BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011311
(489 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/494 (46%), Positives = 313/494 (63%), Gaps = 42/494 (8%)
Query: 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDN 60
+ + +EL+FIP+P +GHL S + FAK L D++ ITV ++ +D
Sbjct: 6 INKNSELIFIPAPGIGHLASALEFAKLLTNHDKN--------LYITVFCIKFPGMPFAD- 56
Query: 61 DAHIKSLAGAGATADVSIRFIGVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHV 120
++IKS+ + I+ I +P++ PPP + KSPE +I +++S +K A I+ +
Sbjct: 57 -SYIKSVLASQP----QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVK-ATIKTI 110
Query: 121 LNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGFVLHLPTRXXXXXXXXXX 180
L+N K+ GLVLDFFC SMID NE G+PSY+F TS FL +L L R
Sbjct: 111 LSN--KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSD 168
Query: 181 XXXXIFTY---ANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAV 237
+ +N VP VLP CFNK GG+ A+ RF++TKGIIVNTF +LE ++
Sbjct: 169 RDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSI 228
Query: 238 EYLMKCD-GVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSM 296
+ L D +PP+Y VGP++DL G P+ Q D I++WLD+QP SVVFLCFGSM
Sbjct: 229 DALYDHDEKIPPIYAVGPLLDLKG--QPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSM 286
Query: 297 G-SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQE--RSK 353
G SFG QI+EIA GL+ SGVRFLWS + + + P GF E +
Sbjct: 287 GVSFGPSQIREIALGLKHSGVRFLWS---------------NSAEKKVFPEGFLEWMELE 331
Query: 354 GRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVR 413
G+GMICGWAPQ EVLAH AIGGFVSHCGWNSILES+WFGVPI+TWPIYAEQQ+NAF++V+
Sbjct: 332 GKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVK 391
Query: 414 DLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSS 473
+ G+ + LR+DYR+G++ V A+E+ + + +MD DS V K+V+E+ E +R A+ DGGSS
Sbjct: 392 EWGVGLGLRVDYRKGSDV-VAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSS 450
Query: 474 YAATGRLIEDLFGS 487
+ G+LI+D+ GS
Sbjct: 451 LISVGKLIDDITGS 464
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/493 (46%), Positives = 312/493 (63%), Gaps = 42/493 (8%)
Query: 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDN 60
+ + +EL+FIP+P +GHL S + FAK L D++ ITV ++ +D
Sbjct: 6 INKNSELIFIPAPGIGHLASALEFAKLLTNHDKN--------LYITVFCIKFPGMPFAD- 56
Query: 61 DAHIKSLAGAGATADVSIRFIGVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHV 120
++IKS+ + I+ I +P++ PPP + KSPE +I +++S +K A I+ +
Sbjct: 57 -SYIKSVLASQP----QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVK-ATIKTI 110
Query: 121 LNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGFVLHLPTRXXXXXXXXXX 180
L+N K+ GLVLDFFC SMID NE G+PSY+F TS FL +L L R
Sbjct: 111 LSN--KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSD 168
Query: 181 XXXXIFTY---ANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAV 237
+ +N VP VLP CFNK GG+ A+ RF++TKGIIVNTF +LE ++
Sbjct: 169 RDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSI 228
Query: 238 EYLMKCD-GVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSM 296
+ L D +PP+Y VGP++DL G P+ Q D I++WLD+QP SVVFLCFGSM
Sbjct: 229 DALYDHDEKIPPIYAVGPLLDLKG--QPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSM 286
Query: 297 G-SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQE--RSK 353
G SFG QI+EIA GL+ SGVRFLWS + + + P GF E +
Sbjct: 287 GVSFGPSQIREIALGLKHSGVRFLWS---------------NSAEKKVFPEGFLEWMELE 331
Query: 354 GRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVR 413
G+GMICGWAPQ EVLAH AIGGFVSHCGWNSILES+WFGVPI+TWPIYAEQQ+NAF++V+
Sbjct: 332 GKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVK 391
Query: 414 DLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSS 473
+ G+ + LR+DYR+G++ V A+E+ + + +MD DS V K+V+E+ E +R A+ DGGSS
Sbjct: 392 EWGVGLGLRVDYRKGSDV-VAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSS 450
Query: 474 YAATGRLIEDLFG 486
+ G+LI+D+ G
Sbjct: 451 LISVGKLIDDITG 463
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 242/478 (50%), Gaps = 35/478 (7%)
Query: 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKS 66
+ IPSP +GHL+ ++ FAKRL+ L + ++T ++ E + + + S
Sbjct: 9 VAIIPSPGMGHLIPLVEFAKRLVHL---------HGLTVTFVIAGEGPPSKAQRTV-LDS 58
Query: 67 LAGAGATADVSIRFIGVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVK 126
L SI + +P ++ L E I+ V +++ V +
Sbjct: 59 LPS-------SISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLP 111
Query: 127 IAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGFVLHLPTRXXXXXXXXXXXXXXIF 186
A LV+D F + D A E VP Y+F+ + A L F LHLP +
Sbjct: 112 TA-LVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLM 170
Query: 187 TYAN-PVPYR-VLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAVEYLMKCD 244
PV + L K + + +R+KE +GI+VNTF ELE +A++ L +
Sbjct: 171 LPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPG 230
Query: 245 -GVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQ 303
PPVY VGP++++ + T+ E ++WLD+QP SV+++ FGS G+ EQ
Sbjct: 231 LDKPPVYPVGPLVNI-----GKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQ 285
Query: 304 IQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDI--LPRGFQERSKGRGMICG- 360
+ E+A GL S RFLW +R ++ + + LP GF ER+K RG +
Sbjct: 286 LNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPF 345
Query: 361 WAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVE 420
WAPQ +VLAH + GGF++HCGWNS LESV G+P++ WP+YAEQ++NA + D+ A
Sbjct: 346 WAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAA-- 403
Query: 421 LRLDYRRGTENHVMADELARAVGCVMDGD--SEVRKRVKEVSEKARLALRDGGSSYAA 476
L R G + V +E+AR V +M+G+ VR ++KE+ E A L+D G+S A
Sbjct: 404 --LRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKA 459
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 169/380 (44%), Gaps = 41/380 (10%)
Query: 127 IAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGFVLHLPTRXXX----XXXXXXXXX 182
+ LV D S I A E +P+ ++F+S A L V+H +
Sbjct: 119 VTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTN 178
Query: 183 XXIFTYANPVP----YRVLPSLCFNKHGG-----FSAFENFGRRFKETKGIIVNTFEELE 233
+ T + +P +R+ + F + F R + I++NTF ELE
Sbjct: 179 GCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELE 238
Query: 234 SHAVEYLMKCDGVPPVYNVGPMIDL---HGDIH---ARPRGGGTQRDEIIRWLDDQPASS 287
S + L +P +Y +GP+ L IH + + E + WL+ + S
Sbjct: 239 SDVINALSS--TIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGS 296
Query: 288 VVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRG 347
VV++ FGS EQ+ E A GL FLW +R P I
Sbjct: 297 VVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIR----------PDLVIGGSVIFSSE 346
Query: 348 FQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQIN 407
F RG+I W PQ +VL H +IGGF++HCGWNS ES+ GVP++ WP +A+Q +
Sbjct: 347 FTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTD 406
Query: 408 AFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD--SEVRKRVKEVSEKARL 465
+ + + +E+ + +R +ELA+ + V+ GD +++++ E+ +KA
Sbjct: 407 CRFICNEWEIGMEIDTNVKR--------EELAKLINEVIAGDKGKKMKQKAMELKKKAEE 458
Query: 466 ALRDGGSSYAATGRLIEDLF 485
R GG SY ++I+D+
Sbjct: 459 NTRPGGCSYMNLNKVIKDVL 478
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 186/386 (48%), Gaps = 38/386 (9%)
Query: 97 PEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTS 156
P++ I + + + ++ ++ V ++ LV D F D A E+GV F+T+
Sbjct: 83 PQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTA 142
Query: 157 GAAFLGFVLHL-PTRXXXXXXXXXXXXXXIFTY---ANPVPYRVLPS-LCF-NKHGGFS- 209
G L +++ R + + + V +R L + F N + FS
Sbjct: 143 GPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSR 202
Query: 210 AFENFGRRFKETKGIIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGG 269
G+ + + +N+FEEL+ L + N+GP +L P
Sbjct: 203 MLHRMGQVLPKATAVFINSFEELDDSLTNDLKS--KLKTYLNIGPF-NLITPPPVVPNTT 259
Query: 270 GTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKD 329
G ++WL ++ +SVV++ FG++ + ++ ++ LE S V F+WSLR K
Sbjct: 260 GC-----LQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRD---KA 311
Query: 330 RPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESV 389
R LP GF E+++G GM+ WAPQ EVLAH A+G FV+HCGWNS+ ESV
Sbjct: 312 RVH-----------LPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESV 360
Query: 390 WFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMA--DELARAVGCVMD 447
GVP++ P + +Q++N +MV D+ L + +R++ T++ +M+ D++ +
Sbjct: 361 AGGVPLICRPFFGDQRLNG-RMVEDV-LEIGVRIEGGVFTKSGLMSCFDQILS-----QE 413
Query: 448 GDSEVRKRVKEVSEKARLALRDGGSS 473
++R+ ++ + E A A+ GSS
Sbjct: 414 KGKKLRENLRALRETADRAVGPKGSS 439
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 112/209 (53%), Gaps = 25/209 (11%)
Query: 277 IRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGE 336
+ WLD SSVV++ FGS+ + ++ +A LE+ G F+WS R P
Sbjct: 264 LEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP---------- 313
Query: 337 YTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIV 396
++ LP+GF ER+K +G I WAPQ E+L HS++G F++H GWNS+LE + GVP++
Sbjct: 314 ----KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMI 369
Query: 397 TWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADE-LARAVGCVMDGDSE--VR 453
+ P + +Q +N + E L+ G +N V+ E + +A+ M + +R
Sbjct: 370 SRPFFGDQGLNT--------ILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMR 421
Query: 454 KRVKEVSEKARLALRDGGSSYAATGRLIE 482
+++ ++ E A A+ G+S LI+
Sbjct: 422 QKIVKLKESAFKAVEQNGTSAMDFTTLIQ 450
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 288 VVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRG 347
VVF + + EE+ IAS L + + LW P D L G
Sbjct: 24 VVFSLGSXVSNXTEERANVIASALAQIPQKVLWRFDGNKP--------------DTL--G 67
Query: 348 FQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQIN 407
R + W PQ ++L H F++H G N I E+++ G+P V P++A+Q N
Sbjct: 68 LNTR------LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQPDN 121
Query: 408 AFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVS 460
+ G AV R+D+ N + +L A+ V++ D ++ V ++S
Sbjct: 122 -IAHXKARGAAV--RVDF-----NTXSSTDLLNALKRVIN-DPSYKENVXKLS 165
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 361 WAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVE 420
W PQ ++L ++ F++H G S +E++ VP+V P AEQ +NA ++V +LGL
Sbjct: 312 WVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIV-ELGLG-- 366
Query: 421 LRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEK 462
R + V A++L AV V D V +R+ V ++
Sbjct: 367 -----RHIPRDQVTAEKLREAVLAVA-SDPGVAERLAAVRQE 402
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 361 WAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVE 420
W P VLAH+ ++H ++LE+ GVP+V P +A + + + V +LGL
Sbjct: 288 WIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSV 345
Query: 421 LRLD 424
LR D
Sbjct: 346 LRPD 349
>pdb|3IAA|A Chain A, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp Bound Form
pdb|3IAA|B Chain B, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp Bound Form
Length = 416
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 361 WAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVE 420
W P +VL + + V+H G ++ E++++G P+V P + Q A + V LGL
Sbjct: 304 WVPHVKVLEQATV--CVTHGGXGTLXEALYWGRPLVVVPQSFDVQPXA-RRVDQLGLGAV 360
Query: 421 L 421
L
Sbjct: 361 L 361
>pdb|3RSC|A Chain A, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp And Calicheamicin T0 Bound Form
pdb|3RSC|B Chain B, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp And Calicheamicin T0 Bound Form
Length = 415
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 361 WAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVE 420
W P +VL + + V+H G ++ E++++G P+V P + Q A + V LGL
Sbjct: 304 WVPHVKVLEQATV--CVTHGGXGTLXEALYWGRPLVVVPQSFDVQPXA-RRVDQLGLGAV 360
Query: 421 L 421
L
Sbjct: 361 L 361
>pdb|2P67|A Chain A, Crystal Structure Of LaoAO TRANSPORT SYSTEM KINASE
Length = 341
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 4 KAELVFI-PSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDA 62
+AE FI P PS GHL A+ L+LL AAG + TV V Q T A D
Sbjct: 115 RAEAAFIRPVPSSGHLGGASQRARELMLL--CEAAGYDVVIVETVGVGQSETEVARMVDC 172
Query: 63 HIK-SLAGAG 71
I +AG G
Sbjct: 173 FISLQIAGGG 182
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,614,127
Number of Sequences: 62578
Number of extensions: 623616
Number of successful extensions: 1273
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1228
Number of HSP's gapped (non-prelim): 20
length of query: 489
length of database: 14,973,337
effective HSP length: 103
effective length of query: 386
effective length of database: 8,527,803
effective search space: 3291731958
effective search space used: 3291731958
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)