Query 011311
Match_columns 489
No_of_seqs 200 out of 1615
Neff 9.5
Searched_HMMs 46136
Date Thu Mar 28 23:56:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011311.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011311hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02207 UDP-glycosyltransfera 100.0 4E-71 8.6E-76 556.9 48.6 457 1-487 1-466 (468)
2 PLN02554 UDP-glycosyltransfera 100.0 9.3E-71 2E-75 562.7 47.3 463 4-488 2-480 (481)
3 PLN02410 UDP-glucoronosyl/UDP- 100.0 1.2E-70 2.5E-75 554.1 46.4 436 4-486 7-450 (451)
4 PLN02167 UDP-glycosyltransfera 100.0 2.5E-69 5.4E-74 551.3 48.8 461 3-488 2-474 (475)
5 PLN02555 limonoid glucosyltran 100.0 3.1E-69 6.6E-74 545.7 47.9 451 4-488 7-471 (480)
6 PLN02173 UDP-glucosyl transfer 100.0 4.1E-69 9E-74 540.3 47.4 429 3-485 4-447 (449)
7 PLN02992 coniferyl-alcohol glu 100.0 4.4E-69 9.4E-74 543.0 46.7 444 3-486 4-469 (481)
8 PLN00164 glucosyltransferase; 100.0 1.2E-68 2.5E-73 545.2 48.4 456 4-488 3-475 (480)
9 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.3E-68 2.8E-73 543.0 47.4 447 3-486 8-471 (477)
10 PLN02152 indole-3-acetate beta 100.0 8.8E-69 1.9E-73 538.8 45.2 442 4-485 3-455 (455)
11 PLN02562 UDP-glycosyltransfera 100.0 1.4E-68 2.9E-73 540.8 46.2 433 1-485 3-448 (448)
12 PLN03015 UDP-glucosyl transfer 100.0 3.1E-68 6.8E-73 533.7 45.3 446 4-485 3-467 (470)
13 PLN02534 UDP-glycosyltransfera 100.0 8.7E-68 1.9E-72 535.7 48.1 461 1-489 5-489 (491)
14 PLN03004 UDP-glycosyltransfera 100.0 1.9E-67 4.2E-72 528.6 43.9 441 3-475 2-450 (451)
15 PLN02210 UDP-glucosyl transfer 100.0 6.9E-67 1.5E-71 528.9 45.2 434 3-485 7-454 (456)
16 PLN02208 glycosyltransferase f 100.0 2.3E-66 5E-71 521.7 47.1 427 1-487 1-440 (442)
17 PLN02670 transferase, transfer 100.0 1.2E-66 2.6E-71 525.0 44.8 446 3-488 5-467 (472)
18 PLN02764 glycosyltransferase f 100.0 4E-66 8.7E-71 517.0 46.3 427 4-488 5-447 (453)
19 PLN00414 glycosyltransferase f 100.0 7.8E-66 1.7E-70 518.4 46.8 426 1-487 1-441 (446)
20 PLN02448 UDP-glycosyltransfera 100.0 6.3E-66 1.4E-70 525.3 45.4 436 3-487 9-458 (459)
21 PLN03007 UDP-glucosyltransfera 100.0 3.8E-65 8.2E-70 522.1 47.2 452 3-487 4-481 (482)
22 PHA03392 egt ecdysteroid UDP-g 100.0 1.1E-45 2.3E-50 379.1 30.5 389 6-466 22-449 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 4E-46 8.6E-51 388.4 11.9 385 6-467 2-427 (500)
24 TIGR01426 MGT glycosyltransfer 100.0 2.6E-41 5.6E-46 341.4 33.4 361 10-466 1-376 (392)
25 KOG1192 UDP-glucuronosyl and U 100.0 3.7E-42 8E-47 358.6 20.4 397 4-465 5-438 (496)
26 cd03784 GT1_Gtf_like This fami 100.0 4.1E-41 8.8E-46 341.3 25.6 367 7-466 3-388 (401)
27 COG1819 Glycosyl transferases, 100.0 1.7E-37 3.7E-42 310.3 23.0 383 6-486 3-400 (406)
28 PRK12446 undecaprenyldiphospho 99.9 2.6E-24 5.7E-29 212.6 28.0 325 1-458 1-335 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.9 8.6E-21 1.9E-25 185.4 30.2 322 7-465 3-337 (357)
30 PF13528 Glyco_trans_1_3: Glyc 99.9 3.1E-20 6.8E-25 182.4 26.6 304 7-445 3-317 (318)
31 TIGR00661 MJ1255 conserved hyp 99.8 4.3E-19 9.4E-24 174.1 23.6 85 354-452 229-317 (321)
32 PRK00726 murG undecaprenyldiph 99.8 1.6E-15 3.4E-20 151.5 30.7 115 356-485 237-356 (357)
33 cd03785 GT1_MurG MurG is an N- 99.7 4E-15 8.6E-20 148.1 26.8 321 7-455 2-330 (350)
34 TIGR00215 lpxB lipid-A-disacch 99.7 6.4E-15 1.4E-19 147.8 22.9 106 364-481 261-383 (385)
35 TIGR01133 murG undecaprenyldip 99.6 6.8E-13 1.5E-17 131.9 28.5 82 363-455 243-327 (348)
36 PRK00025 lpxB lipid-A-disaccha 99.6 1E-12 2.2E-17 132.4 24.1 109 365-486 256-377 (380)
37 PRK13609 diacylglycerol glucos 99.5 3E-12 6.5E-17 129.0 26.2 167 285-485 201-370 (380)
38 TIGR03590 PseG pseudaminic aci 99.5 5.1E-12 1.1E-16 121.1 21.4 103 287-410 171-278 (279)
39 PF04101 Glyco_tran_28_C: Glyc 99.5 5.4E-15 1.2E-19 130.8 0.5 137 288-450 1-145 (167)
40 PRK13608 diacylglycerol glucos 99.4 2.2E-10 4.8E-15 115.6 30.8 166 284-484 200-369 (391)
41 COG4671 Predicted glycosyl tra 99.4 1.1E-10 2.5E-15 109.3 23.7 332 5-447 10-364 (400)
42 TIGR03492 conserved hypothetic 99.4 2.9E-10 6.3E-15 114.3 28.6 172 285-482 204-394 (396)
43 PLN02605 monogalactosyldiacylg 99.4 1.2E-09 2.7E-14 110.0 32.7 113 354-484 265-379 (382)
44 PF03033 Glyco_transf_28: Glyc 99.1 5.9E-11 1.3E-15 101.5 6.1 124 7-158 1-132 (139)
45 cd03814 GT1_like_2 This family 99.0 1.3E-06 2.9E-11 86.6 32.4 157 287-483 197-362 (364)
46 cd03823 GT1_ExpE7_like This fa 98.9 2.8E-06 6.1E-11 83.9 29.5 84 353-453 242-333 (359)
47 cd03800 GT1_Sucrose_synthase T 98.9 1E-05 2.2E-10 81.7 32.8 83 354-453 283-372 (398)
48 cd03794 GT1_wbuB_like This fam 98.8 5E-06 1.1E-10 82.9 27.5 139 286-455 219-371 (394)
49 PLN02871 UDP-sulfoquinovose:DA 98.8 2.7E-05 5.8E-10 80.7 33.0 130 288-453 264-404 (465)
50 cd03818 GT1_ExpC_like This fam 98.8 5.4E-05 1.2E-09 76.7 33.9 85 354-453 281-370 (396)
51 PRK05749 3-deoxy-D-manno-octul 98.8 2.5E-05 5.4E-10 79.9 31.6 101 365-483 314-420 (425)
52 COG3980 spsG Spore coat polysa 98.8 2.5E-06 5.5E-11 78.2 20.9 143 287-458 159-302 (318)
53 cd04962 GT1_like_5 This family 98.7 4.2E-05 9.1E-10 76.4 32.1 83 354-453 253-340 (371)
54 cd03817 GT1_UGDG_like This fam 98.7 8.1E-05 1.8E-09 73.7 31.4 80 353-450 258-344 (374)
55 PRK10307 putative glycosyl tra 98.7 0.00028 6E-09 71.9 35.6 114 354-485 284-406 (412)
56 cd03808 GT1_cap1E_like This fa 98.7 8.1E-05 1.8E-09 73.1 30.9 84 354-454 246-334 (359)
57 cd03801 GT1_YqgM_like This fam 98.6 0.00012 2.6E-09 72.0 31.5 85 353-454 255-346 (374)
58 TIGR03449 mycothiol_MshA UDP-N 98.6 0.00038 8.3E-09 70.6 35.6 85 354-455 283-374 (405)
59 cd03820 GT1_amsD_like This fam 98.6 0.00013 2.9E-09 71.2 31.0 90 354-460 235-330 (348)
60 cd03825 GT1_wcfI_like This fam 98.6 0.00011 2.4E-09 73.0 29.9 111 354-484 244-362 (365)
61 TIGR00236 wecB UDP-N-acetylglu 98.6 9.7E-06 2.1E-10 81.2 21.4 106 354-482 255-363 (365)
62 cd03816 GT1_ALG1_like This fam 98.5 0.00048 1E-08 70.2 33.3 76 355-448 295-381 (415)
63 cd03786 GT1_UDP-GlcNAc_2-Epime 98.5 4.2E-06 9.1E-11 83.6 17.8 137 285-453 197-341 (363)
64 cd03798 GT1_wlbH_like This fam 98.5 0.00062 1.3E-08 67.2 32.8 82 353-451 258-346 (377)
65 cd03795 GT1_like_4 This family 98.5 0.00029 6.3E-09 69.8 29.5 136 287-452 191-335 (357)
66 PRK01021 lpxB lipid-A-disaccha 98.5 0.00021 4.6E-09 73.9 28.5 208 245-487 379-606 (608)
67 KOG3349 Predicted glycosyltran 98.5 1.1E-06 2.3E-11 72.6 9.1 114 287-419 4-130 (170)
68 TIGR02472 sucr_P_syn_N sucrose 98.4 0.001 2.2E-08 68.4 32.8 110 353-482 316-436 (439)
69 cd03807 GT1_WbnK_like This fam 98.4 0.0015 3.3E-08 64.2 31.8 78 354-450 251-333 (365)
70 cd03821 GT1_Bme6_like This fam 98.4 0.00096 2.1E-08 65.9 30.4 84 353-455 261-351 (375)
71 cd03805 GT1_ALG2_like This fam 98.4 0.00083 1.8E-08 67.7 30.2 80 353-450 279-365 (392)
72 cd03799 GT1_amsK_like This is 98.4 0.00091 2E-08 66.1 29.4 81 353-450 235-328 (355)
73 cd03819 GT1_WavL_like This fam 98.3 0.0021 4.5E-08 63.6 30.7 144 286-453 184-335 (355)
74 PF04007 DUF354: Protein of un 98.3 0.0018 4E-08 63.2 28.5 137 274-447 168-309 (335)
75 cd03822 GT1_ecORF704_like This 98.3 0.0025 5.5E-08 63.0 30.4 81 354-452 247-337 (366)
76 TIGR02468 sucrsPsyn_pln sucros 98.3 0.0024 5.2E-08 70.5 31.5 87 354-455 548-643 (1050)
77 PRK14089 ipid-A-disaccharide s 98.2 0.00012 2.7E-09 71.9 19.4 104 364-478 229-342 (347)
78 PRK09922 UDP-D-galactose:(gluc 98.1 0.0012 2.7E-08 65.8 24.6 131 287-448 180-324 (359)
79 cd05844 GT1_like_7 Glycosyltra 98.1 0.00079 1.7E-08 67.1 23.3 83 353-452 244-339 (367)
80 cd03796 GT1_PIG-A_like This fa 98.1 0.0067 1.5E-07 61.5 29.9 76 354-447 250-332 (398)
81 cd03802 GT1_AviGT4_like This f 98.1 0.0026 5.6E-08 62.4 26.3 126 289-447 173-307 (335)
82 PF02684 LpxB: Lipid-A-disacch 98.1 0.0016 3.5E-08 64.4 24.2 200 247-475 153-366 (373)
83 cd03812 GT1_CapH_like This fam 98.1 0.0074 1.6E-07 59.7 29.3 84 354-455 249-337 (358)
84 cd04951 GT1_WbdM_like This fam 98.0 0.0093 2E-07 59.0 28.9 87 354-458 245-336 (360)
85 cd04955 GT1_like_6 This family 98.0 0.02 4.3E-07 56.7 30.9 106 353-482 247-360 (363)
86 COG1519 KdtA 3-deoxy-D-manno-o 98.0 0.016 3.4E-07 57.2 28.2 85 355-453 301-390 (419)
87 cd03811 GT1_WabH_like This fam 98.0 0.0045 9.8E-08 60.3 25.5 84 354-454 246-337 (353)
88 TIGR03568 NeuC_NnaA UDP-N-acet 98.0 0.0019 4E-08 64.6 22.3 157 286-478 201-363 (365)
89 TIGR02470 sucr_synth sucrose s 97.8 0.076 1.6E-06 57.6 34.7 77 354-446 619-707 (784)
90 cd03809 GT1_mtfB_like This fam 97.7 0.016 3.5E-07 57.1 24.1 90 353-461 252-348 (365)
91 TIGR02149 glgA_Coryne glycogen 97.7 0.069 1.5E-06 53.6 33.1 82 360-452 267-355 (388)
92 TIGR03088 stp2 sugar transfera 97.7 0.073 1.6E-06 53.2 33.4 82 354-452 255-341 (374)
93 cd04946 GT1_AmsK_like This fam 97.7 0.0016 3.5E-08 66.2 16.3 111 354-481 289-406 (407)
94 PLN02275 transferase, transfer 97.7 0.08 1.7E-06 53.1 30.4 75 354-446 286-371 (371)
95 PLN00142 sucrose synthase 97.6 0.14 3E-06 55.8 30.5 78 361-455 653-742 (815)
96 cd03804 GT1_wbaZ_like This fam 97.6 0.00044 9.5E-09 68.7 10.5 134 289-457 197-335 (351)
97 PRK15179 Vi polysaccharide bio 97.5 0.2 4.3E-06 54.1 33.9 93 353-459 573-673 (694)
98 PRK15427 colanic acid biosynth 97.5 0.0054 1.2E-07 62.3 17.3 114 353-485 278-404 (406)
99 PF00534 Glycos_transf_1: Glyc 97.5 0.0014 3E-08 57.7 11.5 87 353-456 72-165 (172)
100 COG5017 Uncharacterized conser 97.5 0.0029 6.3E-08 51.7 11.6 107 289-422 2-122 (161)
101 PF13844 Glyco_transf_41: Glyc 97.4 0.0012 2.5E-08 66.9 11.3 154 284-466 282-444 (468)
102 cd04949 GT1_gtfA_like This fam 97.4 0.04 8.6E-07 55.1 22.6 92 354-459 261-359 (372)
103 COG0763 LpxB Lipid A disacchar 97.4 0.046 9.9E-07 53.4 21.4 202 249-484 158-379 (381)
104 PRK15484 lipopolysaccharide 1, 97.4 0.0088 1.9E-07 60.2 17.7 112 353-484 256-375 (380)
105 PRK00654 glgA glycogen synthas 97.4 0.086 1.9E-06 54.6 24.6 70 366-447 352-427 (466)
106 PLN02949 transferase, transfer 97.3 0.26 5.7E-06 50.9 29.2 82 353-450 334-424 (463)
107 cd03806 GT1_ALG11_like This fa 97.2 0.17 3.7E-06 51.6 24.1 83 353-453 304-397 (419)
108 PF13692 Glyco_trans_1_4: Glyc 97.1 0.0018 4E-08 54.4 7.4 79 353-447 52-134 (135)
109 PF02350 Epimerase_2: UDP-N-ac 97.1 0.0047 1E-07 61.1 11.1 158 284-479 178-344 (346)
110 TIGR03087 stp1 sugar transfera 96.9 0.031 6.7E-07 56.6 15.9 107 354-482 280-392 (397)
111 cd03792 GT1_Trehalose_phosphor 96.9 0.54 1.2E-05 47.0 30.6 109 354-484 252-369 (372)
112 COG0381 WecB UDP-N-acetylgluco 96.8 0.44 9.6E-06 46.8 21.4 108 355-485 263-373 (383)
113 PRK09814 beta-1,6-galactofuran 96.6 0.0086 1.9E-07 59.1 8.5 108 354-482 207-331 (333)
114 cd03813 GT1_like_3 This family 96.5 0.13 2.9E-06 53.3 17.5 86 354-455 354-448 (475)
115 TIGR02918 accessory Sec system 96.5 0.077 1.7E-06 55.3 15.1 99 354-461 376-482 (500)
116 PHA01633 putative glycosyl tra 96.2 0.16 3.6E-06 49.7 14.6 97 354-462 201-323 (335)
117 PRK10017 colanic acid biosynth 95.9 0.34 7.4E-06 49.3 15.8 100 366-485 323-423 (426)
118 COG3914 Spy Predicted O-linked 95.9 0.12 2.6E-06 52.9 12.2 137 284-443 427-573 (620)
119 cd04950 GT1_like_1 Glycosyltra 95.8 0.29 6.4E-06 49.0 15.2 76 354-447 254-339 (373)
120 KOG4626 O-linked N-acetylgluco 95.7 0.11 2.5E-06 53.3 11.0 127 284-421 756-887 (966)
121 PRK15490 Vi polysaccharide bio 95.0 5.5 0.00012 41.8 31.9 63 354-423 455-522 (578)
122 PRK14098 glycogen synthase; Pr 95.0 0.41 9E-06 49.8 13.2 133 287-446 307-449 (489)
123 TIGR02095 glgA glycogen/starch 94.7 0.84 1.8E-05 47.4 14.7 136 287-447 291-436 (473)
124 PHA01630 putative group 1 glyc 94.2 1.1 2.3E-05 44.2 13.3 110 361-484 197-328 (331)
125 cd03791 GT1_Glycogen_synthase_ 94.1 0.64 1.4E-05 48.2 12.3 136 287-447 296-441 (476)
126 PF13524 Glyco_trans_1_2: Glyc 93.7 0.99 2.1E-05 34.8 9.9 82 379-481 9-91 (92)
127 PF06722 DUF1205: Protein of u 93.0 0.13 2.8E-06 40.4 3.7 53 273-325 27-84 (97)
128 COG4370 Uncharacterized protei 92.3 1 2.3E-05 42.5 9.2 107 360-482 301-409 (412)
129 PRK10125 putative glycosyl tra 91.2 3.6 7.7E-05 41.8 12.8 61 365-442 301-365 (405)
130 PLN02501 digalactosyldiacylgly 90.2 3.4 7.5E-05 44.3 11.6 74 356-448 603-681 (794)
131 TIGR02400 trehalose_OtsA alpha 90.2 2.8 6.2E-05 43.2 11.1 102 360-485 342-455 (456)
132 PLN02846 digalactosyldiacylgly 90.0 5.7 0.00012 40.9 13.0 72 358-448 288-363 (462)
133 PF06258 Mito_fiss_Elm1: Mitoc 89.9 6.3 0.00014 38.3 12.6 39 363-402 221-259 (311)
134 cd03788 GT1_TPS Trehalose-6-Ph 88.8 1.5 3.4E-05 45.2 8.0 102 359-484 346-459 (460)
135 PLN02316 synthase/transferase 88.6 16 0.00035 41.4 15.9 103 354-470 900-1017(1036)
136 PLN02939 transferase, transfer 88.5 13 0.00029 41.5 14.9 83 354-447 837-930 (977)
137 PF13579 Glyco_trans_4_4: Glyc 87.6 1.6 3.5E-05 36.9 6.2 96 20-154 6-103 (160)
138 cd01635 Glycosyltransferase_GT 86.8 3.3 7.1E-05 37.3 8.2 49 354-404 161-217 (229)
139 TIGR03713 acc_sec_asp1 accesso 82.1 5.1 0.00011 42.0 8.0 75 354-450 409-489 (519)
140 PF04464 Glyphos_transf: CDP-G 81.4 1.2 2.6E-05 44.5 3.0 116 354-481 252-368 (369)
141 PLN03063 alpha,alpha-trehalose 81.1 6.2 0.00013 43.8 8.5 98 366-486 371-477 (797)
142 PF12000 Glyco_trans_4_3: Gkyc 80.2 32 0.0007 30.1 11.0 41 114-155 55-96 (171)
143 PF13477 Glyco_trans_4_2: Glyc 79.6 33 0.00072 28.2 11.6 100 7-153 2-105 (139)
144 cd03793 GT1_Glycogen_synthase_ 79.5 14 0.0003 39.0 9.8 81 363-447 467-551 (590)
145 COG0438 RfaG Glycosyltransfera 76.8 68 0.0015 30.3 15.7 80 354-450 257-343 (381)
146 cd03789 GT1_LPS_heptosyltransf 76.2 12 0.00027 35.5 8.1 37 7-51 2-38 (279)
147 PRK14099 glycogen synthase; Pr 75.8 37 0.00079 35.4 12.0 83 358-453 355-451 (485)
148 PRK02261 methylaspartate mutas 75.7 8.1 0.00018 32.5 5.9 61 1-84 1-61 (137)
149 TIGR02193 heptsyl_trn_I lipopo 74.6 13 0.00028 36.1 8.0 143 278-446 171-319 (319)
150 TIGR02919 accessory Sec system 71.4 12 0.00025 38.4 6.9 86 354-456 328-419 (438)
151 TIGR02201 heptsyl_trn_III lipo 66.6 47 0.001 32.6 10.0 106 277-398 171-285 (344)
152 PF08660 Alg14: Oligosaccharid 65.9 63 0.0014 28.3 9.5 31 125-155 91-129 (170)
153 PF05159 Capsule_synth: Capsul 64.8 40 0.00086 31.9 8.7 43 355-400 184-226 (269)
154 cd02067 B12-binding B12 bindin 62.9 76 0.0016 25.6 9.0 35 7-51 2-36 (119)
155 PF01975 SurE: Survival protei 62.7 50 0.0011 29.7 8.4 35 7-52 3-37 (196)
156 PF00731 AIRC: AIR carboxylase 60.7 77 0.0017 27.1 8.6 140 288-466 2-149 (150)
157 TIGR02195 heptsyl_trn_II lipop 58.4 81 0.0018 30.8 10.0 96 285-398 173-276 (334)
158 PRK14501 putative bifunctional 58.3 24 0.00053 38.8 6.8 109 358-486 346-462 (726)
159 cd07025 Peptidase_S66 LD-Carbo 57.1 30 0.00065 33.1 6.4 76 298-402 45-122 (282)
160 PRK10422 lipopolysaccharide co 56.4 1.1E+02 0.0023 30.3 10.5 97 286-398 183-287 (352)
161 COG1817 Uncharacterized protei 55.9 2E+02 0.0044 27.9 22.9 110 9-156 4-113 (346)
162 PF01075 Glyco_transf_9: Glyco 55.0 12 0.00026 34.8 3.2 98 285-398 104-208 (247)
163 COG0801 FolK 7,8-dihydro-6-hyd 54.9 23 0.00051 30.5 4.6 29 288-316 3-31 (160)
164 PF10083 DUF2321: Uncharacteri 54.4 29 0.00062 29.5 4.9 72 398-484 78-149 (158)
165 COG0496 SurE Predicted acid ph 53.2 29 0.00064 32.4 5.3 96 21-154 16-124 (252)
166 PRK10964 ADP-heptose:LPS hepto 52.9 76 0.0016 30.8 8.7 136 287-447 179-321 (322)
167 PRK02797 4-alpha-L-fucosyltran 52.0 1.9E+02 0.0041 28.1 10.5 81 354-446 206-292 (322)
168 COG1618 Predicted nucleotide k 49.8 55 0.0012 28.4 5.9 28 5-34 6-33 (179)
169 PRK10916 ADP-heptose:LPS hepto 49.2 1.2E+02 0.0025 29.9 9.5 96 285-398 179-286 (348)
170 PF10093 DUF2331: Uncharacteri 48.9 2.9E+02 0.0062 27.6 18.2 87 298-397 191-287 (374)
171 cd07062 Peptidase_S66_mccF_lik 48.5 43 0.00094 32.5 6.0 76 298-402 49-126 (308)
172 cd01840 SGNH_hydrolase_yrhL_li 48.5 59 0.0013 27.5 6.3 38 285-323 50-87 (150)
173 PF13439 Glyco_transf_4: Glyco 47.5 1.7E+02 0.0037 24.5 10.2 28 14-51 11-38 (177)
174 KOG0853 Glycosyltransferase [C 43.9 56 0.0012 33.8 6.1 69 379-461 377-445 (495)
175 PLN03064 alpha,alpha-trehalose 43.5 3.1E+02 0.0066 31.2 12.2 103 361-486 447-561 (934)
176 PLN02859 glutamine-tRNA ligase 43.1 35 0.00076 37.4 4.7 61 412-484 110-178 (788)
177 TIGR00725 conserved hypothetic 42.9 2.1E+02 0.0045 24.7 8.8 100 272-400 19-123 (159)
178 PF05693 Glycogen_syn: Glycoge 42.8 59 0.0013 34.4 6.2 92 362-463 461-566 (633)
179 PRK06718 precorrin-2 dehydroge 42.4 2.6E+02 0.0056 25.2 9.8 160 286-482 11-181 (202)
180 TIGR02370 pyl_corrinoid methyl 41.9 62 0.0013 29.1 5.6 105 4-150 84-189 (197)
181 COG2327 WcaK Polysaccharide py 41.6 1.1E+02 0.0024 30.6 7.6 77 365-455 280-357 (385)
182 PF02016 Peptidase_S66: LD-car 40.2 61 0.0013 31.0 5.6 74 299-401 46-121 (284)
183 PF07429 Glyco_transf_56: 4-al 40.0 3E+02 0.0065 27.2 10.0 82 354-447 245-332 (360)
184 TIGR01470 cysG_Nterm siroheme 39.9 2.4E+02 0.0052 25.4 9.1 147 286-466 10-165 (205)
185 PF06506 PrpR_N: Propionate ca 39.0 43 0.00094 29.4 4.1 31 369-402 33-63 (176)
186 cd07038 TPP_PYR_PDC_IPDC_like 39.0 57 0.0012 28.2 4.8 28 373-400 60-93 (162)
187 COG2159 Predicted metal-depend 38.9 1.5E+02 0.0033 28.4 8.1 70 249-325 98-167 (293)
188 COG2086 FixA Electron transfer 37.0 2.1E+02 0.0045 27.0 8.3 30 125-154 110-145 (260)
189 cd07039 TPP_PYR_POX Pyrimidine 36.3 1.6E+02 0.0035 25.4 7.2 27 374-400 65-97 (164)
190 PF05225 HTH_psq: helix-turn-h 36.3 51 0.0011 21.6 3.0 26 434-459 1-26 (45)
191 TIGR02398 gluc_glyc_Psyn gluco 35.9 5.3E+02 0.011 26.9 16.2 108 357-487 365-483 (487)
192 cd02070 corrinoid_protein_B12- 34.9 93 0.002 28.0 5.6 107 4-152 82-189 (201)
193 PRK02155 ppnK NAD(+)/NADH kina 34.8 87 0.0019 30.1 5.7 55 367-447 60-118 (291)
194 PF06925 MGDG_synth: Monogalac 34.6 1.3E+02 0.0028 26.1 6.3 24 17-48 1-25 (169)
195 COG0299 PurN Folate-dependent 33.2 1E+02 0.0022 27.6 5.2 73 300-401 63-137 (200)
196 PRK14092 2-amino-4-hydroxy-6-h 33.1 82 0.0018 27.4 4.7 32 284-315 5-36 (163)
197 PRK04539 ppnK inorganic polyph 33.1 1.4E+02 0.003 28.8 6.7 56 367-448 65-124 (296)
198 PLN02470 acetolactate synthase 32.4 1.1E+02 0.0024 32.7 6.6 28 372-399 76-109 (585)
199 COG3340 PepE Peptidase E [Amin 32.2 4E+02 0.0086 24.4 9.1 48 273-321 21-68 (224)
200 PF00289 CPSase_L_chain: Carba 31.4 1E+02 0.0023 24.7 4.7 73 300-390 10-90 (110)
201 PF08766 DEK_C: DEK C terminal 31.0 1.7E+02 0.0038 19.8 5.5 50 434-483 1-51 (54)
202 PLN02929 NADH kinase 30.7 80 0.0017 30.5 4.6 65 370-448 64-137 (301)
203 PF02826 2-Hacid_dh_C: D-isome 30.5 1.3E+02 0.0028 26.3 5.8 106 286-444 37-143 (178)
204 PRK03372 ppnK inorganic polyph 29.9 1.3E+02 0.0028 29.2 5.9 56 367-448 69-128 (306)
205 PRK10353 3-methyl-adenine DNA 29.5 1.8E+02 0.004 25.9 6.3 84 397-481 22-120 (187)
206 COG3660 Predicted nucleoside-d 29.5 5E+02 0.011 24.7 10.1 37 360-398 234-271 (329)
207 PRK06321 replicative DNA helic 29.3 3.4E+02 0.0074 28.2 9.3 38 6-53 228-266 (472)
208 PRK01911 ppnK inorganic polyph 29.2 1.3E+02 0.0028 29.0 5.8 57 366-448 60-120 (292)
209 PRK03359 putative electron tra 29.1 1.1E+02 0.0024 28.8 5.2 31 126-156 112-148 (256)
210 TIGR01162 purE phosphoribosyla 28.9 1.9E+02 0.0042 24.9 6.1 19 449-467 130-148 (156)
211 PRK06932 glycerate dehydrogena 28.7 2.9E+02 0.0062 26.9 8.2 62 286-384 148-209 (314)
212 PRK14077 pnk inorganic polypho 28.7 1.3E+02 0.0028 28.9 5.7 33 366-400 60-96 (287)
213 PF00282 Pyridoxal_deC: Pyrido 28.5 1.6E+02 0.0034 29.5 6.5 70 373-447 104-190 (373)
214 cd02069 methionine_synthase_B1 28.0 1.4E+02 0.0029 27.3 5.5 49 4-68 88-136 (213)
215 cd02071 MM_CoA_mut_B12_BD meth 28.0 3.3E+02 0.0071 22.1 9.8 36 6-51 1-36 (122)
216 cd01452 VWA_26S_proteasome_sub 27.6 2.9E+02 0.0063 24.6 7.3 65 7-86 111-175 (187)
217 PF12146 Hydrolase_4: Putative 27.3 99 0.0022 23.0 3.7 28 5-34 16-43 (79)
218 KOG2941 Beta-1,4-mannosyltrans 27.2 6.3E+02 0.014 25.1 10.9 62 2-86 10-71 (444)
219 PRK12342 hypothetical protein; 27.0 1.2E+02 0.0026 28.6 5.0 30 126-155 109-144 (254)
220 COG1737 RpiR Transcriptional r 26.9 3.1E+02 0.0068 26.1 8.1 92 275-406 122-218 (281)
221 PRK01231 ppnK inorganic polyph 26.5 1.4E+02 0.0031 28.7 5.6 54 369-448 61-118 (295)
222 COG2185 Sbm Methylmalonyl-CoA 26.4 96 0.0021 26.2 3.8 39 3-51 11-49 (143)
223 COG2230 Cfa Cyclopropane fatty 26.2 44 0.00095 31.9 2.0 40 379-418 80-121 (283)
224 PRK11253 ldcA L,D-carboxypepti 26.2 2.1E+02 0.0046 27.7 6.8 73 298-400 48-128 (305)
225 PF07801 DUF1647: Protein of u 25.9 2.1E+02 0.0046 24.2 5.8 64 4-86 59-122 (142)
226 PF04413 Glycos_transf_N: 3-De 25.8 3.7E+02 0.008 23.8 7.8 36 7-50 23-58 (186)
227 PRK07710 acetolactate synthase 24.9 3.4E+02 0.0074 28.9 8.7 27 373-399 79-111 (571)
228 KOG1250 Threonine/serine dehyd 24.8 2.6E+02 0.0055 28.1 6.8 65 370-450 242-317 (457)
229 KOG2941 Beta-1,4-mannosyltrans 24.6 7E+02 0.015 24.8 11.2 145 284-459 252-423 (444)
230 PF02441 Flavoprotein: Flavopr 24.3 76 0.0016 26.1 2.9 35 6-51 2-36 (129)
231 cd07037 TPP_PYR_MenD Pyrimidin 24.3 70 0.0015 27.7 2.8 29 370-400 60-94 (162)
232 PF02350 Epimerase_2: UDP-N-ac 24.2 1.3E+02 0.0028 29.7 5.0 28 126-153 67-97 (346)
233 PRK03378 ppnK inorganic polyph 24.1 1.6E+02 0.0035 28.3 5.4 56 367-448 60-119 (292)
234 TIGR01761 thiaz-red thiazoliny 24.0 7.1E+02 0.015 24.6 10.7 62 360-421 52-120 (343)
235 cd01141 TroA_d Periplasmic bin 23.6 1.2E+02 0.0026 26.5 4.3 35 116-153 62-98 (186)
236 PRK02649 ppnK inorganic polyph 23.5 1.7E+02 0.0038 28.3 5.6 56 367-448 65-124 (305)
237 PF00982 Glyco_transf_20: Glyc 23.4 2.6E+02 0.0055 29.1 7.1 99 366-486 368-474 (474)
238 PRK04940 hypothetical protein; 23.3 2.3E+02 0.0051 25.0 5.8 31 126-156 60-91 (180)
239 PRK08673 3-deoxy-7-phosphohept 23.0 4.5E+02 0.0098 25.9 8.3 21 305-325 190-210 (335)
240 PRK09165 replicative DNA helic 22.8 3.4E+02 0.0074 28.4 8.0 38 6-53 219-271 (497)
241 cd07035 TPP_PYR_POX_like Pyrim 22.7 2.8E+02 0.0061 23.3 6.3 28 371-400 60-93 (155)
242 COG0859 RfaF ADP-heptose:LPS h 22.7 7.2E+02 0.016 24.2 20.8 95 286-398 175-276 (334)
243 PF06825 HSBP1: Heat shock fac 22.5 1E+02 0.0023 21.2 2.7 49 436-487 2-50 (54)
244 PRK13010 purU formyltetrahydro 22.4 4.5E+02 0.0097 25.3 8.1 101 306-445 160-262 (289)
245 PRK14075 pnk inorganic polypho 22.3 2E+02 0.0043 27.1 5.6 52 370-447 41-93 (256)
246 PRK07773 replicative DNA helic 22.3 3.8E+02 0.0083 30.4 8.7 38 6-53 219-257 (886)
247 TIGR03087 stp1 sugar transfera 22.2 3.5E+02 0.0076 26.9 7.9 30 11-51 9-39 (397)
248 TIGR00730 conserved hypothetic 22.2 5.4E+02 0.012 22.6 8.5 117 273-414 21-151 (178)
249 PF02951 GSH-S_N: Prokaryotic 22.0 1.2E+02 0.0026 24.7 3.6 35 7-51 3-40 (119)
250 COG0299 PurN Folate-dependent 21.8 2.4E+02 0.0051 25.3 5.5 30 125-154 28-57 (200)
251 PRK08322 acetolactate synthase 21.8 4.3E+02 0.0092 27.9 8.7 27 373-399 64-96 (547)
252 PF04127 DFP: DNA / pantothena 21.7 63 0.0014 28.7 2.0 37 5-51 4-52 (185)
253 TIGR01498 folK 2-amino-4-hydro 21.5 92 0.002 25.8 2.8 30 289-318 1-30 (127)
254 PLN02935 Bifunctional NADH kin 21.1 1.8E+02 0.0038 30.3 5.2 54 369-448 261-318 (508)
255 cd03412 CbiK_N Anaerobic cobal 21.1 1.6E+02 0.0035 24.2 4.2 37 287-323 2-40 (127)
256 PRK02645 ppnK inorganic polyph 20.8 2.8E+02 0.0062 26.8 6.5 29 370-400 57-89 (305)
257 PRK10916 ADP-heptose:LPS hepto 20.8 1.3E+02 0.0028 29.6 4.3 39 1-51 1-39 (348)
258 PRK05986 cob(I)alamin adenolsy 20.6 6.2E+02 0.013 22.6 11.9 36 4-49 22-57 (191)
259 PRK05282 (alpha)-aspartyl dipe 20.6 6.8E+02 0.015 23.1 9.2 45 275-321 23-67 (233)
260 PF02310 B12-binding: B12 bind 20.6 1.7E+02 0.0037 23.3 4.3 36 6-51 2-37 (121)
261 PRK08305 spoVFB dipicolinate s 20.4 1.4E+02 0.003 26.8 3.9 39 3-51 4-42 (196)
262 COG1484 DnaC DNA replication p 20.4 1.8E+02 0.0039 27.3 4.9 37 5-51 106-142 (254)
263 PF13833 EF-hand_8: EF-hand do 20.3 62 0.0013 21.7 1.3 51 431-486 3-53 (54)
264 PRK07525 sulfoacetaldehyde ace 20.1 8.7E+02 0.019 25.9 10.7 27 373-399 69-101 (588)
265 TIGR02990 ectoine_eutA ectoine 20.1 3.9E+02 0.0083 24.9 6.9 47 18-84 105-152 (239)
No 1
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=4e-71 Score=556.88 Aligned_cols=457 Identities=46% Similarity=0.857 Sum_probs=345.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|+ |+||+++|+|++||++||+.||+.| +.+| -.++|||++++.+ ..+..+...+.+. ...++++|
T Consensus 1 ~~-~~hvv~~P~p~qGHi~P~l~lA~~L--a~~g------g~~~vT~~~t~~~--~~~~~~~~~~~~~----~~~~~i~~ 65 (468)
T PLN02207 1 MR-NAELIFIPTPTVGHLVPFLEFARRL--IEQD------DRIRITILLMKLQ--GQSHLDTYVKSIA----SSQPFVRF 65 (468)
T ss_pred CC-CcEEEEeCCcchhhHHHHHHHHHHH--HhCC------CCeEEEEEEcCCC--cchhhHHhhhhcc----CCCCCeEE
Confidence 55 6899999999999999999999999 8775 2267999998743 1111112222221 11236999
Q ss_pred EEcCCCCC-CCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcC---CCCeeEEEeCCCCchHHHHHHHhCCCeEEEech
Q 011311 81 IGVPKMNP-PPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNN---NVKIAGLVLDFFCSSMIDTANELGVPSYVFFTS 156 (489)
Q Consensus 81 ~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~ 156 (489)
..+|+... +......+...++..+.....+.+++.+.+++++. ..+++|||+|.++.|+..+|+++|||+++|+++
T Consensus 66 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~ 145 (468)
T PLN02207 66 IDVPELEEKPTLGGTQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTT 145 (468)
T ss_pred EEeCCCCCCCccccccCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECc
Confidence 99996431 11111123443444444455455556666665421 124599999999999999999999999999999
Q ss_pred hHHHHHHHhhccccCCCC--c--ccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHh
Q 011311 157 GAAFLGFVLHLPTRGGEE--F--EESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEEL 232 (489)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l 232 (489)
+++.++.+.+.+...... . ...+ .+..+||++.+++..++|.++..... +..+.+.....++.+++++||+++|
T Consensus 146 ~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vPgl~~~l~~~dlp~~~~~~~~-~~~~~~~~~~~~~~~~vlvNtf~~L 223 (468)
T PLN02207 146 NSGFLAMMQYLADRHSKDTSVFVRNSE-EMLSIPGFVNPVPANVLPSALFVEDG-YDAYVKLAILFTKANGILVNSSFDI 223 (468)
T ss_pred cHHHHHHHHHhhhccccccccCcCCCC-CeEECCCCCCCCChHHCcchhcCCcc-HHHHHHHHHhcccCCEEEEEchHHH
Confidence 998888777664332111 1 1111 22568998446888999876643322 4455666667788899999999999
Q ss_pred hHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHh
Q 011311 233 ESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLE 312 (489)
Q Consensus 233 ~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~ 312 (489)
|..+...+...+..|+++.|||++....... +......+++|.+|||++++++||||||||+..++.+++++++.+|+
T Consensus 224 E~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~--~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~ 301 (468)
T PLN02207 224 EPYSVNHFLDEQNYPSVYAVGPIFDLKAQPH--PEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLE 301 (468)
T ss_pred hHHHHHHHHhccCCCcEEEecCCcccccCCC--CccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHH
Confidence 9998888854124578999999986432100 00001123689999999988899999999999999999999999999
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhC
Q 011311 313 KSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFG 392 (489)
Q Consensus 313 ~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~G 392 (489)
.++++|||+++.... ...+.+|++|.++.++|+++++|+||.+||+|++++||||||||||++||+++|
T Consensus 302 ~~~~~flW~~r~~~~-----------~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~G 370 (468)
T PLN02207 302 LCQYRFLWSLRTEEV-----------TNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFG 370 (468)
T ss_pred HCCCcEEEEEeCCCc-----------cccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcC
Confidence 999999999985310 012358999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHhcCC
Q 011311 393 VPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDG-DSEVRKRVKEVSEKARLALRDGG 471 (489)
Q Consensus 393 vP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~-~~~~~~~a~~l~~~~~~~~~~~g 471 (489)
||||+||+++||+.||+++++.+|+|+.+..++..+.++.+++++|+++|+++|++ +++||+||+++++++++++.+||
T Consensus 371 VP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GG 450 (468)
T PLN02207 371 VPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGG 450 (468)
T ss_pred CCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999988878999988532211112357999999999999962 46999999999999999999999
Q ss_pred ChHHHHHHHHHHHhhC
Q 011311 472 SSYAATGRLIEDLFGS 487 (489)
Q Consensus 472 ~~~~~~~~~~~~~~~~ 487 (489)
||+.++++||++++.-
T Consensus 451 SS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 451 SSFAAIEKFIHDVIGI 466 (468)
T ss_pred cHHHHHHHHHHHHHhc
Confidence 9999999999999753
No 2
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.3e-71 Score=562.70 Aligned_cols=463 Identities=48% Similarity=0.872 Sum_probs=346.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCc--chHHHhhhhccCCCCCCCeEEE
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASD--NDAHIKSLAGAGATADVSIRFI 81 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~f~ 81 (489)
|.||+++|+|++||++||+.||+.| +.+| ++++|||++++.. +... ...+.+++. ....++++|+
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~L--a~~G------~~~~vT~v~t~~~--~~~~~~~~~~~~~~~---~~~~~~i~~~ 68 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLL--VDSD------DRLSITVIIIPSR--SGDDASSSAYIASLS---ASSEDRLRYE 68 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHH--HhCC------CCEEEEEEeCCCc--cchhhhhhhhhhhcc---cCCCCCeEEE
Confidence 4899999999999999999999999 8887 5578999998743 1100 011122221 0112369999
Q ss_pred EcCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhc----CCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechh
Q 011311 82 GVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLN----NNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSG 157 (489)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~ 157 (489)
.+|++.++... .. . +..+...+.+.+++.|++++.. ...+++|||+|.++.|+.++|+++|||++.|++++
T Consensus 69 ~lp~~~~~~~~---~~-~-~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~s 143 (481)
T PLN02554 69 VISAGDQPTTE---DP-T-FQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSN 143 (481)
T ss_pred EcCCCCCCccc---ch-H-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCc
Confidence 99976532211 11 2 2234445556677777766542 11235899999999999999999999999999999
Q ss_pred HHHHHHHhhccccCCCC-c--cc-CcC-CcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHh
Q 011311 158 AAFLGFVLHLPTRGGEE-F--EE-SEA-DSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEEL 232 (489)
Q Consensus 158 ~~~~~~~~~~~~~~~~~-~--~~-~~~-~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l 232 (489)
++.++.+.+.+...+.. + .+ ++. .+..+|+++.+++..++|..+... .+...+.+..+...+++|+++||+.+|
T Consensus 144 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~~-~~~~~~~~~~~~~~~~~gvlvNt~~eL 222 (481)
T PLN02554 144 ATFLGLQLHVQMLYDEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLLSK-EWLPLFLAQARRFREMKGILVNTVAEL 222 (481)
T ss_pred HHHHHHHHhhhhhccccccCccccCCCCceeECCCCCCCCCHHHCCCcccCH-HHHHHHHHHHHhcccCCEEEEechHHH
Confidence 99998888765432210 1 11 111 114589885567878888765432 224556666777888999999999999
Q ss_pred hHHHHHHHhhc-CCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHH
Q 011311 233 ESHAVEYLMKC-DGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGL 311 (489)
Q Consensus 233 ~~~~~~~~~~~-~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al 311 (489)
|..+...+.+. ...|++++|||++....... . .....+++|.+|||++++++||||||||+..++.+++.+++.+|
T Consensus 223 e~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~--~-~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l 299 (481)
T PLN02554 223 EPQALKFFSGSSGDLPPVYPVGPVLHLENSGD--D-SKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIAL 299 (481)
T ss_pred hHHHHHHHHhcccCCCCEEEeCCCcccccccc--c-cccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHH
Confidence 99999988752 13478999999953222100 0 01234578999999998889999999999999999999999999
Q ss_pred hhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHh
Q 011311 312 EKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWF 391 (489)
Q Consensus 312 ~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~ 391 (489)
+.+|++|||+++..........++........+|++|.++.++|+++++|+||.+||+|+++++|||||||||++||+++
T Consensus 300 ~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~ 379 (481)
T PLN02554 300 ERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWF 379 (481)
T ss_pred HHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHc
Confidence 99999999999863110000000000111234689999999999999999999999999999999999999999999999
Q ss_pred CCcEEeccCcchhhHHHHHHHHhhCeEEEeeecccc----CCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q 011311 392 GVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRR----GTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLAL 467 (489)
Q Consensus 392 GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~----~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~ 467 (489)
|||||+||+++||+.||+++++.+|+|+.+...+.. +.++.+++++|+++|+++|+++++||+||+++++++++++
T Consensus 380 GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av 459 (481)
T PLN02554 380 GVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVAL 459 (481)
T ss_pred CCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999997767778999998631100 0113689999999999999646899999999999999999
Q ss_pred hcCCChHHHHHHHHHHHhhCC
Q 011311 468 RDGGSSYAATGRLIEDLFGSV 488 (489)
Q Consensus 468 ~~~g~~~~~~~~~~~~~~~~~ 488 (489)
.+||||++++++||+++++|-
T Consensus 460 ~~gGss~~~l~~lv~~~~~~~ 480 (481)
T PLN02554 460 MDGGSSHTALKKFIQDVTKNI 480 (481)
T ss_pred cCCChHHHHHHHHHHHHHhhC
Confidence 999999999999999999985
No 3
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.2e-70 Score=554.14 Aligned_cols=436 Identities=27% Similarity=0.434 Sum_probs=334.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV 83 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l 83 (489)
++||+++|+|++||++||+.||+.| +.+| +.|||++++.+ . .+.. ....+++|..+
T Consensus 7 ~~HVvlvPfpaqGHi~P~l~LAk~L--a~~G--------~~VT~v~T~~n--~-------~~~~-----~~~~~i~~~~i 62 (451)
T PLN02410 7 RRRVVLVPVPAQGHISPMMQLAKTL--HLKG--------FSITIAQTKFN--Y-------FSPS-----DDFTDFQFVTI 62 (451)
T ss_pred CCEEEEECCCccccHHHHHHHHHHH--HcCC--------CEEEEEeCccc--c-------cccc-----cCCCCeEEEeC
Confidence 5799999999999999999999999 9999 88999998743 1 1100 11236999999
Q ss_pred CCCCCCC-CCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHHH
Q 011311 84 PKMNPPP-LDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLG 162 (489)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 162 (489)
|++.|++ .+.. ....++..+...+...+++.|+++..+...+++|||+|+++.|+.++|+++|||++.|++++++.++
T Consensus 63 p~glp~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~ 141 (451)
T PLN02410 63 PESLPESDFKNL-GPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFV 141 (451)
T ss_pred CCCCCccccccc-CHHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHH
Confidence 9876553 2221 2334444444455566667776654322346799999999999999999999999999999998877
Q ss_pred HHhhccccCCCC----cccC-cCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHhhHHHH
Q 011311 163 FVLHLPTRGGEE----FEES-EADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAV 237 (489)
Q Consensus 163 ~~~~~~~~~~~~----~~~~-~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~ 237 (489)
.+.++..+.... .... +.....+|+++ +++..+++............+.......++++|+++|||++||+.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~ 220 (451)
T PLN02410 142 CRSVFDKLYANNVLAPLKEPKGQQNELVPEFH-PLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSL 220 (451)
T ss_pred HHHHHHHHHhccCCCCccccccCccccCCCCC-CCChHHCcchhcCCcHHHHHHHHHHhhcccCCEEEEeChHHhhHHHH
Confidence 666543221110 1110 11113578875 57777777543221111111112222346788999999999999999
Q ss_pred HHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCe
Q 011311 238 EYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVR 317 (489)
Q Consensus 238 ~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~ 317 (489)
.++.. ...+++++|||++....... .....+.+|.+|||++++++||||||||+..++.+++.+++.+|+.++.+
T Consensus 221 ~~l~~-~~~~~v~~vGpl~~~~~~~~----~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~ 295 (451)
T PLN02410 221 SRLQQ-QLQIPVYPIGPLHLVASAPT----SLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQ 295 (451)
T ss_pred HHHHh-ccCCCEEEecccccccCCCc----cccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCC
Confidence 99876 23357999999975432100 11123457899999998899999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEe
Q 011311 318 FLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVT 397 (489)
Q Consensus 318 ~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~ 397 (489)
|||+++.....+ .+....+|++|.++.++|+++++|+||.+||+|++++||||||||||++||+++|||||+
T Consensus 296 FlWv~r~~~~~~--------~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~ 367 (451)
T PLN02410 296 FLWVIRPGSVRG--------SEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMIC 367 (451)
T ss_pred eEEEEccCcccc--------cchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEe
Confidence 999998431100 111234899999999999999999999999999999999999999999999999999999
Q ss_pred ccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhcCCChHH
Q 011311 398 WPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD--SEVRKRVKEVSEKARLALRDGGSSYA 475 (489)
Q Consensus 398 ~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~~~~a~~l~~~~~~~~~~~g~~~~ 475 (489)
||+++||+.||+++++.||+|+.+. . .+++++|+++|+++|+++ ++||+||+++++++++++.+||||+.
T Consensus 368 ~P~~~DQ~~na~~~~~~~~~G~~~~-~-------~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~ 439 (451)
T PLN02410 368 KPFSSDQKVNARYLECVWKIGIQVE-G-------DLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHN 439 (451)
T ss_pred ccccccCHHHHHHHHHHhCeeEEeC-C-------cccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 9999999999999998889999986 3 789999999999999733 38999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 011311 476 ATGRLIEDLFG 486 (489)
Q Consensus 476 ~~~~~~~~~~~ 486 (489)
++++||++++.
T Consensus 440 ~l~~fv~~~~~ 450 (451)
T PLN02410 440 SLEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHHHh
Confidence 99999999874
No 4
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.5e-69 Score=551.34 Aligned_cols=461 Identities=50% Similarity=0.904 Sum_probs=341.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCe-EEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEE
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNS-FSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFI 81 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~-~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 81 (489)
+++||+++|+|++||++||+.||+.| +.+| .. +.||++++..+ ..+....+.+... ...++++|+
T Consensus 2 ~~~hVv~~PfpaqGHi~P~l~LAk~L--a~~G------~~~t~vt~~~t~~~--~~~~~~~~~~~~~----~~~~~i~~~ 67 (475)
T PLN02167 2 KEAELIFVPFPSTGHILVTIEFAKRL--INLD------RRIHTITILYWSLP--FAPQADAFLKSLI----ASEPRIRLV 67 (475)
T ss_pred CccEEEEeCChhhhhHHHHHHHHHHH--HhCC------CCeEEEEEEECCCC--cchhhhHHHhhcc----cCCCCeEEE
Confidence 48999999999999999999999999 8887 22 13566554422 1111122222221 112469999
Q ss_pred EcCCCC-CCCCCC-CCChHHHHHHHHHHhhHHHHHHHHHHHhc--C-CC-CeeEEEeCCCCchHHHHHHHhCCCeEEEec
Q 011311 82 GVPKMN-PPPLDY-FKSPEKFITEYVDSHKDCIKEAIIEHVLN--N-NV-KIAGLVLDFFCSSMIDTANELGVPSYVFFT 155 (489)
Q Consensus 82 ~l~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~-~~-~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~ 155 (489)
.+|+.. +++.+. .......+..+.....+.+++.|+++..+ . .. +++|||+|.++.|+..+|+++|||+++|++
T Consensus 68 ~lp~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t 147 (475)
T PLN02167 68 TLPEVQDPPPMELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLT 147 (475)
T ss_pred ECCCCCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEEC
Confidence 999764 222121 11222233344445556677777766432 1 12 469999999999999999999999999999
Q ss_pred hhHHHHHHHhhccccCCCC---cccCc-CCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhH
Q 011311 156 SGAAFLGFVLHLPTRGGEE---FEESE-ADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEE 231 (489)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~ 231 (489)
++++.++.+.+.+...... +.... ..+..+||++..++..+++..+..... +..+.+..+..++++++++|||++
T Consensus 148 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~~~-~~~~~~~~~~~~~a~~vlvNTf~e 226 (475)
T PLN02167 148 CNAGFLGMMKYLPERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMKES-YEAWVEIAERFPEAKGILVNSFTE 226 (475)
T ss_pred ccHHHHHHHHHHHHhccccccccccCCCCCeeECCCCCCCCChhhCchhhhCcch-HHHHHHHHHhhcccCEeeeccHHH
Confidence 9998888777654321110 00101 121458888556777888765433222 445566667778889999999999
Q ss_pred hhHHHHHHHhhc-CCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHH
Q 011311 232 LESHAVEYLMKC-DGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASG 310 (489)
Q Consensus 232 l~~~~~~~~~~~-~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a 310 (489)
||+.+..++... ...|++++|||++....... .. .....+.+|.+|||.+++++||||||||+..++.+++.+++.+
T Consensus 227 LE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~-~~-~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~ 304 (475)
T PLN02167 227 LEPNAFDYFSRLPENYPPVYPVGPILSLKDRTS-PN-LDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQA 304 (475)
T ss_pred HHHHHHHHHHhhcccCCeeEEeccccccccccC-CC-CCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHH
Confidence 999999888651 12478999999976432100 00 0012246899999999888999999999998999999999999
Q ss_pred HhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHH
Q 011311 311 LEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVW 390 (489)
Q Consensus 311 l~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~ 390 (489)
|+.+|++|||+++.... ........+|++|.++..+++++++|+||.+||+|+++++|||||||||++||++
T Consensus 305 l~~~~~~flw~~~~~~~--------~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~ 376 (475)
T PLN02167 305 LELVGCRFLWSIRTNPA--------EYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLW 376 (475)
T ss_pred HHhCCCcEEEEEecCcc--------cccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHH
Confidence 99999999999985310 0001123489999999999999999999999999999999999999999999999
Q ss_pred hCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcC
Q 011311 391 FGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDG 470 (489)
Q Consensus 391 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~ 470 (489)
+|||||+||+++||+.||+++++.+|+|+.+...+..+.++.+++++|+++|+++|+++++||+||+++++++++++.+|
T Consensus 377 ~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~g 456 (475)
T PLN02167 377 FGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDG 456 (475)
T ss_pred cCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999988777789999986421001112579999999999999745589999999999999999999
Q ss_pred CChHHHHHHHHHHHhhCC
Q 011311 471 GSSYAATGRLIEDLFGSV 488 (489)
Q Consensus 471 g~~~~~~~~~~~~~~~~~ 488 (489)
|||+.++++||+++++.-
T Consensus 457 GsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 457 GSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred CcHHHHHHHHHHHHHhcC
Confidence 999999999999998754
No 5
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=3.1e-69 Score=545.65 Aligned_cols=451 Identities=25% Similarity=0.410 Sum_probs=339.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhh---hhcc-CCCC-CCCe
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKS---LAGA-GATA-DVSI 78 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~-~~~~ 78 (489)
++||+++|+|++||++||+.||+.| +.+| +.|||++++.. ...+.. +... .... ...+
T Consensus 7 ~~HVv~~PfpaqGHi~Pml~lA~~L--a~~G--------~~vT~v~T~~~-------~~~~~~a~~~~~~~~~~~~~~~i 69 (480)
T PLN02555 7 LVHVMLVSFPGQGHVNPLLRLGKLL--ASKG--------LLVTFVTTESW-------GKKMRQANKIQDGVLKPVGDGFI 69 (480)
T ss_pred CCEEEEECCcccccHHHHHHHHHHH--HhCC--------CeEEEEeccch-------hhhhhccccccccccccCCCCeE
Confidence 6899999999999999999999999 9999 88999998732 111111 1000 0000 1136
Q ss_pred EEEEcCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhH
Q 011311 79 RFIGVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGA 158 (489)
Q Consensus 79 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~ 158 (489)
+|..+|++.|++.+...+...++..+.....+.+++.|..+.. ...+++|||+|.++.|+..+|+++|||.++|+++++
T Consensus 70 ~~~~~pdglp~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a 148 (480)
T PLN02555 70 RFEFFEDGWAEDDPRRQDLDLYLPQLELVGKREIPNLVKRYAE-QGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSC 148 (480)
T ss_pred EEeeCCCCCCCCcccccCHHHHHHHHHHhhhHHHHHHHHHHhc-cCCCceEEEECCcchHHHHHHHHcCCCeEEeecccH
Confidence 7777776655544332333334444433444555555554422 123459999999999999999999999999999999
Q ss_pred HHHHHHhhccccCCCCccc---CcCCcccccCCCCCCCCCCCCcccccCCC---chHHHHHHHHhhhccceEEecchhHh
Q 011311 159 AFLGFVLHLPTRGGEEFEE---SEADSADIFTYANPVPYRVLPSLCFNKHG---GFSAFENFGRRFKETKGIIVNTFEEL 232 (489)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gi~~~s~~~l 232 (489)
+.++.+.+.+.... .+.. ++.+ ..+||++ .++..++|.++..... .+..+.+.++...+++|+++|||++|
T Consensus 149 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~iPglp-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eL 225 (480)
T PLN02555 149 ACFSAYYHYYHGLV-PFPTETEPEID-VQLPCMP-LLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQEL 225 (480)
T ss_pred HHHHHHHHHhhcCC-CcccccCCCce-eecCCCC-CcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHH
Confidence 88887776532100 0111 1122 5689986 5888888876642111 13445566667778899999999999
Q ss_pred hHHHHHHHhhcCCCCCEEEecccccCCCCC-CCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHH
Q 011311 233 ESHAVEYLMKCDGVPPVYNVGPMIDLHGDI-HARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGL 311 (489)
Q Consensus 233 ~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al 311 (489)
|+.+...+.. ..| ++.|||++...... ..++......+++|.+|||++++++||||||||+..++.+++.+++.+|
T Consensus 226 E~~~~~~l~~--~~~-v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l 302 (480)
T PLN02555 226 EKEIIDYMSK--LCP-IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGV 302 (480)
T ss_pred hHHHHHHHhh--CCC-EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHH
Confidence 9999988865 334 99999997532110 0000000234568999999998889999999999999999999999999
Q ss_pred hhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHh
Q 011311 312 EKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWF 391 (489)
Q Consensus 312 ~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~ 391 (489)
+.++++|||+++...... . .....+|++|.++.++|+++++|+||.+||.|+++++|||||||||++||+++
T Consensus 303 ~~~~~~flW~~~~~~~~~------~--~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~ 374 (480)
T PLN02555 303 LNSGVSFLWVMRPPHKDS------G--VEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSS 374 (480)
T ss_pred HhcCCeEEEEEecCcccc------c--chhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHc
Confidence 999999999998431000 0 00134788998888899999999999999999999999999999999999999
Q ss_pred CCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhc
Q 011311 392 GVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD--SEVRKRVKEVSEKARLALRD 469 (489)
Q Consensus 392 GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~~~~a~~l~~~~~~~~~~ 469 (489)
|||||+||+++||+.||+++++.||+|+.+.... ..++.+++++|+++|+++|+++ +++|+||++++++.++++.+
T Consensus 375 GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~--~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~e 452 (480)
T PLN02555 375 GVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGE--AENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAE 452 (480)
T ss_pred CCCEEeCCCccccHHHHHHHHHHhCceEEccCCc--cccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999995321 0113689999999999999633 48999999999999999999
Q ss_pred CCChHHHHHHHHHHHhhCC
Q 011311 470 GGSSYAATGRLIEDLFGSV 488 (489)
Q Consensus 470 ~g~~~~~~~~~~~~~~~~~ 488 (489)
||||+.++++||+++++++
T Consensus 453 gGSS~~~l~~~v~~i~~~~ 471 (480)
T PLN02555 453 GGSSDRNFQEFVDKLVRKS 471 (480)
T ss_pred CCcHHHHHHHHHHHHHhcc
Confidence 9999999999999998763
No 6
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=4.1e-69 Score=540.34 Aligned_cols=429 Identities=25% Similarity=0.420 Sum_probs=331.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEE
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIG 82 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 82 (489)
+++||+++|+|++||++||++||+.| +.+| ++|||++++.. .+.+.. ....+++|+.
T Consensus 4 ~~~hvv~~P~paqGHi~P~l~lAk~L--a~~G--------~~vT~v~t~~~----------~~~~~~---~~~~~i~~~~ 60 (449)
T PLN02173 4 MRGHVLAVPFPSQGHITPIRQFCKRL--HSKG--------FKTTHTLTTFI----------FNTIHL---DPSSPISIAT 60 (449)
T ss_pred CCcEEEEecCcccccHHHHHHHHHHH--HcCC--------CEEEEEECCch----------hhhccc---CCCCCEEEEE
Confidence 45699999999999999999999999 9999 88999998733 222210 1124699999
Q ss_pred cCCCCCCC-CCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHH
Q 011311 83 VPKMNPPP-LDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFL 161 (489)
Q Consensus 83 l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 161 (489)
+|++.|++ .+...++..++..+.+...+.+++.|.++.. ...+++|||+|.++.|+..+|+++|||++.|++++++.+
T Consensus 61 ipdglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~ 139 (449)
T PLN02173 61 ISDGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQS-TDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVN 139 (449)
T ss_pred cCCCCCCcccccccCHHHHHHHHHHhhhHHHHHHHHHhhc-cCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHH
Confidence 99876653 2333344445554444555566666655432 112349999999999999999999999999999888776
Q ss_pred HHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCC---chHHHHHHHHhhhccceEEecchhHhhHHHHH
Q 011311 162 GFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHG---GFSAFENFGRRFKETKGIIVNTFEELESHAVE 238 (489)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~~ 238 (489)
..+++.. ... .+.. ..+|+++ +++..+++.++..... ....+.+.++...+++++++|||++||+.+..
T Consensus 140 ~~~~~~~-~~~-----~~~~-~~~pg~p-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~ 211 (449)
T PLN02173 140 YINYLSY-INN-----GSLT-LPIKDLP-LLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENE 211 (449)
T ss_pred HHHHhHH-hcc-----CCcc-CCCCCCC-CCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHH
Confidence 5554321 111 1111 4478876 4777888876643221 13445566677788899999999999999988
Q ss_pred HHhhcCCCCCEEEecccccCCC---CC-CCCCCC--CC--CChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHH
Q 011311 239 YLMKCDGVPPVYNVGPMIDLHG---DI-HARPRG--GG--TQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASG 310 (489)
Q Consensus 239 ~~~~~~~~p~~~~vGp~~~~~~---~~-~~~~~~--~~--~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a 310 (489)
.+.. . ++++.|||+++... .. ..++.. .. ..+++|.+|||.+++++||||||||+...+.+++.+++.+
T Consensus 212 ~~~~--~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~g 288 (449)
T PLN02173 212 LLSK--V-CPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASA 288 (449)
T ss_pred HHHh--c-CCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHH
Confidence 8864 2 46999999974211 00 000000 00 2235699999999989999999999999999999999999
Q ss_pred HhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhh-cCCCccccccCHHHHhccCCcceEEecCCchhHHHHH
Q 011311 311 LEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERS-KGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESV 389 (489)
Q Consensus 311 l~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal 389 (489)
| .+.+|||+++... ...+|++|.++. ++|+++++|+||.+||+|+++++|||||||||++||+
T Consensus 289 L--s~~~flWvvr~~~--------------~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai 352 (449)
T PLN02173 289 I--SNFSYLWVVRASE--------------ESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGL 352 (449)
T ss_pred h--cCCCEEEEEeccc--------------hhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHH
Confidence 9 7888999998531 124788888887 5778889999999999999999999999999999999
Q ss_pred HhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHH
Q 011311 390 WFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD--SEVRKRVKEVSEKARLAL 467 (489)
Q Consensus 390 ~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~~~~a~~l~~~~~~~~ 467 (489)
++|||||+||+++||+.||+++++.||+|+.+.... .++.+++|+|+++|+++|+++ +++|+||+++++++++++
T Consensus 353 ~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~---~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av 429 (449)
T PLN02173 353 SLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEK---ESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSL 429 (449)
T ss_pred HcCCCEEecCchhcchHHHHHHHHHhCceEEEeecc---cCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999899999987431 112479999999999999743 489999999999999999
Q ss_pred hcCCChHHHHHHHHHHHh
Q 011311 468 RDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 468 ~~~g~~~~~~~~~~~~~~ 485 (489)
.+||||+.++++||++++
T Consensus 430 ~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 430 SEGGSTDININTFVSKIQ 447 (449)
T ss_pred cCCCcHHHHHHHHHHHhc
Confidence 999999999999999985
No 7
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=4.4e-69 Score=543.04 Aligned_cols=444 Identities=30% Similarity=0.532 Sum_probs=331.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhh-hcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEE
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLL-DRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFI 81 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~-~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 81 (489)
.|+||+++|+|++||++||+.||+.| + ++| ++|||++++.+ .+.+.... ....++++.
T Consensus 4 ~~pHVvl~P~paqGHi~P~l~LAk~L--a~~~g--------~~vT~v~t~~n-------~~~~~~~~----~~~~~i~~~ 62 (481)
T PLN02992 4 TKPHAAMFSSPGMGHVIPVIELGKRL--SANHG--------FHVTVFVLETD-------AASAQSKF----LNSTGVDIV 62 (481)
T ss_pred CCcEEEEeCCcccchHHHHHHHHHHH--HhCCC--------cEEEEEeCCCc-------hhhhhhcc----ccCCCceEE
Confidence 46899999999999999999999999 8 689 88999998733 12221111 112368999
Q ss_pred EcCCCCCCCCC-CCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHH
Q 011311 82 GVPKMNPPPLD-YFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAF 160 (489)
Q Consensus 82 ~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 160 (489)
.+|.....+.. ...+....+..+.....+.+++.+.++ ..+++|||+|.++.|+..+|+++|||+++|++++++.
T Consensus 63 ~lp~p~~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~ 138 (481)
T PLN02992 63 GLPSPDISGLVDPSAHVVTKIGVIMREAVPTLRSKIAEM----HQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARF 138 (481)
T ss_pred ECCCccccCCCCCCccHHHHHHHHHHHhHHHHHHHHHhc----CCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHH
Confidence 99853211110 001122222222333334444444433 2478999999999999999999999999999999988
Q ss_pred HHHHhhccccCCCC-cc--cCcCCcccccCCCCCCCCCCCCcccccCCC-chHHHHHHHHhhhccceEEecchhHhhHHH
Q 011311 161 LGFVLHLPTRGGEE-FE--ESEADSADIFTYANPVPYRVLPSLCFNKHG-GFSAFENFGRRFKETKGIIVNTFEELESHA 236 (489)
Q Consensus 161 ~~~~~~~~~~~~~~-~~--~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~ 236 (489)
++.+.+.+.+.... .. .++.. ..+||++ +++..+++..+..... .+..+.+......+++|+++|||++||+.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~-~~iPg~~-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~ 216 (481)
T PLN02992 139 LGVSIYYPTLDKDIKEEHTVQRKP-LAMPGCE-PVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKS 216 (481)
T ss_pred HHHHHhhhhhccccccccccCCCC-cccCCCC-ccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHH
Confidence 77766554322111 00 01112 5688885 5777788864433221 244556666777788999999999999999
Q ss_pred HHHHhhcC-----CCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHH
Q 011311 237 VEYLMKCD-----GVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGL 311 (489)
Q Consensus 237 ~~~~~~~~-----~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al 311 (489)
...+.... ..++++.|||+++.... ...+.+|.+|||++++++||||||||+..++.+++.+++.+|
T Consensus 217 l~~l~~~~~~~~~~~~~v~~VGPl~~~~~~--------~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL 288 (481)
T PLN02992 217 LKSLQDPKLLGRVARVPVYPIGPLCRPIQS--------SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGL 288 (481)
T ss_pred HHHHhhccccccccCCceEEecCccCCcCC--------CcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHH
Confidence 98886410 12569999999753221 123567999999998889999999999999999999999999
Q ss_pred hhcCCeEEEEecCCCCCC---C-CCCCCC--cccccccCChhhHhhhcCCCccc-cccCHHHHhccCCcceEEecCCchh
Q 011311 312 EKSGVRFLWSLRKTPPKD---R-PEMPGE--YTCVEDILPRGFQERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNS 384 (489)
Q Consensus 312 ~~~~~~~vw~~~~~~~~~---~-~~~~~~--~~~~~~~lp~~~~~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s 384 (489)
+.++++|||+++...... . ...+.+ .+.....+|++|.++..+++.++ +|+||.+||+|+++++|||||||||
T Consensus 289 ~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS 368 (481)
T PLN02992 289 EMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSS 368 (481)
T ss_pred HHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhH
Confidence 999999999997531000 0 000000 01112358999999999888776 9999999999999999999999999
Q ss_pred HHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC--HHHHHHHHHHHHH
Q 011311 385 ILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD--SEVRKRVKEVSEK 462 (489)
Q Consensus 385 ~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~~~~a~~l~~~ 462 (489)
++||+++|||||+||+++||+.||+++++.+|+|+.++.. ++.++.++|+++|+++|.++ +++|+||++++++
T Consensus 369 ~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~-----~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~ 443 (481)
T PLN02992 369 TLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP-----KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDT 443 (481)
T ss_pred HHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC-----CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999997677999999742 12689999999999999732 4899999999999
Q ss_pred HHHHH--hcCCChHHHHHHHHHHHhh
Q 011311 463 ARLAL--RDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 463 ~~~~~--~~~g~~~~~~~~~~~~~~~ 486 (489)
+++++ ++||||++++++||+++++
T Consensus 444 a~~Av~~~~GGSS~~~l~~~v~~~~~ 469 (481)
T PLN02992 444 AEMSLSIDGGGVAHESLCRVTKECQR 469 (481)
T ss_pred HHHHhcCCCCCchHHHHHHHHHHHHH
Confidence 99999 4699999999999999975
No 8
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1.2e-68 Score=545.16 Aligned_cols=456 Identities=44% Similarity=0.788 Sum_probs=340.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCC--eEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEE
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNN--SFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFI 81 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h--~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 81 (489)
|+||+++|+|++||++||+.||+.| +.+| + ++.|||+++..+ ... +...++...........+++|+
T Consensus 3 ~~HVVlvPfpaqGHi~P~l~LAk~L--a~~g------~~~~~~vT~~~t~~~--~~~-~~~~~~~~~~~~~~~~~~i~~~ 71 (480)
T PLN00164 3 APTVVLLPVWGSGHLMSMLEAGKRL--LASS------GGGALSLTVLVMPPP--TPE-SASEVAAHVRREAASGLDIRFH 71 (480)
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHH--HhCC------CCCcEEEEEEEcCCC--ccc-hhHHHHHHHhhcccCCCCEEEE
Confidence 7899999999999999999999999 8774 2 278999998743 111 1112222110000112269999
Q ss_pred EcCCCC-CCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHH
Q 011311 82 GVPKMN-PPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAF 160 (489)
Q Consensus 82 ~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 160 (489)
.+|+.. +++.+ +...++..+.+.+.+.+++.|+.+ ..+++|||+|+++.|+..+|+++|||++.|++++++.
T Consensus 72 ~lp~~~~p~~~e---~~~~~~~~~~~~~~~~l~~~L~~l----~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~ 144 (480)
T PLN00164 72 HLPAVEPPTDAA---GVEEFISRYIQLHAPHVRAAIAGL----SCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAM 144 (480)
T ss_pred ECCCCCCCCccc---cHHHHHHHHHHhhhHHHHHHHHhc----CCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHH
Confidence 999764 22222 223333334444444455444443 2357999999999999999999999999999999998
Q ss_pred HHHHhhccccCCCC---cccCcCCcccccCCCCCCCCCCCCcccccCCC-chHHHHHHHHhhhccceEEecchhHhhHHH
Q 011311 161 LGFVLHLPTRGGEE---FEESEADSADIFTYANPVPYRVLPSLCFNKHG-GFSAFENFGRRFKETKGIIVNTFEELESHA 236 (489)
Q Consensus 161 ~~~~~~~~~~~~~~---~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~ 236 (489)
++.+.+.+...... +.+.... ..+||++ +++..++|..+..... .+..+....+...+++|+++|||++||+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~-~~iPGlp-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~ 222 (480)
T PLN00164 145 LALMLRLPALDEEVAVEFEEMEGA-VDVPGLP-PVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGV 222 (480)
T ss_pred HHHHhhhhhhcccccCcccccCcc-eecCCCC-CCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHH
Confidence 88887764432110 1111111 4588885 5888888876543321 134445556677788999999999999999
Q ss_pred HHHHhhcC-----CCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHH
Q 011311 237 VEYLMKCD-----GVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGL 311 (489)
Q Consensus 237 ~~~~~~~~-----~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al 311 (489)
...+.... ..|+++.|||++...... .....+++|.+|||++++++||||||||+..++.+++.+++.+|
T Consensus 223 ~~~~~~~~~~~~~~~~~v~~vGPl~~~~~~~-----~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL 297 (480)
T PLN00164 223 LAAIADGRCTPGRPAPTVYPIGPVISLAFTP-----PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGL 297 (480)
T ss_pred HHHHHhccccccCCCCceEEeCCCccccccC-----CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHH
Confidence 98886510 125799999997432110 11234678999999998899999999999999999999999999
Q ss_pred hhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-cccCHHHHhccCCcceEEecCCchhHHHHHH
Q 011311 312 EKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILESVW 390 (489)
Q Consensus 312 ~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~ 390 (489)
+.++++|||+++.....+. ..+.+ ......+|++|.++..++++++ +|+||.+||+|+++++|||||||||++||++
T Consensus 298 ~~s~~~flWv~~~~~~~~~-~~~~~-~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~ 375 (480)
T PLN00164 298 ERSGHRFLWVLRGPPAAGS-RHPTD-ADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLW 375 (480)
T ss_pred HHcCCCEEEEEcCCccccc-ccccc-cchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHH
Confidence 9999999999985421100 00000 1122348899999999988888 9999999999999999999999999999999
Q ss_pred hCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHH
Q 011311 391 FGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD----SEVRKRVKEVSEKARLA 466 (489)
Q Consensus 391 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~----~~~~~~a~~l~~~~~~~ 466 (489)
+|||||+||+++||+.||+++++.||+|+.+.... .+++.+++++|+++|+++|.++ +.+|+||++++++++++
T Consensus 376 ~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~--~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a 453 (480)
T PLN00164 376 HGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR--KRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKA 453 (480)
T ss_pred cCCCEEeCCccccchhHHHHHHHHhCeEEEecccc--ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888889999985320 0112579999999999999631 37999999999999999
Q ss_pred HhcCCChHHHHHHHHHHHhhCC
Q 011311 467 LRDGGSSYAATGRLIEDLFGSV 488 (489)
Q Consensus 467 ~~~~g~~~~~~~~~~~~~~~~~ 488 (489)
+.+||||+.++++||++++++.
T Consensus 454 ~~~gGSS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 454 VEEGGSSYAALQRLAREIRHGA 475 (480)
T ss_pred hcCCCcHHHHHHHHHHHHHhcc
Confidence 9999999999999999999764
No 9
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.3e-68 Score=542.96 Aligned_cols=447 Identities=28% Similarity=0.486 Sum_probs=330.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEE
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIG 82 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 82 (489)
.++||+++|+|++||++||+.||+.| +.+| ++|||++++.+ .+.+.... ....++++..
T Consensus 8 ~~~HVvl~PfpaqGHi~P~l~LAk~L--a~~G--------~~VTfv~T~~n-------~~~~~~~~----~~~~~i~~~~ 66 (477)
T PLN02863 8 AGTHVLVFPFPAQGHMIPLLDLTHRL--ALRG--------LTITVLVTPKN-------LPFLNPLL----SKHPSIETLV 66 (477)
T ss_pred CCCEEEEecCcccchHHHHHHHHHHH--HhCC--------CEEEEEeCCCc-------HHHHhhhc----ccCCCeeEEe
Confidence 47899999999999999999999999 9999 88999998743 22233221 1123688877
Q ss_pred cCCC----CCCCCCCCCCh-HHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechh
Q 011311 83 VPKM----NPPPLDYFKSP-EKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSG 157 (489)
Q Consensus 83 l~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~ 157 (489)
+|.. .|++.++..+. ...+..+..... ...+.+.+++++...+++|||+|.++.|+..+|+++|||+++|++++
T Consensus 67 lp~P~~~~lPdG~~~~~~~~~~~~~~~~~a~~-~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~s 145 (477)
T PLN02863 67 LPFPSHPSIPSGVENVKDLPPSGFPLMIHALG-ELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSG 145 (477)
T ss_pred CCCCCcCCCCCCCcChhhcchhhHHHHHHHHH-HhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccC
Confidence 6632 24444433221 121222222222 22333333433223467999999999999999999999999999999
Q ss_pred HHHHHHHhhccccCCCCc--ccCcCC--cccccCCCCCCCCCCCCcccccCCC---chHHHHHHHHhhhccceEEecchh
Q 011311 158 AAFLGFVLHLPTRGGEEF--EESEAD--SADIFTYANPVPYRVLPSLCFNKHG---GFSAFENFGRRFKETKGIIVNTFE 230 (489)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~Pgl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gi~~~s~~ 230 (489)
++.++.+.++........ ...+.. ...+||++ .++..+++.++..... ....+.+..+..+..+|+++|||+
T Consensus 146 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~ 224 (477)
T PLN02863 146 AMALSIMYSLWREMPTKINPDDQNEILSFSKIPNCP-KYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFT 224 (477)
T ss_pred HHHHHHHHHHhhcccccccccccccccccCCCCCCC-CcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHH
Confidence 998888777542111000 010111 02478775 5788888876542211 123334444445567889999999
Q ss_pred HhhHHHHHHHhhcCCC-CCEEEecccccCCCCCC---CCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHH
Q 011311 231 ELESHAVEYLMKCDGV-PPVYNVGPMIDLHGDIH---ARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQE 306 (489)
Q Consensus 231 ~l~~~~~~~~~~~~~~-p~~~~vGp~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~ 306 (489)
+||+.+...+.. ... ++++.|||+++...... .++......+++|.+|||.+++++||||||||+...+.+++.+
T Consensus 225 eLE~~~~~~~~~-~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~e 303 (477)
T PLN02863 225 ELEGIYLEHLKK-ELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEA 303 (477)
T ss_pred HHHHHHHHHHHh-hcCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHH
Confidence 999999999876 222 67999999975331000 0000011135689999999988999999999999999999999
Q ss_pred HHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-cccCHHHHhccCCcceEEecCCchhH
Q 011311 307 IASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSI 385 (489)
Q Consensus 307 ~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~ 385 (489)
++.+|+.+|++|||+++..... ......+|.+|.++..++++++ +|+||.+||+|+++++|||||||||+
T Consensus 304 la~gL~~~~~~flw~~~~~~~~---------~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~ 374 (477)
T PLN02863 304 LASGLEKSGVHFIWCVKEPVNE---------ESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSV 374 (477)
T ss_pred HHHHHHhCCCcEEEEECCCccc---------ccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHH
Confidence 9999999999999999854210 0011348889988887666655 99999999999999999999999999
Q ss_pred HHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011311 386 LESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARL 465 (489)
Q Consensus 386 ~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~ 465 (489)
+||+++|||||+||+++||+.||+++++.||+|+.+... .++.++.+++.++|+++|.++++||+||+++++++++
T Consensus 375 ~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~----~~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~ 450 (477)
T PLN02863 375 LEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEG----ADTVPDSDELARVFMESVSENQVERERAKELRRAALD 450 (477)
T ss_pred HHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccC----CCCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888999998532 1125799999999999995468999999999999999
Q ss_pred HHhcCCChHHHHHHHHHHHhh
Q 011311 466 ALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 466 ~~~~~g~~~~~~~~~~~~~~~ 486 (489)
++.+||||+.++++||+++++
T Consensus 451 Av~~gGSS~~~l~~~v~~i~~ 471 (477)
T PLN02863 451 AIKERGSSVKDLDGFVKHVVE 471 (477)
T ss_pred HhccCCcHHHHHHHHHHHHHH
Confidence 999999999999999999975
No 10
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=8.8e-69 Score=538.85 Aligned_cols=442 Identities=23% Similarity=0.376 Sum_probs=333.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhh-cCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEE
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLD-RDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIG 82 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~-rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 82 (489)
++||+++|+|++||++||++||+.| +. +| ++|||++++.. ..+.+... ....++++|+.
T Consensus 3 ~~hvv~~P~p~qGHi~P~l~La~~L--a~~~G--------~~vT~v~t~~~---------~~~~~~~~-~~~~~~i~~~~ 62 (455)
T PLN02152 3 PPHFLLVTFPAQGHVNPSLRFARRL--IKTTG--------TRVTFATCLSV---------IHRSMIPN-HNNVENLSFLT 62 (455)
T ss_pred CcEEEEecCcccccHHHHHHHHHHH--hhCCC--------cEEEEEeccch---------hhhhhhcc-CCCCCCEEEEE
Confidence 6799999999999999999999999 85 68 88999998721 11211100 01123699999
Q ss_pred cCCCCCCCCCC-CCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHH
Q 011311 83 VPKMNPPPLDY-FKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFL 161 (489)
Q Consensus 83 l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 161 (489)
++++.+.+.+. ..+...++..+.....+.+.+.++++.. ...+++|||+|.++.|+.++|+++|||++.|++++++.+
T Consensus 63 i~dglp~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~ 141 (455)
T PLN02152 63 FSDGFDDGVISNTDDVQNRLVNFERNGDKALSDFIEANLN-GDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVF 141 (455)
T ss_pred cCCCCCCccccccccHHHHHHHHHHhccHHHHHHHHHhhc-cCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHH
Confidence 98766554322 2344444555555555666666666532 123569999999999999999999999999999999888
Q ss_pred HHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCC---chHHHHHHHHhhhc--cceEEecchhHhhHHH
Q 011311 162 GFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHG---GFSAFENFGRRFKE--TKGIIVNTFEELESHA 236 (489)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~gi~~~s~~~l~~~~ 236 (489)
+.+++..... +.. ..+|+++ +++..++|.++..... ....+.+..+.... .+++++|||++||+.+
T Consensus 142 ~~~~~~~~~~-------~~~-~~iPglp-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~ 212 (455)
T PLN02152 142 DIYYNYSTGN-------NSV-FEFPNLP-SLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEF 212 (455)
T ss_pred HHHHHhhccC-------CCe-eecCCCC-CCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHH
Confidence 8776653211 111 4588886 5778888887643211 13344455554433 4699999999999999
Q ss_pred HHHHhhcCCCCCEEEecccccCCCCCCCC-CCC-C-CCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhh
Q 011311 237 VEYLMKCDGVPPVYNVGPMIDLHGDIHAR-PRG-G-GTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEK 313 (489)
Q Consensus 237 ~~~~~~~~~~p~~~~vGp~~~~~~~~~~~-~~~-~-~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~ 313 (489)
...+.. .+++.|||+++.......+ +.. . ...+.++.+|||++++++||||||||+..++.+++.+++.+|+.
T Consensus 213 ~~~l~~----~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~ 288 (455)
T PLN02152 213 LTAIPN----IEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIE 288 (455)
T ss_pred HHhhhc----CCEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHH
Confidence 988854 2699999997532100000 000 0 12345899999999888999999999999999999999999999
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhCC
Q 011311 314 SGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGV 393 (489)
Q Consensus 314 ~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~Gv 393 (489)
++.+|||+++....... ..+.. ......+|++|.++.++|+++++|+||.+||+|++++||||||||||++||+++||
T Consensus 289 s~~~flWv~r~~~~~~~-~~~~~-~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~Gv 366 (455)
T PLN02152 289 GKRPFLWVITDKLNREA-KIEGE-EETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGV 366 (455)
T ss_pred cCCCeEEEEecCccccc-ccccc-cccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCC
Confidence 99999999985321000 00000 00011257899999999999999999999999999999999999999999999999
Q ss_pred cEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHhcCCC
Q 011311 394 PIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD-SEVRKRVKEVSEKARLALRDGGS 472 (489)
Q Consensus 394 P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~a~~l~~~~~~~~~~~g~ 472 (489)
|||+||+++||+.||+++++.||+|+.+... .++.+++|+|+++|+++|+++ .+||+||++++++++++.++|||
T Consensus 367 P~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~----~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggs 442 (455)
T PLN02152 367 PVVAFPMWSDQPANAKLLEEIWKTGVRVREN----SEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGS 442 (455)
T ss_pred CEEeccccccchHHHHHHHHHhCceEEeecC----cCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999988888887532 112579999999999999732 36999999999999999999999
Q ss_pred hHHHHHHHHHHHh
Q 011311 473 SYAATGRLIEDLF 485 (489)
Q Consensus 473 ~~~~~~~~~~~~~ 485 (489)
|+.++++||++++
T Consensus 443 S~~nl~~li~~i~ 455 (455)
T PLN02152 443 SDKNVEAFVKTLC 455 (455)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999875
No 11
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=1.4e-68 Score=540.79 Aligned_cols=433 Identities=22% Similarity=0.367 Sum_probs=329.0
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|..++||+++|+|++||++||++||+.| +.+| ++|||++++.. .+.+.... ....+++|
T Consensus 3 ~~~~~HVVlvPfPaqGHi~PmL~LAk~L--as~G--------~~VT~vtt~~~-------~~~~~~~~----~~~~~i~~ 61 (448)
T PLN02562 3 VTQRPKIILVPYPAQGHVTPMLKLASAF--LSRG--------FEPVVITPEFI-------HRRISATL----DPKLGITF 61 (448)
T ss_pred CCCCcEEEEEcCccccCHHHHHHHHHHH--HhCC--------CEEEEEeCcch-------hhhhhhcc----CCCCCEEE
Confidence 4457899999999999999999999999 9999 78999998732 11122111 11236999
Q ss_pred EEcCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHH
Q 011311 81 IGVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAF 160 (489)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 160 (489)
+.+|++.+.+. ..+...++..+...+.+.+.+.++++.. ..+++|||+|+++.|+.++|+++|||+++|++++++.
T Consensus 62 v~lp~g~~~~~--~~~~~~l~~a~~~~~~~~l~~ll~~l~~--~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~ 137 (448)
T PLN02562 62 MSISDGQDDDP--PRDFFSIENSMENTMPPQLERLLHKLDE--DGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAA 137 (448)
T ss_pred EECCCCCCCCc--cccHHHHHHHHHHhchHHHHHHHHHhcC--CCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHH
Confidence 99987643221 1122222222222344455555554421 1346899999999999999999999999999999887
Q ss_pred HHHHhhccccCCCC-ccc---Cc--CCcccccCCCCCCCCCCCCcccccCC--C-chHHHHHHHHhhhccceEEecchhH
Q 011311 161 LGFVLHLPTRGGEE-FEE---SE--ADSADIFTYANPVPYRVLPSLCFNKH--G-GFSAFENFGRRFKETKGIIVNTFEE 231 (489)
Q Consensus 161 ~~~~~~~~~~~~~~-~~~---~~--~~~~~~Pgl~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~gi~~~s~~~ 231 (489)
++.+.+.+...... +.. +. .+...+|+++ .++..+++.++.... . .+..+.+.++...+++++++|||++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~-~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~e 216 (448)
T PLN02562 138 YRLIQAIPELVRTGLISETGCPRQLEKICVLPEQP-LLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKD 216 (448)
T ss_pred HHHHHHHHHHhhccccccccccccccccccCCCCC-CCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhh
Confidence 77765543222111 111 11 1102578875 577788887654321 1 1455666677777888999999999
Q ss_pred hhHHHHHHHhhc---CCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCc-CCCHHHHHHH
Q 011311 232 LESHAVEYLMKC---DGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMG-SFGEEQIQEI 307 (489)
Q Consensus 232 l~~~~~~~~~~~---~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~ 307 (489)
||......+... +..|+++.|||++...... .+.....+.+.+|.+|||++++++||||||||+. .++.+++.++
T Consensus 217 LE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~-~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l 295 (448)
T PLN02562 217 EEYDDVKNHQASYNNGQNPQILQIGPLHNQEATT-ITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTL 295 (448)
T ss_pred hCHHHHHHHHhhhccccCCCEEEecCcccccccc-cCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHH
Confidence 999887766431 2346799999997643210 0000001234678899999988899999999986 6789999999
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHH
Q 011311 308 ASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILE 387 (489)
Q Consensus 308 ~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~e 387 (489)
+.+|+++|++|||+++.+. ...+|++|.++.++|+++++|+||.+||+|+++++||||||||||+|
T Consensus 296 ~~~l~~~g~~fiW~~~~~~--------------~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~E 361 (448)
T PLN02562 296 ALALEASGRPFIWVLNPVW--------------REGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTME 361 (448)
T ss_pred HHHHHHCCCCEEEEEcCCc--------------hhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHH
Confidence 9999999999999997531 12378899989999999999999999999999999999999999999
Q ss_pred HHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q 011311 388 SVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLAL 467 (489)
Q Consensus 388 al~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~ 467 (489)
|+++|||||+||+++||+.||+++++.+|+|+.+. ++++++|+++|+++|+ +++||+||++++++++++
T Consensus 362 al~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~---------~~~~~~l~~~v~~~l~-~~~~r~~a~~l~~~~~~~- 430 (448)
T PLN02562 362 AIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS---------GFGQKEVEEGLRKVME-DSGMGERLMKLRERAMGE- 430 (448)
T ss_pred HHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC---------CCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhc-
Confidence 99999999999999999999999987789998874 5799999999999998 789999999999999887
Q ss_pred hcCCChHHHHHHHHHHHh
Q 011311 468 RDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 468 ~~~g~~~~~~~~~~~~~~ 485 (489)
++||||++++++||++++
T Consensus 431 ~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 431 EARLRSMMNFTTLKDELK 448 (448)
T ss_pred CCCCCHHHHHHHHHHHhC
Confidence 778999999999999875
No 12
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=3.1e-68 Score=533.67 Aligned_cols=446 Identities=30% Similarity=0.536 Sum_probs=332.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhc-CCCCCCCCeEEEEEEEcCCCCcccCcchHHHhh-hhccCCCCCCCeEEE
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDR-DNAAGSNNSFSITVLVMQEHTATASDNDAHIKS-LAGAGATADVSIRFI 81 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~r-G~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~f~ 81 (489)
++||+++|+|++||++||+.||+.| +.+ | ++|||+++... +.. ..... +. ......+++|.
T Consensus 3 ~pHvvl~P~p~qGHi~P~l~LAk~L--a~~~g--------~~vT~v~t~~~--~~~---~~~~~~~~--~~~~~~~i~~~ 65 (470)
T PLN03015 3 QPHALLVASPGLGHLIPILELGNRL--SSVLN--------IHVTILAVTSG--SSS---PTETEAIH--AAAARTTCQIT 65 (470)
T ss_pred CcEEEEECCcccccHHHHHHHHHHH--HhCCC--------CeEEEEECCCc--hhh---hccccccc--cccCCCceEEE
Confidence 6899999999999999999999999 876 8 88999987743 100 00011 11 00011259999
Q ss_pred EcCCCCCCCCCCC-CChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCC-eEEEechhHH
Q 011311 82 GVPKMNPPPLDYF-KSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVP-SYVFFTSGAA 159 (489)
Q Consensus 82 ~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP-~v~~~~~~~~ 159 (489)
.+|....++.... .+....+..+.....+.+++.|.++ ..+++|||+|.++.|+.++|+++||| .++|++++++
T Consensus 66 ~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l----~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~ 141 (470)
T PLN03015 66 EIPSVDVDNLVEPDATIFTKMVVKMRAMKPAVRDAVKSM----KRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAW 141 (470)
T ss_pred ECCCCccccCCCCCccHHHHHHHHHHhchHHHHHHHHhc----CCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHH
Confidence 9986542221010 1222223333344445555555443 23679999999999999999999999 5888888887
Q ss_pred HHHHHhhccccCCCC---cccCcCCcccccCCCCCCCCCCCCcccccCCCc-hHHHHHHHHhhhccceEEecchhHhhHH
Q 011311 160 FLGFVLHLPTRGGEE---FEESEADSADIFTYANPVPYRVLPSLCFNKHGG-FSAFENFGRRFKETKGIIVNTFEELESH 235 (489)
Q Consensus 160 ~~~~~~~~~~~~~~~---~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gi~~~s~~~l~~~ 235 (489)
..+.+.+.+...... ....+.+ ..+||++ +++..+++..+...... +..+.+..+...+++|+++|||++||+.
T Consensus 142 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~vPg~p-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~ 219 (470)
T PLN03015 142 FLAVMVYLPVLDTVVEGEYVDIKEP-LKIPGCK-PVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGN 219 (470)
T ss_pred HHHHHHhhhhhhcccccccCCCCCe-eeCCCCC-CCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHH
Confidence 776776654322110 0011122 5689986 68888888755433221 3344455566788999999999999999
Q ss_pred HHHHHhhcCC------CCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHH
Q 011311 236 AVEYLMKCDG------VPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIAS 309 (489)
Q Consensus 236 ~~~~~~~~~~------~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~ 309 (489)
+...+.. .. .+++++|||++.... . ...+.+|.+|||++++++||||||||+..++.+++.+++.
T Consensus 220 ~~~~l~~-~~~~~~~~~~~v~~VGPl~~~~~-------~-~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~ 290 (470)
T PLN03015 220 TLAALRE-DMELNRVMKVPVYPIGPIVRTNV-------H-VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAW 290 (470)
T ss_pred HHHHHHh-hcccccccCCceEEecCCCCCcc-------c-ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHH
Confidence 9988865 11 256999999984321 0 1234589999999988999999999999999999999999
Q ss_pred HHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-cccCHHHHhccCCcceEEecCCchhHHHH
Q 011311 310 GLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILES 388 (489)
Q Consensus 310 al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~ea 388 (489)
+|+.++++|||+++.+........ .+.+.....+|++|.++..++++++ +|+||.+||+|++++||||||||||++||
T Consensus 291 gl~~s~~~FlWv~r~~~~~~~~~~-~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Ea 369 (470)
T PLN03015 291 GLELSGQRFVWVLRRPASYLGASS-SDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLES 369 (470)
T ss_pred HHHhCCCcEEEEEecCcccccccc-ccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHH
Confidence 999999999999985321000000 0001123458999999999999776 99999999999999999999999999999
Q ss_pred HHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHH
Q 011311 389 VWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDG----DSEVRKRVKEVSEKAR 464 (489)
Q Consensus 389 l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~----~~~~~~~a~~l~~~~~ 464 (489)
+++|||||+||+++||+.||+++++.||+|+.+... ..++.+++++|+++|+++|++ .+++|+||++++++.+
T Consensus 370 i~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~---~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~ 446 (470)
T PLN03015 370 LTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSEL---PSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSE 446 (470)
T ss_pred HHcCCCEEecccccchHHHHHHHHHHhCeeEEeccc---ccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998889999998521 111368999999999999941 2499999999999999
Q ss_pred HHHhcCCChHHHHHHHHHHHh
Q 011311 465 LALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 465 ~~~~~~g~~~~~~~~~~~~~~ 485 (489)
+++.+||||+.++++|+++++
T Consensus 447 ~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 447 RAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred HHhcCCCcHHHHHHHHHHhcc
Confidence 999999999999999999874
No 13
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=8.7e-68 Score=535.69 Aligned_cols=461 Identities=26% Similarity=0.443 Sum_probs=330.0
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|.++.||+++|+|++||++||+.||+.| +.+| +.|||++++.. ...+.............++|
T Consensus 5 ~~~~~Hvv~vPfpaqGHi~P~l~LAk~L--a~~G--------~~vT~v~t~~n-------~~~~~~~~~~~~~~~~~i~~ 67 (491)
T PLN02534 5 KAKQLHFVLIPLMAQGHMIPMIDMARLL--AERG--------VIVSLVTTPQN-------ASRFAKTIDRARESGLPIRL 67 (491)
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHHHH--HhCC--------CeEEEEECCCc-------HHHHhhhhhhccccCCCeEE
Confidence 4456899999999999999999999999 9999 88999998732 11122211000011124899
Q ss_pred EEcC-----CCCCCCCCCCCCh--HHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEE
Q 011311 81 IGVP-----KMNPPPLDYFKSP--EKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVF 153 (489)
Q Consensus 81 ~~l~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~ 153 (489)
+.+| ++.|++.+...+. ..++..+.... ..+.+.+++++++...+++|||+|.++.|+..+|+++|||+++|
T Consensus 68 ~~lp~p~~~dglp~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F 146 (491)
T PLN02534 68 VQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAV-DKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVF 146 (491)
T ss_pred EEcCCCCccCCCCCCccccccCCcHHHHHHHHHHH-HHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEE
Confidence 9988 3445444432221 12333332222 23444555555432346899999999999999999999999999
Q ss_pred echhHHHHHHHhhccccCCCCcccCcCCcccccCCCC--CCCCCCCCcccccCCCchHHHHHHHHhh-hccceEEecchh
Q 011311 154 FTSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYAN--PVPYRVLPSLCFNKHGGFSAFENFGRRF-KETKGIIVNTFE 230 (489)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gi~~~s~~ 230 (489)
++++++....+.++.......-...+..+..+|+++. .++..+++..+... ..+..+...+... +.++++++|||+
T Consensus 147 ~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~-~~~~~~~~~~~~~~~~a~~vlvNTf~ 225 (491)
T PLN02534 147 HGMCCFSLLSSHNIRLHNAHLSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSL-PDLDDVRNKMREAESTAFGVVVNSFN 225 (491)
T ss_pred ecchHHHHHHHHHHHHhcccccCCCCCceeecCCCCccccccHHHCChhhcCc-ccHHHHHHHHHhhcccCCEEEEecHH
Confidence 9999877765433211111100011112255788763 25666777654322 1134444444432 356799999999
Q ss_pred HhhHHHHHHHhhcCCCCCEEEecccccCCCCCC---CCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHH
Q 011311 231 ELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIH---ARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEI 307 (489)
Q Consensus 231 ~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~ 307 (489)
+||+.+...+.. ...++++.|||++....... .++......+.+|.+|||++++++||||||||+.....+++.++
T Consensus 226 eLE~~~l~~l~~-~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~ 304 (491)
T PLN02534 226 ELEHGCAEAYEK-AIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIEL 304 (491)
T ss_pred HhhHHHHHHHHh-hcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHH
Confidence 999999998875 23357999999975321000 00000011245799999999989999999999999999999999
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCcc-ccccCHHHHhccCCcceEEecCCchhHH
Q 011311 308 ASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMI-CGWAPQKEVLAHSAIGGFVSHCGWNSIL 386 (489)
Q Consensus 308 ~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v-~~w~pq~~iL~~~~~~~~i~HgG~~s~~ 386 (489)
+.+|+.++.+|||+++.+.... +.....+|++|.++..+++.+ .+|+||.+||+|++++||||||||||++
T Consensus 305 a~gl~~~~~~flW~~r~~~~~~--------~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ 376 (491)
T PLN02534 305 GLGLEASKKPFIWVIKTGEKHS--------ELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTI 376 (491)
T ss_pred HHHHHhCCCCEEEEEecCcccc--------chhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHH
Confidence 9999999999999998431000 000123688998886555555 4999999999999999999999999999
Q ss_pred HHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecccc--C--CC-C-ccCHHHHHHHHHHHhc--CC--HHHHHHH
Q 011311 387 ESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRR--G--TE-N-HVMADELARAVGCVMD--GD--SEVRKRV 456 (489)
Q Consensus 387 eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~--~--~~-~-~~~~~~l~~ai~~vl~--~~--~~~~~~a 456 (489)
||+++|||||+||+++||+.||+++++.||+|+.+...... + .+ + .+++|+|+++|+++|. ++ +++|+||
T Consensus 377 ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA 456 (491)
T PLN02534 377 EGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRA 456 (491)
T ss_pred HHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHH
Confidence 99999999999999999999999999999999988532110 1 11 1 4899999999999995 22 4899999
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHhhCCC
Q 011311 457 KEVSEKARLALRDGGSSYAATGRLIEDLFGSVS 489 (489)
Q Consensus 457 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 489 (489)
+++++++++++.+||||+.++++||++++++.|
T Consensus 457 ~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~~ 489 (491)
T PLN02534 457 QELGVMARKAMELGGSSHINLSILIQDVLKQQS 489 (491)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999987643
No 14
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.9e-67 Score=528.58 Aligned_cols=441 Identities=34% Similarity=0.647 Sum_probs=325.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcc-cCcchHHHhhhhccCCCCCCCeEEE
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTAT-ASDNDAHIKSLAGAGATADVSIRFI 81 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~ 81 (489)
.+.||+++|+|++||++||+.||+.| +.+| ..+.||+..+... . ......+.+... ...++++|+
T Consensus 2 ~~~Hvvl~P~p~qGHi~P~l~LA~~L--a~~g------~~~~vti~~~~~~--~~~~~~~~~~~~~~----~~~~~i~~~ 67 (451)
T PLN03004 2 GEEAIVLYPAPPIGHLVSMVELGKTI--LSKN------PSLSIHIILVPPP--YQPESTATYISSVS----SSFPSITFH 67 (451)
T ss_pred CCcEEEEeCCcccchHHHHHHHHHHH--HhCC------CceEEEEEEecCc--chhhhhhhhhcccc----CCCCCeEEE
Confidence 36899999999999999999999999 8886 3234555433322 1 000011111111 112469999
Q ss_pred EcCCCCCCCC--CCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHH
Q 011311 82 GVPKMNPPPL--DYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAA 159 (489)
Q Consensus 82 ~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~ 159 (489)
.+|+..+... ....+....+..+.....+.+.+.|.++.. ..+++|||+|+++.|+..+|+++|||.++|++++++
T Consensus 68 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~ 145 (451)
T PLN03004 68 HLPAVTPYSSSSTSRHHHESLLLEILCFSNPSVHRTLFSLSR--NFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAA 145 (451)
T ss_pred EcCCCCCCCCccccccCHHHHHHHHHHhhhHHHHHHHHhcCC--CCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHH
Confidence 9997653211 111222333333444455556666665522 235699999999999999999999999999999999
Q ss_pred HHHHHhhccccCCCC-ccc-CcCCcccccCCCCCCCCCCCCcccccCCCc-hHHHHHHHHhhhccceEEecchhHhhHHH
Q 011311 160 FLGFVLHLPTRGGEE-FEE-SEADSADIFTYANPVPYRVLPSLCFNKHGG-FSAFENFGRRFKETKGIIVNTFEELESHA 236 (489)
Q Consensus 160 ~~~~~~~~~~~~~~~-~~~-~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gi~~~s~~~l~~~~ 236 (489)
.++.+.+.+...... ... .+..+..+||++ .++..++|..+...... +..+.+..+.+.+.+++++|||++||+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~v~iPg~p-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~ 224 (451)
T PLN03004 146 CLAFSFYLPTIDETTPGKNLKDIPTVHIPGVP-PMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRA 224 (451)
T ss_pred HHHHHHHHHhccccccccccccCCeecCCCCC-CCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHH
Confidence 888887754322110 001 111114688886 57888888766543221 34456666777788899999999999999
Q ss_pred HHHHhhcCC-CCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcC
Q 011311 237 VEYLMKCDG-VPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSG 315 (489)
Q Consensus 237 ~~~~~~~~~-~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~ 315 (489)
...+.. .. .++++.|||++....... .....+.+|.+|||++++++||||||||+..++.+++++++.+|+.++
T Consensus 225 l~~l~~-~~~~~~v~~vGPl~~~~~~~~----~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~ 299 (451)
T PLN03004 225 IKAITE-ELCFRNIYPIGPLIVNGRIED----RNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSG 299 (451)
T ss_pred HHHHHh-cCCCCCEEEEeeeccCccccc----cccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCC
Confidence 999865 22 257999999974321100 001124579999999988999999999999999999999999999999
Q ss_pred CeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-cccCHHHHhccCCcceEEecCCchhHHHHHHhCCc
Q 011311 316 VRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVP 394 (489)
Q Consensus 316 ~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP 394 (489)
.+|||+++...... .........+|++|.++.++++.++ +|+||.+||+|++++||||||||||++||+++|||
T Consensus 300 ~~FlW~~r~~~~~~-----~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP 374 (451)
T PLN03004 300 QRFLWVVRNPPELE-----KTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVP 374 (451)
T ss_pred CCEEEEEcCCcccc-----ccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCC
Confidence 99999998531000 0000112248999999998766555 99999999999999999999999999999999999
Q ss_pred EEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChH
Q 011311 395 IVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSY 474 (489)
Q Consensus 395 ~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~ 474 (489)
||+||+++||+.||+++++.||+|+.++.. +++.+++++|+++|+++|+ +++||+||++++++.++++.+||||+
T Consensus 375 ~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~----~~~~~~~e~l~~av~~vm~-~~~~r~~a~~~~~~a~~Av~~GGSS~ 449 (451)
T PLN03004 375 MVAWPLYAEQRFNRVMIVDEIKIAISMNES----ETGFVSSTEVEKRVQEIIG-ECPVRERTMAMKNAAELALTETGSSH 449 (451)
T ss_pred EEeccccccchhhHHHHHHHhCceEEecCC----cCCccCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999998878999999743 0126899999999999998 78999999999999999999999987
Q ss_pred H
Q 011311 475 A 475 (489)
Q Consensus 475 ~ 475 (489)
+
T Consensus 450 ~ 450 (451)
T PLN03004 450 T 450 (451)
T ss_pred C
Confidence 4
No 15
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=6.9e-67 Score=528.85 Aligned_cols=434 Identities=26% Similarity=0.466 Sum_probs=322.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEE
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIG 82 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 82 (489)
.++||+++|+|++||++||++||++|++++|| ++|||++++.. ...++.+. .....+++..
T Consensus 7 ~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G--------~~VT~v~t~~~-------~~~~~~~~----~~~~~~~~~~ 67 (456)
T PLN02210 7 QETHVLMVTLAFQGHINPMLKLAKHLSLSSKN--------LHFTLATTEQA-------RDLLSTVE----KPRRPVDLVF 67 (456)
T ss_pred CCCEEEEeCCcccccHHHHHHHHHHHHhhcCC--------cEEEEEeccch-------hhhhcccc----CCCCceEEEE
Confidence 46799999999999999999999994116899 88999998732 11122211 1123578877
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHHH
Q 011311 83 VPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLG 162 (489)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 162 (489)
++++.|++.+ .+...++..+.+. +...+.++++ ..++||||+|.++.|+..+|+++|||.++|++++++.+.
T Consensus 68 ~~~glp~~~~--~~~~~~~~~~~~~----~~~~l~~~l~--~~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~ 139 (456)
T PLN02210 68 FSDGLPKDDP--RAPETLLKSLNKV----GAKNLSKIIE--EKRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYS 139 (456)
T ss_pred CCCCCCCCcc--cCHHHHHHHHHHh----hhHHHHHHHh--cCCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHH
Confidence 7765554432 2333333333323 3344455544 237999999999999999999999999999999988877
Q ss_pred HHhhccccCCCCcccCc--CCcccccCCCCCCCCCCCCcccccCCC-chHHHH-HHHHhhhccceEEecchhHhhHHHHH
Q 011311 163 FVLHLPTRGGEEFEESE--ADSADIFTYANPVPYRVLPSLCFNKHG-GFSAFE-NFGRRFKETKGIIVNTFEELESHAVE 238 (489)
Q Consensus 163 ~~~~~~~~~~~~~~~~~--~~~~~~Pgl~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~gi~~~s~~~l~~~~~~ 238 (489)
.+.+..... ..+.... ..+..+|+++ +++..+++..+..... .+..+. +..+.....+++++|||.+||+.++.
T Consensus 140 ~~~~~~~~~-~~~~~~~~~~~~~~~Pgl~-~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~ 217 (456)
T PLN02210 140 VYYRYYMKT-NSFPDLEDLNQTVELPALP-LLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIE 217 (456)
T ss_pred HHHhhhhcc-CCCCcccccCCeeeCCCCC-CCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHH
Confidence 766542211 1111111 1114578875 5777788776543221 122222 33345566789999999999999998
Q ss_pred HHhhcCCCCCEEEecccccCC---CCCC-C-CCCC--CCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHH
Q 011311 239 YLMKCDGVPPVYNVGPMIDLH---GDIH-A-RPRG--GGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGL 311 (489)
Q Consensus 239 ~~~~~~~~p~~~~vGp~~~~~---~~~~-~-~~~~--~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al 311 (489)
.+.. . +++++|||+++.. .... . ++.. .+..+.+|.+|||++++++||||||||+...+.+++++++.+|
T Consensus 218 ~l~~--~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l 294 (456)
T PLN02210 218 SMAD--L-KPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKAL 294 (456)
T ss_pred HHhh--c-CCEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHH
Confidence 8865 2 5799999997421 1000 0 0000 0134567999999998889999999999988999999999999
Q ss_pred hhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhh-cCCCccccccCHHHHhccCCcceEEecCCchhHHHHHH
Q 011311 312 EKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERS-KGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVW 390 (489)
Q Consensus 312 ~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~ 390 (489)
+.+|.+|||+++.... ...+.++.++. ++++++++|+||.+||+|+++++|||||||||++||++
T Consensus 295 ~~~~~~flw~~~~~~~--------------~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~ 360 (456)
T PLN02210 295 KNRGVPFLWVIRPKEK--------------AQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVV 360 (456)
T ss_pred HhCCCCEEEEEeCCcc--------------ccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHH
Confidence 9999999999985310 11234555555 47888889999999999999999999999999999999
Q ss_pred hCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHh
Q 011311 391 FGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD--SEVRKRVKEVSEKARLALR 468 (489)
Q Consensus 391 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~~~~a~~l~~~~~~~~~ 468 (489)
+|||||+||+++||+.||+++++.||+|+.+.... .++.+++++|+++|+++|.++ +++|+||+++++.+++++.
T Consensus 361 ~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~---~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~ 437 (456)
T PLN02210 361 AGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA---VDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALA 437 (456)
T ss_pred cCCCEEecccccccHHHHHHHHHHhCeEEEEeccc---cCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999988679999986421 113689999999999999733 2799999999999999999
Q ss_pred cCCChHHHHHHHHHHHh
Q 011311 469 DGGSSYAATGRLIEDLF 485 (489)
Q Consensus 469 ~~g~~~~~~~~~~~~~~ 485 (489)
+||||+.++++||++++
T Consensus 438 ~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 438 PGGSSARNLDLFISDIT 454 (456)
T ss_pred CCCcHHHHHHHHHHHHh
Confidence 99999999999999986
No 16
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=2.3e-66 Score=521.69 Aligned_cols=427 Identities=23% Similarity=0.337 Sum_probs=315.1
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|..|+||+++|+|++||++|+++||+.| +++| ++|||+++.. +...+...+ ....+++|
T Consensus 1 ~~~~~hvv~~P~paqGHi~P~l~LAk~L--a~~G--------~~VT~vtt~~----------~~~~i~~~~-a~~~~i~~ 59 (442)
T PLN02208 1 MEPKFHAFMFPWFAFGHMIPFLHLANKL--AEKG--------HRVTFLLPKK----------AQKQLEHHN-LFPDSIVF 59 (442)
T ss_pred CCCCCEEEEecCccccHHHHHHHHHHHH--HhCC--------CEEEEEeccc----------hhhhhhccc-CCCCceEE
Confidence 5568999999999999999999999999 9999 7799999762 233332111 11225666
Q ss_pred EEcCC----CCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEech
Q 011311 81 IGVPK----MNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTS 156 (489)
Q Consensus 81 ~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~ 156 (489)
..++. +.+++.+...+....+..+.....+.+.+.++++++ ..++||||+| ++.|+..+|+.+|||+++|+++
T Consensus 60 ~~l~~p~~dgLp~g~~~~~~l~~~l~~~~~~~~~~~~~~l~~~L~--~~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~ 136 (442)
T PLN02208 60 HPLTIPPVNGLPAGAETTSDIPISMDNLLSEALDLTRDQVEAAVR--ALRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIV 136 (442)
T ss_pred EEeCCCCccCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhh
Confidence 66543 234443322122111122222222344444555554 2378999999 5789999999999999999999
Q ss_pred hHHHHHHHhhccccCCCCcccCcCCcccccCCCCC---CCCCCCCcccccCCCchHHHHHHH-HhhhccceEEecchhHh
Q 011311 157 GAAFLGFVLHLPTRGGEEFEESEADSADIFTYANP---VPYRVLPSLCFNKHGGFSAFENFG-RRFKETKGIIVNTFEEL 232 (489)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gi~~~s~~~l 232 (489)
+++.++ +.+.+. .. . . ..+|+++.. ++..+++.+ ......+..+.+.+ +...+++++++|||++|
T Consensus 137 ~a~~~~-~~~~~~--~~-~----~--~~~pglp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eL 205 (442)
T PLN02208 137 SATTIA-HTHVPG--GK-L----G--VPPPGYPSSKVLFRENDAHAL-ATLSIFYKRLYHQITTGLKSCDVIALRTCKEI 205 (442)
T ss_pred hHHHHH-HHccCc--cc-c----C--CCCCCCCCcccccCHHHcCcc-cccchHHHHHHHHHHhhhccCCEEEEECHHHH
Confidence 987654 444321 00 0 0 124666531 455566642 11111133333332 45667899999999999
Q ss_pred hHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHh
Q 011311 233 ESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLE 312 (489)
Q Consensus 233 ~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~ 312 (489)
|+.+..++.. +..|++++|||++.... ...+.+.+|.+|||++++++||||||||+..++.+++.+++.+|+
T Consensus 206 E~~~~~~~~~-~~~~~v~~vGpl~~~~~-------~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~ 277 (442)
T PLN02208 206 EGKFCDYISR-QYHKKVLLTGPMFPEPD-------TSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGME 277 (442)
T ss_pred HHHHHHHHHh-hcCCCEEEEeecccCcC-------CCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHH
Confidence 9999999876 34578999999985432 112467899999999988899999999999999999999999999
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-cccCHHHHhccCCcceEEecCCchhHHHHHHh
Q 011311 313 KSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILESVWF 391 (489)
Q Consensus 313 ~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~ 391 (489)
..+.+|+|+++..... ......+|++|.++..++++++ +|+||.+||+|+++++|||||||||++||+++
T Consensus 278 ~s~~pf~wv~r~~~~~---------~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~ 348 (442)
T PLN02208 278 LTGLPFLIAVKPPRGS---------STVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVS 348 (442)
T ss_pred hCCCcEEEEEeCCCcc---------cchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHc
Confidence 9999999999854110 0112358999999988777776 99999999999999999999999999999999
Q ss_pred CCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHH
Q 011311 392 GVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD----SEVRKRVKEVSEKARLAL 467 (489)
Q Consensus 392 GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~----~~~~~~a~~l~~~~~~~~ 467 (489)
|||||+||+++||+.||+++++.+|+|+.+... +++.+++++|+++|+++|+++ +++|+||+++++++.
T Consensus 349 GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~----~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~--- 421 (442)
T PLN02208 349 DCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE----KTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV--- 421 (442)
T ss_pred CCCEEecCcchhhHHHHHHHHHHhceeEEeccc----cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh---
Confidence 999999999999999999988878999998743 112499999999999999732 268999998888863
Q ss_pred hcCCChHHHHHHHHHHHhhC
Q 011311 468 RDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 468 ~~~g~~~~~~~~~~~~~~~~ 487 (489)
++|||+.++++||+++++.
T Consensus 422 -~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 422 -SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred -cCCcHHHHHHHHHHHHHHh
Confidence 3789999999999999753
No 17
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.2e-66 Score=524.96 Aligned_cols=446 Identities=24% Similarity=0.388 Sum_probs=322.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEE
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIG 82 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 82 (489)
.++||+++|+|++||++||++||+.| +.|| ++|||++++.+ ........ .....+++|+.
T Consensus 5 ~~~HVvl~P~paqGHi~P~l~LAk~L--a~~G--------~~vT~v~t~~n-------~~~~~~~~---~~~~~~i~~~~ 64 (472)
T PLN02670 5 EVLHVAMFPWLAMGHLIPFLRLSKLL--AQKG--------HKISFISTPRN-------LHRLPKIP---SQLSSSITLVS 64 (472)
T ss_pred CCcEEEEeCChhhhHHHHHHHHHHHH--HhCC--------CEEEEEeCCch-------HHhhhhcc---ccCCCCeeEEE
Confidence 46899999999999999999999999 9999 88999998733 11222111 11123689999
Q ss_pred cC----CCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhH
Q 011311 83 VP----KMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGA 158 (489)
Q Consensus 83 l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~ 158 (489)
+| ++.|++.++..+.......+.......++..++++++. .+++|||+|.++.|+..+|+++|||+++|+++++
T Consensus 65 lp~p~~dglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a 142 (472)
T PLN02670 65 FPLPSVPGLPSSAESSTDVPYTKQQLLKKAFDLLEPPLTTFLET--SKPDWIIYDYASHWLPSIAAELGISKAFFSLFTA 142 (472)
T ss_pred CCCCccCCCCCCcccccccchhhHHHHHHHHHHhHHHHHHHHHh--CCCcEEEECCcchhHHHHHHHcCCCEEEEehhhH
Confidence 98 33344433322221111111222223444455555542 3689999999999999999999999999999999
Q ss_pred HHHHHHhhccccCCCC-cccCcCCcccccCCCC-----CCCCCCCCcccccCC---CchHHHHHHHHhhhccceEEecch
Q 011311 159 AFLGFVLHLPTRGGEE-FEESEADSADIFTYAN-----PVPYRVLPSLCFNKH---GGFSAFENFGRRFKETKGIIVNTF 229 (489)
Q Consensus 159 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~Pgl~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gi~~~s~ 229 (489)
+.++.+.+.......+ ....+.....+|++.. .+...+++.++.... .....+.+......+++|+++|||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf 222 (472)
T PLN02670 143 ATLSFIGPPSSLMEGGDLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSS 222 (472)
T ss_pred HHHHHHhhhHhhhhcccCCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCH
Confidence 8877765442211111 1111111012444311 134457776553211 113344455556677889999999
Q ss_pred hHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCC-CChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHH
Q 011311 230 EELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGG-TQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIA 308 (489)
Q Consensus 230 ~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~ 308 (489)
++||+.+...+.. ...++++.|||+.+...... ...... ...++|.+|||++++++||||||||+..++.+++.+++
T Consensus 223 ~eLE~~~l~~l~~-~~~~~v~~VGPl~~~~~~~~-~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela 300 (472)
T PLN02670 223 PEFEPEWFDLLSD-LYRKPIIPIGFLPPVIEDDE-EDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELA 300 (472)
T ss_pred HHHhHHHHHHHHH-hhCCCeEEEecCCccccccc-cccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHH
Confidence 9999999999876 22357999999975311000 000000 12367999999998889999999999999999999999
Q ss_pred HHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-cccCHHHHhccCCcceEEecCCchhHHH
Q 011311 309 SGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILE 387 (489)
Q Consensus 309 ~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~e 387 (489)
.+|+.++.+|||+++..... + ......+|++|.++.+++++++ +|+||.+||+|+++++|||||||||++|
T Consensus 301 ~gl~~s~~~FlWv~r~~~~~-----~---~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~E 372 (472)
T PLN02670 301 LGLEKSETPFFWVLRNEPGT-----T---QNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVE 372 (472)
T ss_pred HHHHHCCCCEEEEEcCCccc-----c---cchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHH
Confidence 99999999999999853100 0 0112358999999999998886 9999999999999999999999999999
Q ss_pred HHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHH
Q 011311 388 SVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD--SEVRKRVKEVSEKARL 465 (489)
Q Consensus 388 al~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~~~~a~~l~~~~~~ 465 (489)
|+++|||||+||+++||+.||+++++ +|+|+.+.... .++.+++++|+++|+++|.++ ++||+||+++++++++
T Consensus 373 ai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~l~~~~---~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~ 448 (472)
T PLN02670 373 GLGFGRVLILFPVLNEQGLNTRLLHG-KKLGLEVPRDE---RDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD 448 (472)
T ss_pred HHHcCCCEEeCcchhccHHHHHHHHH-cCeeEEeeccc---cCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999865 59999997431 113689999999999999733 2899999999999886
Q ss_pred HHhcCCChHHHHHHHHHHHhhCC
Q 011311 466 ALRDGGSSYAATGRLIEDLFGSV 488 (489)
Q Consensus 466 ~~~~~g~~~~~~~~~~~~~~~~~ 488 (489)
. +...+++++|++.|+++.
T Consensus 449 ~----~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 449 M----DRNNRYVDELVHYLRENR 467 (472)
T ss_pred c----chhHHHHHHHHHHHHHhc
Confidence 5 677789999999998875
No 18
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=4e-66 Score=516.99 Aligned_cols=427 Identities=23% Similarity=0.358 Sum_probs=314.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV 83 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l 83 (489)
|+||+++|+|++||++||+.||+.| +.+| ++|||++++.+ .+.+..+. .......+.+..+
T Consensus 5 ~~Hvvl~P~paqGHi~P~l~LAk~L--a~~g--------~~vT~~tt~~~-------~~~~~~~~--~~~~~~~v~~~~~ 65 (453)
T PLN02764 5 KFHVLMYPWFATGHMTPFLFLANKL--AEKG--------HTVTFLLPKKA-------LKQLEHLN--LFPHNIVFRSVTV 65 (453)
T ss_pred CcEEEEECCcccccHHHHHHHHHHH--HhCC--------CEEEEEeCcch-------hhhhcccc--cCCCCceEEEEEC
Confidence 6899999999999999999999999 9999 88999998732 12222210 0000123777777
Q ss_pred C--CCCCCCCCCCCChH-HHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHH
Q 011311 84 P--KMNPPPLDYFKSPE-KFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAF 160 (489)
Q Consensus 84 ~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 160 (489)
| ++.|++.+++.+.. .....+.... ..+.+.++++++. .+++|||+|+ +.|+.++|+++|||++.|++++++.
T Consensus 66 p~~~glp~g~e~~~~~~~~~~~~~~~a~-~~~~~~~~~~l~~--~~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~ 141 (453)
T PLN02764 66 PHVDGLPVGTETVSEIPVTSADLLMSAM-DLTRDQVEVVVRA--VEPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSAST 141 (453)
T ss_pred CCcCCCCCcccccccCChhHHHHHHHHH-HHhHHHHHHHHHh--CCCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHH
Confidence 7 33354434321111 1112222222 2334455555542 2679999995 8899999999999999999999988
Q ss_pred HHHHhhccccCCCCcccCcCCcccccCCCC---CCCCCCCCcccc--cCCC--ch-HHHHHHHHhhhccceEEecchhHh
Q 011311 161 LGFVLHLPTRGGEEFEESEADSADIFTYAN---PVPYRVLPSLCF--NKHG--GF-SAFENFGRRFKETKGIIVNTFEEL 232 (489)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~---~~~~~~~~~~~~--~~~~--~~-~~~~~~~~~~~~~~gi~~~s~~~l 232 (489)
++.+.+ +. ..+ . ..+|+++. .++..+++.... .... .. ..+.+..+.....+++++|||++|
T Consensus 142 ~~~~~~-~~---~~~-----~-~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eL 211 (453)
T PLN02764 142 IASMLV-PG---GEL-----G-VPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREI 211 (453)
T ss_pred HHHHhc-cc---ccC-----C-CCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHh
Confidence 777653 11 000 0 12366652 244555554211 1011 12 222333356677889999999999
Q ss_pred hHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHh
Q 011311 233 ESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLE 312 (489)
Q Consensus 233 ~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~ 312 (489)
|+.+..++.. ...++++.|||+++.... ....+.+|.+|||++++++||||||||+..++.+|+.+++.+|+
T Consensus 212 E~~~~~~~~~-~~~~~v~~VGPL~~~~~~-------~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~ 283 (453)
T PLN02764 212 EGNFCDYIEK-HCRKKVLLTGPVFPEPDK-------TRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGME 283 (453)
T ss_pred hHHHHHHHHh-hcCCcEEEeccCccCccc-------cccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHH
Confidence 9999999875 223579999999754310 01235689999999999999999999999999999999999999
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-cccCHHHHhccCCcceEEecCCchhHHHHHHh
Q 011311 313 KSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILESVWF 391 (489)
Q Consensus 313 ~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~ 391 (489)
..+.+|+|+++.... .+.....+|++|.++.+++++++ +|+||.+||+|+++++|||||||||++||+++
T Consensus 284 ~s~~pflwv~r~~~~---------~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~ 354 (453)
T PLN02764 284 LTGSPFLVAVKPPRG---------SSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLS 354 (453)
T ss_pred hCCCCeEEEEeCCCC---------CcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHc
Confidence 999999999985310 01112458999999999998888 99999999999999999999999999999999
Q ss_pred CCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHH
Q 011311 392 GVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD----SEVRKRVKEVSEKARLAL 467 (489)
Q Consensus 392 GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~----~~~~~~a~~l~~~~~~~~ 467 (489)
|||||+||++.||+.||+++++.+|+|+.+..+ +.+.+++++|+++|+++|+++ +++|+||++++++++
T Consensus 355 GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~----~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~--- 427 (453)
T PLN02764 355 DCQIVLVPQLGDQVLNTRLLSDELKVSVEVARE----ETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA--- 427 (453)
T ss_pred CCCEEeCCcccchHHHHHHHHHHhceEEEeccc----cCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH---
Confidence 999999999999999999998778999987532 012589999999999999732 257888888877764
Q ss_pred hcCCChHHHHHHHHHHHhhCC
Q 011311 468 RDGGSSYAATGRLIEDLFGSV 488 (489)
Q Consensus 468 ~~~g~~~~~~~~~~~~~~~~~ 488 (489)
+||||+.++++||+++++..
T Consensus 428 -~~GSS~~~l~~lv~~~~~~~ 447 (453)
T PLN02764 428 -SPGLLTGYVDNFIESLQDLV 447 (453)
T ss_pred -hcCCHHHHHHHHHHHHHHhc
Confidence 47999999999999998643
No 19
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=7.8e-66 Score=518.41 Aligned_cols=426 Identities=25% Similarity=0.372 Sum_probs=312.4
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|..|+||+++|+|++||++||+.||+.| +++| ++|||++++.. ...++... ....+++|
T Consensus 1 ~~~~~HVvlvPfpaqGHi~PmL~LAk~L--as~G--------~~VT~vtt~~~-------~~~i~~~~----~~~~~i~~ 59 (446)
T PLN00414 1 MGSKFHAFMYPWFGFGHMIPYLHLANKL--AEKG--------HRVTFFLPKKA-------HKQLQPLN----LFPDSIVF 59 (446)
T ss_pred CCCCCEEEEecCcccchHHHHHHHHHHH--HhCC--------CEEEEEeCCch-------hhhhcccc----cCCCceEE
Confidence 5568999999999999999999999999 9999 88999997622 12222211 11235888
Q ss_pred EEcC----CCCCCCCCCCCChHHH-HHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEec
Q 011311 81 IGVP----KMNPPPLDYFKSPEKF-ITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFT 155 (489)
Q Consensus 81 ~~l~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~ 155 (489)
..++ ++.|++.+...+.... ...+.. ....+...++++++ ..++||||+|+ +.|+..+|+++|||++.|++
T Consensus 60 ~~i~lP~~dGLP~g~e~~~~l~~~~~~~~~~-a~~~l~~~l~~~L~--~~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~ 135 (446)
T PLN00414 60 EPLTLPPVDGLPFGAETASDLPNSTKKPIFD-AMDLLRDQIEAKVR--ALKPDLIFFDF-VHWVPEMAKEFGIKSVNYQI 135 (446)
T ss_pred EEecCCCcCCCCCcccccccchhhHHHHHHH-HHHHHHHHHHHHHh--cCCCeEEEECC-chhHHHHHHHhCCCEEEEec
Confidence 5554 3334443332222111 111222 22244444555554 23679999995 88999999999999999999
Q ss_pred hhHHHHHHHhhccccCCCCcccCcCCcccccCCCC---CCCCCC--CCcccccCCCchHHHHHHHHhhhccceEEecchh
Q 011311 156 SGAAFLGFVLHLPTRGGEEFEESEADSADIFTYAN---PVPYRV--LPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFE 230 (489)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~ 230 (489)
++++.++.+.+... . . . ..+|+++. .++..+ ++.++. . ....+.+..+...+++++++|||+
T Consensus 136 ~~a~~~~~~~~~~~--~--~----~--~~~pg~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~vlvNTf~ 202 (446)
T PLN00414 136 ISAACVAMVLAPRA--E--L----G--FPPPDYPLSKVALRGHDANVCSLFA-N--SHELFGLITKGLKNCDVVSIRTCV 202 (446)
T ss_pred HHHHHHHHHhCcHh--h--c----C--CCCCCCCCCcCcCchhhcccchhhc-c--cHHHHHHHHHhhccCCEEEEechH
Confidence 99988777665211 0 0 0 12355542 122222 122221 1 123445555667788999999999
Q ss_pred HhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHH
Q 011311 231 ELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASG 310 (489)
Q Consensus 231 ~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a 310 (489)
+||+.+.+.+.. ...++++.|||+++..... .....+.+|.+|||.+++++||||||||+...+.+++.+++.+
T Consensus 203 eLE~~~~~~~~~-~~~~~v~~VGPl~~~~~~~-----~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~g 276 (446)
T PLN00414 203 ELEGNLCDFIER-QCQRKVLLTGPMLPEPQNK-----SGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLG 276 (446)
T ss_pred HHHHHHHHHHHH-hcCCCeEEEcccCCCcccc-----cCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHH
Confidence 999999998876 2235699999997533210 0112346799999999999999999999999999999999999
Q ss_pred HhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-cccCHHHHhccCCcceEEecCCchhHHHHH
Q 011311 311 LEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILESV 389 (489)
Q Consensus 311 l~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~eal 389 (489)
|+.+|.+|+|+++..... ......+|++|.++.+++++++ +|+||.+||+|+++++|||||||||++||+
T Consensus 277 L~~s~~~Flwvvr~~~~~---------~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~ 347 (446)
T PLN00414 277 MELTGLPFLIAVMPPKGS---------STVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESL 347 (446)
T ss_pred HHHcCCCeEEEEecCCCc---------ccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHH
Confidence 999999999999864210 0112458999999999999888 999999999999999999999999999999
Q ss_pred HhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHHH
Q 011311 390 WFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD----SEVRKRVKEVSEKARL 465 (489)
Q Consensus 390 ~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~----~~~~~~a~~l~~~~~~ 465 (489)
++|||||+||++.||+.||+++++.+|+|+.+..+ +++.+++++|+++|+++|+++ +++|+||+++++.+.
T Consensus 348 ~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~----~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~- 422 (446)
T PLN00414 348 VSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRE----DSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV- 422 (446)
T ss_pred HcCCCEEecCcccchHHHHHHHHHHhCeEEEeccc----cCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH-
Confidence 99999999999999999999998778999998642 112589999999999999732 258999999998864
Q ss_pred HHhcCCChHHHHHHHHHHHhhC
Q 011311 466 ALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 466 ~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
++||+| ..+++||+++++.
T Consensus 423 --~~gg~s-s~l~~~v~~~~~~ 441 (446)
T PLN00414 423 --SPGLLS-GYADKFVEALENE 441 (446)
T ss_pred --cCCCcH-HHHHHHHHHHHHh
Confidence 447734 3489999999753
No 20
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=6.3e-66 Score=525.29 Aligned_cols=436 Identities=28% Similarity=0.458 Sum_probs=328.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhc--CCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDR--DNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~r--G~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
.++||+++|+|++||++||++||++| +++ | |+|||++++.. .+.+... ....+++|
T Consensus 9 ~~~hVvlvp~pa~GHi~P~l~LA~~L--~~~~~G--------~~VT~~~t~~~----------~~~i~~~--~~~~gi~f 66 (459)
T PLN02448 9 TSCHVVAMPYPGRGHINPMMNLCKLL--ASRKPD--------ILITFVVTEEW----------LGLIGSD--PKPDNIRF 66 (459)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHH--HcCCCC--------cEEEEEeCCch----------HhHhhcc--CCCCCEEE
Confidence 46899999999999999999999999 999 8 77999998732 3333310 11247999
Q ss_pred EEcCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHH
Q 011311 81 IGVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAF 160 (489)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 160 (489)
+.+|+..+.+.+...+...++..+.+...+.+++.++++ ..++||||+|.++.|+..+|+++|||++.|+++++..
T Consensus 67 v~lp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~ 142 (459)
T PLN02448 67 ATIPNVIPSELVRAADFPGFLEAVMTKMEAPFEQLLDRL----EPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATF 142 (459)
T ss_pred EECCCCCCCccccccCHHHHHHHHHHHhHHHHHHHHHhc----CCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHH
Confidence 999975444332222333344433333444455554443 2478999999999999999999999999999999877
Q ss_pred HHHHhhccccCCCC---cccC---cCCcccccCCCCCCCCCCCCcccccCCCc-hHHHHHHHHhhhccceEEecchhHhh
Q 011311 161 LGFVLHLPTRGGEE---FEES---EADSADIFTYANPVPYRVLPSLCFNKHGG-FSAFENFGRRFKETKGIIVNTFEELE 233 (489)
Q Consensus 161 ~~~~~~~~~~~~~~---~~~~---~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gi~~~s~~~l~ 233 (489)
++.+.+.+...... ...+ +.....+|+++ +++..+++..+...... +..+...+....+.+++++|||++||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE 221 (459)
T PLN02448 143 FSVFYHFDLLPQNGHFPVELSESGEERVDYIPGLS-STRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELE 221 (459)
T ss_pred HHHHHHhhhhhhccCCCCccccccCCccccCCCCC-CCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhh
Confidence 77766654322111 1110 11102477775 56777777655433221 44556666666777899999999999
Q ss_pred HHHHHHHhhcCCCCCEEEecccccCCCCCC-CCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHh
Q 011311 234 SHAVEYLMKCDGVPPVYNVGPMIDLHGDIH-ARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLE 312 (489)
Q Consensus 234 ~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~ 312 (489)
+.+...+.. ...++++.|||+.+...... .........+.++.+||+.++++++|||||||+...+.+++.+++++|+
T Consensus 222 ~~~~~~l~~-~~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~ 300 (459)
T PLN02448 222 AQAIDALKS-KFPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLR 300 (459)
T ss_pred HHHHHHHHh-hcCCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHH
Confidence 999988865 23347999999975321100 0000001123589999999988899999999998888999999999999
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhC
Q 011311 313 KSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFG 392 (489)
Q Consensus 313 ~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~G 392 (489)
..+++|||+++... .++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|
T Consensus 301 ~~~~~~lw~~~~~~-------------------~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~G 361 (459)
T PLN02448 301 DSGVRFLWVARGEA-------------------SRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAG 361 (459)
T ss_pred hCCCCEEEEEcCch-------------------hhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcC
Confidence 99999999876431 23444455788889999999999999999999999999999999999
Q ss_pred CcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHHh
Q 011311 393 VPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD----SEVRKRVKEVSEKARLALR 468 (489)
Q Consensus 393 vP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~----~~~~~~a~~l~~~~~~~~~ 468 (489)
||||+||+++||+.||+++++.||+|+.+.... +.++.+++++|+++|+++|+++ ++||+||+++++++++++.
T Consensus 362 vP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~--~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~ 439 (459)
T PLN02448 362 VPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV--GEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIA 439 (459)
T ss_pred CCEEeccccccchhhHHHHHHHhCceEEEeccc--ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998889999886320 0113689999999999999731 3899999999999999999
Q ss_pred cCCChHHHHHHHHHHHhhC
Q 011311 469 DGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 469 ~~g~~~~~~~~~~~~~~~~ 487 (489)
+||||++++++||+++++-
T Consensus 440 ~gGss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 440 KGGSSDTNLDAFIRDISQG 458 (459)
T ss_pred CCCcHHHHHHHHHHHHhcc
Confidence 9999999999999999864
No 21
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=3.8e-65 Score=522.12 Aligned_cols=452 Identities=28% Similarity=0.462 Sum_probs=319.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhcc----CCCCCCCe
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGA----GATADVSI 78 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 78 (489)
+++||+++|+|++||++|++.||++| +.|| ++|||++++.. ...++..... .......+
T Consensus 4 ~~~hVvlvp~pa~GHi~P~L~LAk~L--~~rG--------~~VT~vtt~~~-------~~~i~~~~a~~~~~~~~~~~~~ 66 (482)
T PLN03007 4 EKLHILFFPFMAHGHMIPTLDMAKLF--SSRG--------AKSTILTTPLN-------AKIFEKPIEAFKNLNPGLEIDI 66 (482)
T ss_pred CCcEEEEECCCccccHHHHHHHHHHH--HhCC--------CEEEEEECCCc-------hhhhhhhhhhhcccCCCCcceE
Confidence 46799999999999999999999999 9999 77999998733 1112221100 00001145
Q ss_pred EEEEcCC---CCCCCCCCCC--------ChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhC
Q 011311 79 RFIGVPK---MNPPPLDYFK--------SPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELG 147 (489)
Q Consensus 79 ~f~~l~~---~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lg 147 (489)
.+..+|. +.|++.+... ....++..+. ...+.+.+.++++++ ..++||||+|.++.|+..+|+++|
T Consensus 67 ~~~~~p~~~~glP~g~e~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~l~--~~~~~~IV~D~~~~w~~~vA~~lg 143 (482)
T PLN03007 67 QIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFL-FSTKYFKDQLEKLLE--TTRPDCLVADMFFPWATEAAEKFG 143 (482)
T ss_pred EEeeCCCCcCCCCCCcccccccccccccchHHHHHHHH-HHHHHHHHHHHHHHh--cCCCCEEEECCcchhHHHHHHHhC
Confidence 5555652 3344433221 1122333333 223455566666665 347899999999999999999999
Q ss_pred CCeEEEechhHHHHHHHhhccccCCC-CcccCcCCcccccCCCC--CCCCCCCCcccccCCCchHHHHHHHHhhhccceE
Q 011311 148 VPSYVFFTSGAAFLGFVLHLPTRGGE-EFEESEADSADIFTYAN--PVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGI 224 (489)
Q Consensus 148 iP~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pgl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 224 (489)
||+++|++++++....+......... .....+.. ..+|+++. .++..+++.. .........+....+...+.+++
T Consensus 144 IP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~pg~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v 221 (482)
T PLN03007 144 VPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSEP-FVIPDLPGDIVITEEQINDA-DEESPMGKFMKEVRESEVKSFGV 221 (482)
T ss_pred CCeEEeecccHHHHHHHHHHHhcccccccCCCCce-eeCCCCCCccccCHHhcCCC-CCchhHHHHHHHHHhhcccCCEE
Confidence 99999999888766655433211110 01111111 34777753 2333444421 11111122233444566778899
Q ss_pred EecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCC---CCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCH
Q 011311 225 IVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIH---ARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGE 301 (489)
Q Consensus 225 ~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~ 301 (489)
++||+++||..+...+.+ ...+++++|||+........ .++......+.+|.+|||.+++++||||||||+...+.
T Consensus 222 l~Nt~~~le~~~~~~~~~-~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~ 300 (482)
T PLN03007 222 LVNSFYELESAYADFYKS-FVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKN 300 (482)
T ss_pred EEECHHHHHHHHHHHHHh-ccCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCH
Confidence 999999999998888875 22246999999865322100 00001111357899999999889999999999998889
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCcc-ccccCHHHHhccCCcceEEecC
Q 011311 302 EQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMI-CGWAPQKEVLAHSAIGGFVSHC 380 (489)
Q Consensus 302 ~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v-~~w~pq~~iL~~~~~~~~i~Hg 380 (489)
+++.+++.+|+.++++|||+++.... ..+....+|++|.++..+++.+ .+|+||.+||+|++++||||||
T Consensus 301 ~~~~~~~~~l~~~~~~flw~~~~~~~---------~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~ 371 (482)
T PLN03007 301 EQLFEIAAGLEGSGQNFIWVVRKNEN---------QGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHC 371 (482)
T ss_pred HHHHHHHHHHHHCCCCEEEEEecCCc---------ccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecC
Confidence 99999999999999999999986421 0011234888998887655554 5999999999999999999999
Q ss_pred CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecccc-CCCCccCHHHHHHHHHHHhcCCH---HHHHHH
Q 011311 381 GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRR-GTENHVMADELARAVGCVMDGDS---EVRKRV 456 (489)
Q Consensus 381 G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~-~~~~~~~~~~l~~ai~~vl~~~~---~~~~~a 456 (489)
||||++||+++|||||+||+++||+.||+++++.+++|+.+...... .+.+.+++++|+++|+++|. ++ +||+||
T Consensus 372 G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~-~~~~~~~r~~a 450 (482)
T PLN03007 372 GWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIV-GEEAEERRLRA 450 (482)
T ss_pred cchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhc-CcHHHHHHHHH
Confidence 99999999999999999999999999999998877788776321000 01136899999999999998 44 999999
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHhhC
Q 011311 457 KEVSEKARLALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 457 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
+++++++++++.+||||+.++++||+++++.
T Consensus 451 ~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 451 KKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999864
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=1.1e-45 Score=379.14 Aligned_cols=389 Identities=19% Similarity=0.179 Sum_probs=252.9
Q ss_pred EEEE-EcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcC
Q 011311 6 ELVF-IPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVP 84 (489)
Q Consensus 6 ~i~~-~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ 84 (489)
+|+. +|.++.+|..-+-+++++| ++|| |+||++++... ...+. ....+++.+.++
T Consensus 22 kIl~~~P~~~~SH~~~~~~l~~~L--a~rG--------H~VTvi~p~~~--------~~~~~------~~~~~~~~i~~~ 77 (507)
T PHA03392 22 RILAVFPTPAYSHHSVFKVYVEAL--AERG--------HNVTVIKPTLR--------VYYAS------HLCGNITEIDAS 77 (507)
T ss_pred cEEEEcCCCCCcHHHHHHHHHHHH--HHcC--------CeEEEEecccc--------ccccc------CCCCCEEEEEcC
Confidence 4664 4889999999999999999 9999 56999976521 00100 012456666554
Q ss_pred CCCCC------CCCC------CCChHHHH----HHHHHHhhHHH-HHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHh-
Q 011311 85 KMNPP------PLDY------FKSPEKFI----TEYVDSHKDCI-KEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANEL- 146 (489)
Q Consensus 85 ~~~~~------~~~~------~~~~~~~~----~~~~~~~~~~~-~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~l- 146 (489)
..... .... ..+..... ..+...+...+ ...+.+++++.+.++|+||+|++..|+..+|+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~ 157 (507)
T PHA03392 78 LSVEYFKKLVKSSAVFRKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFG 157 (507)
T ss_pred CChHHHHHHHhhhhHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhC
Confidence 21100 0000 00001111 11111222222 1223444432345799999999988999999999
Q ss_pred CCCeEEEechhHHHHHHHhhccccCCCCcc-cCcCCcccccCCCCCCCC-CCCCcccccCCC----c--hHHHHHHHHhh
Q 011311 147 GVPSYVFFTSGAAFLGFVLHLPTRGGEEFE-ESEADSADIFTYANPVPY-RVLPSLCFNKHG----G--FSAFENFGRRF 218 (489)
Q Consensus 147 giP~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Pgl~~~~~~-~~~~~~~~~~~~----~--~~~~~~~~~~~ 218 (489)
++|.|.+++........ .. .+ .+.++ +|+|.+.....- ..+...+.+... . +..+....+.+
T Consensus 158 ~~p~i~~ss~~~~~~~~--~~-------~gg~p~~~-syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l 227 (507)
T PHA03392 158 DAPVIQISSGYGLAENF--ET-------MGAVSRHP-VYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKL 227 (507)
T ss_pred CCCEEEEcCCCCchhHH--Hh-------hccCCCCC-eeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 99987776643321111 00 11 22233 667755322210 001111111000 0 00000111111
Q ss_pred -hccceEEecchhHhhHHHHHHHhhc--------CCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceE
Q 011311 219 -KETKGIIVNTFEELESHAVEYLMKC--------DGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVV 289 (489)
Q Consensus 219 -~~~~gi~~~s~~~l~~~~~~~~~~~--------~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV 289 (489)
++..+...+++.++..+....+.+. +..|++++|||++.... +.+++++++.+|+++++ +++|
T Consensus 228 ~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~rp~~p~v~~vGgi~~~~~-------~~~~l~~~l~~fl~~~~-~g~V 299 (507)
T PHA03392 228 LKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNNRPVPPSVQYLGGLHLHKK-------PPQPLDDYLEEFLNNST-NGVV 299 (507)
T ss_pred HHHHcCCCCCCHHHHHhCCcEEEEecCccccCCCCCCCCeeeecccccCCC-------CCCCCCHHHHHHHhcCC-CcEE
Confidence 1222211233444444332222111 35667999999976432 11467899999999874 5799
Q ss_pred EEeecCCc---CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHH
Q 011311 290 FLCFGSMG---SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKE 366 (489)
Q Consensus 290 ~vs~GS~~---~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~ 366 (489)
||||||+. .++.+.+..+++++++.+++|||++++.. .+ ...++|+++++|+||.+
T Consensus 300 ~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~-----------------~~----~~~p~Nv~i~~w~Pq~~ 358 (507)
T PHA03392 300 YVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV-----------------EA----INLPANVLTQKWFPQRA 358 (507)
T ss_pred EEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCc-----------------Cc----ccCCCceEEecCCCHHH
Confidence 99999986 35778899999999999999999998541 11 02247889999999999
Q ss_pred HhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHh
Q 011311 367 VLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVM 446 (489)
Q Consensus 367 iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl 446 (489)
||+|+.+++||||||+||++||+++|||+|++|+++||+.||+|+++. |+|+.++.. ++|+++|+++|++++
T Consensus 359 lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~~-------~~t~~~l~~ai~~vl 430 (507)
T PHA03392 359 VLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDTV-------TVSAAQLVLAIVDVI 430 (507)
T ss_pred HhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHc-CcEEEeccC-------CcCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999776 999999875 899999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHH
Q 011311 447 DGDSEVRKRVKEVSEKARLA 466 (489)
Q Consensus 447 ~~~~~~~~~a~~l~~~~~~~ 466 (489)
+ |++||+||+++++.+++.
T Consensus 431 ~-~~~y~~~a~~ls~~~~~~ 449 (507)
T PHA03392 431 E-NPKYRKNLKELRHLIRHQ 449 (507)
T ss_pred C-CHHHHHHHHHHHHHHHhC
Confidence 8 899999999999999985
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=4e-46 Score=388.39 Aligned_cols=385 Identities=23% Similarity=0.351 Sum_probs=216.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPK 85 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~ 85 (489)
+|+++|. +.+|+.++..|+++| ++|| |+ ||++++... ..... ....++++..++.
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L--~~rG------H~--VTvl~~~~~--------~~~~~------~~~~~~~~~~~~~ 56 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEEL--AERG------HN--VTVLTPSPS--------SSLNP------SKPSNIRFETYPD 56 (500)
T ss_dssp -----------SHHHHHHHHHHH--HHH-------TT--SEEEHHHHH--------HT------------S-CCEEEE--
T ss_pred EEEEeCC-CcCHHHHHHHHHHHH--HhcC------Cc--eEEEEeecc--------ccccc------ccccceeeEEEcC
Confidence 4788885 789999999999999 9999 55 999976411 01111 1133566666654
Q ss_pred CCCCCC-CC-CCCh-HHHHH---------HHHHHh---hHHHHHHHHHHHhc-------CCCCeeEEEeCCCCchHHHHH
Q 011311 86 MNPPPL-DY-FKSP-EKFIT---------EYVDSH---KDCIKEAIIEHVLN-------NNVKIAGLVLDFFCSSMIDTA 143 (489)
Q Consensus 86 ~~~~~~-~~-~~~~-~~~~~---------~~~~~~---~~~~~~~l~~~~~~-------~~~~~D~VI~D~~~~~~~~vA 143 (489)
..+... .. .... ...+. ...... ........+.++.+ ...++|++|+|.+..|+..+|
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~~~fDlvI~d~f~~c~~~la 136 (500)
T PF00201_consen 57 PYPEEEFEEIFPEFISKFFSESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKSEKFDLVISDAFDPCGLALA 136 (500)
T ss_dssp ---TT------TTHHHHHHHHHCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHHHHHCT-EEEEEESSHHHHH
T ss_pred CcchHHHhhhhHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhccccceEeeccchhHHHH
Confidence 432111 11 1111 11111 111110 00111111111110 123689999999988899999
Q ss_pred HHhCCCeEEEechhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCC-Cc-hHHHHH-HHHhhhc
Q 011311 144 NELGVPSYVFFTSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKH-GG-FSAFEN-FGRRFKE 220 (489)
Q Consensus 144 ~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~~ 220 (489)
+.+++|.+.+.+... .........+.+..+ .++|.....+ .+...+ .++. .. ...... .......
T Consensus 137 ~~l~iP~i~~~s~~~--------~~~~~~~~~g~p~~p-syvP~~~s~~--~~~msf-~~Ri~N~l~~~~~~~~~~~~~~ 204 (500)
T PF00201_consen 137 HYLGIPVIIISSSTP--------MYDLSSFSGGVPSPP-SYVPSMFSDF--SDRMSF-WQRIKNFLFYLYFRFIFRYFFS 204 (500)
T ss_dssp HHHHHTHHHHHHCCS--------CSCCTCCTSCCCTST-TSTTCBCCCS--GTTSSS-ST--TTSHHHHHHHHHHHHGGG
T ss_pred HHhcCCeEEEecccc--------cchhhhhccCCCCCh-HHhccccccC--CCccch-hhhhhhhhhhhhhccccccchh
Confidence 999999865432211 000000001222222 4555432211 111111 1111 11 111111 1111111
Q ss_pred c-c--eEEe----cchhHhhHHHHHHHhhc--------CCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCC
Q 011311 221 T-K--GIIV----NTFEELESHAVEYLMKC--------DGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPA 285 (489)
Q Consensus 221 ~-~--gi~~----~s~~~l~~~~~~~~~~~--------~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 285 (489)
. + .... .+..++.......+.+. +..|+++++|+++.... ++++.++..|++...+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~prp~~p~v~~vGgl~~~~~---------~~l~~~~~~~~~~~~~ 275 (500)
T PF00201_consen 205 PQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLDFPRPLLPNVVEVGGLHIKPA---------KPLPEELWNFLDSSGK 275 (500)
T ss_dssp S-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE----HHHHCTSTTGCGC-S-------------TCHHHHHHHTSTTTT
T ss_pred hHHHHHhhhcccccccHHHHHHHHHHhhhccccCcCCcchhhcccccCccccccc---------cccccccchhhhccCC
Confidence 1 0 0011 12223333333222221 24466888999876543 4789999999998556
Q ss_pred CceEEEeecCCcC-CCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCH
Q 011311 286 SSVVFLCFGSMGS-FGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQ 364 (489)
Q Consensus 286 ~~vV~vs~GS~~~-~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq 364 (489)
+++|||||||+.. ++.+.+++++++|++++.+|||++++.. +. ..++|+++++|+||
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~------------------~~----~l~~n~~~~~W~PQ 333 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEP------------------PE----NLPKNVLIVKWLPQ 333 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSH------------------GC----HHHTTEEEESS--H
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccc------------------cc----cccceEEEeccccc
Confidence 7899999999874 4445588899999999999999997641 11 23478899999999
Q ss_pred HHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHH
Q 011311 365 KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGC 444 (489)
Q Consensus 365 ~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~ 444 (489)
.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++++. |+|+.++.. ++|+++|.++|++
T Consensus 334 ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~~~-------~~~~~~l~~ai~~ 405 (500)
T PF00201_consen 334 NDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLDKN-------DLTEEELRAAIRE 405 (500)
T ss_dssp HHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEGGG-------C-SHHHHHHHHHH
T ss_pred hhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEE-eeEEEEEec-------CCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998887 999999876 8999999999999
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHH
Q 011311 445 VMDGDSEVRKRVKEVSEKARLAL 467 (489)
Q Consensus 445 vl~~~~~~~~~a~~l~~~~~~~~ 467 (489)
+|+ |++|++||+++++++++..
T Consensus 406 vl~-~~~y~~~a~~ls~~~~~~p 427 (500)
T PF00201_consen 406 VLE-NPSYKENAKRLSSLFRDRP 427 (500)
T ss_dssp HHH-SHHHHHHHHHHHHTTT---
T ss_pred HHh-hhHHHHHHHHHHHHHhcCC
Confidence 999 8999999999999998764
No 24
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=2.6e-41 Score=341.39 Aligned_cols=361 Identities=20% Similarity=0.250 Sum_probs=241.5
Q ss_pred EcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCCCCC
Q 011311 10 IPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKMNPP 89 (489)
Q Consensus 10 ~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~ 89 (489)
+.+|++||++|+++||++| +++| |+|+|++++ .|.+.+. ..|++|..++.....
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L--~~~G--------h~V~~~~~~----------~~~~~v~------~~G~~~~~~~~~~~~ 54 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEEL--VARG--------HRVTYATTE----------EFAERVE------AAGAEFVLYGSALPP 54 (392)
T ss_pred CCCCccccccccHHHHHHH--HhCC--------CeEEEEeCH----------HHHHHHH------HcCCEEEecCCcCcc
Confidence 4689999999999999999 9999 669999987 5677776 568999988864321
Q ss_pred C-C--CCC-CChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHHHHHh
Q 011311 90 P-L--DYF-KSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGFVL 165 (489)
Q Consensus 90 ~-~--~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~ 165 (489)
. . +.. .+.......+.......+... .++++ ..+||+||+|.++.++..+|+++|||+|.+.+.+... .
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~--~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~---~- 127 (392)
T TIGR01426 55 PDNPPENTEEEPIDIIEKLLDEAEDVLPQL-EEAYK--GDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN---E- 127 (392)
T ss_pred ccccccccCcchHHHHHHHHHHHHHHHHHH-HHHhc--CCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc---c-
Confidence 1 1 000 122333333333333333322 22322 4689999999998899999999999999875432200 0
Q ss_pred hccccCCCCcccCcCCcccccCCCCCC-CCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHhhH--------HH
Q 011311 166 HLPTRGGEEFEESEADSADIFTYANPV-PYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELES--------HA 236 (489)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~Pgl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l~~--------~~ 236 (489)
.++ ...|.+.... ....... . ....+.+..+.+++..|+...+...+.. ..
T Consensus 128 ~~~--------------~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~ 187 (392)
T TIGR01426 128 EFE--------------EMVSPAGEGSAEEGAIAE----R--GLAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYT 187 (392)
T ss_pred ccc--------------ccccccchhhhhhhcccc----c--hhHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeC
Confidence 000 0000000000 0000000 0 0223334445555545532112111110 00
Q ss_pred HHHHhh-cC-CCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhc
Q 011311 237 VEYLMK-CD-GVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKS 314 (489)
Q Consensus 237 ~~~~~~-~~-~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~ 314 (489)
...+.. .+ +.++++++||+..... +...|+...+++++|||+|||+.......+..+++++.+.
T Consensus 188 ~~~l~~~~~~~~~~~~~~Gp~~~~~~--------------~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~ 253 (392)
T TIGR01426 188 PKAFQPAGETFDDSFTFVGPCIGDRK--------------EDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDL 253 (392)
T ss_pred ChHhCCCccccCCCeEEECCCCCCcc--------------ccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcC
Confidence 011111 01 2335999999865332 1123666656678999999998766666788899999999
Q ss_pred CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhCCc
Q 011311 315 GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVP 394 (489)
Q Consensus 315 ~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP 394 (489)
+.++||..+..... ..+ ...++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|
T Consensus 254 ~~~~i~~~g~~~~~-----------------~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P 313 (392)
T TIGR01426 254 DWHVVLSVGRGVDP-----------------ADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVP 313 (392)
T ss_pred CCeEEEEECCCCCh-----------------hHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCC
Confidence 99999998764200 011 112467888899999999999998 9999999999999999999
Q ss_pred EEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011311 395 IVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLA 466 (489)
Q Consensus 395 ~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~ 466 (489)
+|++|...||+.||+++++. |+|+.+... .+++++|.++|+++|+ +++|+++++++++.+++.
T Consensus 314 ~v~~p~~~dq~~~a~~l~~~-g~g~~l~~~-------~~~~~~l~~ai~~~l~-~~~~~~~~~~l~~~~~~~ 376 (392)
T TIGR01426 314 MVAVPQGADQPMTARRIAEL-GLGRHLPPE-------EVTAEKLREAVLAVLS-DPRYAERLRKMRAEIREA 376 (392)
T ss_pred EEecCCcccHHHHHHHHHHC-CCEEEeccc-------cCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHc
Confidence 99999999999999998775 999988754 7899999999999998 789999999999998875
No 25
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=3.7e-42 Score=358.55 Aligned_cols=397 Identities=29% Similarity=0.433 Sum_probs=246.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCC------CCC
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATA------DVS 77 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 77 (489)
+.|++++++|++||++|++.+|+.| +++| |.||++++... ........... ...
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L--~~~g--------h~vt~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 64 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRL--AERG--------HNVTVVTPSFN----------ALKLSKSSKSKSIKKINPPP 64 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHH--HHcC--------CceEEEEeech----------hcccCCcccceeeeeeecCh
Confidence 4789999999999999999999999 9999 66999987632 11110000000 000
Q ss_pred eEEEEcCCCCCCCCCCCC-ChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhC-CCeEEEec
Q 011311 78 IRFIGVPKMNPPPLDYFK-SPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELG-VPSYVFFT 155 (489)
Q Consensus 78 ~~f~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lg-iP~v~~~~ 155 (489)
+.+...++..+...+... ........+...+...+.+.+..+......++|++|+|.+..|...++.... ++..++.+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~ 144 (496)
T KOG1192|consen 65 FEFLTIPDGLPEGWEDDDLDISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPT 144 (496)
T ss_pred HHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccC
Confidence 111111111111110000 0011122333444445555444443322334999999998778887777775 99888887
Q ss_pred hhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCC--CCCCcccccCCCc--hHHHH---------HHHHhh----
Q 011311 156 SGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPY--RVLPSLCFNKHGG--FSAFE---------NFGRRF---- 218 (489)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~--~~~~~~~~~~~~~--~~~~~---------~~~~~~---- 218 (489)
..+.......+.+. .++|........ ..++......... ..... ......
T Consensus 145 ~~~~~~~~g~~~~~-------------~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (496)
T KOG1192|consen 145 SSAVLLALGLPSPL-------------SYVPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDI 211 (496)
T ss_pred chHHHHhcCCcCcc-------------cccCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCc
Confidence 77654443322211 122221110000 0000000000000 00000 000000
Q ss_pred ----hccceEEecc-hhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCC--ceEEE
Q 011311 219 ----KETKGIIVNT-FEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPAS--SVVFL 291 (489)
Q Consensus 219 ----~~~~gi~~~s-~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~vV~v 291 (489)
....+++.++ +..++......+...+..+++++|||+...... ...+.+.+|++..+.. ++|||
T Consensus 212 ~~~~~~~~~i~~~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~---------~~~~~~~~wl~~~~~~~~~vvyv 282 (496)
T KOG1192|consen 212 LNWKPTASGIIVNASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSK---------QKSPLPLEWLDILDESRHSVVYI 282 (496)
T ss_pred ccccccHHHhhhcCeEEEEccCcccCCCCCCCCCCceEECcEEecCcc---------ccccccHHHHHHHhhccCCeEEE
Confidence 1112444444 666666555444221246779999999876331 1111455666665544 89999
Q ss_pred eecCCc---CCCHHHHHHHHHHHhhc-CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHH
Q 011311 292 CFGSMG---SFGEEQIQEIASGLEKS-GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEV 367 (489)
Q Consensus 292 s~GS~~---~~~~~~~~~~~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~i 367 (489)
||||+. .++.++..+++.+|+++ +++|||+++.... ..+++++.++.++|+...+|+||.++
T Consensus 283 SfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~--------------~~~~~~~~~~~~~nV~~~~W~PQ~~l 348 (496)
T KOG1192|consen 283 SFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDS--------------IYFPEGLPNRGRGNVVLSKWAPQNDL 348 (496)
T ss_pred ECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcc--------------hhhhhcCCCCCcCceEEecCCCcHHH
Confidence 999998 79999999999999999 8999999987520 11233332222356777799999998
Q ss_pred -hccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHh
Q 011311 368 -LAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVM 446 (489)
Q Consensus 368 -L~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl 446 (489)
|.|++++|||||||||||+|++++|||||++|+++||+.||+++++.+++++... . +++.+.+.+++.+++
T Consensus 349 ll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~-~-------~~~~~~~~~~~~~il 420 (496)
T KOG1192|consen 349 LLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDK-R-------DLVSEELLEAIKEIL 420 (496)
T ss_pred hcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEeh-h-------hcCcHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999955555444 3 566656999999999
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 011311 447 DGDSEVRKRVKEVSEKARL 465 (489)
Q Consensus 447 ~~~~~~~~~a~~l~~~~~~ 465 (489)
+ +++|+++|+++++..++
T Consensus 421 ~-~~~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 421 E-NEEYKEAAKRLSEILRD 438 (496)
T ss_pred c-ChHHHHHHHHHHHHHHc
Confidence 8 89999999999998773
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=4.1e-41 Score=341.34 Aligned_cols=367 Identities=16% Similarity=0.125 Sum_probs=235.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKM 86 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~ 86 (489)
|+|+++|+.||++|+++||++| ++|| |+|+|++++ .+.+.+. ..|++|++++..
T Consensus 3 Il~~~~p~~GHv~P~l~la~~L--~~rG--------h~V~~~t~~----------~~~~~v~------~~G~~~~~~~~~ 56 (401)
T cd03784 3 VLITTIGSRGDVQPLVALAWAL--RAAG--------HEVRVATPP----------EFADLVE------AAGLEFVPVGGD 56 (401)
T ss_pred EEEEeCCCcchHHHHHHHHHHH--HHCC--------CeEEEeeCH----------hHHHHHH------HcCCceeeCCCC
Confidence 9999999999999999999999 9999 669999987 4466665 568999988764
Q ss_pred CCCCCCC--------CCChHHHHHHHHHHhhHHHHHHHHHHHhc-CCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechh
Q 011311 87 NPPPLDY--------FKSPEKFITEYVDSHKDCIKEAIIEHVLN-NNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSG 157 (489)
Q Consensus 87 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~ 157 (489)
....... ...... ...............+.++.+. ...++|+||+|.++.++..+|+++|||++.+++++
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~ 135 (401)
T cd03784 57 PDELLASPERNAGLLLLGPGL-LLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGP 135 (401)
T ss_pred HHHHHhhhhhcccccccchHH-HHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeeccc
Confidence 3110000 001111 1111222222223333333221 24689999999988899999999999999987765
Q ss_pred HHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCC-CCcccccCCCchHHHHHHHHhhhccceEEecch-----hH
Q 011311 158 AAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRV-LPSLCFNKHGGFSAFENFGRRFKETKGIIVNTF-----EE 231 (489)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~-----~~ 231 (489)
....+ ...| +..+.. ..........+........+..++..|+...+. ..
T Consensus 136 ~~~~~--------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~ 191 (401)
T cd03784 136 DTPTS--------------------AFPP----PLGRANLRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVP 191 (401)
T ss_pred CCccc--------------------cCCC----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCc
Confidence 31100 0000 000000 000000000001112223333444444321110 00
Q ss_pred hhHHHHHHHhh-cCCCC-CEEEec-ccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCH-HHHHHH
Q 011311 232 LESHAVEYLMK-CDGVP-PVYNVG-PMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGE-EQIQEI 307 (489)
Q Consensus 232 l~~~~~~~~~~-~~~~p-~~~~vG-p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~-~~~~~~ 307 (489)
........+.. ....+ ....+| ++..... ....++++..|++. .+++|||+|||+..... ..+..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~ 261 (401)
T cd03784 192 ELYGFSPAVLPPPPDWPRFDLVTGYGFRDVPY--------NGPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLD 261 (401)
T ss_pred EEEecCcccCCCCCCccccCcEeCCCCCCCCC--------CCCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHH
Confidence 00000000000 01222 355565 3322221 12456778889876 35799999999876444 457779
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHH
Q 011311 308 ASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILE 387 (489)
Q Consensus 308 ~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~e 387 (489)
++++...+.++||.++..... . ...++|+++.+|+||.++|+|+++ ||||||+||++|
T Consensus 262 ~~a~~~~~~~~i~~~g~~~~~-----------------~---~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~e 319 (401)
T cd03784 262 VEAVATLGQRAILSLGWGGLG-----------------A---EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAA 319 (401)
T ss_pred HHHHHHcCCeEEEEccCcccc-----------------c---cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHH
Confidence 999999999999999865210 0 123478899999999999999999 999999999999
Q ss_pred HHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011311 388 SVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLA 466 (489)
Q Consensus 388 al~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~ 466 (489)
++++|||+|++|+..||+.||+++++. |+|+.+... .+++++|.++|+++++ + .++++++++++.+++.
T Consensus 320 al~~GvP~v~~P~~~dQ~~~a~~~~~~-G~g~~l~~~-------~~~~~~l~~al~~~l~-~-~~~~~~~~~~~~~~~~ 388 (401)
T cd03784 320 ALRAGVPQLVVPFFGDQPFWAARVAEL-GAGPALDPR-------ELTAERLAAALRRLLD-P-PSRRRAAALLRRIREE 388 (401)
T ss_pred HHHcCCCEEeeCCCCCcHHHHHHHHHC-CCCCCCCcc-------cCCHHHHHHHHHHHhC-H-HHHHHHHHHHHHHHhc
Confidence 999999999999999999999998776 999988764 6899999999999998 4 4666777777777543
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=310.30 Aligned_cols=383 Identities=20% Similarity=0.268 Sum_probs=234.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPK 85 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~ 85 (489)
+|+++..|+.||++|+++||++| .++| |+|+|+++. .|.+.++ ..|+.|...+.
T Consensus 3 kil~~~~~~~Ghv~p~~aL~~eL--~~~g--------heV~~~~~~----------~~~~~ve------~ag~~f~~~~~ 56 (406)
T COG1819 3 KILFVVCGAYGHVNPCLALGKEL--RRRG--------HEVVFASTG----------KFKEFVE------AAGLAFVAYPI 56 (406)
T ss_pred eEEEEeccccccccchHHHHHHH--HhcC--------CeEEEEeCH----------HHHHHHH------HhCcceeeccc
Confidence 59999999999999999999999 9999 669999877 6788887 55667776664
Q ss_pred CCC-CCC-CCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHHHH
Q 011311 86 MNP-PPL-DYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGF 163 (489)
Q Consensus 86 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 163 (489)
... ... +...+....+............+.++-+.+ ..+|+++.|...+.. .+++.+++|++........
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---- 128 (406)
T COG1819 57 RDSELATEDGKFAGVKSFRRLLQQFKKLIRELLELLRE---LEPDLVVDDARLSLG-LAARLLGIPVVGINVAPYT---- 128 (406)
T ss_pred cCChhhhhhhhhhccchhHHHhhhhhhhhHHHHHHHHh---cchhhhhcchhhhhh-hhhhhcccchhhhhhhhcc----
Confidence 321 111 111111111111122222233333333332 478888877665544 7888889998765433211
Q ss_pred HhhccccCCCC--cccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccce--EEecchhH-------h
Q 011311 164 VLHLPTRGGEE--FEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKG--IIVNTFEE-------L 232 (489)
Q Consensus 164 ~~~~~~~~~~~--~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--i~~~s~~~-------l 232 (489)
.++...... .... . .+ +.+...++........ ...........+...+ +..+.+.. +
T Consensus 129 --~~~~~~~~~~~~~~~-~------~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 196 (406)
T COG1819 129 --PLPAAGLPLPPVGIA-G------KL--PIPLYPLPPRLVRPLI-FARSWLPKLVVRRNLGLELGLPNIRRLFASGPLL 196 (406)
T ss_pred --CCcccccCccccccc-c------cc--cccccccChhhccccc-cchhhhhhhhhhhhccccccccchHHHhcCCCCc
Confidence 011000000 0000 0 00 0111111111111000 0011111111111111 11111110 0
Q ss_pred hHHHHHHHhhc-CCCCC-EEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHH
Q 011311 233 ESHAVEYLMKC-DGVPP-VYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASG 310 (489)
Q Consensus 233 ~~~~~~~~~~~-~~~p~-~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a 310 (489)
+....+....+ ...|. ..++||+..... .++..|... ++++||+||||.... .+.+..++++
T Consensus 197 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------------~~~~~~~~~--d~~~vyvslGt~~~~-~~l~~~~~~a 260 (406)
T COG1819 197 EIAYTDVLFPPGDRLPFIGPYIGPLLGEAA-------------NELPYWIPA--DRPIVYVSLGTVGNA-VELLAIVLEA 260 (406)
T ss_pred cccccccccCCCCCCCCCcCcccccccccc-------------ccCcchhcC--CCCeEEEEcCCcccH-HHHHHHHHHH
Confidence 00000000000 01121 344555443222 223334333 468999999998866 7788899999
Q ss_pred HhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHH
Q 011311 311 LEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVW 390 (489)
Q Consensus 311 l~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~ 390 (489)
+..++.+||..++... .. .. ..++|+++.+|+||.++|+++++ ||||||+|||+|||+
T Consensus 261 ~~~l~~~vi~~~~~~~-~~-----------~~--------~~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~ 318 (406)
T COG1819 261 LADLDVRVIVSLGGAR-DT-----------LV--------NVPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALY 318 (406)
T ss_pred HhcCCcEEEEeccccc-cc-----------cc--------cCCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHH
Confidence 9999999999997631 00 01 23478899999999999999999 999999999999999
Q ss_pred hCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcC
Q 011311 391 FGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDG 470 (489)
Q Consensus 391 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~ 470 (489)
+|||+|++|...||+.||+|+++. |+|+.+..+ .++++.|+++|+++|+ ++.|+++++++++++++. +
T Consensus 319 ~gvP~vv~P~~~DQ~~nA~rve~~-G~G~~l~~~-------~l~~~~l~~av~~vL~-~~~~~~~~~~~~~~~~~~---~ 386 (406)
T COG1819 319 AGVPLVVIPDGADQPLNAERVEEL-GAGIALPFE-------ELTEERLRAAVNEVLA-DDSYRRAAERLAEEFKEE---D 386 (406)
T ss_pred cCCCEEEecCCcchhHHHHHHHHc-CCceecCcc-------cCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhhc---c
Confidence 999999999999999999998665 999999876 8999999999999999 899999999999999987 5
Q ss_pred CChHHHHHHHHHHHhh
Q 011311 471 GSSYAATGRLIEDLFG 486 (489)
Q Consensus 471 g~~~~~~~~~~~~~~~ 486 (489)
| .+.+.+.|.++.+
T Consensus 387 g--~~~~a~~le~~~~ 400 (406)
T COG1819 387 G--PAKAADLLEEFAR 400 (406)
T ss_pred c--HHHHHHHHHHHHh
Confidence 5 3555555555443
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.94 E-value=2.6e-24 Score=212.58 Aligned_cols=325 Identities=18% Similarity=0.169 Sum_probs=200.2
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|| +|++...++-||++|.+++|++| .++| |+|.|++.... ....+ ....++.|
T Consensus 1 ~~---~i~~~~GGTGGHi~Pala~a~~l--~~~g--------~~v~~vg~~~~---------~e~~l-----~~~~g~~~ 53 (352)
T PRK12446 1 MK---KIVFTGGGSAGHVTPNLAIIPYL--KEDN--------WDISYIGSHQG---------IEKTI-----IEKENIPY 53 (352)
T ss_pred CC---eEEEEcCCcHHHHHHHHHHHHHH--HhCC--------CEEEEEECCCc---------ccccc-----CcccCCcE
Confidence 67 79999999999999999999999 9999 67999986633 11111 11346888
Q ss_pred EEcCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCC--chHHHHHHHhCCCeEEEechhH
Q 011311 81 IGVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFC--SSMIDTANELGVPSYVFFTSGA 158 (489)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~--~~~~~vA~~lgiP~v~~~~~~~ 158 (489)
+.++....... .....+........ .+-..+. +++ ..+||+||+.--+ .++..+|..+++|+++...
T Consensus 54 ~~~~~~~l~~~----~~~~~~~~~~~~~~-~~~~~~~-i~~--~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~--- 122 (352)
T PRK12446 54 YSISSGKLRRY----FDLKNIKDPFLVMK-GVMDAYV-RIR--KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHES--- 122 (352)
T ss_pred EEEeccCcCCC----chHHHHHHHHHHHH-HHHHHHH-HHH--hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECC---
Confidence 77763211110 11111222221111 1111111 222 4699999975533 3567889999999876532
Q ss_pred HHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHhhHHHHH
Q 011311 159 AFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAVE 238 (489)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~~ 238 (489)
..+|++.+. .+......+..+|++...
T Consensus 123 ------------------------n~~~g~~nr-------------------------~~~~~a~~v~~~f~~~~~---- 149 (352)
T PRK12446 123 ------------------------DMTPGLANK-------------------------IALRFASKIFVTFEEAAK---- 149 (352)
T ss_pred ------------------------CCCccHHHH-------------------------HHHHhhCEEEEEccchhh----
Confidence 123443221 011111223344433221
Q ss_pred HHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHH-HHHHHHHHhhcCCe
Q 011311 239 YLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQ-IQEIASGLEKSGVR 317 (489)
Q Consensus 239 ~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~-~~~~~~al~~~~~~ 317 (489)
.+. ..+++++|+-+...-. ....+...+.+.-.+++++|+|..||+.....++ +.+++..+.. +.+
T Consensus 150 ~~~----~~k~~~tG~Pvr~~~~--------~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~ 216 (352)
T PRK12446 150 HLP----KEKVIYTGSPVREEVL--------KGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQ 216 (352)
T ss_pred hCC----CCCeEEECCcCCcccc--------cccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcE
Confidence 111 1247889954433210 1111222223333345689999999988655544 4445555532 489
Q ss_pred EEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCcccccc-CH-HHHhccCCcceEEecCCchhHHHHHHhCCcE
Q 011311 318 FLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWA-PQ-KEVLAHSAIGGFVSHCGWNSILESVWFGVPI 395 (489)
Q Consensus 318 ~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~-pq-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~ 395 (489)
++|.+|... ++. .. .. ..+..+..|+ ++ .+++.++++ +|||||.+|+.|++++|+|+
T Consensus 217 vv~~~G~~~----------~~~-------~~-~~-~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~ 275 (352)
T PRK12446 217 IVHLCGKGN----------LDD-------SL-QN-KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPM 275 (352)
T ss_pred EEEEeCCch----------HHH-------HH-hh-cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCE
Confidence 999998651 000 00 00 1233445776 43 469999998 99999999999999999999
Q ss_pred EeccCc-----chhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHH
Q 011311 396 VTWPIY-----AEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKE 458 (489)
Q Consensus 396 v~~P~~-----~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~ 458 (489)
|++|+. .||..||+.+++. |+|..+... +++++.|.+++.+++++.+.|++++++
T Consensus 276 I~iP~~~~~~~~~Q~~Na~~l~~~-g~~~~l~~~-------~~~~~~l~~~l~~ll~~~~~~~~~~~~ 335 (352)
T PRK12446 276 LLIPLSKFASRGDQILNAESFERQ-GYASVLYEE-------DVTVNSLIKHVEELSHNNEKYKTALKK 335 (352)
T ss_pred EEEcCCCCCCCchHHHHHHHHHHC-CCEEEcchh-------cCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 999985 5899999999887 999988754 899999999999999833466655544
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=8.6e-21 Score=185.37 Aligned_cols=322 Identities=18% Similarity=0.233 Sum_probs=198.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKM 86 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~ 86 (489)
|++...++-||+.|.++|+++| .++| ++ +|.++.+... .+... ....++.|+.++..
T Consensus 3 ivl~~gGTGGHv~pAlAl~~~l--~~~g------~~-~v~~~~~~~~----------~e~~l----~~~~~~~~~~I~~~ 59 (357)
T COG0707 3 IVLTAGGTGGHVFPALALAEEL--AKRG------WE-QVIVLGTGDG----------LEAFL----VKQYGIEFELIPSG 59 (357)
T ss_pred EEEEeCCCccchhHHHHHHHHH--HhhC------cc-EEEEeccccc----------ceeee----ccccCceEEEEecc
Confidence 9999999999999999999999 9999 32 5777754421 33222 22347888888765
Q ss_pred CCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEe--CCCCchHHHHHHHhCCCeEEEechhHHHHHHH
Q 011311 87 NPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVL--DFFCSSMIDTANELGVPSYVFFTSGAAFLGFV 164 (489)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~--D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 164 (489)
.....-.... +........ .+.+. ..+++ ..+||+||. .+.+.++..+|..+|||.++.-.
T Consensus 60 ~~~~~~~~~~----~~~~~~~~~-~~~~a-~~il~--~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEq--------- 122 (357)
T COG0707 60 GLRRKGSLKL----LKAPFKLLK-GVLQA-RKILK--KLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQ--------- 122 (357)
T ss_pred cccccCcHHH----HHHHHHHHH-HHHHH-HHHHH--HcCCCEEEecCCccccHHHHHHHhCCCCEEEEec---------
Confidence 4332211111 111111111 11111 22222 359999997 44445677888899999876532
Q ss_pred hhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHhhHHHHHHHhhcC
Q 011311 165 LHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAVEYLMKCD 244 (489)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~~~~~~~~ 244 (489)
..+||+.+.+. ......+..+|++.+.
T Consensus 123 ------------------n~~~G~ank~~-------------------------~~~a~~V~~~f~~~~~---------- 149 (357)
T COG0707 123 ------------------NAVPGLANKIL-------------------------SKFAKKVASAFPKLEA---------- 149 (357)
T ss_pred ------------------CCCcchhHHHh-------------------------HHhhceeeeccccccc----------
Confidence 33555542110 0011112233333111
Q ss_pred CCC--CEEEec-ccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHH-HHHHHHHHhhcCCeEEE
Q 011311 245 GVP--PVYNVG-PMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQ-IQEIASGLEKSGVRFLW 320 (489)
Q Consensus 245 ~~p--~~~~vG-p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~-~~~~~~al~~~~~~~vw 320 (489)
..+ +++.+| |+...-. ..+..-..+.... ++++|+|..||+....-++ +.+++..+.+ +..+++
T Consensus 150 ~~~~~~~~~tG~Pvr~~~~----------~~~~~~~~~~~~~-~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~ 217 (357)
T COG0707 150 GVKPENVVVTGIPVRPEFE----------ELPAAEVRKDGRL-DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIH 217 (357)
T ss_pred cCCCCceEEecCcccHHhh----------ccchhhhhhhccC-CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEE
Confidence 222 378888 3322111 1112222222111 4679999999988655544 4445555545 688888
Q ss_pred EecCCCCCCCCCCCCCcccccccCChhhHhhhc-CC-CccccccCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEe
Q 011311 321 SLRKTPPKDRPEMPGEYTCVEDILPRGFQERSK-GR-GMICGWAPQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVT 397 (489)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~-~~v~~w~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~ 397 (489)
.+|... ++ ....... .+ +.+.+|..++ ++++.+++ +||++|.+|+.|.+++|+|+|.
T Consensus 218 ~~G~~~----------~~--------~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~Il 277 (357)
T COG0707 218 QTGKND----------LE--------ELKSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAIL 277 (357)
T ss_pred EcCcch----------HH--------HHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEE
Confidence 888651 11 1111111 12 4555888765 59999999 9999999999999999999999
Q ss_pred ccCc----chhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011311 398 WPIY----AEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARL 465 (489)
Q Consensus 398 ~P~~----~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~ 465 (489)
+|+. .||..||+.+++. |.|..++.. ++|.+++.+.|.++++ ++ ++.+++++..++
T Consensus 278 iP~p~~~~~~Q~~NA~~l~~~-gaa~~i~~~-------~lt~~~l~~~i~~l~~-~~---~~l~~m~~~a~~ 337 (357)
T COG0707 278 VPYPPGADGHQEYNAKFLEKA-GAALVIRQS-------ELTPEKLAELILRLLS-NP---EKLKAMAENAKK 337 (357)
T ss_pred eCCCCCccchHHHHHHHHHhC-CCEEEeccc-------cCCHHHHHHHHHHHhc-CH---HHHHHHHHHHHh
Confidence 9983 4899999999988 999999865 8999999999999998 42 334444444444
No 30
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.87 E-value=3.1e-20 Score=182.36 Aligned_cols=304 Identities=17% Similarity=0.191 Sum_probs=178.8
Q ss_pred EEEEcCC-CccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCC
Q 011311 7 LVFIPSP-SVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPK 85 (489)
Q Consensus 7 i~~~~~~-~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~ 85 (489)
|++...+ +.||+...++||++| + | |+|+|++.... .+.+. . .+....++.
T Consensus 3 Il~~v~~~G~GH~~R~~~la~~L--r--g--------~~v~~~~~~~~----------~~~~~------~-~~~~~~~~~ 53 (318)
T PF13528_consen 3 ILFYVQGHGLGHASRCLALARAL--R--G--------HEVTFITSGPA----------PEFLK------P-RFPVREIPG 53 (318)
T ss_pred EEEEeCCCCcCHHHHHHHHHHHH--c--c--------CceEEEEcCCc----------HHHhc------c-ccCEEEccC
Confidence 8888877 999999999999999 5 8 66999987622 22221 1 134455543
Q ss_pred CCCCCCCCCCChHHHHHHHH---HHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHHH
Q 011311 86 MNPPPLDYFKSPEKFITEYV---DSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLG 162 (489)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 162 (489)
..........+....+.... ......++..++.+ + ..+||+||+|. .+.+..+|+..|+|++.+......
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~--~~~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~--- 126 (318)
T PF13528_consen 54 LGPIQENGRLDRWKTVRNNIRWLARLARRIRREIRWL-R--EFRPDLVISDF-YPLAALAARRAGIPVIVISNQYWF--- 126 (318)
T ss_pred ceEeccCCccchHHHHHHHHHhhHHHHHHHHHHHHHH-H--hcCCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHc---
Confidence 32111111111111111111 11223333333323 3 36899999995 444678899999999887655430
Q ss_pred HHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHh--hhccceEEecchhHhhHHHHHHH
Q 011311 163 FVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRR--FKETKGIIVNTFEELESHAVEYL 240 (489)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~gi~~~s~~~l~~~~~~~~ 240 (489)
..+... ++... .....+.+.... .......+.-++. ...
T Consensus 127 ---------------------~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~------ 167 (318)
T PF13528_consen 127 ---------------------LHPNFW--LPWDQ---------DFGRLIERYIDRYHFPPADRRLALSFY-PPL------ 167 (318)
T ss_pred ---------------------ccccCC--cchhh---------hHHHHHHHhhhhccCCcccceecCCcc-ccc------
Confidence 001110 00000 000111111111 1111122222222 110
Q ss_pred hhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcC-CeEE
Q 011311 241 MKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSG-VRFL 319 (489)
Q Consensus 241 ~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~-~~~v 319 (489)
....++.++||+...... ..+ ..+++.|+|+||..... .++++++..+ ..++
T Consensus 168 ---~~~~~~~~~~p~~~~~~~---------~~~---------~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~ 220 (318)
T PF13528_consen 168 ---PPFFRVPFVGPIIRPEIR---------ELP---------PEDEPKILVYFGGGGPG------DLIEALKALPDYQFI 220 (318)
T ss_pred ---cccccccccCchhccccc---------ccC---------CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEE
Confidence 011225567877653321 000 11346899999885422 5566676665 6666
Q ss_pred EEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCcccccc--CHHHHhccCCcceEEecCCchhHHHHHHhCCcEEe
Q 011311 320 WSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWA--PQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVT 397 (489)
Q Consensus 320 w~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~--pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~ 397 (489)
+. |.... . ...+|+.+..|. .-.++|..+++ +|||||+||++|++++|+|+|+
T Consensus 221 v~-g~~~~----------------~------~~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ 275 (318)
T PF13528_consen 221 VF-GPNAA----------------D------PRPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALV 275 (318)
T ss_pred EE-cCCcc----------------c------ccCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEE
Confidence 65 54310 0 113677777765 34569999998 9999999999999999999999
Q ss_pred ccC--cchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHH
Q 011311 398 WPI--YAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCV 445 (489)
Q Consensus 398 ~P~--~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~v 445 (489)
+|. +.+|..||+++.+. |+|+.+... +++++.|+++|+++
T Consensus 276 ip~~~~~EQ~~~a~~l~~~-G~~~~~~~~-------~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 276 IPRPGQDEQEYNARKLEEL-GLGIVLSQE-------DLTPERLAEFLERL 317 (318)
T ss_pred EeCCCCchHHHHHHHHHHC-CCeEEcccc-------cCCHHHHHHHHhcC
Confidence 999 78999999998665 999999765 89999999999764
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.84 E-value=4.3e-19 Score=174.11 Aligned_cols=85 Identities=21% Similarity=0.305 Sum_probs=70.1
Q ss_pred CCCccccccC--HHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcc--hhhHHHHHHHHhhCeEEEeeeccccCC
Q 011311 354 GRGMICGWAP--QKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYA--EQQINAFQMVRDLGLAVELRLDYRRGT 429 (489)
Q Consensus 354 ~~~~v~~w~p--q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~ 429 (489)
+|+.+.+|.| ..+.|+.+++ +|||||++|++|++++|+|+|++|..+ ||..||+.+++. |+|+.+...
T Consensus 229 ~~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~~----- 300 (321)
T TIGR00661 229 ENVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEYK----- 300 (321)
T ss_pred CCEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcChh-----
Confidence 6777889997 4568899998 999999999999999999999999965 899999999877 999988654
Q ss_pred CCccCHHHHHHHHHHHhcCCHHH
Q 011311 430 ENHVMADELARAVGCVMDGDSEV 452 (489)
Q Consensus 430 ~~~~~~~~l~~ai~~vl~~~~~~ 452 (489)
++ ++.+++.++++ ++.|
T Consensus 301 --~~---~~~~~~~~~~~-~~~~ 317 (321)
T TIGR00661 301 --EL---RLLEAILDIRN-MKRY 317 (321)
T ss_pred --hH---HHHHHHHhccc-cccc
Confidence 34 56666667776 4444
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.75 E-value=1.6e-15 Score=151.46 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=92.4
Q ss_pred CccccccC-HHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccC----cchhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 356 GMICGWAP-QKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPI----YAEQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 356 ~~v~~w~p-q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
+.+.+|+. ..++|+.+++ +|+|+|.++++||+++|+|+|++|. .+||..|+..+.+. |.|+.+..+
T Consensus 237 v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~~~~------ 307 (357)
T PRK00726 237 AEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLIPQS------ 307 (357)
T ss_pred EEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEEEcc------
Confidence 56678884 4679999999 9999999999999999999999997 47899999998887 999998765
Q ss_pred CccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 431 NHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
+++++.|+++|+++++ ++.++++..+-+++ ..+.++..+.++.+.+.++
T Consensus 308 -~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 308 -DLTPEKLAEKLLELLS-DPERLEAMAEAARA----LGKPDAAERLADLIEELAR 356 (357)
T ss_pred -cCCHHHHHHHHHHHHc-CHHHHHHHHHHHHh----cCCcCHHHHHHHHHHHHhh
Confidence 6789999999999998 67776655554433 2445666667766666554
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.72 E-value=4e-15 Score=148.11 Aligned_cols=321 Identities=15% Similarity=0.136 Sum_probs=182.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKM 86 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~ 86 (489)
|++...+.-||+...+.|++.| .++| |+|++++.... ...+... ..++++..++..
T Consensus 2 ~~~~~~~~gG~~~~~~~la~~l--~~~G--------~ev~v~~~~~~--------~~~~~~~------~~~~~~~~~~~~ 57 (350)
T cd03785 2 ILIAGGGTGGHIFPALALAEEL--RERG--------AEVLFLGTKRG--------LEARLVP------KAGIPLHTIPVG 57 (350)
T ss_pred EEEEecCchhhhhHHHHHHHHH--HhCC--------CEEEEEECCCc--------chhhccc------ccCCceEEEEec
Confidence 8899999999999999999999 9999 66999986522 0011111 235666666542
Q ss_pred CCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCC--CchHHHHHHHhCCCeEEEechhHHHHHHH
Q 011311 87 NPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFF--CSSMIDTANELGVPSYVFFTSGAAFLGFV 164 (489)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~--~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 164 (489)
..... .....+..+.... ..+.. +.++++ ..+||+|+++.. ..++..+|...++|++... ..
T Consensus 58 ~~~~~----~~~~~~~~~~~~~-~~~~~-~~~~i~--~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~-~~------- 121 (350)
T cd03785 58 GLRRK----GSLKKLKAPFKLL-KGVLQ-ARKILK--KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHE-QN------- 121 (350)
T ss_pred CcCCC----ChHHHHHHHHHHH-HHHHH-HHHHHH--hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEc-CC-------
Confidence 11111 1111111111111 11111 223333 358999997642 3345667888899987531 10
Q ss_pred hhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHhhHHHHHHHhhcC
Q 011311 165 LHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAVEYLMKCD 244 (489)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~~~~~~~~ 244 (489)
..|++ ...+ ..+..+.++..+-...+. +
T Consensus 122 -------------------~~~~~-------------------~~~~-----~~~~~~~vi~~s~~~~~~-----~---- 149 (350)
T cd03785 122 -------------------AVPGL-------------------ANRL-----LARFADRVALSFPETAKY-----F---- 149 (350)
T ss_pred -------------------CCccH-------------------HHHH-----HHHhhCEEEEcchhhhhc-----C----
Confidence 00110 0000 011234454443222221 1
Q ss_pred CCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCH-HHHHHHHHHHhhcCCeEEEEec
Q 011311 245 GVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGE-EQIQEIASGLEKSGVRFLWSLR 323 (489)
Q Consensus 245 ~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~-~~~~~~~~al~~~~~~~vw~~~ 323 (489)
...++.++|..+..... .. .+. ...+...+++++|++..|+...... +.+.+++..+.+.+..+++.+|
T Consensus 150 ~~~~~~~i~n~v~~~~~--------~~-~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G 219 (350)
T cd03785 150 PKDKAVVTGNPVREEIL--------AL-DRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTG 219 (350)
T ss_pred CCCcEEEECCCCchHHh--------hh-hhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcC
Confidence 11347778854432210 01 111 2223322344566666666432211 1233444445444556666766
Q ss_pred CCCCCCCCCCCCCcccccccCChhhHhhhcCCCcccccc-CHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccC--
Q 011311 324 KTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWA-PQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPI-- 400 (489)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~-pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~-- 400 (489)
... .++ +.+...+ ..+|+.+.+|+ ...++|+.+++ +|+++|.+++.||+++|+|+|+.|.
T Consensus 220 ~g~----------~~~----l~~~~~~-~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~ 282 (350)
T cd03785 220 KGD----------LEE----VKKAYEE-LGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPY 282 (350)
T ss_pred Ccc----------HHH----HHHHHhc-cCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCC
Confidence 541 111 1111111 13577888888 45679999999 9999999999999999999999986
Q ss_pred --cchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 401 --YAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 401 --~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
..+|..|+..+++. |.|+.+... ..+.+++.++|+++++ ++..+++
T Consensus 283 ~~~~~~~~~~~~l~~~-g~g~~v~~~-------~~~~~~l~~~i~~ll~-~~~~~~~ 330 (350)
T cd03785 283 AADDHQTANARALVKA-GAAVLIPQE-------ELTPERLAAALLELLS-DPERLKA 330 (350)
T ss_pred CCCCcHHHhHHHHHhC-CCEEEEecC-------CCCHHHHHHHHHHHhc-CHHHHHH
Confidence 46799999998887 999988743 4689999999999998 6655444
No 34
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.68 E-value=6.4e-15 Score=147.79 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=86.9
Q ss_pred HHHHhccCCcceEEecCCchhHHHHHHhCCcEEec----cCcc---------hhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 364 QKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW----PIYA---------EQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 364 q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~----P~~~---------DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
..+++..+++ +|+-+|..|+ |++++|+|+|++ |+.. +|..|+..++++ ++...+...
T Consensus 261 ~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~q~------ 330 (385)
T TIGR00215 261 ARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELLQE------ 330 (385)
T ss_pred HHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhcCC------
Confidence 4569999999 9999999887 999999999999 7631 278899888877 888877644
Q ss_pred CccCHHHHHHHHHHHhcCCH----HHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 011311 431 NHVMADELARAVGCVMDGDS----EVRKRVKEVSEKARLALRDGGSSYAATGRLI 481 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~----~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 481 (489)
.+|++.|.+.+.++++ |+ +++++.++--+++++.++++|++.+..+.++
T Consensus 331 -~~~~~~l~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 331 -ECTPHPLAIALLLLLE-NGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVL 383 (385)
T ss_pred -CCCHHHHHHHHHHHhc-CCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 8999999999999998 67 7777777777777777888788877665544
No 35
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.61 E-value=6.8e-13 Score=131.93 Aligned_cols=82 Identities=20% Similarity=0.230 Sum_probs=68.8
Q ss_pred CHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCc---chhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHH
Q 011311 363 PQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIY---AEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 363 pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
+-.++|+.+++ +|+++|.++++||+++|+|+|+.|.. .+|..|+..+.+. |.|..++.. +.+.++|+
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~~-------~~~~~~l~ 312 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQK-------ELLPEKLL 312 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEecc-------cCCHHHHH
Confidence 45679999999 99999988999999999999999863 5788899888775 999887654 56899999
Q ss_pred HHHHHHhcCCHHHHHH
Q 011311 440 RAVGCVMDGDSEVRKR 455 (489)
Q Consensus 440 ~ai~~vl~~~~~~~~~ 455 (489)
++|+++++ |++.+++
T Consensus 313 ~~i~~ll~-~~~~~~~ 327 (348)
T TIGR01133 313 EALLKLLL-DPANLEA 327 (348)
T ss_pred HHHHHHHc-CHHHHHH
Confidence 99999998 6655543
No 36
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.55 E-value=1e-12 Score=132.44 Aligned_cols=109 Identities=21% Similarity=0.181 Sum_probs=71.9
Q ss_pred HHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhh-HHH------------HHHHHhhCeEEEeeeccccCCCC
Q 011311 365 KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQ-INA------------FQMVRDLGLAVELRLDYRRGTEN 431 (489)
Q Consensus 365 ~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~-~na------------~~v~~~~G~G~~l~~~~~~~~~~ 431 (489)
..+++.+++ +|+.+|.+++ |++++|+|+|+.|-..--+ ..+ ..+++. +++..+...
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~------- 324 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-ELVPELLQE------- 324 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-CcchhhcCC-------
Confidence 569999999 9999998877 9999999999985432222 111 122122 223323222
Q ss_pred ccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 432 HVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 432 ~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
..++++|++++.++++ |++.+++..+-.+.+++.. ..|++.+.++.+.+.+.+
T Consensus 325 ~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~~~ 377 (380)
T PRK00025 325 EATPEKLARALLPLLA-DGARRQALLEGFTELHQQL-RCGADERAAQAVLELLKQ 377 (380)
T ss_pred CCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHhhh
Confidence 6789999999999998 6766655555544455544 456777777766665543
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.54 E-value=3e-12 Score=128.98 Aligned_cols=167 Identities=16% Similarity=0.276 Sum_probs=110.2
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHhhc-CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccC
Q 011311 285 ASSVVFLCFGSMGSFGEEQIQEIASGLEKS-GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAP 363 (489)
Q Consensus 285 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~p 363 (489)
++++|++..|+.... ..+..+++++.+. +.++++..|.+. ...+.+ .......++++.+.+|++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~------------~~~~~l-~~~~~~~~~~v~~~g~~~ 265 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE------------ALKQSL-EDLQETNPDALKVFGYVE 265 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH------------HHHHHH-HHHHhcCCCcEEEEechh
Confidence 456777777876532 2356677777653 567777766431 000001 011111224678889998
Q ss_pred HH-HHhccCCcceEEecCCchhHHHHHHhCCcEEec-cCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHH
Q 011311 364 QK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW-PIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARA 441 (489)
Q Consensus 364 q~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~a 441 (489)
+. +++..+++ +|+..|..|+.||+++|+|+|+. |..+.|..|+..+.+. |.|+.. -+.+++.++
T Consensus 266 ~~~~l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~-----------~~~~~l~~~ 331 (380)
T PRK13609 266 NIDELFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVI-----------RDDEEVFAK 331 (380)
T ss_pred hHHHHHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEE-----------CCHHHHHHH
Confidence 75 69999998 99999988999999999999995 6777788999887665 888753 267899999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 442 VGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 442 i~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
|.++++ |++.+++ +++..++ .....+....++.+++.+.
T Consensus 332 i~~ll~-~~~~~~~---m~~~~~~-~~~~~s~~~i~~~i~~~~~ 370 (380)
T PRK13609 332 TEALLQ-DDMKLLQ---MKEAMKS-LYLPEPADHIVDDILAENH 370 (380)
T ss_pred HHHHHC-CHHHHHH---HHHHHHH-hCCCchHHHHHHHHHHhhh
Confidence 999998 6655443 3333333 2334566666666655443
No 38
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.48 E-value=5.1e-12 Score=121.06 Aligned_cols=103 Identities=16% Similarity=0.226 Sum_probs=76.8
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhhc--CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHh--hhcCCCcccccc
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEKS--GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQE--RSKGRGMICGWA 362 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~~--~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~v~~w~ 362 (489)
+.|+|+||..- .......++++|.+. +.++.+++|.... ..+.+.. ...+|+.+..++
T Consensus 171 ~~iLi~~GG~d--~~~~~~~~l~~l~~~~~~~~i~vv~G~~~~----------------~~~~l~~~~~~~~~i~~~~~~ 232 (279)
T TIGR03590 171 RRVLVSFGGAD--PDNLTLKLLSALAESQINISITLVTGSSNP----------------NLDELKKFAKEYPNIILFIDV 232 (279)
T ss_pred CeEEEEeCCcC--CcCHHHHHHHHHhccccCceEEEEECCCCc----------------CHHHHHHHHHhCCCEEEEeCH
Confidence 57899998643 233445677777653 5678888886520 1112211 123577778999
Q ss_pred CHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHH
Q 011311 363 PQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQ 410 (489)
Q Consensus 363 pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 410 (489)
++. +++..+++ +||+|| +|+.|+++.|+|+|++|+..+|..||+.
T Consensus 233 ~~m~~lm~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 233 ENMAELMNEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HHHHHHHHHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 986 69999999 999999 9999999999999999999999999965
No 39
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.48 E-value=5.4e-15 Score=130.85 Aligned_cols=137 Identities=21% Similarity=0.347 Sum_probs=95.8
Q ss_pred eEEEeecCCcCCCHHH-HHHHHHHHhh--cCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccC-
Q 011311 288 VVFLCFGSMGSFGEEQ-IQEIASGLEK--SGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAP- 363 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~-~~~~~~al~~--~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~p- 363 (489)
+|+|+.||.....-.. +..++..+.. ....+++.+|... ++.. ... +. ....++.+.+|.+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~----------~~~~---~~~-~~-~~~~~v~~~~~~~~ 65 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNN----------YEEL---KIK-VE-NFNPNVKVFGFVDN 65 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCE----------CHHH---CCC-HC-CTTCCCEEECSSSS
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCc----------HHHH---HHH-Hh-ccCCcEEEEechhh
Confidence 4899999865321211 2234444433 3578999988752 1110 111 10 1115677889999
Q ss_pred HHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcc----hhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHH
Q 011311 364 QKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYA----EQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 364 q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~----DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
..+++..+++ +|||||.||+.|++++|+|+|++|... ||..||..+++. |+|+.+... ..+.+.|.
T Consensus 66 m~~~m~~aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~~-------~~~~~~L~ 135 (167)
T PF04101_consen 66 MAELMAAADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDES-------ELNPEELA 135 (167)
T ss_dssp HHHHHHHHSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSECC-------C-SCCCHH
T ss_pred HHHHHHHcCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCcc-------cCCHHHHH
Confidence 6779999999 999999999999999999999999988 999999999887 999988754 67799999
Q ss_pred HHHHHHhcCCH
Q 011311 440 RAVGCVMDGDS 450 (489)
Q Consensus 440 ~ai~~vl~~~~ 450 (489)
++|.++++ ++
T Consensus 136 ~~i~~l~~-~~ 145 (167)
T PF04101_consen 136 EAIEELLS-DP 145 (167)
T ss_dssp HHHHCHCC-CH
T ss_pred HHHHHHHc-Cc
Confidence 99999998 54
No 40
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.44 E-value=2.2e-10 Score=115.63 Aligned_cols=166 Identities=14% Similarity=0.238 Sum_probs=108.1
Q ss_pred CCCceEEEeecCCcCCCHHHHHHHHHHHhh--cCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccc
Q 011311 284 PASSVVFLCFGSMGSFGEEQIQEIASGLEK--SGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGW 361 (489)
Q Consensus 284 ~~~~vV~vs~GS~~~~~~~~~~~~~~al~~--~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w 361 (489)
+++++|++..|++.. ...+..+++++.+ .+.++++..|.+. .+.+.+-+.. ...+++.+.+|
T Consensus 200 ~~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~------------~l~~~l~~~~--~~~~~v~~~G~ 263 (391)
T PRK13608 200 PDKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK------------ELKRSLTAKF--KSNENVLILGY 263 (391)
T ss_pred CCCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH------------HHHHHHHHHh--ccCCCeEEEec
Confidence 345688888888652 2335555555432 3467777766431 0001111100 11246777799
Q ss_pred cCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEec-cCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHH
Q 011311 362 APQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW-PIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 362 ~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
+++. +++..+++ +|+..|..|+.||+++|+|+|+. |..++|..|+..+.+. |+|+... +.+++.
T Consensus 264 ~~~~~~~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~-----------~~~~l~ 329 (391)
T PRK13608 264 TKHMNEWMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD-----------TPEEAI 329 (391)
T ss_pred cchHHHHHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC-----------CHHHHH
Confidence 9765 59999999 99998888999999999999998 7777778999887776 9997642 788999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011311 440 RAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDL 484 (489)
Q Consensus 440 ~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 484 (489)
++|.++++ +++.+ +++++..++. .+..+....++.+++.+
T Consensus 330 ~~i~~ll~-~~~~~---~~m~~~~~~~-~~~~s~~~i~~~l~~l~ 369 (391)
T PRK13608 330 KIVASLTN-GNEQL---TNMISTMEQD-KIKYATQTICRDLLDLI 369 (391)
T ss_pred HHHHHHhc-CHHHH---HHHHHHHHHh-cCCCCHHHHHHHHHHHh
Confidence 99999998 55333 3344444443 33445555555544433
No 41
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.41 E-value=1.1e-10 Score=109.33 Aligned_cols=332 Identities=17% Similarity=0.186 Sum_probs=185.4
Q ss_pred cEEEEEcCC--CccCHHHHHHHHHHHhhhhc--CCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 5 AELVFIPSP--SVGHLVSVIVFAKRLLLLDR--DNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 5 ~~i~~~~~~--~~GHi~P~l~la~~L~~~~r--G~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
++|+|.+.- +-||+.-++.+|+.| ++. | ++|++++..+. .... ....+++|
T Consensus 10 ~Ri~~Yshd~~GlGHlrR~~~Ia~aL--v~d~~~--------~~Il~IsG~~~----------~~~F-----~~~~gVd~ 64 (400)
T COG4671 10 PRILFYSHDLLGLGHLRRALRIAHAL--VEDYLG--------FDILIISGGPP----------AGGF-----PGPAGVDF 64 (400)
T ss_pred ceEEEEehhhccchHHHHHHHHHHHH--hhcccC--------ceEEEEeCCCc----------cCCC-----CCcccCce
Confidence 469998875 789999999999999 887 9 99999998754 2222 23468999
Q ss_pred EEcCCCCCCC-CCCC-CChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhH
Q 011311 81 IGVPKMNPPP-LDYF-KSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGA 158 (489)
Q Consensus 81 ~~l~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~ 158 (489)
+.+|.....+ .+.. .+...-..++.+.-.+.+....+ ..+||++|+|.+-.+.. -|.+ |.
T Consensus 65 V~LPsl~k~~~G~~~~~d~~~~l~e~~~~Rs~lil~t~~------~fkPDi~IVd~~P~Glr--~EL~--pt-------- 126 (400)
T COG4671 65 VKLPSLIKGDNGEYGLVDLDGDLEETKKLRSQLILSTAE------TFKPDIFIVDKFPFGLR--FELL--PT-------- 126 (400)
T ss_pred EecCceEecCCCceeeeecCCCHHHHHHHHHHHHHHHHH------hcCCCEEEEeccccchh--hhhh--HH--------
Confidence 9999654111 1111 11111122332222222222222 35999999997654310 0000 00
Q ss_pred HHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhcc-ceEEe---cchhHhhH
Q 011311 159 AFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKET-KGIIV---NTFEELES 234 (489)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gi~~---~s~~~l~~ 234 (489)
+ .+.... ...+-+. -....|.|......+. ... ....+.+. +.+++ +.|.+++.
T Consensus 127 --L-~yl~~~--------------~t~~vL~-lr~i~D~p~~~~~~w~-~~~---~~~~I~r~yD~V~v~GdP~f~d~~~ 184 (400)
T COG4671 127 --L-EYLKTT--------------GTRLVLG-LRSIRDIPQELEADWR-RAE---TVRLINRFYDLVLVYGDPDFYDPLT 184 (400)
T ss_pred --H-HHHhhc--------------CCcceee-hHhhhhchhhhccchh-hhH---HHHHHHHhheEEEEecCccccChhh
Confidence 0 000000 0000000 0111222221111100 111 12222232 23333 33444443
Q ss_pred HHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhh-
Q 011311 235 HAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEK- 313 (489)
Q Consensus 235 ~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~- 313 (489)
.+.... ....+++|+|.+-..-+. .+.+.- ..+++.-|+||-|.-. ...+.+...+.|-..
T Consensus 185 ~~~~~~---~i~~k~~ytG~vq~~~~~--------~~~p~~------~~pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l 246 (400)
T COG4671 185 EFPFAP---AIRAKMRYTGFVQRSLPH--------LPLPPH------EAPEGFDILVSVGGGA-DGAELIETALAAAQLL 246 (400)
T ss_pred cCCccH---hhhhheeEeEEeeccCcC--------CCCCCc------CCCccceEEEecCCCh-hhHHHHHHHHHHhhhC
Confidence 221110 011358999977211110 011100 0134557888877722 344556666666544
Q ss_pred cCCe--EEEEecCCCCCCCCCCCCCcccccccCChh----hHhhhc--CCCccccccCHH-HHhccCCcceEEecCCchh
Q 011311 314 SGVR--FLWSLRKTPPKDRPEMPGEYTCVEDILPRG----FQERSK--GRGMICGWAPQK-EVLAHSAIGGFVSHCGWNS 384 (489)
Q Consensus 314 ~~~~--~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~----~~~~~~--~~~~v~~w~pq~-~iL~~~~~~~~i~HgG~~s 384 (489)
.+.+ .+..+|+. .|.. +....+ +++.+..|-.+. .++..+.. +|+-||+||
T Consensus 247 ~~l~~~~~ivtGP~------------------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNT 306 (400)
T COG4671 247 AGLNHKWLIVTGPF------------------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNT 306 (400)
T ss_pred CCCCcceEEEeCCC------------------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchh
Confidence 4444 66667765 3332 122223 566777887665 58888888 999999999
Q ss_pred HHHHHHhCCcEEeccCc---chhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhc
Q 011311 385 ILESVWFGVPIVTWPIY---AEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMD 447 (489)
Q Consensus 385 ~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~ 447 (489)
+.|-+++|+|.+++|.. .+|-.-|.|+++ ||+--.+..+ .+|++.++++|...+.
T Consensus 307 vCeILs~~k~aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~pe-------~lt~~~La~al~~~l~ 364 (400)
T COG4671 307 VCEILSFGKPALIVPRAAPREEQLIRAQRLEE-LGLVDVLLPE-------NLTPQNLADALKAALA 364 (400)
T ss_pred hhHHHhCCCceEEeccCCCcHHHHHHHHHHHh-cCcceeeCcc-------cCChHHHHHHHHhccc
Confidence 99999999999999985 589999999865 5998888766 8999999999998887
No 42
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.40 E-value=2.9e-10 Score=114.34 Aligned_cols=172 Identities=19% Similarity=0.175 Sum_probs=103.2
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHhhc----CCeEEEEecCCCCCCCCCCCCCcccccccCCh-hhHhh--------
Q 011311 285 ASSVVFLCFGSMGSFGEEQIQEIASGLEKS----GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPR-GFQER-------- 351 (489)
Q Consensus 285 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~----~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~-~~~~~-------- 351 (489)
++++|.+--||...--.+.+..++++++.. +..|++.+.+.. +++.+...+.. ++...
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~---------~~~~~~~~l~~~g~~~~~~~~~~~~ 274 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSL---------SLEKLQAILEDLGWQLEGSSEDQTS 274 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCC---------CHHHHHHHHHhcCceecCCccccch
Confidence 346888888886422223344566665543 678888874331 11111111100 10000
Q ss_pred --hcCCCccccccC-HHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHh---hCeEEEeeecc
Q 011311 352 --SKGRGMICGWAP-QKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRD---LGLAVELRLDY 425 (489)
Q Consensus 352 --~~~~~~v~~w~p-q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~---~G~G~~l~~~~ 425 (489)
..+++.+..+.. -.+++..+++ +|+-+|..| .|++..|+|+|++|+-..|. ||..+.+. .|.++.+.
T Consensus 275 ~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~--- 347 (396)
T TIGR03492 275 LFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLA--- 347 (396)
T ss_pred hhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecC---
Confidence 011233444443 3569999999 999999766 99999999999999888887 88654331 26666654
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
..+.+.|.+++.++++ |++.+++.. +..++.+++++++.+..+.+.+
T Consensus 348 ------~~~~~~l~~~l~~ll~-d~~~~~~~~---~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 348 ------SKNPEQAAQVVRQLLA-DPELLERCR---RNGQERMGPPGASARIAESILK 394 (396)
T ss_pred ------CCCHHHHHHHHHHHHc-CHHHHHHHH---HHHHHhcCCCCHHHHHHHHHHH
Confidence 3456999999999998 665443333 2344445566777666554443
No 43
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.40 E-value=1.2e-09 Score=109.97 Aligned_cols=113 Identities=19% Similarity=0.180 Sum_probs=83.5
Q ss_pred CCCccccccCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhh-HHHHHHHHhhCeEEEeeeccccCCCC
Q 011311 354 GRGMICGWAPQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQ-INAFQMVRDLGLAVELRLDYRRGTEN 431 (489)
Q Consensus 354 ~~~~v~~w~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~-~na~~v~~~~G~G~~l~~~~~~~~~~ 431 (489)
.++.+.+|+++. +++..+++ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+.+. |.|+.+
T Consensus 265 ~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~---------- 331 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFS---------- 331 (382)
T ss_pred CCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-Cceeec----------
Confidence 356677898865 59999999 999999999999999999999998776675 789888776 999753
Q ss_pred ccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011311 432 HVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDL 484 (489)
Q Consensus 432 ~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 484 (489)
-++++|.++|.++++++++.+ +++++..++. ....++...++.+.+.+
T Consensus 332 -~~~~~la~~i~~ll~~~~~~~---~~m~~~~~~~-~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 332 -ESPKEIARIVAEWFGDKSDEL---EAMSENALKL-ARPEAVFDIVHDLHELV 379 (382)
T ss_pred -CCHHHHHHHHHHHHcCCHHHH---HHHHHHHHHh-cCCchHHHHHHHHHHHh
Confidence 278999999999998324433 3344444443 33455555555555443
No 44
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.14 E-value=5.9e-11 Score=101.49 Aligned_cols=124 Identities=11% Similarity=0.124 Sum_probs=77.2
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKM 86 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~ 86 (489)
|+|.+.|+.||++|+++||++| ++|| |+|++++.+ .+.+.+. ..|++|.+++..
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L--~~rG--------h~V~~~~~~----------~~~~~v~------~~Gl~~~~~~~~ 54 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARAL--RRRG--------HEVRLATPP----------DFRERVE------AAGLEFVPIPGD 54 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHH--HHTT---------EEEEEETG----------GGHHHHH------HTT-EEEESSSC
T ss_pred CEEEEcCChhHHHHHHHHHHHH--hccC--------CeEEEeecc----------cceeccc------ccCceEEEecCC
Confidence 7899999999999999999999 9999 679999876 4566666 668999998865
Q ss_pred CCCCCCCCCChHHHHHHHHHH--hhHHHHHHHHHHHhc------CCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhH
Q 011311 87 NPPPLDYFKSPEKFITEYVDS--HKDCIKEAIIEHVLN------NNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGA 158 (489)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~------~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~ 158 (489)
. ...........+...... ....+.+.+.+.... .....|+++.+.....+..+||++|||++.....+.
T Consensus 55 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~ 132 (139)
T PF03033_consen 55 S--RLPRSLEPLANLRRLARLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPW 132 (139)
T ss_dssp G--GGGHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGG
T ss_pred c--CcCcccchhhhhhhHHHHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCc
Confidence 0 000000011111111111 011112222222211 123567788888777889999999999998766553
No 45
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.02 E-value=1.3e-06 Score=86.55 Aligned_cols=157 Identities=19% Similarity=0.204 Sum_probs=95.5
Q ss_pred ceEEEeecCCc-CCCHHHHHHHHHHHhhc-CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCH
Q 011311 287 SVVFLCFGSMG-SFGEEQIQEIASGLEKS-GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQ 364 (489)
Q Consensus 287 ~vV~vs~GS~~-~~~~~~~~~~~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq 364 (489)
+.+++..|++. ....+.+.++++.+... +..+++. |.... . ..+. ...+++.+.+|+++
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~-G~~~~---------~--------~~~~-~~~~~v~~~g~~~~ 257 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIV-GDGPA---------R--------ARLE-ARYPNVHFLGFLDG 257 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEE-eCCch---------H--------HHHh-ccCCcEEEEeccCH
Confidence 45667777754 23344455555555442 4455444 43210 0 0110 22367788899987
Q ss_pred HH---HhccCCcceEEecCC----chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHH
Q 011311 365 KE---VLAHSAIGGFVSHCG----WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADE 437 (489)
Q Consensus 365 ~~---iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~ 437 (489)
.+ ++..+++ +|..+. .++++||+++|+|+|+.+..+ +...+.+. +.|.... .-+.++
T Consensus 258 ~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~-~~g~~~~---------~~~~~~ 321 (364)
T cd03814 258 EELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDG-ENGLLVE---------PGDAEA 321 (364)
T ss_pred HHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCC-cceEEcC---------CCCHHH
Confidence 65 7999998 886654 478999999999999988664 33344444 7887765 347788
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 011311 438 LARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIED 483 (489)
Q Consensus 438 l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 483 (489)
+.++|.+++. +++.+++..+-+.... ..-+.....+++++-
T Consensus 322 l~~~i~~l~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 362 (364)
T cd03814 322 FAAALAALLA-DPELRRRMAARARAEA----ERRSWEAFLDNLLEA 362 (364)
T ss_pred HHHHHHHHHc-CHHHHHHHHHHHHHHH----hhcCHHHHHHHHHHh
Confidence 9999999998 6655444333333322 134444555555543
No 46
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.90 E-value=2.8e-06 Score=83.94 Aligned_cols=84 Identities=24% Similarity=0.175 Sum_probs=59.8
Q ss_pred cCCCccccccCHHH---HhccCCcceEEe----cCC-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeec
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVS----HCG-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLD 424 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~----HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 424 (489)
.+++.+.+|+++.+ ++..+++ +|. ..| ..++.||+++|+|+|+.+..+ +...+.+. +.|..+..
T Consensus 242 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~e~i~~~-~~g~~~~~- 313 (359)
T cd03823 242 DPRVEFLGAYPQEEIDDFYAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDIGG----MAELVRDG-VNGLLFPP- 313 (359)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCCC----HHHHhcCC-CcEEEECC-
Confidence 36777889997655 6899998 663 233 347999999999999976543 34444333 56777653
Q ss_pred cccCCCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 425 YRRGTENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 425 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
-+.+++++++.++++ ++..+
T Consensus 314 --------~d~~~l~~~i~~l~~-~~~~~ 333 (359)
T cd03823 314 --------GDAEDLAAALERLID-DPDLL 333 (359)
T ss_pred --------CCHHHHHHHHHHHHh-ChHHH
Confidence 368999999999998 55433
No 47
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.87 E-value=1e-05 Score=81.70 Aligned_cols=83 Identities=18% Similarity=0.181 Sum_probs=60.4
Q ss_pred CCCccccccCHHH---HhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 354 GRGMICGWAPQKE---VLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 354 ~~~~v~~w~pq~~---iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
+++.+.+|+|+.+ +|..+++ ++.. +--.++.||+++|+|+|+-...+ ....+.+. +.|..++.
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~-~~g~~~~~--- 352 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDG-VTGLLVDP--- 352 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCC-CCeEEeCC---
Confidence 5677789999865 5889998 6643 22368999999999999877544 33334333 67877653
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 427 RGTENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
-+.++++++|.++++ ++..+
T Consensus 353 ------~~~~~l~~~i~~l~~-~~~~~ 372 (398)
T cd03800 353 ------RDPEALAAALRRLLT-DPALR 372 (398)
T ss_pred ------CCHHHHHHHHHHHHh-CHHHH
Confidence 378999999999998 55433
No 48
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.80 E-value=5e-06 Score=82.90 Aligned_cols=139 Identities=22% Similarity=0.252 Sum_probs=82.9
Q ss_pred CceEEEeecCCc-CCCHHHHHHHHHHHhhc-CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccC
Q 011311 286 SSVVFLCFGSMG-SFGEEQIQEIASGLEKS-GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAP 363 (489)
Q Consensus 286 ~~vV~vs~GS~~-~~~~~~~~~~~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~p 363 (489)
++.+++..|++. ....+.+.+.+..+.+. +.++++ +|... ..+. +-.-......+++.+.+|++
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~---------~~~~----~~~~~~~~~~~~v~~~g~~~ 284 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGP---------EKEE----LKELAKALGLDNVTFLGRVP 284 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcc---------cHHH----HHHHHHHcCCCcEEEeCCCC
Confidence 456777788865 23334444555555443 455544 34331 0000 10000111235677788998
Q ss_pred HHH---HhccCCcceEEecCC---------chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCC
Q 011311 364 QKE---VLAHSAIGGFVSHCG---------WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTEN 431 (489)
Q Consensus 364 q~~---iL~~~~~~~~i~HgG---------~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~ 431 (489)
+.+ ++..+++ +|.... -+++.||+++|+|+|+.+..+.+.... +. +.|..+.
T Consensus 285 ~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~----~~-~~g~~~~--------- 348 (394)
T cd03794 285 KEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVE----EA-GAGLVVP--------- 348 (394)
T ss_pred hHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhc----cC-CcceEeC---------
Confidence 654 7888998 554322 334799999999999998877655422 32 6676664
Q ss_pred ccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 432 HVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 432 ~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
.-+.++++++|.++++ ++..+++
T Consensus 349 ~~~~~~l~~~i~~~~~-~~~~~~~ 371 (394)
T cd03794 349 PGDPEALAAAILELLD-DPEERAE 371 (394)
T ss_pred CCCHHHHHHHHHHHHh-ChHHHHH
Confidence 3378999999999997 5544433
No 49
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.79 E-value=2.7e-05 Score=80.72 Aligned_cols=130 Identities=17% Similarity=0.216 Sum_probs=79.6
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhc-CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhh-cCCCccccccCHH
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKS-GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERS-KGRGMICGWAPQK 365 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~v~~w~pq~ 365 (489)
.+++..|++. ....+..++++++.. +.++++ +|... .. +.+.... ..++.+.+|+++.
T Consensus 264 ~~i~~vGrl~--~~K~~~~li~a~~~~~~~~l~i-vG~G~---------~~--------~~l~~~~~~~~V~f~G~v~~~ 323 (465)
T PLN02871 264 PLIVYVGRLG--AEKNLDFLKRVMERLPGARLAF-VGDGP---------YR--------EELEKMFAGTPTVFTGMLQGD 323 (465)
T ss_pred eEEEEeCCCc--hhhhHHHHHHHHHhCCCcEEEE-EeCCh---------HH--------HHHHHHhccCCeEEeccCCHH
Confidence 4555667754 223356677777664 456554 44321 00 1111111 2456777999865
Q ss_pred H---HhccCCcceEEecCC----chhHHHHHHhCCcEEeccCcchhhHHHHHHHH--hhCeEEEeeeccccCCCCccCHH
Q 011311 366 E---VLAHSAIGGFVSHCG----WNSILESVWFGVPIVTWPIYAEQQINAFQMVR--DLGLAVELRLDYRRGTENHVMAD 436 (489)
Q Consensus 366 ~---iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~--~~G~G~~l~~~~~~~~~~~~~~~ 436 (489)
+ +|..+++ ||.-.. .+++.||+++|+|+|+....+ ....+.+ .-+.|..++. -+.+
T Consensus 324 ev~~~~~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~~---------~d~~ 388 (465)
T PLN02871 324 ELSQAYASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYTP---------GDVD 388 (465)
T ss_pred HHHHHHHHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeCC---------CCHH
Confidence 4 8889998 775433 346899999999999876542 1222223 1277877653 3789
Q ss_pred HHHHHHHHHhcCCHHHH
Q 011311 437 ELARAVGCVMDGDSEVR 453 (489)
Q Consensus 437 ~l~~ai~~vl~~~~~~~ 453 (489)
+++++|.++++ +++.+
T Consensus 389 ~la~~i~~ll~-~~~~~ 404 (465)
T PLN02871 389 DCVEKLETLLA-DPELR 404 (465)
T ss_pred HHHHHHHHHHh-CHHHH
Confidence 99999999998 55443
No 50
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.77 E-value=5.4e-05 Score=76.72 Aligned_cols=85 Identities=21% Similarity=0.151 Sum_probs=58.3
Q ss_pred CCCccccccCHHH---HhccCCcceEEec-CC-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQKE---VLAHSAIGGFVSH-CG-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq~~---iL~~~~~~~~i~H-gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+.+++|+.+ +|..+++-++.+. .| ..++.||+++|+|+|+.... .....+.+. ..|..++
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~----g~~e~i~~~-~~G~lv~------ 349 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTA----PVREVITDG-ENGLLVD------ 349 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCC----CchhhcccC-CceEEcC------
Confidence 5777889999765 6788888222232 22 24899999999999986543 334343332 4676665
Q ss_pred CCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 429 TENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
.-+.++++++|.++++ +++.+
T Consensus 350 ---~~d~~~la~~i~~ll~-~~~~~ 370 (396)
T cd03818 350 ---FFDPDALAAAVIELLD-DPARR 370 (396)
T ss_pred ---CCCHHHHHHHHHHHHh-CHHHH
Confidence 3479999999999998 65433
No 51
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.77 E-value=2.5e-05 Score=79.94 Aligned_cols=101 Identities=23% Similarity=0.263 Sum_probs=66.6
Q ss_pred HHHhccCCcceEEec-----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHH
Q 011311 365 KEVLAHSAIGGFVSH-----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 365 ~~iL~~~~~~~~i~H-----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
..+++.+++ ++.. +|..+++||+++|+|+|+-|..+++......+.+. |.++.. -+.++|+
T Consensus 314 ~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~-----------~d~~~La 379 (425)
T PRK05749 314 GLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQV-----------EDAEDLA 379 (425)
T ss_pred HHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEE-----------CCHHHHH
Confidence 358889987 3321 34446999999999999999988888877766555 766542 2679999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHH
Q 011311 440 RAVGCVMDGDSEVRKRVKEVSEKARLALR-DGGSSYAATGRLIED 483 (489)
Q Consensus 440 ~ai~~vl~~~~~~~~~a~~l~~~~~~~~~-~~g~~~~~~~~~~~~ 483 (489)
++|.++++ |++.+++. ++..++... ..|...+.++.+.+.
T Consensus 380 ~~l~~ll~-~~~~~~~m---~~~a~~~~~~~~~~~~~~~~~l~~~ 420 (425)
T PRK05749 380 KAVTYLLT-DPDARQAY---GEAGVAFLKQNQGALQRTLQLLEPY 420 (425)
T ss_pred HHHHHHhc-CHHHHHHH---HHHHHHHHHhCccHHHHHHHHHHHh
Confidence 99999998 66444333 333332221 235555555554443
No 52
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.76 E-value=2.5e-06 Score=78.20 Aligned_cols=143 Identities=17% Similarity=0.190 Sum_probs=96.0
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccC-HH
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAP-QK 365 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~p-q~ 365 (489)
.-|+|++|- +.+....-+++..|.+.++.+=.++|...+. .+.++... + -.+|..+..... -.
T Consensus 159 r~ilI~lGG--sDpk~lt~kvl~~L~~~~~nl~iV~gs~~p~------------l~~l~k~~-~-~~~~i~~~~~~~dma 222 (318)
T COG3980 159 RDILITLGG--SDPKNLTLKVLAELEQKNVNLHIVVGSSNPT------------LKNLRKRA-E-KYPNINLYIDTNDMA 222 (318)
T ss_pred heEEEEccC--CChhhhHHHHHHHhhccCeeEEEEecCCCcc------------hhHHHHHH-h-hCCCeeeEecchhHH
Confidence 358999987 4445567788999988887766777743210 11122111 1 124444443333 34
Q ss_pred HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHH
Q 011311 366 EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCV 445 (489)
Q Consensus 366 ~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~v 445 (489)
.+...|+. .|+-+|. |+.|++.-|+|.+++|+...|-.-|+.++.. |+-..+.. .++.+....-+.++
T Consensus 223 ~LMke~d~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~l-g~~~~l~~--------~l~~~~~~~~~~~i 290 (318)
T COG3980 223 ELMKEADL--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEAL-GIIKQLGY--------HLKDLAKDYEILQI 290 (318)
T ss_pred HHHHhcch--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHhc-CchhhccC--------CCchHHHHHHHHHh
Confidence 58899998 9988886 8999999999999999999999999987554 77665542 35666666666677
Q ss_pred hcCCHHHHHHHHH
Q 011311 446 MDGDSEVRKRVKE 458 (489)
Q Consensus 446 l~~~~~~~~~a~~ 458 (489)
++ |...|++.-.
T Consensus 291 ~~-d~~~rk~l~~ 302 (318)
T COG3980 291 QK-DYARRKNLSF 302 (318)
T ss_pred hh-CHHHhhhhhh
Confidence 77 6666655443
No 53
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.75 E-value=4.2e-05 Score=76.44 Aligned_cols=83 Identities=16% Similarity=0.095 Sum_probs=57.5
Q ss_pred CCCccccccCHH-HHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQK-EVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq~-~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+.++.++. .+|..+++ +|.- |.-.++.||+++|+|+|+.... ..+..+.+. ..|..++
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~-~~G~~~~------ 319 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHG-ETGFLVD------ 319 (371)
T ss_pred ceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCC-CceEEcC------
Confidence 456667777654 58999998 6522 3345999999999999996543 344444333 5676554
Q ss_pred CCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 429 TENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
.-+.+++++++.++++ ++..+
T Consensus 320 ---~~~~~~l~~~i~~l~~-~~~~~ 340 (371)
T cd04962 320 ---VGDVEAMAEYALSLLE-DDELW 340 (371)
T ss_pred ---CCCHHHHHHHHHHHHh-CHHHH
Confidence 3378999999999998 55443
No 54
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.67 E-value=8.1e-05 Score=73.73 Aligned_cols=80 Identities=19% Similarity=0.184 Sum_probs=57.2
Q ss_pred cCCCccccccCHHH---HhccCCcceEEecC----CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVSHC----GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
.+++.+.+++|+.+ ++..+++ +|..+ ..+++.||+++|+|+|+.... ..+..+.+. +.|..+...
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~~-~~g~~~~~~- 329 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVADG-ENGFLFPPG- 329 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----ChhhheecC-ceeEEeCCC-
Confidence 36777889998765 7889998 66333 347899999999999997653 234444343 677766532
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDS 450 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~ 450 (489)
+. ++.+++.++++ ++
T Consensus 330 --------~~-~~~~~i~~l~~-~~ 344 (374)
T cd03817 330 --------DE-ALAEALLRLLQ-DP 344 (374)
T ss_pred --------CH-HHHHHHHHHHh-Ch
Confidence 22 89999999998 54
No 55
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.66 E-value=0.00028 Score=71.90 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=69.9
Q ss_pred CCCccccccCHHH---HhccCCcceEEecCCc------hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeec
Q 011311 354 GRGMICGWAPQKE---VLAHSAIGGFVSHCGW------NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLD 424 (489)
Q Consensus 354 ~~~~v~~w~pq~~---iL~~~~~~~~i~HgG~------~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 424 (489)
+|+.+.+|+|+.+ +|+.+++..+.+..+. +.+.|++++|+|+|+....+... . .+.+ +.|+.++.
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~--~-~~i~--~~G~~~~~- 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTEL--G-QLVE--GIGVCVEP- 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchH--H-HHHh--CCcEEeCC-
Confidence 4677789998754 7889998555555432 24689999999999987644211 1 1223 66776653
Q ss_pred cccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 425 YRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 425 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
-+.++++++|.++++ ++..+++ +++..++...+.=+....++++++.+.
T Consensus 358 --------~d~~~la~~i~~l~~-~~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~~~ 406 (412)
T PRK10307 358 --------ESVEALVAAIAALAR-QALLRPK---LGTVAREYAERTLDKENVLRQFIADIR 406 (412)
T ss_pred --------CCHHHHHHHHHHHHh-CHHHHHH---HHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 378999999999998 5533333 233333222223344445555554443
No 56
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.66 E-value=8.1e-05 Score=73.11 Aligned_cols=84 Identities=23% Similarity=0.283 Sum_probs=58.0
Q ss_pred CCCccccccCH-HHHhccCCcceEEecCC----chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQ-KEVLAHSAIGGFVSHCG----WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq-~~iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+.++..+ ..++..+++ +|.-.. .+++.||+++|+|+|+-+..+- ...+.+. +.|..++
T Consensus 246 ~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~----~~~i~~~-~~g~~~~------ 312 (359)
T cd03808 246 GRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPGC----REAVIDG-VNGFLVP------ 312 (359)
T ss_pred ceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCCc----hhhhhcC-cceEEEC------
Confidence 45566666544 458999998 665433 5789999999999999765432 3333333 6777664
Q ss_pred CCCccCHHHHHHHHHHHhcCCHHHHH
Q 011311 429 TENHVMADELARAVGCVMDGDSEVRK 454 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~~~~~ 454 (489)
.-+.+++.++|.+++. +++.++
T Consensus 313 ---~~~~~~~~~~i~~l~~-~~~~~~ 334 (359)
T cd03808 313 ---PGDAEALADAIERLIE-DPELRA 334 (359)
T ss_pred ---CCCHHHHHHHHHHHHh-CHHHHH
Confidence 3378999999999888 554433
No 57
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.64 E-value=0.00012 Score=71.98 Aligned_cols=85 Identities=21% Similarity=0.235 Sum_probs=61.2
Q ss_pred cCCCccccccCHH---HHhccCCcceEEe----cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 353 KGRGMICGWAPQK---EVLAHSAIGGFVS----HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 353 ~~~~~v~~w~pq~---~iL~~~~~~~~i~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
.+++.+.+++++. .+|..+++ +|. -|..+++.||+++|+|+|+.+.. .....+.+. +.|...+
T Consensus 255 ~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~----~~~~~~~~~-~~g~~~~--- 324 (374)
T cd03801 255 GDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDVG----GIPEVVEDG-ETGLLVP--- 324 (374)
T ss_pred CcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCCC----ChhHHhcCC-cceEEeC---
Confidence 4677788999754 37889998 663 24567899999999999997763 334344334 6777665
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCHHHHH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDSEVRK 454 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~ 454 (489)
.-+.+++.++|.++++ ++..++
T Consensus 325 ------~~~~~~l~~~i~~~~~-~~~~~~ 346 (374)
T cd03801 325 ------PGDPEALAEAILRLLD-DPELRR 346 (374)
T ss_pred ------CCCHHHHHHHHHHHHc-ChHHHH
Confidence 3468999999999998 554433
No 58
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.63 E-value=0.00038 Score=70.64 Aligned_cols=85 Identities=15% Similarity=0.123 Sum_probs=59.8
Q ss_pred CCCccccccCHH---HHhccCCcceEEe---cCC-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 354 GRGMICGWAPQK---EVLAHSAIGGFVS---HCG-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 354 ~~~~v~~w~pq~---~iL~~~~~~~~i~---HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
+++.+.+++++. ++|..+++ +|. +-| -.+++||+++|+|+|+....+ ....+.+. +.|+.++.
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~-~~g~~~~~--- 352 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADG-ETGLLVDG--- 352 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccC-CceEECCC---
Confidence 567888999865 47999998 663 223 358999999999999976543 22233333 56776642
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 427 RGTENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
-+.++++++|.++++ +++.+++
T Consensus 353 ------~d~~~la~~i~~~l~-~~~~~~~ 374 (405)
T TIGR03449 353 ------HDPADWADALARLLD-DPRTRIR 374 (405)
T ss_pred ------CCHHHHHHHHHHHHh-CHHHHHH
Confidence 378999999999998 5544433
No 59
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.62 E-value=0.00013 Score=71.24 Aligned_cols=90 Identities=26% Similarity=0.416 Sum_probs=61.8
Q ss_pred CCCccccccCH-HHHhccCCcceEEecCC----chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhC-eEEEeeecccc
Q 011311 354 GRGMICGWAPQ-KEVLAHSAIGGFVSHCG----WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLG-LAVELRLDYRR 427 (489)
Q Consensus 354 ~~~~v~~w~pq-~~iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~ 427 (489)
+++.+.++... ..++..+++ +|.-.. -+++.||+++|+|+|+.+..+.+.. +.+. | .|..++
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~----~~~~-~~~g~~~~----- 302 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSE----IIED-GVNGLLVP----- 302 (348)
T ss_pred CeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchHh----hhcc-CcceEEeC-----
Confidence 44555566333 458899998 665542 4689999999999999776554433 3344 4 777665
Q ss_pred CCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011311 428 GTENHVMADELARAVGCVMDGDSEVRKRVKEVS 460 (489)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~ 460 (489)
.-+.++++++|.++++ +++.+++..+-+
T Consensus 303 ----~~~~~~~~~~i~~ll~-~~~~~~~~~~~~ 330 (348)
T cd03820 303 ----NGDVEALAEALLRLME-DEELRKRMGANA 330 (348)
T ss_pred ----CCCHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 3478999999999998 665555444443
No 60
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.59 E-value=0.00011 Score=73.01 Aligned_cols=111 Identities=15% Similarity=0.127 Sum_probs=68.9
Q ss_pred CCCccccccC-HH---HHhccCCcceEEecC----CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 354 GRGMICGWAP-QK---EVLAHSAIGGFVSHC----GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 354 ~~~~v~~w~p-q~---~iL~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
.++...+|++ +. .++..+++ +|.-. ..+++.||+++|+|+|+....+= ...+.+. +.|..++
T Consensus 244 ~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~----~e~~~~~-~~g~~~~--- 313 (365)
T cd03825 244 FPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGGI----PDIVDHG-VTGYLAK--- 313 (365)
T ss_pred CceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCCC----hhheeCC-CceEEeC---
Confidence 4566778988 43 47889998 77653 35799999999999998765322 2222232 4676554
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDL 484 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 484 (489)
..+.+++++++.++++ +++.+++ +++..++...+.-+.....+++++-.
T Consensus 314 ------~~~~~~~~~~l~~l~~-~~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~~y 362 (365)
T cd03825 314 ------PGDPEDLAEGIEWLLA-DPDEREE---LGEAARELAENEFDSRVQAKRYLSLY 362 (365)
T ss_pred ------CCCHHHHHHHHHHHHh-CHHHHHH---HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3478999999999998 5543322 33333332222344445555555433
No 61
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.57 E-value=9.7e-06 Score=81.18 Aligned_cols=106 Identities=17% Similarity=0.179 Sum_probs=73.3
Q ss_pred CCCccccccCHH---HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 354 GRGMICGWAPQK---EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 354 ~~~~v~~w~pq~---~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
+++.+.+.+++. .++..+++ +|+-.|.. +.||+++|+|+|.++..++++. +.+. |.++.+.
T Consensus 255 ~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~-------- 318 (365)
T TIGR00236 255 KRVHLIEPLEYLDFLNLAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVG-------- 318 (365)
T ss_pred CCEEEECCCChHHHHHHHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeC--------
Confidence 466776666544 57788887 89877644 7999999999999977666553 2344 7776542
Q ss_pred CccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 431 NHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
-++++|.+++.++++ ++..+++..+-. ...++|+++.+.++.+.+
T Consensus 319 --~d~~~i~~ai~~ll~-~~~~~~~~~~~~----~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 319 --TDKENITKAAKRLLT-DPDEYKKMSNAS----NPYGDGEASERIVEELLN 363 (365)
T ss_pred --CCHHHHHHHHHHHHh-ChHHHHHhhhcC----CCCcCchHHHHHHHHHHh
Confidence 378999999999998 665555433222 224567777777766554
No 62
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.55 E-value=0.00048 Score=70.25 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=52.3
Q ss_pred CCccc-cccCHHH---HhccCCcceEEe-c---CC---chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeee
Q 011311 355 RGMIC-GWAPQKE---VLAHSAIGGFVS-H---CG---WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRL 423 (489)
Q Consensus 355 ~~~v~-~w~pq~~---iL~~~~~~~~i~-H---gG---~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 423 (489)
++.+. +|+|..+ +|..+++ +|. + -| -++++||+++|+|+|+.... ..... ++.-+.|+.+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~ei-v~~~~~G~lv~- 366 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDEL-VKHGENGLVFG- 366 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHH-hcCCCCEEEEC-
Confidence 44444 6888654 6889998 663 1 12 44799999999999996543 23334 34426787651
Q ss_pred ccccCCCCccCHHHHHHHHHHHhcC
Q 011311 424 DYRRGTENHVMADELARAVGCVMDG 448 (489)
Q Consensus 424 ~~~~~~~~~~~~~~l~~ai~~vl~~ 448 (489)
+.++++++|.+++++
T Consensus 367 ----------d~~~la~~i~~ll~~ 381 (415)
T cd03816 367 ----------DSEELAEQLIDLLSN 381 (415)
T ss_pred ----------CHHHHHHHHHHHHhc
Confidence 689999999999983
No 63
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.54 E-value=4.2e-06 Score=83.64 Aligned_cols=137 Identities=12% Similarity=0.159 Sum_probs=82.8
Q ss_pred CCceEEEeecCCcCC-CHHHHHHHHHHHhhcCCe-EEEEecCCCCCCCCCCCCCcccccccCChhhHhhh---cCCCccc
Q 011311 285 ASSVVFLCFGSMGSF-GEEQIQEIASGLEKSGVR-FLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERS---KGRGMIC 359 (489)
Q Consensus 285 ~~~vV~vs~GS~~~~-~~~~~~~~~~al~~~~~~-~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~---~~~~~v~ 359 (489)
+++.|++++|..... ....+..++++++....+ +++...... . .. ..+-+ ..... .+++.+.
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~-~-------~~----~~l~~-~~~~~~~~~~~v~~~ 263 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHP-R-------TR----PRIRE-AGLEFLGHHPNVLLI 263 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCC-C-------hH----HHHHH-HHHhhccCCCCEEEE
Confidence 346778888876533 345677888888765332 333332221 0 00 11111 11111 2456665
Q ss_pred cccCHH---HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHH
Q 011311 360 GWAPQK---EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMAD 436 (489)
Q Consensus 360 ~w~pq~---~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~ 436 (489)
+..++. .++..+++ ||+..| |.+.|++++|+|+|+++.. |. ++.+++. |+++.+. . +.+
T Consensus 264 ~~~~~~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~---------~-~~~ 325 (363)
T cd03786 264 SPLGYLYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVG---------T-DPE 325 (363)
T ss_pred CCcCHHHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecC---------C-CHH
Confidence 555443 46778998 999999 7788999999999998743 22 3334455 7665442 1 589
Q ss_pred HHHHHHHHHhcCCHHHH
Q 011311 437 ELARAVGCVMDGDSEVR 453 (489)
Q Consensus 437 ~l~~ai~~vl~~~~~~~ 453 (489)
+|.++|.++++ ++..+
T Consensus 326 ~i~~~i~~ll~-~~~~~ 341 (363)
T cd03786 326 AILAAIEKLLS-DEFAY 341 (363)
T ss_pred HHHHHHHHHhc-Cchhh
Confidence 99999999998 54333
No 64
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.52 E-value=0.00062 Score=67.15 Aligned_cols=82 Identities=18% Similarity=0.152 Sum_probs=59.3
Q ss_pred cCCCccccccCHH---HHhccCCcceEEe----cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 353 KGRGMICGWAPQK---EVLAHSAIGGFVS----HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 353 ~~~~~v~~w~pq~---~iL~~~~~~~~i~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
.+++.+.+++++. .++..+++ +|. -|..+++.||+++|+|+|+-+..+ ....+.+. +.|....
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~-~~g~~~~--- 327 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDG-ENGLLVP--- 327 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCC-cceeEEC---
Confidence 3577788999875 47888888 552 245678999999999999876544 23333333 5566654
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCHH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDSE 451 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~~ 451 (489)
.-+.+++.++|.++++ ++.
T Consensus 328 ------~~~~~~l~~~i~~~~~-~~~ 346 (377)
T cd03798 328 ------PGDPEALAEAILRLLA-DPW 346 (377)
T ss_pred ------CCCHHHHHHHHHHHhc-CcH
Confidence 4489999999999998 544
No 65
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.49 E-value=0.00029 Score=69.76 Aligned_cols=136 Identities=16% Similarity=0.111 Sum_probs=83.2
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhhcC-CeEEEEecCCCCCCCCCCCCCcccccccCChhh-HhhhcCCCccccccCH
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEKSG-VRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGF-QERSKGRGMICGWAPQ 364 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~-~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~-~~~~~~~~~v~~w~pq 364 (489)
..+++..|++. ....+..+++++++.. .++++.-.+.. ...+..-. .....+|+.+.+|+|+
T Consensus 191 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G~g~~--------------~~~~~~~~~~~~~~~~V~~~g~v~~ 254 (357)
T cd03795 191 RPFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVGEGPL--------------EAELEALAAALGLLDRVRFLGRLDD 254 (357)
T ss_pred CcEEEEecccc--cccCHHHHHHHHHhccCcEEEEEeCChh--------------HHHHHHHHHhcCCcceEEEcCCCCH
Confidence 45666778754 2233556667776665 55544432210 00010000 0122367888899997
Q ss_pred H---HHhccCCcceEEec---CCc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHH
Q 011311 365 K---EVLAHSAIGGFVSH---CGW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADE 437 (489)
Q Consensus 365 ~---~iL~~~~~~~~i~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~ 437 (489)
. .++..+++.++.++ -|. .++.||+++|+|+|+....+.+..... +. +.|.... .-+.++
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~---------~~d~~~ 321 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVP---------PGDPAA 321 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeC---------CCCHHH
Confidence 5 48888998433332 343 479999999999999876666544332 23 6776664 337999
Q ss_pred HHHHHHHHhcCCHHH
Q 011311 438 LARAVGCVMDGDSEV 452 (489)
Q Consensus 438 l~~ai~~vl~~~~~~ 452 (489)
++++|.++++ +++.
T Consensus 322 ~~~~i~~l~~-~~~~ 335 (357)
T cd03795 322 LAEAIRRLLE-DPEL 335 (357)
T ss_pred HHHHHHHHHH-CHHH
Confidence 9999999998 5533
No 66
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.49 E-value=0.00021 Score=73.90 Aligned_cols=208 Identities=13% Similarity=0.106 Sum_probs=107.9
Q ss_pred CCCCEEEec-ccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHh--h--cCCeEE
Q 011311 245 GVPPVYNVG-PMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLE--K--SGVRFL 319 (489)
Q Consensus 245 ~~p~~~~vG-p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~--~--~~~~~v 319 (489)
..-++.+|| |+....+. .....+..+-+.-.+++++|-+--||-..-=...+..++++.+ . ...+|+
T Consensus 379 ~gv~v~yVGHPL~d~i~~--------~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fv 450 (608)
T PRK01021 379 SPLRTVYLGHPLVETISS--------FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLL 450 (608)
T ss_pred cCCCeEEECCcHHhhccc--------CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEE
Confidence 344699999 66543220 1223344444443345678888899933110112334566655 3 245665
Q ss_pred EEecCCCCCCCCCCCCCcccccccCChhhHhhhcC-C---Cccc-cccCHHHHhccCCcceEEecCCchhHHHHHHhCCc
Q 011311 320 WSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKG-R---GMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVP 394 (489)
Q Consensus 320 w~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~-~---~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP 394 (489)
...-... ..+.+.+...+ . +.++ +- ...+++..|++ .+.-+|- .|+|+...|+|
T Consensus 451 vp~a~~~-----------------~~~~i~~~~~~~~~~~~~ii~~~-~~~~~m~aaD~--aLaaSGT-aTLEaAL~g~P 509 (608)
T PRK01021 451 VSSANPK-----------------YDHLILEVLQQEGCLHSHIVPSQ-FRYELMRECDC--ALAKCGT-IVLETALNQTP 509 (608)
T ss_pred EecCchh-----------------hHHHHHHHHhhcCCCCeEEecCc-chHHHHHhcCe--eeecCCH-HHHHHHHhCCC
Confidence 5432210 00111111111 1 1122 11 12579999998 7777775 47899999999
Q ss_pred EEecc-CcchhhHHHHHHHHh--hCeEE-------EeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011311 395 IVTWP-IYAEQQINAFQMVRD--LGLAV-------ELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKAR 464 (489)
Q Consensus 395 ~v~~P-~~~DQ~~na~~v~~~--~G~G~-------~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~ 464 (489)
||++= ...=-+..|+++++. -=+|+ .+-.+ -...++++|++.|++++ ++|. |+.+|++.++-=++++
T Consensus 510 mVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPE-llqgQ~~~tpe~La~~l-~lL~-d~~~r~~~~~~l~~lr 586 (608)
T PRK01021 510 TIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPE-FIGGKKDFQPEEVAAAL-DILK-TSQSKEKQKDACRDLY 586 (608)
T ss_pred EEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchh-hcCCcccCCHHHHHHHH-HHhc-CHHHHHHHHHHHHHHH
Confidence 99853 222334556666551 01221 11010 00001378999999997 7887 6656666665555666
Q ss_pred HHHhcCCChHHHHHHHHHHHhhC
Q 011311 465 LALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 465 ~~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
+.+++|-+ ..+|.++-+.+.
T Consensus 587 ~~Lg~~~~---~~~~~~~~~~~~ 606 (608)
T PRK01021 587 QAMNESAS---TMKECLSLIFET 606 (608)
T ss_pred HHhcCCCC---CHHHHHHHHHhc
Confidence 66655544 345555544443
No 67
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.47 E-value=1.1e-06 Score=72.57 Aligned_cols=114 Identities=22% Similarity=0.396 Sum_probs=79.0
Q ss_pred ceEEEeecCCcCCCH--HH--HHHHHHHHhhcCC-eEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc--
Q 011311 287 SVVFLCFGSMGSFGE--EQ--IQEIASGLEKSGV-RFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-- 359 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~--~~--~~~~~~al~~~~~-~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-- 359 (489)
..+||+-||.. ++. .. -++.++.|.+.|+ +.|..+|.+.. ..++.......+.++.+
T Consensus 4 ~~vFVTVGtT~-Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~---------------~~~d~~~~~~k~~gl~id~ 67 (170)
T KOG3349|consen 4 MTVFVTVGTTS-FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP---------------FFGDPIDLIRKNGGLTIDG 67 (170)
T ss_pred eEEEEEecccc-HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc---------------CCCCHHHhhcccCCeEEEE
Confidence 47999999965 222 11 2347788888886 77888887621 11221211111222222
Q ss_pred -cccCH-HHHhccCCcceEEecCCchhHHHHHHhCCcEEecc----CcchhhHHHHHHHHhhCeEE
Q 011311 360 -GWAPQ-KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWP----IYAEQQINAFQMVRDLGLAV 419 (489)
Q Consensus 360 -~w~pq-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P----~~~DQ~~na~~v~~~~G~G~ 419 (489)
+|-|- .+..+.+++ +|+|+|+||++|.+..|+|.|+++ +-.+|-.-|..+++. |.=.
T Consensus 68 y~f~psl~e~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL~ 130 (170)
T KOG3349|consen 68 YDFSPSLTEDIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYLY 130 (170)
T ss_pred EecCccHHHHHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcEE
Confidence 56675 567777888 999999999999999999999999 357899999999887 7643
No 68
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.45 E-value=0.001 Score=68.44 Aligned_cols=110 Identities=16% Similarity=0.102 Sum_probs=67.7
Q ss_pred cCCCccccccCHHH---HhccC----CcceEEecC---C-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEe
Q 011311 353 KGRGMICGWAPQKE---VLAHS----AIGGFVSHC---G-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVEL 421 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~----~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l 421 (489)
.+++.+.+++++.+ +|+.+ ++ ||... | -.+++||+++|+|+|+-...+ +... ++.-..|+.+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~ei-v~~~~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDI-IANCRNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHH-hcCCCcEEEe
Confidence 35666778888765 46655 55 77643 3 358999999999999987643 2223 3331467766
Q ss_pred eeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 422 RLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
+. -+.++++++|.++++ ++..+ +++++..++...+.=+-...++++.+
T Consensus 389 ~~---------~d~~~la~~i~~ll~-~~~~~---~~~~~~a~~~~~~~fsw~~~~~~~~~ 436 (439)
T TIGR02472 389 DV---------LDLEAIASALEDALS-DSSQW---QLWSRNGIEGVRRHYSWDAHVEKYLR 436 (439)
T ss_pred CC---------CCHHHHHHHHHHHHh-CHHHH---HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 53 378999999999998 65433 33444444333223333344444433
No 69
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.39 E-value=0.0015 Score=64.20 Aligned_cols=78 Identities=21% Similarity=0.210 Sum_probs=52.7
Q ss_pred CCCccccccCH-HHHhccCCcceEEecCC----chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQ-KEVLAHSAIGGFVSHCG----WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq-~~iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+.+...+ ..++..+++ +|.... .+++.||+++|+|+|+-... .+...+.+ .|..+.
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~~~e~~~~---~g~~~~------ 315 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDVG----DNAELVGD---TGFLVP------ 315 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCCC----ChHHHhhc---CCEEeC------
Confidence 34444444443 468999998 776544 37999999999999986543 33333322 344444
Q ss_pred CCCccCHHHHHHHHHHHhcCCH
Q 011311 429 TENHVMADELARAVGCVMDGDS 450 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~ 450 (489)
.-+.++++++|.++++ ++
T Consensus 316 ---~~~~~~l~~~i~~l~~-~~ 333 (365)
T cd03807 316 ---PGDPEALAEAIEALLA-DP 333 (365)
T ss_pred ---CCCHHHHHHHHHHHHh-Ch
Confidence 2368999999999998 54
No 70
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.39 E-value=0.00096 Score=65.94 Aligned_cols=84 Identities=20% Similarity=0.135 Sum_probs=57.9
Q ss_pred cCCCccccccCHHH---HhccCCcceEEecC----CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVSHC----GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
.+++.+.+|+++.+ +|..+++ +|.-. -.+++.||+++|+|+|+-+..+ .... ... +.|...+
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~-~~~-~~~~~~~--- 329 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQEL-IEY-GCGWVVD--- 329 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHH-hhc-CceEEeC---
Confidence 36677889999654 6888898 54322 2468999999999999976543 2323 344 6776553
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
-+.+++.++|.++++ +++.+++
T Consensus 330 -------~~~~~~~~~i~~l~~-~~~~~~~ 351 (375)
T cd03821 330 -------DDVDALAAALRRALE-LPQRLKA 351 (375)
T ss_pred -------CChHHHHHHHHHHHh-CHHHHHH
Confidence 244999999999998 5433333
No 71
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.39 E-value=0.00083 Score=67.73 Aligned_cols=80 Identities=13% Similarity=0.088 Sum_probs=56.5
Q ss_pred cCCCccccccCHH---HHhccCCcceEEec---CC-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 353 KGRGMICGWAPQK---EVLAHSAIGGFVSH---CG-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 353 ~~~~~v~~w~pq~---~iL~~~~~~~~i~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
.+++.+.+++|+. .+|..+++ ++.. -| -.+++||+++|+|+|+.-..+- ...+.+. +.|...+
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~----~e~i~~~-~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGGP----LETVVDG-ETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCCc----HHHhccC-CceEEeC---
Confidence 4677888999976 47888888 6632 12 2578999999999999755432 2233333 5676542
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDS 450 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~ 450 (489)
. +.++++++|.++++ ++
T Consensus 349 ------~-~~~~~a~~i~~l~~-~~ 365 (392)
T cd03805 349 ------P-TPEEFAEAMLKLAN-DP 365 (392)
T ss_pred ------C-CHHHHHHHHHHHHh-Ch
Confidence 3 78999999999998 44
No 72
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.36 E-value=0.00091 Score=66.11 Aligned_cols=81 Identities=21% Similarity=0.286 Sum_probs=58.2
Q ss_pred cCCCccccccCHHH---HhccCCcceEEec----------CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEE
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVSH----------CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAV 419 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~H----------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~ 419 (489)
.+++.+.+++|+.+ ++..+++ +|.- |.-+++.||+++|+|+|+.+..+ .. .+.+.-..|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~-~~----~~i~~~~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG-IP----ELVEDGETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC-cc----hhhhCCCceE
Confidence 36778889998654 7788998 5552 33478999999999999976532 22 2334414777
Q ss_pred EeeeccccCCCCccCHHHHHHHHHHHhcCCH
Q 011311 420 ELRLDYRRGTENHVMADELARAVGCVMDGDS 450 (489)
Q Consensus 420 ~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 450 (489)
.+. .-+.++++++|.++++ ++
T Consensus 308 ~~~---------~~~~~~l~~~i~~~~~-~~ 328 (355)
T cd03799 308 LVP---------PGDPEALADAIERLLD-DP 328 (355)
T ss_pred EeC---------CCCHHHHHHHHHHHHh-CH
Confidence 664 2388999999999998 54
No 73
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.31 E-value=0.0021 Score=63.62 Aligned_cols=144 Identities=18% Similarity=0.106 Sum_probs=78.9
Q ss_pred CceEEEeecCCc-CCCHHHHHHHHHHHhhc--CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHh-hhcCCCccccc
Q 011311 286 SSVVFLCFGSMG-SFGEEQIQEIASGLEKS--GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQE-RSKGRGMICGW 361 (489)
Q Consensus 286 ~~vV~vs~GS~~-~~~~~~~~~~~~al~~~--~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~v~~w 361 (489)
+..+++..|.+. ....+.+.+.+..+.+. +.++++ +|..... +.....+-..... ...+++.+.+|
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~i-vG~~~~~---------~~~~~~~~~~~~~~~~~~~v~~~g~ 253 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLI-VGDAQGR---------RFYYAELLELIKRLGLQDRVTFVGH 253 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEE-EECCccc---------chHHHHHHHHHHHcCCcceEEEcCC
Confidence 345666677765 33445566666666653 344443 3432100 0000000000000 12356777787
Q ss_pred cCH-HHHhccCCcceEEec--CC-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHH
Q 011311 362 APQ-KEVLAHSAIGGFVSH--CG-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADE 437 (489)
Q Consensus 362 ~pq-~~iL~~~~~~~~i~H--gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~ 437 (489)
.+. ..+|..+++..+-++ -| .+++.||+++|+|+|+.-..+ ....+ ..-+.|..++ .-+.++
T Consensus 254 ~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i-~~~~~g~~~~---------~~~~~~ 319 (355)
T cd03819 254 CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETV-RPGETGLLVP---------PGDAEA 319 (355)
T ss_pred cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHH-hCCCceEEeC---------CCCHHH
Confidence 543 458999998333331 23 359999999999999876543 22233 3314677765 348899
Q ss_pred HHHHHHHHhcCCHHHH
Q 011311 438 LARAVGCVMDGDSEVR 453 (489)
Q Consensus 438 l~~ai~~vl~~~~~~~ 453 (489)
++++|..++..+++.+
T Consensus 320 l~~~i~~~~~~~~~~~ 335 (355)
T cd03819 320 LAQALDQILSLLPEGR 335 (355)
T ss_pred HHHHHHHHHhhCHHHH
Confidence 9999976665344333
No 74
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.29 E-value=0.0018 Score=63.19 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=78.9
Q ss_pred hHHHHhhhcCCCCceEEEeecCCc----CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhH
Q 011311 274 DEIIRWLDDQPASSVVFLCFGSMG----SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQ 349 (489)
Q Consensus 274 ~~l~~~l~~~~~~~vV~vs~GS~~----~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 349 (489)
++..+-|.. ++.+.|+|=+-+.. ......+.++++.|++.+..+|...+.... ..+-+.+
T Consensus 168 ~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~--------------~~~~~~~- 231 (335)
T PF04007_consen 168 PEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ--------------RELFEKY- 231 (335)
T ss_pred hhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch--------------hhHHhcc-
Confidence 344444442 24467777766532 223345778999999988875554433210 0011111
Q ss_pred hhhcCCCccc-cccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 350 ERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 350 ~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+ +.+. .-+.-.++|.++++ +|+=|| ....||...|+|.|.+ +.++-...=+.+.+. |. ...
T Consensus 232 ----~-~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l~~------ 293 (335)
T PF04007_consen 232 ----G-VIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--LYH------ 293 (335)
T ss_pred ----C-ccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--eEe------
Confidence 1 2232 44555689999998 998777 7789999999999974 222211122334566 76 222
Q ss_pred CCCccCHHHHHHHHHHHhc
Q 011311 429 TENHVMADELARAVGCVMD 447 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~ 447 (489)
.-+.+++.+.|++.+.
T Consensus 294 ---~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 294 ---STDPDEIVEYVRKNLG 309 (335)
T ss_pred ---cCCHHHHHHHHHHhhh
Confidence 3467777776655443
No 75
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.28 E-value=0.0025 Score=63.00 Aligned_cols=81 Identities=19% Similarity=0.318 Sum_probs=57.1
Q ss_pred CCCccc-cccCHH---HHhccCCcceEE--ec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeee
Q 011311 354 GRGMIC-GWAPQK---EVLAHSAIGGFV--SH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRL 423 (489)
Q Consensus 354 ~~~~v~-~w~pq~---~iL~~~~~~~~i--~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 423 (489)
+++.+. .|+|+. .+++.+++ +| ++ |-.+++.||+++|+|+|+-+..+ ...+.+. +.|..+..
T Consensus 247 ~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~~ 318 (366)
T cd03822 247 DRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVPP 318 (366)
T ss_pred CcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEcC
Confidence 566666 458864 48888888 55 22 33568999999999999987765 2233344 67776653
Q ss_pred ccccCCCCccCHHHHHHHHHHHhcCCHHH
Q 011311 424 DYRRGTENHVMADELARAVGCVMDGDSEV 452 (489)
Q Consensus 424 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 452 (489)
-+.+++++++.++++ ++..
T Consensus 319 ---------~d~~~~~~~l~~l~~-~~~~ 337 (366)
T cd03822 319 ---------GDPAALAEAIRRLLA-DPEL 337 (366)
T ss_pred ---------CCHHHHHHHHHHHHc-ChHH
Confidence 368999999999998 5433
No 76
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.26 E-value=0.0024 Score=70.54 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=57.8
Q ss_pred CCCccccccCHHH---HhccCC--cceEEec---CC-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeec
Q 011311 354 GRGMICGWAPQKE---VLAHSA--IGGFVSH---CG-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLD 424 (489)
Q Consensus 354 ~~~~v~~w~pq~~---iL~~~~--~~~~i~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 424 (489)
+++.+.+++++.+ ++..++ ..+||.- =| -.+++||+++|+|+|+-...+=. -+++.-.-|+.++
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~-----EII~~g~nGlLVd-- 620 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPV-----DIHRVLDNGLLVD-- 620 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcH-----HHhccCCcEEEEC--
Confidence 5667778888765 566552 1127764 23 35899999999999998764411 1223314577665
Q ss_pred cccCCCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 425 YRRGTENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 425 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
.-+.+.|+++|.++++ ++..+++
T Consensus 621 -------P~D~eaLA~AL~~LL~-Dpelr~~ 643 (1050)
T TIGR02468 621 -------PHDQQAIADALLKLVA-DKQLWAE 643 (1050)
T ss_pred -------CCCHHHHHHHHHHHhh-CHHHHHH
Confidence 3478999999999998 6544443
No 77
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.24 E-value=0.00012 Score=71.86 Aligned_cols=104 Identities=21% Similarity=0.208 Sum_probs=67.4
Q ss_pred HHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccC--cchhhHHHHHHHH--hhCeEEEeee-----c-cccCCCCcc
Q 011311 364 QKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPI--YAEQQINAFQMVR--DLGLAVELRL-----D-YRRGTENHV 433 (489)
Q Consensus 364 q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~--~~DQ~~na~~v~~--~~G~G~~l~~-----~-~~~~~~~~~ 433 (489)
-.+++..+++ .|+-+|..|+ |+..+|+|||+ ++ ..-|+.||++++. ..|+.-.+-. . ..+--++.+
T Consensus 229 ~~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~ 304 (347)
T PRK14089 229 THKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFV 304 (347)
T ss_pred HHHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccC
Confidence 3569999999 9999999999 99999999999 55 3578999999872 1244422210 0 000012379
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 011311 434 MADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATG 478 (489)
Q Consensus 434 ~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 478 (489)
|++.|.+++.+ . .+++.++..+.+++.++. |++.+..+
T Consensus 305 t~~~la~~i~~-~-----~~~~~~~~~~~l~~~l~~-~a~~~~A~ 342 (347)
T PRK14089 305 TVENLLKAYKE-M-----DREKFFKKSKELREYLKH-GSAKNVAK 342 (347)
T ss_pred CHHHHHHHHHH-H-----HHHHHHHHHHHHHHHhcC-CHHHHHHH
Confidence 99999999977 2 334444444455554443 55554443
No 78
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.14 E-value=0.0012 Score=65.83 Aligned_cols=131 Identities=15% Similarity=0.289 Sum_probs=76.6
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhhc--CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHh--hhcCCCcccccc
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEKS--GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQE--RSKGRGMICGWA 362 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~~--~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~v~~w~ 362 (489)
+.+++..|.+.......+..+++++... +.+++ .+|... +.+. + ....+ ..++++.+.+|+
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~-ivG~g~---------~~~~----l-~~~~~~~~l~~~v~f~G~~ 244 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLH-IIGDGS---------DFEK----C-KAYSRELGIEQRIIWHGWQ 244 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEE-EEeCCc---------cHHH----H-HHHHHHcCCCCeEEEeccc
Confidence 3556667776432333466677777654 33444 344331 1111 1 01111 123677778887
Q ss_pred CH--H---HHhccCCcceEEec----CCchhHHHHHHhCCcEEecc-CcchhhHHHHHHHHhhCeEEEeeeccccCCCCc
Q 011311 363 PQ--K---EVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWP-IYAEQQINAFQMVRDLGLAVELRLDYRRGTENH 432 (489)
Q Consensus 363 pq--~---~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P-~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 432 (489)
++ . +.+..+++ +|.. |--.++.||+++|+|+|+.- ..+ .. .++..-..|..++ .
T Consensus 245 ~~~~~~~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g-~~----eiv~~~~~G~lv~---------~ 308 (359)
T PRK09922 245 SQPWEVVQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG-PR----DIIKPGLNGELYT---------P 308 (359)
T ss_pred CCcHHHHHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC-hH----HHccCCCceEEEC---------C
Confidence 53 2 34556777 6643 33579999999999999976 433 11 2334314576664 3
Q ss_pred cCHHHHHHHHHHHhcC
Q 011311 433 VMADELARAVGCVMDG 448 (489)
Q Consensus 433 ~~~~~l~~ai~~vl~~ 448 (489)
-+.++++++|.+++++
T Consensus 309 ~d~~~la~~i~~l~~~ 324 (359)
T PRK09922 309 GNIDEFVGKLNKVISG 324 (359)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 4899999999999983
No 79
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.13 E-value=0.00079 Score=67.09 Aligned_cols=83 Identities=22% Similarity=0.221 Sum_probs=60.9
Q ss_pred cCCCccccccCHHH---HhccCCcceEEec----------CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEE
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVSH----------CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAV 419 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~H----------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~ 419 (489)
.+++.+.+++|+.+ +|..+++ +|.- |-.+++.||+++|+|+|+-+..+ ++..+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecC-CeeE
Confidence 46677789998754 6889998 5532 23578999999999999877654 44444444 7787
Q ss_pred EeeeccccCCCCccCHHHHHHHHHHHhcCCHHH
Q 011311 420 ELRLDYRRGTENHVMADELARAVGCVMDGDSEV 452 (489)
Q Consensus 420 ~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 452 (489)
.++ .-+.++++++|.++++ +++.
T Consensus 317 ~~~---------~~d~~~l~~~i~~l~~-~~~~ 339 (367)
T cd05844 317 LVP---------EGDVAALAAALGRLLA-DPDL 339 (367)
T ss_pred EEC---------CCCHHHHHHHHHHHHc-CHHH
Confidence 665 3478999999999998 5543
No 80
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.12 E-value=0.0067 Score=61.46 Aligned_cols=76 Identities=16% Similarity=0.223 Sum_probs=53.4
Q ss_pred CCCccccccCHHH---HhccCCcceEEec---CCc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 354 GRGMICGWAPQKE---VLAHSAIGGFVSH---CGW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 354 ~~~~v~~w~pq~~---iL~~~~~~~~i~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
+++.+.+|+|+.+ +|+.+++ +|.- -|. .++.||+++|+|+|+-+..+- ... .+. |.+...
T Consensus 250 ~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~----~e~-i~~-~~~~~~----- 316 (398)
T cd03796 250 DRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI----PEV-LPP-DMILLA----- 316 (398)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCCc----hhh-eeC-Cceeec-----
Confidence 5677789998654 8888998 6542 243 399999999999999777532 222 344 444322
Q ss_pred cCCCCccCHHHHHHHHHHHhc
Q 011311 427 RGTENHVMADELARAVGCVMD 447 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~ 447 (489)
..+.+++++++.++++
T Consensus 317 -----~~~~~~l~~~l~~~l~ 332 (398)
T cd03796 317 -----EPDVESIVRKLEEAIS 332 (398)
T ss_pred -----CCCHHHHHHHHHHHHh
Confidence 2278999999999997
No 81
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.12 E-value=0.0026 Score=62.39 Aligned_cols=126 Identities=17% Similarity=0.153 Sum_probs=75.9
Q ss_pred EEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhh--hcCCCccccccCHHH
Q 011311 289 VFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQER--SKGRGMICGWAPQKE 366 (489)
Q Consensus 289 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~v~~w~pq~~ 366 (489)
+.+..|... .......+++++++.+.++++.-.+.. . ..+-...... ..+++.+.+++++.+
T Consensus 173 ~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~~----------~----~~~~~~~~~~~~~~~~v~~~G~~~~~~ 236 (335)
T cd03802 173 YLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVSD----------P----DYFYREIAPELLDGPDIEYLGEVGGAE 236 (335)
T ss_pred EEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCCC----------H----HHHHHHHHHhcccCCcEEEeCCCCHHH
Confidence 344466653 233356677788888888765433221 0 0000011111 246778889999754
Q ss_pred ---HhccCCcceEEe--cCCc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhC-eEEEeeeccccCCCCccCHHHHH
Q 011311 367 ---VLAHSAIGGFVS--HCGW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLG-LAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 367 ---iL~~~~~~~~i~--HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
+++.+++.++-+ +-|+ .++.||+++|+|+|+....+ +... ++. | .|...+ . .++++
T Consensus 237 ~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~-i~~-~~~g~l~~---------~--~~~l~ 299 (335)
T cd03802 237 KAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEV-VED-GVTGFLVD---------S--VEELA 299 (335)
T ss_pred HHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhh-eeC-CCcEEEeC---------C--HHHHH
Confidence 688888833333 2343 48999999999999887643 2222 344 4 566542 3 89999
Q ss_pred HHHHHHhc
Q 011311 440 RAVGCVMD 447 (489)
Q Consensus 440 ~ai~~vl~ 447 (489)
++|.++++
T Consensus 300 ~~l~~l~~ 307 (335)
T cd03802 300 AAVARADR 307 (335)
T ss_pred HHHHHHhc
Confidence 99988876
No 82
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.11 E-value=0.0016 Score=64.45 Aligned_cols=200 Identities=20% Similarity=0.210 Sum_probs=109.0
Q ss_pred CCEEEec-ccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHH-HHHHHHHHhh-----cCCeEE
Q 011311 247 PPVYNVG-PMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQ-IQEIASGLEK-----SGVRFL 319 (489)
Q Consensus 247 p~~~~vG-p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~-~~~~~~al~~-----~~~~~v 319 (489)
-++.||| |+...... .....+..+.+ -.+++++|-+--||-.. .... +..++++.+. .+.+|+
T Consensus 153 ~~~~~VGHPl~d~~~~--------~~~~~~~~~~~-l~~~~~iIaLLPGSR~~-EI~rllP~~l~aa~~l~~~~p~l~fv 222 (373)
T PF02684_consen 153 VPVTYVGHPLLDEVKP--------EPDRAEAREKL-LDPDKPIIALLPGSRKS-EIKRLLPIFLEAAKLLKKQRPDLQFV 222 (373)
T ss_pred CCeEEECCcchhhhcc--------CCCHHHHHHhc-CCCCCcEEEEeCCCCHH-HHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 4699999 76654331 12233333333 22356789998999331 1111 2334555432 356776
Q ss_pred EEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-cccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 320 WSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 320 w~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
+..-... .++ .+ .........++.+. ..-.-.+++..+++ .+.-.| ..|+|+...|+|||++
T Consensus 223 vp~a~~~----------~~~---~i-~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~ 285 (373)
T PF02684_consen 223 VPVAPEV----------HEE---LI-EEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVA 285 (373)
T ss_pred EecCCHH----------HHH---HH-HHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEE
Confidence 6543321 000 00 00000111122222 22245568888887 665555 4588999999999986
Q ss_pred cC-cchhhHHHHHHHHhhCeEEEeeeccccC-----CCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCC
Q 011311 399 PI-YAEQQINAFQMVRDLGLAVELRLDYRRG-----TENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGS 472 (489)
Q Consensus 399 P~-~~DQ~~na~~v~~~~G~G~~l~~~~~~~-----~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~ 472 (489)
=- ..=-+..|++++..-=+|+. +.--.+. =++.+|++.|.+++.++++ |+..++..+...+.+++..+.|.+
T Consensus 286 Yk~~~lt~~iak~lvk~~~isL~-Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~ 363 (373)
T PF02684_consen 286 YKVSPLTYFIAKRLVKVKYISLP-NIIAGREVVPELIQEDATPENIAAELLELLE-NPEKRKKQKELFREIRQLLGPGAS 363 (373)
T ss_pred EcCcHHHHHHHHHhhcCCEeech-hhhcCCCcchhhhcccCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhhhhccC
Confidence 43 33445667776543112211 0000000 0237899999999999999 665577777777777777666666
Q ss_pred hHH
Q 011311 473 SYA 475 (489)
Q Consensus 473 ~~~ 475 (489)
+..
T Consensus 364 ~~~ 366 (373)
T PF02684_consen 364 SRA 366 (373)
T ss_pred CHH
Confidence 544
No 83
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.09 E-value=0.0074 Score=59.75 Aligned_cols=84 Identities=11% Similarity=0.071 Sum_probs=57.4
Q ss_pred CCCccccccCH-HHHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQ-KEVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq-~~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+.++..+ ..++..+++ +|.- |-.++++||+++|+|+|+-...+-.. . ... +.|....
T Consensus 249 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~----~-i~~-~~~~~~~------ 314 (358)
T cd03812 249 DKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTITKEV----D-LTD-LVKFLSL------ 314 (358)
T ss_pred CcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCchhh----h-hcc-CccEEeC------
Confidence 56666676544 458999998 5543 44679999999999999876654322 2 344 5555443
Q ss_pred CCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 429 TENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
.-+.++++++|.++++ ++..+++
T Consensus 315 ---~~~~~~~a~~i~~l~~-~~~~~~~ 337 (358)
T cd03812 315 ---DESPEIWAEEILKLKS-EDRRERS 337 (358)
T ss_pred ---CCCHHHHHHHHHHHHh-Ccchhhh
Confidence 2357999999999998 5544433
No 84
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.04 E-value=0.0093 Score=58.99 Aligned_cols=87 Identities=15% Similarity=0.112 Sum_probs=57.2
Q ss_pred CCCccccccCH-HHHhccCCcceEEecCC----chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQ-KEVLAHSAIGGFVSHCG----WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq-~~iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+.++..+ ..+|..+++ +|.-.. .+++.||+++|+|+|+.. ...+...+.+ .|. .+.
T Consensus 245 ~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i~~-~g~--~~~------ 309 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVATD----AGGVREVVGD-SGL--IVP------ 309 (360)
T ss_pred CcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEec----CCChhhEecC-Cce--EeC------
Confidence 46667776654 468999998 554332 568999999999999754 3344434333 244 333
Q ss_pred CCCccCHHHHHHHHHHHhcCCHHHHHHHHH
Q 011311 429 TENHVMADELARAVGCVMDGDSEVRKRVKE 458 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~ 458 (489)
.-+.+++++++.+++++++.+++...+
T Consensus 310 ---~~~~~~~~~~i~~ll~~~~~~~~~~~~ 336 (360)
T cd04951 310 ---ISDPEALANKIDEILKMSGEERDIIGA 336 (360)
T ss_pred ---CCCHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 347889999999998535555544333
No 85
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.01 E-value=0.02 Score=56.72 Aligned_cols=106 Identities=21% Similarity=0.233 Sum_probs=61.8
Q ss_pred cCCCccccccCHHH---HhccCCcceEEecCCc-----hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeec
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVSHCGW-----NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLD 424 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~HgG~-----~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 424 (489)
.+++.+.+|+++.+ ++..+++ ++.+.-. +++.||+++|+|+|+....+... . .+. .|......
T Consensus 247 ~~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e----~-~~~--~g~~~~~~ 317 (363)
T cd04955 247 DPRIIFVGPIYDQELLELLRYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNRE----V-LGD--KAIYFKVG 317 (363)
T ss_pred CCcEEEccccChHHHHHHHHhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCccce----e-ecC--CeeEecCc
Confidence 46778889999864 6667777 5554433 47999999999999876543211 1 121 23333211
Q ss_pred cccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 425 YRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 425 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
+ .++++|.++++ ++..+.+ +++..++...+.-+-....+++++
T Consensus 318 ---------~--~l~~~i~~l~~-~~~~~~~---~~~~~~~~~~~~fs~~~~~~~~~~ 360 (363)
T cd04955 318 ---------D--DLASLLEELEA-DPEEVSA---MAKAARERIREKYTWEKIADQYEE 360 (363)
T ss_pred ---------h--HHHHHHHHHHh-CHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 1 29999999998 5433322 333333333333444455555554
No 86
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.00 E-value=0.016 Score=57.19 Aligned_cols=85 Identities=25% Similarity=0.299 Sum_probs=63.6
Q ss_pred CCccccccC-HHHHhccCCc----ceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCC
Q 011311 355 RGMICGWAP-QKEVLAHSAI----GGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGT 429 (489)
Q Consensus 355 ~~~v~~w~p-q~~iL~~~~~----~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 429 (489)
++++.+-+- ...+++-+++ |-|+-+||+| .+|.+++|+|+|.=|+..-|..-++++.+. |.|+.++
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~-ga~~~v~------- 371 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQA-GAGLQVE------- 371 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhc-CCeEEEC-------
Confidence 344444443 2345555554 3356699998 899999999999999999999999999887 9998875
Q ss_pred CCccCHHHHHHHHHHHhcCCHHHH
Q 011311 430 ENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 430 ~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
+++.+.+++..++. |+..|
T Consensus 372 ----~~~~l~~~v~~l~~-~~~~r 390 (419)
T COG1519 372 ----DADLLAKAVELLLA-DEDKR 390 (419)
T ss_pred ----CHHHHHHHHHHhcC-CHHHH
Confidence 37888888877776 55333
No 87
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.00 E-value=0.0045 Score=60.34 Aligned_cols=84 Identities=20% Similarity=0.147 Sum_probs=54.4
Q ss_pred CCCccccccCHH-HHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQK-EVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq~-~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+.+|.+.. .++..+++ +|.- |.-+++.||+++|+|+|+-... .....+.+. +.|...+.
T Consensus 246 ~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~----- 313 (353)
T cd03811 246 DRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVPV----- 313 (353)
T ss_pred ccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEECC-----
Confidence 566667777653 58999998 5532 3356899999999999986554 334344444 77877653
Q ss_pred CCCccCHHHH---HHHHHHHhcCCHHHHH
Q 011311 429 TENHVMADEL---ARAVGCVMDGDSEVRK 454 (489)
Q Consensus 429 ~~~~~~~~~l---~~ai~~vl~~~~~~~~ 454 (489)
-+.+.+ .+++.++.+ ++..++
T Consensus 314 ----~~~~~~~~~~~~i~~~~~-~~~~~~ 337 (353)
T cd03811 314 ----GDEAALAAAALALLDLLL-DPELRE 337 (353)
T ss_pred ----CCHHHHHHHHHHHHhccC-ChHHHH
Confidence 366676 555655555 443333
No 88
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.98 E-value=0.0019 Score=64.58 Aligned_cols=157 Identities=15% Similarity=0.233 Sum_probs=89.1
Q ss_pred CceEEEeecCCc---CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCcccccc
Q 011311 286 SSVVFLCFGSMG---SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWA 362 (489)
Q Consensus 286 ~~vV~vs~GS~~---~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~ 362 (489)
++.|+|++=... ....+.+.+++++|.+.+.++++...... |.+ ....+.+ ..+..+ .+++.+.+-+
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~-------p~~-~~i~~~i-~~~~~~-~~~v~l~~~l 270 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNAD-------AGS-RIINEAI-EEYVNE-HPNFRLFKSL 270 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCC-------CCc-hHHHHHH-HHHhcC-CCCEEEECCC
Confidence 468778775432 33456799999999888766666543221 000 0000011 111101 2566776655
Q ss_pred C---HHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHH
Q 011311 363 P---QKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 363 p---q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
+ ...++.++++ +||-++.+- .||.+.|+|+|.+- .-|. ..+. |..+.+- ..++++|.
T Consensus 271 ~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~--~R~e-----~~~~-g~nvl~v---------g~~~~~I~ 330 (365)
T TIGR03568 271 GQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG--TRQK-----GRLR-ADSVIDV---------DPDKEEIV 330 (365)
T ss_pred ChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec--CCch-----hhhh-cCeEEEe---------CCCHHHHH
Confidence 4 4558899998 998886554 99999999999774 1111 1233 4333211 35789999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 011311 440 RAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATG 478 (489)
Q Consensus 440 ~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 478 (489)
+++.++++ +.++++ +.. ...-.++|.++.+.++
T Consensus 331 ~a~~~~~~--~~~~~~---~~~-~~~pygdg~as~rI~~ 363 (365)
T TIGR03568 331 KAIEKLLD--PAFKKS---LKN-VKNPYGDGNSSERIIE 363 (365)
T ss_pred HHHHHHhC--hHHHHH---Hhh-CCCCCCCChHHHHHHH
Confidence 99998654 333322 111 1222366777776554
No 89
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=97.83 E-value=0.076 Score=57.59 Aligned_cols=77 Identities=16% Similarity=0.093 Sum_probs=48.9
Q ss_pred CCCcccccc-CH---HHHhcc----CCcceEEec---CC-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEe
Q 011311 354 GRGMICGWA-PQ---KEVLAH----SAIGGFVSH---CG-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVEL 421 (489)
Q Consensus 354 ~~~~v~~w~-pq---~~iL~~----~~~~~~i~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l 421 (489)
+++.+.++. +. .+++.+ +++ ||.= =| -.+++||+++|+|+|+--..+ .+..|.+. .-|..+
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adV--fV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV~dg-~tGfLV 691 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGI--FVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEIIQDG-VSGFHI 691 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcE--EEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEe
Confidence 556665653 32 245543 234 6642 22 348999999999999976654 33333343 568777
Q ss_pred eeccccCCCCccCHHHHHHHHHHHh
Q 011311 422 RLDYRRGTENHVMADELARAVGCVM 446 (489)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~ai~~vl 446 (489)
+. -+.++++++|.+++
T Consensus 692 dp---------~D~eaLA~aL~~ll 707 (784)
T TIGR02470 692 DP---------YHGEEAAEKIVDFF 707 (784)
T ss_pred CC---------CCHHHHHHHHHHHH
Confidence 53 37889999998876
No 90
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.71 E-value=0.016 Score=57.13 Aligned_cols=90 Identities=18% Similarity=0.220 Sum_probs=59.5
Q ss_pred cCCCccccccCHH---HHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 353 KGRGMICGWAPQK---EVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 353 ~~~~~v~~w~pq~---~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
.+++.+.+|+|+. .+|..+++ +|.- +..+++.||+++|+|+|+-...+ .... .. ..|..+.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~-~~--~~~~~~~--- 319 (365)
T cd03809 252 GDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEV-AG--DAALYFD--- 319 (365)
T ss_pred CCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----ccce-ec--CceeeeC---
Confidence 4677788999876 47888887 4422 23458999999999999865522 1111 12 2344443
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSE 461 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~ 461 (489)
.-+.+++.++|.++++ |+..+.+..+-+.
T Consensus 320 ------~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~ 348 (365)
T cd03809 320 ------PLDPEALAAAIERLLE-DPALREELRERGL 348 (365)
T ss_pred ------CCCHHHHHHHHHHHhc-CHHHHHHHHHHHH
Confidence 3378999999999998 6666555444443
No 91
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.71 E-value=0.069 Score=53.61 Aligned_cols=82 Identities=22% Similarity=0.252 Sum_probs=52.6
Q ss_pred cccCHH---HHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCc
Q 011311 360 GWAPQK---EVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENH 432 (489)
Q Consensus 360 ~w~pq~---~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 432 (489)
+++++. .++..+++ ||.= +.-.+++||+++|+|+|+-...+ ....+.+. +.|..++.... +..
T Consensus 267 ~~~~~~~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~----~~e~i~~~-~~G~~~~~~~~---~~~ 336 (388)
T TIGR02149 267 KMLPKEELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATGG----IPEVVVDG-ETGFLVPPDNS---DAD 336 (388)
T ss_pred CCCCHHHHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCCC----HHHHhhCC-CceEEcCCCCC---ccc
Confidence 677754 47889998 6642 22357799999999999976532 33343333 56877754300 001
Q ss_pred cCHHHHHHHHHHHhcCCHHH
Q 011311 433 VMADELARAVGCVMDGDSEV 452 (489)
Q Consensus 433 ~~~~~l~~ai~~vl~~~~~~ 452 (489)
-..+++.++|.++++ ++..
T Consensus 337 ~~~~~l~~~i~~l~~-~~~~ 355 (388)
T TIGR02149 337 GFQAELAKAINILLA-DPEL 355 (388)
T ss_pred chHHHHHHHHHHHHh-CHHH
Confidence 123899999999998 5533
No 92
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.69 E-value=0.073 Score=53.24 Aligned_cols=82 Identities=22% Similarity=0.133 Sum_probs=55.3
Q ss_pred CCCccccccCH-HHHhccCCcceEE--ec--CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQ-KEVLAHSAIGGFV--SH--CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq-~~iL~~~~~~~~i--~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+.++..+ ..+|..+++ +| ++ |--++++||+++|+|+|+-...+ +... ++.-..|..++.
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~-i~~~~~g~~~~~----- 322 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPEL-VQHGVTGALVPP----- 322 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHH-hcCCCceEEeCC-----
Confidence 34444454433 468999998 65 33 44569999999999999977643 3323 333246766653
Q ss_pred CCCccCHHHHHHHHHHHhcCCHHH
Q 011311 429 TENHVMADELARAVGCVMDGDSEV 452 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~~~ 452 (489)
-+.++++++|.++++ ++..
T Consensus 323 ----~d~~~la~~i~~l~~-~~~~ 341 (374)
T TIGR03088 323 ----GDAVALARALQPYVS-DPAA 341 (374)
T ss_pred ----CCHHHHHHHHHHHHh-CHHH
Confidence 378999999999998 5533
No 93
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.67 E-value=0.0016 Score=66.22 Aligned_cols=111 Identities=19% Similarity=0.203 Sum_probs=72.7
Q ss_pred CCCccccccCHHH---HhccCCcceEEecCC----chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 354 GRGMICGWAPQKE---VLAHSAIGGFVSHCG----WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 354 ~~~~v~~w~pq~~---iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
+++.+.+|+++.+ ++..+++.+||...- -++++||+++|+|+|+-...+ .... ++.-+.|..+..
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~-i~~~~~G~l~~~--- 360 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEI-VDNGGNGLLLSK--- 360 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHH-hcCCCcEEEeCC---
Confidence 4567779999765 555444434776553 468999999999999865443 3334 455137876642
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 011311 427 RGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLI 481 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 481 (489)
.-+.++++++|.++++ |+..++ ++++..++.+.+.=+.....++|+
T Consensus 361 -----~~~~~~la~~I~~ll~-~~~~~~---~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 361 -----DPTPNELVSSLSKFID-NEEEYQ---TMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred -----CCCHHHHHHHHHHHHh-CHHHHH---HHHHHHHHHHHHHcCHHHhHHHhc
Confidence 3478999999999998 654433 345555555555566666666664
No 94
>PLN02275 transferase, transferring glycosyl groups
Probab=97.66 E-value=0.08 Score=53.07 Aligned_cols=75 Identities=17% Similarity=0.198 Sum_probs=50.8
Q ss_pred CCCccc-cccCHHH---HhccCCcceEEe-c---CC---chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEee
Q 011311 354 GRGMIC-GWAPQKE---VLAHSAIGGFVS-H---CG---WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELR 422 (489)
Q Consensus 354 ~~~~v~-~w~pq~~---iL~~~~~~~~i~-H---gG---~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~ 422 (489)
+|+.+. .|+|+.+ +|+.+++ ||. + -| -+++.||+++|+|+|+....+ +... ++.-+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg----~~ei-v~~g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IGEL-VKDGKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCCC----hHHH-ccCCCCeEEEC
Confidence 344544 4788765 5999999 663 1 12 357999999999999975432 3433 44425787652
Q ss_pred eccccCCCCccCHHHHHHHHHHHh
Q 011311 423 LDYRRGTENHVMADELARAVGCVM 446 (489)
Q Consensus 423 ~~~~~~~~~~~~~~~l~~ai~~vl 446 (489)
+.++++++|.+++
T Consensus 359 -----------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -----------SSSELADQLLELL 371 (371)
T ss_pred -----------CHHHHHHHHHHhC
Confidence 4788999998764
No 95
>PLN00142 sucrose synthase
Probab=97.63 E-value=0.14 Score=55.77 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=47.4
Q ss_pred ccCHHHHhc----cCCcceEEec---CCch-hHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCc
Q 011311 361 WAPQKEVLA----HSAIGGFVSH---CGWN-SILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENH 432 (489)
Q Consensus 361 w~pq~~iL~----~~~~~~~i~H---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 432 (489)
..+..+++. .+++ ||.- =|.| +++||+++|+|+|+-...+ .... +..-.-|..++.
T Consensus 653 ~~~~~eLyr~iadaaDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EI-V~dG~tG~LV~P--------- 716 (815)
T PLN00142 653 RVRNGELYRYIADTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEI-IVDGVSGFHIDP--------- 716 (815)
T ss_pred cccHHHHHHHHHhhCCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHH-hcCCCcEEEeCC---------
Confidence 344445554 2345 7653 3444 8999999999999976544 3333 344145777653
Q ss_pred cCHHHHHHHHHHHh----cCCHHHHHH
Q 011311 433 VMADELARAVGCVM----DGDSEVRKR 455 (489)
Q Consensus 433 ~~~~~l~~ai~~vl----~~~~~~~~~ 455 (489)
-+.++++++|.+++ + |+..+++
T Consensus 717 ~D~eaLA~aI~~lLekLl~-Dp~lr~~ 742 (815)
T PLN00142 717 YHGDEAANKIADFFEKCKE-DPSYWNK 742 (815)
T ss_pred CCHHHHHHHHHHHHHHhcC-CHHHHHH
Confidence 36788888876654 5 5544433
No 96
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.58 E-value=0.00044 Score=68.70 Aligned_cols=134 Identities=13% Similarity=0.160 Sum_probs=84.0
Q ss_pred EEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHH---
Q 011311 289 VFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQK--- 365 (489)
Q Consensus 289 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~--- 365 (489)
.++..|++. ....+..++++++..+.++++. |... . .+.+.+...+|+.+.+|+|+.
T Consensus 197 ~il~~G~~~--~~K~~~~li~a~~~~~~~l~iv-G~g~---------~--------~~~l~~~~~~~V~~~g~~~~~~~~ 256 (351)
T cd03804 197 YYLSVGRLV--PYKRIDLAIEAFNKLGKRLVVI-GDGP---------E--------LDRLRAKAGPNVTFLGRVSDEELR 256 (351)
T ss_pred EEEEEEcCc--cccChHHHHHHHHHCCCcEEEE-ECCh---------h--------HHHHHhhcCCCEEEecCCCHHHHH
Confidence 344567754 2234666778887777776654 4321 0 011222345788889999985
Q ss_pred HHhccCCcceEEecCCc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHH
Q 011311 366 EVLAHSAIGGFVSHCGW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGC 444 (489)
Q Consensus 366 ~iL~~~~~~~~i~HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~ 444 (489)
.+|..+++-++-+.-|+ .++.||+++|+|+|+....+- ...+.+. +.|+.++. -+.++++++|.+
T Consensus 257 ~~~~~ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~~----~e~i~~~-~~G~~~~~---------~~~~~la~~i~~ 322 (351)
T cd03804 257 DLYARARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGGA----LETVIDG-VTGILFEE---------QTVESLAAAVER 322 (351)
T ss_pred HHHHhCCEEEECCcCCCCchHHHHHHcCCCEEEeCCCCC----cceeeCC-CCEEEeCC---------CCHHHHHHHHHH
Confidence 47889998333234344 367899999999999875442 2233333 57877653 378899999999
Q ss_pred HhcCCH-HHHHHHH
Q 011311 445 VMDGDS-EVRKRVK 457 (489)
Q Consensus 445 vl~~~~-~~~~~a~ 457 (489)
+++ ++ .++++++
T Consensus 323 l~~-~~~~~~~~~~ 335 (351)
T cd03804 323 FEK-NEDFDPQAIR 335 (351)
T ss_pred HHh-CcccCHHHHH
Confidence 998 44 3444333
No 97
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.53 E-value=0.2 Score=54.11 Aligned_cols=93 Identities=23% Similarity=0.255 Sum_probs=62.4
Q ss_pred cCCCccccccCHH-HHhccCCcceEEe---cCC-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecccc
Q 011311 353 KGRGMICGWAPQK-EVLAHSAIGGFVS---HCG-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRR 427 (489)
Q Consensus 353 ~~~~~v~~w~pq~-~iL~~~~~~~~i~---HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 427 (489)
.+++.+.+|.++. .+|..+++ ||. +-| -++++||+++|+|+|+....+ .... +..-..|+.++..
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~Ei-V~dg~~GlLv~~~--- 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEA-VQEGVTGLTLPAD--- 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCCC----hHHH-ccCCCCEEEeCCC---
Confidence 3677777888764 48999998 664 344 568999999999999987643 2323 3441468777654
Q ss_pred CCCCccCHHHHHHHHHHHhcC---CHHHHHHHHHH
Q 011311 428 GTENHVMADELARAVGCVMDG---DSEVRKRVKEV 459 (489)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl~~---~~~~~~~a~~l 459 (489)
+.+.+++++++.+++.. ++.+++++++.
T Consensus 643 ----d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~ 673 (694)
T PRK15179 643 ----TVTAPDVAEALARIHDMCAADPGIARKAADW 673 (694)
T ss_pred ----CCChHHHHHHHHHHHhChhccHHHHHHHHHH
Confidence 56677777777776641 45666655443
No 98
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.50 E-value=0.0054 Score=62.33 Aligned_cols=114 Identities=18% Similarity=0.151 Sum_probs=72.0
Q ss_pred cCCCccccccCHHH---HhccCCcceEEec---------CCc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEE
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVSH---------CGW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAV 419 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~H---------gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~ 419 (489)
.+++.+.+|+|+.+ +|..+++ ||.- =|. ++++||+++|+|+|+-...+ .... ++.-..|+
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~-v~~~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPEL-VEADKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhh-hcCCCceE
Confidence 36778889999864 7889998 6642 244 57899999999999976543 2223 34314677
Q ss_pred EeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 420 ELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 420 ~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
.++. -+.++++++|.++++.|++.+ +++++..++...+.=+.....+++.+-+.
T Consensus 351 lv~~---------~d~~~la~ai~~l~~~d~~~~---~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 351 LVPE---------NDAQALAQRLAAFSQLDTDEL---APVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred EeCC---------CCHHHHHHHHHHHHhCCHHHH---HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 6653 378999999999997334322 22333333333334444555555555443
No 99
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.50 E-value=0.0014 Score=57.73 Aligned_cols=87 Identities=25% Similarity=0.288 Sum_probs=60.9
Q ss_pred cCCCccccccCH---HHHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 353 KGRGMICGWAPQ---KEVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 353 ~~~~~v~~w~pq---~~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
.+++.+.+++++ ..++..+++ +|+. +...++.||+++|+|+|+.- ...+...+.+. +.|..++
T Consensus 72 ~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~-~~g~~~~--- 141 (172)
T PF00534_consen 72 KENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDG-VNGFLFD--- 141 (172)
T ss_dssp GTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTT-TSEEEES---
T ss_pred ccccccccccccccccccccccee--ccccccccccccccccccccccceeecc----ccCCceeeccc-cceEEeC---
Confidence 356777888883 348899998 7766 56779999999999999855 33344343343 6688775
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCHHHHHHH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDSEVRKRV 456 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a 456 (489)
.-+.++++++|.++++ +++++++.
T Consensus 142 ------~~~~~~l~~~i~~~l~-~~~~~~~l 165 (172)
T PF00534_consen 142 ------PNDIEELADAIEKLLN-DPELRQKL 165 (172)
T ss_dssp ------TTSHHHHHHHHHHHHH-HHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHC-CHHHHHHH
Confidence 3499999999999998 55444443
No 100
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.47 E-value=0.0029 Score=51.69 Aligned_cols=107 Identities=19% Similarity=0.211 Sum_probs=69.6
Q ss_pred EEEeecCCcCCCHHH---HHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccc--cC
Q 011311 289 VFLCFGSMGSFGEEQ---IQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGW--AP 363 (489)
Q Consensus 289 V~vs~GS~~~~~~~~---~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w--~p 363 (489)
+||+-||... +-.. ..++.+-.+.-..++|..+|.... .| +.+ ..+.+| -+
T Consensus 2 ifVTvGstf~-~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~----------------kp------vag-l~v~~F~~~~ 57 (161)
T COG5017 2 IFVTVGSTFY-PFNRLVLKIEVLELTELIQEELIVQYGNGDI----------------KP------VAG-LRVYGFDKEE 57 (161)
T ss_pred eEEEecCccc-hHHHHHhhHHHHHHHHHhhhheeeeecCCCc----------------cc------ccc-cEEEeechHH
Confidence 6899999741 1111 112333233345588999987521 12 001 133333 33
Q ss_pred H-HHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCc--------chhhHHHHHHHHhhCeEEEee
Q 011311 364 Q-KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIY--------AEQQINAFQMVRDLGLAVELR 422 (489)
Q Consensus 364 q-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~--------~DQ~~na~~v~~~~G~G~~l~ 422 (489)
. +.+...+++ +|+|||.||++.++..++|.|++|-- .+|-.-|..+++. +.=+...
T Consensus 58 kiQsli~darI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~-~~vv~~s 122 (161)
T COG5017 58 KIQSLIHDARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEI-NYVVACS 122 (161)
T ss_pred HHHHHhhcceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhc-CceEEEc
Confidence 3 346666777 99999999999999999999999953 4689999998876 7765554
No 101
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.44 E-value=0.0012 Score=66.87 Aligned_cols=154 Identities=27% Similarity=0.333 Sum_probs=81.8
Q ss_pred CCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHh--hhcCCCccccc
Q 011311 284 PASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQE--RSKGRGMICGW 361 (489)
Q Consensus 284 ~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~v~~w 361 (489)
+++.++|.||.+..-..++.+..-++-|++.+.-.+|..+.+.. . ...+-..+.. -.++++.+.++
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~---------~---~~~l~~~~~~~Gv~~~Ri~f~~~ 349 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS---------G---EARLRRRFAAHGVDPDRIIFSPV 349 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT---------H---HHHHHHHHHHTTS-GGGEEEEE-
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH---------H---HHHHHHHHHHcCCChhhEEEcCC
Confidence 34569999999998889999998899999999989998865420 0 0111111111 12356666677
Q ss_pred cCHHH---HhccCCcceEE---ecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCH
Q 011311 362 APQKE---VLAHSAIGGFV---SHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMA 435 (489)
Q Consensus 362 ~pq~~---iL~~~~~~~~i---~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~ 435 (489)
.++.+ .+..+++ ++ ..+|.+|++|||+.|||+|.+|--.=.-..++-+-..+|+.-.+- -+.
T Consensus 350 ~~~~ehl~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA----------~s~ 417 (468)
T PF13844_consen 350 APREEHLRRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA----------DSE 417 (468)
T ss_dssp --HHHHHHHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-----------SSH
T ss_pred CCHHHHHHHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC----------CCH
Confidence 77655 4455676 44 457899999999999999999965444444444445557763332 244
Q ss_pred HH-HHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011311 436 DE-LARAVGCVMDGDSEVRKRVKEVSEKARLA 466 (489)
Q Consensus 436 ~~-l~~ai~~vl~~~~~~~~~a~~l~~~~~~~ 466 (489)
++ +..|| ++-+ |.+++++ +++++++.
T Consensus 418 ~eYv~~Av-~La~-D~~~l~~---lR~~Lr~~ 444 (468)
T PF13844_consen 418 EEYVEIAV-RLAT-DPERLRA---LRAKLRDR 444 (468)
T ss_dssp HHHHHHHH-HHHH--HHHHHH---HHHHHHHH
T ss_pred HHHHHHHH-HHhC-CHHHHHH---HHHHHHHH
Confidence 44 55555 4555 5555433 44444443
No 102
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.44 E-value=0.04 Score=55.09 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=61.1
Q ss_pred CCCccccccCHH-HHhccCCcceEEec--CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 354 GRGMICGWAPQK-EVLAHSAIGGFVSH--CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 354 ~~~~v~~w~pq~-~iL~~~~~~~~i~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
+++.+.++.++. .++..+++-.+.++ |...+++||+++|+|+|+.....- ....+.+. ..|..++
T Consensus 261 ~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g---~~~~v~~~-~~G~lv~-------- 328 (372)
T cd04949 261 DYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYG---PSEIIEDG-ENGYLVP-------- 328 (372)
T ss_pred ceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCC---cHHHcccC-CCceEeC--------
Confidence 456666766654 58999998445554 335689999999999999754321 12233333 5677665
Q ss_pred CccCHHHHHHHHHHHhcCCH----HHHHHHHHH
Q 011311 431 NHVMADELARAVGCVMDGDS----EVRKRVKEV 459 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~----~~~~~a~~l 459 (489)
.-+.++++++|.++++ ++ ++++++++.
T Consensus 329 -~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~ 359 (372)
T cd04949 329 -KGDIEALAEAIIELLN-DPKLLQKFSEAAYEN 359 (372)
T ss_pred -CCcHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 3489999999999998 54 344444444
No 103
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.43 E-value=0.046 Score=53.42 Aligned_cols=202 Identities=18% Similarity=0.164 Sum_probs=103.9
Q ss_pred EEEec-ccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhh-----cCCeEEEEe
Q 011311 249 VYNVG-PMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEK-----SGVRFLWSL 322 (489)
Q Consensus 249 ~~~vG-p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~vw~~ 322 (489)
.+||| |+....+- ....+...+-+....+++++.+--||-.+-=...+..+.++... .+.+||.-+
T Consensus 158 ~~yVGHpl~d~i~~--------~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~ 229 (381)
T COG0763 158 CTYVGHPLADEIPL--------LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPL 229 (381)
T ss_pred eEEeCChhhhhccc--------cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 89999 55543321 23344455545444566799999999431101112223333332 357777665
Q ss_pred cCCCCCCCCCCCCCcccccccCChhhHhhhcCCC-cccccc-C-HH-HHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 323 RKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRG-MICGWA-P-QK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~-~v~~w~-p-q~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
-... ++. +-..+ ...+. ...-++ + +. .++..+++ .+.-+|-. ++|+..+|+|||+.
T Consensus 230 ~~~~----------~~~----~~~~~---~~~~~~~~~~~~~~~~~~~a~~~aD~--al~aSGT~-tLE~aL~g~P~Vv~ 289 (381)
T COG0763 230 VNAK----------YRR----IIEEA---LKWEVAGLSLILIDGEKRKAFAAADA--ALAASGTA-TLEAALAGTPMVVA 289 (381)
T ss_pred CcHH----------HHH----HHHHH---hhccccCceEEecCchHHHHHHHhhH--HHHhccHH-HHHHHHhCCCEEEE
Confidence 4331 000 00000 11111 111222 2 22 37888887 77777754 78999999999984
Q ss_pred cCc-chhhHHHHHHHHhhCeEEEeeeccccC-----CCCccCHHHHHHHHHHHhcCCH----HHHHHHHHHHHHHHHHHh
Q 011311 399 PIY-AEQQINAFQMVRDLGLAVELRLDYRRG-----TENHVMADELARAVGCVMDGDS----EVRKRVKEVSEKARLALR 468 (489)
Q Consensus 399 P~~-~DQ~~na~~v~~~~G~G~~l~~~~~~~-----~~~~~~~~~l~~ai~~vl~~~~----~~~~~a~~l~~~~~~~~~ 468 (489)
=-. .=-+..|++.+.-+=+++- +.--.+. =+..++++.|++++.+++. |+ .+++..+++.+. +.
T Consensus 290 Yk~~~it~~iak~lvk~~yisLp-NIi~~~~ivPEliq~~~~pe~la~~l~~ll~-~~~~~~~~~~~~~~l~~~----l~ 363 (381)
T COG0763 290 YKVKPITYFIAKRLVKLPYVSLP-NILAGREIVPELIQEDCTPENLARALEELLL-NGDRREALKEKFRELHQY----LR 363 (381)
T ss_pred EeccHHHHHHHHHhccCCcccch-HHhcCCccchHHHhhhcCHHHHHHHHHHHhc-ChHhHHHHHHHHHHHHHH----Hc
Confidence 211 1123345554443222210 0000000 0136899999999999998 44 344444444444 45
Q ss_pred cCCChHHHHHHHHHHH
Q 011311 469 DGGSSYAATGRLIEDL 484 (489)
Q Consensus 469 ~~g~~~~~~~~~~~~~ 484 (489)
.+++++...+.+++.+
T Consensus 364 ~~~~~e~aA~~vl~~~ 379 (381)
T COG0763 364 EDPASEIAAQAVLELL 379 (381)
T ss_pred CCcHHHHHHHHHHHHh
Confidence 5567777776666654
No 104
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.42 E-value=0.0088 Score=60.20 Aligned_cols=112 Identities=15% Similarity=0.169 Sum_probs=69.7
Q ss_pred cCCCccccccCHHH---HhccCCcceEEecC----Cc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeec
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVSHC----GW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLD 424 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~Hg----G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 424 (489)
..++.+.+++|+.+ +|+.+++ ||... |. .+++||+++|+|+|+....+ +...+.+. ..|..+..
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~-~~G~~l~~- 327 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEG-ITGYHLAE- 327 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccC-CceEEEeC-
Confidence 35667778998654 6899998 66433 32 57889999999999987643 23233333 46764431
Q ss_pred cccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011311 425 YRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDL 484 (489)
Q Consensus 425 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 484 (489)
..+.++++++|.++++ |+..+ ++++..++...+.=+-....+++.+-+
T Consensus 328 -------~~d~~~la~~I~~ll~-d~~~~----~~~~~ar~~~~~~fsw~~~a~~~~~~l 375 (380)
T PRK15484 328 -------PMTSDSIISDINRTLA-DPELT----QIAEQAKDFVFSKYSWEGVTQRFEEQI 375 (380)
T ss_pred -------CCCHHHHHHHHHHHHc-CHHHH----HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3589999999999998 65432 344444433333334444444444443
No 105
>PRK00654 glgA glycogen synthase; Provisional
Probab=97.36 E-value=0.086 Score=54.63 Aligned_cols=70 Identities=13% Similarity=0.159 Sum_probs=45.9
Q ss_pred HHhccCCcceEEec---CCch-hHHHHHHhCCcEEeccCcc--hhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHH
Q 011311 366 EVLAHSAIGGFVSH---CGWN-SILESVWFGVPIVTWPIYA--EQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 366 ~iL~~~~~~~~i~H---gG~~-s~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
.+++.+++ ||.- -|+| +.+||+++|+|.|+.-..+ |.-.+...-.+. +.|+.++ .-++++++
T Consensus 352 ~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~---------~~d~~~la 419 (466)
T PRK00654 352 RIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFD---------DFNAEDLL 419 (466)
T ss_pred HHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeC---------CCCHHHHH
Confidence 57899998 6642 3444 8899999999999875432 211111000122 6677765 34789999
Q ss_pred HHHHHHhc
Q 011311 440 RAVGCVMD 447 (489)
Q Consensus 440 ~ai~~vl~ 447 (489)
++|.++++
T Consensus 420 ~~i~~~l~ 427 (466)
T PRK00654 420 RALRRALE 427 (466)
T ss_pred HHHHHHHH
Confidence 99999875
No 106
>PLN02949 transferase, transferring glycosyl groups
Probab=97.33 E-value=0.26 Score=50.86 Aligned_cols=82 Identities=11% Similarity=0.026 Sum_probs=52.5
Q ss_pred cCCCccccccCHHH---HhccCCcceEEe---cCCch-hHHHHHHhCCcEEeccCcchhhHHHHHHHHh-hC-eEEEeee
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVS---HCGWN-SILESVWFGVPIVTWPIYAEQQINAFQMVRD-LG-LAVELRL 423 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~-~G-~G~~l~~ 423 (489)
.+++.+.+++|+.+ +|..+++ +|+ +=|+| ++.||+++|+|+|+....+--.. .+.+. -| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~e---IV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMD---IVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcce---eeecCCCCcccccC--
Confidence 46777889998664 7888887 663 22333 79999999999999875431101 01110 01 23221
Q ss_pred ccccCCCCccCHHHHHHHHHHHhcCCH
Q 011311 424 DYRRGTENHVMADELARAVGCVMDGDS 450 (489)
Q Consensus 424 ~~~~~~~~~~~~~~l~~ai~~vl~~~~ 450 (489)
. +.++++++|.+++++++
T Consensus 407 --------~-~~~~la~ai~~ll~~~~ 424 (463)
T PLN02949 407 --------T-TVEEYADAILEVLRMRE 424 (463)
T ss_pred --------C-CHHHHHHHHHHHHhCCH
Confidence 2 78999999999997333
No 107
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.19 E-value=0.17 Score=51.61 Aligned_cols=83 Identities=19% Similarity=0.139 Sum_probs=55.8
Q ss_pred cCCCccccccCHHH---HhccCCcceEEe-----cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHH---hhCeEEEe
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVS-----HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVR---DLGLAVEL 421 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~-----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~---~~G~G~~l 421 (489)
.+++.+.+++|+.+ +|..+++ +|+ |-| .++.||+++|+|+|+.-..+.-. -+++ .-..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp~~----~iv~~~~~g~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPLL----DIVVPWDGGPTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCCch----heeeccCCCCceEEe
Confidence 46778889998764 7888888 554 333 38899999999999866543211 1222 21466542
Q ss_pred eeccccCCCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 422 RLDYRRGTENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
. +.++++++|.+++++++..+
T Consensus 377 ----------~-d~~~la~ai~~ll~~~~~~~ 397 (419)
T cd03806 377 ----------S-TAEEYAEAIEKILSLSEEER 397 (419)
T ss_pred ----------C-CHHHHHHHHHHHHhCCHHHH
Confidence 2 78999999999998444333
No 108
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.11 E-value=0.0018 Score=54.41 Aligned_cols=79 Identities=23% Similarity=0.239 Sum_probs=49.2
Q ss_pred cCCCccccccCHH-HHhccCCcceEEecC---CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 353 KGRGMICGWAPQK-EVLAHSAIGGFVSHC---GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 353 ~~~~~v~~w~pq~-~iL~~~~~~~~i~Hg---G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
.+++.+.+|++.. +++..+++....+.. -.+++.|++++|+|+|+.+.. ....+... +.|..+ .
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~~-~~~~~~-~----- 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEED-GCGVLV-A----- 119 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE--T-----
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheeec-CCeEEE-C-----
Confidence 3578888888654 489999996655432 248999999999999998772 11122233 778766 2
Q ss_pred CCCccCHHHHHHHHHHHhc
Q 011311 429 TENHVMADELARAVGCVMD 447 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~ 447 (489)
-+++++.++|+++++
T Consensus 120 ----~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 120 ----NDPEELAEAIERLLN 134 (135)
T ss_dssp ----T-HHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHhc
Confidence 289999999999986
No 109
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.08 E-value=0.0047 Score=61.13 Aligned_cols=158 Identities=17% Similarity=0.206 Sum_probs=87.8
Q ss_pred CCCceEEEeecCCcCCC-H---HHHHHHHHHHhhc-CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCcc
Q 011311 284 PASSVVFLCFGSMGSFG-E---EQIQEIASGLEKS-GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMI 358 (489)
Q Consensus 284 ~~~~vV~vs~GS~~~~~-~---~~~~~~~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v 358 (489)
.+++.++|++=...... + .++.+++++|.+. +.++||.+.+.. .....+ .....+. +|+.+
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p------------~~~~~i-~~~l~~~-~~v~~ 243 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNP------------RGSDII-IEKLKKY-DNVRL 243 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-H------------HHHHHH-HHHHTT--TTEEE
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCc------------hHHHHH-HHHhccc-CCEEE
Confidence 45679999885544444 3 4566677777776 889999987431 000111 1111122 47777
Q ss_pred ccccCH---HHHhccCCcceEEecCCchhHH-HHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccC
Q 011311 359 CGWAPQ---KEVLAHSAIGGFVSHCGWNSIL-ESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVM 434 (489)
Q Consensus 359 ~~w~pq---~~iL~~~~~~~~i~HgG~~s~~-eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~ 434 (489)
+.-+++ ..+|.++++ +|+..| +++ ||.+.|+|+|.+=..++-+.- ... |..+.+ ..+
T Consensus 244 ~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRqe~----r~~-~~nvlv----------~~~ 304 (346)
T PF02350_consen 244 IEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQEG----RER-GSNVLV----------GTD 304 (346)
T ss_dssp E----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-HHH----HHT-TSEEEE----------TSS
T ss_pred ECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCHHH----Hhh-cceEEe----------CCC
Confidence 765654 458889998 999999 677 999999999999444443331 233 666543 468
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 011311 435 ADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGR 479 (489)
Q Consensus 435 ~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 479 (489)
.++|.+++.++++ +....++... ...-.++|.++.+.++-
T Consensus 305 ~~~I~~ai~~~l~-~~~~~~~~~~----~~npYgdG~as~rI~~~ 344 (346)
T PF02350_consen 305 PEAIIQAIEKALS-DKDFYRKLKN----RPNPYGDGNASERIVEI 344 (346)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHC----S--TT-SS-HHHHHHHH
T ss_pred HHHHHHHHHHHHh-ChHHHHhhcc----CCCCCCCCcHHHHHHHh
Confidence 9999999999998 4333333222 12224667676665543
No 110
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.93 E-value=0.031 Score=56.56 Aligned_cols=107 Identities=21% Similarity=0.206 Sum_probs=67.4
Q ss_pred CCCccccccCHH-HHhccCCcceEE--ec--CCc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecccc
Q 011311 354 GRGMICGWAPQK-EVLAHSAIGGFV--SH--CGW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRR 427 (489)
Q Consensus 354 ~~~~v~~w~pq~-~iL~~~~~~~~i--~H--gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 427 (489)
+++.+.+++++. .++..+++ || ++ .|. +.+.||+++|+|+|+-+...+.. .... |.|+.+.
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~----- 346 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA----- 346 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC-----
Confidence 567777888864 48999998 55 33 354 36999999999999988643321 1123 6676553
Q ss_pred CCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 428 GTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
-+.++++++|.++++ |+..+++ +++..++...+.-+-...++++.+
T Consensus 347 -----~~~~~la~ai~~ll~-~~~~~~~---~~~~ar~~v~~~fsw~~~~~~~~~ 392 (397)
T TIGR03087 347 -----ADPADFAAAILALLA-NPAEREE---LGQAARRRVLQHYHWPRNLARLDA 392 (397)
T ss_pred -----CCHHHHHHHHHHHHc-CHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 278999999999998 6544333 333333332223344444444443
No 111
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.91 E-value=0.54 Score=46.95 Aligned_cols=109 Identities=15% Similarity=0.208 Sum_probs=63.3
Q ss_pred CCCcccccc--CHH---HHhccCCcceEEecC---C-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeec
Q 011311 354 GRGMICGWA--PQK---EVLAHSAIGGFVSHC---G-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLD 424 (489)
Q Consensus 354 ~~~~v~~w~--pq~---~iL~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 424 (489)
+++.+.++. ++. .+++.+++ |+.-. | -.++.||+++|+|+|+-...+ ....+.+. ..|+..+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~-~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDG-ETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccC-CceEEeC--
Confidence 455666665 432 47888888 77543 2 349999999999999976543 12223232 4565432
Q ss_pred cccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011311 425 YRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDL 484 (489)
Q Consensus 425 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 484 (489)
+.++++.+|.++++ +++.++...+ ..++...+.-+-...++++++-+
T Consensus 323 ---------~~~~~a~~i~~ll~-~~~~~~~~~~---~a~~~~~~~~s~~~~~~~~~~~~ 369 (372)
T cd03792 323 ---------TVEEAAVRILYLLR-DPELRRKMGA---NAREHVRENFLITRHLKDYLYLI 369 (372)
T ss_pred ---------CcHHHHHHHHHHHc-CHHHHHHHHH---HHHHHHHHHcCHHHHHHHHHHHH
Confidence 35677889999998 5544443322 22222222334445555555443
No 112
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.78 E-value=0.44 Score=46.82 Aligned_cols=108 Identities=16% Similarity=0.226 Sum_probs=78.9
Q ss_pred CCccc---cccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCC
Q 011311 355 RGMIC---GWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTEN 431 (489)
Q Consensus 355 ~~~v~---~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~ 431 (489)
++.+. +|.+...++.++-+ ++|-.|. -.-||-..|+|.+++=..-++|. + ++. |.-+.+
T Consensus 263 ~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~-v~a-gt~~lv---------- 324 (383)
T COG0381 263 RVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---G-VEA-GTNILV---------- 324 (383)
T ss_pred cEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---c-eec-CceEEe----------
Confidence 45554 66778889999988 9999885 36899999999999999999998 3 355 665554
Q ss_pred ccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 432 HVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 432 ~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
..+.+.|.+++.++++ +++..+|.+....- .++|.+|.+.++-+.+...
T Consensus 325 g~~~~~i~~~~~~ll~-~~~~~~~m~~~~np----Ygdg~as~rIv~~l~~~~~ 373 (383)
T COG0381 325 GTDEENILDAATELLE-DEEFYERMSNAKNP----YGDGNASERIVEILLNYFD 373 (383)
T ss_pred CccHHHHHHHHHHHhh-ChHHHHHHhcccCC----CcCcchHHHHHHHHHHHhh
Confidence 3577999999999998 66565553333222 3666677777766665543
No 113
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.58 E-value=0.0086 Score=59.08 Aligned_cols=108 Identities=20% Similarity=0.297 Sum_probs=72.0
Q ss_pred CCCccccccCHHHH---hccCCcceEEec-------CCc------hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCe
Q 011311 354 GRGMICGWAPQKEV---LAHSAIGGFVSH-------CGW------NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGL 417 (489)
Q Consensus 354 ~~~~v~~w~pq~~i---L~~~~~~~~i~H-------gG~------~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 417 (489)
+|+.+.+|+|+.++ |.. +++++... +.+ +-+.+.+++|+|+|+++. ...+..|.+. ++
T Consensus 207 ~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~----~~~~~~V~~~-~~ 280 (333)
T PRK09814 207 ANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSK----AAIADFIVEN-GL 280 (333)
T ss_pred CCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCC----ccHHHHHHhC-Cc
Confidence 67788899998775 444 44333221 111 227788999999999754 4556565555 89
Q ss_pred EEEeeeccccCCCCccCHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 418 AVELRLDYRRGTENHVMADELARAVGCVMDGD-SEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 418 G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
|+.++ +.+++.+++.++..++ .+|++|+++++++++. |.--..+++++++
T Consensus 281 G~~v~-----------~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 281 GFVVD-----------SLEELPEIIDNITEEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred eEEeC-----------CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 98874 4578999998764311 2788999999998775 5555555555554
No 114
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.54 E-value=0.13 Score=53.34 Aligned_cols=86 Identities=23% Similarity=0.241 Sum_probs=58.3
Q ss_pred CCCccccccCHHHHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHh----hC-eEEEeeec
Q 011311 354 GRGMICGWAPQKEVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRD----LG-LAVELRLD 424 (489)
Q Consensus 354 ~~~~v~~w~pq~~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~----~G-~G~~l~~~ 424 (489)
+++.+.+...-.++|+.+++ +|.- |--++++||+++|+|+|+-... .....+.+. +| .|..++
T Consensus 354 ~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~~~elv~~~~~~~~g~~G~lv~-- 425 (475)
T cd03813 354 DNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDVG----SCRELIEGADDEALGPAGEVVP-- 425 (475)
T ss_pred CeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCCC----ChHHHhcCCcccccCCceEEEC--
Confidence 56777775566678999998 5533 3346899999999999995433 233333221 12 576665
Q ss_pred cccCCCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 425 YRRGTENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 425 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
.-+.++++++|.++++ |+..+++
T Consensus 426 -------~~d~~~la~ai~~ll~-~~~~~~~ 448 (475)
T cd03813 426 -------PADPEALARAILRLLK-DPELRRA 448 (475)
T ss_pred -------CCCHHHHHHHHHHHhc-CHHHHHH
Confidence 3478999999999998 6654444
No 115
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=96.49 E-value=0.077 Score=55.32 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=61.5
Q ss_pred CCCccccccCHHHHhccCCcceEEe---cCC-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCC
Q 011311 354 GRGMICGWAPQKEVLAHSAIGGFVS---HCG-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGT 429 (489)
Q Consensus 354 ~~~~v~~w~pq~~iL~~~~~~~~i~---HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 429 (489)
+++.+.++.+...++..+++ ||. .=| ..+++||+++|+|+|+.-..+- +... ++.-.-|..++.... .
T Consensus 376 ~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G---~~ei-I~~g~nG~lv~~~~~--~ 447 (500)
T TIGR02918 376 DYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNYG---NPTF-IEDNKNGYLIPIDEE--E 447 (500)
T ss_pred CeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCCC---CHHH-ccCCCCEEEEeCCcc--c
Confidence 55677788888889999998 664 233 4589999999999999765311 1223 333135666652100 0
Q ss_pred CCccC-HHHHHHHHHHHhcCCH---HHHHHHHHHHH
Q 011311 430 ENHVM-ADELARAVGCVMDGDS---EVRKRVKEVSE 461 (489)
Q Consensus 430 ~~~~~-~~~l~~ai~~vl~~~~---~~~~~a~~l~~ 461 (489)
++.-+ .+.++++|.++++ ++ +|.++|.+.++
T Consensus 448 ~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~ 482 (500)
T TIGR02918 448 DDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAE 482 (500)
T ss_pred cchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHH
Confidence 00112 7889999999996 43 44455544433
No 116
>PHA01633 putative glycosyl transferase group 1
Probab=96.18 E-value=0.16 Score=49.73 Aligned_cols=97 Identities=16% Similarity=0.225 Sum_probs=60.5
Q ss_pred CCCccc---cccCHH---HHhccCCcceEEec---CC-chhHHHHHHhCCcEEeccC------cchh------hHHHHHH
Q 011311 354 GRGMIC---GWAPQK---EVLAHSAIGGFVSH---CG-WNSILESVWFGVPIVTWPI------YAEQ------QINAFQM 411 (489)
Q Consensus 354 ~~~~v~---~w~pq~---~iL~~~~~~~~i~H---gG-~~s~~eal~~GvP~v~~P~------~~DQ------~~na~~v 411 (489)
+++.+. +++++. ++++.+++ ||.- =| -.+++||+++|+|+|+--. .+|+ ..++...
T Consensus 201 ~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~ 278 (335)
T PHA01633 201 ANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEY 278 (335)
T ss_pred CcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHh
Confidence 556665 455654 57888998 7753 24 3478999999999998633 2333 3333333
Q ss_pred H--HhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcC-CH-HHHHHHHHHHHH
Q 011311 412 V--RDLGLAVELRLDYRRGTENHVMADELARAVGCVMDG-DS-EVRKRVKEVSEK 462 (489)
Q Consensus 412 ~--~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~-~~-~~~~~a~~l~~~ 462 (489)
+ +. |.|..++ ..++++++++|.+++.. ++ ....++++.+++
T Consensus 279 ~~~~~-g~g~~~~---------~~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~ 323 (335)
T PHA01633 279 YDKEH-GQKWKIH---------KFQIEDMANAIILAFELQDREERSMKLKELAKK 323 (335)
T ss_pred cCccc-Cceeeec---------CCCHHHHHHHHHHHHhccChhhhhHHHHHHHHh
Confidence 3 23 6666554 57999999999999642 22 333444444444
No 117
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.88 E-value=0.34 Score=49.29 Aligned_cols=100 Identities=19% Similarity=0.310 Sum_probs=70.0
Q ss_pred HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEE-eeeccccCCCCccCHHHHHHHHHH
Q 011311 366 EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVE-LRLDYRRGTENHVMADELARAVGC 444 (489)
Q Consensus 366 ~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~-l~~~~~~~~~~~~~~~~l~~ai~~ 444 (489)
.++++|++ +|.. =.-++.-|+..|||.+++++ |+.... .+ +.+|..-. ++.+ .++.++|.+.+.+
T Consensus 323 ~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~~K~~~-~~-~~lg~~~~~~~~~-------~l~~~~Li~~v~~ 388 (426)
T PRK10017 323 KILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--EHKSAG-IM-QQLGLPEMAIDIR-------HLLDGSLQAMVAD 388 (426)
T ss_pred HHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--hHHHHH-HH-HHcCCccEEechh-------hCCHHHHHHHHHH
Confidence 68999997 7743 34467788999999999999 444433 33 55688755 4444 7899999999999
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 445 VMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 445 vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
++++.+++++..++..+++++. +.+.+.++++.+-
T Consensus 389 ~~~~r~~~~~~l~~~v~~~r~~------~~~~~~~~~~~~~ 423 (426)
T PRK10017 389 TLGQLPALNARLAEAVSRERQT------GMQMVQSVLERIG 423 (426)
T ss_pred HHhCHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHhc
Confidence 9985457777666655555542 3456667766654
No 118
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=95.88 E-value=0.12 Score=52.89 Aligned_cols=137 Identities=20% Similarity=0.234 Sum_probs=87.5
Q ss_pred CCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHh--hhcCCCccccc
Q 011311 284 PASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQE--RSKGRGMICGW 361 (489)
Q Consensus 284 ~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~v~~w 361 (489)
|++-+||+||+-..-..++.+..=+.-|+..+--++|..+++.. ++....+-+-+.+ -..++.++.+-
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~----------~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDD----------AEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCc----------HHHHHHHHHHHHHcCCChhheeecCC
Confidence 45679999999999889999888888888999999999877420 1111111111100 01234445455
Q ss_pred cC---HHHHhccCCcceEEe---cCCchhHHHHHHhCCcEEeccCcchhh--HHHHHHHHhhCeEEEeeeccccCCCCcc
Q 011311 362 AP---QKEVLAHSAIGGFVS---HCGWNSILESVWFGVPIVTWPIYAEQQ--INAFQMVRDLGLAVELRLDYRRGTENHV 433 (489)
Q Consensus 362 ~p---q~~iL~~~~~~~~i~---HgG~~s~~eal~~GvP~v~~P~~~DQ~--~na~~v~~~~G~G~~l~~~~~~~~~~~~ 433 (489)
.| |.+=+.-+++ |+- -||+.|+.|+|+.|||+|.++ ++|+ .|+.-++...|+--.+- +-
T Consensus 497 ~~~~~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA---------~s 563 (620)
T COG3914 497 APNEDHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA---------DS 563 (620)
T ss_pred CCCHHHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc---------CC
Confidence 55 3445556666 664 699999999999999998876 5665 34555555545544443 22
Q ss_pred CHHHHHHHHH
Q 011311 434 MADELARAVG 443 (489)
Q Consensus 434 ~~~~l~~ai~ 443 (489)
.++=++++|+
T Consensus 564 ~~dYV~~av~ 573 (620)
T COG3914 564 RADYVEKAVA 573 (620)
T ss_pred HHHHHHHHHH
Confidence 4455777773
No 119
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.82 E-value=0.29 Score=49.02 Aligned_cols=76 Identities=21% Similarity=0.126 Sum_probs=51.1
Q ss_pred CCCccccccCHHH---HhccCCcceEE------ecCCc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeee
Q 011311 354 GRGMICGWAPQKE---VLAHSAIGGFV------SHCGW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRL 423 (489)
Q Consensus 354 ~~~~v~~w~pq~~---iL~~~~~~~~i------~HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 423 (489)
+|+.+.+++|+.+ .|.++++..+- +.++. +.+.|++++|+|+|+.++ +. . .+..+ |..+.
T Consensus 254 ~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~----~~---~-~~~~~-~~~~~- 323 (373)
T cd04950 254 PNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL----PE---V-RRYED-EVVLI- 323 (373)
T ss_pred CCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc----HH---H-HhhcC-cEEEe-
Confidence 6788889998665 68889983322 12232 458999999999998763 11 2 23313 33332
Q ss_pred ccccCCCCccCHHHHHHHHHHHhc
Q 011311 424 DYRRGTENHVMADELARAVGCVMD 447 (489)
Q Consensus 424 ~~~~~~~~~~~~~~l~~ai~~vl~ 447 (489)
.-+.+++.++|.+++.
T Consensus 324 --------~~d~~~~~~ai~~~l~ 339 (373)
T cd04950 324 --------ADDPEEFVAAIEKALL 339 (373)
T ss_pred --------CCCHHHHHHHHHHHHh
Confidence 2279999999999875
No 120
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=95.65 E-value=0.11 Score=53.28 Aligned_cols=127 Identities=23% Similarity=0.314 Sum_probs=80.5
Q ss_pred CCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccC
Q 011311 284 PASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAP 363 (489)
Q Consensus 284 ~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~p 363 (489)
+++.+||++|--..-.+++.+..-++-|...+..++|..+.+-. ++ ..+.... ..+ .-.++++.+.+-+.
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~-------ge-~rf~ty~-~~~-Gl~p~riifs~va~ 825 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV-------GE-QRFRTYA-EQL-GLEPDRIIFSPVAA 825 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEecccc-------ch-HHHHHHH-HHh-CCCccceeeccccc
Confidence 34569999999888899999999999999999999999986521 00 0000000 000 01234544444443
Q ss_pred HHHHhcc-----CCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEe
Q 011311 364 QKEVLAH-----SAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVEL 421 (489)
Q Consensus 364 q~~iL~~-----~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l 421 (489)
..+-.++ -.+.-+.+ -|..|.++.+++|||||.+|.-.---..|..+...+|+|-.+
T Consensus 826 k~eHvrr~~LaDv~LDTplc-nGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli 887 (966)
T KOG4626|consen 826 KEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI 887 (966)
T ss_pred hHHHHHhhhhhhhcccCcCc-CCcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH
Confidence 3332222 11222443 478899999999999999998766555555555666888744
No 121
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.00 E-value=5.5 Score=41.76 Aligned_cols=63 Identities=21% Similarity=0.228 Sum_probs=44.0
Q ss_pred CCCccccccCHH-HHhccCCcceEEec---CC-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeee
Q 011311 354 GRGMICGWAPQK-EVLAHSAIGGFVSH---CG-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRL 423 (489)
Q Consensus 354 ~~~~v~~w~pq~-~iL~~~~~~~~i~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 423 (489)
+++.+.+|..+. .+|..+++ ||.. -| -+++.||+++|+|+|+....+ +...+.+. ..|..++.
T Consensus 455 d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvGG----~~EiV~dG-~nG~LVp~ 522 (578)
T PRK15490 455 ERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAGG----SAECFIEG-VSGFILDD 522 (578)
T ss_pred CcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCCC----cHHHcccC-CcEEEECC
Confidence 667777776543 48999998 8753 34 569999999999999877643 33344344 56777653
No 122
>PRK14098 glycogen synthase; Provisional
Probab=94.96 E-value=0.41 Score=49.84 Aligned_cols=133 Identities=12% Similarity=0.097 Sum_probs=74.6
Q ss_pred ceEEEeecCCcC-CCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHH
Q 011311 287 SVVFLCFGSMGS-FGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQK 365 (489)
Q Consensus 287 ~vV~vs~GS~~~-~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~ 365 (489)
.++++..|.+.. ...+.+.+.+..+.+.+.++++. |... ..+ ...+ ..+..+.++++.+..+++..
T Consensus 307 ~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lviv-G~G~--------~~~---~~~l-~~l~~~~~~~V~~~g~~~~~ 373 (489)
T PRK14098 307 TPLVGVIINFDDFQGAELLAESLEKLVELDIQLVIC-GSGD--------KEY---EKRF-QDFAEEHPEQVSVQTEFTDA 373 (489)
T ss_pred CCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEE-eCCC--------HHH---HHHH-HHHHHHCCCCEEEEEecCHH
Confidence 355566677552 23344444444444446665554 4321 000 0111 11222334667777777764
Q ss_pred ---HHhccCCcceEEecC---Cc-hhHHHHHHhCCcEEeccCcc--hhhHHHHHHHHhhCeEEEeeeccccCCCCccCHH
Q 011311 366 ---EVLAHSAIGGFVSHC---GW-NSILESVWFGVPIVTWPIYA--EQQINAFQMVRDLGLAVELRLDYRRGTENHVMAD 436 (489)
Q Consensus 366 ---~iL~~~~~~~~i~Hg---G~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~ 436 (489)
.+++.+++ ||.-. |. .+.+||+++|+|.|+....+ |...+ ...+. +.|..++ .-+++
T Consensus 374 ~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~~---------~~d~~ 439 (489)
T PRK14098 374 FFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIFH---------DYTPE 439 (489)
T ss_pred HHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEeC---------CCCHH
Confidence 58899998 76532 22 37889999999888876543 21111 00123 6677665 34789
Q ss_pred HHHHHHHHHh
Q 011311 437 ELARAVGCVM 446 (489)
Q Consensus 437 ~l~~ai~~vl 446 (489)
+++++|.+++
T Consensus 440 ~la~ai~~~l 449 (489)
T PRK14098 440 ALVAKLGEAL 449 (489)
T ss_pred HHHHHHHHHH
Confidence 9999998876
No 123
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=94.67 E-value=0.84 Score=47.39 Aligned_cols=136 Identities=13% Similarity=0.120 Sum_probs=73.3
Q ss_pred ceEEEeecCCc-CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHH
Q 011311 287 SVVFLCFGSMG-SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQK 365 (489)
Q Consensus 287 ~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~ 365 (489)
..+++..|.+. ....+.+.+.+..+.+.+.++++. |... + .+ ...+ ..+..+.+.++.+....++.
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~-------~-~~---~~~l-~~~~~~~~~~v~~~~~~~~~ 357 (473)
T TIGR02095 291 VPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGD-------P-EL---EEAL-RELAERYPGNVRVIIGYDEA 357 (473)
T ss_pred CCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCC-------H-HH---HHHH-HHHHHHCCCcEEEEEcCCHH
Confidence 45666677765 233344444444444456666654 3320 0 00 0001 11112223455554444543
Q ss_pred ---HHhccCCcceEEec---CCch-hHHHHHHhCCcEEeccCcc--hhhHHHHHHHHhhCeEEEeeeccccCCCCccCHH
Q 011311 366 ---EVLAHSAIGGFVSH---CGWN-SILESVWFGVPIVTWPIYA--EQQINAFQMVRDLGLAVELRLDYRRGTENHVMAD 436 (489)
Q Consensus 366 ---~iL~~~~~~~~i~H---gG~~-s~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~ 436 (489)
.+++.+++ +|.- -|.| +.+||+++|+|.|+-...+ |.-.+..--... +.|+.+. .-+++
T Consensus 358 ~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~-~~G~l~~---------~~d~~ 425 (473)
T TIGR02095 358 LAHLIYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAES-GTGFLFE---------EYDPG 425 (473)
T ss_pred HHHHHHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCC-CceEEeC---------CCCHH
Confidence 48889998 6642 2443 7899999999999876542 211111000111 5677665 34789
Q ss_pred HHHHHHHHHhc
Q 011311 437 ELARAVGCVMD 447 (489)
Q Consensus 437 ~l~~ai~~vl~ 447 (489)
+++++|.+++.
T Consensus 426 ~la~~i~~~l~ 436 (473)
T TIGR02095 426 ALLAALSRALR 436 (473)
T ss_pred HHHHHHHHHHH
Confidence 99999999885
No 124
>PHA01630 putative group 1 glycosyl transferase
Probab=94.17 E-value=1.1 Score=44.23 Aligned_cols=110 Identities=12% Similarity=0.034 Sum_probs=59.9
Q ss_pred ccCHHH---HhccCCcceEEec-CC-chhHHHHHHhCCcEEeccCcc--hhhHHHH--HHHHh-----------hCeEEE
Q 011311 361 WAPQKE---VLAHSAIGGFVSH-CG-WNSILESVWFGVPIVTWPIYA--EQQINAF--QMVRD-----------LGLAVE 420 (489)
Q Consensus 361 w~pq~~---iL~~~~~~~~i~H-gG-~~s~~eal~~GvP~v~~P~~~--DQ~~na~--~v~~~-----------~G~G~~ 420 (489)
++|+.+ +++.+++-++-++ .| -.++.||+++|+|+|+.-..+ |.-.+.. .+++. .++|..
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~ 276 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYF 276 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccc
Confidence 366544 6889998222233 22 458999999999999976543 3211110 00110 023433
Q ss_pred eeeccccCCCCccCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011311 421 LRLDYRRGTENHVMADELARAVGCVMDGD--SEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDL 484 (489)
Q Consensus 421 l~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 484 (489)
+ ..+.+++.+++.+++.+. +.++++...-+...++ .-+-....+++.+-+
T Consensus 277 v----------~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~----~fs~~~ia~k~~~l~ 328 (331)
T PHA01630 277 L----------DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRE----NYSYNAIAKMWEKIL 328 (331)
T ss_pred c----------CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHH
Confidence 2 236678888888888732 4555554444444333 344445555555444
No 125
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=94.07 E-value=0.64 Score=48.22 Aligned_cols=136 Identities=18% Similarity=0.226 Sum_probs=71.9
Q ss_pred ceEEEeecCCc-CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-cccCH
Q 011311 287 SVVFLCFGSMG-SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-GWAPQ 364 (489)
Q Consensus 287 ~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~w~pq 364 (489)
..+++..|.+. ....+.+.+.+..+.+.+.++++.-.+.. .+ ...+ .....+..+++.+. .+...
T Consensus 296 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~---------~~---~~~~-~~~~~~~~~~v~~~~~~~~~ 362 (476)
T cd03791 296 APLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDP---------EY---EEAL-RELAARYPGRVAVLIGYDEA 362 (476)
T ss_pred CCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCH---------HH---HHHH-HHHHHhCCCcEEEEEeCCHH
Confidence 45666677765 22334444444444445566655432210 00 0001 01111223555544 44322
Q ss_pred H--HHhccCCcceEEec---CCc-hhHHHHHHhCCcEEeccCcc--hhhHHHHHHHHhhCeEEEeeeccccCCCCccCHH
Q 011311 365 K--EVLAHSAIGGFVSH---CGW-NSILESVWFGVPIVTWPIYA--EQQINAFQMVRDLGLAVELRLDYRRGTENHVMAD 436 (489)
Q Consensus 365 ~--~iL~~~~~~~~i~H---gG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~ 436 (489)
. .++..+++ +|.- -|. .+.+||+++|+|+|+....+ |.-.+...-.+. |.|+.++ .-+.+
T Consensus 363 ~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~---------~~~~~ 430 (476)
T cd03791 363 LAHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFE---------GYNAD 430 (476)
T ss_pred HHHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeC---------CCCHH
Confidence 2 47888898 6642 122 47899999999999876542 211111000022 4787775 34789
Q ss_pred HHHHHHHHHhc
Q 011311 437 ELARAVGCVMD 447 (489)
Q Consensus 437 ~l~~ai~~vl~ 447 (489)
+++++|.++++
T Consensus 431 ~l~~~i~~~l~ 441 (476)
T cd03791 431 ALLAALRRALA 441 (476)
T ss_pred HHHHHHHHHHH
Confidence 99999999885
No 126
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=93.65 E-value=0.99 Score=34.83 Aligned_cols=82 Identities=17% Similarity=0.227 Sum_probs=50.6
Q ss_pred cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCe-EEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHH
Q 011311 379 HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGL-AVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVK 457 (489)
Q Consensus 379 HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~-G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~ 457 (489)
+|-..-+.|++++|+|+|+-.. ...... ... |. ++.. . +.+++.++|..+++ ++..+++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~-~~~-~~~~~~~----------~-~~~el~~~i~~ll~-~~~~~~~-- 68 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREI-FED-GEHIITY----------N-DPEELAEKIEYLLE-NPEERRR-- 68 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHH-cCC-CCeEEEE----------C-CHHHHHHHHHHHHC-CHHHHHH--
Confidence 4555689999999999999866 222222 222 42 2222 3 89999999999999 6644333
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHH
Q 011311 458 EVSEKARLALRDGGSSYAATGRLI 481 (489)
Q Consensus 458 ~l~~~~~~~~~~~g~~~~~~~~~~ 481 (489)
+++..++.+...-+...-+++|+
T Consensus 69 -ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 69 -IAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred -HHHHHHHHHHHhCCHHHHHHHHH
Confidence 33333333333556556666654
No 127
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=93.00 E-value=0.13 Score=40.43 Aligned_cols=53 Identities=15% Similarity=0.264 Sum_probs=43.6
Q ss_pred hhHHHHhhhcCCCCceEEEeecCCcCC---CH--HHHHHHHHHHhhcCCeEEEEecCC
Q 011311 273 RDEIIRWLDDQPASSVVFLCFGSMGSF---GE--EQIQEIASGLEKSGVRFLWSLRKT 325 (489)
Q Consensus 273 ~~~l~~~l~~~~~~~vV~vs~GS~~~~---~~--~~~~~~~~al~~~~~~~vw~~~~~ 325 (489)
...+..|+...+.++.|.||+||.... .. ..+..+++++...+..+|..+...
T Consensus 27 ~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 27 PAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp SEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 345677998888899999999997633 22 368889999999999999999865
No 128
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.29 E-value=1 Score=42.50 Aligned_cols=107 Identities=19% Similarity=0.188 Sum_probs=65.4
Q ss_pred cccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhh--HHHHHHHHhhCeEEEeeeccccCCCCccCHHH
Q 011311 360 GWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQ--INAFQMVRDLGLAVELRLDYRRGTENHVMADE 437 (489)
Q Consensus 360 ~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~--~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~ 437 (489)
.|-...++|.++++ .|--.|- .+-.++--|+|+|.+|-.+-|+ ..|+|=.+-+|..+.+-. ..+..
T Consensus 301 sqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~---------~~aq~ 368 (412)
T COG4370 301 SQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR---------PEAQA 368 (412)
T ss_pred eHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC---------Cchhh
Confidence 44444556666665 4433332 2344677899999999999994 566665566788877642 23344
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 438 LARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 438 l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
-..+..+++. |+.+..+++.-+. +.++..|...+..+++-+
T Consensus 369 a~~~~q~ll~-dp~r~~air~nGq---rRiGqaGaa~rIAe~l~e 409 (412)
T COG4370 369 AAQAVQELLG-DPQRLTAIRHNGQ---RRIGQAGAARRIAEELGE 409 (412)
T ss_pred HHHHHHHHhc-ChHHHHHHHhcch---hhccCcchHHHHHHHHHH
Confidence 4445555888 7766666553332 335556776666666543
No 129
>PRK10125 putative glycosyl transferase; Provisional
Probab=91.21 E-value=3.6 Score=41.77 Aligned_cols=61 Identities=15% Similarity=0.073 Sum_probs=42.3
Q ss_pred HHHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHH
Q 011311 365 KEVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELAR 440 (489)
Q Consensus 365 ~~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ 440 (489)
..+++.+++ ||.- |--++++||+++|+|+|+....+ -+. +++. +-|+.++.. +.++|++
T Consensus 301 ~~~y~~aDv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG-~~E----iv~~-~~G~lv~~~---------d~~~La~ 363 (405)
T PRK10125 301 MSALNQMDA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA-ARE----VLQK-SGGKTVSEE---------EVLQLAQ 363 (405)
T ss_pred HHHHHhCCE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC-hHH----hEeC-CcEEEECCC---------CHHHHHh
Confidence 346777887 7753 33468999999999999998875 222 3455 578877643 6777876
Q ss_pred HH
Q 011311 441 AV 442 (489)
Q Consensus 441 ai 442 (489)
++
T Consensus 364 ~~ 365 (405)
T PRK10125 364 LS 365 (405)
T ss_pred cc
Confidence 53
No 130
>PLN02501 digalactosyldiacylglycerol synthase
Probab=90.22 E-value=3.4 Score=44.26 Aligned_cols=74 Identities=9% Similarity=0.002 Sum_probs=50.6
Q ss_pred CccccccCHH-HHhccCCcceEEecC----CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 356 GMICGWAPQK-EVLAHSAIGGFVSHC----GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 356 ~~v~~w~pq~-~iL~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
+.+.++.++. ++|+.+++ ||.-+ =-++++||+++|+|+|+.-..+... + .. |.+..+.
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~-g~nGll~-------- 665 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RS-FPNCLTY-------- 665 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-ee-cCCeEec--------
Confidence 4445666655 59999998 77532 2468999999999999987765321 1 22 3222221
Q ss_pred CccCHHHHHHHHHHHhcC
Q 011311 431 NHVMADELARAVGCVMDG 448 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~ 448 (489)
-+.++++++|.+++++
T Consensus 666 --~D~EafAeAI~~LLsd 681 (794)
T PLN02501 666 --KTSEDFVAKVKEALAN 681 (794)
T ss_pred --CCHHHHHHHHHHHHhC
Confidence 2689999999999983
No 131
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=90.18 E-value=2.8 Score=43.17 Aligned_cols=102 Identities=17% Similarity=0.121 Sum_probs=68.6
Q ss_pred cccCHHH---HhccCCcceEEe---cCCch-hHHHHHHhCCc----EEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 360 GWAPQKE---VLAHSAIGGFVS---HCGWN-SILESVWFGVP----IVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 360 ~w~pq~~---iL~~~~~~~~i~---HgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
..+++.+ +++.+++ ||. +=|+| ++.||+++|+| +|+--+.+-.. .+ +-|+.++
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~----~l----~~gllVn------ 405 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQ----EL----NGALLVN------ 405 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCChH----Hh----CCcEEEC------
Confidence 3456654 6888888 665 33655 78899999999 66655554321 11 3466555
Q ss_pred CCCccCHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 429 TENHVMADELARAVGCVMDGD-SEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
..+.++++++|.++++.+ ++.+++.+++.+.+.. -+...-.++|+++|.
T Consensus 406 ---P~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 406 ---PYDIDGMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred ---CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 448899999999999733 3556666666665443 467777888888874
No 132
>PLN02846 digalactosyldiacylglycerol synthase
Probab=90.03 E-value=5.7 Score=40.86 Aligned_cols=72 Identities=10% Similarity=-0.017 Sum_probs=50.9
Q ss_pred cccccCHHHHhccCCcceEEecC----CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCcc
Q 011311 358 ICGWAPQKEVLAHSAIGGFVSHC----GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHV 433 (489)
Q Consensus 358 v~~w~pq~~iL~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~ 433 (489)
+.++.+..+++...++ ||.-+ =-++++||+++|+|+|+.-..+. ..+.+. +.|... -
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~~-----~~v~~~-~ng~~~-----------~ 348 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPSN-----EFFKQF-PNCRTY-----------D 348 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCCc-----ceeecC-CceEec-----------C
Confidence 3466666779999998 88763 35689999999999999865532 222232 444332 2
Q ss_pred CHHHHHHHHHHHhcC
Q 011311 434 MADELARAVGCVMDG 448 (489)
Q Consensus 434 ~~~~l~~ai~~vl~~ 448 (489)
+.+++.+++.++|.+
T Consensus 349 ~~~~~a~ai~~~l~~ 363 (462)
T PLN02846 349 DGKGFVRATLKALAE 363 (462)
T ss_pred CHHHHHHHHHHHHcc
Confidence 578999999999973
No 133
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=89.89 E-value=6.3 Score=38.34 Aligned_cols=39 Identities=21% Similarity=0.218 Sum_probs=33.3
Q ss_pred CHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcc
Q 011311 363 PQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYA 402 (489)
Q Consensus 363 pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 402 (489)
|+...|+.++. .|||==-.+-+.||+..|+|+.++|.-.
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC
Confidence 68889999987 4666666778899999999999999986
No 134
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=88.85 E-value=1.5 Score=45.23 Aligned_cols=102 Identities=20% Similarity=0.162 Sum_probs=62.5
Q ss_pred ccccCHHH---HhccCCcceEEe---cCCch-hHHHHHHhCCc----EEeccCcchhhHHHHHHHHhhCeEEEeeecccc
Q 011311 359 CGWAPQKE---VLAHSAIGGFVS---HCGWN-SILESVWFGVP----IVTWPIYAEQQINAFQMVRDLGLAVELRLDYRR 427 (489)
Q Consensus 359 ~~w~pq~~---iL~~~~~~~~i~---HgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 427 (489)
.+++++.+ +++.+++ ||. +-|+| ++.||+++|+| +|+--..+ -... ..-|+.++
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G-~~~~-------~~~g~lv~----- 410 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG-AAEE-------LSGALLVN----- 410 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc-chhh-------cCCCEEEC-----
Confidence 36777665 6888888 663 34544 67899999999 44432222 1110 13355554
Q ss_pred CCCCccCHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011311 428 GTENHVMADELARAVGCVMDGDS-EVRKRVKEVSEKARLALRDGGSSYAATGRLIEDL 484 (489)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl~~~~-~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 484 (489)
.-+.++++++|.+++++++ +.+++.++..+.+. .-+...-+++|+++|
T Consensus 411 ----p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 411 ----PYDIDEVADAIHRALTMPLEERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred ----CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 3478999999999998433 33333333333332 346677778888776
No 135
>PLN02316 synthase/transferase
Probab=88.58 E-value=16 Score=41.42 Aligned_cols=103 Identities=9% Similarity=-0.005 Sum_probs=59.6
Q ss_pred CCCccccccCHH---HHhccCCcceEEecC---C-chhHHHHHHhCCcEEeccCcc--hhhHHH----H--HHHHhhCeE
Q 011311 354 GRGMICGWAPQK---EVLAHSAIGGFVSHC---G-WNSILESVWFGVPIVTWPIYA--EQQINA----F--QMVRDLGLA 418 (489)
Q Consensus 354 ~~~~v~~w~pq~---~iL~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~--DQ~~na----~--~v~~~~G~G 418 (489)
+++.+....+.. .+++.+++ ||.-. | -.+.+||+++|+|.|+-...+ |.-... . .....-+-|
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 455554344443 58999998 77432 2 348999999999988765532 221111 0 000001457
Q ss_pred EEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcC
Q 011311 419 VELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDG 470 (489)
Q Consensus 419 ~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~ 470 (489)
..++ .-+++.|..+|.+++. . |......+++..++.+...
T Consensus 978 flf~---------~~d~~aLa~AL~raL~-~--~~~~~~~~~~~~r~~m~~d 1017 (1036)
T PLN02316 978 FSFD---------GADAAGVDYALNRAIS-A--WYDGRDWFNSLCKRVMEQD 1017 (1036)
T ss_pred EEeC---------CCCHHHHHHHHHHHHh-h--hhhhHHHHHHHHHHHHHhh
Confidence 6665 4588999999999997 2 3333344455555544333
No 136
>PLN02939 transferase, transferring glycosyl groups
Probab=88.47 E-value=13 Score=41.48 Aligned_cols=83 Identities=8% Similarity=0.020 Sum_probs=53.0
Q ss_pred CCCccccccCHH---HHhccCCcceEEecC---C-chhHHHHHHhCCcEEeccCcc--hhhHH--HHHHHHhhCeEEEee
Q 011311 354 GRGMICGWAPQK---EVLAHSAIGGFVSHC---G-WNSILESVWFGVPIVTWPIYA--EQQIN--AFQMVRDLGLAVELR 422 (489)
Q Consensus 354 ~~~~v~~w~pq~---~iL~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~--DQ~~n--a~~v~~~~G~G~~l~ 422 (489)
+++.+..+.+.. .+++.+++ ||.-. | -.+.+||+++|+|.|+....+ |--.+ ...+.+.-+-|..+.
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~ 914 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFL 914 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEec
Confidence 466777777764 48999998 77531 2 347999999999999876643 21111 100111114566654
Q ss_pred eccccCCCCccCHHHHHHHHHHHhc
Q 011311 423 LDYRRGTENHVMADELARAVGCVMD 447 (489)
Q Consensus 423 ~~~~~~~~~~~~~~~l~~ai~~vl~ 447 (489)
.-+++.|.++|.+++.
T Consensus 915 ---------~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 915 ---------TPDEQGLNSALERAFN 930 (977)
T ss_pred ---------CCCHHHHHHHHHHHHH
Confidence 3478889998888764
No 137
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=87.60 E-value=1.6 Score=36.92 Aligned_cols=96 Identities=16% Similarity=0.131 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCChHH
Q 011311 20 SVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKMNPPPLDYFKSPEK 99 (489)
Q Consensus 20 P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~ 99 (489)
-+..|+++| .++| |+|+++++... ....... ..++++..++...... ...
T Consensus 6 ~~~~l~~~L--~~~G--------~~V~v~~~~~~--------~~~~~~~------~~~~~~~~~~~~~~~~------~~~ 55 (160)
T PF13579_consen 6 YVRELARAL--AARG--------HEVTVVTPQPD--------PEDDEEE------EDGVRVHRLPLPRRPW------PLR 55 (160)
T ss_dssp HHHHHHHHH--HHTT---------EEEEEEE-----------GGG-SEE------ETTEEEEEE--S-SSS------GGG
T ss_pred HHHHHHHHH--HHCC--------CEEEEEecCCC--------Ccccccc------cCCceEEeccCCccch------hhh
Confidence 467899999 9999 77999987633 0111111 3468887776432111 000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCc-hHHHHHH-HhCCCeEEEe
Q 011311 100 FITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCS-SMIDTAN-ELGVPSYVFF 154 (489)
Q Consensus 100 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~-~~~~vA~-~lgiP~v~~~ 154 (489)
.... . ..+ .+++.....++|+|.+..... ....++. ..++|++...
T Consensus 56 ~~~~-~----~~~----~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 103 (160)
T PF13579_consen 56 LLRF-L----RRL----RRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTV 103 (160)
T ss_dssp HCCH-H----HHH----HHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-
T ss_pred hHHH-H----HHH----HHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEE
Confidence 0010 1 112 222211246899998765332 3344555 7899987654
No 138
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=86.80 E-value=3.3 Score=37.26 Aligned_cols=49 Identities=20% Similarity=0.259 Sum_probs=36.1
Q ss_pred CCCccccccCH-H--H-HhccCCcceEEecCC----chhHHHHHHhCCcEEeccCcchh
Q 011311 354 GRGMICGWAPQ-K--E-VLAHSAIGGFVSHCG----WNSILESVWFGVPIVTWPIYAEQ 404 (489)
Q Consensus 354 ~~~~v~~w~pq-~--~-iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ 404 (489)
+|+.+.+++++ . . ++..+++ +|+-.. .+++.||+++|+|+|+-+..+.+
T Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 161 DRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred ccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCcc
Confidence 56777777632 2 2 4444888 777776 78999999999999998876544
No 139
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=82.11 E-value=5.1 Score=42.00 Aligned_cols=75 Identities=11% Similarity=0.156 Sum_probs=52.1
Q ss_pred CCCccccccC--HH-HHhccCCcceEEecC---CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecccc
Q 011311 354 GRGMICGWAP--QK-EVLAHSAIGGFVSHC---GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRR 427 (489)
Q Consensus 354 ~~~~v~~w~p--q~-~iL~~~~~~~~i~Hg---G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 427 (489)
.++.+.++.. +. .+|.+..+ +|.=+ |.++.+||+++|||+| .+.....|.+. .-|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~-~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHN-KNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcC-CCcEEeC-----
Confidence 4566668777 33 47888877 88755 7779999999999999 22222233332 4454442
Q ss_pred CCCCccCHHHHHHHHHHHhcCCH
Q 011311 428 GTENHVMADELARAVGCVMDGDS 450 (489)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl~~~~ 450 (489)
+.++|.++|...|. +.
T Consensus 474 ------d~~~l~~al~~~L~-~~ 489 (519)
T TIGR03713 474 ------DISELLKALDYYLD-NL 489 (519)
T ss_pred ------CHHHHHHHHHHHHh-CH
Confidence 67899999999998 54
No 140
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=81.39 E-value=1.2 Score=44.51 Aligned_cols=116 Identities=16% Similarity=0.231 Sum_probs=69.0
Q ss_pred CCCccc-cccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCc
Q 011311 354 GRGMIC-GWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENH 432 (489)
Q Consensus 354 ~~~~v~-~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 432 (489)
+++..+ +..+-.++|..+++ .||-.. ..+.|.+..+.|+|....-.|++... + |.-...... .-+. ..
T Consensus 252 ~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPiify~~D~~~Y~~~-----r-g~~~~~~~~-~pg~-~~ 320 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPIIFYQPDLEEYEKE-----R-GFYFDYEED-LPGP-IV 320 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTT-----S-SBSS-TTTS-SSS--EE
T ss_pred CcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEEEEeccHHHHhhc-----c-CCCCchHhh-CCCc-ee
Confidence 454444 45567899999999 999984 47889999999999887766666322 2 333221100 0000 03
Q ss_pred cCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 011311 433 VMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLI 481 (489)
Q Consensus 433 ~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 481 (489)
-+.++|.++|+.+++++..++++-++..+++-. ..+|.++.+.++.++
T Consensus 321 ~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 321 YNFEELIEAIENIIENPDEYKEKREKFRDKFFK-YNDGNSSERIVNYIF 368 (369)
T ss_dssp SSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHST-T--S-HHHHHHHHHH
T ss_pred CCHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCC-CCCchHHHHHHHHHh
Confidence 468999999999887334566666667666655 367888887777765
No 141
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=81.12 E-value=6.2 Score=43.76 Aligned_cols=98 Identities=16% Similarity=0.149 Sum_probs=63.4
Q ss_pred HHhccCCcceEEe---cCCch-hHHHHHHhCCc---EEeccCcchhhHHHHHHHHhhC-eEEEeeeccccCCCCccCHHH
Q 011311 366 EVLAHSAIGGFVS---HCGWN-SILESVWFGVP---IVTWPIYAEQQINAFQMVRDLG-LAVELRLDYRRGTENHVMADE 437 (489)
Q Consensus 366 ~iL~~~~~~~~i~---HgG~~-s~~eal~~GvP---~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~~~~~ 437 (489)
.+++.+++ ||. .-|+| +..|++++|.| +++++-+.- .+.. +| -|+.++ ..+.++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G---~~~~----l~~~allVn---------P~D~~~ 432 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG---AGQS----LGAGALLVN---------PWNITE 432 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcC---chhh----hcCCeEEEC---------CCCHHH
Confidence 57888888 664 44877 67799999999 444443321 1111 24 466665 458999
Q ss_pred HHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 438 LARAVGCVMDG-DSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 438 l~~ai~~vl~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
++++|.++|+- .++.+++.+++.+.++.. +...-.++|++++.+
T Consensus 433 lA~AI~~aL~m~~~er~~r~~~~~~~v~~~-----~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 433 VSSAIKEALNMSDEERETRHRHNFQYVKTH-----SAQKWADDFMSELND 477 (797)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhhhC-----CHHHHHHHHHHHHHH
Confidence 99999999983 345555555555554433 455667777776653
No 142
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=80.15 E-value=32 Score=30.11 Aligned_cols=41 Identities=7% Similarity=-0.020 Sum_probs=31.5
Q ss_pred HHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHh-CCCeEEEec
Q 011311 114 EAIIEHVLNNNVKIAGLVLDFFCSSMIDTANEL-GVPSYVFFT 155 (489)
Q Consensus 114 ~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~l-giP~v~~~~ 155 (489)
..+.++.+. ...||+||.+.-...++-+-+.+ ++|.+.++-
T Consensus 55 ~a~~~L~~~-Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 55 RAARQLRAQ-GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred HHHHHHHHc-CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 344555543 67899999998887788888999 999888753
No 143
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=79.60 E-value=33 Score=28.24 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=58.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKM 86 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~ 86 (489)
|++++.....| ...+++.| .++| ++|++++.... + +.. ....++.++.++..
T Consensus 2 Il~i~~~~~~~---~~~~~~~L--~~~g--------~~V~ii~~~~~---------~-~~~-----~~~~~i~~~~~~~~ 53 (139)
T PF13477_consen 2 ILLIGNTPSTF---IYNLAKEL--KKRG--------YDVHIITPRND---------Y-EKY-----EIIEGIKVIRLPSP 53 (139)
T ss_pred EEEEecCcHHH---HHHHHHHH--HHCC--------CEEEEEEcCCC---------c-hhh-----hHhCCeEEEEecCC
Confidence 77777766666 45789999 9999 77999987532 1 111 11457888777532
Q ss_pred CCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCc-h--HHHHHHHhC-CCeEEE
Q 011311 87 NPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCS-S--MIDTANELG-VPSYVF 153 (489)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~-~--~~~vA~~lg-iP~v~~ 153 (489)
.......+ .. + .+..+++ ..+||+|.+..... + +..++...+ +|.+..
T Consensus 54 -------~k~~~~~~----~~----~--~l~k~ik--~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 54 -------RKSPLNYI----KY----F--RLRKIIK--KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred -------CCccHHHH----HH----H--HHHHHhc--cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 11111211 11 1 2344444 35899998766543 2 234556778 887754
No 144
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=79.45 E-value=14 Score=39.00 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=49.2
Q ss_pred CHHHHhccCCcceEEe-cCCch-hHHHHHHhCCcEEeccCcc-hhhHHHHHHHHhh-CeEEEeeeccccCCCCccCHHHH
Q 011311 363 PQKEVLAHSAIGGFVS-HCGWN-SILESVWFGVPIVTWPIYA-EQQINAFQMVRDL-GLAVELRLDYRRGTENHVMADEL 438 (489)
Q Consensus 363 pq~~iL~~~~~~~~i~-HgG~~-s~~eal~~GvP~v~~P~~~-DQ~~na~~v~~~~-G~G~~l~~~~~~~~~~~~~~~~l 438 (489)
+..+++..|++.++-+ +=|+| +++||+++|+|+|+-...+ ..... .++..- ..|+.+... ...+-.-+.++|
T Consensus 467 ~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~--E~v~~~~~~gi~V~~r--~~~~~~e~v~~L 542 (590)
T cd03793 467 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME--EHIEDPESYGIYIVDR--RFKSPDESVQQL 542 (590)
T ss_pred chHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH--HHhccCCCceEEEecC--CccchHHHHHHH
Confidence 4677888999933323 44554 8999999999999987742 22222 222220 256666522 000012356788
Q ss_pred HHHHHHHhc
Q 011311 439 ARAVGCVMD 447 (489)
Q Consensus 439 ~~ai~~vl~ 447 (489)
++++.++++
T Consensus 543 a~~m~~~~~ 551 (590)
T cd03793 543 TQYMYEFCQ 551 (590)
T ss_pred HHHHHHHhC
Confidence 888888886
No 145
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=76.77 E-value=68 Score=30.27 Aligned_cols=80 Identities=25% Similarity=0.363 Sum_probs=50.9
Q ss_pred CCCccccccC---HHHHhccCCcceEEec---CCchh-HHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 354 GRGMICGWAP---QKEVLAHSAIGGFVSH---CGWNS-ILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 354 ~~~~v~~w~p---q~~iL~~~~~~~~i~H---gG~~s-~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
+++.+.+|++ ...++..+++ ++.- .|.|. +.||+++|+|+|.-...+ .. .+...-+.|. +..
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~----~~-e~~~~~~~g~-~~~--- 325 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVGG----IP-EVVEDGETGL-LVP--- 325 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCCC----hH-HHhcCCCceE-ecC---
Confidence 4556678888 3347777877 5555 35544 599999999997766541 11 1223312465 332
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCH
Q 011311 427 RGTENHVMADELARAVGCVMDGDS 450 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~~~~ 450 (489)
....+++.+++..+++ +.
T Consensus 326 -----~~~~~~~~~~i~~~~~-~~ 343 (381)
T COG0438 326 -----PGDVEELADALEQLLE-DP 343 (381)
T ss_pred -----CCCHHHHHHHHHHHhc-CH
Confidence 2268999999999988 44
No 146
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=76.24 E-value=12 Score=35.49 Aligned_cols=37 Identities=24% Similarity=0.259 Sum_probs=33.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
|+++-..+.|++.=+.++.++| +++. ++.+|++++.+
T Consensus 2 ILii~~~~iGD~i~~~p~l~~L--k~~~------P~~~I~~l~~~ 38 (279)
T cd03789 2 ILVIRLSWIGDVVLATPLLRAL--KARY------PDARITVLAPP 38 (279)
T ss_pred EEEEecccHHHHHHHHHHHHHH--HHHC------CCCEEEEEECh
Confidence 8999999999999999999999 8886 66889999876
No 147
>PRK14099 glycogen synthase; Provisional
Probab=75.75 E-value=37 Score=35.40 Aligned_cols=83 Identities=18% Similarity=0.208 Sum_probs=46.2
Q ss_pred cccccCHHH-Hh-ccCCcceEEe---cCCc-hhHHHHHHhCCcEEeccCcc--hhhHHHHHH---HHhhCeEEEeeeccc
Q 011311 358 ICGWAPQKE-VL-AHSAIGGFVS---HCGW-NSILESVWFGVPIVTWPIYA--EQQINAFQM---VRDLGLAVELRLDYR 426 (489)
Q Consensus 358 v~~w~pq~~-iL-~~~~~~~~i~---HgG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~v---~~~~G~G~~l~~~~~ 426 (489)
+.+|-.+.. ++ +.+++ ||. +=|. .+.+||+++|+|.|+....+ |--...... +.. +.|+.++
T Consensus 355 ~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~-~~G~l~~---- 427 (485)
T PRK14099 355 VIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGV-ATGVQFS---- 427 (485)
T ss_pred EeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCC-CceEEeC----
Confidence 446633322 33 45777 764 2333 37789999997766654422 211111000 011 4677665
Q ss_pred cCCCCccCHHHHHHHHHH---HhcCCHHHH
Q 011311 427 RGTENHVMADELARAVGC---VMDGDSEVR 453 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~---vl~~~~~~~ 453 (489)
.-+.++++++|.+ +++ ++..+
T Consensus 428 -----~~d~~~La~ai~~a~~l~~-d~~~~ 451 (485)
T PRK14099 428 -----PVTADALAAALRKTAALFA-DPVAW 451 (485)
T ss_pred -----CCCHHHHHHHHHHHHHHhc-CHHHH
Confidence 3478999999987 555 55433
No 148
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=75.73 E-value=8.1 Score=32.51 Aligned_cols=61 Identities=20% Similarity=0.213 Sum_probs=46.1
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|| +++|++.+.++-+|-.-..-++..| .++| ++|+++...-+ .+.+.+.+. ..+.++
T Consensus 1 ~~-~~~vl~~~~~gD~H~lG~~iv~~~l--r~~G--------~eVi~LG~~vp------~e~i~~~a~------~~~~d~ 57 (137)
T PRK02261 1 MK-KKTVVLGVIGADCHAVGNKILDRAL--TEAG--------FEVINLGVMTS------QEEFIDAAI------ETDADA 57 (137)
T ss_pred CC-CCEEEEEeCCCChhHHHHHHHHHHH--HHCC--------CEEEECCCCCC------HHHHHHHHH------HcCCCE
Confidence 44 7889999999999999999999999 9999 99999976532 235555554 334455
Q ss_pred EEcC
Q 011311 81 IGVP 84 (489)
Q Consensus 81 ~~l~ 84 (489)
+.+.
T Consensus 58 V~lS 61 (137)
T PRK02261 58 ILVS 61 (137)
T ss_pred EEEc
Confidence 5444
No 149
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=74.63 E-value=13 Score=36.13 Aligned_cols=143 Identities=16% Similarity=0.154 Sum_probs=79.1
Q ss_pred HhhhcCCCCceEEEeecC-Cc--CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcC
Q 011311 278 RWLDDQPASSVVFLCFGS-MG--SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKG 354 (489)
Q Consensus 278 ~~l~~~~~~~vV~vs~GS-~~--~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~ 354 (489)
.++....+++.|.+.-|+ .. ..+.+.+.++++.|.+.+.++|+..|++. +.+ .-.......++
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~---------e~~-----~~~~i~~~~~~ 236 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA---------EKQ-----RAERIAEALPG 236 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH---------HHH-----HHHHHHhhCCC
Confidence 344433334555555554 33 56778899999999777888776655431 000 00111111111
Q ss_pred CCcccc--ccCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCC
Q 011311 355 RGMICG--WAPQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTEN 431 (489)
Q Consensus 355 ~~~v~~--w~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~ 431 (489)
..+.+ -++|. .+++++++ ||+. -.|-++=|.+.|+|+|++ ++ +.+..+. .-+|-...+-... .. .
T Consensus 237 -~~l~g~~sL~el~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~l--fg--~t~p~~~-~P~~~~~~~~~~~--~~-~ 304 (319)
T TIGR02193 237 -AVVLPKMSLAEVAALLAGADA--VVGV-DTGLTHLAAALDKPTVTL--YG--ATDPGRT-GGYGKPNVALLGE--SG-A 304 (319)
T ss_pred -CeecCCCCHHHHHHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEE--EC--CCCHhhc-ccCCCCceEEccC--cc-C
Confidence 12222 23444 59999998 8875 567788899999999975 22 1122221 1123221111110 01 2
Q ss_pred ccCHHHHHHHHHHHh
Q 011311 432 HVMADELARAVGCVM 446 (489)
Q Consensus 432 ~~~~~~l~~ai~~vl 446 (489)
.++++++.++++++|
T Consensus 305 ~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 305 NPTPDEVLAALEELL 319 (319)
T ss_pred CCCHHHHHHHHHhhC
Confidence 789999999998765
No 150
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=71.44 E-value=12 Score=38.39 Aligned_cols=86 Identities=13% Similarity=0.162 Sum_probs=59.2
Q ss_pred CCCccc-cccC-H-HHHhccCCcceEEecCC--chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMIC-GWAP-Q-KEVLAHSAIGGFVSHCG--WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~-~w~p-q-~~iL~~~~~~~~i~HgG--~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+|+.+. ++.+ + .+++..|++-+-|+||. ..++.||+.+|+|++..=....... .+ .. |-.+.
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~---~i-~~---g~l~~------ 394 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRD---FI-AS---ENIFE------ 394 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcc---cc-cC---Cceec------
Confidence 444444 7777 3 35999999988888876 6699999999999998765432221 11 21 33333
Q ss_pred CCCccCHHHHHHHHHHHhcCCH-HHHHHH
Q 011311 429 TENHVMADELARAVGCVMDGDS-EVRKRV 456 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~-~~~~~a 456 (489)
.-+.+++.++|.++|. ++ .++++.
T Consensus 395 ---~~~~~~m~~~i~~lL~-d~~~~~~~~ 419 (438)
T TIGR02919 395 ---HNEVDQLISKLKDLLN-DPNQFRELL 419 (438)
T ss_pred ---CCCHHHHHHHHHHHhc-CHHHHHHHH
Confidence 3368999999999998 54 555543
No 151
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=66.57 E-value=47 Score=32.65 Aligned_cols=106 Identities=14% Similarity=0.242 Sum_probs=64.0
Q ss_pred HHhhhcC-CCCceEEEeecCCc---CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhh
Q 011311 277 IRWLDDQ-PASSVVFLCFGSMG---SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERS 352 (489)
Q Consensus 277 ~~~l~~~-~~~~vV~vs~GS~~---~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~ 352 (489)
.+++... .+++.|.+.-|+.. ..+.+.+.++++.|.+.+.++++.-++... + .+ .-..+....
T Consensus 171 ~~~l~~~~~~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~--------e-~~----~~~~i~~~~ 237 (344)
T TIGR02201 171 RALLDEAGVGQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKD--------E-LA----MVNEIAQGC 237 (344)
T ss_pred HHHHHhcCCCCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHH--------H-HH----HHHHHHhhC
Confidence 3445432 13467777777643 567788999999998778887765332200 0 00 001111111
Q ss_pred c-CCCc-cccc--cCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 353 K-GRGM-ICGW--APQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 353 ~-~~~~-v~~w--~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
+ +++. +.+- +.+. .++.++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 238 ~~~~~~~l~g~~sL~el~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 238 QTPRVTSLAGKLTLPQLAALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred CCCcccccCCCCCHHHHHHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 1 1111 2332 3444 59999998 9988 788999999999999986
No 152
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=65.90 E-value=63 Score=28.27 Aligned_cols=31 Identities=13% Similarity=0.063 Sum_probs=22.7
Q ss_pred CCeeEEEeCC--CCchHHHHHHHh------CCCeEEEec
Q 011311 125 VKIAGLVLDF--FCSSMIDTANEL------GVPSYVFFT 155 (489)
Q Consensus 125 ~~~D~VI~D~--~~~~~~~vA~~l------giP~v~~~~ 155 (489)
.+||+||+.- .+.+.+.+|..+ |.+.|.+-+
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES 129 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES 129 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe
Confidence 4899999754 444667788888 898776643
No 153
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=64.76 E-value=40 Score=31.88 Aligned_cols=43 Identities=21% Similarity=0.192 Sum_probs=33.8
Q ss_pred CCccccccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccC
Q 011311 355 RGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPI 400 (489)
Q Consensus 355 ~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~ 400 (489)
.+.+.+-++-.++|.+++. +||-.+ ..-.||+.+|+|++++..
T Consensus 184 ~~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 184 VVIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred eEEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 3344467788899999997 777654 477899999999999764
No 154
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=62.90 E-value=76 Score=25.56 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=31.8
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
|++.+.++-.|.....-++..| .++| ++|.++...
T Consensus 2 vl~~~~~~e~H~lG~~~~~~~l--~~~G--------~~V~~lg~~ 36 (119)
T cd02067 2 VVIATVGGDGHDIGKNIVARAL--RDAG--------FEVIDLGVD 36 (119)
T ss_pred EEEEeeCCchhhHHHHHHHHHH--HHCC--------CEEEECCCC
Confidence 8999999999999999999999 9999 779887644
No 155
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=62.74 E-value=50 Score=29.69 Aligned_cols=35 Identities=11% Similarity=0.202 Sum_probs=22.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQE 52 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~ 52 (489)
|++.-==+. +-.=+..|+++| .+.| |+|+++.+..
T Consensus 3 ILlTNDDGi-~a~Gi~aL~~~L--~~~g--------~~V~VvAP~~ 37 (196)
T PF01975_consen 3 ILLTNDDGI-DAPGIRALAKAL--SALG--------HDVVVVAPDS 37 (196)
T ss_dssp EEEE-SS-T-TSHHHHHHHHHH--TTTS--------SEEEEEEESS
T ss_pred EEEEcCCCC-CCHHHHHHHHHH--HhcC--------CeEEEEeCCC
Confidence 554433322 223466889999 9999 6699999873
No 156
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=60.71 E-value=77 Score=27.10 Aligned_cols=140 Identities=18% Similarity=0.204 Sum_probs=70.3
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHH
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEV 367 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~i 367 (489)
.|-|-.||. -+.+..+++...|++.|..+-..+-... ..|+.+. .++...+-
T Consensus 2 ~V~Ii~gs~--SD~~~~~~a~~~L~~~gi~~~~~V~saH----------------R~p~~l~----------~~~~~~~~ 53 (150)
T PF00731_consen 2 KVAIIMGST--SDLPIAEEAAKTLEEFGIPYEVRVASAH----------------RTPERLL----------EFVKEYEA 53 (150)
T ss_dssp EEEEEESSG--GGHHHHHHHHHHHHHTT-EEEEEE--TT----------------TSHHHHH----------HHHHHTTT
T ss_pred eEEEEeCCH--HHHHHHHHHHHHHHHcCCCEEEEEEecc----------------CCHHHHH----------HHHHHhcc
Confidence 344557773 4677888999999999977655544331 1222211 11111000
Q ss_pred hccCCcceEEecCCch----hHHHHHHhCCcEEeccCcchhhH----HHHHHHHhhCeEEEeeeccccCCCCccCHHHHH
Q 011311 368 LAHSAIGGFVSHCGWN----SILESVWFGVPIVTWPIYAEQQI----NAFQMVRDLGLAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 368 L~~~~~~~~i~HgG~~----s~~eal~~GvP~v~~P~~~DQ~~----na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
..+++ ||.=.|.. ++..++. -.|+|.+|....+.. ....+.---|+++..-.- ++-.++.-++
T Consensus 54 -~~~~v--iIa~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i-----~~~~nAA~~A 124 (150)
T PF00731_consen 54 -RGADV--IIAVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGI-----NNGFNAALLA 124 (150)
T ss_dssp -TTESE--EEEEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SS-----THHHHHHHHH
T ss_pred -CCCEE--EEEECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEc-----cCchHHHHHH
Confidence 13445 88877765 3444444 689999998766432 222322222666543211 0123344444
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011311 440 RAVGCVMDGDSEVRKRVKEVSEKARLA 466 (489)
Q Consensus 440 ~ai~~vl~~~~~~~~~a~~l~~~~~~~ 466 (489)
-.|-.+ . +++++++.++.++++++.
T Consensus 125 ~~ILa~-~-d~~l~~kl~~~~~~~~~~ 149 (150)
T PF00731_consen 125 ARILAL-K-DPELREKLRAYREKMKEK 149 (150)
T ss_dssp HHHHHT-T--HHHHHHHHHHHHHHHHH
T ss_pred HHHHhc-C-CHHHHHHHHHHHHHHHcc
Confidence 444322 3 688999988888887764
No 157
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=58.40 E-value=81 Score=30.78 Aligned_cols=96 Identities=14% Similarity=0.209 Sum_probs=59.2
Q ss_pred CCceEEEeecCC--c--CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCc-cc
Q 011311 285 ASSVVFLCFGSM--G--SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGM-IC 359 (489)
Q Consensus 285 ~~~vV~vs~GS~--~--~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~-v~ 359 (489)
.++.|.+.-|+- . ..+.+.+.++++.|.+.+.++|.. |++. +.+ .-..+.+..++++. +.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~---------e~~-----~~~~i~~~~~~~~~~l~ 237 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAK---------DHP-----AGNEIEALLPGELRNLA 237 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChh---------hHH-----HHHHHHHhCCcccccCC
Confidence 456788877763 2 567888999999987777776654 4431 111 00111112222211 22
Q ss_pred c--ccCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 360 G--WAPQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 360 ~--w~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
+ -+.+. .+++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 238 g~~sL~el~ali~~a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 GETSLDEAVDLIALAKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred CCCCHHHHHHHHHhCCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 2 23343 59999998 8875 456788899999999875
No 158
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=58.30 E-value=24 Score=38.81 Aligned_cols=109 Identities=17% Similarity=0.099 Sum_probs=63.4
Q ss_pred cccccCHHH---HhccCCcceEEec---CCch-hHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 358 ICGWAPQKE---VLAHSAIGGFVSH---CGWN-SILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 358 v~~w~pq~~---iL~~~~~~~~i~H---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
+.+++++.+ +++.+++ |+.- -|+| .+.|++++|+|-...|+..+--.-+..+ .-|+.++
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv~-------- 411 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLVN-------- 411 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEEC--------
Confidence 336677664 7788888 6643 3544 7889999977522222221111111111 2266655
Q ss_pred CccCHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 431 NHVMADELARAVGCVMDGD-SEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
..+.++++++|.++++.+ ++.+++.+++.+.++ .-+...-+++|++.+.+
T Consensus 412 -P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 412 -PNDIEGIAAAIKRALEMPEEEQRERMQAMQERLR-----RYDVHKWASDFLDELRE 462 (726)
T ss_pred -CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHH
Confidence 347999999999999732 344444444444432 24666777777777764
No 159
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=57.14 E-value=30 Score=33.11 Aligned_cols=76 Identities=16% Similarity=0.311 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEE
Q 011311 298 SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFV 377 (489)
Q Consensus 298 ~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i 377 (489)
..+.+..+++.+++.+...+.||.+++.. +-.++.++++...+-.+|.+ ||
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~---------------------------ga~rlL~~ld~~~~~~~pK~--~i 95 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGGY---------------------------GANRLLPYLDYDLIRANPKI--FV 95 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCcC---------------------------CHHHhhhhCCHHHHhhCCeE--EE
Confidence 34556688899999999999999998762 11245566777777788887 99
Q ss_pred ecCCchhHHHHHHh--CCcEEeccCcc
Q 011311 378 SHCGWNSILESVWF--GVPIVTWPIYA 402 (489)
Q Consensus 378 ~HgG~~s~~eal~~--GvP~v~~P~~~ 402 (489)
-..-..+++-+++. |++.+-=|+..
T Consensus 96 GySDiTaL~~~l~~~~g~~t~hGp~~~ 122 (282)
T cd07025 96 GYSDITALHLALYAKTGLVTFHGPMLA 122 (282)
T ss_pred EecHHHHHHHHHHHhcCceEEECcccc
Confidence 88888888888764 88888888653
No 160
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=56.44 E-value=1.1e+02 Score=30.26 Aligned_cols=97 Identities=8% Similarity=0.151 Sum_probs=59.6
Q ss_pred CceEEEeecCCc---CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhc-CC-Ccccc
Q 011311 286 SSVVFLCFGSMG---SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSK-GR-GMICG 360 (489)
Q Consensus 286 ~~vV~vs~GS~~---~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~-~~v~~ 360 (489)
++.|.+.-|+.. ..+.+.+.++++.|.+.+.++++.-++.. .+ ...-..+.+... .+ +-+.+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e----------~e---~~~~~~i~~~~~~~~~~~l~g 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDK----------DD---LACVNEIAQGCQTPPVTALAG 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCCh----------HH---HHHHHHHHHhcCCCccccccC
Confidence 467777777753 56788899999999878888776644331 00 000011111111 11 11233
Q ss_pred c--cCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 361 W--APQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 361 w--~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
- +.+. .++.++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 250 ~~sL~el~ali~~a~l--~v~n-DSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 KTTFPELGALIDHAQL--FIGV-DSAPAHIAAAVNTPLICL 287 (352)
T ss_pred CCCHHHHHHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 2 3444 59999998 8875 457788899999999876
No 161
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=55.87 E-value=2e+02 Score=27.87 Aligned_cols=110 Identities=12% Similarity=0.062 Sum_probs=66.1
Q ss_pred EEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCCCC
Q 011311 9 FIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKMNP 88 (489)
Q Consensus 9 ~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~~ 88 (489)
.+=.+-.-|+.-|-.+-++| .++| |+|.+.+-+.. . -.+.+. .-|+.+..+....
T Consensus 4 wiDI~n~~hvhfFk~lI~el--ekkG--------~ev~iT~rd~~-----~---v~~LLd------~ygf~~~~Igk~g- 58 (346)
T COG1817 4 WIDIGNPPHVHFFKNLIWEL--EKKG--------HEVLITCRDFG-----V---VTELLD------LYGFPYKSIGKHG- 58 (346)
T ss_pred EEEcCCcchhhHHHHHHHHH--HhCC--------eEEEEEEeecC-----c---HHHHHH------HhCCCeEeecccC-
Confidence 34455566888899999999 9999 66666654422 1 122232 2367776666431
Q ss_pred CCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEech
Q 011311 89 PPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTS 156 (489)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~ 156 (489)
. ......+....... -.|.++.. ..+||+.+. -.......+|-.+|+|.+.+.-.
T Consensus 59 --~---~tl~~Kl~~~~eR~-----~~L~ki~~--~~kpdv~i~-~~s~~l~rvafgLg~psIi~~D~ 113 (346)
T COG1817 59 --G---VTLKEKLLESAERV-----YKLSKIIA--EFKPDVAIG-KHSPELPRVAFGLGIPSIIFVDN 113 (346)
T ss_pred --C---ccHHHHHHHHHHHH-----HHHHHHHh--hcCCceEee-cCCcchhhHHhhcCCceEEecCC
Confidence 0 11121111111111 12444444 469999998 56778889999999999988543
No 162
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=54.96 E-value=12 Score=34.79 Aligned_cols=98 Identities=11% Similarity=0.137 Sum_probs=51.8
Q ss_pred CCceEEEeecCCc---CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCC-Ccccc
Q 011311 285 ASSVVFLCFGSMG---SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGR-GMICG 360 (489)
Q Consensus 285 ~~~vV~vs~GS~~---~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~-~~v~~ 360 (489)
+++.|.+..|+.. ..+.+.+.++++.|.+.+++++...+... ..++....+.+ ..+.+ +.+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~---------~~~~~~~~~~~----~~~~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEE---------QEKEIADQIAA----GLQNPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHH---------HHHHHHHHHHT----THTTTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchH---------HHHHHHHHHHH----hcccceEeecC
Confidence 3467777777744 56778899999999988877665443320 00000000111 11111 11222
Q ss_pred c--cCH-HHHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 361 W--APQ-KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 361 w--~pq-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
- +.+ ..++.++++ ||+.- .|.++=|.+.|+|+|++
T Consensus 171 ~~~l~e~~ali~~a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 KTSLRELAALISRADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp TS-HHHHHHHHHTSSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred CCCHHHHHHHHhcCCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 2 233 358899997 88754 57799999999999998
No 163
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=54.88 E-value=23 Score=30.51 Aligned_cols=29 Identities=21% Similarity=0.168 Sum_probs=24.9
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhcCC
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKSGV 316 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~~~ 316 (489)
.+|+++||....+..+++..+.+|.+.+.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~ 31 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALAD 31 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCC
Confidence 69999999887777789999999988775
No 164
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=54.40 E-value=29 Score=29.53 Aligned_cols=72 Identities=10% Similarity=0.125 Sum_probs=52.3
Q ss_pred ccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 011311 398 WPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAAT 477 (489)
Q Consensus 398 ~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 477 (489)
.|....+..+|+.+++. .-+ |. .-..|.|.+.+.+++.+.++-+-.+.++++.+.++ |-.....+
T Consensus 78 yPWt~~~L~aa~el~ee-~ee--Ls---------~deke~~~~sl~dL~~d~PkT~vA~~rfKk~~~K~---g~~v~~~~ 142 (158)
T PF10083_consen 78 YPWTENALEAANELIEE-DEE--LS---------PDEKEQFKESLPDLTKDTPKTKVAATRFKKILSKA---GSIVGDAI 142 (158)
T ss_pred CchHHHHHHHHHHHHHH-hhc--CC---------HHHHHHHHhhhHHHhhcCCccHHHHHHHHHHHHHH---hHHHHHHH
Confidence 78888899999988875 222 22 23568899999999986678888889999998887 55555555
Q ss_pred HHHHHHH
Q 011311 478 GRLIEDL 484 (489)
Q Consensus 478 ~~~~~~~ 484 (489)
..++-++
T Consensus 143 ~dIlVdv 149 (158)
T PF10083_consen 143 RDILVDV 149 (158)
T ss_pred HHHHHHH
Confidence 5555443
No 165
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=53.15 E-value=29 Score=32.36 Aligned_cols=96 Identities=18% Similarity=0.192 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCCCCCCCCCCCChHHH
Q 011311 21 VIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKMNPPPLDYFKSPEKF 100 (489)
Q Consensus 21 ~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~ 100 (489)
+.+|+++| . .+ ++|+++.+. ..++-..... +....++...+...
T Consensus 16 i~aL~~al--~-~~--------~dV~VVAP~-------~~qSg~s~sl----Tl~~Plr~~~~~~~-------------- 59 (252)
T COG0496 16 IRALARAL--R-EG--------ADVTVVAPD-------REQSGASHSL----TLHEPLRVRQVDNG-------------- 59 (252)
T ss_pred HHHHHHHH--h-hC--------CCEEEEccC-------CCCccccccc----ccccCceeeEeccc--------------
Q ss_pred HHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEe----------CCCCchHHHHHH---HhCCCeEEEe
Q 011311 101 ITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVL----------DFFCSSMIDTAN---ELGVPSYVFF 154 (489)
Q Consensus 101 ~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~----------D~~~~~~~~vA~---~lgiP~v~~~ 154 (489)
.......-..+..-.+..+.+ +..||+||+ |..+++++..|. .+|||.+.++
T Consensus 60 ~~av~GTPaDCV~lal~~l~~--~~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S 124 (252)
T COG0496 60 AYAVNGTPADCVILGLNELLK--EPRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAIS 124 (252)
T ss_pred eEEecCChHHHHHHHHHHhcc--CCCCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeee
No 166
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=52.94 E-value=76 Score=30.83 Aligned_cols=136 Identities=15% Similarity=0.050 Sum_probs=74.1
Q ss_pred ceEE-EeecCCc--CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCcccc--c
Q 011311 287 SVVF-LCFGSMG--SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICG--W 361 (489)
Q Consensus 287 ~vV~-vs~GS~~--~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~--w 361 (489)
+.|. +..||.. ..+.+.+.++++.+.+.+.++++..|... + .+ .-+.+.+.. .++.+.+ .
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~---------e-~~----~~~~i~~~~-~~~~l~g~~s 243 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH---------E-EQ----RAKRLAEGF-PYVEVLPKLS 243 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH---------H-HH----HHHHHHccC-CcceecCCCC
Confidence 4443 4444443 56788899999999877888776545431 0 00 001111111 1222322 3
Q ss_pred cCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeE-EEeeeccccCCCCccCHHHHH
Q 011311 362 APQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLA-VELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 362 ~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G-~~l~~~~~~~~~~~~~~~~l~ 439 (489)
+.+. .++.++++ ||+.- .|.++=|.+.|+|+|++=-..|...++- +|-. ..+... ..-. ..++.|++.
T Consensus 244 L~elaali~~a~l--~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p-----~~~~~~~~~~~-~~cm-~~I~~e~V~ 313 (322)
T PRK10964 244 LEQVARVLAGAKA--VVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGG-----YGKNQHACRSP-GKSM-ADLSAETVF 313 (322)
T ss_pred HHHHHHHHHhCCE--EEecC-CcHHHHHHHhCCCEEEEECCCCcccccC-----CCCCceeecCC-Cccc-ccCCHHHHH
Confidence 4444 59999998 99765 5778999999999998622222111110 0110 001100 0000 168999999
Q ss_pred HHHHHHhc
Q 011311 440 RAVGCVMD 447 (489)
Q Consensus 440 ~ai~~vl~ 447 (489)
++++++|+
T Consensus 314 ~~~~~~l~ 321 (322)
T PRK10964 314 QKLETLIS 321 (322)
T ss_pred HHHHHHhh
Confidence 99988774
No 167
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=51.96 E-value=1.9e+02 Score=28.07 Aligned_cols=81 Identities=19% Similarity=0.182 Sum_probs=56.4
Q ss_pred CCCccc-cccC---HHHHhccCCcceEEec--CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecccc
Q 011311 354 GRGMIC-GWAP---QKEVLAHSAIGGFVSH--CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRR 427 (489)
Q Consensus 354 ~~~~v~-~w~p---q~~iL~~~~~~~~i~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 427 (489)
+++.+. +++| +..+|+.|+++-|+|+ =|.|++.-.++.|+|+++-- +=++|.. +.+. |+-+-...+
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqd-l~e~-gv~Vlf~~d--- 277 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQD-LTEQ-GLPVLFTGD--- 277 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHH-HHhC-CCeEEecCC---
Confidence 454443 7776 5679999999777775 48999999999999998753 2233333 3455 777755543
Q ss_pred CCCCccCHHHHHHHHHHHh
Q 011311 428 GTENHVMADELARAVGCVM 446 (489)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl 446 (489)
.++...+.++=+++.
T Consensus 278 ----~L~~~~v~e~~rql~ 292 (322)
T PRK02797 278 ----DLDEDIVREAQRQLA 292 (322)
T ss_pred ----cccHHHHHHHHHHHH
Confidence 788888877754444
No 168
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=49.76 E-value=55 Score=28.43 Aligned_cols=28 Identities=21% Similarity=0.433 Sum_probs=26.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRD 34 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG 34 (489)
++|.+.-.|+.|-.+-.+.++..| ...|
T Consensus 6 mki~ITG~PGvGKtTl~~ki~e~L--~~~g 33 (179)
T COG1618 6 MKIFITGRPGVGKTTLVLKIAEKL--REKG 33 (179)
T ss_pred eEEEEeCCCCccHHHHHHHHHHHH--HhcC
Confidence 459999999999999999999999 9999
No 169
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=49.22 E-value=1.2e+02 Score=29.89 Aligned_cols=96 Identities=13% Similarity=0.149 Sum_probs=58.9
Q ss_pred CCceEEEeecCC--c--CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhc----CCC
Q 011311 285 ASSVVFLCFGSM--G--SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSK----GRG 356 (489)
Q Consensus 285 ~~~vV~vs~GS~--~--~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~----~~~ 356 (489)
+++.|.+.-|+. . ..+.+.+.++++.|.+.+.++|+. |++. +.+. . ..+....+ .++
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~---------e~~~-~----~~i~~~~~~~~~~~~ 243 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAK---------DHEA-G----NEILAALNTEQQAWC 243 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHH---------hHHH-H----HHHHHhcccccccce
Confidence 456788887773 2 567888999999987778887654 4431 1110 0 11111111 111
Q ss_pred -ccccc--cCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 357 -MICGW--APQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 357 -~v~~w--~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
-+.+- +.+. .++.++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 244 ~~l~g~~sL~el~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 244 RNLAGETQLEQAVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred eeccCCCCHHHHHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 12232 3343 49999998 8864 567799999999999875
No 170
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=48.92 E-value=2.9e+02 Score=27.62 Aligned_cols=87 Identities=17% Similarity=0.273 Sum_probs=50.4
Q ss_pred CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCC-----hhhHhhhcCCC--ccccccCHHH---H
Q 011311 298 SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILP-----RGFQERSKGRG--MICGWAPQKE---V 367 (489)
Q Consensus 298 ~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp-----~~~~~~~~~~~--~v~~w~pq~~---i 367 (489)
..+...+..+++++.+.+.++...+..+... ..+...++ .+- ....++. .+.+++||.+ +
T Consensus 191 ~Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~---------~~~~~~~~~~~~~~g~-~~~~g~l~l~~lPF~~Q~~yD~L 260 (374)
T PF10093_consen 191 CYENAALASLLDAWAASPKPVHLLVPEGRAL---------NSLAAWLGDALLQAGD-SWQRGNLTLHVLPFVPQDDYDRL 260 (374)
T ss_pred eCCchHHHHHHHHHhcCCCCeEEEecCCccH---------HHHHHHhccccccCcc-ccccCCeEEEECCCCCHHHHHHH
Confidence 3455557777777777766666555433210 00100111 000 0112333 3459999864 9
Q ss_pred hccCCcceEEecCCchhHHHHHHhCCcEEe
Q 011311 368 LAHSAIGGFVSHCGWNSILESVWFGVPIVT 397 (489)
Q Consensus 368 L~~~~~~~~i~HgG~~s~~eal~~GvP~v~ 397 (489)
|-.|++ .|| =|==|..-|..+|+|.|=
T Consensus 261 Lw~cD~-NfV--RGEDSfVRAqwAgkPFvW 287 (374)
T PF10093_consen 261 LWACDF-NFV--RGEDSFVRAQWAGKPFVW 287 (374)
T ss_pred HHhCcc-ceE--ecchHHHHHHHhCCCceE
Confidence 999997 344 366799999999999874
No 171
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=48.51 E-value=43 Score=32.49 Aligned_cols=76 Identities=9% Similarity=0.147 Sum_probs=57.0
Q ss_pred CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEE
Q 011311 298 SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFV 377 (489)
Q Consensus 298 ~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i 377 (489)
..+.+..+++.+++.+...+.||.+++.- +-.++.++++...|-.||++ ||
T Consensus 49 g~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------------------------g~~rlL~~lD~~~i~~~PK~--fi 99 (308)
T cd07062 49 ASPEERAEELMAAFADPSIKAIIPTIGGD---------------------------DSNELLPYLDYELIKKNPKI--FI 99 (308)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEECCccc---------------------------CHhhhhhhcCHHHHhhCCCE--EE
Confidence 33556688899999999999999988762 11255666777777778877 88
Q ss_pred ecCCchhHHHHHH--hCCcEEeccCcc
Q 011311 378 SHCGWNSILESVW--FGVPIVTWPIYA 402 (489)
Q Consensus 378 ~HgG~~s~~eal~--~GvP~v~~P~~~ 402 (489)
-..-..+++-+++ .|++.+-=|+..
T Consensus 100 GySDiTaL~~al~~~~g~~t~hGp~~~ 126 (308)
T cd07062 100 GYSDITALHLAIYKKTGLVTYYGPNLL 126 (308)
T ss_pred eccHHHHHHHHHHHhcCCeEEECcccc
Confidence 8888888888874 478887777653
No 172
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=48.48 E-value=59 Score=27.50 Aligned_cols=38 Identities=18% Similarity=0.335 Sum_probs=30.2
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEec
Q 011311 285 ASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLR 323 (489)
Q Consensus 285 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~ 323 (489)
...+|++++||.-....+.++++++.+. .+.+++++..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 3469999999988777888999999884 4678887654
No 173
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=47.54 E-value=1.7e+02 Score=24.54 Aligned_cols=28 Identities=25% Similarity=0.240 Sum_probs=23.0
Q ss_pred CccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 14 SVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 14 ~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
.-|=-.-++.|+++| +++| |+|+++++.
T Consensus 11 ~GG~e~~~~~l~~~l--~~~G--------~~v~v~~~~ 38 (177)
T PF13439_consen 11 IGGAERVVLNLARAL--AKRG--------HEVTVVSPG 38 (177)
T ss_dssp SSHHHHHHHHHHHHH--HHTT---------EEEEEESS
T ss_pred CChHHHHHHHHHHHH--HHCC--------CEEEEEEcC
Confidence 556667889999999 9999 779999876
No 174
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=43.94 E-value=56 Score=33.78 Aligned_cols=69 Identities=22% Similarity=0.135 Sum_probs=41.4
Q ss_pred cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHH
Q 011311 379 HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKE 458 (489)
Q Consensus 379 HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~ 458 (489)
|-|. ++.||+++|.|+++.=-.+= +.- +...--|..++.. .-....+++++.++.. |++++.+..+
T Consensus 377 ~FGi-v~IEAMa~glPvvAt~~GGP----~Ei-V~~~~tG~l~dp~-------~e~~~~~a~~~~kl~~-~p~l~~~~~~ 442 (495)
T KOG0853|consen 377 HFGI-VPIEAMACGLPVVATNNGGP----AEI-VVHGVTGLLIDPG-------QEAVAELADALLKLRR-DPELWARMGK 442 (495)
T ss_pred Cccc-eeHHHHhcCCCEEEecCCCc----eEE-EEcCCcceeeCCc-------hHHHHHHHHHHHHHhc-CHHHHHHHHH
Confidence 4443 78999999999998643321 111 2221334443321 2222379999999998 7888766554
Q ss_pred HHH
Q 011311 459 VSE 461 (489)
Q Consensus 459 l~~ 461 (489)
-+.
T Consensus 443 ~G~ 445 (495)
T KOG0853|consen 443 NGL 445 (495)
T ss_pred HHH
Confidence 443
No 175
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=43.54 E-value=3.1e+02 Score=31.24 Aligned_cols=103 Identities=16% Similarity=0.125 Sum_probs=60.1
Q ss_pred ccCHH---HHhccCCcceEEe---cCCchhH-HHHHHhCC---cEEeccCcchhhHHHHHHHHhhC-eEEEeeeccccCC
Q 011311 361 WAPQK---EVLAHSAIGGFVS---HCGWNSI-LESVWFGV---PIVTWPIYAEQQINAFQMVRDLG-LAVELRLDYRRGT 429 (489)
Q Consensus 361 w~pq~---~iL~~~~~~~~i~---HgG~~s~-~eal~~Gv---P~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~ 429 (489)
.+|+. +++..+++ |+- .-|+|-+ .|+++++. -+++++-+.- ++ +.+| -|+.++
T Consensus 447 ~l~~eeL~AlY~~ADV--~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaG----aa---~~L~~~AllVN------- 510 (934)
T PLN03064 447 SLDFHALCALYAVTDV--ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAG----AA---QSLGAGAILVN------- 510 (934)
T ss_pred CCCHHHHHHHHHhCCE--EEeCccccccCchHHHHHHhhcCCCCCeEEeCCCc----hH---HHhCCceEEEC-------
Confidence 35554 46777887 443 4588854 59999954 1222233321 11 2234 456665
Q ss_pred CCccCHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 430 ENHVMADELARAVGCVMD-GDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 430 ~~~~~~~~l~~ai~~vl~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
..+.++++++|.++|+ +.++-+++.+++.+.++. -+...-++.|+++|.+
T Consensus 511 --P~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~-----~d~~~Wa~~fl~~L~~ 561 (934)
T PLN03064 511 --PWNITEVAASIAQALNMPEEEREKRHRHNFMHVTT-----HTAQEWAETFVSELND 561 (934)
T ss_pred --CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccc-----CCHHHHHHHHHHHHHH
Confidence 5689999999999987 334445554444444332 2555667777777764
No 176
>PLN02859 glutamine-tRNA ligase
Probab=43.07 E-value=35 Score=37.36 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=42.6
Q ss_pred HHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCC------HHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHH
Q 011311 412 VRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGD------SEVRKRVKEVSEKARLAL--RDGGSSYAATGRLIED 483 (489)
Q Consensus 412 ~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~------~~~~~~a~~l~~~~~~~~--~~~g~~~~~~~~~~~~ 483 (489)
.+.-|||+. +|+|+|.++|.++++.+ ..|+.|...+-..+++.+ .++..-...|++.+-+
T Consensus 110 ek~CGVGV~------------VT~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~~Lkwad~~~~k~~id~~~~~ 177 (788)
T PLN02859 110 EEACGVGVV------------VSPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRKRLPWADPKIVKKLIDKKLYE 177 (788)
T ss_pred HHhCCCCEE------------ECHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 333499985 58999999999999743 367777777777777653 5555556677666555
Q ss_pred H
Q 011311 484 L 484 (489)
Q Consensus 484 ~ 484 (489)
|
T Consensus 178 l 178 (788)
T PLN02859 178 L 178 (788)
T ss_pred h
Confidence 4
No 177
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=42.91 E-value=2.1e+02 Score=24.69 Aligned_cols=100 Identities=12% Similarity=0.107 Sum_probs=54.3
Q ss_pred ChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhh
Q 011311 272 QRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQER 351 (489)
Q Consensus 272 ~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~ 351 (489)
.-.++-+||.+.. ...|+-|. ........++..+.+-+++=++...... +..+
T Consensus 19 ~A~~lg~~La~~g---~~lv~Gg~-----~GlM~a~a~ga~~~gg~viGVlp~~l~~----------------~~~~--- 71 (159)
T TIGR00725 19 IAYRLGKELAKKG---HILINGGR-----TGVMEAVSKGAREAGGLVVGILPDEDFA----------------GNPY--- 71 (159)
T ss_pred HHHHHHHHHHHCC---CEEEcCCc-----hhHHHHHHHHHHHCCCeEEEECChhhcc----------------CCCC---
Confidence 3456677887643 45555333 2334556666666777776555432100 0000
Q ss_pred hcCCCccccc-cCHHHHhc-cCCcceEEecCCchhHHH---HHHhCCcEEeccC
Q 011311 352 SKGRGMICGW-APQKEVLA-HSAIGGFVSHCGWNSILE---SVWFGVPIVTWPI 400 (489)
Q Consensus 352 ~~~~~~v~~w-~pq~~iL~-~~~~~~~i~HgG~~s~~e---al~~GvP~v~~P~ 400 (489)
.......++ .+...++- .++ ..++--||.||+.| ++.+++|+++++.
T Consensus 72 -~~~~i~~~~~~~Rk~~m~~~sd-a~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 72 -LTIKVKTGMNFARNFILVRSAD-VVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred -ceEEEECCCcchHHHHHHHHCC-EEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 010112233 34455444 444 45666789998765 5889999999885
No 178
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=42.84 E-value=59 Score=34.44 Aligned_cols=92 Identities=22% Similarity=0.210 Sum_probs=50.3
Q ss_pred cCHHHHhccCCcceEEecCC-ch-hHHHHHHhCCcEEeccCc-chhhHHH---HHHHHhhCeEEEeeeccccCCCCccCH
Q 011311 362 APQKEVLAHSAIGGFVSHCG-WN-SILESVWFGVPIVTWPIY-AEQQINA---FQMVRDLGLAVELRLDYRRGTENHVMA 435 (489)
Q Consensus 362 ~pq~~iL~~~~~~~~i~HgG-~~-s~~eal~~GvP~v~~P~~-~DQ~~na---~~v~~~~G~G~~l~~~~~~~~~~~~~~ 435 (489)
+++.+++.-|+++.|-+-== || |-+||+++|||.|.-=+. +-++.+- .. ... |+-+.-+ . .-+.
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~-~~~-GV~VvdR-~-------~~n~ 530 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDP-EEY-GVYVVDR-R-------DKNY 530 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HH-GGG-TEEEE-S-S-------SS-H
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccC-cCC-cEEEEeC-C-------CCCH
Confidence 47889999999987877321 33 889999999999987663 1222221 11 233 7665433 2 3455
Q ss_pred HHHHHHHHHHh----cCCH----HHHHHHHHHHHHH
Q 011311 436 DELARAVGCVM----DGDS----EVRKRVKEVSEKA 463 (489)
Q Consensus 436 ~~l~~ai~~vl----~~~~----~~~~~a~~l~~~~ 463 (489)
++..+.|.+.| .-+. ..|++|+++++++
T Consensus 531 ~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 531 DESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 55555555555 2121 5677777777653
No 179
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=42.37 E-value=2.6e+02 Score=25.17 Aligned_cols=160 Identities=12% Similarity=0.076 Sum_probs=79.0
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhc-CCCccccccCH
Q 011311 286 SSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSK-GRGMICGWAPQ 364 (489)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~v~~w~pq 364 (489)
++++.|+.|.+. ...++.|.+.|..+.+.- .. ..+.+.+... +.+.......+
T Consensus 11 k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs-~~------------------~~~~l~~l~~~~~i~~~~~~~~ 64 (202)
T PRK06718 11 KRVVIVGGGKVA-------GRRAITLLKYGAHIVVIS-PE------------------LTENLVKLVEEGKIRWKQKEFE 64 (202)
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCeEEEEc-CC------------------CCHHHHHHHhCCCEEEEecCCC
Confidence 467777766644 345666666777766553 22 1111111111 22223333334
Q ss_pred HHHhccCCcceEEecCCchhHHHHHH----hCCcEEeccCcchhhHHHH-----HHHHhhCeEEEeeeccccCCCCccCH
Q 011311 365 KEVLAHSAIGGFVSHCGWNSILESVW----FGVPIVTWPIYAEQQINAF-----QMVRDLGLAVELRLDYRRGTENHVMA 435 (489)
Q Consensus 365 ~~iL~~~~~~~~i~HgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~-----~v~~~~G~G~~l~~~~~~~~~~~~~~ 435 (489)
..-|..+++ +|.--+--.+.+.++ .++++-+ .|.+..+. .+.+. ++-+.+... +. ...-+
T Consensus 65 ~~~l~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g-~l~iaIsT~---G~-sP~la 133 (202)
T PRK06718 65 PSDIVDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRG-KLTISVSTD---GA-SPKLA 133 (202)
T ss_pred hhhcCCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcC-CeEEEEECC---CC-ChHHH
Confidence 556777787 888777666666554 4555443 23332221 11111 333334332 11 13344
Q ss_pred HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 436 DELARAVGCVMDGD-SEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 436 ~~l~~ai~~vl~~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
..|++.|++++..+ +.+-+...++...+++...+...-.+.++++++
T Consensus 134 ~~lr~~ie~~~~~~~~~~~~~~~~~R~~~k~~~~~~~~R~~~~~~~~~ 181 (202)
T PRK06718 134 KKIRDELEALYDESYESYIDFLYECRQKIKELQIEKREKQILLQEVLS 181 (202)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhh
Confidence 66888888777522 356666666666666643222223334455543
No 180
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=41.87 E-value=62 Score=29.06 Aligned_cols=105 Identities=10% Similarity=-0.012 Sum_probs=65.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV 83 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l 83 (489)
+.+|++.+.++-.|-....-++..| ..+| ++|+++....+ ...+.+.+. ..+.+++.+
T Consensus 84 ~~~vv~~t~~gd~H~lG~~~v~~~l--~~~G--------~~vi~LG~~vp------~e~~v~~~~------~~~pd~v~l 141 (197)
T TIGR02370 84 LGKVVCGVAEGDVHDIGKNIVVTML--RANG--------FDVIDLGRDVP------IDTVVEKVK------KEKPLMLTG 141 (197)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHH--HhCC--------cEEEECCCCCC------HHHHHHHHH------HcCCCEEEE
Confidence 4689999999999999999999999 9999 99999976533 346666665 334455544
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcC-CCCeeEEEeCCCCchHHHHHHHhCCCe
Q 011311 84 PKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNN-NVKIAGLVLDFFCSSMIDTANELGVPS 150 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~VI~D~~~~~~~~vA~~lgiP~ 150 (489)
...... + ...+.+.++.+.+.. ..++.++|....+. ..+++.+|.=.
T Consensus 142 S~~~~~------~------------~~~~~~~i~~l~~~~~~~~v~i~vGG~~~~--~~~~~~~gad~ 189 (197)
T TIGR02370 142 SALMTT------T------------MYGQKDINDKLKEEGYRDSVKFMVGGAPVT--QDWADKIGADV 189 (197)
T ss_pred cccccc------C------------HHHHHHHHHHHHHcCCCCCCEEEEEChhcC--HHHHHHhCCcE
Confidence 422111 1 112233344443321 12455666665443 45677777653
No 181
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=41.59 E-value=1.1e+02 Score=30.61 Aligned_cols=77 Identities=25% Similarity=0.339 Sum_probs=52.4
Q ss_pred HHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeE-EEeeeccccCCCCccCHHHHHHHHH
Q 011311 365 KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLA-VELRLDYRRGTENHVMADELARAVG 443 (489)
Q Consensus 365 ~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G-~~l~~~~~~~~~~~~~~~~l~~ai~ 443 (489)
..+++++++ +| -.=+-|+.-|++.|+|.|++-+.. .+. .+.+.+|+- ..++.. .++.+.+.+++.
T Consensus 280 ~~~l~~~dl--~V-g~R~HsaI~al~~g~p~i~i~Y~~---K~~-~l~~~~gl~~~~~~i~-------~~~~~~l~~~~~ 345 (385)
T COG2327 280 GGILAACDL--IV-GMRLHSAIMALAFGVPAIAIAYDP---KVR-GLMQDLGLPGFAIDID-------PLDAEILSAVVL 345 (385)
T ss_pred HHHhccCce--EE-eehhHHHHHHHhcCCCeEEEeecH---HHH-HHHHHcCCCcccccCC-------CCchHHHHHHHH
Confidence 447788886 55 234568899999999988887642 222 334555664 223333 789999999999
Q ss_pred HHhcCCHHHHHH
Q 011311 444 CVMDGDSEVRKR 455 (489)
Q Consensus 444 ~vl~~~~~~~~~ 455 (489)
+.+.+.++.|++
T Consensus 346 e~~~~~~~~~~~ 357 (385)
T COG2327 346 ERLTKLDELRER 357 (385)
T ss_pred HHHhccHHHHhh
Confidence 999855665554
No 182
>PF02016 Peptidase_S66: LD-carboxypeptidase; InterPro: IPR003507 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This signature is found in the Escherichia coli microcin C7 self-immunity protein mccF and in muramoyltetrapeptide carboxypeptidase (3.4.17.13 from EC, LD-carboxypeptidase A). LD-carboxypeptidase A belongs to MEROPS peptidase family S66 (clan SS). The entry also contains uncharacterised proteins including hypothetical proteins from various bacteria archaea.; PDB: 1ZRS_A 1ZL0_B 2AUM_B 2AUN_B 3TLG_A 3TLC_A 3TLZ_B 3TLY_B 3TLE_A 3TLB_B ....
Probab=40.20 E-value=61 Score=31.03 Aligned_cols=74 Identities=12% Similarity=0.310 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEe
Q 011311 299 FGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVS 378 (489)
Q Consensus 299 ~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~ 378 (489)
.+.+...++.+++.+..++.||.+++.- +-.++.++++...|-.||.. ||-
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGGy---------------------------g~~rlL~~ld~~~i~~~pK~--~iG 96 (284)
T PF02016_consen 46 SDEERAEDLNEAFADPEIDAIWCARGGY---------------------------GANRLLPYLDYDAIRKNPKI--FIG 96 (284)
T ss_dssp -HHHHHHHHHHHHHSTTEEEEEES--SS----------------------------GGGGGGGCHHHHHHHSG-E--EEE
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEeeccc---------------------------cHHHHHhcccccccccCCCE--EEE
Confidence 3456688899999999999999988752 22367788888889889888 998
Q ss_pred cCCchhHHHHHHh--CCcEEeccCc
Q 011311 379 HCGWNSILESVWF--GVPIVTWPIY 401 (489)
Q Consensus 379 HgG~~s~~eal~~--GvP~v~~P~~ 401 (489)
..-..+++-+++. |++.+-=|+.
T Consensus 97 ySDiTaL~~al~~~~g~~t~hGp~~ 121 (284)
T PF02016_consen 97 YSDITALHNALYAKTGLVTFHGPML 121 (284)
T ss_dssp -GGGHHHHHHHHHHHTBEEEES--H
T ss_pred ecchHHHHHHHHHhCCCeEEEcchh
Confidence 8888888877654 8888888874
No 183
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=40.04 E-value=3e+02 Score=27.17 Aligned_cols=82 Identities=15% Similarity=0.157 Sum_probs=59.4
Q ss_pred CCCcc-ccccC---HHHHhccCCcceEEec--CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecccc
Q 011311 354 GRGMI-CGWAP---QKEVLAHSAIGGFVSH--CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRR 427 (489)
Q Consensus 354 ~~~~v-~~w~p---q~~iL~~~~~~~~i~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 427 (489)
+++.+ .+++| +..+|..|+++-|.|. =|.|++.-.++.|+|++.-- +=+.|- -+.+. |+=+....+
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~---~np~~~-~l~~~-~ipVlf~~d--- 316 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSR---DNPFWQ-DLKEQ-GIPVLFYGD--- 316 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEec---CChHHH-HHHhC-CCeEEeccc---
Confidence 35544 47887 5569999999766664 58999999999999988743 334444 33565 777655433
Q ss_pred CCCCccCHHHHHHHHHHHhc
Q 011311 428 GTENHVMADELARAVGCVMD 447 (489)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl~ 447 (489)
.++...|+++=+++..
T Consensus 317 ----~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 317 ----ELDEALVREAQRQLAN 332 (360)
T ss_pred ----cCCHHHHHHHHHHHhh
Confidence 8999999999887764
No 184
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=39.94 E-value=2.4e+02 Score=25.44 Aligned_cols=147 Identities=12% Similarity=0.102 Sum_probs=72.5
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhh-hcCCCccccccCH
Q 011311 286 SSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQER-SKGRGMICGWAPQ 364 (489)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-~~~~~~v~~w~pq 364 (489)
++++.|+.|... ..-++.|.+.|..+.+.-... .+.+.+- ..+++..+.--.+
T Consensus 10 k~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp~~-------------------~~~l~~l~~~~~i~~~~~~~~ 63 (205)
T TIGR01470 10 RAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAEEL-------------------ESELTLLAEQGGITWLARCFD 63 (205)
T ss_pred CeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcCCC-------------------CHHHHHHHHcCCEEEEeCCCC
Confidence 457777666533 334556667888776553221 0111111 1123333211123
Q ss_pred HHHhccCCcceEEecCCchhHHH-----HHHhCCcEEe--ccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHH
Q 011311 365 KEVLAHSAIGGFVSHCGWNSILE-----SVWFGVPIVT--WPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADE 437 (489)
Q Consensus 365 ~~iL~~~~~~~~i~HgG~~s~~e-----al~~GvP~v~--~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~ 437 (489)
...|..+.+ +|..-|...+.+ |-..|+|+-+ -|-..|=.+=| . ++.=++-+.+... +.. ..-+..
T Consensus 64 ~~dl~~~~l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa-~-~~~g~l~iaisT~---G~s-P~la~~ 135 (205)
T TIGR01470 64 ADILEGAFL--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPS-I-VDRSPVVVAISSG---GAA-PVLARL 135 (205)
T ss_pred HHHhCCcEE--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEee-E-EEcCCEEEEEECC---CCC-cHHHHH
Confidence 445667776 777777664443 3456888833 33333322212 2 2331343444332 111 334567
Q ss_pred HHHHHHHHhcCC-HHHHHHHHHHHHHHHHH
Q 011311 438 LARAVGCVMDGD-SEVRKRVKEVSEKARLA 466 (489)
Q Consensus 438 l~~ai~~vl~~~-~~~~~~a~~l~~~~~~~ 466 (489)
|++.|++++..+ ..+-+...++...+++.
T Consensus 136 lr~~ie~~l~~~~~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 136 LRERIETLLPPSLGDLATLAATWRDAVKKR 165 (205)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHhh
Confidence 888888888521 35555666666666554
No 185
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=39.04 E-value=43 Score=29.39 Aligned_cols=31 Identities=23% Similarity=0.421 Sum_probs=21.4
Q ss_pred ccCCcceEEecCCchhHHHHHHhCCcEEeccCcc
Q 011311 369 AHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYA 402 (489)
Q Consensus 369 ~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 402 (489)
..+++ +|++||...++.... ++|+|-+|..+
T Consensus 33 ~g~dV--iIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 33 EGADV--IISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TT-SE--EEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred cCCeE--EEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 34555 999999999999887 99999999853
No 186
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=38.98 E-value=57 Score=28.19 Aligned_cols=28 Identities=25% Similarity=0.275 Sum_probs=21.4
Q ss_pred cceEEecCCch------hHHHHHHhCCcEEeccC
Q 011311 373 IGGFVSHCGWN------SILESVWFGVPIVTWPI 400 (489)
Q Consensus 373 ~~~~i~HgG~~------s~~eal~~GvP~v~~P~ 400 (489)
.+++++|.|-| .+.+|...++|+|++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 33377777744 67889999999999963
No 187
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=38.88 E-value=1.5e+02 Score=28.45 Aligned_cols=70 Identities=14% Similarity=-0.023 Sum_probs=40.4
Q ss_pred EEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCC
Q 011311 249 VYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKT 325 (489)
Q Consensus 249 ~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~ 325 (489)
-+++|....++.. ......|+.....+..-.++-.-........+...+..+.++.++.|.++++-+|..
T Consensus 98 drf~~~~~v~p~~-------~~~a~~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~ 167 (293)
T COG2159 98 DRFVGFARVDPRD-------PEAAAEELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAG 167 (293)
T ss_pred cceeeeeeeCCCc-------hHHHHHHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4566655444331 012345666666654322222222222223444557899999999999999988765
No 188
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=37.03 E-value=2.1e+02 Score=27.04 Aligned_cols=30 Identities=17% Similarity=0.001 Sum_probs=22.5
Q ss_pred CCeeEEEe-----CCCCc-hHHHHHHHhCCCeEEEe
Q 011311 125 VKIAGLVL-----DFFCS-SMIDTANELGVPSYVFF 154 (489)
Q Consensus 125 ~~~D~VI~-----D~~~~-~~~~vA~~lgiP~v~~~ 154 (489)
.++|+|++ |..+. -+..+|+.||+|++.+.
T Consensus 110 ~~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v 145 (260)
T COG2086 110 IGPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYV 145 (260)
T ss_pred cCCCEEEEecccccCCccchHHHHHHHhCCceeeeE
Confidence 47888985 44333 56889999999998764
No 189
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=36.30 E-value=1.6e+02 Score=25.40 Aligned_cols=27 Identities=11% Similarity=0.150 Sum_probs=22.1
Q ss_pred ceEEecCCch------hHHHHHHhCCcEEeccC
Q 011311 374 GGFVSHCGWN------SILESVWFGVPIVTWPI 400 (489)
Q Consensus 374 ~~~i~HgG~~------s~~eal~~GvP~v~~P~ 400 (489)
+++++|+|-| ++.+|...++|+|++.-
T Consensus 65 ~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~g 97 (164)
T cd07039 65 GVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIAG 97 (164)
T ss_pred EEEEECCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 3488888855 78899999999999963
No 190
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=36.28 E-value=51 Score=21.62 Aligned_cols=26 Identities=27% Similarity=0.519 Sum_probs=17.3
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHH
Q 011311 434 MADELARAVGCVMDGDSEVRKRVKEV 459 (489)
Q Consensus 434 ~~~~l~~ai~~vl~~~~~~~~~a~~l 459 (489)
|+|+|.+||..+.++.-.+++.|+..
T Consensus 1 tee~l~~Ai~~v~~g~~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKMSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTSS-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 57899999998887334666665543
No 191
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=35.90 E-value=5.3e+02 Score=26.92 Aligned_cols=108 Identities=13% Similarity=0.071 Sum_probs=69.3
Q ss_pred ccccccCHHH---HhccCCcceEEe--cCCchhH-HHHHHhCC----cEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 357 MICGWAPQKE---VLAHSAIGGFVS--HCGWNSI-LESVWFGV----PIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 357 ~v~~w~pq~~---iL~~~~~~~~i~--HgG~~s~-~eal~~Gv----P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
++.+.+|+.+ ++.-+++ ++|| .-|+|-+ .|.++++. |+|+=-+.+ |+ +.+.-++.++
T Consensus 365 ~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa---~~l~~AllVN---- 431 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA---VELKGALLTN---- 431 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch---hhcCCCEEEC----
Confidence 4457778665 6777887 3444 4588854 59999877 444332221 21 2234466665
Q ss_pred cCCCCccCHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhhC
Q 011311 427 RGTENHVMADELARAVGCVMDGD-SEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
..+.++++++|.++|+-. ++-++|.+++.+.++.. ....=.+.|+++|..+
T Consensus 432 -----P~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~-----d~~~W~~~fl~~l~~~ 483 (487)
T TIGR02398 432 -----PYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYY-----DVQRWADEFLAAVSPQ 483 (487)
T ss_pred -----CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhC-----CHHHHHHHHHHHhhhc
Confidence 568999999999999832 35556666666655543 5566788899888765
No 192
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=34.90 E-value=93 Score=27.98 Aligned_cols=107 Identities=16% Similarity=0.156 Sum_probs=64.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV 83 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l 83 (489)
+.+|++.+.++-.|-....=++..| ...| ++|+++....+ ...+.+.+. ..+.+++.+
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l--~~~G--------~~vi~lG~~~p------~~~l~~~~~------~~~~d~v~l 139 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATML--EANG--------FEVIDLGRDVP------PEEFVEAVK------EHKPDILGL 139 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHH--HHCC--------CEEEECCCCCC------HHHHHHHHH------HcCCCEEEE
Confidence 5689999999999999999999999 9999 88988865422 235566554 334445444
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcC-CCCeeEEEeCCCCchHHHHHHHhCCCeEE
Q 011311 84 PKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNN-NVKIAGLVLDFFCSSMIDTANELGVPSYV 152 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~VI~D~~~~~~~~vA~~lgiP~v~ 152 (489)
...... . ...+.+.++.+.+.. ..++.++|...... ...++.+|.=.+.
T Consensus 140 S~~~~~------~------------~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~--~~~~~~~GaD~~~ 189 (201)
T cd02070 140 SALMTT------T------------MGGMKEVIEALKEAGLRDKVKVMVGGAPVN--QEFADEIGADGYA 189 (201)
T ss_pred eccccc------c------------HHHHHHHHHHHHHCCCCcCCeEEEECCcCC--HHHHHHcCCcEEE
Confidence 422110 1 112233344443321 12455666665443 3578888876443
No 193
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=34.79 E-value=87 Score=30.13 Aligned_cols=55 Identities=16% Similarity=0.162 Sum_probs=37.0
Q ss_pred HhccCCcceEEecCCchhHHHHHHh----CCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHH
Q 011311 367 VLAHSAIGGFVSHCGWNSILESVWF----GVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAV 442 (489)
Q Consensus 367 iL~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai 442 (489)
+-..+++ +|+-||=||+++++.. ++|++.+-.. .+|... .++.+++.++|
T Consensus 60 ~~~~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~G--------------~lGFL~----------~~~~~~~~~~l 113 (291)
T PRK02155 60 IGARADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINHG--------------RLGFIT----------DIPLDDMQETL 113 (291)
T ss_pred hccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------Cccccc----------cCCHHHHHHHH
Confidence 3345677 9999999999999774 6787776521 112211 45667777777
Q ss_pred HHHhc
Q 011311 443 GCVMD 447 (489)
Q Consensus 443 ~~vl~ 447 (489)
.++++
T Consensus 114 ~~~~~ 118 (291)
T PRK02155 114 PPMLA 118 (291)
T ss_pred HHHHc
Confidence 77775
No 194
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=34.59 E-value=1.3e+02 Score=26.09 Aligned_cols=24 Identities=21% Similarity=0.242 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHHhhhh-cCCCCCCCCeEEEEEE
Q 011311 17 HLVSVIVFAKRLLLLD-RDNAAGSNNSFSITVL 48 (489)
Q Consensus 17 Hi~P~l~la~~L~~~~-rG~~~~~~h~~~Vt~~ 48 (489)
|.+..-+|+++| .+ +| ++++|.++
T Consensus 1 H~~aA~Al~eal--~~~~~------~~~~v~v~ 25 (169)
T PF06925_consen 1 HNSAARALAEAL--ERRRG------PDAEVEVV 25 (169)
T ss_pred CHHHHHHHHHHH--HhhcC------CCCEEEEE
Confidence 788889999999 77 56 55666655
No 195
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=33.20 E-value=1e+02 Score=27.62 Aligned_cols=73 Identities=19% Similarity=0.304 Sum_probs=54.8
Q ss_pred CHHHH-HHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhc-cCCcceEE
Q 011311 300 GEEQI-QEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLA-HSAIGGFV 377 (489)
Q Consensus 300 ~~~~~-~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~-~~~~~~~i 377 (489)
+.+.+ .++++.|.+.+..+|...|.. ..|.+.|.++-+++ ||. ||++ .=
T Consensus 63 ~r~~~d~~l~~~l~~~~~dlvvLAGyM----------------rIL~~~fl~~~~gr-----------IlNIHPSL--LP 113 (200)
T COG0299 63 SREAFDRALVEALDEYGPDLVVLAGYM----------------RILGPEFLSRFEGR-----------ILNIHPSL--LP 113 (200)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcchH----------------HHcCHHHHHHhhcc-----------eEecCccc--cc
Confidence 44444 459999999999999887765 33666666555443 222 8998 88
Q ss_pred ecCCchhHHHHHHhCCcEEeccCc
Q 011311 378 SHCGWNSILESVWFGVPIVTWPIY 401 (489)
Q Consensus 378 ~HgG~~s~~eal~~GvP~v~~P~~ 401 (489)
.++|..+..+|+.+|+..-++-.+
T Consensus 114 ~f~G~h~~~~A~~aG~k~sG~TVH 137 (200)
T COG0299 114 AFPGLHAHEQALEAGVKVSGCTVH 137 (200)
T ss_pred CCCCchHHHHHHHcCCCccCcEEE
Confidence 999999999999999998776654
No 196
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=33.12 E-value=82 Score=27.37 Aligned_cols=32 Identities=16% Similarity=0.308 Sum_probs=23.1
Q ss_pred CCCceEEEeecCCcCCCHHHHHHHHHHHhhcC
Q 011311 284 PASSVVFLCFGSMGSFGEEQIQEIASGLEKSG 315 (489)
Q Consensus 284 ~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~ 315 (489)
+.+..||+++||....+.+.+...++.|.+.+
T Consensus 5 ~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~~ 36 (163)
T PRK14092 5 PASALAYVGLGANLGDAAATLRSVLAELAAAP 36 (163)
T ss_pred CcCCEEEEEecCchHhHHHHHHHHHHHHHhCC
Confidence 34457999999976555666777788887643
No 197
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.06 E-value=1.4e+02 Score=28.82 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=39.5
Q ss_pred HhccCCcceEEecCCchhHHHHHH----hCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHH
Q 011311 367 VLAHSAIGGFVSHCGWNSILESVW----FGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAV 442 (489)
Q Consensus 367 iL~~~~~~~~i~HgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai 442 (489)
+...+++ +|+=||=||++.+.. .++|++++-.. .+|..- .++.+++.++|
T Consensus 65 ~~~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~----------~~~~~~~~~~l 118 (296)
T PRK04539 65 LGQYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT----------QIPREYMTDKL 118 (296)
T ss_pred cCcCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee----------ccCHHHHHHHH
Confidence 3345777 999999999999975 37898887642 133221 46778888888
Q ss_pred HHHhcC
Q 011311 443 GCVMDG 448 (489)
Q Consensus 443 ~~vl~~ 448 (489)
++++++
T Consensus 119 ~~i~~g 124 (296)
T PRK04539 119 LPVLEG 124 (296)
T ss_pred HHHHcC
Confidence 888863
No 198
>PLN02470 acetolactate synthase
Probab=32.39 E-value=1.1e+02 Score=32.68 Aligned_cols=28 Identities=18% Similarity=0.360 Sum_probs=23.4
Q ss_pred CcceEEecCCch------hHHHHHHhCCcEEecc
Q 011311 372 AIGGFVSHCGWN------SILESVWFGVPIVTWP 399 (489)
Q Consensus 372 ~~~~~i~HgG~~------s~~eal~~GvP~v~~P 399 (489)
.++++++|.|-| ++.+|...++|+|++.
T Consensus 76 ~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 76 KVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 355588998855 7899999999999995
No 199
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=32.24 E-value=4e+02 Score=24.36 Aligned_cols=48 Identities=17% Similarity=0.216 Sum_probs=34.6
Q ss_pred hhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEE
Q 011311 273 RDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWS 321 (489)
Q Consensus 273 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~ 321 (489)
.+.+.+|+.+. .+++.||=+-|...-.....++..++|++.|..+.-.
T Consensus 21 ~~~i~n~l~g~-~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L 68 (224)
T COG3340 21 LPFIANFLQGK-RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSEL 68 (224)
T ss_pred hHHHHHHhcCC-CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeee
Confidence 44555666554 3579999888866555567888999999999987643
No 200
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=31.35 E-value=1e+02 Score=24.67 Aligned_cols=73 Identities=11% Similarity=0.080 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCc-------cccccCHHHHhccCC
Q 011311 300 GEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGM-------ICGWAPQKEVLAHSA 372 (489)
Q Consensus 300 ~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~-------v~~w~pq~~iL~~~~ 372 (489)
+.+...++++++++.|+++|.+...... ....+ +..+..+ ...|+....|+.-+.
T Consensus 10 rGeia~r~~ra~r~~Gi~tv~v~s~~d~----------------~s~~~--~~ad~~~~~~~~~~~~~yl~~e~I~~ia~ 71 (110)
T PF00289_consen 10 RGEIAVRIIRALRELGIETVAVNSNPDT----------------VSTHV--DMADEAYFEPPGPSPESYLNIEAIIDIAR 71 (110)
T ss_dssp -HHHHHHHHHHHHHTTSEEEEEEEGGGT----------------TGHHH--HHSSEEEEEESSSGGGTTTSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCcceeccCchhc----------------ccccc--cccccceecCcchhhhhhccHHHHhhHhh
Confidence 3445678999999999999988875521 00000 1112222 235777666554221
Q ss_pred -cceEEecCCchhHHHHHH
Q 011311 373 -IGGFVSHCGWNSILESVW 390 (489)
Q Consensus 373 -~~~~i~HgG~~s~~eal~ 390 (489)
-++...|+|+|-+.|...
T Consensus 72 ~~g~~~i~pGyg~lse~~~ 90 (110)
T PF00289_consen 72 KEGADAIHPGYGFLSENAE 90 (110)
T ss_dssp HTTESEEESTSSTTTTHHH
T ss_pred hhcCcccccccchhHHHHH
Confidence 145889999998777643
No 201
>PF08766 DEK_C: DEK C terminal domain; InterPro: IPR014876 DEK is a chromatin associated protein that is linked with cancers and autoimmune disease. This domain is found at the C-terminal of DEK and is of clinical importance since it can reverse the characteristic abnormal DNA-mutagen sensitivity in fibroblasts from ataxia-telangiectasia (A-T) patients []. The structure of this domain shows it to be homologous to the E2F/DP transcription factor family []. This domain is also found in chitin synthase proteins like Q8TF96 from SWISSPROT, and in protein phosphatases such as Q6NN85 from SWISSPROT. ; PDB: 1Q1V_A.
Probab=30.99 E-value=1.7e+02 Score=19.84 Aligned_cols=50 Identities=16% Similarity=0.116 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHHHHH
Q 011311 434 MADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGG-SSYAATGRLIED 483 (489)
Q Consensus 434 ~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g-~~~~~~~~~~~~ 483 (489)
|.++|+++|+++|.+..--.--.+++.+++.+..+-.= +-...|+++|.+
T Consensus 1 td~~i~~~i~~iL~~~dl~~vT~k~vr~~Le~~~~~dL~~~K~~I~~~I~~ 51 (54)
T PF08766_consen 1 TDEEIREAIREILREADLDTVTKKQVREQLEERFGVDLSSRKKFIKELIDE 51 (54)
T ss_dssp -HHHHHHHHHHHHTTS-GGG--HHHHHHHHHHH-SS--SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHhHhhHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 45788888888886322111223344444444432221 223355555544
No 202
>PLN02929 NADH kinase
Probab=30.71 E-value=80 Score=30.47 Aligned_cols=65 Identities=15% Similarity=0.222 Sum_probs=44.0
Q ss_pred cCCcceEEecCCchhHHHHHH---hCCcEEeccCcc------hhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHH
Q 011311 370 HSAIGGFVSHCGWNSILESVW---FGVPIVTWPIYA------EQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELAR 440 (489)
Q Consensus 370 ~~~~~~~i~HgG~~s~~eal~---~GvP~v~~P~~~------DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ 440 (489)
.+++ +|+-||=||++.+.. .++|++++-... .+++|.-. +.+ -+|..- .++.+++.+
T Consensus 64 ~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~r-~lGfL~----------~~~~~~~~~ 129 (301)
T PLN02929 64 DVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD-ARR-STGHLC----------AATAEDFEQ 129 (301)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc-ccc-Cccccc----------cCCHHHHHH
Confidence 4566 999999999999855 478998887642 12333311 111 345322 567899999
Q ss_pred HHHHHhcC
Q 011311 441 AVGCVMDG 448 (489)
Q Consensus 441 ai~~vl~~ 448 (489)
+|.+++++
T Consensus 130 ~L~~il~g 137 (301)
T PLN02929 130 VLDDVLFG 137 (301)
T ss_pred HHHHHHcC
Confidence 99999974
No 203
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=30.53 E-value=1.3e+02 Score=26.32 Aligned_cols=106 Identities=21% Similarity=0.233 Sum_probs=61.9
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHH
Q 011311 286 SSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQK 365 (489)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~ 365 (489)
+.+-.+++|.+. +++++-++..|.+++..-+... . . ..+. . ....+.+-.
T Consensus 37 ~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~~---------------~-~-~~~~----~--~~~~~~~l~ 86 (178)
T PF02826_consen 37 KTVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSPK---------------P-E-EGAD----E--FGVEYVSLD 86 (178)
T ss_dssp SEEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSCH---------------H-H-HHHH----H--TTEEESSHH
T ss_pred CEEEEEEEcCCc-------CeEeeeeecCCceeEEecccCC---------------h-h-hhcc----c--ccceeeehh
Confidence 457788888866 5677777788998876654331 0 0 0010 0 223667888
Q ss_pred HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeE-EEeeeccccCCCCccCHHHHHHHHHH
Q 011311 366 EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLA-VELRLDYRRGTENHVMADELARAVGC 444 (489)
Q Consensus 366 ~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G-~~l~~~~~~~~~~~~~~~~l~~ai~~ 444 (489)
++|+.+++ ++-|+-.+. ...+..|++.+... +-| +.++.. +++.++.+.|.+++++
T Consensus 87 ell~~aDi--v~~~~plt~----------------~T~~li~~~~l~~m-k~ga~lvN~a----RG~~vde~aL~~aL~~ 143 (178)
T PF02826_consen 87 ELLAQADI--VSLHLPLTP----------------ETRGLINAEFLAKM-KPGAVLVNVA----RGELVDEDALLDALES 143 (178)
T ss_dssp HHHHH-SE--EEE-SSSST----------------TTTTSBSHHHHHTS-TTTEEEEESS----SGGGB-HHHHHHHHHT
T ss_pred hhcchhhh--hhhhhcccc----------------ccceeeeeeeeecc-ccceEEEecc----chhhhhhhHHHHHHhh
Confidence 99999998 887776442 13456667666443 544 334432 2347888888888753
No 204
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=29.94 E-value=1.3e+02 Score=29.22 Aligned_cols=56 Identities=20% Similarity=0.221 Sum_probs=39.9
Q ss_pred HhccCCcceEEecCCchhHHHHHHh----CCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHH
Q 011311 367 VLAHSAIGGFVSHCGWNSILESVWF----GVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAV 442 (489)
Q Consensus 367 iL~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai 442 (489)
+...+++ +|+=||=||++.+... ++|++++... .+|..- .+..+++.+++
T Consensus 69 ~~~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~----------~~~~~~~~~~l 122 (306)
T PRK03372 69 AADGCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA----------EAEAEDLDEAV 122 (306)
T ss_pred cccCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec----------cCCHHHHHHHH
Confidence 3345677 9999999999999764 8898888652 123221 45678888888
Q ss_pred HHHhcC
Q 011311 443 GCVMDG 448 (489)
Q Consensus 443 ~~vl~~ 448 (489)
.+++++
T Consensus 123 ~~i~~g 128 (306)
T PRK03372 123 ERVVDR 128 (306)
T ss_pred HHHHcC
Confidence 888863
No 205
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=29.55 E-value=1.8e+02 Score=25.86 Aligned_cols=84 Identities=6% Similarity=0.028 Sum_probs=47.8
Q ss_pred eccCcchhhHHHHHHHHhhCeEEEeeeccccCC-----CCccCHHHHH----HHHHHHhcCCHHHHHHHHHHHHHHH---
Q 011311 397 TWPIYAEQQINAFQMVRDLGLAVELRLDYRRGT-----ENHVMADELA----RAVGCVMDGDSEVRKRVKEVSEKAR--- 464 (489)
Q Consensus 397 ~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~-----~~~~~~~~l~----~ai~~vl~~~~~~~~~a~~l~~~~~--- 464 (489)
+.|...||......+-+.+-+|+....--++++ =..+..+.++ +-|+++|. |+.+-+|-+++.+.+.
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~-d~~IIRnr~KI~Avi~NA~ 100 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQ-DAGIIRHRGKIQAIIGNAR 100 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhc-CchhHHhHHHHHHHHHHHH
Confidence 456789999888877777777776432101000 0145666664 66778887 5544333333333322
Q ss_pred ---HHHhcCCChHHHHHHHH
Q 011311 465 ---LALRDGGSSYAATGRLI 481 (489)
Q Consensus 465 ---~~~~~~g~~~~~~~~~~ 481 (489)
+-..++||-..++=.|+
T Consensus 101 ~~l~i~~e~gSf~~ylW~fv 120 (187)
T PRK10353 101 AYLQMEQNGEPFADFVWSFV 120 (187)
T ss_pred HHHHHHHhcCCHHHHHhhcc
Confidence 22345788777775554
No 206
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=29.45 E-value=5e+02 Score=24.67 Aligned_cols=37 Identities=24% Similarity=0.381 Sum_probs=28.9
Q ss_pred cccCHHHHhccCCcceEEecC-CchhHHHHHHhCCcEEec
Q 011311 360 GWAPQKEVLAHSAIGGFVSHC-GWNSILESVWFGVPIVTW 398 (489)
Q Consensus 360 ~w~pq~~iL~~~~~~~~i~Hg-G~~s~~eal~~GvP~v~~ 398 (489)
++=|+.++|+.++. +|.-. -.|-..||++.|.|+-++
T Consensus 234 g~NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 234 GYNPYIDMLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CCCchHHHHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 45599999999887 66555 467788999999998653
No 207
>PRK06321 replicative DNA helicase; Provisional
Probab=29.31 E-value=3.4e+02 Score=28.17 Aligned_cols=38 Identities=8% Similarity=0.320 Sum_probs=32.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhh-hcCCCCCCCCeEEEEEEEcCCC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLL-DRDNAAGSNNSFSITVLVMQEH 53 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~-~rG~~~~~~h~~~Vt~~~~~~~ 53 (489)
-|++..-|++|-..-.+.+|..+ + ..| ..|.|++.+..
T Consensus 228 LiiiaarPgmGKTafal~ia~~~--a~~~g--------~~v~~fSLEMs 266 (472)
T PRK06321 228 LMILAARPAMGKTALALNIAENF--CFQNR--------LPVGIFSLEMT 266 (472)
T ss_pred EEEEEeCCCCChHHHHHHHHHHH--HHhcC--------CeEEEEeccCC
Confidence 47888899999999999999998 6 457 66999998854
No 208
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=29.16 E-value=1.3e+02 Score=28.99 Aligned_cols=57 Identities=19% Similarity=0.346 Sum_probs=40.3
Q ss_pred HHhccCCcceEEecCCchhHHHHHHh----CCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHH
Q 011311 366 EVLAHSAIGGFVSHCGWNSILESVWF----GVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARA 441 (489)
Q Consensus 366 ~iL~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~a 441 (489)
.+...+++ +|+=||=||++.++.. ++|++++-... +|. +. .++.+++.++
T Consensus 60 ~~~~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G~--------------lGF-Lt---------~~~~~~~~~~ 113 (292)
T PRK01911 60 ELDGSADM--VISIGGDGTFLRTATYVGNSNIPILGINTGR--------------LGF-LA---------TVSKEEIEET 113 (292)
T ss_pred hcccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecCC--------------CCc-cc---------ccCHHHHHHH
Confidence 34445677 9999999999999873 78888775521 222 11 4677888888
Q ss_pred HHHHhcC
Q 011311 442 VGCVMDG 448 (489)
Q Consensus 442 i~~vl~~ 448 (489)
+++++++
T Consensus 114 l~~i~~g 120 (292)
T PRK01911 114 IDELLNG 120 (292)
T ss_pred HHHHHcC
Confidence 8888873
No 209
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=29.11 E-value=1.1e+02 Score=28.76 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=23.1
Q ss_pred CeeEEEe-----CCCCc-hHHHHHHHhCCCeEEEech
Q 011311 126 KIAGLVL-----DFFCS-SMIDTANELGVPSYVFFTS 156 (489)
Q Consensus 126 ~~D~VI~-----D~~~~-~~~~vA~~lgiP~v~~~~~ 156 (489)
.+|+|++ |.... -+..+|+.||+|++.+...
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 5999997 43332 4578999999999887543
No 210
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=28.93 E-value=1.9e+02 Score=24.87 Aligned_cols=19 Identities=26% Similarity=0.475 Sum_probs=11.8
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 011311 449 DSEVRKRVKEVSEKARLAL 467 (489)
Q Consensus 449 ~~~~~~~a~~l~~~~~~~~ 467 (489)
|++++++.+..++..++.+
T Consensus 130 d~~l~~kl~~~r~~~~~~v 148 (156)
T TIGR01162 130 DPELAEKLKEYRENQKEEV 148 (156)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 5666666666666665543
No 211
>PRK06932 glycerate dehydrogenase; Provisional
Probab=28.71 E-value=2.9e+02 Score=26.88 Aligned_cols=62 Identities=23% Similarity=0.398 Sum_probs=40.4
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHH
Q 011311 286 SSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQK 365 (489)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~ 365 (489)
+.+..|++|.+. +++++-++.+|.+++.. .... ... ....+.+-.
T Consensus 148 ktvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~~------------------~~~---------~~~~~~~l~ 192 (314)
T PRK06932 148 STLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHKG------------------ASV---------CREGYTPFE 192 (314)
T ss_pred CEEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCCc------------------ccc---------cccccCCHH
Confidence 458889998866 45666667788887643 2110 000 011356778
Q ss_pred HHhccCCcceEEecCCchh
Q 011311 366 EVLAHSAIGGFVSHCGWNS 384 (489)
Q Consensus 366 ~iL~~~~~~~~i~HgG~~s 384 (489)
++|+.+++ ++-|+-.+.
T Consensus 193 ell~~sDi--v~l~~Plt~ 209 (314)
T PRK06932 193 EVLKQADI--VTLHCPLTE 209 (314)
T ss_pred HHHHhCCE--EEEcCCCCh
Confidence 99999998 888887653
No 212
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.69 E-value=1.3e+02 Score=28.92 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=24.8
Q ss_pred HHhccCCcceEEecCCchhHHHHHH----hCCcEEeccC
Q 011311 366 EVLAHSAIGGFVSHCGWNSILESVW----FGVPIVTWPI 400 (489)
Q Consensus 366 ~iL~~~~~~~~i~HgG~~s~~eal~----~GvP~v~~P~ 400 (489)
++...+++ +|+-||=||++.++. .++|++++-.
T Consensus 60 ~~~~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~ 96 (287)
T PRK14077 60 ELFKISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHA 96 (287)
T ss_pred hcccCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeC
Confidence 33445777 999999999998866 3778777654
No 213
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=28.54 E-value=1.6e+02 Score=29.54 Aligned_cols=70 Identities=20% Similarity=0.206 Sum_probs=46.2
Q ss_pred cceEEecCCchhHHHHHHh------------C-----CcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCH
Q 011311 373 IGGFVSHCGWNSILESVWF------------G-----VPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMA 435 (489)
Q Consensus 373 ~~~~i~HgG~~s~~eal~~------------G-----vP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~ 435 (489)
.++++|.||..+.+-|+.+ | .|.|.++-.. ++.+.+ .+..+|+|+..-.- +++++++.
T Consensus 104 ~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~K-aa~~lGlg~~~I~~---~~~~~md~ 178 (373)
T PF00282_consen 104 AGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEK-AARILGLGVRKIPT---DEDGRMDI 178 (373)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHH-HHHHTTSEEEEE-B---BTTSSB-H
T ss_pred CceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHH-hcceeeeEEEEecC---CcchhhhH
Confidence 5689999999988877533 2 4577776655 455553 45778999543211 12357899
Q ss_pred HHHHHHHHHHhc
Q 011311 436 DELARAVGCVMD 447 (489)
Q Consensus 436 ~~l~~ai~~vl~ 447 (489)
++|+++|++..+
T Consensus 179 ~~L~~~l~~~~~ 190 (373)
T PF00282_consen 179 EALEKALEKDIA 190 (373)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHhhhhhccccc
Confidence 999999987764
No 214
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=28.02 E-value=1.4e+02 Score=27.29 Aligned_cols=49 Identities=10% Similarity=0.089 Sum_probs=40.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhh
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLA 68 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~ 68 (489)
+.+|++.+.++-.|-....=++..| ..+| ++|+++....+ ...+.+.+.
T Consensus 88 ~~~vvl~t~~gd~HdiG~~iv~~~l--~~~G--------~~Vi~LG~~vp------~e~~v~~~~ 136 (213)
T cd02069 88 KGKIVLATVKGDVHDIGKNLVGVIL--SNNG--------YEVIDLGVMVP------IEKILEAAK 136 (213)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHH--HhCC--------CEEEECCCCCC------HHHHHHHHH
Confidence 5789999999999999999999999 9999 88999976532 335666665
No 215
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=28.01 E-value=3.3e+02 Score=22.06 Aligned_cols=36 Identities=19% Similarity=0.240 Sum_probs=32.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
||++.+.++-.|-.-..-++.-| ...| ++|.++...
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l--~~~G--------~~vi~lG~~ 36 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARAL--RDAG--------FEVIYTGLR 36 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHH--HHCC--------CEEEECCCC
Confidence 38999999999999999999999 9999 889999765
No 216
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=27.55 E-value=2.9e+02 Score=24.57 Aligned_cols=65 Identities=20% Similarity=0.315 Sum_probs=40.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKM 86 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~ 86 (489)
|+|+..+..-|--=+..+++.| ++.| .+|.+++......+......|.+.+. ...+-+|+.+|.+
T Consensus 111 vi~v~S~~~~d~~~i~~~~~~l--kk~~--------I~v~vI~~G~~~~~~~~l~~~~~~~~-----~~~~s~~~~~~~~ 175 (187)
T cd01452 111 VAFVGSPIEEDEKDLVKLAKRL--KKNN--------VSVDIINFGEIDDNTEKLTAFIDAVN-----GKDGSHLVSVPPG 175 (187)
T ss_pred EEEEecCCcCCHHHHHHHHHHH--HHcC--------CeEEEEEeCCCCCCHHHHHHHHHHhc-----CCCCceEEEeCCC
Confidence 7777777677766677888999 8888 88877765533112222334555442 2334677777754
No 217
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=27.35 E-value=99 Score=23.01 Aligned_cols=28 Identities=18% Similarity=0.055 Sum_probs=25.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRD 34 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG 34 (489)
.-++++..+...|..-+-.+|+.| .+.|
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L--~~~G 43 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFL--AEQG 43 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHH--HhCC
Confidence 458889999999999999999999 9999
No 218
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=27.16 E-value=6.3e+02 Score=25.08 Aligned_cols=62 Identities=19% Similarity=0.285 Sum_probs=48.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEE
Q 011311 2 KEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFI 81 (489)
Q Consensus 2 ~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 81 (489)
.+|.|++++-.+-.||---|.-=|.-| ++.| ++|.++..-.. .. .+.+. ..++++++
T Consensus 10 ~~k~ra~vvVLGDvGRSPRMqYHA~Sl--a~~g--------f~VdliGy~~s-------~p-~e~l~-----~hprI~ih 66 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDVGRSPRMQYHALSL--AKLG--------FQVDLIGYVES-------IP-LEELL-----NHPRIRIH 66 (444)
T ss_pred cccceEEEEEecccCCChHHHHHHHHH--HHcC--------CeEEEEEecCC-------CC-hHHHh-----cCCceEEE
Confidence 357899999999999999999999999 9999 99999975422 12 23332 27899999
Q ss_pred EcCCC
Q 011311 82 GVPKM 86 (489)
Q Consensus 82 ~l~~~ 86 (489)
.++..
T Consensus 67 ~m~~l 71 (444)
T KOG2941|consen 67 GMPNL 71 (444)
T ss_pred eCCCC
Confidence 99864
No 219
>PRK12342 hypothetical protein; Provisional
Probab=26.97 E-value=1.2e+02 Score=28.56 Aligned_cols=30 Identities=10% Similarity=-0.063 Sum_probs=22.5
Q ss_pred CeeEEEeCCC-----Cc-hHHHHHHHhCCCeEEEec
Q 011311 126 KIAGLVLDFF-----CS-SMIDTANELGVPSYVFFT 155 (489)
Q Consensus 126 ~~D~VI~D~~-----~~-~~~~vA~~lgiP~v~~~~ 155 (489)
.+|+|++.-. .. -+..+|+.||+|++.+..
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 5999997332 22 367899999999988754
No 220
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=26.92 E-value=3.1e+02 Score=26.06 Aligned_cols=92 Identities=14% Similarity=0.136 Sum_probs=59.3
Q ss_pred HHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcC
Q 011311 275 EIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKG 354 (489)
Q Consensus 275 ~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~ 354 (489)
+..++|.+.+ .++|+++|+ +......+...|...|.+++......
T Consensus 122 ~av~~L~~A~--rI~~~G~g~----S~~vA~~~~~~l~~ig~~~~~~~d~~----------------------------- 166 (281)
T COG1737 122 RAVELLAKAR--RIYFFGLGS----SGLVASDLAYKLMRIGLNVVALSDTH----------------------------- 166 (281)
T ss_pred HHHHHHHcCC--eEEEEEech----hHHHHHHHHHHHHHcCCceeEecchH-----------------------------
Confidence 3445666643 366666655 34445567777777888876543221
Q ss_pred CCccccccCHHHHhccCCcceEEecCCch-----hHHHHHHhCCcEEeccCcchhhH
Q 011311 355 RGMICGWAPQKEVLAHSAIGGFVSHCGWN-----SILESVWFGVPIVTWPIYAEQQI 406 (489)
Q Consensus 355 ~~~v~~w~pq~~iL~~~~~~~~i~HgG~~-----s~~eal~~GvP~v~~P~~~DQ~~ 406 (489)
.. | -+...+..-++-.+|+|.|.. .+..|-..|+|+|.+--..+-|.
T Consensus 167 --~~--~-~~~~~~~~~Dv~i~iS~sG~t~e~i~~a~~ak~~ga~vIaiT~~~~spl 218 (281)
T COG1737 167 --GQ--L-MQLALLTPGDVVIAISFSGYTREIVEAAELAKERGAKVIAITDSADSPL 218 (281)
T ss_pred --HH--H-HHHHhCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEcCCCCCch
Confidence 01 1 256677777787899999976 44556778999999887766654
No 221
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.46 E-value=1.4e+02 Score=28.73 Aligned_cols=54 Identities=24% Similarity=0.307 Sum_probs=39.2
Q ss_pred ccCCcceEEecCCchhHHHHHH----hCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHH
Q 011311 369 AHSAIGGFVSHCGWNSILESVW----FGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGC 444 (489)
Q Consensus 369 ~~~~~~~~i~HgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~ 444 (489)
..+++ +|+=||=||+++++. .++|++++... .+|. +. .++.+++.++|.+
T Consensus 61 ~~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGF-l~---------~~~~~~~~~~l~~ 114 (295)
T PRK01231 61 EVCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGF-LT---------DIRPDELEFKLAE 114 (295)
T ss_pred cCCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------cccc-cc---------cCCHHHHHHHHHH
Confidence 34666 999999999999975 36788877652 1221 11 5678889999988
Q ss_pred HhcC
Q 011311 445 VMDG 448 (489)
Q Consensus 445 vl~~ 448 (489)
++++
T Consensus 115 ~~~g 118 (295)
T PRK01231 115 VLDG 118 (295)
T ss_pred HHcC
Confidence 8873
No 222
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=26.36 E-value=96 Score=26.24 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=34.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
++++|++.+.+.-||=.-.--+++.| +..| ++|......
T Consensus 11 ~rprvlvak~GlDgHd~gakvia~~l--~d~G--------feVi~~g~~ 49 (143)
T COG2185 11 ARPRVLVAKLGLDGHDRGAKVIARAL--ADAG--------FEVINLGLF 49 (143)
T ss_pred CCceEEEeccCccccccchHHHHHHH--HhCC--------ceEEecCCc
Confidence 47999999999999999999999999 9999 888877543
No 223
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=26.24 E-value=44 Score=31.89 Aligned_cols=40 Identities=28% Similarity=0.489 Sum_probs=32.9
Q ss_pred cCCchhHH--HHHHhCCcEEeccCcchhhHHHHHHHHhhCeE
Q 011311 379 HCGWNSIL--ESVWFGVPIVTWPIYAEQQINAFQMVRDLGLA 418 (489)
Q Consensus 379 HgG~~s~~--eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G 418 (489)
=||||+++ .|-.+||-++++-+...|..+++.-++..|+-
T Consensus 80 GCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 80 GCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 58998664 56667999999999999999999855555888
No 224
>PRK11253 ldcA L,D-carboxypeptidase A; Provisional
Probab=26.15 E-value=2.1e+02 Score=27.68 Aligned_cols=73 Identities=14% Similarity=0.165 Sum_probs=44.4
Q ss_pred CCCHHHHHHHHHHH--hhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhc----cC
Q 011311 298 SFGEEQIQEIASGL--EKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLA----HS 371 (489)
Q Consensus 298 ~~~~~~~~~~~~al--~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~----~~ 371 (489)
..+.+...++.+++ .+. .+.||.+++.- +..++.++++...+-. +|
T Consensus 48 gtd~~Ra~dL~~a~a~~dp-i~aI~~~rGGy---------------------------g~~rlLp~Ld~~~i~~~~k~~P 99 (305)
T PRK11253 48 GTDGERLADLNSLADLTTP-NTIVLAVRGGY---------------------------GASRLLAGIDWQGLAARQQDDP 99 (305)
T ss_pred CCHHHHHHHHHHHHhcCCC-ccEEEEecccC---------------------------CHhHhhhhCCHHHHhhhhccCC
Confidence 44556688898888 666 99999998762 1123444554444443 34
Q ss_pred CcceEEecCCchhHHHHH--HhCCcEEeccC
Q 011311 372 AIGGFVSHCGWNSILESV--WFGVPIVTWPI 400 (489)
Q Consensus 372 ~~~~~i~HgG~~s~~eal--~~GvP~v~~P~ 400 (489)
.+ ||-..-...++-++ ..|+..+-=|+
T Consensus 100 K~--~iGySDiTaL~~al~~~~g~~t~hGp~ 128 (305)
T PRK11253 100 LL--IVGHSDFTAIQLALLAQANVITFSGPM 128 (305)
T ss_pred CE--EEEEcHHHHHHHHHHHhcCceEEECcc
Confidence 44 66666666666665 35666665554
No 225
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=25.94 E-value=2.1e+02 Score=24.17 Aligned_cols=64 Identities=13% Similarity=0.129 Sum_probs=49.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV 83 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l 83 (489)
+.+|+|++.-+.+|+.-.+.+.+.+ +... +++.+.++.-. -...+++.+. ....++++..+
T Consensus 59 ~~~vvfVSa~S~~h~~~~~~~i~si--~~~~------P~~k~ilY~Lg-------L~~~~i~~L~----~~~~n~evr~F 119 (142)
T PF07801_consen 59 SSDVVFVSATSDNHFNESMKSISSI--RKFY------PNHKIILYDLG-------LSEEQIKKLK----KNFCNVEVRKF 119 (142)
T ss_pred CCccEEEEEecchHHHHHHHHHHHH--HHHC------CCCcEEEEeCC-------CCHHHHHHHH----hcCCceEEEEC
Confidence 4689999999999999999999999 8887 66778888654 2335677775 22367888888
Q ss_pred CCC
Q 011311 84 PKM 86 (489)
Q Consensus 84 ~~~ 86 (489)
+..
T Consensus 120 n~s 122 (142)
T PF07801_consen 120 NFS 122 (142)
T ss_pred CCc
Confidence 754
No 226
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=25.75 E-value=3.7e+02 Score=23.80 Aligned_cols=36 Identities=25% Similarity=0.379 Sum_probs=22.8
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEc
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVM 50 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~ 50 (489)
++.+=..+.|-++-..+|+++| .++. .++.|.+-++
T Consensus 23 ~iWiHa~SvGE~~a~~~Li~~l--~~~~------p~~~illT~~ 58 (186)
T PF04413_consen 23 LIWIHAASVGEVNAARPLIKRL--RKQR------PDLRILLTTT 58 (186)
T ss_dssp -EEEE-SSHHHHHHHHHHHHHH--TT---------TS-EEEEES
T ss_pred cEEEEECCHHHHHHHHHHHHHH--HHhC------CCCeEEEEec
Confidence 3444466899999999999999 8873 2255655554
No 227
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=24.85 E-value=3.4e+02 Score=28.88 Aligned_cols=27 Identities=15% Similarity=0.342 Sum_probs=22.4
Q ss_pred cceEEecCCch------hHHHHHHhCCcEEecc
Q 011311 373 IGGFVSHCGWN------SILESVWFGVPIVTWP 399 (489)
Q Consensus 373 ~~~~i~HgG~~------s~~eal~~GvP~v~~P 399 (489)
.+++++|.|-| .+.||...++|+|++-
T Consensus 79 ~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 79 PGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34489998866 6789999999999984
No 228
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=24.80 E-value=2.6e+02 Score=28.14 Aligned_cols=65 Identities=26% Similarity=0.282 Sum_probs=39.7
Q ss_pred cCCcceEEecCCchhHHHHHHhCCcEEe-----------ccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHH
Q 011311 370 HSAIGGFVSHCGWNSILESVWFGVPIVT-----------WPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADEL 438 (489)
Q Consensus 370 ~~~~~~~i~HgG~~s~~eal~~GvP~v~-----------~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l 438 (489)
|-.+-++-|+ |..++..|+.+|.|+-. +|..+.|-+ ++++.+-..+. .++.+++
T Consensus 242 ~vkIIGVEt~-~a~~f~~sl~~g~~V~lp~i~s~AdglaV~~Vg~~tf---~~a~~~~d~vv-----------vV~~~ei 306 (457)
T KOG1250|consen 242 HVKIIGVETE-GAHSFNASLKAGKPVTLPKITSLADGLAVKTVGENTF---ELAQKLVDRVV-----------VVEDDEI 306 (457)
T ss_pred CCceEEEeec-CcHHHHHHHhcCCeeecccccchhcccccchhhHHHH---HHHHhcCceEE-----------EeccHHH
Confidence 4444445555 56789999999988632 333444433 33332122211 5788999
Q ss_pred HHHHHHHhcCCH
Q 011311 439 ARAVGCVMDGDS 450 (489)
Q Consensus 439 ~~ai~~vl~~~~ 450 (489)
..+|.++++ ++
T Consensus 307 ~aaI~~l~e-de 317 (457)
T KOG1250|consen 307 AAAILRLFE-DE 317 (457)
T ss_pred HHHHHHHHH-hh
Confidence 999999998 44
No 229
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=24.65 E-value=7e+02 Score=24.77 Aligned_cols=145 Identities=14% Similarity=0.246 Sum_probs=76.6
Q ss_pred CCCceEEEeecCCcCCCHHHHHHHHHHHhh---------cC--CeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhh
Q 011311 284 PASSVVFLCFGSMGSFGEEQIQEIASGLEK---------SG--VRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERS 352 (489)
Q Consensus 284 ~~~~vV~vs~GS~~~~~~~~~~~~~~al~~---------~~--~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~ 352 (489)
++++-++||--| ..+.+.+..+++||.. .+ .-+...+|++.. ++.......+..
T Consensus 252 ~~~pallvsSTs--wTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl-------------kE~Y~~~I~~~~ 316 (444)
T KOG2941|consen 252 PERPALLVSSTS--WTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL-------------KEKYSQEIHEKN 316 (444)
T ss_pred cCCCeEEEecCC--CCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-------------hHHHHHHHHHhc
Confidence 356778886544 4455667777887761 12 233334443311 111111111111
Q ss_pred cCCCccc-ccc---CHHHHhccCCcceEEecCCch-----hHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeee
Q 011311 353 KGRGMIC-GWA---PQKEVLAHSAIGGFVSHCGWN-----SILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRL 423 (489)
Q Consensus 353 ~~~~~v~-~w~---pq~~iL~~~~~~~~i~HgG~~-----s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 423 (489)
=.++.+. .|+ ++..+|+.+++|.-+|-.-.| -+..-.-+|+|++.+-+--=+ .+++.---|...
T Consensus 317 ~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~-----ELVkh~eNGlvF-- 389 (444)
T KOG2941|consen 317 LQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLD-----ELVKHGENGLVF-- 389 (444)
T ss_pred ccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHH-----HHHhcCCCceEe--
Confidence 1345555 786 456699999998777766554 233444466666655543211 223331334332
Q ss_pred ccccCCCCccCHHHHHHHHHHHhcC---C----HHHHHHHHHH
Q 011311 424 DYRRGTENHVMADELARAVGCVMDG---D----SEVRKRVKEV 459 (489)
Q Consensus 424 ~~~~~~~~~~~~~~l~~ai~~vl~~---~----~~~~~~a~~l 459 (489)
-+.+++++.+..++++ + .++++|+++-
T Consensus 390 ---------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 390 ---------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred ---------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 3678999999888873 1 1556665554
No 230
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=24.33 E-value=76 Score=26.13 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=29.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
||++...++.+=+. ...+.++| .++| ++|.++.++
T Consensus 2 ~i~l~vtGs~~~~~-~~~~l~~L--~~~g--------~~v~vv~S~ 36 (129)
T PF02441_consen 2 RILLGVTGSIAAYK-APDLLRRL--KRAG--------WEVRVVLSP 36 (129)
T ss_dssp EEEEEE-SSGGGGG-HHHHHHHH--HTTT--------SEEEEEESH
T ss_pred EEEEEEECHHHHHH-HHHHHHHH--hhCC--------CEEEEEECC
Confidence 48888888877777 99999999 9999 669988766
No 231
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=24.26 E-value=70 Score=27.72 Aligned_cols=29 Identities=21% Similarity=0.440 Sum_probs=22.9
Q ss_pred cCCcceEEecCCch------hHHHHHHhCCcEEeccC
Q 011311 370 HSAIGGFVSHCGWN------SILESVWFGVPIVTWPI 400 (489)
Q Consensus 370 ~~~~~~~i~HgG~~------s~~eal~~GvP~v~~P~ 400 (489)
.+.+ +++|+|-| .+.||...++|||++.-
T Consensus 60 ~~gv--~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 60 RPVA--VVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred CCEE--EEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 3444 88888855 77899999999999953
No 232
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=24.16 E-value=1.3e+02 Score=29.73 Aligned_cols=28 Identities=18% Similarity=0.078 Sum_probs=18.8
Q ss_pred CeeEEEe--CCCCc-hHHHHHHHhCCCeEEE
Q 011311 126 KIAGLVL--DFFCS-SMIDTANELGVPSYVF 153 (489)
Q Consensus 126 ~~D~VI~--D~~~~-~~~~vA~~lgiP~v~~ 153 (489)
+||+||+ |.+.. .++.+|..++||++=+
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~Hi 97 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHI 97 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEE
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEe
Confidence 7787774 77665 4577899999996544
No 233
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.08 E-value=1.6e+02 Score=28.32 Aligned_cols=56 Identities=14% Similarity=0.272 Sum_probs=38.5
Q ss_pred HhccCCcceEEecCCchhHHHHHH----hCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHH
Q 011311 367 VLAHSAIGGFVSHCGWNSILESVW----FGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAV 442 (489)
Q Consensus 367 iL~~~~~~~~i~HgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai 442 (489)
+...+++ +|+=||=||++.++. .++|++.+-... +|. +. .++.+++.+++
T Consensus 60 ~~~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G~------------lGF---l~---------~~~~~~~~~~l 113 (292)
T PRK03378 60 IGQQADL--AIVVGGDGNMLGAARVLARYDIKVIGINRGN------------LGF---LT---------DLDPDNALQQL 113 (292)
T ss_pred cCCCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECCC------------CCc---cc---------ccCHHHHHHHH
Confidence 3345677 999999999999975 367877765421 122 11 45678888888
Q ss_pred HHHhcC
Q 011311 443 GCVMDG 448 (489)
Q Consensus 443 ~~vl~~ 448 (489)
++++++
T Consensus 114 ~~i~~g 119 (292)
T PRK03378 114 SDVLEG 119 (292)
T ss_pred HHHHcC
Confidence 888863
No 234
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=24.04 E-value=7.1e+02 Score=24.60 Aligned_cols=62 Identities=11% Similarity=0.103 Sum_probs=43.2
Q ss_pred cccCHHHHhccCCcceEEe------cCCchhHHHHHHhCCcEEe-ccCcchhhHHHHHHHHhhCeEEEe
Q 011311 360 GWAPQKEVLAHSAIGGFVS------HCGWNSILESVWFGVPIVT-WPIYAEQQINAFQMVRDLGLAVEL 421 (489)
Q Consensus 360 ~w~pq~~iL~~~~~~~~i~------HgG~~s~~eal~~GvP~v~-~P~~~DQ~~na~~v~~~~G~G~~l 421 (489)
-|-...++|..+++.++.+ +-+.--+.+++.+|+.++| -|+..++-.-..+++++.|+=+.+
T Consensus 52 ~y~~~eell~d~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~v 120 (343)
T TIGR01761 52 LYCEVEELPDDIDIACVVVRSAIVGGQGSALARALLARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLV 120 (343)
T ss_pred ccCCHHHHhcCCCEEEEEeCCCCCCccHHHHHHHHHhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4667788998888877774 3445678889999999998 788765555544555554554444
No 235
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=23.60 E-value=1.2e+02 Score=26.54 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=23.9
Q ss_pred HHHHHhcCCCCeeEEEeCCCCch--HHHHHHHhCCCeEEE
Q 011311 116 IIEHVLNNNVKIAGLVLDFFCSS--MIDTANELGVPSYVF 153 (489)
Q Consensus 116 l~~~~~~~~~~~D~VI~D~~~~~--~~~vA~~lgiP~v~~ 153 (489)
++.++. -+||+||....... .....+..|||++.+
T Consensus 62 ~E~ll~---l~PDlii~~~~~~~~~~~~~l~~~gIpvv~i 98 (186)
T cd01141 62 VELIVA---LKPDLVILYGGFQAQTILDKLEQLGIPVLYV 98 (186)
T ss_pred HHHHhc---cCCCEEEEecCCCchhHHHHHHHcCCCEEEe
Confidence 556654 58999997554332 445567899998776
No 236
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.52 E-value=1.7e+02 Score=28.29 Aligned_cols=56 Identities=18% Similarity=0.239 Sum_probs=38.7
Q ss_pred HhccCCcceEEecCCchhHHHHHHh----CCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHH
Q 011311 367 VLAHSAIGGFVSHCGWNSILESVWF----GVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAV 442 (489)
Q Consensus 367 iL~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai 442 (489)
+...+++ +|+=||=||++.+... ++|++++-.. .+|.. . .++.+++.++|
T Consensus 65 ~~~~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~G--------------~lGFL-t---------~~~~~~~~~~l 118 (305)
T PRK02649 65 FDSSMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINTG--------------HLGFL-T---------EAYLNQLDEAI 118 (305)
T ss_pred cccCcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeCC--------------CCccc-c---------cCCHHHHHHHH
Confidence 3345676 9999999999999774 7898887541 12211 1 45677888888
Q ss_pred HHHhcC
Q 011311 443 GCVMDG 448 (489)
Q Consensus 443 ~~vl~~ 448 (489)
++++++
T Consensus 119 ~~l~~g 124 (305)
T PRK02649 119 DQVLAG 124 (305)
T ss_pred HHHHcC
Confidence 888763
No 237
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=23.38 E-value=2.6e+02 Score=29.11 Aligned_cols=99 Identities=17% Similarity=0.160 Sum_probs=58.2
Q ss_pred HHhccCCcceEEe--cCCchhH-HHHHHhCCc---EEeccCcchhhHHHHHHHHhhC-eEEEeeeccccCCCCccCHHHH
Q 011311 366 EVLAHSAIGGFVS--HCGWNSI-LESVWFGVP---IVTWPIYAEQQINAFQMVRDLG-LAVELRLDYRRGTENHVMADEL 438 (489)
Q Consensus 366 ~iL~~~~~~~~i~--HgG~~s~-~eal~~GvP---~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~~~~~l 438 (489)
.++..+++ ++|| ..|+|.+ .|-+++-.+ ++++--+ .-| ++.++ .++.++ ..+.+++
T Consensus 368 aly~~aDv-~lvTslrDGmNLva~Eyva~q~~~~GvLiLSef----aGa---a~~L~~~al~VN---------P~d~~~~ 430 (474)
T PF00982_consen 368 ALYRAADV-ALVTSLRDGMNLVAKEYVACQDDNPGVLILSEF----AGA---AEQLSEAALLVN---------PWDIEEV 430 (474)
T ss_dssp HHHHH-SE-EEE--SSBS--HHHHHHHHHS-TS--EEEEETT----BGG---GGT-TTS-EEE----------TT-HHHH
T ss_pred HHHHhhhh-EEecchhhccCCcceEEEEEecCCCCceEeecc----CCH---HHHcCCccEEEC---------CCChHHH
Confidence 47778887 5555 6898855 577777655 3333322 223 23345 446665 5689999
Q ss_pred HHHHHHHhc-CCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 439 ARAVGCVMD-GDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 439 ~~ai~~vl~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
++||.+.|+ +.++-++|.+++.+.++.. ....=.++|+++|++
T Consensus 431 A~ai~~AL~M~~~Er~~r~~~~~~~v~~~-----~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 431 ADAIHEALTMPPEERKERHARLREYVREH-----DVQWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHT--HHHHHHHHHHHHHHHHHT------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHhHhC-----CHHHHHHHHHHHhhC
Confidence 999999997 2345666666666666654 567788899998874
No 238
>PRK04940 hypothetical protein; Provisional
Probab=23.26 E-value=2.3e+02 Score=25.02 Aligned_cols=31 Identities=6% Similarity=-0.139 Sum_probs=24.0
Q ss_pred CeeEEEeCCCCc-hHHHHHHHhCCCeEEEech
Q 011311 126 KIAGLVLDFFCS-SMIDTANELGVPSYVFFTS 156 (489)
Q Consensus 126 ~~D~VI~D~~~~-~~~~vA~~lgiP~v~~~~~ 156 (489)
+++++|...+-. |+.-+|+++|+|.|++.|.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPA 91 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPN 91 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCC
Confidence 456777665544 7888999999999998764
No 239
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=22.99 E-value=4.5e+02 Score=25.88 Aligned_cols=21 Identities=10% Similarity=0.080 Sum_probs=16.7
Q ss_pred HHHHHHHhhcCCeEEEEecCC
Q 011311 305 QEIASGLEKSGVRFLWSLRKT 325 (489)
Q Consensus 305 ~~~~~al~~~~~~~vw~~~~~ 325 (489)
..+++.+.+.+.+++.+.|..
T Consensus 190 ~~LL~~va~~~kPViLk~G~~ 210 (335)
T PRK08673 190 FDLLKEVGKTNKPVLLKRGMS 210 (335)
T ss_pred HHHHHHHHcCCCcEEEeCCCC
Confidence 457777778999999998754
No 240
>PRK09165 replicative DNA helicase; Provisional
Probab=22.80 E-value=3.4e+02 Score=28.40 Aligned_cols=38 Identities=11% Similarity=0.110 Sum_probs=31.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhhhc---------------CCCCCCCCeEEEEEEEcCCC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLLDR---------------DNAAGSNNSFSITVLVMQEH 53 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~~r---------------G~~~~~~h~~~Vt~~~~~~~ 53 (489)
-+++..-|+.|-..-.+.+|... +.+ | ..|.|++.+..
T Consensus 219 livIaarpg~GKT~~al~ia~~~--a~~~~~~~~~~~~~~~~~g--------~~vl~fSlEMs 271 (497)
T PRK09165 219 LIILAGRPSMGKTALATNIAFNA--AKAYRREAQPDGSKKAVNG--------GVVGFFSLEMS 271 (497)
T ss_pred eEEEEeCCCCChHHHHHHHHHHH--HHhhcccccccccccccCC--------CeEEEEeCcCC
Confidence 47888899999999999999988 643 5 56999998854
No 241
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=22.71 E-value=2.8e+02 Score=23.31 Aligned_cols=28 Identities=7% Similarity=0.169 Sum_probs=22.0
Q ss_pred CCcceEEecCCc------hhHHHHHHhCCcEEeccC
Q 011311 371 SAIGGFVSHCGW------NSILESVWFGVPIVTWPI 400 (489)
Q Consensus 371 ~~~~~~i~HgG~------~s~~eal~~GvP~v~~P~ 400 (489)
+.+ +++|+|- +.+.+|...++|+|++.-
T Consensus 60 ~~v--~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 60 PGV--VLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CEE--EEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 444 8888764 478889999999999864
No 242
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=22.70 E-value=7.2e+02 Score=24.21 Aligned_cols=95 Identities=14% Similarity=0.155 Sum_probs=59.2
Q ss_pred CceEEEeec-CCc---CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccc
Q 011311 286 SSVVFLCFG-SMG---SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGW 361 (489)
Q Consensus 286 ~~vV~vs~G-S~~---~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w 361 (489)
++.|.++-| |-. ..+.+.+.++++.|.+.+.++++..+.. + .+ .-+.......+.+.+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~----------e-~e----~~~~i~~~~~~~~~l~~k 239 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD----------E-EE----RAEEIAKGLPNAVILAGK 239 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH----------H-HH----HHHHHHHhcCCccccCCC
Confidence 578888888 442 6788999999999999996665544332 1 00 001111122222113332
Q ss_pred --cCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 362 --APQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 362 --~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
+.|. .++.++++ ||+ .-.|-++=|.+.|+|+|++
T Consensus 240 ~sL~e~~~li~~a~l--~I~-~DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 240 TSLEELAALIAGADL--VIG-NDSGPMHLAAALGTPTIAL 276 (334)
T ss_pred CCHHHHHHHHhcCCE--EEc-cCChHHHHHHHcCCCEEEE
Confidence 3444 47888887 775 4567788899999999985
No 243
>PF06825 HSBP1: Heat shock factor binding protein 1; InterPro: IPR009643 Heat shock factor binding protein 1 (HSBP1) appears to be a negative regulator of the heat shock response [].; PDB: 3CI9_A.
Probab=22.45 E-value=1e+02 Score=21.20 Aligned_cols=49 Identities=16% Similarity=0.250 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhhC
Q 011311 436 DELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 436 ~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
.+|...|..+|. .+..+-..++..+-..+++=|+.-..+++-|.+++..
T Consensus 2 ~elt~~v~~lL~---qmq~kFq~mS~~I~~riDeM~~RIDdLE~si~dl~~q 50 (54)
T PF06825_consen 2 QELTAFVQNLLQ---QMQDKFQTMSDQILGRIDEMSSRIDDLEKSIADLMTQ 50 (54)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH------
T ss_pred hHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 567888888886 5888888888888877777777777788888877754
No 244
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=22.36 E-value=4.5e+02 Score=25.25 Aligned_cols=101 Identities=15% Similarity=0.162 Sum_probs=60.4
Q ss_pred HHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhH
Q 011311 306 EIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSI 385 (489)
Q Consensus 306 ~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~ 385 (489)
++++.|++.+..+++..+.. ..+++.|....+.++ |==||++ .=...|.+..
T Consensus 160 ~~~~~l~~~~~Dlivlagym----------------~il~~~~l~~~~~~i----------iNiHpSl--LP~f~G~~~~ 211 (289)
T PRK13010 160 QILDLIETSGAELVVLARYM----------------QVLSDDLSRKLSGRA----------INIHHSF--LPGFKGARPY 211 (289)
T ss_pred HHHHHHHHhCCCEEEEehhh----------------hhCCHHHHhhccCCc----------eeeCccc--CCCCCCCCHH
Confidence 46666777777777777654 335665554433321 1125665 5556799999
Q ss_pred HHHHHhCCcEEeccCc--chhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHH
Q 011311 386 LESVWFGVPIVTWPIY--AEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCV 445 (489)
Q Consensus 386 ~eal~~GvP~v~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~v 445 (489)
..|+.+|+...++-.+ .+..+.+.-+.+. - +.+. ..-|.++|.+.+.++
T Consensus 212 ~~ai~~G~k~tG~TvH~v~~~lD~GpII~Q~-~--v~V~--------~~dt~e~L~~r~~~~ 262 (289)
T PRK13010 212 HQAHARGVKLIGATAHFVTDDLDEGPIIEQD-V--ERVD--------HSYSPEDLVAKGRDV 262 (289)
T ss_pred HHHHHcCCCeEEEEEEEEcCCCCCCCceEEE-E--EEcC--------CCCCHHHHHHHHHHH
Confidence 9999999999888765 2333333333222 1 1122 134788888888654
No 245
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.30 E-value=2e+02 Score=27.06 Aligned_cols=52 Identities=15% Similarity=0.238 Sum_probs=36.1
Q ss_pred cCCcceEEecCCchhHHHHHH-hCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhc
Q 011311 370 HSAIGGFVSHCGWNSILESVW-FGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMD 447 (489)
Q Consensus 370 ~~~~~~~i~HgG~~s~~eal~-~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~ 447 (489)
.+++ +|+=||=||++.|+. .++|++.+-... +|... ..+.+++.+++.++++
T Consensus 41 ~~d~--vi~iGGDGT~L~a~~~~~~Pilgin~G~--------------lGfl~----------~~~~~~~~~~l~~~~~ 93 (256)
T PRK14075 41 TADL--IIVVGGDGTVLKAAKKVGTPLVGFKAGR--------------LGFLS----------SYTLEEIDRFLEDLKN 93 (256)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCEEEEeCCC--------------Ccccc----------ccCHHHHHHHHHHHHc
Confidence 3466 999999999999977 577777665211 22211 4567778888888776
No 246
>PRK07773 replicative DNA helicase; Validated
Probab=22.29 E-value=3.8e+02 Score=30.41 Aligned_cols=38 Identities=16% Similarity=0.327 Sum_probs=31.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhhhc-CCCCCCCCeEEEEEEEcCCC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLLDR-DNAAGSNNSFSITVLVMQEH 53 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~~r-G~~~~~~h~~~Vt~~~~~~~ 53 (489)
-|++..-|+.|-..-.+.+|... +.+ | ..|.|++.+..
T Consensus 219 livIagrPg~GKT~fal~ia~~~--a~~~~--------~~V~~fSlEms 257 (886)
T PRK07773 219 LIIVAARPSMGKTTFGLDFARNC--AIRHR--------LAVAIFSLEMS 257 (886)
T ss_pred EEEEEeCCCCCcHHHHHHHHHHH--HHhcC--------CeEEEEecCCC
Confidence 47788889999999999999998 654 6 66999998854
No 247
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=22.19 E-value=3.5e+02 Score=26.93 Aligned_cols=30 Identities=17% Similarity=0.330 Sum_probs=23.6
Q ss_pred cCC-CccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 11 PSP-SVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 11 ~~~-~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
|+| -.|+-.-...++++| +++ |+|++++..
T Consensus 9 P~P~~~G~~~r~~~~~~~L--~~~---------~~v~l~~~~ 39 (397)
T TIGR03087 9 PYPPNKGDKIRSFHLLRHL--AAR---------HRVHLGTFV 39 (397)
T ss_pred CCCCCCCCcEeHHHHHHHH--Hhc---------CcEEEEEeC
Confidence 444 678899999999999 664 559999865
No 248
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=22.15 E-value=5.4e+02 Score=22.60 Aligned_cols=117 Identities=10% Similarity=-0.010 Sum_probs=58.7
Q ss_pred hhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhh
Q 011311 273 RDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERS 352 (489)
Q Consensus 273 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~ 352 (489)
..++-++|.+.. ...|+-|. .......++++..+.+-.++=.+...... ...+.. ..
T Consensus 21 A~~lG~~la~~g---~~lV~GGg----~~GlM~a~a~ga~~~gG~viGi~p~~l~~-------------~~~~~~---~~ 77 (178)
T TIGR00730 21 AAELGAYLAGQG---WGLVYGGG----RVGLMGAIADAAMENGGTAVGVNPSGLFS-------------GEVVHQ---NL 77 (178)
T ss_pred HHHHHHHHHHCC---CEEEECCC----hHhHHHHHHHHHHhcCCeEEEecchhhhh-------------hhccCC---CC
Confidence 345667776642 44555553 23345667777777777665443221000 000000 00
Q ss_pred cCCCccccccC-HHHHh-ccCCcceEEecCCchhHHHHHH---------hCCcEEecc---CcchhhHHHHHHHHh
Q 011311 353 KGRGMICGWAP-QKEVL-AHSAIGGFVSHCGWNSILESVW---------FGVPIVTWP---IYAEQQINAFQMVRD 414 (489)
Q Consensus 353 ~~~~~v~~w~p-q~~iL-~~~~~~~~i~HgG~~s~~eal~---------~GvP~v~~P---~~~DQ~~na~~v~~~ 414 (489)
+..+++.-.. ...+| ..++. .++--||.||+-|.+. +.+|++++- +|.+-..+-+.+++.
T Consensus 78 -~~~i~~~~~~~Rk~~m~~~sda-~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~ 151 (178)
T TIGR00730 78 -TELIEVNGMHERKAMMAELADA-FIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQE 151 (178)
T ss_pred -CceEEECCHHHHHHHHHHhCCE-EEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHC
Confidence 1112233332 22333 34444 5666799999988743 499999875 343333344455555
No 249
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=21.98 E-value=1.2e+02 Score=24.74 Aligned_cols=35 Identities=9% Similarity=0.066 Sum_probs=23.3
Q ss_pred EEEEcCCCcc---CHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 7 LVFIPSPSVG---HLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 7 i~~~~~~~~G---Hi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
|+|+--|-.+ .-.-.++|+.+. ++|| |+|.++...
T Consensus 3 i~fvmDpi~~i~~~kDTT~alm~eA--q~RG--------hev~~~~~~ 40 (119)
T PF02951_consen 3 IAFVMDPIESIKPYKDTTFALMLEA--QRRG--------HEVFYYEPG 40 (119)
T ss_dssp EEEEES-GGG--TTT-HHHHHHHHH--HHTT---------EEEEE-GG
T ss_pred EEEEeCCHHHCCCCCChHHHHHHHH--HHCC--------CEEEEEEcC
Confidence 7777776554 334567888888 9999 669888765
No 250
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=21.78 E-value=2.4e+02 Score=25.35 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=25.7
Q ss_pred CCeeEEEeCCCCchHHHHHHHhCCCeEEEe
Q 011311 125 VKIAGLVLDFFCSSMIDTANELGVPSYVFF 154 (489)
Q Consensus 125 ~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~ 154 (489)
..+.+||+|---..++.-|++.|||.+++.
T Consensus 28 a~i~~Visd~~~A~~lerA~~~gIpt~~~~ 57 (200)
T COG0299 28 AEIVAVISDKADAYALERAAKAGIPTVVLD 57 (200)
T ss_pred cEEEEEEeCCCCCHHHHHHHHcCCCEEEec
Confidence 368899999878889999999999997763
No 251
>PRK08322 acetolactate synthase; Reviewed
Probab=21.77 E-value=4.3e+02 Score=27.91 Aligned_cols=27 Identities=22% Similarity=0.246 Sum_probs=22.5
Q ss_pred cceEEecCCch------hHHHHHHhCCcEEecc
Q 011311 373 IGGFVSHCGWN------SILESVWFGVPIVTWP 399 (489)
Q Consensus 373 ~~~~i~HgG~~------s~~eal~~GvP~v~~P 399 (489)
.+++++|.|-| ++.+|...++|+|++.
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 44589898854 7899999999999985
No 252
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=21.66 E-value=63 Score=28.73 Aligned_cols=37 Identities=11% Similarity=0.160 Sum_probs=26.2
Q ss_pred cEEEEEcCCCccCHHH------------HHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 5 AELVFIPSPSVGHLVS------------VIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P------------~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
.+|++...|++-.+.| -..||+++ ..+| ++||++..+
T Consensus 4 k~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~--~~~G--------a~V~li~g~ 52 (185)
T PF04127_consen 4 KKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEA--ARRG--------AEVTLIHGP 52 (185)
T ss_dssp -EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHH--HHTT---------EEEEEE-T
T ss_pred CEEEEECCCccccCCCceEecCCCcCHHHHHHHHHH--HHCC--------CEEEEEecC
Confidence 4577777776666665 36899999 9999 779999865
No 253
>TIGR01498 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. This model describes the folate biosynthesis enzyme 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Alternate names include 6-hydroxymethyl-7,8-dihydropterin diphosphokinase and 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK). The extreme C-terminal region, of typically eight to thirty residues, is not included in the model. This enzyme may be found as a fusion protein with other enzymes of folate biosynthesis.
Probab=21.49 E-value=92 Score=25.76 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=21.2
Q ss_pred EEEeecCCcCCCHHHHHHHHHHHhhcCCeE
Q 011311 289 VFLCFGSMGSFGEEQIQEIASGLEKSGVRF 318 (489)
Q Consensus 289 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 318 (489)
||+++||....+.+.+...+..|++.+..+
T Consensus 1 ~~i~lGSN~g~~~~~l~~A~~~L~~~~~~i 30 (127)
T TIGR01498 1 AYIALGSNLGDRLKNLRAALAALAALPVRL 30 (127)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHhcCCcce
Confidence 589999976545566777777787665433
No 254
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=21.08 E-value=1.8e+02 Score=30.32 Aligned_cols=54 Identities=11% Similarity=0.287 Sum_probs=38.1
Q ss_pred ccCCcceEEecCCchhHHHHHHh----CCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHH
Q 011311 369 AHSAIGGFVSHCGWNSILESVWF----GVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGC 444 (489)
Q Consensus 369 ~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~ 444 (489)
..+++ +|+=||=||++.|... ++|++++- . - .+|. +. .++.+++.++|.+
T Consensus 261 ~~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGIN--------~----G--~LGF-Lt---------~i~~~e~~~~Le~ 314 (508)
T PLN02935 261 TKVDL--VITLGGDGTVLWAASMFKGPVPPVVPFS--------M----G--SLGF-MT---------PFHSEQYRDCLDA 314 (508)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEe--------C----C--Ccce-ec---------ccCHHHHHHHHHH
Confidence 45677 9999999999999774 56776652 1 1 1332 21 5678889999988
Q ss_pred HhcC
Q 011311 445 VMDG 448 (489)
Q Consensus 445 vl~~ 448 (489)
++++
T Consensus 315 il~G 318 (508)
T PLN02935 315 ILKG 318 (508)
T ss_pred HHcC
Confidence 8873
No 255
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=21.07 E-value=1.6e+02 Score=24.23 Aligned_cols=37 Identities=16% Similarity=0.433 Sum_probs=25.6
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhh--cCCeEEEEec
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEK--SGVRFLWSLR 323 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~--~~~~~vw~~~ 323 (489)
.+|+|+|||-.....+.+..+.+.+++ .+..|-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 489999999665333457778888864 3557777654
No 256
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.82 E-value=2.8e+02 Score=26.80 Aligned_cols=29 Identities=14% Similarity=0.258 Sum_probs=24.4
Q ss_pred cCCcceEEecCCchhHHHHHHh----CCcEEeccC
Q 011311 370 HSAIGGFVSHCGWNSILESVWF----GVPIVTWPI 400 (489)
Q Consensus 370 ~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~ 400 (489)
++++ +|+-||=||+++++.. ++|++++..
T Consensus 57 ~~d~--vi~~GGDGT~l~~~~~~~~~~~pv~gin~ 89 (305)
T PRK02645 57 LIDL--AIVLGGDGTVLAAARHLAPHDIPILSVNV 89 (305)
T ss_pred CcCE--EEEECCcHHHHHHHHHhccCCCCEEEEec
Confidence 4566 9999999999999864 789888876
No 257
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=20.81 E-value=1.3e+02 Score=29.60 Aligned_cols=39 Identities=23% Similarity=0.261 Sum_probs=34.6
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
|| |+++-..+.|++.=..++.+.| +++- ++.+|++++.+
T Consensus 1 mr----ILii~~~~iGD~il~tP~l~~L--k~~~------P~a~I~~l~~~ 39 (348)
T PRK10916 1 MK----ILVIGPSWVGDMMMSQSLYRTL--KARY------PQAIIDVMAPA 39 (348)
T ss_pred Cc----EEEEccCcccHHHhHHHHHHHH--HHHC------CCCeEEEEech
Confidence 67 9999999999999999999999 8864 44889999865
No 258
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=20.61 E-value=6.2e+02 Score=22.64 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=31.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEE
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLV 49 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~ 49 (489)
+-.|.+++..+.|-.+..+.+|-+. +.+| ++|.++-
T Consensus 22 ~g~v~v~~g~GkGKtt~a~g~a~ra--~g~G--------~~V~ivQ 57 (191)
T PRK05986 22 KGLLIVHTGNGKGKSTAAFGMALRA--VGHG--------KKVGVVQ 57 (191)
T ss_pred CCeEEEECCCCCChHHHHHHHHHHH--HHCC--------CeEEEEE
Confidence 4578999999999999999999999 8888 7788874
No 259
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=20.58 E-value=6.8e+02 Score=23.13 Aligned_cols=45 Identities=16% Similarity=0.209 Sum_probs=30.5
Q ss_pred HHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEE
Q 011311 275 EIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWS 321 (489)
Q Consensus 275 ~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~ 321 (489)
.+.+|+.. .+.++||-.-|........+..+-+++++.|..+...
T Consensus 23 ~~~~~~~~--~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l 67 (233)
T PRK05282 23 LIAELLAG--RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGI 67 (233)
T ss_pred HHHHHHcC--CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 34555553 3469999887755334455777999999999886543
No 260
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=20.56 E-value=1.7e+02 Score=23.33 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=32.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
++++...+..-|-.-+..++..| .++| |+|.++-..
T Consensus 2 ~v~~~~~~~~~~~lGl~~la~~l--~~~G--------~~v~~~d~~ 37 (121)
T PF02310_consen 2 RVVLACVPGEVHPLGLLYLAAYL--RKAG--------HEVDILDAN 37 (121)
T ss_dssp EEEEEEBTTSSTSHHHHHHHHHH--HHTT--------BEEEEEESS
T ss_pred EEEEEeeCCcchhHHHHHHHHHH--HHCC--------CeEEEECCC
Confidence 58999999999999999999999 9999 779988544
No 261
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=20.43 E-value=1.4e+02 Score=26.83 Aligned_cols=39 Identities=18% Similarity=0.122 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
+..+|++.-.++.|=+.-...+.++| .++| ++|.++.++
T Consensus 4 ~~k~IllgVTGsiaa~k~a~~lir~L--~k~G--------~~V~vv~T~ 42 (196)
T PRK08305 4 KGKRIGFGLTGSHCTYDEVMPEIEKL--VDEG--------AEVTPIVSY 42 (196)
T ss_pred CCCEEEEEEcCHHHHHHHHHHHHHHH--HhCc--------CEEEEEECH
Confidence 44577777777666554479999999 9999 669888766
No 262
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=20.38 E-value=1.8e+02 Score=27.30 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=33.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
..++|+-.|+.|=..=..++|.+| ..+| ++|+|++.+
T Consensus 106 ~nl~l~G~~G~GKThLa~Ai~~~l--~~~g--------~sv~f~~~~ 142 (254)
T COG1484 106 ENLVLLGPPGVGKTHLAIAIGNEL--LKAG--------ISVLFITAP 142 (254)
T ss_pred CcEEEECCCCCcHHHHHHHHHHHH--HHcC--------CeEEEEEHH
Confidence 468889999999999999999999 9889 889999865
No 263
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=20.33 E-value=62 Score=21.66 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=30.5
Q ss_pred CccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 431 NHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
+.++.+++..++ ..+.-+. -...++...++. .+..+...-..++|++.+.+
T Consensus 3 G~i~~~~~~~~l-~~~g~~~---~s~~e~~~l~~~-~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKD---LSEEEVDRLFRE-FDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSS---SCHHHHHHHHHH-HTTSSSSSEEHHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCC---CCHHHHHHHHHh-cccCCCCCCCHHHHHHHHHh
Confidence 589999999999 5553111 223334455554 35555555567777776653
No 264
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=20.10 E-value=8.7e+02 Score=25.91 Aligned_cols=27 Identities=19% Similarity=0.425 Sum_probs=22.2
Q ss_pred cceEEecCCch------hHHHHHHhCCcEEecc
Q 011311 373 IGGFVSHCGWN------SILESVWFGVPIVTWP 399 (489)
Q Consensus 373 ~~~~i~HgG~~------s~~eal~~GvP~v~~P 399 (489)
.+++++|.|-| .+.+|...++|+|++.
T Consensus 69 ~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 69 MGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34489998855 7788999999999995
No 265
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=20.05 E-value=3.9e+02 Score=24.86 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCCeE-EEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcC
Q 011311 18 LVSVIVFAKRLLLLDRDNAAGSNNSF-SITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVP 84 (489)
Q Consensus 18 i~P~l~la~~L~~~~rG~~~~~~h~~-~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ 84 (489)
++|..++..+| .+-| . +|.++|+= . ...+....+.++ ..|++...+.
T Consensus 105 tt~~~A~~~AL--~alg--------~~RIalvTPY-~---~~v~~~~~~~l~------~~G~eV~~~~ 152 (239)
T TIGR02990 105 VTPSSAAVDGL--AALG--------VRRISLLTPY-T---PETSRPMAQYFA------VRGFEIVNFT 152 (239)
T ss_pred eCHHHHHHHHH--HHcC--------CCEEEEECCC-c---HHHHHHHHHHHH------hCCcEEeeee
Confidence 57888888899 8878 4 38888753 2 123444555555 5677776653
Done!