~p~g~ta~~l 686 (975)
T KOG0520|consen 630 -------------------DGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDP--SP--ETPGGKTAADL 686 (975)
T ss_pred -------------------cccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCC--CC--CCCCCCchhhh
Confidence 01227888888999999999999988888888888776643321 11 11247788888
Q ss_pred HHHcCCHHHHHHHHHc
Q 011309 204 AACGGNLKCCQVLLSR 219 (489)
Q Consensus 204 Aa~~g~~eivk~LL~~ 219 (489)
|..+|+..+..+|-+.
T Consensus 687 a~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 687 ARANGHKGIAGYLSEK 702 (975)
T ss_pred hhcccccchHHHHhhh
Confidence 8888887777777654
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.79 E-value=4.9e-05 Score=69.41 Aligned_cols=67 Identities=25% Similarity=0.229 Sum_probs=61.9
Q ss_pred hhccccCCCccHHHHHHHcCCHHHHHHHHhcC-CCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 011309 146 FVNKAADGGITALHMAALNGYFDCVQLLLDLH-ANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGAS 222 (489)
Q Consensus 146 ~in~~d~~G~TpLh~Aa~~g~~e~v~~LL~~G-advn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gad 222 (489)
.+|.+|..|+|+||.|+..|.-+++.||+.+| +.|-..+.. |.+++.+|-+.|..++|+.|.+.-.+
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~s----------sldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDES----------SLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccc----------cchHHHHHHhcChHHHHHHHHHHhcc
Confidence 38999999999999999999999999999999 899988876 99999999999999999999987444
No 113
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.68 E-value=0.0001 Score=73.72 Aligned_cols=66 Identities=30% Similarity=0.320 Sum_probs=57.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Q 011309 156 TALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGW 231 (489)
Q Consensus 156 TpLh~Aa~~g~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~ 231 (489)
--|..|++.|+.+.|++|++.|.+||.+|+. ..+||.+|...|+.++||+||++||--..-.-+|.
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD~f----------D~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~ 103 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVDRF----------DSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGD 103 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhhcc----------cccHHHHHHHcCcHHHHHHHHHcCCcccccccCcc
Confidence 3588999999999999999999999999987 78999999999999999999999986433333343
No 114
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.66 E-value=3.9e-05 Score=85.85 Aligned_cols=85 Identities=31% Similarity=0.427 Sum_probs=78.5
Q ss_pred HHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChH
Q 011309 12 ERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTA 91 (489)
Q Consensus 12 t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~Tp 91 (489)
++||.|+..|..-+++.|++.|++++..+..+ +||||.+...|+...+..|+++|++++..+. .|.++
T Consensus 658 s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g--~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~----------~~~~~ 725 (785)
T KOG0521|consen 658 SLLHVAVGTGDSGAVELLLQNGADVNALDSKG--RTPLHHATASGHTSIACLLLKRGADPNAFDP----------DGKLP 725 (785)
T ss_pred chhhhhhccchHHHHHHHHhcCCcchhhhccC--CCcchhhhhhcccchhhhhccccccccccCc----------cCcch
Confidence 46999999999999999999999998888776 8999999999999999999999999999998 99999
Q ss_pred HHHHHHcCCHHHHHHHH
Q 011309 92 LHFAAVNGHVRCIRLVV 108 (489)
Q Consensus 92 Lh~Aa~~g~~~~vk~LL 108 (489)
|++|....+.+++-+|.
T Consensus 726 l~~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 726 LDIAMEAANADIVLLLR 742 (785)
T ss_pred hhHHhhhccccHHHHHh
Confidence 99998888888776665
No 115
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.62 E-value=5.7e-05 Score=84.28 Aligned_cols=123 Identities=22% Similarity=0.154 Sum_probs=91.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCC
Q 011309 87 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 166 (489)
Q Consensus 87 ~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 166 (489)
.|+|-||+++..+....++.+++- ....-...|.+|.-.+|++| .++
T Consensus 573 r~~lllhL~a~~lyawLie~~~e~--------------------------------~~~~~~eld~d~qgV~hfca-~lg 619 (975)
T KOG0520|consen 573 RDMLLLHLLAELLYAWLIEKVIEW--------------------------------AGSGDLELDRDGQGVIHFCA-ALG 619 (975)
T ss_pred cchHHHHHHHHHhHHHHHHHHhcc--------------------------------cccCchhhcccCCChhhHhh-hcC
Confidence 788999999999998888888742 00112334556666777744 455
Q ss_pred HHHHHHHH-hcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCcHHHHHHH
Q 011309 167 FDCVQLLL-DLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMS------LNCNGWLPLDVARM 239 (489)
Q Consensus 167 ~e~v~~LL-~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~------~d~~G~TpL~~A~~ 239 (489)
++.+-+|+ -.|..++.+|.. |+||||+|+.+|+..++..|++.|++... .+-.|.|+-.+|..
T Consensus 620 ~ewA~ll~~~~~~ai~i~D~~----------G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s 689 (975)
T KOG0520|consen 620 YEWAFLPISADGVAIDIRDRN----------GWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARA 689 (975)
T ss_pred CceeEEEEeecccccccccCC----------CCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhc
Confidence 56555554 467888888877 99999999999999999999988877543 34568899999999
Q ss_pred cCcHhHHHHhcCC
Q 011309 240 WGRHWLEPLLAPS 252 (489)
Q Consensus 240 ~g~~~i~~LL~~~ 252 (489)
.|+..+..+|.+.
T Consensus 690 ~g~~gia~~lse~ 702 (975)
T KOG0520|consen 690 NGHKGIAGYLSEK 702 (975)
T ss_pred ccccchHHHHhhh
Confidence 9998888777665
No 116
>KOG4265 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.50 E-value=3.4e-05 Score=76.95 Aligned_cols=54 Identities=28% Similarity=0.650 Sum_probs=42.6
Q ss_pred CCcchhhhhhhhcccccccCCcchh-hhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecC
Q 011309 291 DDADTCAVCLERACTVAAEGCRHEL-CVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLP 356 (489)
Q Consensus 291 ~~~~~C~iCle~~~~v~~~~C~H~~-C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~ 356 (489)
.....|+||+.+..++.+.||+|.- |-.||..|=... ..||+||++|..+..+=
T Consensus 288 ~~gkeCVIClse~rdt~vLPCRHLCLCs~Ca~~Lr~q~------------n~CPICRqpi~~ll~i~ 342 (349)
T KOG4265|consen 288 ESGKECVICLSESRDTVVLPCRHLCLCSGCAKSLRYQT------------NNCPICRQPIEELLEIY 342 (349)
T ss_pred cCCCeeEEEecCCcceEEecchhhehhHhHHHHHHHhh------------cCCCccccchHhhheec
Confidence 3467899999999999999999954 777777664222 24999999999987653
No 117
>KOG0317 consensus Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein [Posttranslational modification, protein turnover, chaperones]
Probab=97.47 E-value=6.8e-05 Score=72.65 Aligned_cols=49 Identities=35% Similarity=0.845 Sum_probs=41.7
Q ss_pred CCCCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccc
Q 011309 289 SSDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 349 (489)
Q Consensus 289 ~~~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I 349 (489)
.....-.|.+|||..-+..+.||||-||-.|++..|.... -||+||...
T Consensus 235 i~~a~~kC~LCLe~~~~pSaTpCGHiFCWsCI~~w~~ek~------------eCPlCR~~~ 283 (293)
T KOG0317|consen 235 IPEATRKCSLCLENRSNPSATPCGHIFCWSCILEWCSEKA------------ECPLCREKF 283 (293)
T ss_pred CCCCCCceEEEecCCCCCCcCcCcchHHHHHHHHHHcccc------------CCCcccccC
Confidence 4556688999999999999999999999999999994432 199999764
No 118
>PLN03208 E3 ubiquitin-protein ligase RMA2; Provisional
Probab=97.16 E-value=0.0004 Score=64.28 Aligned_cols=63 Identities=19% Similarity=0.419 Sum_probs=44.5
Q ss_pred CCCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCC----CCCCCCCCCCCcccccccc
Q 011309 290 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEM----VGPPGSIPCPLCRHGIVSF 352 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~----~~~~~~~~CP~CR~~I~~~ 352 (489)
+.+.-.|.||++..-+....+|||.+|..|+..+-...+.+.+. ....+...||+||..|..-
T Consensus 15 ~~~~~~CpICld~~~dPVvT~CGH~FC~~CI~~wl~~s~~s~~~~~~~~~~k~~~~CPvCR~~Is~~ 81 (193)
T PLN03208 15 SGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSEA 81 (193)
T ss_pred CCCccCCccCCCcCCCcEEcCCCchhHHHHHHHHHHhccccccccccccccCCCCcCCCCCCcCChh
Confidence 34567899999999999999999999999998764332211110 1122345799999999753
No 119
>PHA02929 N1R/p28-like protein; Provisional
Probab=97.09 E-value=0.00033 Score=67.52 Aligned_cols=52 Identities=27% Similarity=0.692 Sum_probs=39.5
Q ss_pred Ccchhhhhhhhccc--------ccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceec
Q 011309 292 DADTCAVCLERACT--------VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKL 355 (489)
Q Consensus 292 ~~~~C~iCle~~~~--------v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 355 (489)
..+.|.+|+|..-. ....+|+|.||..|....-.. ...||+||..+.+.++-
T Consensus 173 ~~~eC~ICle~~~~~~~~~~~~~vl~~C~H~FC~~CI~~Wl~~------------~~tCPlCR~~~~~v~~~ 232 (238)
T PHA02929 173 KDKECAICMEKVYDKEIKNMYFGILSNCNHVFCIECIDIWKKE------------KNTCPVCRTPFISVIKS 232 (238)
T ss_pred CCCCCccCCcccccCccccccceecCCCCCcccHHHHHHHHhc------------CCCCCCCCCEeeEEeee
Confidence 45789999997543 245689999999999887422 12499999999877653
No 120
>KOG4172 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.05 E-value=8.4e-05 Score=53.48 Aligned_cols=50 Identities=32% Similarity=0.646 Sum_probs=37.7
Q ss_pred chhhhhhhhcccccccCCcchh-hhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccccee
Q 011309 294 DTCAVCLERACTVAAEGCRHEL-CVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTK 354 (489)
Q Consensus 294 ~~C~iCle~~~~v~~~~C~H~~-C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 354 (489)
+.|.+|.|.+-+...-.|||.- |..|.+.+= ....-.||+||.+|...+|
T Consensus 8 dECTICye~pvdsVlYtCGHMCmCy~Cg~rl~-----------~~~~g~CPiCRapi~dvIk 58 (62)
T KOG4172|consen 8 DECTICYEHPVDSVLYTCGHMCMCYACGLRLK-----------KALHGCCPICRAPIKDVIK 58 (62)
T ss_pred cceeeeccCcchHHHHHcchHHhHHHHHHHHH-----------HccCCcCcchhhHHHHHHH
Confidence 8899999999999999999942 555555552 1123469999999987654
No 121
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.03 E-value=0.00065 Score=70.34 Aligned_cols=69 Identities=22% Similarity=0.194 Sum_probs=55.5
Q ss_pred CHHHHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Q 011309 166 YFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVAR 238 (489)
Q Consensus 166 ~~e~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~ 238 (489)
-...|++|.+++++.|..-.. -.....-.|+||+|+..|.-++|.+||+.|+|+.++|..|+||+.++.
T Consensus 403 ~p~~ie~lken~lsgnf~~~p----e~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTP----EANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred chhHHHHHHhcCCcccccccc----cccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 356889999998877643211 000112679999999999999999999999999999999999999997
No 122
>KOG1785 consensus Tyrosine kinase negative regulator CBL [Defense mechanisms]
Probab=97.00 E-value=0.00039 Score=69.78 Aligned_cols=54 Identities=28% Similarity=0.610 Sum_probs=43.4
Q ss_pred CCCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccce
Q 011309 290 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFT 353 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 353 (489)
.+..++|.||-|.-=+|..+||||-+|+.|.-.+= +.. +.-.|||||-.|.++-
T Consensus 366 gsTFeLCKICaendKdvkIEPCGHLlCt~CLa~WQ-~sd---------~gq~CPFCRcEIKGte 419 (563)
T KOG1785|consen 366 GSTFELCKICAENDKDVKIEPCGHLLCTSCLAAWQ-DSD---------EGQTCPFCRCEIKGTE 419 (563)
T ss_pred cchHHHHHHhhccCCCcccccccchHHHHHHHhhc-ccC---------CCCCCCceeeEecccc
Confidence 45679999999999999999999999998887662 111 1224999999999983
No 123
>PHA02926 zinc finger-like protein; Provisional
Probab=96.79 E-value=0.00083 Score=62.97 Aligned_cols=56 Identities=23% Similarity=0.567 Sum_probs=40.5
Q ss_pred CCCcchhhhhhhhcc---------cccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccc
Q 011309 290 SDDADTCAVCLERAC---------TVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 351 (489)
Q Consensus 290 ~~~~~~C~iCle~~~---------~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~ 351 (489)
.+..+.|.+|+|..- .....+|+|-||..|+..+-.... .......||+||.....
T Consensus 167 ~SkE~eCgICmE~I~eK~~~~eRrFGIL~~CnHsFCl~CIr~Wr~~r~------~~~~~rsCPiCR~~f~~ 231 (242)
T PHA02926 167 VSKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR------ETGASDNCPICRTRFRN 231 (242)
T ss_pred ccCCCCCccCccccccccccccccccccCCCCchHHHHHHHHHHHhcc------ccCcCCcCCCCcceeee
Confidence 345589999998741 246779999999999999975431 12234569999987663
No 124
>PF13639 zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C 1IYM_A 2EP4_A 2ECT_A 2JRJ_A 2ECN_A 2ECM_A 3NG2_A 2EA6_A ....
Probab=96.76 E-value=0.00052 Score=48.24 Aligned_cols=41 Identities=37% Similarity=0.767 Sum_probs=31.0
Q ss_pred chhhhhhhhc---ccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcc
Q 011309 294 DTCAVCLERA---CTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCR 346 (489)
Q Consensus 294 ~~C~iCle~~---~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR 346 (489)
+.|.||++.. -.+...+|+|.||..|+..+-.... .||+||
T Consensus 1 d~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~~~~~~~------------~CP~CR 44 (44)
T PF13639_consen 1 DECPICLEEFEDGEKVVKLPCGHVFHRSCIKEWLKRNN------------SCPVCR 44 (44)
T ss_dssp -CETTTTCBHHTTSCEEEETTSEEEEHHHHHHHHHHSS------------B-TTTH
T ss_pred CCCcCCChhhcCCCeEEEccCCCeeCHHHHHHHHHhCC------------cCCccC
Confidence 4688888876 3567788999999999999864432 599998
No 125
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.75 E-value=0.0022 Score=38.74 Aligned_cols=28 Identities=54% Similarity=0.871 Sum_probs=24.2
Q ss_pred CchHHHHHHHhCcHHHHHHHHHcCCCCC
Q 011309 45 LNSPLHFAAAKGHNEIVALLLENGADVN 72 (489)
Q Consensus 45 g~TpLh~Aa~~G~~eivk~LLe~Gad~n 72 (489)
|.||||+|+..|+.+++++|++.|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4789999999999999999999888764
No 126
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.74 E-value=0.0028 Score=38.30 Aligned_cols=28 Identities=50% Similarity=0.782 Sum_probs=25.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 011309 197 GSTPLHFAACGGNLKCCQVLLSRGASRM 224 (489)
Q Consensus 197 G~TpLh~Aa~~g~~eivk~LL~~Gadvn 224 (489)
|.||||+|+..++.+++++|+++|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 7899999999999999999999988764
No 127
>KOG0823 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.55 E-value=0.00092 Score=63.07 Aligned_cols=58 Identities=28% Similarity=0.556 Sum_probs=47.0
Q ss_pred CCCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecC
Q 011309 290 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLP 356 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~ 356 (489)
..+.-.|-||||.+-+..+..|||-+|--|...+=-. .+.+..||+||..|..=.++|
T Consensus 44 ~~~~FdCNICLd~akdPVvTlCGHLFCWpClyqWl~~---------~~~~~~cPVCK~~Vs~~~vvP 101 (230)
T KOG0823|consen 44 DGGFFDCNICLDLAKDPVVTLCGHLFCWPCLYQWLQT---------RPNSKECPVCKAEVSIDTVVP 101 (230)
T ss_pred CCCceeeeeeccccCCCEEeecccceehHHHHHHHhh---------cCCCeeCCccccccccceEEe
Confidence 4556679999999999999999999999999888422 334556999999988765555
No 128
>PF14634 zf-RING_5: zinc-RING finger domain
Probab=96.51 E-value=0.0019 Score=45.42 Aligned_cols=40 Identities=33% Similarity=0.852 Sum_probs=30.3
Q ss_pred hhhhhhhc---ccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccc
Q 011309 296 CAVCLERA---CTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRH 347 (489)
Q Consensus 296 C~iCle~~---~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~ 347 (489)
|.+|+++. -...+..|||.+|..|+..+= ...+.||+||+
T Consensus 2 C~~C~~~~~~~~~~~l~~CgH~~C~~C~~~~~------------~~~~~CP~C~k 44 (44)
T PF14634_consen 2 CNICFEKYSEERRPRLTSCGHIFCEKCLKKLK------------GKSVKCPICRK 44 (44)
T ss_pred CcCcCccccCCCCeEEcccCCHHHHHHHHhhc------------CCCCCCcCCCC
Confidence 56677666 246889999999999997772 23457999984
No 129
>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H)
Probab=96.38 E-value=0.0027 Score=43.89 Aligned_cols=43 Identities=37% Similarity=0.794 Sum_probs=31.7
Q ss_pred hhhhhhhc-ccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccc
Q 011309 296 CAVCLERA-CTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 349 (489)
Q Consensus 296 C~iCle~~-~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I 349 (489)
|.+|++.. ..+...+|+|.+|..|....-.. +...||+||..+
T Consensus 2 C~iC~~~~~~~~~~~~C~H~~c~~C~~~~~~~-----------~~~~Cp~C~~~~ 45 (45)
T cd00162 2 CPICLEEFREPVVLLPCGHVFCRSCIDKWLKS-----------GKNTCPLCRTPI 45 (45)
T ss_pred CCcCchhhhCceEecCCCChhcHHHHHHHHHh-----------CcCCCCCCCCcC
Confidence 67888876 44556679999999999877432 234599999764
No 130
>PF00097 zf-C3HC4: Zinc finger, C3HC4 type (RING finger); InterPro: IPR018957 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid []. Many proteins containing a RING finger play a key role in the ubiquitination pathway []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1CHC_A 2ECW_A 2Y43_B 1V87_A 2DJB_A 2H0D_B 3RPG_C 3KNV_A 2CKL_B 1JM7_A ....
Probab=96.35 E-value=0.0021 Score=44.20 Aligned_cols=40 Identities=35% Similarity=0.826 Sum_probs=31.7
Q ss_pred hhhhhhhccccc-ccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCc
Q 011309 296 CAVCLERACTVA-AEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLC 345 (489)
Q Consensus 296 C~iCle~~~~v~-~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~C 345 (489)
|.+|++..-... ..+|||.||..|....=.. .+...||+|
T Consensus 1 C~iC~~~~~~~~~~~~C~H~fC~~C~~~~~~~----------~~~~~CP~C 41 (41)
T PF00097_consen 1 CPICLEPFEDPVILLPCGHSFCRDCLRKWLEN----------SGSVKCPLC 41 (41)
T ss_dssp ETTTSSBCSSEEEETTTSEEEEHHHHHHHHHH----------TSSSBTTTT
T ss_pred CCcCCccccCCCEEecCCCcchHHHHHHHHHh----------cCCccCCcC
Confidence 678888887777 9999999999999988644 123459998
No 131
>COG5574 PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.20 E-value=0.0022 Score=61.59 Aligned_cols=47 Identities=30% Similarity=0.687 Sum_probs=38.7
Q ss_pred CcchhhhhhhhcccccccCCcchhhhhHHHH-hhhcCCCCCCCCCCCCCCCCCCccccc
Q 011309 292 DADTCAVCLERACTVAAEGCRHELCVRCALY-LCSTNNIPSEMVGPPGSIPCPLCRHGI 349 (489)
Q Consensus 292 ~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~-lC~~~~~~~~~~~~~~~~~CP~CR~~I 349 (489)
..-.|.+|+|..-.....+|||-||-.|.+. ++... .-.||+||+.+
T Consensus 214 ~d~kC~lC~e~~~~ps~t~CgHlFC~~Cl~~~~t~~k-----------~~~CplCRak~ 261 (271)
T COG5574 214 ADYKCFLCLEEPEVPSCTPCGHLFCLSCLLISWTKKK-----------YEFCPLCRAKV 261 (271)
T ss_pred cccceeeeecccCCcccccccchhhHHHHHHHHHhhc-----------cccCchhhhhc
Confidence 3466999999999999999999999999998 65332 22599999865
No 132
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.97 E-value=0.05 Score=51.48 Aligned_cols=123 Identities=14% Similarity=0.165 Sum_probs=79.9
Q ss_pred hHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCcccccccccc
Q 011309 47 SPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEG 126 (489)
Q Consensus 47 TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~ 126 (489)
--|--|+..-+.+.+.-++... . .-.++|.+|+.++..+++-+|++...-. ...+
T Consensus 155 isledAV~AsN~~~i~~~VtdK-----k------------dA~~Am~~si~~~K~dva~~lls~f~ft------~~dv-- 209 (284)
T PF06128_consen 155 ISLEDAVKASNYEEISNLVTDK-----K------------DAHQAMWLSIGNAKEDVALYLLSKFNFT------KQDV-- 209 (284)
T ss_pred ccHHHHHhhcCHHHHHHHhcch-----H------------HHHHHHHHHhcccHHHHHHHHHhhccee------cchh--
Confidence 4567788887887777766521 1 3457888888888889999888653210 0000
Q ss_pred ccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHH--cCCHHHHHHHHhcC-CCcccccccCCCccccCCCCCcHHHH
Q 011309 127 DRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAAL--NGYFDCVQLLLDLH-ANVSAVTFHYGTSMDLIGAGSTPLHF 203 (489)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~--~g~~e~v~~LL~~G-advn~~~~~~~~~~~~~~~G~TpLh~ 203 (489)
+.... +.--+-++.. ..+..++++.|++| ++||..-.. ..+|.|-|--
T Consensus 210 --------------------~~~~~--~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~-------~NSGdtMLDN 260 (284)
T PF06128_consen 210 --------------------ASMEK--ELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQK-------VNSGDTMLDN 260 (284)
T ss_pred --------------------hhcCc--chhhHHHHHhhcCCcHHHHHHHHhccccccchhhhc-------cCCcchHHHh
Confidence 00000 1111222222 34677889999998 777765433 1359999999
Q ss_pred HHHcCCHHHHHHHHHcCCCC
Q 011309 204 AACGGNLKCCQVLLSRGASR 223 (489)
Q Consensus 204 Aa~~g~~eivk~LL~~Gadv 223 (489)
|...++.+++.+||++||-.
T Consensus 261 A~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 261 AMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred HHhcCcHHHHHHHHHcCccc
Confidence 99999999999999999843
No 133
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.96 E-value=0.013 Score=61.01 Aligned_cols=73 Identities=22% Similarity=0.203 Sum_probs=56.8
Q ss_pred HHHHHHHhhcCCCCcccC----CCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHc
Q 011309 23 FVEAKMLLDCNPCLAKYS----TFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVN 98 (489)
Q Consensus 23 ~~~Vk~LL~~g~~l~~~~----~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~ 98 (489)
.+.|.+|.+.+.+.|... .+.-.-|+||+|+..|.-++|.+||+.|+|+..+|. .|+||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~----------~Grtpy~ls~-- 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDG----------AGRTPYSLSA-- 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhccc----------CCCCcccccc--
Confidence 566788888776664322 222236999999999999999999999999999998 9999999877
Q ss_pred CCHHHHHHHH
Q 011309 99 GHVRCIRLVV 108 (489)
Q Consensus 99 g~~~~vk~LL 108 (489)
+.++-..++
T Consensus 472 -nkdVk~~F~ 480 (591)
T KOG2505|consen 472 -NKDVKSIFI 480 (591)
T ss_pred -cHHHHHHHH
Confidence 455544444
No 134
>PF13923 zf-C3HC4_2: Zinc finger, C3HC4 type (RING finger); PDB: 3HCU_A 2ECI_A 2JMD_A 3HCS_B 3HCT_A 3ZTG_A 2YUR_A 3L11_A.
Probab=95.94 E-value=0.004 Score=42.50 Aligned_cols=29 Identities=24% Similarity=0.690 Sum_probs=24.4
Q ss_pred hhhhhhhcccc-cccCCcchhhhhHHHHhh
Q 011309 296 CAVCLERACTV-AAEGCRHELCVRCALYLC 324 (489)
Q Consensus 296 C~iCle~~~~v-~~~~C~H~~C~~C~~~lC 324 (489)
|.+|++..-+. ...+|||.+|..|+...-
T Consensus 1 C~iC~~~~~~~~~~~~CGH~fC~~C~~~~~ 30 (39)
T PF13923_consen 1 CPICLDELRDPVVVTPCGHSFCKECIEKYL 30 (39)
T ss_dssp ETTTTSB-SSEEEECTTSEEEEHHHHHHHH
T ss_pred CCCCCCcccCcCEECCCCCchhHHHHHHHH
Confidence 67888888777 789999999999998874
No 135
>PF15227 zf-C3HC4_4: zinc finger of C3HC4-type, RING; PDB: 2EGP_A 2ECV_A 2ECJ_A 2YSL_A 2YSJ_A.
Probab=95.90 E-value=0.005 Score=42.87 Aligned_cols=42 Identities=26% Similarity=0.659 Sum_probs=28.6
Q ss_pred hhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCc
Q 011309 296 CAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLC 345 (489)
Q Consensus 296 C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~C 345 (489)
|.+|++-.-+....+|||.||..|+-.+-..... ....||.|
T Consensus 1 CpiC~~~~~~Pv~l~CGH~FC~~Cl~~~~~~~~~--------~~~~CP~C 42 (42)
T PF15227_consen 1 CPICLDLFKDPVSLPCGHSFCRSCLERLWKEPSG--------SGFSCPEC 42 (42)
T ss_dssp ETTTTSB-SSEEE-SSSSEEEHHHHHHHHCCSSS--------ST---SSS
T ss_pred CCccchhhCCccccCCcCHHHHHHHHHHHHccCC--------cCCCCcCC
Confidence 6789999889999999999999999888533211 11569988
No 136
>KOG1571 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.88 E-value=0.0017 Score=65.05 Aligned_cols=51 Identities=33% Similarity=0.675 Sum_probs=40.3
Q ss_pred CCCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceec
Q 011309 290 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKL 355 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 355 (489)
..-.+.|++|+++.=+...-+|||. |.|..|+...+ .||+||+.|...+|.
T Consensus 302 ~~~p~lcVVcl~e~~~~~fvpcGh~----ccct~cs~~l~-----------~CPvCR~rI~~~~k~ 352 (355)
T KOG1571|consen 302 LPQPDLCVVCLDEPKSAVFVPCGHV----CCCTLCSKHLP-----------QCPVCRQRIRLVRKR 352 (355)
T ss_pred cCCCCceEEecCCccceeeecCCcE----EEchHHHhhCC-----------CCchhHHHHHHHHHH
Confidence 3456889999999999999999994 33667766643 399999999887653
No 137
>KOG4275 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.88 E-value=0.0026 Score=61.65 Aligned_cols=48 Identities=25% Similarity=0.624 Sum_probs=37.6
Q ss_pred cchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceec
Q 011309 293 ADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKL 355 (489)
Q Consensus 293 ~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 355 (489)
..+|.||+|.+.+-.+..|||.+ +|+.|-+.. .-||+||+-|.+.+++
T Consensus 300 ~~LC~ICmDaP~DCvfLeCGHmV----tCt~CGkrm-----------~eCPICRqyi~rvvri 347 (350)
T KOG4275|consen 300 RRLCAICMDAPRDCVFLECGHMV----TCTKCGKRM-----------NECPICRQYIVRVVRI 347 (350)
T ss_pred HHHHHHHhcCCcceEEeecCcEE----eehhhcccc-----------ccCchHHHHHHHHHhh
Confidence 78999999999999999999966 444443221 1499999999988764
No 138
>KOG2164 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.74 E-value=0.0047 Score=64.57 Aligned_cols=52 Identities=29% Similarity=0.676 Sum_probs=42.1
Q ss_pred cchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccc
Q 011309 293 ADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 351 (489)
Q Consensus 293 ~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~ 351 (489)
...|.|||+..-......|||-+|.-|++..=... .--+...||+||..|.-
T Consensus 186 ~~~CPICL~~~~~p~~t~CGHiFC~~CiLqy~~~s-------~~~~~~~CPiC~s~I~~ 237 (513)
T KOG2164|consen 186 DMQCPICLEPPSVPVRTNCGHIFCGPCILQYWNYS-------AIKGPCSCPICRSTITL 237 (513)
T ss_pred CCcCCcccCCCCcccccccCceeeHHHHHHHHhhh-------cccCCccCCchhhhccc
Confidence 67899999999888888899999999999875443 12234579999999976
No 139
>KOG0320 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.38 E-value=0.013 Score=53.24 Aligned_cols=50 Identities=24% Similarity=0.659 Sum_probs=37.2
Q ss_pred CCCcchhhhhhhhcccc--cccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccc
Q 011309 290 SDDADTCAVCLERACTV--AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 351 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v--~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~ 351 (489)
..+.--|.+||+..-.. ....|||-||-.|+-..=... .+||+||-.|..
T Consensus 128 ~~~~~~CPiCl~~~sek~~vsTkCGHvFC~~Cik~alk~~------------~~CP~C~kkIt~ 179 (187)
T KOG0320|consen 128 KEGTYKCPICLDSVSEKVPVSTKCGHVFCSQCIKDALKNT------------NKCPTCRKKITH 179 (187)
T ss_pred cccccCCCceecchhhccccccccchhHHHHHHHHHHHhC------------CCCCCcccccch
Confidence 44557799999988654 458999999999997764222 249999976653
No 140
>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=95.05 E-value=0.014 Score=57.90 Aligned_cols=55 Identities=25% Similarity=0.563 Sum_probs=44.8
Q ss_pred CCCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccccee
Q 011309 290 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTK 354 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 354 (489)
..+...|.||-+..-.+...||+|++|-.|++.+=.-.++. -||+||..-.-.+-
T Consensus 58 DEen~~C~ICA~~~TYs~~~PC~H~~CH~Ca~RlRALY~~K----------~C~~CrTE~e~V~f 112 (493)
T COG5236 58 DEENMNCQICAGSTTYSARYPCGHQICHACAVRLRALYMQK----------GCPLCRTETEAVVF 112 (493)
T ss_pred ccccceeEEecCCceEEEeccCCchHHHHHHHHHHHHHhcc----------CCCccccccceEEE
Confidence 35567899999999999999999999999999986554432 39999988766654
No 141
>TIGR00599 rad18 DNA repair protein rad18. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=94.95 E-value=0.016 Score=60.09 Aligned_cols=49 Identities=27% Similarity=0.543 Sum_probs=38.9
Q ss_pred CCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccc
Q 011309 291 DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 351 (489)
Q Consensus 291 ~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~ 351 (489)
...-.|.+|++........+|+|.||..|+-..-.. ...||.||..+..
T Consensus 24 e~~l~C~IC~d~~~~PvitpCgH~FCs~CI~~~l~~------------~~~CP~Cr~~~~~ 72 (397)
T TIGR00599 24 DTSLRCHICKDFFDVPVLTSCSHTFCSLCIRRCLSN------------QPKCPLCRAEDQE 72 (397)
T ss_pred ccccCCCcCchhhhCccCCCCCCchhHHHHHHHHhC------------CCCCCCCCCcccc
Confidence 345689999999988889999999999999765311 1259999998764
No 142
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.91 E-value=0.3 Score=44.98 Aligned_cols=141 Identities=13% Similarity=0.039 Sum_probs=88.4
Q ss_pred chHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccc
Q 011309 46 NSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIE 125 (489)
Q Consensus 46 ~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~ 125 (489)
+-.|..|+..+.+.|++.+-+...+- .. ..++-.-.|++..+.++|+|+-+...-
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~--~~-----------~~q~LFElAC~~qkydiV~WI~qnL~i------------ 101 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE--RY-----------LNQELFELACEEQKYDIVKWIGQNLHI------------ 101 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc--hh-----------HHHHHHHHHHHHccccHHHHHhhccCC------------
Confidence 45678899999999998887653321 11 467889999999999999999643211
Q ss_pred cccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHHHH----HHHHhcCCCcccccccCCCccccCCCCCcHH
Q 011309 126 GDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCV----QLLLDLHANVSAVTFHYGTSMDLIGAGSTPL 201 (489)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~v----~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpL 201 (489)
.+-.+-+-.|....+.++. .+++++...-...|.. .+ -.--|
T Consensus 102 --------------------------~~~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~-----~l---l~~hl 147 (192)
T PF03158_consen 102 --------------------------YNPEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPT-----SL---LTQHL 147 (192)
T ss_pred --------------------------CCchhhhhhhhhccchhHHHHHHHHHHhhcccccccCHH-----HH---HHHHH
Confidence 1112234445555554431 2233332111000000 00 11357
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCcHhHHHHhcC
Q 011309 202 HFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAP 251 (489)
Q Consensus 202 h~Aa~~g~~eivk~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~i~~LL~~ 251 (489)
..|+..|-+.-|...|++|.+++. +.|..|+++++..|..++..
T Consensus 148 ~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 148 EKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 788888888888888888888764 68888888888888777653
No 143
>smart00184 RING Ring finger. E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s)
Probab=94.90 E-value=0.02 Score=37.87 Aligned_cols=29 Identities=28% Similarity=0.647 Sum_probs=24.2
Q ss_pred hhhhhhhcccccccCCcchhhhhHHHHhh
Q 011309 296 CAVCLERACTVAAEGCRHELCVRCALYLC 324 (489)
Q Consensus 296 C~iCle~~~~v~~~~C~H~~C~~C~~~lC 324 (489)
|.+|++........+|+|.+|..|....-
T Consensus 1 C~iC~~~~~~~~~~~C~H~~c~~C~~~~~ 29 (39)
T smart00184 1 CPICLEELKDPVVLPCGHTFCRSCIRKWL 29 (39)
T ss_pred CCcCccCCCCcEEecCCChHHHHHHHHHH
Confidence 56788887788889999999999987764
No 144
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.67 E-value=0.53 Score=43.39 Aligned_cols=139 Identities=14% Similarity=0.062 Sum_probs=94.0
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHH
Q 011309 13 RLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTAL 92 (489)
Q Consensus 13 ~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpL 92 (489)
-|..|++.+-+.+++.+-+...+- ....++.+-.|++..+.|+|+|+-+. +... +-.+-.
T Consensus 49 Ll~HAVk~nmL~ILqkyke~L~~~-----~~~~q~LFElAC~~qkydiV~WI~qn---L~i~------------~~~~iF 108 (192)
T PF03158_consen 49 LLYHAVKYNMLSILQKYKEDLENE-----RYLNQELFELACEEQKYDIVKWIGQN---LHIY------------NPEDIF 108 (192)
T ss_pred HHHHHHHcCcHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHccccHHHHHhhc---cCCC------------Cchhhh
Confidence 478899999999998887754321 11227899999999999999999443 3222 224567
Q ss_pred HHHHHcCCHHHHH----HHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCHH
Q 011309 93 HFAAVNGHVRCIR----LVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFD 168 (489)
Q Consensus 93 h~Aa~~g~~~~vk----~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e 168 (489)
-.|......+... +++...... . ......++ ..-|.+|+..|...
T Consensus 109 dIA~~~kDlsLyslGY~l~~~~~~~~---------------~---------~~d~~~ll-------~~hl~~a~~kgll~ 157 (192)
T PF03158_consen 109 DIAFAKKDLSLYSLGYKLLFNRMMSE---------------H---------NEDPTSLL-------TQHLEKAAAKGLLP 157 (192)
T ss_pred hhhhhccchhHHHHHHHHHHhhcccc---------------c---------ccCHHHHH-------HHHHHHHHHCCCHH
Confidence 7888888776521 122111100 0 00000001 12478999999999
Q ss_pred HHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 011309 169 CVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 218 (489)
Q Consensus 169 ~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL~ 218 (489)
.|...+++|.+++. ++|..|+..++-.++.+++.
T Consensus 158 F~letlkygg~~~~----------------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 158 FVLETLKYGGNVDI----------------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHcCCcccH----------------HHHHHHHHhhHHHHHHHhhc
Confidence 99999999988753 69999999999999998874
No 145
>PF12678 zf-rbx1: RING-H2 zinc finger; InterPro: IPR024766 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This domain constitutes a conserved region found in proteins that participate in diverse functions relevant to chromosome metabolism and cell cycle control [].The domain contains 8 cysteine/ histidine residues which are proposed to be the conserved residues involved in zinc binding.; PDB: 4A0C_D 4A0L_I 4A0K_B 2ECL_A 1LDK_C 3RTR_F 3DQV_Y 1U6G_B 1LDJ_B 2HYE_D ....
Probab=94.53 E-value=0.022 Score=44.77 Aligned_cols=43 Identities=37% Similarity=0.838 Sum_probs=31.3
Q ss_pred Ccchhhhhhhhc-------------ccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcc
Q 011309 292 DADTCAVCLERA-------------CTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCR 346 (489)
Q Consensus 292 ~~~~C~iCle~~-------------~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR 346 (489)
..+.|.||++.. |.+...+|+|.|-..|+...-...+ .||+||
T Consensus 18 ~~d~C~IC~~~l~~~~~~~~~~~~~~~i~~~~C~H~FH~~Ci~~Wl~~~~------------~CP~CR 73 (73)
T PF12678_consen 18 ADDNCAICREPLEDPCPECQAPQDECPIVWGPCGHIFHFHCISQWLKQNN------------TCPLCR 73 (73)
T ss_dssp CCSBETTTTSBTTSTTCCHHHCTTTS-EEEETTSEEEEHHHHHHHHTTSS------------B-TTSS
T ss_pred cCCcccccChhhhChhhhhcCCccccceEecccCCCEEHHHHHHHHhcCC------------cCCCCC
Confidence 345699998876 6677788999999999987753222 599998
No 146
>KOG1100 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=94.17 E-value=0.017 Score=54.80 Aligned_cols=45 Identities=38% Similarity=0.688 Sum_probs=34.5
Q ss_pred hhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceec
Q 011309 296 CAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKL 355 (489)
Q Consensus 296 C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 355 (489)
|..|.++..+|.+.||+| +.+|..+..+ ...||+|+..+.+++.+
T Consensus 161 Cr~C~~~~~~VlllPCrH-------l~lC~~C~~~--------~~~CPiC~~~~~s~~~v 205 (207)
T KOG1100|consen 161 CRKCGEREATVLLLPCRH-------LCLCGICDES--------LRICPICRSPKTSSVEV 205 (207)
T ss_pred ceecCcCCceEEeecccc-------eEeccccccc--------CccCCCCcChhhceeec
Confidence 999999999999999999 4455444321 12399999999888743
No 147
>TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1. All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=93.17 E-value=0.066 Score=53.40 Aligned_cols=48 Identities=27% Similarity=0.596 Sum_probs=32.8
Q ss_pred cchhhhhhhhc---cc--ccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccc
Q 011309 293 ADTCAVCLERA---CT--VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 351 (489)
Q Consensus 293 ~~~C~iCle~~---~~--v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~ 351 (489)
...|.+|.... .+ ..+.+|||.||-.|.-.+-.. ++.+||.|+..+..
T Consensus 3 ~~~CP~Ck~~~y~np~~kl~i~~CGH~~C~sCv~~l~~~-----------~~~~CP~C~~~lrk 55 (309)
T TIGR00570 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVR-----------GSGSCPECDTPLRK 55 (309)
T ss_pred CCCCCcCCCCCccCcccccccCCCCCcccHHHHHHHhcC-----------CCCCCCCCCCccch
Confidence 35788998742 22 133389999999999887311 22369999987765
No 148
>KOG2177 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=92.88 E-value=0.069 Score=52.76 Aligned_cols=46 Identities=30% Similarity=0.718 Sum_probs=38.4
Q ss_pred CCCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccc
Q 011309 290 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRH 347 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~ 347 (489)
..+.-.|.||++..-.....+|+|.+|..|+-..-. ....||.||.
T Consensus 10 ~~~~~~C~iC~~~~~~p~~l~C~H~~c~~C~~~~~~------------~~~~Cp~cr~ 55 (386)
T KOG2177|consen 10 LQEELTCPICLEYFREPVLLPCGHNFCRACLTRSWE------------GPLSCPVCRP 55 (386)
T ss_pred ccccccChhhHHHhhcCccccccchHhHHHHHHhcC------------CCcCCcccCC
Confidence 346678999999998889999999999999987753 2367999994
No 149
>PF13445 zf-RING_UBOX: RING-type zinc-finger; PDB: 2CT2_A.
Probab=92.81 E-value=0.056 Score=37.79 Aligned_cols=31 Identities=29% Similarity=0.638 Sum_probs=19.5
Q ss_pred hhhhhhhccc----ccccCCcchhhhhHHHHhhhcC
Q 011309 296 CAVCLERACT----VAAEGCRHELCVRCALYLCSTN 327 (489)
Q Consensus 296 C~iCle~~~~----v~~~~C~H~~C~~C~~~lC~~~ 327 (489)
|.||.| ..+ ....+|||.+|-.|.-.+-...
T Consensus 1 CpIc~e-~~~~~n~P~~L~CGH~~c~~cl~~l~~~~ 35 (43)
T PF13445_consen 1 CPICKE-FSTEENPPMVLPCGHVFCKDCLQKLSKKS 35 (43)
T ss_dssp -TTT-----TTSS-EEE-SSS-EEEHHHHHHHHHH-
T ss_pred CCcccc-ccCCCCCCEEEeCccHHHHHHHHHHHhcC
Confidence 678888 666 5667899999999999997654
No 150
>COG5432 RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Probab=92.70 E-value=0.077 Score=51.64 Aligned_cols=54 Identities=26% Similarity=0.531 Sum_probs=38.3
Q ss_pred CCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecCC
Q 011309 291 DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPG 357 (489)
Q Consensus 291 ~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 357 (489)
.....|.||-++.-.....+|||.||.-|+-..- . ...-||+||..- .++.|++
T Consensus 23 Ds~lrC~IC~~~i~ip~~TtCgHtFCslCIR~hL-----~-------~qp~CP~Cr~~~-~esrlr~ 76 (391)
T COG5432 23 DSMLRCRICDCRISIPCETTCGHTFCSLCIRRHL-----G-------TQPFCPVCREDP-CESRLRG 76 (391)
T ss_pred hhHHHhhhhhheeecceecccccchhHHHHHHHh-----c-------CCCCCccccccH-Hhhhccc
Confidence 4467899999999888999999999766664331 1 122499999753 3455555
No 151
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=90.95 E-value=0.95 Score=43.08 Aligned_cols=92 Identities=15% Similarity=0.074 Sum_probs=66.0
Q ss_pred HHHHHHHHcCCHHHHHHHhhcC----CCCcccCCCCCCchHHHHHHH--hCcHHHHHHHHHcC-CCCCCcCCCCCccccc
Q 011309 12 ERLVSAARDGDFVEAKMLLDCN----PCLAKYSTFGGLNSPLHFAAA--KGHNEIVALLLENG-ADVNSRNYCGQVTRAD 84 (489)
Q Consensus 12 t~L~~Aa~~G~~~~Vk~LL~~g----~~l~~~~~~~~g~TpLh~Aa~--~G~~eivk~LLe~G-ad~n~~d~~g~i~~~d 84 (489)
++|..|+..+..+++.+||.+- .++...... .--+-++.. .-+..|++++|++| +++|..-...
T Consensus 181 ~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~~---~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~------ 251 (284)
T PF06128_consen 181 QAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEKE---LYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKV------ 251 (284)
T ss_pred HHHHHHhcccHHHHHHHHHhhcceecchhhhcCcc---hhhHHHHHhhcCCcHHHHHHHHhccccccchhhhcc------
Confidence 5788899999999999999752 222211111 223445444 34578999999998 7887654322
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHccCC
Q 011309 85 YLSGRTALHFAAVNGHVRCIRLVVADFVP 113 (489)
Q Consensus 85 ~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~ 113 (489)
..|.|-|.-|+.+++.+++.+||..|+.
T Consensus 252 -NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 252 -NSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred -CCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 2899999999999999999999988763
No 152
>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function. The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.
Probab=90.54 E-value=0.27 Score=44.03 Aligned_cols=36 Identities=25% Similarity=0.492 Sum_probs=27.8
Q ss_pred CCCCCCcccccccceecCC--CCccccCCCcccccCCC
Q 011309 339 SIPCPLCRHGIVSFTKLPG--SPVKDIKQPLSLGLCTP 374 (489)
Q Consensus 339 ~~~CP~CR~~I~~~~~~~~--~~~~~~~~~~~~~~~~~ 374 (489)
...||+||..|.+|+++.+ .-+-+++|+-+.--|.|
T Consensus 80 ~L~CPLCRG~V~GWtvve~AR~~LN~K~RsC~~e~C~F 117 (162)
T PF07800_consen 80 ELACPLCRGEVKGWTVVEPARRFLNAKKRSCSQESCSF 117 (162)
T ss_pred cccCccccCceeceEEchHHHHHhccCCccCccccccc
Confidence 5789999999999988866 34457777877776643
No 153
>KOG0824 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=90.41 E-value=0.16 Score=49.93 Aligned_cols=58 Identities=21% Similarity=0.454 Sum_probs=39.1
Q ss_pred CCCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecCCC
Q 011309 290 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGS 358 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~ 358 (489)
......|.+|+-..--..-.+|+|+||.-|+ .. ++. . ....|++||.+|.+-+-+-++
T Consensus 4 ~~~~~eC~IC~nt~n~Pv~l~C~HkFCyiCi-----KG--sy~-n---dk~~CavCR~pids~i~~~ps 61 (324)
T KOG0824|consen 4 RTKKKECLICYNTGNCPVNLYCFHKFCYICI-----KG--SYK-N---DKKTCAVCRFPIDSTIDFEPS 61 (324)
T ss_pred cccCCcceeeeccCCcCccccccchhhhhhh-----cc--hhh-c---CCCCCceecCCCCcchhcchh
Confidence 3455789999877755688999999965554 22 111 1 122499999999987655444
No 154
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=90.01 E-value=0.13 Score=38.63 Aligned_cols=45 Identities=11% Similarity=0.025 Sum_probs=35.9
Q ss_pred hhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccc
Q 011309 295 TCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 351 (489)
Q Consensus 295 ~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~ 351 (489)
.|.+|++-.-+....+|||-+|-.|+...-.. ...||+|+..+..
T Consensus 3 ~Cpi~~~~~~~Pv~~~~G~v~~~~~i~~~~~~------------~~~cP~~~~~~~~ 47 (63)
T smart00504 3 LCPISLEVMKDPVILPSGQTYERRAIEKWLLS------------HGTDPVTGQPLTH 47 (63)
T ss_pred CCcCCCCcCCCCEECCCCCEEeHHHHHHHHHH------------CCCCCCCcCCCCh
Confidence 57888888888888899999999999988633 1259999988743
No 155
>KOG0287 consensus Postreplication repair protein RAD18 [Replication, recombination and repair]
Probab=89.60 E-value=0.24 Score=49.37 Aligned_cols=47 Identities=26% Similarity=0.582 Sum_probs=35.2
Q ss_pred CCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccc
Q 011309 291 DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 349 (489)
Q Consensus 291 ~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I 349 (489)
.+.-.|.||+|-.-.....+|+|.||.-|+-..- .+ .+.||.|+-.+
T Consensus 21 D~lLRC~IC~eyf~ip~itpCsHtfCSlCIR~~L-----~~-------~p~CP~C~~~~ 67 (442)
T KOG0287|consen 21 DDLLRCGICFEYFNIPMITPCSHTFCSLCIRKFL-----SY-------KPQCPTCCVTV 67 (442)
T ss_pred HHHHHHhHHHHHhcCceeccccchHHHHHHHHHh-----cc-------CCCCCceeccc
Confidence 3446799999999888999999999887775543 11 12499998654
No 156
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=88.36 E-value=1.4 Score=34.61 Aligned_cols=50 Identities=30% Similarity=0.342 Sum_probs=41.9
Q ss_pred CchHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHHHHHHHHHc
Q 011309 9 ASGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLEN 67 (489)
Q Consensus 9 ~s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~eivk~LLe~ 67 (489)
-+.+-|..|+..|+.++++.+++.+. .+ ...|..|+..-+.+++++|+++
T Consensus 5 It~~tl~~Ai~GGN~eII~~c~~~~~-~~--------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 5 ITKKTLEYAIIGGNFEIINICLKKNK-PD--------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred cCHHHHHHHHhCCCHHHHHHHHHHhc-cH--------HHHHHHHHHHhhHHHHHHHHHh
Confidence 34567999999999999999997551 11 3579999999999999999996
No 157
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=88.10 E-value=0.89 Score=35.76 Aligned_cols=49 Identities=16% Similarity=0.357 Sum_probs=41.3
Q ss_pred chHHHHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHcc
Q 011309 46 NSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADF 111 (489)
Q Consensus 46 ~TpLh~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~ 111 (489)
..-|..|+..|+.||++.+++.+ .++ ...|..|+...+.+++++|++..
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~----------------~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD----------------NDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH----------------HHHHHHHHHHhhHHHHHHHHHhc
Confidence 45789999999999999999865 222 35799999999999999999763
No 158
>KOG1039 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=87.59 E-value=0.39 Score=48.99 Aligned_cols=55 Identities=24% Similarity=0.602 Sum_probs=38.8
Q ss_pred CCcchhhhhhhhccccc-----c---cCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccc
Q 011309 291 DDADTCAVCLERACTVA-----A---EGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 350 (489)
Q Consensus 291 ~~~~~C~iCle~~~~v~-----~---~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~ 350 (489)
.....|.||+|..-... . .+|.|-+|..|+...=+.... ...-+..||+||..+.
T Consensus 159 s~~k~CGICme~i~ek~~~~~rfgilpnC~H~~Cl~Cir~wr~~~q~-----~~~~sksCP~CRv~s~ 221 (344)
T KOG1039|consen 159 SSEKECGICMETINEKAASERRFGILPNCNHSFCLNCIRKWRQATQF-----ESKTSKSCPFCRVPSS 221 (344)
T ss_pred cccccceehhhhccccchhhhhcccCCCcchhhhhcHhHhhhhhhcc-----ccccccCCCcccCccc
Confidence 55688999999876655 4 789999999999887432211 1222456999996554
No 159
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=87.12 E-value=0.26 Score=50.07 Aligned_cols=47 Identities=32% Similarity=0.673 Sum_probs=32.6
Q ss_pred chhhhhhhhcc---cccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccc
Q 011309 294 DTCAVCLERAC---TVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 351 (489)
Q Consensus 294 ~~C~iCle~~~---~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~ 351 (489)
+.|+||||... .+...||.|.+=..|+-.+=... ...||+|++.|-.
T Consensus 230 ~~CaIClEdY~~GdklRiLPC~H~FH~~CIDpWL~~~-----------r~~CPvCK~di~~ 279 (348)
T KOG4628|consen 230 DTCAICLEDYEKGDKLRILPCSHKFHVNCIDPWLTQT-----------RTFCPVCKRDIRT 279 (348)
T ss_pred ceEEEeecccccCCeeeEecCCCchhhccchhhHhhc-----------CccCCCCCCcCCC
Confidence 69999999865 46889999998555554442111 1249999995543
No 160
>KOG4159 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=86.38 E-value=0.42 Score=49.70 Aligned_cols=51 Identities=25% Similarity=0.625 Sum_probs=38.8
Q ss_pred CcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccccee
Q 011309 292 DADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTK 354 (489)
Q Consensus 292 ~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 354 (489)
..-.|.+|+...=.....+|||.+|..|... |.. ....||.||.++.++..
T Consensus 83 sef~c~vc~~~l~~pv~tpcghs~c~~Cl~r-~ld-----------~~~~cp~Cr~~l~e~~~ 133 (398)
T KOG4159|consen 83 SEFECCVCSRALYPPVVTPCGHSFCLECLDR-SLD-----------QETECPLCRDELVELPA 133 (398)
T ss_pred chhhhhhhHhhcCCCccccccccccHHHHHH-Hhc-----------cCCCCcccccccccchH
Confidence 3456889988888888889999999999766 322 12249999999987543
No 161
>COG5243 HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
Probab=83.17 E-value=0.63 Score=47.06 Aligned_cols=50 Identities=22% Similarity=0.617 Sum_probs=35.5
Q ss_pred CCCcchhhhhhhhc-cc------------ccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccc
Q 011309 290 SDDADTCAVCLERA-CT------------VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 351 (489)
Q Consensus 290 ~~~~~~C~iCle~~-~~------------v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~ 351 (489)
..+...|.+|.|.. -. ..-.||||-+=..|.-.+|-+. -.||+||.+++-
T Consensus 284 ~n~D~~C~ICmde~~h~~~~~~~~~~~~~pKrLpCGHilHl~CLknW~ERq------------QTCPICr~p~if 346 (491)
T COG5243 284 TNSDRTCTICMDEMFHPDHEPLPRGLDMTPKRLPCGHILHLHCLKNWLERQ------------QTCPICRRPVIF 346 (491)
T ss_pred cCCCCeEEEecccccCCCCccCcccccCCcccccccceeeHHHHHHHHHhc------------cCCCcccCcccc
Confidence 46678899999983 22 2678999977666776776333 239999999543
No 162
>KOG0802 consensus E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=82.61 E-value=0.59 Score=51.14 Aligned_cols=44 Identities=25% Similarity=0.572 Sum_probs=38.1
Q ss_pred Ccchhhhhhhhccc-----ccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccc
Q 011309 292 DADTCAVCLERACT-----VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRH 347 (489)
Q Consensus 292 ~~~~C~iCle~~~~-----v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~ 347 (489)
..+.|.||.|..-+ ....+|+|.++..|...+.-.. -.||+||.
T Consensus 290 ~~~~C~IC~e~l~~~~~~~~~rL~C~Hifh~~CL~~W~er~------------qtCP~CR~ 338 (543)
T KOG0802|consen 290 SDELCIICLEELHSGHNITPKRLPCGHIFHDSCLRSWFERQ------------QTCPTCRT 338 (543)
T ss_pred cCCeeeeechhhccccccccceeecccchHHHHHHHHHHHh------------CcCCcchh
Confidence 46889999999988 7999999999999999997552 24999998
No 163
>COG5540 RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=81.48 E-value=0.82 Score=45.08 Aligned_cols=46 Identities=28% Similarity=0.580 Sum_probs=34.4
Q ss_pred cchhhhhhhhc---ccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccc
Q 011309 293 ADTCAVCLERA---CTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 349 (489)
Q Consensus 293 ~~~C~iCle~~---~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I 349 (489)
...|++|++.. -.+.+.||.|+|=+.|.-.+=-.. +.+||+||..|
T Consensus 323 GveCaICms~fiK~d~~~vlPC~H~FH~~Cv~kW~~~y-----------~~~CPvCrt~i 371 (374)
T COG5540 323 GVECAICMSNFIKNDRLRVLPCDHRFHVGCVDKWLLGY-----------SNKCPVCRTAI 371 (374)
T ss_pred CceEEEEhhhhcccceEEEeccCceechhHHHHHHhhh-----------cccCCccCCCC
Confidence 36799998765 336889999999888887774311 23599999876
No 164
>KOG0311 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=81.26 E-value=0.75 Score=46.34 Aligned_cols=57 Identities=30% Similarity=0.593 Sum_probs=42.0
Q ss_pred CCCcchhhhhhhhc-ccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecCC
Q 011309 290 SDDADTCAVCLERA-CTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPG 357 (489)
Q Consensus 290 ~~~~~~C~iCle~~-~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 357 (489)
......|.+||+-. -++-...|+|+||..|+..-=-. +-..||-||...+|-.-|-.
T Consensus 40 ~~~~v~c~icl~llk~tmttkeClhrfc~~ci~~a~r~-----------gn~ecptcRk~l~SkrsLr~ 97 (381)
T KOG0311|consen 40 FDIQVICPICLSLLKKTMTTKECLHRFCFDCIWKALRS-----------GNNECPTCRKKLVSKRSLRI 97 (381)
T ss_pred hhhhhccHHHHHHHHhhcccHHHHHHHHHHHHHHHHHh-----------cCCCCchHHhhccccccCCC
Confidence 45567899999875 45678899999999999875311 12349999999888765543
No 165
>COG5219 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=80.12 E-value=1.3 Score=49.89 Aligned_cols=51 Identities=24% Similarity=0.587 Sum_probs=38.2
Q ss_pred CCCcchhhhhhhhc-------ccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccc
Q 011309 290 SDDADTCAVCLERA-------CTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 350 (489)
Q Consensus 290 ~~~~~~C~iCle~~-------~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~ 350 (489)
.+|.+.|.+|.--. .+-...+|.|.+=++|..++-..+.. ..||+||+.|.
T Consensus 1466 fsG~eECaICYsvL~~vdr~lPskrC~TCknKFH~~CLyKWf~Ss~~----------s~CPlCRseit 1523 (1525)
T COG5219 1466 FSGHEECAICYSVLDMVDRSLPSKRCATCKNKFHTRCLYKWFASSAR----------SNCPLCRSEIT 1523 (1525)
T ss_pred cCCcchhhHHHHHHHHHhccCCccccchhhhhhhHHHHHHHHHhcCC----------CCCCccccccc
Confidence 57899999995332 34466789999999999998644422 34999998886
No 166
>KOG4692 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=79.65 E-value=1 Score=45.33 Aligned_cols=49 Identities=16% Similarity=0.543 Sum_probs=40.1
Q ss_pred CCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccc
Q 011309 291 DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 351 (489)
Q Consensus 291 ~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~ 351 (489)
.+.+.|.||.....+....||+|+-|..|+..-=- +...|=||+..|..
T Consensus 420 sEd~lCpICyA~pi~Avf~PC~H~SC~~CI~qHlm------------N~k~CFfCktTv~~ 468 (489)
T KOG4692|consen 420 SEDNLCPICYAGPINAVFAPCSHRSCYGCITQHLM------------NCKRCFFCKTTVID 468 (489)
T ss_pred cccccCcceecccchhhccCCCCchHHHHHHHHHh------------cCCeeeEecceeee
Confidence 56789999999999999999999998888865422 22349999998875
No 167
>KOG4185 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=79.46 E-value=0.77 Score=46.00 Aligned_cols=51 Identities=29% Similarity=0.664 Sum_probs=36.1
Q ss_pred cccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecCCCCccccCCCcccccC
Q 011309 307 AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGSPVKDIKQPLSLGLC 372 (489)
Q Consensus 307 ~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~~~~~~~~~~~~~~~ 372 (489)
....|||.+|..|+-.+.... .+.|||||... .++...++.++.+.+|...
T Consensus 23 ~~l~c~h~~c~~c~~~l~~~~-----------~i~cpfcR~~~----~~~~~~~~~l~kNf~ll~~ 73 (296)
T KOG4185|consen 23 RVLKCGHTICQNCASKLLGNS-----------RILCPFCRETT----EIPDGDVKSLQKNFALLQA 73 (296)
T ss_pred cccccCceehHhHHHHHhcCc-----------eeeccCCCCcc----cCCchhHhhhhhhHHHHHH
Confidence 455699999999999886333 45699999987 6666666666665444433
No 168
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=76.00 E-value=1.2 Score=41.22 Aligned_cols=51 Identities=18% Similarity=0.410 Sum_probs=37.8
Q ss_pred cchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceec
Q 011309 293 ADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKL 355 (489)
Q Consensus 293 ~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 355 (489)
.-.|.+|.+..-+..+..|||.||..|+...= +..+ .|-+|...--+...+
T Consensus 196 PF~C~iCKkdy~spvvt~CGH~FC~~Cai~~y---------~kg~---~C~~Cgk~t~G~f~V 246 (259)
T COG5152 196 PFLCGICKKDYESPVVTECGHSFCSLCAIRKY---------QKGD---ECGVCGKATYGRFWV 246 (259)
T ss_pred ceeehhchhhccchhhhhcchhHHHHHHHHHh---------ccCC---cceecchhhccceeH
Confidence 34799999999999999999999999997652 1122 388887665554443
No 169
>PF14835 zf-RING_6: zf-RING of BARD1-type protein; PDB: 1JM7_B.
Probab=75.63 E-value=1.4 Score=33.52 Aligned_cols=40 Identities=28% Similarity=0.811 Sum_probs=16.6
Q ss_pred hhhhhhhhcccc-cccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccc
Q 011309 295 TCAVCLERACTV-AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHG 348 (489)
Q Consensus 295 ~C~iCle~~~~v-~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~ 348 (489)
.|.+|.+-.-.. -...|.|.||..|+= .|- . ..||+|+.+
T Consensus 9 rCs~C~~~l~~pv~l~~CeH~fCs~Ci~-~~~----~---------~~CPvC~~P 49 (65)
T PF14835_consen 9 RCSICFDILKEPVCLGGCEHIFCSSCIR-DCI----G---------SECPVCHTP 49 (65)
T ss_dssp S-SSS-S--SS-B---SSS--B-TTTGG-GGT----T---------TB-SSS--B
T ss_pred CCcHHHHHhcCCceeccCccHHHHHHhH-Hhc----C---------CCCCCcCCh
Confidence 467777766554 468999999888872 221 1 139999965
No 170
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=74.58 E-value=1.7 Score=48.10 Aligned_cols=56 Identities=18% Similarity=0.383 Sum_probs=43.1
Q ss_pred CCcchhhhhhhhccc---ccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecCCC
Q 011309 291 DDADTCAVCLERACT---VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGS 358 (489)
Q Consensus 291 ~~~~~C~iCle~~~~---v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~ 358 (489)
.+...|.+|+....+ ..--+|+|.||..|...+|-... .||+||......+++.++
T Consensus 121 ~~~~~CP~Ci~s~~DqL~~~~k~c~H~FC~~Ci~sWsR~aq------------TCPiDR~EF~~v~V~eS~ 179 (1134)
T KOG0825|consen 121 HVENQCPNCLKSCNDQLEESEKHTAHYFCEECVGSWSRCAQ------------TCPVDRGEFGEVKVLEST 179 (1134)
T ss_pred hhhhhhhHHHHHHHHHhhccccccccccHHHHhhhhhhhcc------------cCchhhhhhheeeeeccc
Confidence 456778888766554 46678999999999999984443 399999988888877773
No 171
>PF12861 zf-Apc11: Anaphase-promoting complex subunit 11 RING-H2 finger
Probab=71.36 E-value=3.9 Score=32.97 Aligned_cols=37 Identities=30% Similarity=0.665 Sum_probs=25.5
Q ss_pred ccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccc
Q 011309 304 CTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 349 (489)
Q Consensus 304 ~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I 349 (489)
|.+..-.|+|.|=.+|+...=... .. ...||+||+..
T Consensus 45 Cplv~g~C~H~FH~hCI~kWl~~~-----~~----~~~CPmCR~~w 81 (85)
T PF12861_consen 45 CPLVWGKCSHNFHMHCILKWLSTQ-----SS----KGQCPMCRQPW 81 (85)
T ss_pred CceeeccCccHHHHHHHHHHHccc-----cC----CCCCCCcCCee
Confidence 345556799999999998885321 11 23599999865
No 172
>KOG1813 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=70.41 E-value=1.9 Score=42.58 Aligned_cols=51 Identities=20% Similarity=0.387 Sum_probs=39.5
Q ss_pred chhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecC
Q 011309 294 DTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLP 356 (489)
Q Consensus 294 ~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~ 356 (489)
..|.+|-.-.-+.++..|+|.||..|++.-= +. ..+|++|-+.+-+.....
T Consensus 242 f~c~icr~~f~~pVvt~c~h~fc~~ca~~~~---------qk---~~~c~vC~~~t~g~~~~a 292 (313)
T KOG1813|consen 242 FKCFICRKYFYRPVVTKCGHYFCEVCALKPY---------QK---GEKCYVCSQQTHGSFNVA 292 (313)
T ss_pred ccccccccccccchhhcCCceeehhhhcccc---------cc---CCcceecccccccccchH
Confidence 4589998888889999999999999986441 22 234999999998876544
No 173
>PF14447 Prok-RING_4: Prokaryotic RING finger family 4
Probab=69.30 E-value=1.7 Score=31.85 Aligned_cols=45 Identities=20% Similarity=0.470 Sum_probs=30.1
Q ss_pred CcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccc
Q 011309 292 DADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 350 (489)
Q Consensus 292 ~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~ 350 (489)
....|+.|....-.-.+.+|+|.+|..| -... +-.-||||-..|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~pCgH~I~~~~-----f~~~---------rYngCPfC~~~~~ 50 (55)
T PF14447_consen 6 PEQPCVFCGFVGTKGTVLPCGHLICDNC-----FPGE---------RYNGCPFCGTPFE 50 (55)
T ss_pred cceeEEEccccccccccccccceeeccc-----cChh---------hccCCCCCCCccc
Confidence 3456777777777778999999865543 2221 1234999998775
No 174
>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]
Probab=66.87 E-value=2.5 Score=46.93 Aligned_cols=49 Identities=24% Similarity=0.528 Sum_probs=36.7
Q ss_pred CCCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccc
Q 011309 290 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 349 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I 349 (489)
..+.-.|.+|.++.=+++...|+|-||-.|.-..=-+ +.-.||-|-..-
T Consensus 640 yK~~LkCs~Cn~R~Kd~vI~kC~H~FC~~Cvq~r~et-----------RqRKCP~Cn~aF 688 (698)
T KOG0978|consen 640 YKELLKCSVCNTRWKDAVITKCGHVFCEECVQTRYET-----------RQRKCPKCNAAF 688 (698)
T ss_pred HHhceeCCCccCchhhHHHHhcchHHHHHHHHHHHHH-----------hcCCCCCCCCCC
Confidence 3556779999999999999999999988887544211 223599997653
No 175
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]
Probab=63.72 E-value=3.4 Score=43.03 Aligned_cols=44 Identities=32% Similarity=0.698 Sum_probs=29.9
Q ss_pred CCCcchhhhhhhhccc----ccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccc
Q 011309 290 SDDADTCAVCLERACT----VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRH 347 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~----v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~ 347 (489)
....-.|.|||||.-. +....|.|.| +|.|.. -+.-..||+||-
T Consensus 172 ~tELPTCpVCLERMD~s~~gi~t~~c~Hsf--h~~cl~------------~w~~~scpvcR~ 219 (493)
T KOG0804|consen 172 LTELPTCPVCLERMDSSTTGILTILCNHSF--HCSCLM------------KWWDSSCPVCRY 219 (493)
T ss_pred cccCCCcchhHhhcCccccceeeeeccccc--chHHHh------------hcccCcChhhhh
Confidence 3556789999999853 3788999987 333222 123335999994
No 176
>KOG2879 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=62.74 E-value=5.5 Score=38.96 Aligned_cols=54 Identities=24% Similarity=0.522 Sum_probs=38.6
Q ss_pred CCCcchhhhhhhhcccc-cccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccce
Q 011309 290 SDDADTCAVCLERACTV-AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFT 353 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v-~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 353 (489)
......|.+|-+..... ...+|+|..|.-|+-.-|-.. .+-.||.|-+++..+.
T Consensus 236 ~t~~~~C~~Cg~~PtiP~~~~~C~HiyCY~Ci~ts~~~~----------asf~Cp~Cg~~~~~lq 290 (298)
T KOG2879|consen 236 GTSDTECPVCGEPPTIPHVIGKCGHIYCYYCIATSRLWD----------ASFTCPLCGENVEPLQ 290 (298)
T ss_pred ccCCceeeccCCCCCCCeeeccccceeehhhhhhhhcch----------hhcccCccCCCCcchh
Confidence 34557899999888665 455699998877776665222 1224999999988776
No 177
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=56.38 E-value=34 Score=40.74 Aligned_cols=36 Identities=31% Similarity=0.407 Sum_probs=27.0
Q ss_pred CCcHHHHHHHcCC-----HHHHHHHHH--cCCCCCccCCCCCc
Q 011309 197 GSTPLHFAACGGN-----LKCCQVLLS--RGASRMSLNCNGWL 232 (489)
Q Consensus 197 G~TpLh~Aa~~g~-----~eivk~LL~--~Gadvn~~d~~G~T 232 (489)
+.|.|++|+..+. -++++.||. +-.++.+++...+-
T Consensus 656 ~~tCL~LAv~a~~r~FiAH~c~Q~lLt~~W~G~L~~r~~~~~k 698 (1381)
T KOG3614|consen 656 NSTCLQLAVEANAREFIAHPCCQMLLTDKWYGNLQARNNPIWK 698 (1381)
T ss_pred cccHHHHHHhcCCCceeccHhHHHHHHHHHhccccccCCCcHH
Confidence 8899999999886 468899985 45567677655543
No 178
>KOG1001 consensus Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily [Transcription; Replication, recombination and repair]
Probab=55.11 E-value=5.4 Score=44.69 Aligned_cols=53 Identities=26% Similarity=0.634 Sum_probs=39.6
Q ss_pred chhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecCC
Q 011309 294 DTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPG 357 (489)
Q Consensus 294 ~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 357 (489)
-.|.+|++ ........|+|.+|..|....= ...... +||.||+.|..-..+..
T Consensus 455 ~~c~ic~~-~~~~~it~c~h~~c~~c~~~~i------~~~~~~----~~~~cr~~l~~~~l~s~ 507 (674)
T KOG1001|consen 455 HWCHICCD-LDSFFITRCGHDFCVECLKKSI------QQSENA----PCPLCRNVLKEKKLLSA 507 (674)
T ss_pred cccccccc-cccceeecccchHHHHHHHhcc------ccccCC----CCcHHHHHHHHHHHhhc
Confidence 67999999 7778889999999999886552 111111 69999999987765554
No 179
>PF03002 Somatostatin: Somatostatin/Cortistatin family; InterPro: IPR018142 Somatostatin inhibits the release of the pituitary growth hormone, somatotropin and inhibits the release of glucagon and insulin from the pancreas of fasted animals. Cortistatin is a cortical neuropeptide with neuronal depressant and sleep-modulating properties [].; GO: 0005179 hormone activity, 0005576 extracellular region
Probab=51.86 E-value=7.1 Score=21.71 Aligned_cols=14 Identities=21% Similarity=0.729 Sum_probs=11.1
Q ss_pred cccccccccccccc
Q 011309 462 LERTTCSSMFWGRR 475 (489)
Q Consensus 462 ~~~~~~~~~~~~~~ 475 (489)
.+|+-|..+||--+
T Consensus 2 ~~k~~CknffWK~~ 15 (18)
T PF03002_consen 2 ERKAGCKNFFWKTF 15 (18)
T ss_pred cccccccceeeccc
Confidence 46788999999654
No 180
>KOG4739 consensus Uncharacterized protein involved in synaptonemal complex formation [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=51.47 E-value=8.1 Score=37.17 Aligned_cols=48 Identities=27% Similarity=0.692 Sum_probs=30.0
Q ss_pred hhhhhhhhc--ccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecCC
Q 011309 295 TCAVCLERA--CTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPG 357 (489)
Q Consensus 295 ~C~iCle~~--~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 357 (489)
.|-.|+-+. -......|+|-||..|.=.- .++ .||+||.. .+.++|-.
T Consensus 5 hCn~C~~~~~~~~f~LTaC~HvfC~~C~k~~-----------~~~---~C~lCkk~-ir~i~l~~ 54 (233)
T KOG4739|consen 5 HCNKCFRFPSQDPFFLTACRHVFCEPCLKAS-----------SPD---VCPLCKKS-IRIIQLNR 54 (233)
T ss_pred EeccccccCCCCceeeeechhhhhhhhcccC-----------Ccc---ccccccce-eeeeeccc
Confidence 344554433 23477899999888776211 111 69999998 56666544
No 181
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=50.85 E-value=4.8 Score=31.37 Aligned_cols=57 Identities=11% Similarity=0.032 Sum_probs=37.9
Q ss_pred cchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecCCCCc
Q 011309 293 ADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGSPV 360 (489)
Q Consensus 293 ~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~~~ 360 (489)
.-.|.++.+-.-+....++||.++..|+...-.. +...||+||..+..-.-+|...+
T Consensus 4 ~f~CpIt~~lM~dPVi~~~G~tyer~~I~~~l~~-----------~~~~~P~t~~~l~~~~l~pn~~L 60 (73)
T PF04564_consen 4 EFLCPITGELMRDPVILPSGHTYERSAIERWLEQ-----------NGGTDPFTRQPLSESDLIPNRAL 60 (73)
T ss_dssp GGB-TTTSSB-SSEEEETTSEEEEHHHHHHHHCT-----------TSSB-TTT-SB-SGGGSEE-HHH
T ss_pred ccCCcCcCcHhhCceeCCcCCEEcHHHHHHHHHc-----------CCCCCCCCCCcCCcccceECHHH
Confidence 3468888888888889999999999999888633 22359999998887555554333
No 182
>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=50.07 E-value=9.4 Score=42.29 Aligned_cols=52 Identities=31% Similarity=0.636 Sum_probs=38.8
Q ss_pred hhhhhhhhcccccccCCcc-hhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccc
Q 011309 295 TCAVCLERACTVAAEGCRH-ELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSF 352 (489)
Q Consensus 295 ~C~iCle~~~~v~~~~C~H-~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 352 (489)
-|.+|-...--+....|+| ++|+.|+..+=.--+ .+--.+-||+||..+.-.
T Consensus 2 ~c~ic~~s~~~~~~~s~~h~~v~~~~~~R~~~~~~------~~~~~~~~~vcr~~~~~~ 54 (669)
T KOG2231|consen 2 SCAICAFSPDFVGRGSCGHNEVCATCVVRLRFELN------NRKCSNECPVCRREVETK 54 (669)
T ss_pred CcceeecCccccccccccccccchhhhhhhhhhcc------cccccccCcccccceeee
Confidence 4788888888899999999 999999988843322 122356799999865544
No 183
>COG5175 MOT2 Transcriptional repressor [Transcription]
Probab=43.16 E-value=11 Score=37.99 Aligned_cols=61 Identities=25% Similarity=0.521 Sum_probs=39.6
Q ss_pred CCCCcchhhhhhhhccc----ccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccc----ccceecCCCCc
Q 011309 289 SSDDADTCAVCLERACT----VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI----VSFTKLPGSPV 360 (489)
Q Consensus 289 ~~~~~~~C~iCle~~~~----v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I----~~~~~~~~~~~ 360 (489)
++.+.|.|..|+|..-. ...-+||-++ |..|.++.+.- . . -.||.||+.- ++|+.|.+..|
T Consensus 10 sedeed~cplcie~mditdknf~pc~cgy~i-----c~fc~~~irq~-l--n---grcpacrr~y~denv~~~~~s~ee~ 78 (480)
T COG5175 10 SEDEEDYCPLCIEPMDITDKNFFPCPCGYQI-----CQFCYNNIRQN-L--N---GRCPACRRKYDDENVRYVTLSPEEL 78 (480)
T ss_pred cccccccCcccccccccccCCcccCCcccHH-----HHHHHHHHHhh-c--c---CCChHhhhhccccceeEEecCHHHH
Confidence 66777889999998743 2445677775 55666653211 1 1 1499999754 67887777544
No 184
>KOG3002 consensus Zn finger protein [General function prediction only]
Probab=42.21 E-value=15 Score=36.92 Aligned_cols=50 Identities=26% Similarity=0.466 Sum_probs=33.2
Q ss_pred CCCCcchhhhhhhhccc-ccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccce
Q 011309 289 SSDDADTCAVCLERACT-VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFT 353 (489)
Q Consensus 289 ~~~~~~~C~iCle~~~~-v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 353 (489)
...+.-.|.+|++..-. +.--+=||..|..|.-.+ +..||+||-+|..+.
T Consensus 44 ~~~~lleCPvC~~~l~~Pi~QC~nGHlaCssC~~~~---------------~~~CP~Cr~~~g~~R 94 (299)
T KOG3002|consen 44 LDLDLLDCPVCFNPLSPPIFQCDNGHLACSSCRTKV---------------SNKCPTCRLPIGNIR 94 (299)
T ss_pred cchhhccCchhhccCcccceecCCCcEehhhhhhhh---------------cccCCccccccccHH
Confidence 34566779999987733 333345798666555322 345999999998763
No 185
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=40.84 E-value=50 Score=35.21 Aligned_cols=107 Identities=19% Similarity=0.143 Sum_probs=65.3
Q ss_pred chHHHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHH-HHHHHhCcHHHHHHHHHcCCCCCCcCCCCCcccccCCCC
Q 011309 10 SGERLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPL-HFAAAKGHNEIVALLLENGADVNSRNYCGQVTRADYLSG 88 (489)
Q Consensus 10 s~t~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpL-h~Aa~~G~~eivk~LLe~Gad~n~~d~~g~i~~~d~~~G 88 (489)
..+.+-.|.+.|+++.+..+.+.-.+... |.-| ..|...|++++++.-+++.-|.+
T Consensus 321 ~~~rFeLAl~lg~L~~A~~~a~~~~~~~~-------W~~Lg~~AL~~g~~~lAe~c~~k~~d~~---------------- 377 (443)
T PF04053_consen 321 PDHRFELALQLGNLDIALEIAKELDDPEK-------WKQLGDEALRQGNIELAEECYQKAKDFS---------------- 377 (443)
T ss_dssp HHHHHHHHHHCT-HHHHHHHCCCCSTHHH-------HHHHHHHHHHTTBHHHHHHHHHHCT-HH----------------
T ss_pred hHHHhHHHHhcCCHHHHHHHHHhcCcHHH-------HHHHHHHHHHcCCHHHHHHHHHhhcCcc----------------
Confidence 35678888888888888877765443221 3333 45667788888888877644332
Q ss_pred ChHHHHHHHcCCHHHHHHHHHccCCCCCccccccccccccCCchhhhhhhhhhhhhhhhccccCCCccHHHHHHHcCCH-
Q 011309 89 RTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYF- 167 (489)
Q Consensus 89 ~TpLh~Aa~~g~~~~vk~LL~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~- 167 (489)
..|.+....|+.+-++.|.+.. ....+-+.+++.|...|+.
T Consensus 378 -~L~lLy~~~g~~~~L~kl~~~a-------------------------------------~~~~~~n~af~~~~~lgd~~ 419 (443)
T PF04053_consen 378 -GLLLLYSSTGDREKLSKLAKIA-------------------------------------EERGDINIAFQAALLLGDVE 419 (443)
T ss_dssp -HHHHHHHHCT-HHHHHHHHHHH-------------------------------------HHTT-HHHHHHHHHHHT-HH
T ss_pred -ccHHHHHHhCCHHHHHHHHHHH-------------------------------------HHccCHHHHHHHHHHcCCHH
Confidence 3456677778877777776320 0011223567777777776
Q ss_pred HHHHHHHhcC
Q 011309 168 DCVQLLLDLH 177 (489)
Q Consensus 168 e~v~~LL~~G 177 (489)
+++++|++.|
T Consensus 420 ~cv~lL~~~~ 429 (443)
T PF04053_consen 420 ECVDLLIETG 429 (443)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 5889998764
No 186
>PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B.
Probab=38.95 E-value=27 Score=24.99 Aligned_cols=32 Identities=22% Similarity=0.485 Sum_probs=12.7
Q ss_pred ccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccc
Q 011309 306 VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHG 348 (489)
Q Consensus 306 v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~ 348 (489)
+..=+|++++|..|-...-. . ..-.||-||..
T Consensus 15 ~~PC~Cgf~IC~~C~~~i~~------~-----~~g~CPgCr~~ 46 (48)
T PF14570_consen 15 FYPCECGFQICRFCYHDILE------N-----EGGRCPGCREP 46 (48)
T ss_dssp --SSTTS----HHHHHHHTT------S-----S-SB-TTT--B
T ss_pred cccCcCCCcHHHHHHHHHHh------c-----cCCCCCCCCCC
Confidence 34456889987777555421 1 12359999975
No 187
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=38.44 E-value=13 Score=41.58 Aligned_cols=63 Identities=11% Similarity=0.186 Sum_probs=42.8
Q ss_pred Ccchhhhhhhh----cccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecCCC-Cc
Q 011309 292 DADTCAVCLER----ACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGS-PV 360 (489)
Q Consensus 292 ~~~~C~iCle~----~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~-~~ 360 (489)
.-..|.+|+-. .-.--+..|+|++|..|+...-..- ...+....|+||.+.|.+|.++.-+ |+
T Consensus 98 Ss~~C~~E~S~~~ds~~i~P~~~~~~~~CP~Ci~s~~DqL------~~~~k~c~H~FC~~Ci~sWsR~aqTCPi 165 (1134)
T KOG0825|consen 98 TSPVCEKEHSPDVDSSNICPVQTHVENQCPNCLKSCNDQL------EESEKHTAHYFCEECVGSWSRCAQTCPV 165 (1134)
T ss_pred ccchhheecCCcccccCcCchhhhhhhhhhHHHHHHHHHh------hccccccccccHHHHhhhhhhhcccCch
Confidence 33556666544 2233556799999999998774332 2233445699999999999998873 44
No 188
>KOG1002 consensus Nucleotide excision repair protein RAD16 [Replication, recombination and repair]
Probab=36.67 E-value=15 Score=39.14 Aligned_cols=53 Identities=21% Similarity=0.591 Sum_probs=37.9
Q ss_pred CCCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccc
Q 011309 290 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 349 (489)
Q Consensus 290 ~~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I 349 (489)
..+...|.+|-|..-+.....|.|.||.-|.-..=.... ..-+ ..||.|--+.
T Consensus 533 nk~~~~C~lc~d~aed~i~s~ChH~FCrlCi~eyv~~f~------~~~n-vtCP~C~i~L 585 (791)
T KOG1002|consen 533 NKGEVECGLCHDPAEDYIESSCHHKFCRLCIKEYVESFM------ENNN-VTCPVCHIGL 585 (791)
T ss_pred ccCceeecccCChhhhhHhhhhhHHHHHHHHHHHHHhhh------cccC-CCCccccccc
Confidence 456788999999999999999999999888744321111 1112 4699998554
No 189
>KOG1812 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=35.67 E-value=32 Score=35.95 Aligned_cols=50 Identities=20% Similarity=0.412 Sum_probs=31.9
Q ss_pred HHHHHHHcCCccccccCCCCcchhhhhhhhc----ccccccCCcchhhhhHHHHhh
Q 011309 273 VLNVARECGLLSSTTSSSDDADTCAVCLERA----CTVAAEGCRHELCVRCALYLC 324 (489)
Q Consensus 273 ~l~~a~~~G~~~~~~a~~~~~~~C~iCle~~----~~v~~~~C~H~~C~~C~~~lC 324 (489)
+++.|++.... ..........|.+|+... -......|+|++|..|.-...
T Consensus 128 ~~~lA~e~i~s--~~~~~~~~~~C~iC~~e~~~~~~~f~~~~C~H~fC~~C~k~~i 181 (384)
T KOG1812|consen 128 AYKLAREAIVS--QLPSKLPKEECGICFVEDPEAEDMFSVLKCGHRFCKDCVKQHI 181 (384)
T ss_pred HHHHHHHhhcc--ccccccccccCccCccccccHhhhHHHhcccchhhhHHhHHHh
Confidence 35555555443 222344578899998222 122378899999999997664
No 190
>KOG2932 consensus E3 ubiquitin ligase involved in ubiquitination of E-cadherin complex [Posttranslational modification, protein turnover, chaperones]
Probab=35.54 E-value=14 Score=36.82 Aligned_cols=34 Identities=26% Similarity=0.663 Sum_probs=25.3
Q ss_pred cccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCccccccccee
Q 011309 307 AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTK 354 (489)
Q Consensus 307 ~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 354 (489)
..-+|.|-||..||...= -+-||.|-..|.+.-.
T Consensus 105 RmIPCkHvFCl~CAr~~~--------------dK~Cp~C~d~VqrIeq 138 (389)
T KOG2932|consen 105 RMIPCKHVFCLECARSDS--------------DKICPLCDDRVQRIEQ 138 (389)
T ss_pred cccccchhhhhhhhhcCc--------------cccCcCcccHHHHHHH
Confidence 556999999999985441 2349999988877643
No 191
>TIGR02652 conserved hypothetical protein TIGR02652, cyanobacterial. Members of this family of conserved hypothetical proteins are found, so far, only in the Cyanobacteria. Members are about 170 amino acids long and share a motif CxxCx(14)CxxH near the amino end.
Probab=35.49 E-value=15 Score=32.22 Aligned_cols=16 Identities=44% Similarity=0.926 Sum_probs=13.3
Q ss_pred CCCCCCCcccccccce
Q 011309 338 GSIPCPLCRHGIVSFT 353 (489)
Q Consensus 338 ~~~~CP~CR~~I~~~~ 353 (489)
..|.||.||+.|.-++
T Consensus 8 pei~CPhCRQ~ipALt 23 (163)
T TIGR02652 8 PEIRCPHCRQNIPALT 23 (163)
T ss_pred CcCcCchhhcccchhe
Confidence 4789999999987764
No 192
>PF14369 zf-RING_3: zinc-finger
Probab=35.47 E-value=19 Score=23.92 Aligned_cols=10 Identities=40% Similarity=1.285 Sum_probs=7.5
Q ss_pred CCCCCccccc
Q 011309 340 IPCPLCRHGI 349 (489)
Q Consensus 340 ~~CP~CR~~I 349 (489)
+.||.|.++.
T Consensus 22 ~~CP~C~~gF 31 (35)
T PF14369_consen 22 VACPRCHGGF 31 (35)
T ss_pred cCCcCCCCcE
Confidence 3599999764
No 193
>PF09654 DUF2396: Protein of unknown function (DUF2396); InterPro: IPR013472 These conserved hypothetical proteins have so far been found only in the Cyanobacteria. They are about 170 amino acids long and contain a CxxCx(14)CxxH motif near the N terminus.
Probab=32.10 E-value=19 Score=31.59 Aligned_cols=16 Identities=44% Similarity=0.910 Sum_probs=13.1
Q ss_pred CCCCCCCcccccccce
Q 011309 338 GSIPCPLCRHGIVSFT 353 (489)
Q Consensus 338 ~~~~CP~CR~~I~~~~ 353 (489)
..|.||.||+.|--++
T Consensus 5 pei~CPhCRq~ipALt 20 (161)
T PF09654_consen 5 PEIQCPHCRQTIPALT 20 (161)
T ss_pred CcCcCchhhcccchhe
Confidence 4688999999987664
No 194
>KOG0297 consensus TNF receptor-associated factor [Signal transduction mechanisms]
Probab=31.69 E-value=24 Score=36.96 Aligned_cols=53 Identities=26% Similarity=0.669 Sum_probs=39.4
Q ss_pred Ccchhhhhhhhcccccc-cCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccceecC
Q 011309 292 DADTCAVCLERACTVAA-EGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLP 356 (489)
Q Consensus 292 ~~~~C~iCle~~~~v~~-~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~ 356 (489)
..-.|.+|..-.++... ..|||.+|+.|....=.. +..||.||+.+..-..+|
T Consensus 20 ~~l~C~~C~~vl~~p~~~~~cgh~fC~~C~~~~~~~------------~~~cp~~~~~~~~~~~~~ 73 (391)
T KOG0297|consen 20 ENLLCPICMSVLRDPVQTTTCGHRFCAGCLLESLSN------------HQKCPVCRQELTQAEELP 73 (391)
T ss_pred ccccCccccccccCCCCCCCCCCcccccccchhhcc------------CcCCcccccccchhhccC
Confidence 33567888777777666 499999999988665211 235999999988887777
No 195
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=30.95 E-value=4.8e+02 Score=29.28 Aligned_cols=55 Identities=20% Similarity=0.249 Sum_probs=30.2
Q ss_pred HHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcHH----HHHHHHHcCCCCC
Q 011309 14 LVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNE----IVALLLENGADVN 72 (489)
Q Consensus 14 L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~e----ivk~LLe~Gad~n 72 (489)
+...++.|+++.+..+++.-+..+... . ++.+..-++.|+.+ +++.+++.|..++
T Consensus 165 i~~y~k~g~~~~A~~lf~~m~~~~~~t--~--n~li~~~~~~g~~~~A~~lf~~M~~~g~~p~ 223 (697)
T PLN03081 165 LLMHVKCGMLIDARRLFDEMPERNLAS--W--GTIIGGLVDAGNYREAFALFREMWEDGSDAE 223 (697)
T ss_pred HHHHhcCCCHHHHHHHHhcCCCCCeee--H--HHHHHHHHHCcCHHHHHHHHHHHHHhCCCCC
Confidence 555567788888888887655433221 1 34444445566543 3333445565554
No 196
>KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms]
Probab=27.31 E-value=26 Score=42.06 Aligned_cols=61 Identities=25% Similarity=0.557 Sum_probs=36.5
Q ss_pred CCCcchhhhhhhhcc---cccccCCcchhhhhHHHHhhhcC-CCCCCCCCCCCCCCCCCcccccccce
Q 011309 290 SDDADTCAVCLERAC---TVAAEGCRHELCVRCALYLCSTN-NIPSEMVGPPGSIPCPLCRHGIVSFT 353 (489)
Q Consensus 290 ~~~~~~C~iCle~~~---~v~~~~C~H~~C~~C~~~lC~~~-~~~~~~~~~~~~~~CP~CR~~I~~~~ 353 (489)
..+.|.|+|||-+.- ...-.+|+|.|=.+|.-..--+. +.... .-+-+.||+|++.|...+
T Consensus 3483 QD~DDmCmICFTE~L~AAP~IqL~C~HiFHlqC~R~vLE~RW~GPRI---tF~FisCPiC~n~InH~~ 3547 (3738)
T KOG1428|consen 3483 QDADDMCMICFTEALSAAPAIQLDCSHIFHLQCCRRVLENRWLGPRI---TFGFISCPICKNKINHIV 3547 (3738)
T ss_pred cccCceEEEEehhhhCCCcceecCCccchhHHHHHHHHHhcccCCee---EEeeeecccccchhhhHH
Confidence 456789999997653 33567999987333222211111 11111 125678999999998764
No 197
>KOG3799 consensus Rab3 effector RIM1 and related proteins, contain Rab3a binding domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.35 E-value=39 Score=29.54 Aligned_cols=58 Identities=28% Similarity=0.565 Sum_probs=35.9
Q ss_pred CCcchhhhhhhhcccccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccc
Q 011309 291 DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSF 352 (489)
Q Consensus 291 ~~~~~C~iCle~~~~v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 352 (489)
.+.-.|.||+. +-.+.+||| .|.-|-+..|.++-...+....-.-..|-+||-...=+
T Consensus 63 ~ddatC~IC~K---TKFADG~GH-~C~YCq~r~CARCGGrv~lrsNKv~wvcnlc~k~q~il 120 (169)
T KOG3799|consen 63 GDDATCGICHK---TKFADGCGH-NCSYCQTRFCARCGGRVSLRSNKVMWVCNLCRKQQEIL 120 (169)
T ss_pred CcCcchhhhhh---cccccccCc-ccchhhhhHHHhcCCeeeeccCceEEeccCCcHHHHHH
Confidence 45567888874 457889999 58888888887774333222222223577777544433
No 198
>PLN03218 maturation of RBCL 1; Provisional
Probab=26.01 E-value=3.3e+02 Score=32.58 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=32.6
Q ss_pred HHHHHHcCCHH----HHHHHHhcCCCcccccccCCCccccCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCCc
Q 011309 158 LHMAALNGYFD----CVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL----SRGASRMS 225 (489)
Q Consensus 158 Lh~Aa~~g~~e----~v~~LL~~Gadvn~~~~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk~LL----~~Gadvn~ 225 (489)
+..-+..|+.+ +++.+.+.|..++.... .+.|...+..|.++.+..|+ +.|..++.
T Consensus 726 I~gy~k~G~~eeAlelf~eM~~~Gi~Pd~~Ty------------~sLL~a~~k~G~le~A~~l~~~M~k~Gi~pd~ 789 (1060)
T PLN03218 726 ITALCEGNQLPKALEVLSEMKRLGLCPNTITY------------SILLVASERKDDADVGLDLLSQAKEDGIKPNL 789 (1060)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHcCCCCCHHHH------------HHHHHHHHHCCCHHHHHHHHHHHHHcCCCCCH
Confidence 33344567655 34444456777776553 25666666778876655554 45766653
No 199
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=25.32 E-value=1.2e+02 Score=29.12 Aligned_cols=42 Identities=36% Similarity=0.362 Sum_probs=36.3
Q ss_pred HHHcCCCCCCcCCCCCcccccCCCCChHHHHHHHcCCHHHHHHHHHccCCCC
Q 011309 64 LLENGADVNSRNYCGQVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSV 115 (489)
Q Consensus 64 LLe~Gad~n~~d~~g~i~~~d~~~G~TpLh~Aa~~g~~~~vk~LL~~~~~~~ 115 (489)
|++.|+--|..|+ ...|+=.+|...|+.+.-+.|++.+.++.
T Consensus 1 lle~ga~wn~id~----------~n~t~gd~a~ern~~rly~~lv~~gv~Se 42 (271)
T KOG1709|consen 1 LLEYGAGWNFIDY----------ENKTVGDLALERNQSRLYRRLVEAGVPSE 42 (271)
T ss_pred CcccCCCccccCh----------hhCCchHHHHHccHHHHHHHHHHcCCchh
Confidence 5678888888887 88899999999999999999998876544
No 200
>KOG0298 consensus DEAD box-containing helicase-like transcription factor/DNA repair protein [Replication, recombination and repair]
Probab=24.68 E-value=35 Score=40.52 Aligned_cols=55 Identities=29% Similarity=0.651 Sum_probs=42.9
Q ss_pred CCcchhhhhhhhccc-ccccCCcchhhhhHHHHhhhcCCCCCCCCCCCCCCCCCCcccccccc-eecCC
Q 011309 291 DDADTCAVCLERACT-VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSF-TKLPG 357 (489)
Q Consensus 291 ~~~~~C~iCle~~~~-v~~~~C~H~~C~~C~~~lC~~~~~~~~~~~~~~~~~CP~CR~~I~~~-~~~~~ 357 (489)
.+.-.|.+|+|..+. -..-.|||++|.+|....=.... .||.|.+-+.+| .|++.
T Consensus 1151 ~~~~~c~ic~dil~~~~~I~~cgh~~c~~c~~~~l~~~s------------~~~~~ksi~~dfg~kI~~ 1207 (1394)
T KOG0298|consen 1151 SGHFVCEICLDILRNQGGIAGCGHEPCCRCDELWLYASS------------RCPICKSIKGDFGTKIDS 1207 (1394)
T ss_pred hcccchHHHHHHHHhcCCeeeechhHhhhHHHHHHHHhc------------cCcchhhhhhhhccCchh
Confidence 445589999999984 47789999999999988754443 399999888887 56665
No 201
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=24.40 E-value=14 Score=39.46 Aligned_cols=77 Identities=17% Similarity=0.121 Sum_probs=56.4
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcC-CCcccccccCCCccccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCccCC
Q 011309 153 GGITALHMAALNGYFDCVQLLLDLH-ANVSAVTFHYGTSMDLIGAGSTPLHFAACG---GNLKCCQVLLSRGASRMSLNC 228 (489)
Q Consensus 153 ~G~TpLh~Aa~~g~~e~v~~LL~~G-advn~~~~~~~~~~~~~~~G~TpLh~Aa~~---g~~eivk~LL~~Gadvn~~d~ 228 (489)
+..|+|++|+..|..+++.+++..+ .+++..-.+ |.+ |-|+.+ |.+|.+..|+.+++..+.+|.
T Consensus 57 ~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~----------~~~--~C~~~g~s~~~~e~~~hL~~~k~~~~~tda 124 (528)
T KOG1595|consen 57 NQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPD----------GDE--HCAVLGRSVGDTERTYHLRYYKTLPCVTDA 124 (528)
T ss_pred ccccccchhhhcCccccccceeecchhhccccCCC----------Ccc--cchhcccccCCcceeEeccccccccCcccc
Confidence 4679999999999999999998765 455544433 555 555543 567888899999999999998
Q ss_pred CCCcHH---HHHHHcC
Q 011309 229 NGWLPL---DVARMWG 241 (489)
Q Consensus 229 ~G~TpL---~~A~~~g 241 (489)
.|.-+- |-|...+
T Consensus 125 ~g~~~~~v~~~~~~~~ 140 (528)
T KOG1595|consen 125 RGNCVKNVLHCAFAHG 140 (528)
T ss_pred CCCcccCcccccccCC
Confidence 887654 4444443
No 202
>KOG1814 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=23.98 E-value=33 Score=35.69 Aligned_cols=32 Identities=22% Similarity=0.528 Sum_probs=25.5
Q ss_pred Ccchhhhhhhhccc---ccccCCcchhhhhHHHHh
Q 011309 292 DADTCAVCLERACT---VAAEGCRHELCVRCALYL 323 (489)
Q Consensus 292 ~~~~C~iCle~~~~---v~~~~C~H~~C~~C~~~l 323 (489)
..-.|.||++..-. +..+||+|-+|-.|+-..
T Consensus 183 slf~C~ICf~e~~G~~c~~~lpC~Hv~Ck~C~kdY 217 (445)
T KOG1814|consen 183 SLFDCCICFEEQMGQHCFKFLPCSHVFCKSCLKDY 217 (445)
T ss_pred hcccceeeehhhcCcceeeecccchHHHHHHHHHH
Confidence 34568999988654 688999999999998654
No 203
>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family. This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.
Probab=22.18 E-value=61 Score=23.04 Aligned_cols=25 Identities=20% Similarity=0.368 Sum_probs=16.1
Q ss_pred CCCCCCCccc-ccccceecCCCCccc
Q 011309 338 GSIPCPLCRH-GIVSFTKLPGSPVKD 362 (489)
Q Consensus 338 ~~~~CP~CR~-~I~~~~~~~~~~~~~ 362 (489)
..+.||.|.+ .+.+.+.-|+-.+|+
T Consensus 25 ~~~~CP~Cg~~~~~r~~s~~~~~~~~ 50 (52)
T TIGR02605 25 PLATCPECGGEKLRRLLSAVGFALKG 50 (52)
T ss_pred CCCCCCCCCCCceeEEeccccEeecC
Confidence 3467999998 566666655544443
No 204
>PLN03077 Protein ECB2; Provisional
Probab=21.78 E-value=6.8e+02 Score=28.85 Aligned_cols=58 Identities=21% Similarity=0.166 Sum_probs=32.6
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCCcccCCCCCCchHHHHHHHhCcH----HHHHHHHHcCCCCCCc
Q 011309 13 RLVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHN----EIVALLLENGADVNSR 74 (489)
Q Consensus 13 ~L~~Aa~~G~~~~Vk~LL~~g~~l~~~~~~~~g~TpLh~Aa~~G~~----eivk~LLe~Gad~n~~ 74 (489)
-+...++.|+++.+..+++.-+..+... . ++-+..-++.|.. ++++.+.+.|..+|..
T Consensus 228 Li~~y~k~g~~~~A~~lf~~m~~~d~~s--~--n~li~~~~~~g~~~eAl~lf~~M~~~g~~Pd~~ 289 (857)
T PLN03077 228 LITMYVKCGDVVSARLVFDRMPRRDCIS--W--NAMISGYFENGECLEGLELFFTMRELSVDPDLM 289 (857)
T ss_pred HHHHHhcCCCHHHHHHHHhcCCCCCcch--h--HHHHHHHHhCCCHHHHHHHHHHHHHcCCCCChh
Confidence 3556677899998888888755433321 1 3333434455554 3334444567666643
No 205
>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]
Probab=20.81 E-value=37 Score=24.42 Aligned_cols=13 Identities=38% Similarity=0.897 Sum_probs=10.3
Q ss_pred CCCCCCCCccccc
Q 011309 337 PGSIPCPLCRHGI 349 (489)
Q Consensus 337 ~~~~~CP~CR~~I 349 (489)
-..+.||.|..-|
T Consensus 22 ~~~irCp~Cg~rI 34 (49)
T COG1996 22 TRGIRCPYCGSRI 34 (49)
T ss_pred cCceeCCCCCcEE
Confidence 3467899999877
No 206
>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines. Several members are annotated as putative helicases.
Probab=20.72 E-value=67 Score=19.80 Aligned_cols=8 Identities=38% Similarity=1.178 Sum_probs=4.7
Q ss_pred CCCccccc
Q 011309 342 CPLCRHGI 349 (489)
Q Consensus 342 CP~CR~~I 349 (489)
||-|+..|
T Consensus 3 CP~C~~~V 10 (26)
T PF10571_consen 3 CPECGAEV 10 (26)
T ss_pred CCCCcCCc
Confidence 66666555
Done!