Query 011311
Match_columns 489
No_of_seqs 200 out of 1615
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 05:30:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011311.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011311hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.5E-72 8.5E-77 569.5 42.6 434 4-486 13-454 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1E-64 3.6E-69 521.8 45.6 451 4-486 6-469 (480)
3 2acv_A Triterpene UDP-glucosyl 100.0 4.6E-64 1.6E-68 515.1 46.4 441 4-485 9-462 (463)
4 2c1x_A UDP-glucose flavonoid 3 100.0 3E-64 1E-68 515.1 41.3 436 4-488 7-454 (456)
5 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 4.4E-63 1.5E-67 511.3 41.1 443 3-487 7-480 (482)
6 2iya_A OLEI, oleandomycin glyc 100.0 4E-43 1.4E-47 357.4 33.3 388 4-481 12-417 (424)
7 4amg_A Snogd; transferase, pol 100.0 4.3E-43 1.5E-47 354.2 20.9 342 5-466 23-385 (400)
8 1iir_A Glycosyltransferase GTF 100.0 7.1E-42 2.4E-46 347.1 24.8 355 6-464 2-383 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 4.3E-41 1.5E-45 341.5 20.1 375 6-486 2-401 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 5.6E-39 1.9E-43 324.5 24.2 363 1-485 1-382 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 1.5E-37 5.1E-42 315.3 29.2 369 5-484 21-412 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.8E-36 6.2E-41 305.7 33.1 370 5-485 5-398 (402)
13 2iyf_A OLED, oleandomycin glyc 100.0 1.2E-35 4E-40 302.8 32.3 373 5-482 8-396 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 1.8E-36 6E-41 309.9 24.1 365 5-482 21-432 (441)
15 2p6p_A Glycosyl transferase; X 100.0 2.4E-35 8.3E-40 295.9 29.2 348 7-482 3-376 (384)
16 4fzr_A SSFS6; structural genom 100.0 1E-32 3.6E-37 278.1 24.9 351 5-479 16-394 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 5.3E-32 1.8E-36 273.0 24.2 346 5-480 21-392 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5.4E-31 1.8E-35 264.8 23.2 352 5-481 2-384 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.8E-29 1.7E-33 252.2 28.9 358 4-484 20-407 (412)
20 2o6l_A UDP-glucuronosyltransfe 100.0 1.8E-27 6.1E-32 210.5 18.2 165 270-465 5-170 (170)
21 3s2u_A UDP-N-acetylglucosamine 100.0 1.1E-26 3.7E-31 230.9 25.3 334 1-477 1-348 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 3.5E-17 1.2E-21 162.1 27.0 340 5-485 7-355 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 2.7E-15 9.2E-20 136.2 9.4 142 281-445 23-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.4 8.7E-12 3E-16 117.8 19.5 115 286-423 157-274 (282)
25 1vgv_A UDP-N-acetylglucosamine 99.1 2.7E-09 9.4E-14 105.9 19.3 158 285-482 204-371 (384)
26 3okp_A GDP-mannose-dependent a 99.1 1.6E-07 5.3E-12 93.2 31.1 320 1-453 1-348 (394)
27 3c48_A Predicted glycosyltrans 99.1 1.3E-07 4.5E-12 95.4 29.3 83 353-452 305-394 (438)
28 1v4v_A UDP-N-acetylglucosamine 99.0 2.1E-08 7.3E-13 99.2 22.1 107 354-483 255-364 (376)
29 3ot5_A UDP-N-acetylglucosamine 99.0 9.8E-09 3.3E-13 102.7 17.4 109 354-485 282-393 (403)
30 3beo_A UDP-N-acetylglucosamine 98.9 2.6E-07 9E-12 91.1 25.5 106 354-482 263-371 (375)
31 3dzc_A UDP-N-acetylglucosamine 98.9 7.9E-08 2.7E-12 95.9 20.4 104 354-480 288-394 (396)
32 3fro_A GLGA glycogen synthase; 98.9 2.7E-06 9.1E-11 85.5 31.3 130 288-447 252-394 (439)
33 2jjm_A Glycosyl transferase, g 98.9 5.7E-06 2E-10 82.1 31.8 83 354-453 267-354 (394)
34 2gek_A Phosphatidylinositol ma 98.8 2.6E-06 8.9E-11 84.7 26.1 85 353-454 262-354 (406)
35 2r60_A Glycosyl transferase, g 98.7 8.4E-06 2.9E-10 83.7 26.2 84 353-453 334-428 (499)
36 4hwg_A UDP-N-acetylglucosamine 98.6 4.7E-07 1.6E-11 89.7 14.1 159 286-483 203-373 (385)
37 2iw1_A Lipopolysaccharide core 98.6 0.00013 4.6E-09 71.3 31.1 90 354-459 253-347 (374)
38 2iuy_A Avigt4, glycosyltransfe 98.6 9.5E-07 3.3E-11 85.9 15.3 125 289-447 164-307 (342)
39 2f9f_A First mannosyl transfer 98.4 1.6E-06 5.3E-11 76.0 10.2 144 288-461 24-175 (177)
40 2x6q_A Trehalose-synthase TRET 98.3 0.0016 5.3E-08 64.8 30.8 83 354-455 293-385 (416)
41 3s28_A Sucrose synthase 1; gly 97.9 0.0018 6.2E-08 69.7 24.2 77 354-446 640-728 (816)
42 1rzu_A Glycogen synthase 1; gl 97.9 0.0037 1.3E-07 63.5 25.2 137 288-455 292-449 (485)
43 3q3e_A HMW1C-like glycosyltran 97.6 0.00091 3.1E-08 69.0 14.6 178 286-487 440-630 (631)
44 3qhp_A Type 1 capsular polysac 97.4 0.0011 3.7E-08 56.6 11.0 81 354-453 56-144 (166)
45 2vsy_A XCC0866; transferase, g 97.4 0.0033 1.1E-07 65.2 16.2 88 354-455 434-528 (568)
46 2bfw_A GLGA glycogen synthase; 97.3 0.0026 9E-08 56.0 13.0 78 355-449 96-182 (200)
47 4gyw_A UDP-N-acetylglucosamine 97.3 0.0025 8.4E-08 68.2 13.8 143 285-453 521-672 (723)
48 3oy2_A Glycosyltransferase B73 97.0 0.016 5.4E-07 57.3 15.9 81 356-455 256-361 (413)
49 2xci_A KDO-transferase, 3-deox 97.0 0.0019 6.5E-08 63.5 8.6 94 355-462 261-362 (374)
50 3rhz_A GTF3, nucleotide sugar 96.7 0.0022 7.5E-08 62.0 6.9 107 355-482 215-335 (339)
51 2qzs_A Glycogen synthase; glyc 96.4 0.052 1.8E-06 54.8 14.7 138 287-455 292-450 (485)
52 3tov_A Glycosyl transferase fa 95.8 1.4 4.7E-05 42.3 21.4 96 285-398 184-286 (349)
53 2x0d_A WSAF; GT4 family, trans 95.2 0.009 3.1E-07 59.4 3.1 84 354-455 295-385 (413)
54 1psw_A ADP-heptose LPS heptosy 94.5 3.3 0.00011 39.3 22.9 96 285-398 179-286 (348)
55 2hy7_A Glucuronosyltransferase 92.6 0.095 3.3E-06 51.8 4.7 73 354-448 265-352 (406)
56 3vue_A GBSS-I, granule-bound s 91.5 0.82 2.8E-05 46.8 10.3 141 287-447 327-476 (536)
57 1uqt_A Alpha, alpha-trehalose- 84.7 6.1 0.00021 39.6 11.3 105 359-487 337-454 (482)
58 2gt1_A Lipopolysaccharide hept 78.8 2.4 8.3E-05 39.9 5.5 135 285-447 177-321 (326)
59 3nb0_A Glycogen [starch] synth 75.7 14 0.00047 38.6 10.3 41 360-402 499-552 (725)
60 3t5t_A Putative glycosyltransf 74.1 18 0.00062 36.2 10.6 109 355-486 353-472 (496)
61 2iz6_A Molybdenum cofactor car 69.3 33 0.0011 29.0 9.6 101 273-401 34-140 (176)
62 3tl4_X Glutaminyl-tRNA synthet 60.5 8.1 0.00028 33.1 4.1 60 412-484 108-177 (187)
63 4e5s_A MCCFLIKE protein (BA_56 55.1 36 0.0012 32.0 8.1 73 300-401 63-137 (331)
64 4h1h_A LMO1638 protein; MCCF-l 49.7 49 0.0017 31.0 8.1 73 300-401 63-137 (327)
65 1zl0_A Hypothetical protein PA 45.9 66 0.0022 29.9 8.2 75 298-401 63-139 (311)
66 3sr3_A Microcin immunity prote 45.7 52 0.0018 31.0 7.5 73 300-401 64-138 (336)
67 2wqk_A 5'-nucleotidase SURE; S 43.3 99 0.0034 27.7 8.7 30 125-154 84-126 (251)
68 2yxb_A Coenzyme B12-dependent 42.6 1.3E+02 0.0045 24.6 8.8 39 3-51 17-55 (161)
69 3zqu_A Probable aromatic acid 40.6 31 0.001 30.1 4.7 40 1-51 1-40 (209)
70 1ccw_A Protein (glutamate muta 39.9 34 0.0011 27.5 4.6 38 4-51 3-40 (137)
71 2l82_A Designed protein OR32; 38.8 64 0.0022 24.4 5.5 35 287-325 2-36 (162)
72 3dfz_A SIRC, precorrin-2 dehyd 38.7 31 0.0011 30.4 4.5 146 285-466 31-186 (223)
73 3vue_A GBSS-I, granule-bound s 38.3 16 0.00054 37.1 2.9 38 4-53 9-54 (536)
74 2pju_A Propionate catabolism o 38.1 42 0.0014 29.6 5.2 29 370-401 63-91 (225)
75 3tla_A MCCF; serine protease, 37.4 77 0.0026 30.3 7.4 74 299-401 93-168 (371)
76 4dzz_A Plasmid partitioning pr 36.7 1.2E+02 0.0043 25.3 8.2 36 6-51 3-39 (206)
77 1g5t_A COB(I)alamin adenosyltr 36.3 1.1E+02 0.0038 26.2 7.5 38 4-51 28-65 (196)
78 3s2u_A UDP-N-acetylglucosamine 36.1 87 0.003 29.6 7.6 26 370-397 92-120 (365)
79 3l7i_A Teichoic acid biosynthe 36.0 22 0.00077 37.5 3.7 115 360-486 605-720 (729)
80 1u0t_A Inorganic polyphosphate 35.8 53 0.0018 30.4 5.9 32 367-400 72-107 (307)
81 1ydh_A AT5G11950; structural g 34.8 73 0.0025 27.8 6.2 33 367-400 102-143 (216)
82 2q5c_A NTRC family transcripti 33.3 35 0.0012 29.4 3.8 30 370-402 51-80 (196)
83 3ty2_A 5'-nucleotidase SURE; s 33.2 69 0.0024 28.9 5.8 31 125-155 92-135 (261)
84 2x0d_A WSAF; GT4 family, trans 33.0 20 0.00068 35.0 2.5 37 5-51 47-88 (413)
85 3l4e_A Uncharacterized peptida 32.7 1.5E+02 0.0052 25.5 8.0 49 273-321 15-63 (206)
86 1qkk_A DCTD, C4-dicarboxylate 32.6 1.4E+02 0.0049 23.4 7.5 59 391-460 74-132 (155)
87 2qx0_A 7,8-dihydro-6-hydroxyme 31.1 76 0.0026 26.2 5.3 32 288-319 3-35 (159)
88 3rg8_A Phosphoribosylaminoimid 30.1 2.3E+02 0.0079 23.3 9.2 139 288-467 4-150 (159)
89 1f9y_A HPPK, protein (6-hydrox 29.8 66 0.0022 26.6 4.7 32 288-319 2-34 (158)
90 2qzs_A Glycogen synthase; glyc 29.4 38 0.0013 33.3 4.0 35 7-51 3-43 (485)
91 1fy2_A Aspartyl dipeptidase; s 28.5 2.1E+02 0.0071 25.0 8.3 46 273-320 21-66 (229)
92 1eiw_A Hypothetical protein MT 27.7 1.3E+02 0.0044 23.1 5.8 61 370-447 38-109 (111)
93 1q1v_A DEK protein; winged-hel 27.7 99 0.0034 21.5 4.6 54 431-484 10-65 (70)
94 4dik_A Flavoprotein; TM0755, e 27.4 51 0.0017 32.0 4.3 45 276-320 255-299 (410)
95 3qbc_A 2-amino-4-hydroxy-6-hyd 27.1 80 0.0027 26.2 4.8 33 287-319 5-38 (161)
96 3ip0_A 2-amino-4-hydroxy-6-hyd 27.1 78 0.0027 26.1 4.7 32 288-319 2-34 (158)
97 1cbk_A Protein (7,8-dihydro-6- 27.0 74 0.0025 26.3 4.6 32 288-319 3-35 (160)
98 2lnd_A De novo designed protei 25.3 88 0.003 22.2 4.0 48 391-447 50-100 (112)
99 2i2c_A Probable inorganic poly 24.2 39 0.0013 30.7 2.7 28 371-400 36-69 (272)
100 1o4v_A Phosphoribosylaminoimid 23.7 3.3E+02 0.011 22.9 8.5 35 287-323 14-48 (183)
101 2i2x_B MTAC, methyltransferase 23.5 90 0.0031 28.0 4.9 38 4-51 123-160 (258)
102 2an1_A Putative kinase; struct 22.7 60 0.002 29.7 3.6 33 366-400 59-95 (292)
103 2a33_A Hypothetical protein; s 22.3 3.8E+02 0.013 23.1 10.2 43 358-400 95-147 (215)
104 1yt5_A Inorganic polyphosphate 21.2 45 0.0016 30.0 2.4 29 370-400 41-72 (258)
105 2ejb_A Probable aromatic acid 21.1 1.2E+02 0.0041 25.8 5.0 35 6-51 3-37 (189)
106 2lpm_A Two-component response 20.7 69 0.0024 25.0 3.1 29 125-153 52-85 (123)
107 3ia7_A CALG4; glycosysltransfe 20.6 1.7E+02 0.0059 27.3 6.7 27 370-398 102-130 (402)
108 2hy7_A Glucuronosyltransferase 20.6 5.3E+02 0.018 24.3 10.3 29 126-154 124-153 (406)
109 1t35_A Hypothetical protein YV 20.3 3.9E+02 0.013 22.5 8.5 102 273-400 22-135 (191)
110 2q5c_A NTRC family transcripti 20.2 1.4E+02 0.0049 25.4 5.3 41 111-157 130-170 (196)
111 2x5n_A SPRPN10, 26S proteasome 20.1 3.9E+02 0.013 22.4 8.2 64 7-86 110-173 (192)
112 1ydn_A Hydroxymethylglutaryl-C 20.0 4.8E+02 0.017 23.5 11.8 27 298-324 22-48 (295)
113 3qjg_A Epidermin biosynthesis 20.0 1.1E+02 0.0038 25.7 4.4 36 5-51 6-41 (175)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.5e-72 Score=569.48 Aligned_cols=434 Identities=22% Similarity=0.347 Sum_probs=355.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV 83 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l 83 (489)
++||+++|+|++||++||+.||+.| +++| +.++|||++++. ..+++........++++|+.+
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L--~~~g------~~~~vT~~~t~~----------~~~~~~~~~~~~~~~i~~~~i 74 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKI--ATEA------PKVTFSFFCTTT----------TNDTLFSRSNEFLPNIKYYNV 74 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHH--HHHC------TTSEEEEEECHH----------HHHHSCSSSSCCCTTEEEEEC
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHH--HhCC------CCEEEEEEeCHH----------HHHhhhcccccCCCCceEEec
Confidence 6899999999999999999999999 9998 778899999762 233332100011357999999
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHHHH
Q 011311 84 PKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGF 163 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 163 (489)
|++.+++.+...++...+..+.....+.+++.+++++++...++||||+|+++.|+..+|+++|||++.|++++++.++.
T Consensus 75 pdglp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~ 154 (454)
T 3hbf_A 75 HDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLT 154 (454)
T ss_dssp CCCCCTTCCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHH
T ss_pred CCCCCCCccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHH
Confidence 98877666554444455556666666677777777655334589999999999999999999999999999999988888
Q ss_pred HhhccccCCC-Cc--ccCcCCcccccCCCCCCCCCCCCccccc-CCC-chHHHHHHHHhhhccceEEecchhHhhHHHHH
Q 011311 164 VLHLPTRGGE-EF--EESEADSADIFTYANPVPYRVLPSLCFN-KHG-GFSAFENFGRRFKETKGIIVNTFEELESHAVE 238 (489)
Q Consensus 164 ~~~~~~~~~~-~~--~~~~~~~~~~Pgl~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~~ 238 (489)
+.+.+.+... .. ...+....++||++ +++.+++|..+.. ... +...+.+..+...+.+++++||+++||+++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~iPg~p-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~ 233 (454)
T 3hbf_A 155 HVYTDLIREKTGSKEVHDVKSIDVLPGFP-ELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIEN 233 (454)
T ss_dssp HHTHHHHHHTCCHHHHTTSSCBCCSTTSC-CBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHhhHHHHhhcCCCccccccccccCCCCC-CcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHH
Confidence 8776543222 10 01122213489996 6888999987753 221 24556667788889999999999999999988
Q ss_pred HHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeE
Q 011311 239 YLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRF 318 (489)
Q Consensus 239 ~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 318 (489)
.+.. ..|++++|||++..... .....++++.+||+.++++++|||||||+...+.+++.+++.+|++.+++|
T Consensus 234 ~~~~--~~~~v~~vGPl~~~~~~------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~f 305 (454)
T 3hbf_A 234 ELNS--KFKLLLNVGPFNLTTPQ------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPF 305 (454)
T ss_dssp HHHT--TSSCEEECCCHHHHSCC------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCE
T ss_pred HHHh--cCCCEEEECCccccccc------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeE
Confidence 8876 56789999999865431 112346789999999888899999999999889999999999999999999
Q ss_pred EEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 319 LWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 319 vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
||+++... ...+|++|.++.++|+++++|+||.+||+|+++++|||||||||++|++++|||||+|
T Consensus 306 lw~~~~~~--------------~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~ 371 (454)
T 3hbf_A 306 IWSFRGDP--------------KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISR 371 (454)
T ss_dssp EEECCSCH--------------HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred EEEeCCcc--------------hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecC
Confidence 99998651 2358889988889999999999999999999999999999999999999999999999
Q ss_pred cCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHHhcCCChHH
Q 011311 399 PIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDS---EVRKRVKEVSEKARLALRDGGSSYA 475 (489)
Q Consensus 399 P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~---~~~~~a~~l~~~~~~~~~~~g~~~~ 475 (489)
|+++||+.||+++++.||+|+.+... .+++++|+++|+++|+ ++ +||+||+++++++++++++||||+.
T Consensus 372 P~~~DQ~~Na~~v~~~~g~Gv~l~~~-------~~~~~~l~~av~~ll~-~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~ 443 (454)
T 3hbf_A 372 PFFGDQGLNTILTESVLEIGVGVDNG-------VLTKESIKKALELTMS-SEKGGIMRQKIVKLKESAFKAVEQNGTSAM 443 (454)
T ss_dssp CCSTTHHHHHHHHHTTSCSEEECGGG-------SCCHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHHHTSTTSHHHH
T ss_pred cccccHHHHHHHHHHhhCeeEEecCC-------CCCHHHHHHHHHHHHC-CChHHHHHHHHHHHHHHHHHhhccCCCHHH
Confidence 99999999999988867999998754 7999999999999998 55 8999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 011311 476 ATGRLIEDLFG 486 (489)
Q Consensus 476 ~~~~~~~~~~~ 486 (489)
++++||+++++
T Consensus 444 ~l~~~v~~i~~ 454 (454)
T 3hbf_A 444 DFTTLIQIVTS 454 (454)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999863
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1e-64 Score=521.85 Aligned_cols=451 Identities=34% Similarity=0.574 Sum_probs=333.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhc-CCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEE
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDR-DNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIG 82 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~r-G~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 82 (489)
++||+++|+|++||++||++||++| ++| | |+|||+++... ....+++.+. .....+++|+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L--~~r~G--------h~Vt~~t~~~~-----~~~~~~~~~~---~~~~~~i~~~~ 67 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRL--VHLHG--------LTVTFVIAGEG-----PPSKAQRTVL---DSLPSSISSVF 67 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHH--HHHHC--------CEEEEEECCSS-----SCC-CHHHHH---C-CCTTEEEEE
T ss_pred CcEEEEecCcchhHHHHHHHHHHHH--HhCCC--------CEEEEEECCCc-----chhhhhhhhc---cccCCCceEEE
Confidence 4799999999999999999999999 998 9 67999998732 0122333332 01135899999
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCe-eEEEeCCCCchHHHHHHHhCCCeEEEechhHHHH
Q 011311 83 VPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKI-AGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFL 161 (489)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 161 (489)
++....+......+....+........+.+++.++++.. ..++ ||||+|.++.|+..+|+++|||++.++++++...
T Consensus 68 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 145 (480)
T 2vch_A 68 LPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVE--GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVL 145 (480)
T ss_dssp CCCCCCTTSCTTCCHHHHHHHHHHTTHHHHHHHHHHHHH--TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHH
T ss_pred cCCCCCCCCCCchhHHHHHHHHHHhhhHHHHHHHHHhcc--CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHH
Confidence 986532211111233232323334445556666665532 3477 9999999999999999999999999999988766
Q ss_pred HHHhhccccCC---CCcccCcCCcccccCCCCCCCCCCCCcccccCCC-chHHHHHHHHhhhccceEEecchhHhhHHHH
Q 011311 162 GFVLHLPTRGG---EEFEESEADSADIFTYANPVPYRVLPSLCFNKHG-GFSAFENFGRRFKETKGIIVNTFEELESHAV 237 (489)
Q Consensus 162 ~~~~~~~~~~~---~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~ 237 (489)
+.+.+++.... ..+.+.+.. ..+|+++ +++..+++..+..... .+..+.+..+.+++..|+++||+.+++...+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~-~~~Pg~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~ 223 (480)
T 2vch_A 146 SFFLHLPKLDETVSCEFRELTEP-LMLPGCV-PVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAI 223 (480)
T ss_dssp HHHHHHHHHHHHCCSCGGGCSSC-BCCTTCC-CBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHH
T ss_pred HHHHHHHHHHhcCCCcccccCCc-ccCCCCC-CCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHH
Confidence 66554432211 001111122 4567775 5666667765543221 1444556667788889999999999999988
Q ss_pred HHHhhc-CCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCC
Q 011311 238 EYLMKC-DGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGV 316 (489)
Q Consensus 238 ~~~~~~-~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~ 316 (489)
..+.++ +..+++++|||++...... .....+.++.+||++++++++|||||||+...+.+++.+++++|+++++
T Consensus 224 ~~l~~~~~~~~~v~~vGpl~~~~~~~-----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~ 298 (480)
T 2vch_A 224 KALQEPGLDKPPVYPVGPLVNIGKQE-----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQ 298 (480)
T ss_dssp HHHHSCCTTCCCEEECCCCCCCSCSC-----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHhcccCCCcEEEEeccccccccc-----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCC
Confidence 888752 1246799999998643210 0023567899999998888999999999998889999999999999999
Q ss_pred eEEEEecCCCCCCC---CCCCCCcccccccCChhhHhhhcCCCcccc-ccCHHHHhccCCcceEEecCCchhHHHHHHhC
Q 011311 317 RFLWSLRKTPPKDR---PEMPGEYTCVEDILPRGFQERSKGRGMICG-WAPQKEVLAHSAIGGFVSHCGWNSILESVWFG 392 (489)
Q Consensus 317 ~~vw~~~~~~~~~~---~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~-w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~G 392 (489)
+|||+++.....+. .+.+. ...+...+|++|.++..++++++. |+||.+||+|+++++|||||||||++||+++|
T Consensus 299 ~~lw~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~G 377 (480)
T 2vch_A 299 RFLWVIRSPSGIANSSYFDSHS-QTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSG 377 (480)
T ss_dssp EEEEEECCCCSSTTTTTTCC---CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHT
T ss_pred cEEEEECCcccccccccccccc-ccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcC
Confidence 99999986521100 00000 011223588999888888888885 99999999999999999999999999999999
Q ss_pred CcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHhcC
Q 011311 393 VPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDG--DSEVRKRVKEVSEKARLALRDG 470 (489)
Q Consensus 393 vP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~--~~~~~~~a~~l~~~~~~~~~~~ 470 (489)
||||+||+++||+.||+++++.+|+|+.+... +++.+|+++|+++|+++|++ +++||+||+++++++++++.+|
T Consensus 378 vP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~----~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~g 453 (480)
T 2vch_A 378 IPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG----DDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDD 453 (480)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTTCCEECCCCC----TTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred CCEEeccccccchHHHHHHHHHhCeEEEeecc----cCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999987667999988642 11369999999999999973 2589999999999999999999
Q ss_pred CChHHHHHHHHHHHhh
Q 011311 471 GSSYAATGRLIEDLFG 486 (489)
Q Consensus 471 g~~~~~~~~~~~~~~~ 486 (489)
|+|++++++||+++++
T Consensus 454 Gss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 454 GTSTKALSLVALKWKA 469 (480)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999874
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.6e-64 Score=515.12 Aligned_cols=441 Identities=51% Similarity=0.923 Sum_probs=334.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhc--CCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEE
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDR--DNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFI 81 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~r--G~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 81 (489)
++||+++|+|++||++|+++||++| ++| | |+|||++++.. +.+...++++.+. ....+++|+
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L--~~r~pG--------~~Vt~v~t~~~--~~~~~~~~~~~~~----~~~~~i~~~ 72 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLL--TNHDKN--------LYITVFCIKFP--GMPFADSYIKSVL----ASQPQIQLI 72 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHH--HHTCTT--------EEEEEEECCCT--TCCCCHHHHHHHH----CSCTTEEEE
T ss_pred CCEEEEEcCcccchHHHHHHHHHHH--HhcCCC--------cEEEEEEcCCc--chhhhhhhhhhcc----cCCCCceEE
Confidence 5799999999999999999999999 998 9 88999998743 2222233444432 123689999
Q ss_pred EcCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHH
Q 011311 82 GVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFL 161 (489)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 161 (489)
.+|+...+..+........+........+.+++.++++ ...++||||+|.++.|+..+|+++|||++++++++++.+
T Consensus 73 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 149 (463)
T 2acv_A 73 DLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTI---LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFL 149 (463)
T ss_dssp ECCCCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHH---CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHH
T ss_pred ECCCCCCCcccccCCccHHHHHHHHhhhHHHHHHHHhc---cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHH
Confidence 99976322221111222222333344444555555554 236899999999999999999999999999999998777
Q ss_pred HHHhhccccCCC-CcccCcC---CcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHhhHHHH
Q 011311 162 GFVLHLPTRGGE-EFEESEA---DSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAV 237 (489)
Q Consensus 162 ~~~~~~~~~~~~-~~~~~~~---~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~ 237 (489)
..+.+.+.+... .+...+. . ..+|++..+++..+++..+..+...+..+....+.+++..++++||++++|++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~ 228 (463)
T 2acv_A 150 SLMLSLKNRQIEEVFDDSDRDHQL-LNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSI 228 (463)
T ss_dssp HHHHHGGGSCTTCCCCCSSGGGCE-ECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHH
T ss_pred HHHHHHHhhcccCCCCCccccCce-eECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHH
Confidence 776665543211 1111111 2 5678873366666776554433112445556667778889999999999999988
Q ss_pred HHHhhcCC--CCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCc-CCCHHHHHHHHHHHhhc
Q 011311 238 EYLMKCDG--VPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMG-SFGEEQIQEIASGLEKS 314 (489)
Q Consensus 238 ~~~~~~~~--~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~~al~~~ 314 (489)
..+.+ .. .|++++|||++....... ....+..+.++.+||+.++++++|||||||+. ..+.+++.+++++|++.
T Consensus 229 ~~l~~-~~~p~~~v~~vGpl~~~~~~~~--~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~ 305 (463)
T 2acv_A 229 DALYD-HDEKIPPIYAVGPLLDLKGQPN--PKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHS 305 (463)
T ss_dssp HHHHH-HCTTSCCEEECCCCCCSSCCCB--TTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHh-ccccCCcEEEeCCCcccccccc--cccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhC
Confidence 88765 12 467999999986432000 00000235689999999888899999999998 88888999999999999
Q ss_pred CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhh--cCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhC
Q 011311 315 GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERS--KGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFG 392 (489)
Q Consensus 315 ~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~G 392 (489)
+++|||+++.. ...+|++|.++. ++|+++++|+||.++|+|+++++|||||||||++|++++|
T Consensus 306 ~~~~l~~~~~~---------------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~G 370 (463)
T 2acv_A 306 GVRFLWSNSAE---------------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFG 370 (463)
T ss_dssp TCEEEEECCCC---------------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTT
T ss_pred CCcEEEEECCC---------------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcC
Confidence 99999999863 123677887776 7899999999999999999999999999999999999999
Q ss_pred CcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCC--ccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcC
Q 011311 393 VPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTEN--HVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDG 470 (489)
Q Consensus 393 vP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~--~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~ 470 (489)
||||+||+++||+.||+++++.+|+|+.+...+ +++ .+++++|+++|+++|+++++||+||+++++++++++.+|
T Consensus 371 vP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~---~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~g 447 (463)
T 2acv_A 371 VPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDY---RKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDG 447 (463)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTSCCEEESCSSC---CTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTT
T ss_pred CCeeeccchhhhHHHHHHHHHHcCeEEEEeccc---CCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999766679999983100 013 689999999999999734799999999999999999999
Q ss_pred CChHHHHHHHHHHHh
Q 011311 471 GSSYAATGRLIEDLF 485 (489)
Q Consensus 471 g~~~~~~~~~~~~~~ 485 (489)
|||++++++||++++
T Consensus 448 Gss~~~l~~~v~~~~ 462 (463)
T 2acv_A 448 GSSLISVGKLIDDIT 462 (463)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhc
Confidence 999999999999985
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3e-64 Score=515.14 Aligned_cols=436 Identities=23% Similarity=0.386 Sum_probs=329.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCC-CCCCCeEEEE
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGA-TADVSIRFIG 82 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~~ 82 (489)
++||+++|+|++||++|+++||++| ++|| |++.|||++++. ..+.+..... ....+++|+.
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L--~~rG------h~v~vt~~~t~~----------~~~~~~~~~~~~~~~~i~~~~ 68 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRL--AAAA------PHAVFSFFSTSQ----------SNASIFHDSMHTMQCNIKSYD 68 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHH--HHHC------TTSEEEEEECHH----------HHHHHC-------CTTEEEEE
T ss_pred CCEEEEEcCcccchHHHHHHHHHHH--HhCC------CCeEEEEEeCch----------hHHHhhccccccCCCceEEEe
Confidence 5799999999999999999999999 9999 888889998651 1222210000 0125899999
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHHH
Q 011311 83 VPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLG 162 (489)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 162 (489)
++++.++..+........+..+.......+++.++++.+....++||||+|.++.|+..+|+++|||++.+++++++...
T Consensus 69 i~~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 148 (456)
T 2c1x_A 69 ISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLS 148 (456)
T ss_dssp CCCCCCTTCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHH
T ss_pred CCCCCCCcccccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHH
Confidence 98765544322223333344444444445666666654321358999999999999999999999999999999876665
Q ss_pred HHhhccccCCC-Cc----ccCcCCcccccCCCCCCCCCCCCcccccCCC--ch-HHHHHHHHhhhccceEEecchhHhhH
Q 011311 163 FVLHLPTRGGE-EF----EESEADSADIFTYANPVPYRVLPSLCFNKHG--GF-SAFENFGRRFKETKGIIVNTFEELES 234 (489)
Q Consensus 163 ~~~~~~~~~~~-~~----~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~gi~~~s~~~l~~ 234 (489)
.+.+.+.+... .+ ...+....++|+++ +++..+++..+..... .. ..+.+.....++.+++++||++++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~-~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~ 227 (456)
T 2c1x_A 149 THVYIDEIREKIGVSGIQGREDELLNFIPGMS-KVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDD 227 (456)
T ss_dssp HHHTHHHHHHHHCSSCCTTCTTCBCTTSTTCT-TCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCH
T ss_pred HHhhhHHHHhccCCcccccccccccccCCCCC-cccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhH
Confidence 54332211000 00 11111113578876 4666777764432211 11 22233344556788999999999999
Q ss_pred HHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhc
Q 011311 235 HAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKS 314 (489)
Q Consensus 235 ~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~ 314 (489)
.....+.. ..|++++|||++..... ...+.+.++.+||+.++++++|||||||+...+.+++.+++++|++.
T Consensus 228 ~~~~~~~~--~~~~~~~vGpl~~~~~~------~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 299 (456)
T 2c1x_A 228 SLTNDLKS--KLKTYLNIGPFNLITPP------PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEAS 299 (456)
T ss_dssp HHHHHHHH--HSSCEEECCCHHHHC---------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh--cCCCEEEecCcccCccc------ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhc
Confidence 88777776 45789999999764331 00122456999999988889999999999888888999999999999
Q ss_pred CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhCCc
Q 011311 315 GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVP 394 (489)
Q Consensus 315 ~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP 394 (489)
+++|||+++... ...+|++|.++.++|+++++|+||.++|+|+++++|||||||||++||+++|||
T Consensus 300 ~~~~lw~~~~~~--------------~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP 365 (456)
T 2c1x_A 300 RVPFIWSLRDKA--------------RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVP 365 (456)
T ss_dssp TCCEEEECCGGG--------------GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCC
T ss_pred CCeEEEEECCcc--------------hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCce
Confidence 999999998641 134778887778889999999999999999999999999999999999999999
Q ss_pred EEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHHhcCC
Q 011311 395 IVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDS---EVRKRVKEVSEKARLALRDGG 471 (489)
Q Consensus 395 ~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~---~~~~~a~~l~~~~~~~~~~~g 471 (489)
||++|++.||+.||+++++.||+|+.+... .+++++|+++|+++|+ ++ +||+||+++++++++++++||
T Consensus 366 ~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~-------~~~~~~l~~~i~~ll~-~~~~~~~r~~a~~l~~~~~~a~~~gG 437 (456)
T 2c1x_A 366 LICRPFFGDQRLNGRMVEDVLEIGVRIEGG-------VFTKSGLMSCFDQILS-QEKGKKLRENLRALRETADRAVGPKG 437 (456)
T ss_dssp EEECCCSTTHHHHHHHHHHTSCCEEECGGG-------SCCHHHHHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred EEecCChhhHHHHHHHHHHHhCeEEEecCC-------CcCHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHHHHhhhcCC
Confidence 999999999999999998888999998654 7999999999999998 55 899999999999999999999
Q ss_pred ChHHHHHHHHHHHhhCC
Q 011311 472 SSYAATGRLIEDLFGSV 488 (489)
Q Consensus 472 ~~~~~~~~~~~~~~~~~ 488 (489)
||+.++++||+++++.+
T Consensus 438 sS~~~l~~~v~~~~~~~ 454 (456)
T 2c1x_A 438 SSTENFITLVDLVSKPK 454 (456)
T ss_dssp HHHHHHHHHHHHHTSCC
T ss_pred cHHHHHHHHHHHHHhcC
Confidence 99999999999997643
No 5
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=4.4e-63 Score=511.32 Aligned_cols=443 Identities=27% Similarity=0.435 Sum_probs=323.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCC---C-CCCe
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGAT---A-DVSI 78 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~ 78 (489)
.++||+++|+|++||++|++.||++| ++|| |+|||++++. +.+.+...... . .+++
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L--~~rG--------~~VT~v~t~~----------~~~~~~~~~~~~~~~~~~~i 66 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLL--HLRG--------FHITFVNTEY----------NHKRLLKSRGPKAFDGFTDF 66 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHH--HHTT--------CEEEEEEEHH----------HHHHHC------------CE
T ss_pred CCCEEEEecCccchhHHHHHHHHHHH--HhCC--------CeEEEEeCCc----------hhhhhccccccccccCCCce
Confidence 46799999999999999999999999 9999 7799998762 23333200000 0 1489
Q ss_pred EEEEcCCCCCCC---CCCCCChHHHHHHHHHHhhHHHHHHHHHHHhc-CCCCeeEEEeCCCCchHHHHHHHhCCCeEEEe
Q 011311 79 RFIGVPKMNPPP---LDYFKSPEKFITEYVDSHKDCIKEAIIEHVLN-NNVKIAGLVLDFFCSSMIDTANELGVPSYVFF 154 (489)
Q Consensus 79 ~f~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~ 154 (489)
+|+.+++..+.. .....+...++..+...+.+.+++.++.+... ...++||||+|+++.|+..+|+++|||++.++
T Consensus 67 ~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~ 146 (482)
T 2pq6_A 67 NFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYF 146 (482)
T ss_dssp EEEEECCCCC---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCCCCCcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEe
Confidence 999999755441 11112333334333344455666666655321 02589999999999999999999999999999
Q ss_pred chhHHHHHHHhhcccc-----CCCCcc---cC---cCCcccccCCCCCCCCCCCCcccccCC--C-chHHHHHHHHhhhc
Q 011311 155 TSGAAFLGFVLHLPTR-----GGEEFE---ES---EADSADIFTYANPVPYRVLPSLCFNKH--G-GFSAFENFGRRFKE 220 (489)
Q Consensus 155 ~~~~~~~~~~~~~~~~-----~~~~~~---~~---~~~~~~~Pgl~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~ 220 (489)
++++.....+.+++.. .+.... .. +.....+|+++ .+...+++..+.... . +...+....+..++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (482)
T 2pq6_A 147 SSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLK-NFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNK 225 (482)
T ss_dssp CSCHHHHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCC-SCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCT
T ss_pred cccHHHHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCC-CCchHHCchhhccCCcccHHHHHHHHHHHhhcc
Confidence 9988665554332210 000000 00 01101355553 355556665543221 1 12233344456667
Q ss_pred cceEEecchhHhhHHHHHHHhhcCCCCCEEEecccccC-CCCCC---CCC--CCCCCChhHHHHhhhcCCCCceEEEeec
Q 011311 221 TKGIIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDL-HGDIH---ARP--RGGGTQRDEIIRWLDDQPASSVVFLCFG 294 (489)
Q Consensus 221 ~~gi~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~-~~~~~---~~~--~~~~~~~~~l~~~l~~~~~~~vV~vs~G 294 (489)
.+++++||+++||++....+.. ..|++++|||++.. +.... .+. ..-.+.+.++.+|||.++++++||||||
T Consensus 226 ~~~vl~nt~~~le~~~~~~~~~--~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~G 303 (482)
T 2pq6_A 226 DTTILLNTFNELESDVINALSS--TIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFG 303 (482)
T ss_dssp TCCEEESSCGGGGHHHHHHHHT--TCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECC
T ss_pred CCEEEEcChHHHhHHHHHHHHH--hCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecC
Confidence 8899999999999998888876 44789999999763 22100 000 0001234579999999888899999999
Q ss_pred CCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcc
Q 011311 295 SMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIG 374 (489)
Q Consensus 295 S~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~ 374 (489)
|+...+.+++.+++.+|++.+++|||+++.....+ ....+|++|.++.++|+++++|+||.+||+|++++
T Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~----------~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~ 373 (482)
T 2pq6_A 304 STTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIG----------GSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIG 373 (482)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTT----------TGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEE
T ss_pred CcccCCHHHHHHHHHHHHhcCCcEEEEEcCCcccc----------ccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCC
Confidence 99888889999999999999999999998641100 01237888888888999999999999999999999
Q ss_pred eEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCH---H
Q 011311 375 GFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDS---E 451 (489)
Q Consensus 375 ~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~---~ 451 (489)
+|||||||||++|++++|||+|++|+++||+.||+++++.+|+|+.+. . .+++++|+++|+++|+ ++ +
T Consensus 374 ~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~-------~~~~~~l~~~i~~ll~-~~~~~~ 444 (482)
T 2pq6_A 374 GFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T-------NVKREELAKLINEVIA-GDKGKK 444 (482)
T ss_dssp EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S-------SCCHHHHHHHHHHHHT-SHHHHH
T ss_pred EEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C-------CCCHHHHHHHHHHHHc-CCcHHH
Confidence 999999999999999999999999999999999999886669999986 4 7999999999999998 66 7
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhhC
Q 011311 452 VRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 452 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
||+||+++++++++++.+||||++++++||+++++.
T Consensus 445 ~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 445 MKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999998654
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4e-43 Score=357.36 Aligned_cols=388 Identities=18% Similarity=0.209 Sum_probs=254.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV 83 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l 83 (489)
++||++++++++||++|+++||++| +++| |+|+|++++ .+.+.+. ..|++|+.+
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L--~~~G--------h~V~~~~~~----------~~~~~~~------~~g~~~~~~ 65 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQEL--VARG--------HRVSYAITD----------EFAAQVK------AAGATPVVY 65 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------HHTCEEEEC
T ss_pred cceEEEEeCCCCcccchHHHHHHHH--HHCC--------CeEEEEeCH----------HHHHHHH------hCCCEEEec
Confidence 4689999999999999999999999 9999 669999876 2344454 347899998
Q ss_pred CCCCCCCCCC----CCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHH
Q 011311 84 PKMNPPPLDY----FKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAA 159 (489)
Q Consensus 84 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~ 159 (489)
+...+..... ..+....+..+........ ..+.++++ ..+|||||+|.++.|+..+|+++|||++.+++.+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~--~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~ 142 (424)
T 2iya_A 66 DSILPKESNPEESWPEDQESAMGLFLDEAVRVL-PQLEDAYA--DDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVA 142 (424)
T ss_dssp CCCSCCTTCTTCCCCSSHHHHHHHHHHHHHHHH-HHHHHHTT--TSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCC
T ss_pred CccccccccchhhcchhHHHHHHHHHHHHHHHH-HHHHHHHh--ccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccc
Confidence 8653322111 1232233322222222222 22344444 468999999998889999999999999999876531
Q ss_pred HHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhh--------------hccceEE
Q 011311 160 FLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRF--------------KETKGII 225 (489)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~gi~ 225 (489)
............. .+.+.... ...|. .. .+... +......+..+.+.++.+ ...+.++
T Consensus 143 ~~~~~~~~~~~~~-~~~~~~~~-~~~~~---~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l 214 (424)
T 2iya_A 143 YEGFEEDVPAVQD-PTADRGEE-AAAPA---GT--GDAEE-GAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCI 214 (424)
T ss_dssp CTTHHHHSGGGSC-CCC----------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEE
T ss_pred ccccccccccccc-cccccccc-ccccc---cc--ccchh-hhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEE
Confidence 1100000000000 00000000 00000 00 00000 000000011111111111 1345667
Q ss_pred ecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHH
Q 011311 226 VNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQ 305 (489)
Q Consensus 226 ~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~ 305 (489)
+++.++++... . ...+++++|||++.... +..+|++..+++++|||++||+.....+.+.
T Consensus 215 ~~~~~~l~~~~-----~-~~~~~~~~vGp~~~~~~--------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~ 274 (424)
T 2iya_A 215 VALPRTFQIKG-----D-TVGDNYTFVGPTYGDRS--------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYR 274 (424)
T ss_dssp ESSCTTTSTTG-----G-GCCTTEEECCCCCCCCG--------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHH
T ss_pred EEcchhhCCCc-----c-CCCCCEEEeCCCCCCcc--------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHH
Confidence 77777776531 1 13356999999764221 1235776555678999999998866677889
Q ss_pred HHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhH
Q 011311 306 EIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSI 385 (489)
Q Consensus 306 ~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~ 385 (489)
++++++++.+.+++|.++... +.+.+ . ..++|+.+++|+||.++|+|+++ ||||||+||+
T Consensus 275 ~~~~al~~~~~~~~~~~g~~~---------~~~~~-~--------~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~ 334 (424)
T 2iya_A 275 TCLSAVDGLDWHVVLSVGRFV---------DPADL-G--------EVPPNVEVHQWVPQLDILTKASA--FITHAGMGST 334 (424)
T ss_dssp HHHHHHTTCSSEEEEECCTTS---------CGGGG-C--------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHH
T ss_pred HHHHHHhcCCcEEEEEECCcC---------ChHHh-c--------cCCCCeEEecCCCHHHHHhhCCE--EEECCchhHH
Confidence 999999999999999988642 00111 0 12467888999999999999998 9999999999
Q ss_pred HHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011311 386 LESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARL 465 (489)
Q Consensus 386 ~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~ 465 (489)
+||+++|||+|++|...||+.||+++++. |+|+.+..+ .+++++|+++|+++|+ |+++|++++++++++++
T Consensus 335 ~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~-------~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 335 MEALSNAVPMVAVPQIAEQTMNAERIVEL-GLGRHIPRD-------QVTAEKLREAVLAVAS-DPGVAERLAAVRQEIRE 405 (424)
T ss_dssp HHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCGG-------GCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEecCccchHHHHHHHHHC-CCEEEcCcC-------CCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998775 999998754 7899999999999998 78999999999998775
Q ss_pred HHhcCCChHHHHHHHH
Q 011311 466 ALRDGGSSYAATGRLI 481 (489)
Q Consensus 466 ~~~~~g~~~~~~~~~~ 481 (489)
. +...+.++.+.
T Consensus 406 ~----~~~~~~~~~i~ 417 (424)
T 2iya_A 406 A----GGARAAADILE 417 (424)
T ss_dssp S----CHHHHHHHHHH
T ss_pred c----CcHHHHHHHHH
Confidence 3 34444444433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=4.3e-43 Score=354.17 Aligned_cols=342 Identities=15% Similarity=0.149 Sum_probs=216.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVP 84 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ 84 (489)
++|+|+++|++||++|+++||++| ++|| |+|||++++. +.+.. ..++.+..+.
T Consensus 23 MRIL~~~~p~~GHv~P~l~LA~~L--~~rG--------h~Vt~~t~~~----------~~~~~-------~~g~~~~~~~ 75 (400)
T 4amg_A 23 MRALFITSPGLSHILPTVPLAQAL--RALG--------HEVRYATGGD----------IRAVA-------EAGLCAVDVS 75 (400)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHH--HHTT--------CEEEEEECSS----------THHHH-------TTTCEEEESS
T ss_pred CeEEEECCCchhHHHHHHHHHHHH--HHCC--------CEEEEEeCcc----------hhhHH-------hcCCeeEecC
Confidence 459999999999999999999999 9999 6699999762 23322 3467777775
Q ss_pred CCC-------CCCCCCC-------CChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCe
Q 011311 85 KMN-------PPPLDYF-------KSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPS 150 (489)
Q Consensus 85 ~~~-------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~ 150 (489)
... +...... .....+...+.......+...++ +++ ..+||+||+|.++.++..+|+.+|||+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~--~~~pD~Vv~d~~~~~~~~~A~~~gip~ 152 (400)
T 4amg_A 76 PGVNYAKLFVPDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALR-TAR--SWRPDLVVHTPTQGAGPLTAAALQLPC 152 (400)
T ss_dssp TTCCSHHHHSCCC------------CHHHHHHHHHHHHHHHHHHHHH-HHH--HHCCSEEEECTTCTHHHHHHHHTTCCE
T ss_pred CchhHhhhccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHH-HHH--hcCCCEEEECcchHHHHHHHHHcCCCc
Confidence 432 1110000 01111111112222222233222 222 258999999999999999999999999
Q ss_pred EEEechhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhh----ccceEEe
Q 011311 151 YVFFTSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFK----ETKGIIV 226 (489)
Q Consensus 151 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~gi~~ 226 (489)
+.+...+.. ..|.+.... .+.+.....+.. .......
T Consensus 153 ~~~~~~~~~------------------------~~~~~~~~~---------------~~~l~~~~~~~~~~~~~~~~~~~ 193 (400)
T 4amg_A 153 VELPLGPAD------------------------SEPGLGALI---------------RRAMSKDYERHGVTGEPTGSVRL 193 (400)
T ss_dssp EECCSSTTT------------------------CCHHHHHHH---------------HHHTHHHHHHTTCCCCCSCEEEE
T ss_pred eeecccccc------------------------cccchhhHH---------------HHHHHHHHHHhCCCcccccchhh
Confidence 876543320 011110000 000000001000 0001111
Q ss_pred cchhHhhHHHHHHHh-hcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCC--HHH
Q 011311 227 NTFEELESHAVEYLM-KCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFG--EEQ 303 (489)
Q Consensus 227 ~s~~~l~~~~~~~~~-~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~--~~~ 303 (489)
..... ...... .....+..+...+..... ...+.+|++..+++++|||||||+.... .+.
T Consensus 194 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~ 256 (400)
T 4amg_A 194 TTTPP----SVEALLPEDRRSPGAWPMRYVPYNG-------------GAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAK 256 (400)
T ss_dssp ECCCH----HHHHTSCGGGCCTTCEECCCCCCCC-------------CEECCTTCSCCTTCCEEEECCCSCC--CCSSST
T ss_pred cccCc----hhhccCcccccCCcccCcccccccc-------------cccCcccccccCCCcEEEEeCCcccccCccHHH
Confidence 11110 000000 001222333433332211 1223458888888899999999987443 356
Q ss_pred HHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCch
Q 011311 304 IQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWN 383 (489)
Q Consensus 304 ~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~ 383 (489)
+.++++++++.+.++||..++..... .. ..++|+++++|+||.++|+|+++ ||||||+|
T Consensus 257 ~~~~~~~l~~~~~~~v~~~~~~~~~~-----------~~--------~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~ 315 (400)
T 4amg_A 257 LAPLFSEVADVDAEFVLTLGGGDLAL-----------LG--------ELPANVRVVEWIPLGALLETCDA--IIHHGGSG 315 (400)
T ss_dssp THHHHHHGGGSSSEEEEECCTTCCCC-----------CC--------CCCTTEEEECCCCHHHHHTTCSE--EEECCCHH
T ss_pred HHHHHHHhhccCceEEEEecCccccc-----------cc--------cCCCCEEEEeecCHHHHhhhhhh--eeccCCcc
Confidence 88899999999999999987652110 11 22367789999999999999998 99999999
Q ss_pred hHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 011311 384 SILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKA 463 (489)
Q Consensus 384 s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~ 463 (489)
|++||+++|||+|++|+++||+.||+++++. |+|+.++.. +++++ +|+++|+ |++||+||+++++++
T Consensus 316 s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~-G~g~~l~~~-------~~~~~----al~~lL~-d~~~r~~a~~l~~~~ 382 (400)
T 4amg_A 316 TLLTALAAGVPQCVIPHGSYQDTNRDVLTGL-GIGFDAEAG-------SLGAE----QCRRLLD-DAGLREAALRVRQEM 382 (400)
T ss_dssp HHHHHHHHTCCEEECCC---CHHHHHHHHHH-TSEEECCTT-------TCSHH----HHHHHHH-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEecCcccHHHHHHHHHHC-CCEEEcCCC-------CchHH----HHHHHHc-CHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998776 999998754 66654 6677888 899999999999999
Q ss_pred HHH
Q 011311 464 RLA 466 (489)
Q Consensus 464 ~~~ 466 (489)
++.
T Consensus 383 ~~~ 385 (400)
T 4amg_A 383 SEM 385 (400)
T ss_dssp HTS
T ss_pred HcC
Confidence 875
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.1e-42 Score=347.14 Aligned_cols=355 Identities=15% Similarity=0.139 Sum_probs=236.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPK 85 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~ 85 (489)
||+|+++++.||++|+++||++| +++| |+|||+++. .+.+.+. ..|++|+.++.
T Consensus 2 ~Il~~~~~~~GHv~P~l~la~~L--~~~G--------h~V~~~~~~----------~~~~~v~------~~g~~~~~i~~ 55 (415)
T 1iir_A 2 RVLLATCGSRGDTEPLVALAVRV--RDLG--------ADVRMCAPP----------DCAERLA------EVGVPHVPVGP 55 (415)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------HTTCCEEECCC
T ss_pred eEEEEcCCCchhHHHHHHHHHHH--HHCC--------CeEEEEcCH----------HHHHHHH------HcCCeeeeCCC
Confidence 49999999999999999999999 9999 669999876 2344444 34789999886
Q ss_pred CCCCCCCCC-CChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCC-CCch--HHHHHHHhCCCeEEEechhHHHH
Q 011311 86 MNPPPLDYF-KSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDF-FCSS--MIDTANELGVPSYVFFTSGAAFL 161 (489)
Q Consensus 86 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~-~~~~--~~~vA~~lgiP~v~~~~~~~~~~ 161 (489)
......... ......+ ...........++++.+. ..+||+||+|. +..| +..+|+.+|||++.+++.+....
T Consensus 56 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 131 (415)
T 1iir_A 56 SARAPIQRAKPLTAEDV---RRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP 131 (415)
T ss_dssp -------CCSCCCHHHH---HHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC
T ss_pred CHHHHhhcccccchHHH---HHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC
Confidence 531111111 1111111 111222233444544421 35899999998 6668 88999999999999887664210
Q ss_pred HHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcc-cccCCC-------chHHHHHHHHhhhccc-----------
Q 011311 162 GFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSL-CFNKHG-------GFSAFENFGRRFKETK----------- 222 (489)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~----------- 222 (489)
. .++|....++ .++.. ..+... .+..+....+.+++..
T Consensus 132 ~--------------------~~~p~~~~~~---~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 188 (415)
T 1iir_A 132 S--------------------PYYPPPPLGE---PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTF 188 (415)
T ss_dssp C--------------------SSSCCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHH
T ss_pred C--------------------cccCCccCCc---cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccc
Confidence 0 1112110000 00000 000000 0011111222222222
Q ss_pred ----eEEecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcC
Q 011311 223 ----GIIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGS 298 (489)
Q Consensus 223 ----gi~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~ 298 (489)
.++.++.+.++.. .. ... +++++||+..... ...+.++.+||+.+ +++|||++||+.
T Consensus 189 ~~~~~~l~~~~~~l~~~-----~~-~~~-~~~~vG~~~~~~~---------~~~~~~~~~~l~~~--~~~v~v~~Gs~~- 249 (415)
T 1iir_A 189 GYTDHPWVAADPVLAPL-----QP-TDL-DAVQTGAWILPDE---------RPLSPELAAFLDAG--PPPVYLGFGSLG- 249 (415)
T ss_dssp HHCSSCEECSCTTTSCC-----CC-CSS-CCEECCCCCCCCC---------CCCCHHHHHHHHTS--SCCEEEECC----
T ss_pred cCCCCEEEeeChhhcCC-----Cc-ccC-CeEeeCCCccCcc---------cCCCHHHHHHHhhC--CCeEEEeCCCCC-
Confidence 2344555555420 00 111 6899999875422 24567899999875 379999999987
Q ss_pred CCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEe
Q 011311 299 FGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVS 378 (489)
Q Consensus 299 ~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~ 378 (489)
...+.+..++++|++.+.++||++|.... + .. ..++|+.+++|+||.++|+++++ |||
T Consensus 250 ~~~~~~~~~~~al~~~~~~~v~~~g~~~~----------~--~~--------~~~~~v~~~~~~~~~~~l~~~d~--~v~ 307 (415)
T 1iir_A 250 APADAVRVAIDAIRAHGRRVILSRGWADL----------V--LP--------DDGADCFAIGEVNHQVLFGRVAA--VIH 307 (415)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECTTCTTC----------C--CS--------SCGGGEEECSSCCHHHHGGGSSE--EEE
T ss_pred CcHHHHHHHHHHHHHCCCeEEEEeCCCcc----------c--cc--------CCCCCEEEeCcCChHHHHhhCCE--EEe
Confidence 56777888999999999999999886520 0 01 12356788899999999988888 999
Q ss_pred cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHH
Q 011311 379 HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKE 458 (489)
Q Consensus 379 HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~ 458 (489)
|||+||++||+++|||+|++|++.||+.||+++++. |+|+.++.. .++.++|+++|+++ + |++|++++++
T Consensus 308 ~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~-------~~~~~~l~~~i~~l-~-~~~~~~~~~~ 377 (415)
T 1iir_A 308 HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-GVGVAHDGP-------IPTFDSLSAALATA-L-TPETHARATA 377 (415)
T ss_dssp CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSS-------SCCHHHHHHHHHHH-T-SHHHHHHHHH
T ss_pred CCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC-CCcccCCcC-------CCCHHHHHHHHHHH-c-CHHHHHHHHH
Confidence 999999999999999999999999999999998665 999988754 78999999999999 7 8999999999
Q ss_pred HHHHHH
Q 011311 459 VSEKAR 464 (489)
Q Consensus 459 l~~~~~ 464 (489)
++++++
T Consensus 378 ~~~~~~ 383 (415)
T 1iir_A 378 VAGTIR 383 (415)
T ss_dssp HHHHSC
T ss_pred HHHHHh
Confidence 998865
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.3e-41 Score=341.52 Aligned_cols=375 Identities=15% Similarity=0.091 Sum_probs=246.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPK 85 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~ 85 (489)
||++++.++.||++|+++||++| +++| |+|+|++++ .+.+.+. ..|++|+.++.
T Consensus 2 rIl~~~~~~~GH~~p~l~la~~L--~~~G--------h~V~~~~~~----------~~~~~v~------~~g~~~~~~~~ 55 (416)
T 1rrv_A 2 RVLLSVCGTRGDVEIGVALADRL--KALG--------VQTRMCAPP----------AAEERLA------EVGVPHVPVGL 55 (416)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------HHTCCEEECSC
T ss_pred eEEEEecCCCccHHHHHHHHHHH--HHCC--------CeEEEEeCH----------HHHHHHH------HcCCeeeecCC
Confidence 39999999999999999999999 9999 669999876 2344444 34788988885
Q ss_pred CCCCCCCC-C-CChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCC-CCch--HHHHHHHhCCCeEEEechhHHH
Q 011311 86 MNPPPLDY-F-KSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDF-FCSS--MIDTANELGVPSYVFFTSGAAF 160 (489)
Q Consensus 86 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~-~~~~--~~~vA~~lgiP~v~~~~~~~~~ 160 (489)
........ . ......+..+ ........++.+.+. ..+||+||+|. +..+ +..+|+.+|||++.+.+.+...
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~ 131 (416)
T 1rrv_A 56 PQHMMLQEGMPPPPPEEEQRL---AAMTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL 131 (416)
T ss_dssp CGGGCCCTTSCCCCHHHHHHH---HHHHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS
T ss_pred CHHHHHhhccccchhHHHHHH---HHHHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC
Confidence 42111100 1 1111111111 112223344444321 35899999997 4456 7889999999999887765311
Q ss_pred HHHHhhccccCCCCcccCcCCccccc-CCCCCCCCCCCCcccccC--C-CchHHHHHHHHhhhccc--------------
Q 011311 161 LGFVLHLPTRGGEEFEESEADSADIF-TYANPVPYRVLPSLCFNK--H-GGFSAFENFGRRFKETK-------------- 222 (489)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~P-gl~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~-------------- 222 (489)
. . .++| .++.+++...+.+.+... . ..+..+....+.+++..
T Consensus 132 ~-----~---------------~~~p~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 191 (416)
T 1rrv_A 132 A-----S---------------PHLPPAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHG 191 (416)
T ss_dssp C-----C---------------SSSCCCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTC
T ss_pred C-----C---------------cccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccC
Confidence 0 0 1122 110000000000000000 0 00001111112222111
Q ss_pred -eEEecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcC-CC
Q 011311 223 -GIIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGS-FG 300 (489)
Q Consensus 223 -gi~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~-~~ 300 (489)
.++.++.+.++++ ....+++++||+..... ...+.++.+||+.+ +++|||++||+.. ..
T Consensus 192 ~~~l~~~~~~l~~~--------~~~~~~~~vG~~~~~~~---------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~ 252 (416)
T 1rrv_A 192 ERPLLAADPVLAPL--------QPDVDAVQTGAWLLSDE---------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGI 252 (416)
T ss_dssp SSCEECSCTTTSCC--------CSSCCCEECCCCCCCCC---------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHH
T ss_pred CCeEEccCccccCC--------CCCCCeeeECCCccCcc---------CCCCHHHHHHHhcC--CCeEEEecCCCCccCh
Confidence 3455555555531 01126899999875432 24567899999875 3799999999864 34
Q ss_pred HHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecC
Q 011311 301 EEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHC 380 (489)
Q Consensus 301 ~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~Hg 380 (489)
.+.+.++++++++.+.++||++|.... + + ...++|+.+++|+||.++|+++++ |||||
T Consensus 253 ~~~~~~~~~al~~~~~~~v~~~g~~~~----------~-----~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~ 310 (416)
T 1rrv_A 253 ADAAKVAVEAIRAQGRRVILSRGWTEL----------V-----L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHG 310 (416)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTTTC----------C-----C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECC
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCccc----------c-----c-----cCCCCCEEEeccCChHHHhccCCE--EEecC
Confidence 456888999999999999999986520 0 0 012357788999999999999988 99999
Q ss_pred CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011311 381 GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVS 460 (489)
Q Consensus 381 G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~ 460 (489)
|+||++||+++|||+|++|++.||+.||+++++. |+|+.+... .+++++|+++|+++ + |++|++++++++
T Consensus 311 G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~-------~~~~~~l~~~i~~l-~-~~~~~~~~~~~~ 380 (416)
T 1rrv_A 311 SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-GIGVAHDGP-------TPTFESLSAALTTV-L-APETRARAEAVA 380 (416)
T ss_dssp CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-TSEEECSSS-------CCCHHHHHHHHHHH-T-SHHHHHHHHHHT
T ss_pred ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC-CCccCCCCC-------CCCHHHHHHHHHHh-h-CHHHHHHHHHHH
Confidence 9999999999999999999999999999998776 999988754 78999999999999 7 899999999998
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 461 EKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 461 ~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
+++++ .++. +.++.++..+.+
T Consensus 381 ~~~~~----~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 381 GMVLT----DGAA-AAADLVLAAVGR 401 (416)
T ss_dssp TTCCC----CHHH-HHHHHHHHHHHC
T ss_pred HHHhh----cCcH-HHHHHHHHHHhc
Confidence 88664 3333 555544244443
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=5.6e-39 Score=324.49 Aligned_cols=363 Identities=15% Similarity=0.129 Sum_probs=242.6
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|| |+|++.++.||++|+++||++| +++| |+|+|++++ .+.+.+. ..|++|
T Consensus 1 Mr----Ili~~~gt~Ghv~p~~~La~~L--~~~G--------h~V~v~~~~----------~~~~~v~------~~g~~~ 50 (404)
T 3h4t_A 1 MG----VLITGCGSRGDTEPLVALAARL--RELG--------ADARMCLPP----------DYVERCA------EVGVPM 50 (404)
T ss_dssp -C----EEEEEESSHHHHHHHHHHHHHH--HHTT--------CCEEEEECG----------GGHHHHH------HTTCCE
T ss_pred Ce----EEEEeCCCCccHHHHHHHHHHH--HHCC--------CeEEEEeCH----------HHHHHHH------HcCCce
Confidence 77 9999999999999999999999 9999 559999876 3456665 457899
Q ss_pred EEcCCCCCCC-CCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchH---HHHHHHhCCCeEEEech
Q 011311 81 IGVPKMNPPP-LDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSM---IDTANELGVPSYVFFTS 156 (489)
Q Consensus 81 ~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~---~~vA~~lgiP~v~~~~~ 156 (489)
..++...... .........+...+.......++.. .++. .+||+||+|....++ ..+|+++|||++.+..+
T Consensus 51 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~ 125 (404)
T 3h4t_A 51 VPVGRAVRAGAREPGELPPGAAEVVTEVVAEWFDKV-PAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLS 125 (404)
T ss_dssp EECSSCSSGGGSCTTCCCTTCGGGHHHHHHHHHHHH-HHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESS
T ss_pred eecCCCHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcC
Confidence 9887543110 0000011111111112222222222 2232 279999998665544 68899999999988766
Q ss_pred hHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEE-----------
Q 011311 157 GAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGII----------- 225 (489)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~----------- 225 (489)
+.... .+.+. . . ....... .+..+....+.++...|+.
T Consensus 126 p~~~~-----------------------~~~~~--~----~-~~~~~~~-~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~ 174 (404)
T 3h4t_A 126 PDHLP-----------------------SEQSQ--A----E-RDMYNQG-ADRLFGDAVNSHRASIGLPPVEHLYDYGYT 174 (404)
T ss_dssp GGGSG-----------------------GGSCH--H----H-HHHHHHH-HHHHHHHHHHHHHHHTTCCCCCCHHHHHHC
T ss_pred CccCC-----------------------ChhHH--H----H-HHHHHHH-HHHHhHHHHHHHHHHcCCCCCcchhhcccc
Confidence 53100 00000 0 0 0000000 0122222333333333322
Q ss_pred ----ecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCH
Q 011311 226 ----VNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGE 301 (489)
Q Consensus 226 ----~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~ 301 (489)
.+..+.+.+ .+++.++++++|+++.... ...++++.+|++.. +++|||++||+.. ..
T Consensus 175 ~~~l~~~~~~l~p-------~~~~~~~~~~~G~~~~~~~---------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~ 235 (404)
T 3h4t_A 175 DQPWLAADPVLSP-------LRPTDLGTVQTGAWILPDQ---------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PA 235 (404)
T ss_dssp SSCEECSCTTTSC-------CCTTCCSCCBCCCCCCCCC---------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CT
T ss_pred CCeEEeeCcceeC-------CCCCCCCeEEeCccccCCC---------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cH
Confidence 111111111 0012235788997765332 35678999999853 5799999999876 66
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCC
Q 011311 302 EQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCG 381 (489)
Q Consensus 302 ~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG 381 (489)
+.+..+++++++.++++||+.++... + .+ ..++|+.+++|+||.++|+++++ ||||||
T Consensus 236 ~~~~~~~~al~~~~~~vv~~~g~~~~----------~----~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG 293 (404)
T 3h4t_A 236 EAARVAIEAVRAQGRRVVLSSGWAGL----------G----RI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGG 293 (404)
T ss_dssp THHHHHHHHHHHTTCCEEEECTTTTC----------C----CS------SCCTTEEEESSCCHHHHGGGSSE--EEECCC
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCccc----------c----cc------cCCCCEEEecCCCHHHHHhhCcE--EEECCc
Confidence 77889999999999999999886521 0 01 12367889999999999999998 999999
Q ss_pred chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 011311 382 WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSE 461 (489)
Q Consensus 382 ~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~ 461 (489)
+||+.|++++|||+|++|+++||+.||+++++. |+|+.+... ++++++|.++|+++++ ++|+++++++++
T Consensus 294 ~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~~-------~~~~~~l~~ai~~ll~--~~~~~~~~~~~~ 363 (404)
T 3h4t_A 294 AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDGP-------TPTVESLSAALATALT--PGIRARAAAVAG 363 (404)
T ss_dssp HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSS-------SCCHHHHHHHHHHHTS--HHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccCcC-------CCCHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 999999999999999999999999999998776 999998754 7899999999999997 789999999988
Q ss_pred HHHHHHhcCCChHHHHHHHHHHHh
Q 011311 462 KARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 462 ~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
.+++ .+..+.++.+.+.+.
T Consensus 364 ~~~~-----~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 364 TIRT-----DGTTVAAKLLLEAIS 382 (404)
T ss_dssp TCCC-----CHHHHHHHHHHHHHH
T ss_pred HHhh-----hHHHHHHHHHHHHHh
Confidence 8543 344455555444443
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.5e-37 Score=315.29 Aligned_cols=369 Identities=16% Similarity=0.154 Sum_probs=246.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVP 84 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ 84 (489)
+||+|+++++.||++|+++||++| +++| |+|+|+++. .+.+.+. ..|++|..++
T Consensus 21 ~rIl~~~~~~~GHv~p~l~La~~L--~~~G--------h~V~v~~~~----------~~~~~~~------~~G~~~~~~~ 74 (415)
T 3rsc_A 21 AHLLIVNVASHGLILPTLTVVTEL--VRRG--------HRVSYVTAG----------GFAEPVR------AAGATVVPYQ 74 (415)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------HTTCEEEECC
T ss_pred CEEEEEeCCCccccccHHHHHHHH--HHCC--------CEEEEEeCH----------HHHHHHH------hcCCEEEecc
Confidence 489999999999999999999999 9999 669999965 3466665 4579999988
Q ss_pred CCCCCCCC----CCCChHHHHHH-HHHHhhHHHHHHHHHHHhcCCCCeeEEEeC-CCCchHHHHHHHhCCCeEEEechhH
Q 011311 85 KMNPPPLD----YFKSPEKFITE-YVDSHKDCIKEAIIEHVLNNNVKIAGLVLD-FFCSSMIDTANELGVPSYVFFTSGA 158 (489)
Q Consensus 85 ~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D-~~~~~~~~vA~~lgiP~v~~~~~~~ 158 (489)
...+.... ...++...+.. +.......+.. +.++++ ..+||+||+| +...++..+|+++|||++.+.+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~--~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~ 151 (415)
T 3rsc_A 75 SEIIDADAAEVFGSDDLGVRPHLMYLRENVSVLRA-TAEALD--GDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFA 151 (415)
T ss_dssp CSTTTCCHHHHHHSSSSCHHHHHHHHHHHHHHHHH-HHHHHS--SSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCC
T ss_pred ccccccccchhhccccHHHHHHHHHHHHHHHHHHH-HHHHHh--ccCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccc
Confidence 54322110 00111111222 22222222333 333443 4689999999 7778888999999999998764321
Q ss_pred HHHHHHhhccccCCCCcccCcCCccccc--CCCCCCCCCCCCcccccCCCchHHHHHHHHhhhcc---------------
Q 011311 159 AFLGFVLHLPTRGGEEFEESEADSADIF--TYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKET--------------- 221 (489)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P--gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 221 (489)
.. . .+.+ .+.... +...+. .+..+...++.+...
T Consensus 152 ~~-----------~----------~~~~~~~~~~~~-~~~~p~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (415)
T 3rsc_A 152 SN-----------E----------HYSFSQDMVTLA-GTIDPL-------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVE 202 (415)
T ss_dssp CC-----------S----------SCCHHHHHHHHH-TCCCGG-------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCC
T ss_pred cc-----------C----------cccccccccccc-ccCChh-------hHHHHHHHHHHHHHHcCCCCChhhhhcCCC
Confidence 00 0 0000 000000 000000 011111112222111
Q ss_pred ceEEecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCH
Q 011311 222 KGIIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGE 301 (489)
Q Consensus 222 ~gi~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~ 301 (489)
+..+......++.. .. ....+++++||++.... +..+|+...+++++|||++||......
T Consensus 203 ~~~l~~~~~~~~~~-----~~-~~~~~~~~vGp~~~~~~--------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~ 262 (415)
T 3rsc_A 203 QLNLVFVPKAFQIA-----GD-TFDDRFVFVGPCFDDRR--------------FLGEWTRPADDLPVVLVSLGTTFNDRP 262 (415)
T ss_dssp SEEEESSCTTTSTT-----GG-GCCTTEEECCCCCCCCG--------------GGCCCCCCSSCCCEEEEECTTTSCCCH
T ss_pred CeEEEEcCcccCCC-----cc-cCCCceEEeCCCCCCcc--------------cCcCccccCCCCCEEEEECCCCCCChH
Confidence 22222222222211 11 12334899998764322 112354444567899999999876667
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCC
Q 011311 302 EQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCG 381 (489)
Q Consensus 302 ~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG 381 (489)
+.+..+++++.+.+.++||.++... +.+.+ ...++|+.+.+|+||.++|+++++ ||||||
T Consensus 263 ~~~~~~~~al~~~~~~~v~~~g~~~---------~~~~l---------~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G 322 (415)
T 3rsc_A 263 GFFRDCARAFDGQPWHVVMTLGGQV---------DPAAL---------GDLPPNVEAHRWVPHVKVLEQATV--CVTHGG 322 (415)
T ss_dssp HHHHHHHHHHTTSSCEEEEECTTTS---------CGGGG---------CCCCTTEEEESCCCHHHHHHHEEE--EEESCC
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCC---------ChHHh---------cCCCCcEEEEecCCHHHHHhhCCE--EEECCc
Confidence 7788999999999999999988642 00111 122467888999999999999999 999999
Q ss_pred chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 011311 382 WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSE 461 (489)
Q Consensus 382 ~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~ 461 (489)
+||++|++++|+|+|++|...||+.||+++++. |+|+.+..+ +++.++|.++|+++++ |++++++++++++
T Consensus 323 ~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~~~~~-------~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~ 393 (415)
T 3rsc_A 323 MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVLPGE-------KADGDTLLAAVGAVAA-DPALLARVEAMRG 393 (415)
T ss_dssp HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEECCGG-------GCCHHHHHHHHHHHHT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEEcccC-------CCCHHHHHHHHHHHHc-CHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 999998765 7899999999999999 8999999999999
Q ss_pred HHHHHHhcCCChHHHHHHHHHHH
Q 011311 462 KARLALRDGGSSYAATGRLIEDL 484 (489)
Q Consensus 462 ~~~~~~~~~g~~~~~~~~~~~~~ 484 (489)
.+.+ .++..+.++.+.+.+
T Consensus 394 ~~~~----~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 394 HVRR----AGGAARAADAVEAYL 412 (415)
T ss_dssp HHHH----SCHHHHHHHHHHHHH
T ss_pred HHHh----cCHHHHHHHHHHHHh
Confidence 8766 355556665555444
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.8e-36 Score=305.68 Aligned_cols=370 Identities=17% Similarity=0.141 Sum_probs=247.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVP 84 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ 84 (489)
+||+|+++++.||++|+++||++| +++| |+|+|++++ .+.+.+. ..|++|..++
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L--~~~G--------heV~v~~~~----------~~~~~~~------~~G~~~~~~~ 58 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSEL--ARRG--------HRITYVTTP----------LFADEVK------AAGAEVVLYK 58 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHH--HHTT--------CEEEEEECH----------HHHHHHH------HTTCEEEECC
T ss_pred CEEEEEeCCCCcccccHHHHHHHH--HhCC--------CEEEEEcCH----------HHHHHHH------HcCCEEEecc
Confidence 389999999999999999999999 9999 669999875 4566665 4579999887
Q ss_pred CCCCCCC----CCCCChHHHHHH-HHHHhhHHHHHHHHHHHhcCCCCeeEEEeC-CCCchHHHHHHHhCCCeEEEechhH
Q 011311 85 KMNPPPL----DYFKSPEKFITE-YVDSHKDCIKEAIIEHVLNNNVKIAGLVLD-FFCSSMIDTANELGVPSYVFFTSGA 158 (489)
Q Consensus 85 ~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D-~~~~~~~~vA~~lgiP~v~~~~~~~ 158 (489)
...+... ....++...+.. +.......+.. +.++++ ..+||+||+| ++..++..+|+++|||++.+.+...
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~--~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~ 135 (402)
T 3ia7_A 59 SEFDTFHVPEVVKQEDAETQLHLVYVRENVAILRA-AEEALG--DNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFA 135 (402)
T ss_dssp CGGGTSSSSSSSCCTTHHHHHHHHHHHHHHHHHHH-HHHHHT--TCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCC
T ss_pred cccccccccccccccchHHHHHHHHHHHHHHHHHH-HHHHHh--ccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccc
Confidence 5432111 111233333333 33322223333 333343 4699999999 7888889999999999988764322
Q ss_pred HHHHHHhhccccCCCCcccCcCCccccc--CCCCCCCCCCCCcccccCCCchHHHHHHHHhhhcc---------------
Q 011311 159 AFLGFVLHLPTRGGEEFEESEADSADIF--TYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKET--------------- 221 (489)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P--gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 221 (489)
.. . .+.+ .+.... ....+. .+..+....+.+...
T Consensus 136 ~~-----------~----------~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 186 (402)
T 3ia7_A 136 AN-----------E----------HYSLFKELWKSN-GQRHPA-------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIE 186 (402)
T ss_dssp CB-----------T----------TBCHHHHHHHHH-TCCCGG-------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCC
T ss_pred cC-----------c----------cccccccccccc-cccChh-------hHHHHHHHHHHHHHHcCCCCChhhhhcCCC
Confidence 00 0 0000 000000 000000 011111111211111
Q ss_pred ceEEecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCH
Q 011311 222 KGIIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGE 301 (489)
Q Consensus 222 ~gi~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~ 301 (489)
+..+...-..++.. .. ....+++++||+..... +..+|+...+++++|||++||......
T Consensus 187 ~~~l~~~~~~~~~~-----~~-~~~~~~~~vGp~~~~~~--------------~~~~~~~~~~~~~~v~v~~G~~~~~~~ 246 (402)
T 3ia7_A 187 GLTIVFLPKSFQPF-----AE-TFDERFAFVGPTLTGRD--------------GQPGWQPPRPDAPVLLVSLGNQFNEHP 246 (402)
T ss_dssp SCEEESSCGGGSTT-----GG-GCCTTEEECCCCCCC------------------CCCCCSSTTCCEEEEECCSCSSCCH
T ss_pred CeEEEEcChHhCCc-----cc-cCCCCeEEeCCCCCCcc--------------cCCCCcccCCCCCEEEEECCCCCcchH
Confidence 22232222222211 11 12345899998764322 122354444567899999999986666
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCC
Q 011311 302 EQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCG 381 (489)
Q Consensus 302 ~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG 381 (489)
+.+..+++++.+.+.+++|.+|... +.+. + ...++|+.+.+|+|+.++|+++++ ||||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~~~---------~~~~----~-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G 306 (402)
T 3ia7_A 247 EFFRACAQAFADTPWHVVMAIGGFL---------DPAV----L-----GPLPPNVEAHQWIPFHSVLAHARA--CLTHGT 306 (402)
T ss_dssp HHHHHHHHHHTTSSCEEEEECCTTS---------CGGG----G-----CSCCTTEEEESCCCHHHHHTTEEE--EEECCC
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCcC---------Chhh----h-----CCCCCcEEEecCCCHHHHHhhCCE--EEECCC
Confidence 7788999999999999999988642 0011 1 113467888999999999999998 999999
Q ss_pred chhHHHHHHhCCcEEeccC-cchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011311 382 WNSILESVWFGVPIVTWPI-YAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVS 460 (489)
Q Consensus 382 ~~s~~eal~~GvP~v~~P~-~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~ 460 (489)
+||+.|++++|+|+|++|. ..||+.||+++++. |+|+.+..+ +++++.|.++|+++++ |+++++++++++
T Consensus 307 ~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~~-------~~~~~~l~~~~~~ll~-~~~~~~~~~~~~ 377 (402)
T 3ia7_A 307 TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRPD-------QLEPASIREAVERLAA-DSAVRERVRRMQ 377 (402)
T ss_dssp HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCGG-------GCSHHHHHHHHHHHHH-CHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccCC-------CCCHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 9999999999999999999 99999999998876 999998765 7899999999999999 899999999998
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 461 EKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 461 ~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
+.+.+ .+++.+.++.+.+.+.
T Consensus 378 ~~~~~----~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 378 RDILS----SGGPARAADEVEAYLG 398 (402)
T ss_dssp HHHHT----SCHHHHHHHHHHHHHH
T ss_pred HHHhh----CChHHHHHHHHHHHHh
Confidence 88654 4566666665555544
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.2e-35 Score=302.80 Aligned_cols=373 Identities=16% Similarity=0.170 Sum_probs=243.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVP 84 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ 84 (489)
+||++++.++.||++|+++|+++| +++| |+|+|+++. .+.+.+. ..|++++.++
T Consensus 8 ~kIl~~~~~~~Gh~~p~~~la~~L--~~~G--------~~V~~~~~~----------~~~~~~~------~~g~~~~~~~ 61 (430)
T 2iyf_A 8 AHIAMFSIAAHGHVNPSLEVIREL--VARG--------HRVTYAIPP----------VFADKVA------ATGPRPVLYH 61 (430)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------TTSCEEEECC
T ss_pred ceEEEEeCCCCccccchHHHHHHH--HHCC--------CeEEEEeCH----------HHHHHHH------hCCCEEEEcC
Confidence 589999999999999999999999 9999 669999876 2344454 4578999888
Q ss_pred CCCCCCCCC----CCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHH
Q 011311 85 KMNPPPLDY----FKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAF 160 (489)
Q Consensus 85 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 160 (489)
...+..... ..++...+..+.......+.. +.++++ ..+||+||+|.+..++..+|+.+|||++.+++.....
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~--~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~ 138 (430)
T 2iyf_A 62 STLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQ-LADAYA--DDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAW 138 (430)
T ss_dssp CCSCCTTSCGGGGCSSHHHHHHHHHHHHHHHHHH-HHHHHT--TSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCC
T ss_pred CcCccccccccccchhhHHHHHHHHHHHHHHHHH-HHHHhh--ccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccc
Confidence 643222111 112222222222222222222 334444 4689999999887788999999999999887543200
Q ss_pred HHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHH----------hhhccceEEecchh
Q 011311 161 LGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGR----------RFKETKGIIVNTFE 230 (489)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~gi~~~s~~ 230 (489)
.. +.... .+++.... ...+. . ........+... .....+.+++++..
T Consensus 139 ~~-~~~~~----------------~~~~~~~~--~~~~~-~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 195 (430)
T 2iyf_A 139 KG-YEEEV----------------AEPMWREP--RQTER-G---RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPK 195 (430)
T ss_dssp TT-HHHHT----------------HHHHHHHH--HHSHH-H---HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCG
T ss_pred cc-ccccc----------------ccchhhhh--ccchH-H---HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcH
Confidence 00 00000 00000000 00000 0 000000111111 11134567777777
Q ss_pred HhhHHHHHHHhhcCCCCC-EEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHH
Q 011311 231 ELESHAVEYLMKCDGVPP-VYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIAS 309 (489)
Q Consensus 231 ~l~~~~~~~~~~~~~~p~-~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~ 309 (489)
.++... . ...++ ++++||.+..... ..+|.+..+++++|||++||+.....+.+.++++
T Consensus 196 ~~~~~~----~--~~~~~~v~~vG~~~~~~~~--------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~ 255 (430)
T 2iyf_A 196 ALQPHA----D--RVDEDVYTFVGACQGDRAE--------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVR 255 (430)
T ss_dssp GGSTTG----G--GSCTTTEEECCCCC-------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHH
T ss_pred HhCCCc----c--cCCCccEEEeCCcCCCCCC--------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHH
Confidence 766421 1 13346 9999986542210 1135544445689999999988555677888999
Q ss_pred HHhhc-CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHH
Q 011311 310 GLEKS-GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILES 388 (489)
Q Consensus 310 al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~ea 388 (489)
++++. +.+++|.+|.... .+.+ +..++|+.+.+|+||.++|+++++ ||||||+||++||
T Consensus 256 ~l~~~~~~~~~~~~G~~~~---------~~~l---------~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea 315 (430)
T 2iyf_A 256 AFGNLPGWHLVLQIGRKVT---------PAEL---------GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEG 315 (430)
T ss_dssp HHTTCTTEEEEEECC---C---------GGGG---------CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHH
T ss_pred HHhcCCCeEEEEEeCCCCC---------hHHh---------ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHH
Confidence 99885 8899999886420 0111 012367888999999999999998 9999999999999
Q ss_pred HHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q 011311 389 VWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALR 468 (489)
Q Consensus 389 l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~ 468 (489)
+++|+|+|++|..+||+.||+++++. |+|+.+..+ .++.++|+++|+++++ |++++++++++++++++.
T Consensus 316 ~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~~~~-------~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~-- 384 (430)
T 2iyf_A 316 LATATPMIAVPQAVDQFGNADMLQGL-GVARKLATE-------EATADLLRETALALVD-DPEVARRLRRIQAEMAQE-- 384 (430)
T ss_dssp HHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCCC--------CCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHH--
T ss_pred HHhCCCEEECCCccchHHHHHHHHHc-CCEEEcCCC-------CCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhc--
Confidence 99999999999999999999998776 999988754 7899999999999998 789999999999887764
Q ss_pred cCCChHHHHHHHHH
Q 011311 469 DGGSSYAATGRLIE 482 (489)
Q Consensus 469 ~~g~~~~~~~~~~~ 482 (489)
++....++.+.+
T Consensus 385 --~~~~~~~~~i~~ 396 (430)
T 2iyf_A 385 --GGTRRAADLIEA 396 (430)
T ss_dssp --CHHHHHHHHHHT
T ss_pred --CcHHHHHHHHHH
Confidence 344445554433
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.8e-36 Score=309.89 Aligned_cols=365 Identities=16% Similarity=0.137 Sum_probs=228.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVP 84 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ 84 (489)
+||+|++.++.||++|+++||++| +++| |+|+|++++ .+.+.+. ..|++|+.++
T Consensus 21 mrIl~~~~~~~GHv~p~l~la~~L--~~~G--------heV~~~~~~----------~~~~~v~------~~G~~~~~i~ 74 (441)
T 2yjn_A 21 MRVVFSSMASKSHLFGLVPLAWAF--RAAG--------HEVRVVASP----------ALTEDIT------AAGLTAVPVG 74 (441)
T ss_dssp CEEEEECCSCHHHHTTTHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------TTTCCEEECS
T ss_pred cEEEEEcCCCcchHhHHHHHHHHH--HHCC--------CeEEEEeCc----------hhHHHHH------hCCCceeecC
Confidence 369999999999999999999999 9999 669999876 3455565 5689999988
Q ss_pred CCCCC-C---------------CCCC---CC--hHHHHHH----HHHHhh-----H-HHHHHHHHHHhcCCCCeeEEEeC
Q 011311 85 KMNPP-P---------------LDYF---KS--PEKFITE----YVDSHK-----D-CIKEAIIEHVLNNNVKIAGLVLD 133 (489)
Q Consensus 85 ~~~~~-~---------------~~~~---~~--~~~~~~~----~~~~~~-----~-~~~~~l~~~~~~~~~~~D~VI~D 133 (489)
..... + .... .. ....+.. +..... . .+.+.++.+ + ..+||+||+|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~--~~~pDlVv~d 151 (441)
T 2yjn_A 75 TDVDLVDFMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFC-R--KWRPDLVIWE 151 (441)
T ss_dssp CCCCHHHHHHHTTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHH-H--HHCCSEEEEC
T ss_pred CccchHHHhhhhhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHH-H--hcCCCEEEec
Confidence 54210 0 0000 00 0011111 111111 1 333333322 2 2589999999
Q ss_pred CCCchHHHHHHHhCCCeEEEechhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHH
Q 011311 134 FFCSSMIDTANELGVPSYVFFTSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFEN 213 (489)
Q Consensus 134 ~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (489)
.++.++..+|+.+|||++.+...+.............. .+.|.. .. ...+.+
T Consensus 152 ~~~~~~~~aA~~lgiP~v~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~~----------~~~~~~ 203 (441)
T 2yjn_A 152 PLTFAAPIAAAVTGTPHARLLWGPDITTRARQNFLGLL-----------PDQPEE-------HR----------EDPLAE 203 (441)
T ss_dssp TTCTHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHG-----------GGSCTT-------TC----------CCHHHH
T ss_pred CcchhHHHHHHHcCCCEEEEecCCCcchhhhhhhhhhc-----------cccccc-------cc----------cchHHH
Confidence 98888899999999999988654322111000000000 011100 00 001111
Q ss_pred HHHhhhccce-------------EEecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhh
Q 011311 214 FGRRFKETKG-------------IIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWL 280 (489)
Q Consensus 214 ~~~~~~~~~g-------------i~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l 280 (489)
.+..+....+ .+..+.+.++.+ ...+. ..+++.... .+.++.+|+
T Consensus 204 ~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~--------~~~~~-~~~~~~~~~-------------~~~~~~~~l 261 (441)
T 2yjn_A 204 WLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAIRLD--------TGLKT-VGMRYVDYN-------------GPSVVPEWL 261 (441)
T ss_dssp HHHHHHHHTTCCCCCGGGTSCSSEEECSCGGGSCC--------CCCCE-EECCCCCCC-------------SSCCCCGGG
T ss_pred HHHHHHHHcCCCCCCccccCCCeEEEecCccccCC--------CCCCC-CceeeeCCC-------------CCcccchHh
Confidence 1111111111 222222222210 01110 122222110 122345788
Q ss_pred hcCCCCceEEEeecCCcCC---CHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCc
Q 011311 281 DDQPASSVVFLCFGSMGSF---GEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGM 357 (489)
Q Consensus 281 ~~~~~~~vV~vs~GS~~~~---~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 357 (489)
+..+++++|||++||+... ..+.+..+++++.+.++++||+.++.. .+. +. ..++|+.
T Consensus 262 ~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~----------~~~----l~-----~~~~~v~ 322 (441)
T 2yjn_A 262 HDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQ----------LEG----VA-----NIPDNVR 322 (441)
T ss_dssp SSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTT----------TSS----CS-----SCCSSEE
T ss_pred hcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcc----------hhh----hc-----cCCCCEE
Confidence 8666678999999998753 234577789999989999999988542 111 11 1236788
Q ss_pred cccccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHH
Q 011311 358 ICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADE 437 (489)
Q Consensus 358 v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~ 437 (489)
+.+|+||.++|+++++ ||||||+||++|++++|||+|++|+..||+.||+++++. |+|+.+... +++.++
T Consensus 323 ~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~-------~~~~~~ 392 (441)
T 2yjn_A 323 TVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVP-------ELTPDQ 392 (441)
T ss_dssp ECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTT-------TCCHHH
T ss_pred EecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcccc-------cCCHHH
Confidence 9999999999999998 999999999999999999999999999999999998776 999988754 789999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 438 LARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 438 l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
|.++|+++++ |++++++++++++.+++. ++..+.++.+.+
T Consensus 393 l~~~i~~ll~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ 432 (441)
T 2yjn_A 393 LRESVKRVLD-DPAHRAGAARMRDDMLAE----PSPAEVVGICEE 432 (441)
T ss_dssp HHHHHHHHHH-CHHHHHHHHHHHHHHHTS----CCHHHHHHHHHH
T ss_pred HHHHHHHHhc-CHHHHHHHHHHHHHHHcC----CCHHHHHHHHHH
Confidence 9999999998 899999999999887653 444454444443
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.4e-35 Score=295.91 Aligned_cols=348 Identities=13% Similarity=0.113 Sum_probs=231.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKM 86 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~ 86 (489)
|++++.++.||++|+++||++| +++| |+|+|+++. .+.+.+. ..|++++.++..
T Consensus 3 Il~~~~~~~Gh~~p~~~la~~L--~~~G--------h~V~~~~~~----------~~~~~~~------~~g~~~~~~~~~ 56 (384)
T 2p6p_A 3 ILFVAAGSPATVFALAPLATAA--RNAG--------HQVVMAANQ----------DMGPVVT------GVGLPAVATTDL 56 (384)
T ss_dssp EEEECCSSHHHHHHHHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------HTTCCEEESCSS
T ss_pred EEEEeCCccchHhHHHHHHHHH--HHCC--------CEEEEEeCH----------HHHHHHH------hCCCEEEEeCCc
Confidence 9999999999999999999999 9999 669999865 2244443 347888888753
Q ss_pred CC-CC-------CC-CC-CChH--HHH-HH-HHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEE
Q 011311 87 NP-PP-------LD-YF-KSPE--KFI-TE-YVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYV 152 (489)
Q Consensus 87 ~~-~~-------~~-~~-~~~~--~~~-~~-~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~ 152 (489)
.. .. .. .. .... ..+ .. +.......+.... ++++ ..+||+||+|.+..++..+|+.+|||++.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~--~~~pD~Vi~~~~~~~~~~~a~~~giP~v~ 133 (384)
T 2p6p_A 57 PIRHFITTDREGRPEAIPSDPVAQARFTGRWFARMAASSLPRML-DFSR--AWRPDLIVGGTMSYVAPLLALHLGVPHAR 133 (384)
T ss_dssp CHHHHHHBCTTSCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--HHCCSEEEEETTCTHHHHHHHHHTCCEEE
T ss_pred chHHHHhhhcccCccccCcchHHHHHHHHHHHHhhHHHHHHHHH-HHHh--ccCCcEEEECcchhhHHHHHHhcCCCEEE
Confidence 20 00 00 00 1101 111 11 1111112223322 2222 24899999998878888999999999987
Q ss_pred EechhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhh-----hccceEEec
Q 011311 153 FFTSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRF-----KETKGIIVN 227 (489)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~gi~~~ 227 (489)
+...+. ...++ ...+ .....+..... .....++.+
T Consensus 134 ~~~~~~-------------------------~~~~~---------~~~~------~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (384)
T 2p6p_A 134 QTWDAV-------------------------DADGI---------HPGA------DAELRPELSELGLERLPAPDLFIDI 173 (384)
T ss_dssp ECCSSC-------------------------CCTTT---------HHHH------HHHTHHHHHHTTCSSCCCCSEEEEC
T ss_pred eccCCc-------------------------ccchh---------hHHH------HHHHHHHHHHcCCCCCCCCCeEEEE
Confidence 753210 00000 0000 00000111111 013345666
Q ss_pred chhHhhHHHHHHHhhcCCCC--CEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCC-----C
Q 011311 228 TFEELESHAVEYLMKCDGVP--PVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSF-----G 300 (489)
Q Consensus 228 s~~~l~~~~~~~~~~~~~~p--~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~-----~ 300 (489)
+...++... ..+ ++.+++ . . . +.++.+|++..+++++|||++||+... +
T Consensus 174 ~~~~~~~~~--------~~~~~~~~~~~-~--~-~------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~ 229 (384)
T 2p6p_A 174 CPPSLRPAN--------AAPARMMRHVA-T--S-R------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRN 229 (384)
T ss_dssp SCGGGSCTT--------SCCCEECCCCC-C--C-C------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCC
T ss_pred CCHHHCCCC--------CCCCCceEecC-C--C-C------------CCCCCchhhcCCCCCEEEEECCCCCcccccccc
Confidence 666655320 111 122222 1 0 1 123456887755668999999998754 4
Q ss_pred HHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecC
Q 011311 301 EEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHC 380 (489)
Q Consensus 301 ~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~Hg 380 (489)
.+.+..++++|.+.+.+++|+.++.. .+.+. ..++|+.+ +|+||.++|+++++ |||||
T Consensus 230 ~~~~~~~~~al~~~~~~~~~~~g~~~------------------~~~l~-~~~~~v~~-~~~~~~~~l~~~d~--~v~~~ 287 (384)
T 2p6p_A 230 FDFLRGLAKDLVRWDVELIVAAPDTV------------------AEALR-AEVPQARV-GWTPLDVVAPTCDL--LVHHA 287 (384)
T ss_dssp CTTHHHHHHHHHTTTCEEEEECCHHH------------------HHHHH-HHCTTSEE-ECCCHHHHGGGCSE--EEECS
T ss_pred HHHHHHHHHHHhcCCcEEEEEeCCCC------------------HHhhC-CCCCceEE-cCCCHHHHHhhCCE--EEeCC
Confidence 46788899999999999999987430 01111 24578899 99999999999998 99999
Q ss_pred CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011311 381 GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVS 460 (489)
Q Consensus 381 G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~ 460 (489)
|+||++||+++|+|+|++|...||+.||+++++. |+|+.+... .++.++|+++|+++|+ |+++++++++++
T Consensus 288 G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-g~g~~~~~~-------~~~~~~l~~~i~~ll~-~~~~~~~~~~~~ 358 (384)
T 2p6p_A 288 GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-GAAIALLPG-------EDSTEAIADSCQELQA-KDTYARRAQDLS 358 (384)
T ss_dssp CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTT-------CCCHHHHHHHHHHHHH-CHHHHHHHHHHH
T ss_pred cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC-CCeEecCcC-------CCCHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 9999999999999999999999999999998776 999988754 6899999999999999 799999999999
Q ss_pred HHHHHHHhcCCChHHHHHHHHH
Q 011311 461 EKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 461 ~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
+++++. ++..+.++.+.+
T Consensus 359 ~~~~~~----~~~~~~~~~i~~ 376 (384)
T 2p6p_A 359 REISGM----PLPATVVTALEQ 376 (384)
T ss_dssp HHHHTS----CCHHHHHHHHHH
T ss_pred HHHHhC----CCHHHHHHHHHH
Confidence 998764 345555544443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1e-32 Score=278.11 Aligned_cols=351 Identities=14% Similarity=0.102 Sum_probs=212.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVP 84 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ 84 (489)
++|+|++.++.||++|+++|+++| +++| |+|+++++. .+.+.+. ..|+.+..++
T Consensus 16 MrIl~~~~~~~gh~~~~~~La~~L--~~~G--------heV~v~~~~----------~~~~~~~------~~G~~~~~~~ 69 (398)
T 4fzr_A 16 MRILVIAGCSEGFVMPLVPLSWAL--RAAG--------HEVLVAASE----------NMGPTVT------GAGLPFAPTC 69 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHH--HHTT--------CEEEEEEEG----------GGHHHHH------HTTCCEEEEE
T ss_pred eEEEEEcCCCcchHHHHHHHHHHH--HHCC--------CEEEEEcCH----------HHHHHHH------hCCCeeEecC
Confidence 469999999999999999999999 9999 669999875 3455554 4577777776
Q ss_pred CCCC---------CCCC--CCCChHHHHHHHHHH----hhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCC
Q 011311 85 KMNP---------PPLD--YFKSPEKFITEYVDS----HKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVP 149 (489)
Q Consensus 85 ~~~~---------~~~~--~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP 149 (489)
.... .... ........+...... ....+.. +.++++ ..+||+||+|....++..+|+.+|||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~--~~~pDlVv~d~~~~~~~~~a~~~giP 146 (398)
T 4fzr_A 70 PSLDMPEVLSWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDE-ALALAE--RWKPDLVLTETYSLTGPLVAATLGIP 146 (398)
T ss_dssp SSCCHHHHHSBCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHCCSEEEEETTCTHHHHHHHHHTCC
T ss_pred CccchHhhhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHH-HHHHHH--hCCCCEEEECccccHHHHHHHhhCCC
Confidence 3210 0000 001122222221111 1112222 223333 35899999998778888999999999
Q ss_pred eEEEechhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhh-----ccceE
Q 011311 150 SYVFFTSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFK-----ETKGI 224 (489)
Q Consensus 150 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~gi 224 (489)
++.+.......... .+.+ ...+......+. .....
T Consensus 147 ~v~~~~~~~~~~~~---------------------~~~~-------------------~~~l~~~~~~~~~~~~~~~~~~ 186 (398)
T 4fzr_A 147 WIEQSIRLASPELI---------------------KSAG-------------------VGELAPELAELGLTDFPDPLLS 186 (398)
T ss_dssp EEEECCSSCCCHHH---------------------HHHH-------------------HHHTHHHHHTTTCSSCCCCSEE
T ss_pred EEEeccCCCCchhh---------------------hHHH-------------------HHHHHHHHHHcCCCCCCCCCeE
Confidence 98765432100000 0000 000000000000 00111
Q ss_pred EecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCC-----
Q 011311 225 IVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSF----- 299 (489)
Q Consensus 225 ~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~----- 299 (489)
+......+... ..+....+...... ....++.+|+...+++++|||++||+...
T Consensus 187 ~~~~~~~~~~~---------~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~ 245 (398)
T 4fzr_A 187 IDVCPPSMEAQ---------PKPGTTKMRYVPYN------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNT 245 (398)
T ss_dssp EECSCGGGC-------------CCCEECCCCCCC------------CSSCCCCHHHHSCCSSCEEECC------------
T ss_pred EEeCChhhCCC---------CCCCCCCeeeeCCC------------CCCCCCchhhhcCCCCCEEEEEccCccccccccc
Confidence 22222222211 00111111111000 01123345666655678999999998633
Q ss_pred ---CHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceE
Q 011311 300 ---GEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGF 376 (489)
Q Consensus 300 ---~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~ 376 (489)
..+.+..+++++.+.+.++||+.++.. . ..+. ..++|+.+.+|+|+.++|+++++ |
T Consensus 246 ~~~~~~~~~~~~~al~~~~~~~v~~~~~~~----------~----~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~ 304 (398)
T 4fzr_A 246 IPGGLSLLQALSQELPKLGFEVVVAVSDKL----------A----QTLQ-----PLPEGVLAAGQFPLSAIMPACDV--V 304 (398)
T ss_dssp ----CCSHHHHHHHGGGGTCEEEECCCC---------------------------CCTTEEEESCCCHHHHGGGCSE--E
T ss_pred ccchHHHHHHHHHHHHhCCCEEEEEeCCcc----------h----hhhc-----cCCCcEEEeCcCCHHHHHhhCCE--E
Confidence 234588899999999999999987641 0 0011 23477889999999999999999 9
Q ss_pred EecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHH
Q 011311 377 VSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRV 456 (489)
Q Consensus 377 i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a 456 (489)
|||||.||+.||+++|+|+|++|...||+.||+++++. |+|+.+... ++++++|+++|+++++ |+++++++
T Consensus 305 v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~-------~~~~~~l~~ai~~ll~-~~~~~~~~ 375 (398)
T 4fzr_A 305 VHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPWE-------QAGVESVLAACARIRD-DSSYVGNA 375 (398)
T ss_dssp EECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC--------------CHHHHHHHHHH-CTHHHHHH
T ss_pred EecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCcc-------cCCHHHHHHHHHHHHh-CHHHHHHH
Confidence 99999999999999999999999999999999998776 999998765 7899999999999999 78999999
Q ss_pred HHHHHHHHHHHhcCCChHHHHHH
Q 011311 457 KEVSEKARLALRDGGSSYAATGR 479 (489)
Q Consensus 457 ~~l~~~~~~~~~~~g~~~~~~~~ 479 (489)
+++++.+++ ..+..+.++.
T Consensus 376 ~~~~~~~~~----~~~~~~~~~~ 394 (398)
T 4fzr_A 376 RRLAAEMAT----LPTPADIVRL 394 (398)
T ss_dssp HHHHHHHTT----SCCHHHHHHH
T ss_pred HHHHHHHHc----CCCHHHHHHH
Confidence 999888654 3444444443
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=5.3e-32 Score=272.97 Aligned_cols=346 Identities=18% Similarity=0.182 Sum_probs=219.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVP 84 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ 84 (489)
++|+|++.++.||++|+++||++| .++| |+|+|+++ .. .+.+. ..|+.+..++
T Consensus 21 MrIl~~~~~~~Ghv~~~~~La~~L--~~~G--------heV~v~~~-~~----------~~~~~------~~G~~~~~~~ 73 (398)
T 3oti_A 21 MRVLFVSSPGIGHLFPLIQLAWGF--RTAG--------HDVLIAVA-EH----------ADRAA------AAGLEVVDVA 73 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHH--HHTT--------CEEEEEES-SC----------HHHHH------TTTCEEEESS
T ss_pred CEEEEEcCCCcchHhHHHHHHHHH--HHCC--------CEEEEecc-ch----------HHHHH------hCCCeeEecC
Confidence 469999999999999999999999 9999 66999987 32 55555 5689999988
Q ss_pred CCCC---------------------CCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHH
Q 011311 85 KMNP---------------------PPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTA 143 (489)
Q Consensus 85 ~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA 143 (489)
.... ............+.. .....+... .++++ ..+||+||+|....++..+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l-~~~l~--~~~pDlVv~d~~~~~~~~aA 147 (398)
T 3oti_A 74 PDYSAVKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAA---VNRPLVDGT-MALVD--DYRPDLVVYEQGATVGLLAA 147 (398)
T ss_dssp TTCCHHHHHHHHHHHCHHHHHTGGGSCCCSGGGGHHHHHH---HHGGGHHHH-HHHHH--HHCCSEEEEETTCHHHHHHH
T ss_pred CccCHHHHhhhcccCCccccccccCChhhhHHHHHHHHHH---HHHHHHHHH-HHHHH--HcCCCEEEECchhhHHHHHH
Confidence 5310 001111111111111 111222222 22222 24899999998888888999
Q ss_pred HHhCCCeEEEechhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHh-hhccc
Q 011311 144 NELGVPSYVFFTSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRR-FKETK 222 (489)
Q Consensus 144 ~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 222 (489)
+.+|||++....... . ...+. ..... +...+...... .....
T Consensus 148 ~~~giP~v~~~~~~~------------------------~-~~~~~---------~~~~~---~l~~~~~~~~~~~~~~~ 190 (398)
T 3oti_A 148 DRAGVPAVQRNQSAW------------------------R-TRGMH---------RSIAS---FLTDLMDKHQVSLPEPV 190 (398)
T ss_dssp HHHTCCEEEECCTTC------------------------C-CTTHH---------HHHHT---TCHHHHHHTTCCCCCCS
T ss_pred HHcCCCEEEEeccCC------------------------C-ccchh---------hHHHH---HHHHHHHHcCCCCCCCC
Confidence 999999987643211 0 00000 00000 00011110000 00001
Q ss_pred eEEecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCC--C
Q 011311 223 GIIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSF--G 300 (489)
Q Consensus 223 gi~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~--~ 300 (489)
..+......+... .. ....++.++ |. ..+..+.+|+...+++++|||++||+... .
T Consensus 191 ~~~~~~~~~~~~~-----~~-~~~~~~~~~-~~---------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~ 248 (398)
T 3oti_A 191 ATIESFPPSLLLE-----AE-PEGWFMRWV-PY---------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFG 248 (398)
T ss_dssp EEECSSCGGGGTT-----SC-CCSBCCCCC-CC---------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHC
T ss_pred eEEEeCCHHHCCC-----CC-CCCCCcccc-CC---------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCc
Confidence 1121111122110 00 000011111 00 01122335666555678999999998532 4
Q ss_pred HHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecC
Q 011311 301 EEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHC 380 (489)
Q Consensus 301 ~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~Hg 380 (489)
.+.+.+++++|.+.+.++||+.++.. .+. +. ..++|+.+.+|+|+.++|+++++ |||||
T Consensus 249 ~~~~~~~~~~l~~~~~~~v~~~g~~~----------~~~----l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~ 307 (398)
T 3oti_A 249 IGAVEPIIAAAGEVDADFVLALGDLD----------ISP----LG-----TLPRNVRAVGWTPLHTLLRTCTA--VVHHG 307 (398)
T ss_dssp GGGHHHHHHHHHTSSSEEEEECTTSC----------CGG----GC-----SCCTTEEEESSCCHHHHHTTCSE--EEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCcC----------hhh----hc-----cCCCcEEEEccCCHHHHHhhCCE--EEECC
Confidence 56688899999999999999988652 011 11 22467889999999999999998 99999
Q ss_pred CchhHHHHHHhCCcEEeccCcchhhHHH--HHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHH
Q 011311 381 GWNSILESVWFGVPIVTWPIYAEQQINA--FQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKE 458 (489)
Q Consensus 381 G~~s~~eal~~GvP~v~~P~~~DQ~~na--~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~ 458 (489)
|+||+.||+++|+|+|++|+..||+.|| +++++. |+|+.++.. +.+++.|+ ++++ |+++++++++
T Consensus 308 G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~~-------~~~~~~l~----~ll~-~~~~~~~~~~ 374 (398)
T 3oti_A 308 GGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR-GIGLVSTSD-------KVDADLLR----RLIG-DESLRTAARE 374 (398)
T ss_dssp CHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH-TSEEECCGG-------GCCHHHHH----HHHH-CHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC-CCEEeeCCC-------CCCHHHHH----HHHc-CHHHHHHHHH
Confidence 9999999999999999999999999999 998776 999998765 67888887 7888 7999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHHH
Q 011311 459 VSEKARLALRDGGSSYAATGRL 480 (489)
Q Consensus 459 l~~~~~~~~~~~g~~~~~~~~~ 480 (489)
+++++++. .+..+.++.+
T Consensus 375 ~~~~~~~~----~~~~~~~~~l 392 (398)
T 3oti_A 375 VREEMVAL----PTPAETVRRI 392 (398)
T ss_dssp HHHHHHTS----CCHHHHHHHH
T ss_pred HHHHHHhC----CCHHHHHHHH
Confidence 99987653 4444444443
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.97 E-value=5.4e-31 Score=264.83 Aligned_cols=352 Identities=13% Similarity=0.152 Sum_probs=220.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc-
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV- 83 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l- 83 (489)
+||+|++.++.||++|++.|+++| +++| |+|+|+++. .+.+.+. ..|+++..+
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L--~~~G--------heV~v~~~~----------~~~~~~~------~~g~~~~~~~ 55 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWAL--QASG--------HEVLIAAPP----------ELQATAH------GAGLTTAGIR 55 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHH--HHTT--------CEEEEEECH----------HHHHHHH------HBTCEEEEC-
T ss_pred cEEEEEcCCCcchhhhHHHHHHHH--HHCC--------CEEEEecCh----------hhHHHHH------hCCCceeeec
Confidence 349999999999999999999999 9999 669999865 3455554 457888877
Q ss_pred CCCCC--CC-------C---CCCCChHHHHHHHHHHhhHH-------HHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHH
Q 011311 84 PKMNP--PP-------L---DYFKSPEKFITEYVDSHKDC-------IKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTAN 144 (489)
Q Consensus 84 ~~~~~--~~-------~---~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~ 144 (489)
..... .. . ............+....... +.. +.++++ ..+||+||+|....++..+|+
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~--~~~PD~Vv~~~~~~~~~~aa~ 132 (391)
T 3tsa_A 56 GNDRTGDTGGTTQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPE-YLRLAE--AWRPSVLLVDVCALIGRVLGG 132 (391)
T ss_dssp -------------CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHCCSEEEEETTCHHHHHHHH
T ss_pred CCccchhhhhhhcccccccccccccchhHHHHHHHHHHHHhhcchhhHHH-HHHHHH--hcCCCEEEeCcchhHHHHHHH
Confidence 32110 00 0 00001111111111111111 222 233333 258999999987777888999
Q ss_pred HhCCCeEEEechhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhc----
Q 011311 145 ELGVPSYVFFTSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKE---- 220 (489)
Q Consensus 145 ~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 220 (489)
.+|||++.+..... . ... .. ...+ ..........+..
T Consensus 133 ~~giP~v~~~~~~~------------------------~-~~~---~~-----~~~~------~~~~~~~~~~~~~~~~~ 173 (391)
T 3tsa_A 133 LLDLPVVLHRWGVD------------------------P-TAG---PF-----SDRA------HELLDPVCRHHGLTGLP 173 (391)
T ss_dssp HTTCCEEEECCSCC------------------------C-TTT---HH-----HHHH------HHHHHHHHHHTTSSSSC
T ss_pred HhCCCEEEEecCCc------------------------c-ccc---cc-----cchH------HHHHHHHHHHcCCCCCC
Confidence 99999887643211 0 000 00 0000 0001111111110
Q ss_pred -cceEEecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcC-
Q 011311 221 -TKGIIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGS- 298 (489)
Q Consensus 221 -~~gi~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~- 298 (489)
.+..+..+..+++.. .. ....++.++ |. .....+..|+...+++++|||++||...
T Consensus 174 ~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~-p~---------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~ 231 (391)
T 3tsa_A 174 TPELILDPCPPSLQAS-----DA-PQGAPVQYV-PY---------------NGSGAFPAWGAARTSARRVCICMGRMVLN 231 (391)
T ss_dssp CCSEEEECSCGGGSCT-----TS-CCCEECCCC-CC---------------CCCEECCGGGSSCCSSEEEEEECCHHHHH
T ss_pred CCceEEEecChhhcCC-----CC-CccCCeeee-cC---------------CCCcCCCchhhcCCCCCEEEEEcCCCCCc
Confidence 012222222222210 00 000001122 11 0111233577655567899999999742
Q ss_pred -CC-HHHHHHHHHHHhhc-CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcce
Q 011311 299 -FG-EEQIQEIASGLEKS-GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGG 375 (489)
Q Consensus 299 -~~-~~~~~~~~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~ 375 (489)
.. .+.+..++++ ++. +.++||..++.. . ..+. ..++|+.+.+|+|+.++|+++++
T Consensus 232 ~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~----------~----~~l~-----~~~~~v~~~~~~~~~~ll~~ad~-- 289 (391)
T 3tsa_A 232 ATGPAPLLRAVAAA-TELPGVEAVIAVPPEH----------R----ALLT-----DLPDNARIAESVPLNLFLRTCEL-- 289 (391)
T ss_dssp HHCSHHHHHHHHHH-HTSTTEEEEEECCGGG----------G----GGCT-----TCCTTEEECCSCCGGGTGGGCSE--
T ss_pred ccchHHHHHHHHHh-ccCCCeEEEEEECCcc----------h----hhcc-----cCCCCEEEeccCCHHHHHhhCCE--
Confidence 23 5667888888 777 889999887541 0 1111 22467888999999999999998
Q ss_pred EEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeee--ccccCCCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 376 FVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRL--DYRRGTENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 376 ~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~--~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
||||||.||++||+++|+|+|++|...||+.|+.++++. |+|+.+.. . ..+.+.|.++|.++++ |++++
T Consensus 290 ~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~-------~~~~~~l~~ai~~ll~-~~~~~ 360 (391)
T 3tsa_A 290 VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQA-------QSDHEQFTDSIATVLG-DTGFA 360 (391)
T ss_dssp EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSHHH-------HTCHHHHHHHHHHHHT-CTHHH
T ss_pred EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCcccc-------cCCHHHHHHHHHHHHc-CHHHH
Confidence 999999999999999999999999999999999998776 99999875 4 5899999999999999 78999
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 011311 454 KRVKEVSEKARLALRDGGSSYAATGRLI 481 (489)
Q Consensus 454 ~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 481 (489)
++++++++.+.+ .++..+.++.+.
T Consensus 361 ~~~~~~~~~~~~----~~~~~~~~~~i~ 384 (391)
T 3tsa_A 361 AAAIKLSDEITA----MPHPAALVRTLE 384 (391)
T ss_dssp HHHHHHHHHHHT----SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHH
Confidence 999988888654 345555555443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.97 E-value=4.8e-29 Score=252.24 Aligned_cols=358 Identities=15% Similarity=0.172 Sum_probs=228.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV 83 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l 83 (489)
+++|++++.++.||++|+++||++| +++| |+|+|+++. .+.+.+. ..|+++..+
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L--~~~G--------heV~v~~~~----------~~~~~~~------~~g~~~~~~ 73 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAA--RAAG--------HEVTFATGE----------GFAGTLR------KLGFEPVAT 73 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------HTTCEEEEC
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHH--HHCC--------CEEEEEccH----------HHHHHHH------hcCCceeec
Confidence 3569999999999999999999999 9999 669999875 2344444 457899888
Q ss_pred CCC-------------C---CCCC---CCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHH
Q 011311 84 PKM-------------N---PPPL---DYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTAN 144 (489)
Q Consensus 84 ~~~-------------~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~ 144 (489)
+.. . .+.. .........+.... ....+.. +.++++ ..+||+||+|....++..+|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-l~~~l~--~~~pDvVv~~~~~~~~~~aa~ 148 (412)
T 3otg_A 74 GMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVI--PQRVFDE-LQPVIE--RLRPDLVVQEISNYGAGLAAL 148 (412)
T ss_dssp CCCHHHHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHH--HHHHHHH-HHHHHH--HHCCSEEEEETTCHHHHHHHH
T ss_pred CcccccchhhhhhhhhcccCCccCChhHhhHHHHHHHhccc--hHHHHHH-HHHHHH--hcCCCEEEECchhhHHHHHHH
Confidence 741 0 0000 00011111111110 1111122 223333 248999999987777888899
Q ss_pred HhCCCeEEEechhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHh-------
Q 011311 145 ELGVPSYVFFTSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRR------- 217 (489)
Q Consensus 145 ~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 217 (489)
.+|||++........ .++....+ ...+.+....
T Consensus 149 ~~giP~v~~~~~~~~-------------------------~~~~~~~~---------------~~~~~~~~~~~g~~~~~ 188 (412)
T 3otg_A 149 KAGIPTICHGVGRDT-------------------------PDDLTRSI---------------EEEVRGLAQRLGLDLPP 188 (412)
T ss_dssp HHTCCEEEECCSCCC-------------------------CSHHHHHH---------------HHHHHHHHHHTTCCCCS
T ss_pred HcCCCEEEecccccC-------------------------chhhhHHH---------------HHHHHHHHHHcCCCCCc
Confidence 999998875432110 00000000 0000000011
Q ss_pred ---hhccceEEecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHh-hhcCCCCceEEEee
Q 011311 218 ---FKETKGIIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRW-LDDQPASSVVFLCF 293 (489)
Q Consensus 218 ---~~~~~gi~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vV~vs~ 293 (489)
....+.++..+-..++.... . .......+-+..... ..+..+| ....+++++||+++
T Consensus 189 ~~~~~~~d~~i~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~vlv~~ 249 (412)
T 3otg_A 189 GRIDGFGNPFIDIFPPSLQEPEF-R-----ARPRRHELRPVPFAE-------------QGDLPAWLSSRDTARPLVYLTL 249 (412)
T ss_dssp SCCGGGGCCEEECSCGGGSCHHH-H-----TCTTEEECCCCCCCC-------------CCCCCGGGGGSCTTSCEEEEEC
T ss_pred ccccCCCCeEEeeCCHHhcCCcc-c-----CCCCcceeeccCCCC-------------CCCCCCccccccCCCCEEEEEc
Confidence 01222333333333332110 0 111111111111110 1112345 23234568999999
Q ss_pred cCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCc
Q 011311 294 GSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAI 373 (489)
Q Consensus 294 GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~ 373 (489)
||......+.+.++++++.+.+.+++|..++.... +. +. ..++|+.+.+|+|+.++|+++++
T Consensus 250 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~---------~~----l~-----~~~~~v~~~~~~~~~~~l~~ad~ 311 (412)
T 3otg_A 250 GTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDV---------SG----LG-----EVPANVRLESWVPQAALLPHVDL 311 (412)
T ss_dssp TTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCC---------TT----CC-----CCCTTEEEESCCCHHHHGGGCSE
T ss_pred CCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCCh---------hh----hc-----cCCCcEEEeCCCCHHHHHhcCcE
Confidence 99875566778899999999999999998865210 11 11 12367788899999999999998
Q ss_pred ceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 374 GGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 374 ~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
||+|||+||++||+++|+|+|++|...||..|+..+++. |.|+.+... .+++++|+++|.++++ |++++
T Consensus 312 --~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~~-------~~~~~~l~~ai~~ll~-~~~~~ 380 (412)
T 3otg_A 312 --VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLPD-------NISPDSVSGAAKRLLA-EESYR 380 (412)
T ss_dssp --EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCGG-------GCCHHHHHHHHHHHHH-CHHHH
T ss_pred --EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCcc-------cCCHHHHHHHHHHHHh-CHHHH
Confidence 999999999999999999999999999999999998877 999998765 7899999999999999 78999
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011311 454 KRVKEVSEKARLALRDGGSSYAATGRLIEDL 484 (489)
Q Consensus 454 ~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 484 (489)
+++.+.++.+.+. .+..+.++.+.+-+
T Consensus 381 ~~~~~~~~~~~~~----~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 381 AGARAVAAEIAAM----PGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHS----CCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHhcC----CCHHHHHHHHHHHh
Confidence 9988888886653 45555555554443
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.8e-27 Score=210.47 Aligned_cols=165 Identities=26% Similarity=0.463 Sum_probs=138.0
Q ss_pred CCChhHHHHhhhcCCCCceEEEeecCCc-CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhh
Q 011311 270 GTQRDEIIRWLDDQPASSVVFLCFGSMG-SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGF 348 (489)
Q Consensus 270 ~~~~~~l~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~ 348 (489)
+++++++.+|++..+++++|||++||+. ....+.+..++++|.+.+.+++|+.++.. ++
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------------------~~-- 64 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK------------------PD-- 64 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC------------------CT--
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC------------------cc--
Confidence 4578899999987766789999999986 44667788999999999999999987641 01
Q ss_pred HhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 349 QERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 349 ~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
..++|+.+.+|+||.++|.|+++.+||||||+||++|++++|+|+|++|...||+.||+++++. |+|+.++..
T Consensus 65 --~~~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~---- 137 (170)
T 2o6l_A 65 --TLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFN---- 137 (170)
T ss_dssp --TCCTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTT----
T ss_pred --cCCCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccc----
Confidence 1235778899999999996555555999999999999999999999999999999999998776 999998754
Q ss_pred CCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011311 429 TENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARL 465 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~ 465 (489)
.++.++|.++|+++++ +++||+|++++++++++
T Consensus 138 ---~~~~~~l~~~i~~ll~-~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 138 ---TMSSTDLLNALKRVIN-DPSYKENVMKLSRIQHD 170 (170)
T ss_dssp ---TCCHHHHHHHHHHHHH-CHHHHHHHHHHC-----
T ss_pred ---cCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHhhC
Confidence 7899999999999998 78999999999998764
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=1.1e-26 Score=230.92 Aligned_cols=334 Identities=13% Similarity=0.083 Sum_probs=195.7
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|+ .+|+|...++-||++|.++||++| .++| |+|+|+++... .. .+.+. ..|+.|
T Consensus 1 M~--~~i~i~~GGTgGHi~palala~~L--~~~g--------~~V~~vg~~~g------~e--~~~v~------~~g~~~ 54 (365)
T 3s2u_A 1 MK--GNVLIMAGGTGGHVFPALACAREF--QARG--------YAVHWLGTPRG------IE--NDLVP------KAGLPL 54 (365)
T ss_dssp ----CEEEEECCSSHHHHHHHHHHHHHH--HHTT--------CEEEEEECSSS------TH--HHHTG------GGTCCE
T ss_pred CC--CcEEEEcCCCHHHHHHHHHHHHHH--HhCC--------CEEEEEECCch------Hh--hchhh------hcCCcE
Confidence 55 689999988889999999999999 9999 66999986532 00 11222 457888
Q ss_pred EEcCCCCCCCC---CCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCc--hHHHHHHHhCCCeEEEec
Q 011311 81 IGVPKMNPPPL---DYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCS--SMIDTANELGVPSYVFFT 155 (489)
Q Consensus 81 ~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~--~~~~vA~~lgiP~v~~~~ 155 (489)
+.++....... .....+..++..+. .....+.+ .+||+||++..+. .+..+|+.+|||+++..
T Consensus 55 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe- 122 (365)
T 3s2u_A 55 HLIQVSGLRGKGLKSLVKAPLELLKSLF-----QALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHE- 122 (365)
T ss_dssp EECC--------------CHHHHHHHHH-----HHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEE-
T ss_pred EEEECCCcCCCCHHHHHHHHHHHHHHHH-----HHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEe-
Confidence 88874321111 11122222221111 11122332 4899999875443 45677899999987642
Q ss_pred hhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHhhHH
Q 011311 156 SGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESH 235 (489)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l~~~ 235 (489)
+ ..+||+.+. +. . +.... +..++++..
T Consensus 123 ~--------------------------n~~~G~~nr-------------------~l---~--~~a~~-v~~~~~~~~-- 149 (365)
T 3s2u_A 123 Q--------------------------NAVAGTANR-------------------SL---A--PIARR-VCEAFPDTF-- 149 (365)
T ss_dssp C--------------------------SSSCCHHHH-------------------HH---G--GGCSE-EEESSTTSS--
T ss_pred c--------------------------chhhhhHHH-------------------hh---c--cccce-eeecccccc--
Confidence 1 123333210 00 0 01111 222332211
Q ss_pred HHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhh--
Q 011311 236 AVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEK-- 313 (489)
Q Consensus 236 ~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~-- 313 (489)
....+.+++|+.+...... .. . .+....+++++|+|..||....... ..+.+++..
T Consensus 150 --------~~~~k~~~~g~pvr~~~~~---------~~-~--~~~~~~~~~~~ilv~gGs~g~~~~~--~~~~~al~~l~ 207 (365)
T 3s2u_A 150 --------PASDKRLTTGNPVRGELFL---------DA-H--ARAPLTGRRVNLLVLGGSLGAEPLN--KLLPEALAQVP 207 (365)
T ss_dssp --------CC---CEECCCCCCGGGCC---------CT-T--SSCCCTTSCCEEEECCTTTTCSHHH--HHHHHHHHTSC
T ss_pred --------cCcCcEEEECCCCchhhcc---------ch-h--hhcccCCCCcEEEEECCcCCccccc--hhhHHHHHhcc
Confidence 0123466777543322110 00 0 0111123457899999997654332 234445443
Q ss_pred --cCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHH-HHhccCCcceEEecCCchhHHHHHH
Q 011311 314 --SGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQK-EVLAHSAIGGFVSHCGWNSILESVW 390 (489)
Q Consensus 314 --~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~-~iL~~~~~~~~i~HgG~~s~~eal~ 390 (489)
.+..++|.+|... ++. +. ......+.++.+.+|+++. ++|+.+++ +|||+|.+|+.|+++
T Consensus 208 ~~~~~~vi~~~G~~~----------~~~----~~-~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a 270 (365)
T 3s2u_A 208 LEIRPAIRHQAGRQH----------AEI----TA-ERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTA 270 (365)
T ss_dssp TTTCCEEEEECCTTT----------HHH----HH-HHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHH
T ss_pred cccceEEEEecCccc----------ccc----cc-ceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHH
Confidence 3567788877541 111 11 1112334577788999986 69999999 999999999999999
Q ss_pred hCCcEEeccCc----chhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011311 391 FGVPIVTWPIY----AEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLA 466 (489)
Q Consensus 391 ~GvP~v~~P~~----~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~ 466 (489)
+|+|+|.+|+. .+|..||+.+++. |+|+.+..+ ++|+++|.++|.++++ |++.+++ |++.+++.
T Consensus 271 ~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~~-------~~~~~~L~~~i~~ll~-d~~~~~~---m~~~a~~~ 338 (365)
T 3s2u_A 271 AGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQK-------STGAAELAAQLSEVLM-HPETLRS---MADQARSL 338 (365)
T ss_dssp HTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCTT-------TCCHHHHHHHHHHHHH-CTHHHHH---HHHHHHHT
T ss_pred hCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeecC-------CCCHHHHHHHHHHHHC-CHHHHHH---HHHHHHhc
Confidence 99999999974 6899999999887 999998754 8899999999999998 5544433 44444432
Q ss_pred HhcCCChHHHH
Q 011311 467 LRDGGSSYAAT 477 (489)
Q Consensus 467 ~~~~g~~~~~~ 477 (489)
....++.+.+
T Consensus 339 -~~~~aa~~ia 348 (365)
T 3s2u_A 339 -AKPEATRTVV 348 (365)
T ss_dssp -CCTTHHHHHH
T ss_pred -CCccHHHHHH
Confidence 3334444333
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.79 E-value=3.5e-17 Score=162.10 Aligned_cols=340 Identities=14% Similarity=0.084 Sum_probs=195.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVP 84 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~ 84 (489)
++|++++.+.-||..+++.|+++| .++| |+|++++.... ...+.+. ..++++..++
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L--~~~G--------~~V~v~~~~~~--------~~~~~~~------~~g~~~~~~~ 62 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHL--MAQG--------WQVRWLGTADR--------MEADLVP------KHGIEIDFIR 62 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHH--HTTT--------CEEEEEECTTS--------THHHHGG------GGTCEEEECC
T ss_pred cEEEEEeCCCccchhHHHHHHHHH--HHcC--------CEEEEEecCCc--------chhhhcc------ccCCceEEec
Confidence 589999988889999999999999 9999 66999987532 1112222 2467777776
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCC--chHHHHHHHhCCCeEEEechhHHHHH
Q 011311 85 KMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFC--SSMIDTANELGVPSYVFFTSGAAFLG 162 (489)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~--~~~~~vA~~lgiP~v~~~~~~~~~~~ 162 (489)
...... ......+....... ..+.. +.++++ ..+||+|+++... ..+..++..+|+|+++.....
T Consensus 63 ~~~~~~----~~~~~~~~~~~~~~-~~~~~-l~~~l~--~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~----- 129 (364)
T 1f0k_A 63 ISGLRG----KGIKALIAAPLRIF-NAWRQ-ARAIMK--AYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG----- 129 (364)
T ss_dssp CCCCTT----CCHHHHHTCHHHHH-HHHHH-HHHHHH--HHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-----
T ss_pred CCccCc----CccHHHHHHHHHHH-HHHHH-HHHHHH--hcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-----
Confidence 432111 11111111111110 11112 222222 2389999987643 245667888999987542110
Q ss_pred HHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHhhHHHHHHHhh
Q 011311 163 FVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAVEYLMK 242 (489)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~~~~~~ 242 (489)
.+++ ... ...+..+.+++.+ .+.
T Consensus 130 ----------------------~~~~-------------------~~~-----~~~~~~d~v~~~~-~~~---------- 152 (364)
T 1f0k_A 130 ----------------------IAGL-------------------TNK-----WLAKIATKVMQAF-PGA---------- 152 (364)
T ss_dssp ----------------------SCCH-------------------HHH-----HHTTTCSEEEESS-TTS----------
T ss_pred ----------------------CCcH-------------------HHH-----HHHHhCCEEEecC-hhh----------
Confidence 0110 000 0112233444332 111
Q ss_pred cCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhc--CCeEEE
Q 011311 243 CDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKS--GVRFLW 320 (489)
Q Consensus 243 ~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~--~~~~vw 320 (489)
.+++..+|.-+..... .... . ...+...+++++|++..|+... ......+++++... +.++++
T Consensus 153 ---~~~~~~i~n~v~~~~~--------~~~~-~-~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~ 217 (364)
T 1f0k_A 153 ---FPNAEVVGNPVRTDVL--------ALPL-P-QQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWH 217 (364)
T ss_dssp ---SSSCEECCCCCCHHHH--------TSCC-H-HHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEE
T ss_pred ---cCCceEeCCccchhhc--------ccch-h-hhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEE
Confidence 1235566633221110 0001 1 1122222344677777788642 33344455665543 567777
Q ss_pred EecCCCCCCCCCCCCCcccccccCChhhHhhhc-CCCccccccCH-HHHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 321 SLRKTPPKDRPEMPGEYTCVEDILPRGFQERSK-GRGMICGWAPQ-KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~v~~w~pq-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
..|... .+. +.+ ...+.. +++.+.+|+++ ..+|+.+++ ||+++|.++++||+++|+|+|+.
T Consensus 218 i~G~~~----------~~~----l~~-~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~ 280 (364)
T 1f0k_A 218 QSGKGS----------QQS----VEQ-AYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFV 280 (364)
T ss_dssp ECCTTC----------HHH----HHH-HHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred EcCCch----------HHH----HHH-HHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEe
Confidence 777641 011 111 111111 46788899954 679999999 99999999999999999999999
Q ss_pred cCc---chhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHH
Q 011311 399 PIY---AEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYA 475 (489)
Q Consensus 399 P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 475 (489)
|.. .||..|++.+++. |.|+.++.. +.+.++++++|.++ + ++.+++..+.+ ++. .+..+...
T Consensus 281 ~~~g~~~~q~~~~~~~~~~-g~g~~~~~~-------d~~~~~la~~i~~l-~--~~~~~~~~~~~---~~~-~~~~~~~~ 345 (364)
T 1f0k_A 281 PFQHKDRQQYWNALPLEKA-GAAKIIEQP-------QLSVDAVANTLAGW-S--RETLLTMAERA---RAA-SIPDATER 345 (364)
T ss_dssp CCCCTTCHHHHHHHHHHHT-TSEEECCGG-------GCCHHHHHHHHHTC-C--HHHHHHHHHHH---HHT-CCTTHHHH
T ss_pred eCCCCchhHHHHHHHHHhC-CcEEEeccc-------cCCHHHHHHHHHhc-C--HHHHHHHHHHH---HHh-hccCHHHH
Confidence 987 7999999998887 999988754 67799999999888 3 55555443333 332 23444444
Q ss_pred HHHHHHHHHh
Q 011311 476 ATGRLIEDLF 485 (489)
Q Consensus 476 ~~~~~~~~~~ 485 (489)
.++++.+...
T Consensus 346 ~~~~~~~~y~ 355 (364)
T 1f0k_A 346 VANEVSRVAR 355 (364)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 5555544433
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=2.7e-15 Score=136.16 Aligned_cols=142 Identities=18% Similarity=0.248 Sum_probs=95.2
Q ss_pred hcCCCCceEEEeecCCcCCCHHHHHH-----HHHHHhhcC-CeEEEEecCCCCCCCCCCCCCccccc-cc--------CC
Q 011311 281 DDQPASSVVFLCFGSMGSFGEEQIQE-----IASGLEKSG-VRFLWSLRKTPPKDRPEMPGEYTCVE-DI--------LP 345 (489)
Q Consensus 281 ~~~~~~~vV~vs~GS~~~~~~~~~~~-----~~~al~~~~-~~~vw~~~~~~~~~~~~~~~~~~~~~-~~--------lp 345 (489)
...+++++|||+.||...+ .+.+.. ++++|.+.+ .++||.+|..... ..+... .. +|
T Consensus 23 ~~~~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p 94 (224)
T 2jzc_A 23 EGIIEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIP 94 (224)
T ss_dssp -CCCCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCS
T ss_pred CCCCCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhccccccccc
Confidence 3334568999999997422 222333 348888877 7999999976210 000000 00 12
Q ss_pred hhh-------H----hhhcCCCccccccCHH-HHhc-cCCcceEEecCCchhHHHHHHhCCcEEeccCc----chhhHHH
Q 011311 346 RGF-------Q----ERSKGRGMICGWAPQK-EVLA-HSAIGGFVSHCGWNSILESVWFGVPIVTWPIY----AEQQINA 408 (489)
Q Consensus 346 ~~~-------~----~~~~~~~~v~~w~pq~-~iL~-~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~----~DQ~~na 408 (489)
.+. . ....-++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA 172 (224)
T 2jzc_A 95 IDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIA 172 (224)
T ss_dssp SCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHH
T ss_pred cccccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHH
Confidence 100 0 0000123455888876 7999 9999 99999999999999999999999984 4799999
Q ss_pred HHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHH
Q 011311 409 FQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCV 445 (489)
Q Consensus 409 ~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~v 445 (489)
+++++. |+++.+ +.++|.++|+++
T Consensus 173 ~~l~~~-G~~~~~------------~~~~L~~~i~~l 196 (224)
T 2jzc_A 173 DKFVEL-GYVWSC------------APTETGLIAGLR 196 (224)
T ss_dssp HHHHHH-SCCCEE------------CSCTTTHHHHHH
T ss_pred HHHHHC-CCEEEc------------CHHHHHHHHHHH
Confidence 999887 998643 446677777766
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.42 E-value=8.7e-12 Score=117.77 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=87.0
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhh--hcCCCccccccC
Q 011311 286 SSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQER--SKGRGMICGWAP 363 (489)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~v~~w~p 363 (489)
.+.|+|++|... ..+....++++|.+.. ++.+++|.... ++ +.+... ..+|+.+..|++
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~~--------~~--------~~l~~~~~~~~~v~v~~~~~ 217 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSNP--------NL--------KKLQKFAKLHNNIRLFIDHE 217 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTCT--------TH--------HHHHHHHHTCSSEEEEESCS
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCch--------HH--------HHHHHHHhhCCCEEEEeCHH
Confidence 467999998743 2335567888887654 56677765520 11 122111 124778889998
Q ss_pred HH-HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeee
Q 011311 364 QK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRL 423 (489)
Q Consensus 364 q~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 423 (489)
+. +++..+++ +||+|| +|+.|+++.|+|+|++|+..+|..||+.+++. |+++.+..
T Consensus 218 ~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 218 NIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp CHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 87 59999999 999999 89999999999999999999999999999887 99998763
No 25
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.12 E-value=2.7e-09 Score=105.85 Aligned_cols=158 Identities=13% Similarity=0.163 Sum_probs=95.6
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHhh-----cCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhh--hcCCCc
Q 011311 285 ASSVVFLCFGSMGSFGEEQIQEIASGLEK-----SGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQER--SKGRGM 357 (489)
Q Consensus 285 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~ 357 (489)
++++|+++.|....... .+..+++++.. .+.++++..+... . +-+.+.+. ..+++.
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~------------~----~~~~l~~~~~~~~~v~ 266 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNP------------N----VREPVNRILGHVKNVI 266 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCH------------H----HHHHHHHHHTTCTTEE
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCH------------H----HHHHHHHHhhcCCCEE
Confidence 35678888887653322 34445555443 2456666444220 0 00111111 125777
Q ss_pred cccccCH---HHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccC
Q 011311 358 ICGWAPQ---KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVM 434 (489)
Q Consensus 358 v~~w~pq---~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~ 434 (489)
+.+++++ .++|+.+++ ||+.+|. .++||+++|+|+|+.+..+++.. +++. |.|+.++ . +
T Consensus 267 ~~g~~~~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~---------~-d 328 (384)
T 1vgv_A 267 LIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVG---------T-D 328 (384)
T ss_dssp EECCCCHHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEEC---------S-S
T ss_pred EeCCCCHHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeC---------C-C
Confidence 7677765 458999999 9998854 48899999999999997555433 4566 8887764 3 8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 435 ADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 435 ~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
.++|+++|.++++ |++.+++ +++..++. .+..+..+.++.+.+
T Consensus 329 ~~~la~~i~~ll~-d~~~~~~---~~~~~~~~-~~~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 329 KQRIVEEVTRLLK-DENEYQA---MSRAHNPY-GDGQACSRILEALKN 371 (384)
T ss_dssp HHHHHHHHHHHHH-CHHHHHH---HHSSCCTT-CCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ChHHHhh---hhhccCCC-cCCCHHHHHHHHHHH
Confidence 8999999999998 6644433 22222222 334455555554444
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.10 E-value=1.6e-07 Score=93.19 Aligned_cols=320 Identities=14% Similarity=0.113 Sum_probs=167.4
Q ss_pred CCCCcEEEEEcC--C--CccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCC
Q 011311 1 MKEKAELVFIPS--P--SVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADV 76 (489)
Q Consensus 1 M~~~~~i~~~~~--~--~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (489)
|+++++|++++. + .-|.-.-+..|++.| . | | +|++++.... . ....... ...
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~--g------~--~v~v~~~~~~-----~--~~~~~~~-----~~~ 56 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D--P------E--SIVVFASTQN-----A--EEAHAYD-----KTL 56 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C--G------G--GEEEEEECSS-----H--HHHHHHH-----TTC
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--c--C------C--eEEEEECCCC-----c--cchhhhc-----ccc
Confidence 555677999875 3 467778888888888 4 8 4 4999987633 1 1012221 134
Q ss_pred CeEEEEcCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCc--hHHHHHHHhCCCeEEEe
Q 011311 77 SIRFIGVPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCS--SMIDTANELGVPSYVFF 154 (489)
Q Consensus 77 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~--~~~~vA~~lgiP~v~~~ 154 (489)
++.+..++..... ... .. ...+.++++ ..++|+|++..... +...++..+++|.+++.
T Consensus 57 ~~~~~~~~~~~~~-----~~~-~~------------~~~l~~~~~--~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~ 116 (394)
T 3okp_A 57 DYEVIRWPRSVML-----PTP-TT------------AHAMAEIIR--EREIDNVWFGAAAPLALMAGTAKQAGASKVIAS 116 (394)
T ss_dssp SSEEEEESSSSCC-----SCH-HH------------HHHHHHHHH--HTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEE
T ss_pred ceEEEEccccccc-----cch-hh------------HHHHHHHHH--hcCCCEEEECCcchHHHHHHHHHhcCCCcEEEE
Confidence 6777777643211 111 10 011223333 24899999754333 45667889999955533
Q ss_pred chhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHH-HHhhhccceEEecchhHhh
Q 011311 155 TSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENF-GRRFKETKGIIVNTFEELE 233 (489)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gi~~~s~~~l~ 233 (489)
...... .+. . ....... ...++..+.++..|-...+
T Consensus 117 ~h~~~~--------------------------~~~-~----------------~~~~~~~~~~~~~~~d~ii~~s~~~~~ 153 (394)
T 3okp_A 117 THGHEV--------------------------GWS-M----------------LPGSRQSLRKIGTEVDVLTYISQYTLR 153 (394)
T ss_dssp CCSTHH--------------------------HHT-T----------------SHHHHHHHHHHHHHCSEEEESCHHHHH
T ss_pred eccchh--------------------------hhh-h----------------cchhhHHHHHHHHhCCEEEEcCHHHHH
Confidence 221100 000 0 0011111 1234566777776643322
Q ss_pred HHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCC-Ch---hHHHHhhhcCCCCceEEEeecCCc-CCCHHHHHHHH
Q 011311 234 SHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGT-QR---DEIIRWLDDQPASSVVFLCFGSMG-SFGEEQIQEIA 308 (489)
Q Consensus 234 ~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~-~~---~~l~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~ 308 (489)
. ...... ...++..+..-+..... .+ .+ .++.+.+.- +++..+++..|++. ....+.+.+.+
T Consensus 154 ~-~~~~~~---~~~~~~vi~ngv~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~ 220 (394)
T 3okp_A 154 R-FKSAFG---SHPTFEHLPSGVDVKRF--------TPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAM 220 (394)
T ss_dssp H-HHHHHC---SSSEEEECCCCBCTTTS--------CCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHH
T ss_pred H-HHHhcC---CCCCeEEecCCcCHHHc--------CCCCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHH
Confidence 1 111111 11245555533322210 11 22 223333322 23346677788864 33344444444
Q ss_pred HHHhhc--CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHH---HhccCCcceEEe-----
Q 011311 309 SGLEKS--GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKE---VLAHSAIGGFVS----- 378 (489)
Q Consensus 309 ~al~~~--~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~---iL~~~~~~~~i~----- 378 (489)
..+.+. +.++++. |... ..+.+.... ....+++.+.+|+|+.+ +|..+++ +|.
T Consensus 221 ~~l~~~~~~~~l~i~-G~g~---------~~~~l~~~~-----~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~ 283 (394)
T 3okp_A 221 PQVIAARPDAQLLIV-GSGR---------YESTLRRLA-----TDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTR 283 (394)
T ss_dssp HHHHHHSTTCEEEEE-CCCT---------THHHHHHHT-----GGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCB
T ss_pred HHHHhhCCCeEEEEE-cCch---------HHHHHHHHH-----hcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccc
Confidence 444332 5565554 4321 111111111 22346778889998655 7889998 665
Q ss_pred ------cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHH
Q 011311 379 ------HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEV 452 (489)
Q Consensus 379 ------HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 452 (489)
-|.-+++.||+++|+|+|+.+..+-+. +++. |.|+.++ .-+.++++++|.++++ ++..
T Consensus 284 ~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e-----~i~~-~~g~~~~---------~~d~~~l~~~i~~l~~-~~~~ 347 (394)
T 3okp_A 284 GGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPE-----TVTP-ATGLVVE---------GSDVDKLSELLIELLD-DPIR 347 (394)
T ss_dssp GGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGG-----GCCT-TTEEECC---------TTCHHHHHHHHHHHHT-CHHH
T ss_pred cccccccccCcHHHHHHHcCCCEEEeCCCChHH-----HHhc-CCceEeC---------CCCHHHHHHHHHHHHh-CHHH
Confidence 555678999999999999977643221 2344 5777665 3379999999999998 6544
Q ss_pred H
Q 011311 453 R 453 (489)
Q Consensus 453 ~ 453 (489)
+
T Consensus 348 ~ 348 (394)
T 3okp_A 348 R 348 (394)
T ss_dssp H
T ss_pred H
Confidence 3
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.06 E-value=1.3e-07 Score=95.36 Aligned_cols=83 Identities=14% Similarity=0.073 Sum_probs=60.5
Q ss_pred cCCCccccccCHH---HHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 353 KGRGMICGWAPQK---EVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 353 ~~~~~v~~w~pq~---~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
.+++.+.+|+|+. .+|..+++ +|.- |..++++||+++|+|+|+.+.. .....+ +.-+.|+.++
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~e~i-~~~~~g~~~~--- 374 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARVG----GLPIAV-AEGETGLLVD--- 374 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESCT----THHHHS-CBTTTEEEES---
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCCC----ChhHHh-hCCCcEEECC---
Confidence 3678888999874 58899998 6654 3356899999999999997653 233333 3325787765
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCHHH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDSEV 452 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~~~ 452 (489)
.-+.++++++|.++++ +++.
T Consensus 375 ------~~d~~~la~~i~~l~~-~~~~ 394 (438)
T 3c48_A 375 ------GHSPHAWADALATLLD-DDET 394 (438)
T ss_dssp ------SCCHHHHHHHHHHHHH-CHHH
T ss_pred ------CCCHHHHHHHHHHHHc-CHHH
Confidence 3478999999999998 5533
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.04 E-value=2.1e-08 Score=99.16 Aligned_cols=107 Identities=15% Similarity=0.171 Sum_probs=73.9
Q ss_pred CCCccccccCH---HHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 354 GRGMICGWAPQ---KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 354 ~~~~v~~w~pq---~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
+++.+.+++++ ..+|+.+++ ||+.+| |.+.||+++|+|+|+.+..++++. +++. |.|+.++
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~-------- 318 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG-------- 318 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC--------
T ss_pred CCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC--------
Confidence 56777766665 479999998 999884 445699999999999987777666 2455 8887653
Q ss_pred CccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 011311 431 NHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIED 483 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 483 (489)
.+.++|+++|.++++ |++.+++..+ .. +...+++++.+.++.+.+.
T Consensus 319 --~d~~~la~~i~~ll~-d~~~~~~~~~---~~-~~~~~~~~~~~i~~~i~~~ 364 (376)
T 1v4v_A 319 --TDPEGVYRVVKGLLE-NPEELSRMRK---AK-NPYGDGKAGLMVARGVAWR 364 (376)
T ss_dssp --SCHHHHHHHHHHHHT-CHHHHHHHHH---SC-CSSCCSCHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHh-ChHhhhhhcc---cC-CCCCCChHHHHHHHHHHHH
Confidence 378999999999998 6654444332 11 2234455665555554443
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.00 E-value=9.8e-09 Score=102.70 Aligned_cols=109 Identities=15% Similarity=0.130 Sum_probs=78.8
Q ss_pred CCCccccccCH---HHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 354 GRGMICGWAPQ---KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 354 ~~~~v~~w~pq---~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
+++.+.+++++ ..+++++++ +|+-.|. .+.||.++|+|+|+.|-.++++. +++. |.|+.+.
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~-------- 345 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG-------- 345 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC--------
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC--------
Confidence 57778888874 358889998 9988753 23699999999999976666654 2466 8887653
Q ss_pred CccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 431 NHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
.++++|.+++.++++ ++..+++.. +..+. .++++++.+.++.+.+.+.
T Consensus 346 --~d~~~l~~ai~~ll~-~~~~~~~m~---~~~~~-~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 346 --TNKENLIKEALDLLD-NKESHDKMA---QAANP-YGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp --SCHHHHHHHHHHHHH-CHHHHHHHH---HSCCT-TCCSCHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHHc-CHHHHHHHH---hhcCc-ccCCcHHHHHHHHHHHHhC
Confidence 389999999999998 665554433 22222 4678888888777766654
No 30
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.95 E-value=2.6e-07 Score=91.05 Aligned_cols=106 Identities=17% Similarity=0.194 Sum_probs=71.4
Q ss_pred CCCccccccCHH---HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 354 GRGMICGWAPQK---EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 354 ~~~~v~~w~pq~---~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
+++.+.+++++. .+|+.+++ ||+..| +.++||+++|+|+|+....+..+ .+++. |.|+.++
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~-g~g~~v~-------- 326 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEA-GTLKLAG-------- 326 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHT-TSEEECC--------
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecC-CceEEcC--------
Confidence 577777777754 58899998 998874 55889999999999986544432 23566 8887663
Q ss_pred CccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 431 NHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
. +.++|+++|.++++ |++.+++ +++..++. .++.+..+.++.+.+
T Consensus 327 -~-d~~~la~~i~~ll~-~~~~~~~---~~~~~~~~-~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 327 -T-DEETIFSLADELLS-DKEAHDK---MSKASNPY-GDGRASERIVEAILK 371 (375)
T ss_dssp -S-CHHHHHHHHHHHHH-CHHHHHH---HCCCCCTT-CCSCHHHHHHHHHHH
T ss_pred -C-CHHHHHHHHHHHHh-ChHhHhh---hhhcCCCC-CCCcHHHHHHHHHHH
Confidence 3 78999999999998 6654443 33222322 234454555554444
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.91 E-value=7.9e-08 Score=95.90 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=72.8
Q ss_pred CCCccccccCH---HHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 354 GRGMICGWAPQ---KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 354 ~~~~v~~w~pq---~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
+++.+.+++++ ..+++.+++ ||+-.| |.+.||.++|+|+|+..-..+++. +++. |.++.+.
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~-------- 351 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVG-------- 351 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECT--------
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcC--------
Confidence 56777777753 468899998 999988 666799999999999865555532 3566 8875542
Q ss_pred CccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 011311 431 NHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRL 480 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 480 (489)
.++++|.+++.++++ +++.+++..+ ..+. .++++++.+.++.+
T Consensus 352 --~d~~~l~~ai~~ll~-d~~~~~~m~~---~~~~-~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 352 --TNQQQICDALSLLLT-DPQAYQAMSQ---AHNP-YGDGKACQRIADIL 394 (396)
T ss_dssp --TCHHHHHHHHHHHHH-CHHHHHHHHT---SCCT-TCCSCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHc-CHHHHHHHhh---ccCC-CcCChHHHHHHHHH
Confidence 268999999999998 6655544332 2222 46677766655543
No 32
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.90 E-value=2.7e-06 Score=85.47 Aligned_cols=130 Identities=15% Similarity=0.171 Sum_probs=79.4
Q ss_pred eEEEeecCCc--CCCHHHHHHHHHHHhh----cCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccc
Q 011311 288 VVFLCFGSMG--SFGEEQIQEIASGLEK----SGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGW 361 (489)
Q Consensus 288 vV~vs~GS~~--~~~~~~~~~~~~al~~----~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w 361 (489)
.+++..|++. ....+.+.+.+..+.+ .+.++++ +|... ..+ ...+ .....+.++++.+.+|
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i-~G~g~--------~~~---~~~l-~~~~~~~~~~~~~~g~ 318 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFII-IGKGD--------PEL---EGWA-RSLEEKHGNVKVITEM 318 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEE-ECCCC--------HHH---HHHH-HHHHHHCTTEEEECSC
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEE-EcCCC--------hhH---HHHH-HHHHhhcCCEEEEcCC
Confidence 6777788865 3344555555555554 3455544 34321 000 0001 1111222344445688
Q ss_pred cCHHH---HhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccC
Q 011311 362 APQKE---VLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVM 434 (489)
Q Consensus 362 ~pq~~---iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~ 434 (489)
+++.+ +|..+++ +|.- |--++++||+++|+|+|+-... ... .+++. |.|..++ .-+
T Consensus 319 ~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~----~~~-e~~~~-~~g~~~~---------~~d 381 (439)
T 3fro_A 319 LSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLR-DIITN-ETGILVK---------AGD 381 (439)
T ss_dssp CCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESST----HHH-HHCCT-TTCEEEC---------TTC
T ss_pred CCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCCC----Ccc-eeEEc-CceEEeC---------CCC
Confidence 99864 7889998 6632 3347999999999999997543 333 33445 7887775 348
Q ss_pred HHHHHHHHHHHhc
Q 011311 435 ADELARAVGCVMD 447 (489)
Q Consensus 435 ~~~l~~ai~~vl~ 447 (489)
.++++++|.++++
T Consensus 382 ~~~la~~i~~ll~ 394 (439)
T 3fro_A 382 PGELANAILKALE 394 (439)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999997
No 33
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.86 E-value=5.7e-06 Score=82.07 Aligned_cols=83 Identities=17% Similarity=0.107 Sum_probs=59.1
Q ss_pred CCCccccccCH-HHHhccCCcceEE----ecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQ-KEVLAHSAIGGFV----SHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq-~~iL~~~~~~~~i----~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+.++..+ ..+|..+++ +| .-|..+++.||+++|+|+|+.+..+ .... ++.-+.|+.++
T Consensus 267 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~-v~~~~~g~~~~------ 333 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEV-IQHGDTGYLCE------ 333 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTT-CCBTTTEEEEC------
T ss_pred CeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHH-hhcCCceEEeC------
Confidence 56677776554 469999998 77 4566779999999999999987642 1212 22225677665
Q ss_pred CCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 429 TENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
.-+.++++++|.++++ +++.+
T Consensus 334 ---~~d~~~la~~i~~l~~-~~~~~ 354 (394)
T 2jjm_A 334 ---VGDTTGVADQAIQLLK-DEELH 354 (394)
T ss_dssp ---TTCHHHHHHHHHHHHH-CHHHH
T ss_pred ---CCCHHHHHHHHHHHHc-CHHHH
Confidence 3378999999999998 65443
No 34
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.77 E-value=2.6e-06 Score=84.68 Aligned_cols=85 Identities=13% Similarity=0.169 Sum_probs=62.1
Q ss_pred cCCCccccccCHH---HHhccCCcceEEec----CCc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeec
Q 011311 353 KGRGMICGWAPQK---EVLAHSAIGGFVSH----CGW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLD 424 (489)
Q Consensus 353 ~~~~~v~~w~pq~---~iL~~~~~~~~i~H----gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 424 (489)
.+++.+.+|+++. .+|..+++ +|.- -|+ +++.||+++|+|+|+.+. ......+.+. +.|+.++
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~-- 332 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVP-- 332 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECC--
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeC--
Confidence 4677888999975 68999999 6633 343 489999999999999876 3344444333 5677664
Q ss_pred cccCCCCccCHHHHHHHHHHHhcCCHHHHH
Q 011311 425 YRRGTENHVMADELARAVGCVMDGDSEVRK 454 (489)
Q Consensus 425 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~ 454 (489)
.-+.++++++|.++++ ++..++
T Consensus 333 -------~~d~~~l~~~i~~l~~-~~~~~~ 354 (406)
T 2gek_A 333 -------VDDADGMAAALIGILE-DDQLRA 354 (406)
T ss_dssp -------TTCHHHHHHHHHHHHH-CHHHHH
T ss_pred -------CCCHHHHHHHHHHHHc-CHHHHH
Confidence 3478999999999998 654443
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.65 E-value=8.4e-06 Score=83.69 Aligned_cols=84 Identities=15% Similarity=0.047 Sum_probs=59.9
Q ss_pred cCCCccccccCHH---HHhccC----CcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEe
Q 011311 353 KGRGMICGWAPQK---EVLAHS----AIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVEL 421 (489)
Q Consensus 353 ~~~~~v~~w~pq~---~iL~~~----~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l 421 (489)
.+++.+.+|+|+. .+|..+ ++ ||.- |--++++||+++|+|+|+.... ..... +..-..|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~-v~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEI-LDGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHH-TGGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHH-hcCCceEEEe
Confidence 4678888999865 478889 88 6632 2345899999999999998643 23333 3431467776
Q ss_pred eeccccCCCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 422 RLDYRRGTENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
+ .-+.++++++|.++++ ++..+
T Consensus 407 ~---------~~d~~~la~~i~~ll~-~~~~~ 428 (499)
T 2r60_A 407 D---------PEDPEDIARGLLKAFE-SEETW 428 (499)
T ss_dssp C---------TTCHHHHHHHHHHHHS-CHHHH
T ss_pred C---------CCCHHHHHHHHHHHHh-CHHHH
Confidence 5 3478999999999998 65433
No 36
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.59 E-value=4.7e-07 Score=89.74 Aligned_cols=159 Identities=13% Similarity=0.105 Sum_probs=96.4
Q ss_pred CceEEEeecCCcCCCH-HHHHHHHHHHhhc----CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCcccc
Q 011311 286 SSVVFLCFGSMGSFGE-EQIQEIASGLEKS----GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICG 360 (489)
Q Consensus 286 ~~vV~vs~GS~~~~~~-~~~~~~~~al~~~----~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~ 360 (489)
++.|+++.|....... +.+..+++++.+. +..+|+...+.. .+.+.. . .++. ...+++.+.+
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~----------~~~l~~-~-~~~~-~~~~~v~l~~ 269 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT----------KKRLED-L-EGFK-ELGDKIRFLP 269 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH----------HHHHHT-S-GGGG-GTGGGEEECC
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH----------HHHHHH-H-HHHh-cCCCCEEEEc
Confidence 5688888877543332 4566777777543 678888654210 000000 0 0000 1124566666
Q ss_pred ccCH---HHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHH
Q 011311 361 WAPQ---KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADE 437 (489)
Q Consensus 361 w~pq---~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~ 437 (489)
.+++ ..+++++++ +|+-.|. .+.||.+.|+|+|+++...+-+. .++. |.++.+. .++++
T Consensus 270 ~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~----------~d~~~ 331 (385)
T 4hwg_A 270 AFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG----------FKAER 331 (385)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC----------SSHHH
T ss_pred CCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC----------CCHHH
Confidence 5554 468999998 9999876 46999999999999987654222 2466 8776552 37899
Q ss_pred HHHHHHHHhcCCHHH---HHHHHHHHHHHHHHH-hcCCChHHHHHHHHHH
Q 011311 438 LARAVGCVMDGDSEV---RKRVKEVSEKARLAL-RDGGSSYAATGRLIED 483 (489)
Q Consensus 438 l~~ai~~vl~~~~~~---~~~a~~l~~~~~~~~-~~~g~~~~~~~~~~~~ 483 (489)
|.+++.++++++..+ ++++. .. ++|+++.+.++.+.+.
T Consensus 332 i~~ai~~ll~d~~~~~~m~~~~~--------~~~g~g~aa~rI~~~l~~~ 373 (385)
T 4hwg_A 332 VLQAVKTITEEHDNNKRTQGLVP--------DYNEAGLVSKKILRIVLSY 373 (385)
T ss_dssp HHHHHHHHHTTCBTTBCCSCCCH--------HHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhChHHHHHhhccCC--------CCCCCChHHHHHHHHHHHH
Confidence 999999999832222 22111 24 6788888766665544
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.57 E-value=0.00013 Score=71.28 Aligned_cols=90 Identities=13% Similarity=0.170 Sum_probs=65.1
Q ss_pred CCCccccccCH-HHHhccCCcceEEe----cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQ-KEVLAHSAIGGFVS----HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq-~~iL~~~~~~~~i~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+.++..+ ..+|..+++ +|. -|..+++.||+++|+|+|+....+ +...+.+. +.|+.+..
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~e~i~~~-~~g~~~~~----- 320 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVCG----YAHYIADA-NCGTVIAE----- 320 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTST----TTHHHHHH-TCEEEECS-----
T ss_pred CcEEECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCCC----chhhhccC-CceEEeCC-----
Confidence 56777777654 469999998 775 456789999999999999987642 34445455 78887751
Q ss_pred CCCccCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 011311 429 TENHVMADELARAVGCVMDGDSEVRKRVKEV 459 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l 459 (489)
.-+.++++++|.++++ +++.+++..+-
T Consensus 321 ---~~~~~~l~~~i~~l~~-~~~~~~~~~~~ 347 (374)
T 2iw1_A 321 ---PFSQEQLNEVLRKALT-QSPLRMAWAEN 347 (374)
T ss_dssp ---SCCHHHHHHHHHHHHH-CHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHc-ChHHHHHHHHH
Confidence 2488999999999998 66544443333
No 38
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.57 E-value=9.5e-07 Score=85.94 Aligned_cols=125 Identities=16% Similarity=0.123 Sum_probs=78.9
Q ss_pred EEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHH---
Q 011311 289 VFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQK--- 365 (489)
Q Consensus 289 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~--- 365 (489)
+++..|++. +...+..++++++..+.++++. |... . ...+ ..+..+..+++.+.+|+++.
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~---------~----~~~l-~~~~~~~~~~v~~~g~~~~~~l~ 226 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW---------E----PEYF-DEITRRYGSTVEPIGEVGGERRL 226 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC---------C----HHHH-HHHHHHHTTTEEECCCCCHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc---------c----HHHH-HHHHHHhCCCEEEeccCCHHHHH
Confidence 445567754 2334666777777777776654 4321 0 0111 11222333788888999976
Q ss_pred HHhccCCcceEEe--c------------CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHH--hhCeEEEeeeccccCC
Q 011311 366 EVLAHSAIGGFVS--H------------CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVR--DLGLAVELRLDYRRGT 429 (489)
Q Consensus 366 ~iL~~~~~~~~i~--H------------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~--~~G~G~~l~~~~~~~~ 429 (489)
.+|..+++ +|. . |--++++||+++|+|+|+....+ +...+.+ . +.|+.++
T Consensus 227 ~~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~-~~g~~~~------- 292 (342)
T 2iuy_A 227 DLLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGE-VVGYGTD------- 292 (342)
T ss_dssp HHHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT----HHHHGGGGEE-ECCSSSC-------
T ss_pred HHHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC----hHHHhcccCC-CceEEcC-------
Confidence 68999999 663 2 22468999999999999988643 3333323 2 3444332
Q ss_pred CCccCHHHHHHHHHHHhc
Q 011311 430 ENHVMADELARAVGCVMD 447 (489)
Q Consensus 430 ~~~~~~~~l~~ai~~vl~ 447 (489)
. +.++++++|.++++
T Consensus 293 --~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 --F-APDEARRTLAGLPA 307 (342)
T ss_dssp --C-CHHHHHHHHHTSCC
T ss_pred --C-CHHHHHHHHHHHHH
Confidence 5 89999999998886
No 39
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.38 E-value=1.6e-06 Score=75.99 Aligned_cols=144 Identities=10% Similarity=0.052 Sum_probs=88.3
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhc-CCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCH--
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKS-GVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQ-- 364 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq-- 364 (489)
.+++..|++. ....+..+++++... +.++++. |... ..+.+.. +.........+++.+.+|+++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~-G~~~---------~~~~l~~-~~~~~~~~l~~~v~~~g~~~~~e 90 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIV-GWFS---------KGDHAER-YARKIMKIAPDNVKFLGSVSEEE 90 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEE-BCCC---------TTSTHHH-HHHHHHHHSCTTEEEEESCCHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEE-ecCc---------cHHHHHH-HHHhhhcccCCcEEEeCCCCHHH
Confidence 4556678754 233456677777765 5666654 4331 0011111 000001123468888899998
Q ss_pred -HHHhccCCcceEEe---cCCc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHH
Q 011311 365 -KEVLAHSAIGGFVS---HCGW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 365 -~~iL~~~~~~~~i~---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
..+|..+++ +|. +.|+ .+++||+++|+|+|+... ..+...+.+. +.|+.+ .. +.++++
T Consensus 91 ~~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~~---------d~~~l~ 153 (177)
T 2f9f_A 91 LIDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-NA---------DVNEII 153 (177)
T ss_dssp HHHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-CS---------CHHHHH
T ss_pred HHHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-CC---------CHHHHH
Confidence 468999998 665 3344 499999999999999764 3444343333 577766 33 789999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHH
Q 011311 440 RAVGCVMDGDSEVRKRVKEVSE 461 (489)
Q Consensus 440 ~ai~~vl~~~~~~~~~a~~l~~ 461 (489)
++|.+++++.+.+++++++.++
T Consensus 154 ~~i~~l~~~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 154 DAMKKVSKNPDKFKKDCFRRAK 175 (177)
T ss_dssp HHHHHHHHCTTTTHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHh
Confidence 9999999733334666665544
No 40
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.27 E-value=0.0016 Score=64.79 Aligned_cols=83 Identities=17% Similarity=0.153 Sum_probs=58.7
Q ss_pred CCCccccccC---H---HHHhccCCcceEEecC----CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeee
Q 011311 354 GRGMICGWAP---Q---KEVLAHSAIGGFVSHC----GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRL 423 (489)
Q Consensus 354 ~~~~v~~w~p---q---~~iL~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 423 (489)
+++.+.+|++ + ..+|..+++ ||.-. .-+++.||+++|+|+|+.+.. .+...+.+. +.|+.+
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~~----g~~e~i~~~-~~g~l~-- 363 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAVG----GIKFQIVDG-ETGFLV-- 363 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESCH----HHHHHCCBT-TTEEEE--
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccCC----CChhheecC-CCeEEE--
Confidence 5777877765 3 348889998 77544 456899999999999997752 344333233 567655
Q ss_pred ccccCCCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 424 DYRRGTENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 424 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
. +.++++++|.++++ ++..+++
T Consensus 364 --------~-d~~~la~~i~~ll~-~~~~~~~ 385 (416)
T 2x6q_A 364 --------R-DANEAVEVVLYLLK-HPEVSKE 385 (416)
T ss_dssp --------S-SHHHHHHHHHHHHH-CHHHHHH
T ss_pred --------C-CHHHHHHHHHHHHh-CHHHHHH
Confidence 3 68899999999998 6644433
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.92 E-value=0.0018 Score=69.73 Aligned_cols=77 Identities=14% Similarity=0.061 Sum_probs=50.0
Q ss_pred CCCcccc----ccCHHHHhc----cCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEe
Q 011311 354 GRGMICG----WAPQKEVLA----HSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVEL 421 (489)
Q Consensus 354 ~~~~v~~----w~pq~~iL~----~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l 421 (489)
+++.+.+ ++|+.++.. .+++ ||.- |--.+++||+++|+|+|+-... .....+.+. ..|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd~G----G~~EiV~dg-~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVHG-KSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEESSB----THHHHCCBT-TTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeCCC----ChHHHHccC-CcEEEe
Confidence 5666666 444455544 4566 6643 3346899999999999996443 233333233 567776
Q ss_pred eeccccCCCCccCHHHHHHHHHHHh
Q 011311 422 RLDYRRGTENHVMADELARAVGCVM 446 (489)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~ai~~vl 446 (489)
+ .-+.++++++|.+++
T Consensus 713 ~---------p~D~e~LA~aI~~lL 728 (816)
T 3s28_A 713 D---------PYHGDQAADTLADFF 728 (816)
T ss_dssp C---------TTSHHHHHHHHHHHH
T ss_pred C---------CCCHHHHHHHHHHHH
Confidence 5 347899999997776
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.89 E-value=0.0037 Score=63.47 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=79.2
Q ss_pred eEEEeecCCc-CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCc-cccccCHH
Q 011311 288 VVFLCFGSMG-SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGM-ICGWAPQK 365 (489)
Q Consensus 288 vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~-v~~w~pq~ 365 (489)
.+++..|.+. ....+.+.+.+..+.+.+.+++++ |... +.....+ .....+..+++. +.++ ++.
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~-----------~~~~~~l-~~~~~~~~~~v~~~~g~-~~~ 357 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGD-----------VALEGAL-LAAASRHHGRVGVAIGY-NEP 357 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBC-----------HHHHHHH-HHHHHHTTTTEEEEESC-CHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCc-----------hHHHHHH-HHHHHhCCCcEEEecCC-CHH
Confidence 4667788865 233344444444444446676655 4320 0000101 111122235665 4577 543
Q ss_pred ---HHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhh---------CeEEEeeeccccCC
Q 011311 366 ---EVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDL---------GLAVELRLDYRRGT 429 (489)
Q Consensus 366 ---~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~ 429 (489)
.+|..+++ ||.- |--.+++||+++|+|+|+.... ... .+++.- +.|+.++
T Consensus 358 ~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~-e~v~~~~~~~~~~~~~~G~l~~------- 423 (485)
T 1rzu_A 358 LSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLA-DTVIDANHAALASKAATGVQFS------- 423 (485)
T ss_dssp HHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHH-HHCCBCCHHHHHTTCCCBEEES-------
T ss_pred HHHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chh-heecccccccccccCCcceEeC-------
Confidence 57999998 6632 3356899999999999997652 233 233441 3677665
Q ss_pred CCccCHHHHHHHHHHHh---cCCHHHHHH
Q 011311 430 ENHVMADELARAVGCVM---DGDSEVRKR 455 (489)
Q Consensus 430 ~~~~~~~~l~~ai~~vl---~~~~~~~~~ 455 (489)
.-+.++++++|.+++ + +++.+++
T Consensus 424 --~~d~~~la~~i~~ll~~~~-~~~~~~~ 449 (485)
T 1rzu_A 424 --PVTLDGLKQAIRRTVRYYH-DPKLWTQ 449 (485)
T ss_dssp --SCSHHHHHHHHHHHHHHHT-CHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHhC-CHHHHHH
Confidence 347899999999999 6 5544433
No 43
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.58 E-value=0.00091 Score=68.99 Aligned_cols=178 Identities=12% Similarity=0.089 Sum_probs=102.9
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEe--cCCCCCCCCCCCCCcccccccCChhh-HhhhcCCCcccccc
Q 011311 286 SSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSL--RKTPPKDRPEMPGEYTCVEDILPRGF-QERSKGRGMICGWA 362 (489)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~--~~~~~~~~~~~~~~~~~~~~~lp~~~-~~~~~~~~~v~~w~ 362 (489)
+.++|.||++..-..++.+...++-+++.+..++|.. +... +..+. +-..+ .....+++.+.+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--------g~~~~----~~~~~~~~GI~~Rv~F~g~~ 507 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--------GITHP----YVERFIKSYLGDSATAHPHS 507 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--------GGGHH----HHHHHHHHHHGGGEEEECCC
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--------hhhHH----HHHHHHHcCCCccEEEcCCC
Confidence 3689999999887788888888888888888888753 3220 00000 00111 11223566777888
Q ss_pred CHHH---HhccCCcceEEe---cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHH
Q 011311 363 PQKE---VLAHSAIGGFVS---HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMAD 436 (489)
Q Consensus 363 pq~~---iL~~~~~~~~i~---HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~ 436 (489)
|+.+ .+..+++ |+. .+|.+|+.||+++|||+|+++-..=--..+.-+-...|+.-.+- .-+.+
T Consensus 508 p~~e~la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LI---------A~d~e 576 (631)
T 3q3e_A 508 PYHQYLRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLI---------ANTVD 576 (631)
T ss_dssp CHHHHHHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGE---------ESSHH
T ss_pred CHHHHHHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCccee---------cCCHH
Confidence 8765 5588888 653 37889999999999999998864322222222223336542111 23677
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHH-HHH-HhcC--CChHHHHHHHHHHHhhC
Q 011311 437 ELARAVGCVMDGDSEVRKRVKEVSEKA-RLA-LRDG--GSSYAATGRLIEDLFGS 487 (489)
Q Consensus 437 ~l~~ai~~vl~~~~~~~~~a~~l~~~~-~~~-~~~~--g~~~~~~~~~~~~~~~~ 487 (489)
+..+...++.+ |++.+++.++-...- ..+ +-++ ..-.+.+++..++|.+.
T Consensus 577 eYv~~Av~La~-D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w~~~ 630 (631)
T 3q3e_A 577 EYVERAVRLAE-NHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAFLKE 630 (631)
T ss_dssp HHHHHHHHHHH-CHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhC-CHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHhc
Confidence 77666667887 665544433222211 111 2122 22244666777766654
No 44
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.42 E-value=0.0011 Score=56.61 Aligned_cols=81 Identities=15% Similarity=0.238 Sum_probs=53.0
Q ss_pred CCCccccccCHH---HHhccCCcceEEe----cCCchhHHHHHHhCC-cEEeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 354 GRGMICGWAPQK---EVLAHSAIGGFVS----HCGWNSILESVWFGV-PIVTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 354 ~~~~v~~w~pq~---~iL~~~~~~~~i~----HgG~~s~~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
.++.+ +|+|+. .++..+++ +|. -|.-.++.||+++|+ |+|+-...+.-.. . ...-+. .+.
T Consensus 56 ~~v~~-g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~---~-~~~~~~--~~~--- 123 (166)
T 3qhp_A 56 VKAEF-GFVNSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSATRQ---F-ALDERS--LFE--- 123 (166)
T ss_dssp CEEEC-CCCCHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGG---G-CSSGGG--EEC---
T ss_pred CeEEE-eecCHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhh---h-ccCCce--EEc---
Confidence 36677 999875 47889998 664 233469999999996 9999432222111 1 122122 222
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 426 RRGTENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
.-+.++++++|.++++ ++..+
T Consensus 124 ------~~~~~~l~~~i~~l~~-~~~~~ 144 (166)
T 3qhp_A 124 ------PNNAKDLSAKIDWWLE-NKLER 144 (166)
T ss_dssp ------TTCHHHHHHHHHHHHH-CHHHH
T ss_pred ------CCCHHHHHHHHHHHHh-CHHHH
Confidence 3489999999999998 65433
No 45
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.38 E-value=0.0033 Score=65.23 Aligned_cols=88 Identities=15% Similarity=0.145 Sum_probs=59.6
Q ss_pred CCCccccccCHH---HHhccCCcceEEe---cCCchhHHHHHHhCCcEEeccCcchhhHH-HHHHHHhhCeEEEeeeccc
Q 011311 354 GRGMICGWAPQK---EVLAHSAIGGFVS---HCGWNSILESVWFGVPIVTWPIYAEQQIN-AFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 354 ~~~~v~~w~pq~---~iL~~~~~~~~i~---HgG~~s~~eal~~GvP~v~~P~~~DQ~~n-a~~v~~~~G~G~~l~~~~~ 426 (489)
+++.+.+|+|+. .++..+++ ||. .|+.++++||+++|+|+|++|-..=.-.. +..+.+ .|+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 567788999854 47889998 762 26667899999999999998753111112 223333 26543221
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 427 RGTENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
. +.+++++++.++++ |+..+++
T Consensus 507 -----~-~~~~la~~i~~l~~-~~~~~~~ 528 (568)
T 2vsy_A 507 -----A-DDAAFVAKAVALAS-DPAALTA 528 (568)
T ss_dssp -----S-SHHHHHHHHHHHHH-CHHHHHH
T ss_pred -----C-CHHHHHHHHHHHhc-CHHHHHH
Confidence 2 78999999999998 6655443
No 46
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.35 E-value=0.0026 Score=55.98 Aligned_cols=78 Identities=10% Similarity=0.033 Sum_probs=57.2
Q ss_pred CCcc-ccccCHH---HHhccCCcceEEecC---C-chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 355 RGMI-CGWAPQK---EVLAHSAIGGFVSHC---G-WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 355 ~~~v-~~w~pq~---~iL~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
++.+ .+|+++. .+|..+++ +|.-. | -.++.||+++|+|+|+.... .....+ +. +.|+.+.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEec----
Confidence 7888 8999954 58899998 66432 2 46899999999999987643 333333 33 6777665
Q ss_pred cCCCCccCHHHHHHHHHHHhc-CC
Q 011311 427 RGTENHVMADELARAVGCVMD-GD 449 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~-~~ 449 (489)
.-+.++++++|.++++ +.
T Consensus 164 -----~~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 164 -----AGDPGELANAILKALELSR 182 (200)
T ss_dssp -----TTCHHHHHHHHHHHHHCCH
T ss_pred -----CCCHHHHHHHHHHHHhcCH
Confidence 3478999999999997 53
No 47
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.26 E-value=0.0025 Score=68.24 Aligned_cols=143 Identities=21% Similarity=0.205 Sum_probs=91.1
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHh--hhcCCCcccccc
Q 011311 285 ASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQE--RSKGRGMICGWA 362 (489)
Q Consensus 285 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~v~~w~ 362 (489)
++.+||.||-+..-..++.+..-++-|++.+--++|....+.. ....+-..+.. -..+++.+.+..
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~------------~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV------------GEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG------------GHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH------------HHHHHHHHHHhcCCCcCeEEECCCC
Confidence 4569999999988889999999999999999999998875410 00111111111 113566667888
Q ss_pred CHHH---HhccCCcceEEe---cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHH
Q 011311 363 PQKE---VLAHSAIGGFVS---HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMAD 436 (489)
Q Consensus 363 pq~~---iL~~~~~~~~i~---HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~ 436 (489)
|+.+ .+..+++ ++- .+|.+|+.|||++|||+|.++-..=--..+.-+-..+|+.-.+ .-+.+
T Consensus 589 ~~~~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i----------a~~~~ 656 (723)
T 4gyw_A 589 PKEEHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELI----------AKNRQ 656 (723)
T ss_dssp CHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGB----------CSSHH
T ss_pred CHHHHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccc----------cCCHH
Confidence 8655 5566777 765 8899999999999999999995322222333333444654322 22444
Q ss_pred H-HHHHHHHHhcCCHHHH
Q 011311 437 E-LARAVGCVMDGDSEVR 453 (489)
Q Consensus 437 ~-l~~ai~~vl~~~~~~~ 453 (489)
+ +..|| ++-+ |...+
T Consensus 657 ~Y~~~a~-~la~-d~~~l 672 (723)
T 4gyw_A 657 EYEDIAV-KLGT-DLEYL 672 (723)
T ss_dssp HHHHHHH-HHHH-CHHHH
T ss_pred HHHHHHH-HHhc-CHHHH
Confidence 4 55555 4555 55433
No 48
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.99 E-value=0.016 Score=57.30 Aligned_cols=81 Identities=12% Similarity=0.051 Sum_probs=54.1
Q ss_pred CccccccCHHH---HhccCCcceEEe----cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCe-----------
Q 011311 356 GMICGWAPQKE---VLAHSAIGGFVS----HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGL----------- 417 (489)
Q Consensus 356 ~~v~~w~pq~~---iL~~~~~~~~i~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~----------- 417 (489)
+.+.+|+|+.+ +|..+++ +|. -|.-.+++||+++|+|+|+-... ..... ++. |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~-v~~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDY-FSG-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHH-SCT-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHH-Hcc-Ccccccccccccc
Confidence 44459999544 7889998 663 23345899999999999996543 23322 233 33
Q ss_pred -----EE--EeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 418 -----AV--ELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 418 -----G~--~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
|+ .+. .-+.++++++| ++++ +++.+++
T Consensus 328 ~~~~~G~~gl~~---------~~d~~~la~~i-~l~~-~~~~~~~ 361 (413)
T 3oy2_A 328 VDDRDGIGGIEG---------IIDVDDLVEAF-TFFK-DEKNRKE 361 (413)
T ss_dssp CTTTCSSCCEEE---------ECCHHHHHHHH-HHTT-SHHHHHH
T ss_pred cccccCcceeeC---------CCCHHHHHHHH-HHhc-CHHHHHH
Confidence 43 443 23899999999 9998 6654433
No 49
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=96.95 E-value=0.0019 Score=63.46 Aligned_cols=94 Identities=16% Similarity=0.242 Sum_probs=65.8
Q ss_pred CCccccccCH-HHHhccCCcceEEe---c--CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 355 RGMICGWAPQ-KEVLAHSAIGGFVS---H--CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 355 ~~~v~~w~pq-~~iL~~~~~~~~i~---H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
++++.++..+ ..+++.+++ |+. . +|..+++||+++|+|+|+-|..++.......+.+. |.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------
Confidence 3444454443 458999997 554 1 23478999999999999878777777766555455 8776542
Q ss_pred CCCccCHHHHHHHHHHHhcCC--HHHHHHHHHHHHH
Q 011311 429 TENHVMADELARAVGCVMDGD--SEVRKRVKEVSEK 462 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~--~~~~~~a~~l~~~ 462 (489)
+.++|+++|.++++++ .+|.+++++..+.
T Consensus 332 -----d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 -----NETELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp -----SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 6789999999999741 2566777666554
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.74 E-value=0.0022 Score=61.99 Aligned_cols=107 Identities=15% Similarity=0.119 Sum_probs=72.3
Q ss_pred CCccccccCHHHH---hccCCcceEEecCC---------chhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEee
Q 011311 355 RGMICGWAPQKEV---LAHSAIGGFVSHCG---------WNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELR 422 (489)
Q Consensus 355 ~~~v~~w~pq~~i---L~~~~~~~~i~HgG---------~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~ 422 (489)
|+.+.+|+|+.++ |..++++.+..-+. -+-+.|++++|+|+|+.+ ...++..+.+. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 7788899999775 54555543432222 235889999999999866 34556566566 9998763
Q ss_pred eccccCCCCccCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 423 LDYRRGTENHVMADELARAVGCVMDGD--SEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 423 ~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
+.+++.+++.++.. + .+|++|+++.+++++. |-.....+.+-+.
T Consensus 290 -----------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~ 335 (339)
T 3rhz_A 290 -----------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK----GFFTRRLLTESVF 335 (339)
T ss_dssp -----------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHH
Confidence 46888889987654 3 3788888888887664 4444444444443
No 51
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.36 E-value=0.052 Score=54.84 Aligned_cols=138 Identities=13% Similarity=0.096 Sum_probs=78.5
Q ss_pred ceEEEeecCCc-CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCc-cccccCH
Q 011311 287 SVVFLCFGSMG-SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGM-ICGWAPQ 364 (489)
Q Consensus 287 ~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~-v~~w~pq 364 (489)
..+++..|.+. ....+.+.+.+..+.+.+.+++++-.+.. .....+ .....+..+++. +.++ ++
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~------------~~~~~l-~~~~~~~~~~v~~~~g~-~~ 357 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDP------------VLQEGF-LAAAAEYPGQVGVQIGY-HE 357 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECH------------HHHHHH-HHHHHHSTTTEEEEESC-CH
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCch------------HHHHHH-HHHHHhCCCcEEEeCCC-CH
Confidence 45666677754 23334444444444444667665532210 000001 011122235664 5577 54
Q ss_pred H---HHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhh---------CeEEEeeeccccC
Q 011311 365 K---EVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDL---------GLAVELRLDYRRG 428 (489)
Q Consensus 365 ~---~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~ 428 (489)
. .+|..+++ ||.- |--++++||+++|+|+|+.... ... .+++.- +.|+.++
T Consensus 358 ~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~-e~v~~~~~~~~~~~~~~G~l~~------ 424 (485)
T 2qzs_A 358 AFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLA-DTVSDCSLENLADGVASGFVFE------ 424 (485)
T ss_dssp HHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHH-HHCCBCCHHHHHTTCCCBEEEC------
T ss_pred HHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----Ccc-ceeccCccccccccccceEEEC------
Confidence 3 58999998 6632 3356889999999999998652 233 233441 3677665
Q ss_pred CCCccCHHHHHHHHHHHh---cCCHHHHHH
Q 011311 429 TENHVMADELARAVGCVM---DGDSEVRKR 455 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl---~~~~~~~~~ 455 (489)
.-+.++++++|.+++ + +++.+++
T Consensus 425 ---~~d~~~la~~i~~ll~~~~-~~~~~~~ 450 (485)
T 2qzs_A 425 ---DSNAWSLLRAIRRAFVLWS-RPSLWRF 450 (485)
T ss_dssp ---SSSHHHHHHHHHHHHHHHT-SHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHHHcC-CHHHHHH
Confidence 347899999999999 5 5554443
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=95.84 E-value=1.4 Score=42.33 Aligned_cols=96 Identities=13% Similarity=0.216 Sum_probs=58.8
Q ss_pred CCceEEEeecCCc---CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCc-ccc
Q 011311 285 ASSVVFLCFGSMG---SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGM-ICG 360 (489)
Q Consensus 285 ~~~vV~vs~GS~~---~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~-v~~ 360 (489)
++++|.+.-||-. ..+.+.+.++++.|.+.|.++++ ++.+. +.+ +-+.+....+.++. +.+
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~---------e~~-----~~~~i~~~~~~~~~~l~g 248 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPM---------DLE-----MVQPVVEQMETKPIVATG 248 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTT---------THH-----HHHHHHHTCSSCCEECTT
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcc---------hHH-----HHHHHHHhcccccEEeeC
Confidence 4568888888743 56788899999999877888876 44431 111 10111111222221 222
Q ss_pred cc--CH-HHHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 361 WA--PQ-KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 361 w~--pq-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
-. .+ .+++.++++ +|+.- .|.++=|.+.|+|+|++
T Consensus 249 ~~sl~e~~ali~~a~~--~i~~D-sG~~HlAaa~g~P~v~l 286 (349)
T 3tov_A 249 KFQLGPLAAAMNRCNL--LITND-SGPMHVGISQGVPIVAL 286 (349)
T ss_dssp CCCHHHHHHHHHTCSE--EEEES-SHHHHHHHTTTCCEEEE
T ss_pred CCCHHHHHHHHHhCCE--EEECC-CCHHHHHHhcCCCEEEE
Confidence 22 23 458999998 99972 23444478899999996
No 53
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.17 E-value=0.009 Score=59.44 Aligned_cols=84 Identities=18% Similarity=0.126 Sum_probs=55.8
Q ss_pred CCCccccccCHHH---HhccCCcceEEecC---Cc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 354 GRGMICGWAPQKE---VLAHSAIGGFVSHC---GW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 354 ~~~~v~~w~pq~~---iL~~~~~~~~i~Hg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
+++.+.+++|+.+ +|+.+++ ||.-. |. .+++||+++|+|+|+ -..+ -. .+++.-..|+.++
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g-~~----e~v~~~~~G~lv~---- 362 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE-NK----DLSNWHSNIVSLE---- 362 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT-TB----CGGGTBTTEEEES----
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC-cc----hhhhcCCCEEEeC----
Confidence 4567789998764 7889998 66421 33 468999999999998 3332 11 2334414677665
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 427 RGTENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
.-+.++++++|.++++ |+..+++
T Consensus 363 -----~~d~~~la~ai~~ll~-~~~~~~~ 385 (413)
T 2x0d_A 363 -----QLNPENIAETLVELCM-SFNNRDV 385 (413)
T ss_dssp -----SCSHHHHHHHHHHHHH-HTC----
T ss_pred -----CCCHHHHHHHHHHHHc-CHHHHHH
Confidence 3488999999999998 5444433
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=94.52 E-value=3.3 Score=39.25 Aligned_cols=96 Identities=13% Similarity=0.141 Sum_probs=59.0
Q ss_pred CCceEEEeecC-C-c--CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhh----cCCC
Q 011311 285 ASSVVFLCFGS-M-G--SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERS----KGRG 356 (489)
Q Consensus 285 ~~~vV~vs~GS-~-~--~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~----~~~~ 356 (489)
+++.|.+.-|| . . ..+.+.+.++++.|.+.+.++++. +.+. +.+ +-..+.... ..++
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~---------e~~-----~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAK---------DHE-----AGNEILAALNTEQQAWC 243 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGG---------GHH-----HHHHHHTTSCHHHHTTE
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChh---------hHH-----HHHHHHHhhhhccccce
Confidence 45678888888 3 2 567788999999998778888764 4331 100 000111110 0122
Q ss_pred -ccccccC--H-HHHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 357 -MICGWAP--Q-KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 357 -~v~~w~p--q-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
.+.+..+ + .+++.++++ +|+.- .|.++-|.+.|+|+|++
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 1223322 2 469999999 99973 45577788999999986
No 55
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=92.60 E-value=0.095 Score=51.75 Aligned_cols=73 Identities=15% Similarity=0.135 Sum_probs=54.7
Q ss_pred CCCccccccCHHH---HhccCCcceEEe---cCC-chhHHHHH-------HhCCcEEeccCcchhhHHHHHHHHhhCeEE
Q 011311 354 GRGMICGWAPQKE---VLAHSAIGGFVS---HCG-WNSILESV-------WFGVPIVTWPIYAEQQINAFQMVRDLGLAV 419 (489)
Q Consensus 354 ~~~~v~~w~pq~~---iL~~~~~~~~i~---HgG-~~s~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~ 419 (489)
+++.+.+++|+.+ +|..+++ ||. +-| -++++||+ ++|+|+|+-.. +.+. ..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceE
Confidence 6778889999754 7889998 653 233 45789999 99999999765 3333 4576
Q ss_pred E-eeeccccCCCCccCHHHHHHHHHHHhcC
Q 011311 420 E-LRLDYRRGTENHVMADELARAVGCVMDG 448 (489)
Q Consensus 420 ~-l~~~~~~~~~~~~~~~~l~~ai~~vl~~ 448 (489)
. ++ .-+.++++++|.+++++
T Consensus 332 l~v~---------~~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 332 FGYT---------PGNADSVIAAITQALEA 352 (406)
T ss_dssp EEEC---------TTCHHHHHHHHHHHHHC
T ss_pred EEeC---------CCCHHHHHHHHHHHHhC
Confidence 5 54 33789999999999983
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.45 E-value=0.82 Score=46.80 Aligned_cols=141 Identities=9% Similarity=0.080 Sum_probs=74.7
Q ss_pred ceEEEeecCCc-CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHH
Q 011311 287 SVVFLCFGSMG-SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQK 365 (489)
Q Consensus 287 ~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~ 365 (489)
.++++..|.+. ....+.+.+.+..|.+.+.++++...+.. .+. ..+ .......++++.+..+.++.
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---------~~~---~~~-~~~~~~~~~~v~~~~~~~~~ 393 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK---------KFE---KLL-KSMEEKYPGKVRAVVKFNAP 393 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH---------HHH---HHH-HHHHHHSTTTEEEECSCCHH
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc---------hHH---HHH-HHHHhhcCCceEEEEeccHH
Confidence 34556677765 23334444444444455677666543320 000 000 11222334666666666654
Q ss_pred ---HHhccCCcceEEecC---Cc-hhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCC-CCccCHHH
Q 011311 366 ---EVLAHSAIGGFVSHC---GW-NSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGT-ENHVMADE 437 (489)
Q Consensus 366 ---~iL~~~~~~~~i~Hg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~-~~~~~~~~ 437 (489)
.+++.+++ ||.-. |. .+++||+++|+|+|+-...+ ....|.+. .-|.........+. =..-+.+.
T Consensus 394 ~~~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG----~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~ 466 (536)
T 3vue_A 394 LAHLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTGG----LVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKK 466 (536)
T ss_dssp HHHHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCTH----HHHHCCBT-TTEEECCCCCSCTTCCCHHHHHH
T ss_pred HHHHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCCC----chheeeCC-CCccccccCCCceeEECCCCHHH
Confidence 37889998 66431 32 48999999999999976532 22232222 34543322100000 00235688
Q ss_pred HHHHHHHHhc
Q 011311 438 LARAVGCVMD 447 (489)
Q Consensus 438 l~~ai~~vl~ 447 (489)
|+++|+++++
T Consensus 467 la~ai~ral~ 476 (536)
T 3vue_A 467 VAATLKRAIK 476 (536)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988774
No 57
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=84.74 E-value=6.1 Score=39.65 Aligned_cols=105 Identities=16% Similarity=-0.002 Sum_probs=66.5
Q ss_pred ccccCHHH---HhccCCcceEEe---cCCch-hHHHHHHhCC-----cEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 359 CGWAPQKE---VLAHSAIGGFVS---HCGWN-SILESVWFGV-----PIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 359 ~~w~pq~~---iL~~~~~~~~i~---HgG~~-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+--.. + .-|+.++
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~----l----~~g~lv~---- 402 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE----L----TSALIVN---- 402 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT----C----TTSEEEC----
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH----h----CCeEEEC----
Confidence 47778764 7888998 664 33555 8899999998 6766554332111 1 1345554
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhhC
Q 011311 427 RGTENHVMADELARAVGCVMDGDSE-VRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~~~~~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
.-+.++++++|.++|+.++. .+++.++..+.+++ -+.....++|++.+.+.
T Consensus 403 -----p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 -----PYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp -----TTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred -----CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 34789999999999984333 33333333333332 35677888888887654
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=78.78 E-value=2.4 Score=39.91 Aligned_cols=135 Identities=16% Similarity=0.123 Sum_probs=75.7
Q ss_pred CCceEEEeecCCc---CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccc
Q 011311 285 ASSVVFLCFGSMG---SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGW 361 (489)
Q Consensus 285 ~~~vV~vs~GS~~---~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w 361 (489)
.++.|.+.-||-. ..+.+.+.++++.|.+.|.++++..+... +. + +-+.+.+.. +++.+.+-
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~---------e~-~----~~~~i~~~~-~~~~l~g~ 241 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH---------EE-E----RAKRLAEGF-AYVEVLPK 241 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH---------HH-H----HHHHHHTTC-TTEEECCC
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH---------HH-H----HHHHHHhhC-CcccccCC
Confidence 3467777777643 56778899999998877888776544321 00 0 001111111 12222222
Q ss_pred --cCH-HHHhccCCcceEEec-CCchhHHHHHHhCCcEEec--cCcchhhHHHHHHHHhhCeE-EEeeeccccCCCCccC
Q 011311 362 --APQ-KEVLAHSAIGGFVSH-CGWNSILESVWFGVPIVTW--PIYAEQQINAFQMVRDLGLA-VELRLDYRRGTENHVM 434 (489)
Q Consensus 362 --~pq-~~iL~~~~~~~~i~H-gG~~s~~eal~~GvP~v~~--P~~~DQ~~na~~v~~~~G~G-~~l~~~~~~~~~~~~~ 434 (489)
+.+ .+++.++++ +|+. .|. ++=|.+.|+|+|++ |.... .+ .-+|-. ..+... ..-. ..++
T Consensus 242 ~sl~el~ali~~a~l--~I~~DSG~--~HlAaa~g~P~v~lfg~t~p~--~~-----~P~~~~~~~~~~~-~~cm-~~I~ 308 (326)
T 2gt1_A 242 MSLEGVARVLAGAKF--VVSVDTGL--SHLTAALDRPNITVYGPTDPG--LI-----GGYGKNQMVCRAP-GNEL-SQLT 308 (326)
T ss_dssp CCHHHHHHHHHTCSE--EEEESSHH--HHHHHHTTCCEEEEESSSCHH--HH-----CCCSSSEEEEECG-GGCG-GGCC
T ss_pred CCHHHHHHHHHhCCE--EEecCCcH--HHHHHHcCCCEEEEECCCChh--hc-----CCCCCCceEecCC-cccc-cCCC
Confidence 223 459999999 9998 544 33366699999988 32111 11 111221 112110 0001 2689
Q ss_pred HHHHHHHHHHHhc
Q 011311 435 ADELARAVGCVMD 447 (489)
Q Consensus 435 ~~~l~~ai~~vl~ 447 (489)
.|++.++++++++
T Consensus 309 ~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 309 ANAVKQFIEENAE 321 (326)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999997
No 59
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=75.68 E-value=14 Score=38.63 Aligned_cols=41 Identities=20% Similarity=0.256 Sum_probs=31.2
Q ss_pred cccCH---------HHHhccCCcceEEecC---Cc-hhHHHHHHhCCcEEeccCcc
Q 011311 360 GWAPQ---------KEVLAHSAIGGFVSHC---GW-NSILESVWFGVPIVTWPIYA 402 (489)
Q Consensus 360 ~w~pq---------~~iL~~~~~~~~i~Hg---G~-~s~~eal~~GvP~v~~P~~~ 402 (489)
.|++. .++++.+++ ||.-. |+ .+.+||+++|+|+|+--..+
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 78765 468999999 66442 33 48999999999999966543
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=74.07 E-value=18 Score=36.24 Aligned_cols=109 Identities=11% Similarity=0.023 Sum_probs=68.9
Q ss_pred CCccccccCHH---HHhccCCcceEEe---cCCchh-HHHHHHhC---CcEEeccCcchhhHHHHHHHHhhCeEEEeeec
Q 011311 355 RGMICGWAPQK---EVLAHSAIGGFVS---HCGWNS-ILESVWFG---VPIVTWPIYAEQQINAFQMVRDLGLAVELRLD 424 (489)
Q Consensus 355 ~~~v~~w~pq~---~iL~~~~~~~~i~---HgG~~s-~~eal~~G---vP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 424 (489)
.+.+...+|+. .++..+++ ||. +=|+|- ..|++++| .|+|+--+.+ .+..+ . .-|+.++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l-~--~~allVn-- 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVL-G--EYCRSVN-- 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHH-G--GGSEEEC--
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHh-C--CCEEEEC--
Confidence 35555777864 47778888 543 458884 58999996 6666554433 12121 1 1366665
Q ss_pred cccCCCCccCHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 425 YRRGTENHVMADELARAVGCVMDGD-SEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 425 ~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
..+.++++++|.++|+.+ ++-+++.+++.+.+++ -....-.+.|+++|.+
T Consensus 422 -------P~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 422 -------PFDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp -------TTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhh
Confidence 458999999999999733 2444454444444332 3566778888888864
No 61
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=69.31 E-value=33 Score=29.01 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=53.9
Q ss_pred hhHHHHhhhcCCCCceEEEeecC-CcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhh
Q 011311 273 RDEIIRWLDDQPASSVVFLCFGS-MGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQER 351 (489)
Q Consensus 273 ~~~l~~~l~~~~~~~vV~vs~GS-~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~ 351 (489)
-.++-.+|.+. ....|+-|. ... .....++..+.|-++|=++.... ...+....
T Consensus 34 A~~lg~~La~~---g~~lVsGGg~~Gi-----m~aa~~gAl~~gG~tigVlP~~~---------------~~~~~~~~-- 88 (176)
T 2iz6_A 34 ANELGKQIATH---GWILLTGGRSLGV-----MHEAMKGAKEAGGTTIGVLPGPD---------------TSEISDAV-- 88 (176)
T ss_dssp HHHHHHHHHHT---TCEEEEECSSSSH-----HHHHHHHHHHTTCCEEEEECC--------------------CCTTC--
T ss_pred HHHHHHHHHHC---CCEEEECCCccCH-----hHHHHHHHHHcCCEEEEEeCchh---------------hhhhccCC--
Confidence 34566777764 356666665 332 23445555556666666553220 00110000
Q ss_pred hcCCCccccccCHH-HHh-ccCCcceEEecCCchhHHHH---HHhCCcEEeccCc
Q 011311 352 SKGRGMICGWAPQK-EVL-AHSAIGGFVSHCGWNSILES---VWFGVPIVTWPIY 401 (489)
Q Consensus 352 ~~~~~~v~~w~pq~-~iL-~~~~~~~~i~HgG~~s~~ea---l~~GvP~v~~P~~ 401 (489)
...++.+..++. .++ ..++ ..++--||.||+.|+ +.+++|++.+|.+
T Consensus 89 --~~~i~~~~~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 89 --DIPIVTGLGSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp --SEEEECCCCSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred --ceeEEcCCHHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 111233444543 233 3444 356678999987665 6799999999994
No 62
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=60.50 E-value=8.1 Score=33.11 Aligned_cols=60 Identities=12% Similarity=0.129 Sum_probs=43.1
Q ss_pred HHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCH------HHHHHHHHHHHHHHH----HHhcCCChHHHHHHHH
Q 011311 412 VRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDS------EVRKRVKEVSEKARL----ALRDGGSSYAATGRLI 481 (489)
Q Consensus 412 ~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~------~~~~~a~~l~~~~~~----~~~~~g~~~~~~~~~~ 481 (489)
.+.-|+|+ .+|+|+|.++|.++++.+. +|+ |.-.+-..+|+ -|.++..-...+|+-+
T Consensus 108 e~~cGVGV------------~VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~ 174 (187)
T 3tl4_X 108 NENSGVGI------------EITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEV 174 (187)
T ss_dssp HHTTTTTC------------CCCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHH
T ss_pred HHHCCCCe------------EeCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHH
Confidence 34449997 4699999999999996332 566 77777777765 2477778788888766
Q ss_pred HHH
Q 011311 482 EDL 484 (489)
Q Consensus 482 ~~~ 484 (489)
-++
T Consensus 175 l~l 177 (187)
T 3tl4_X 175 LKL 177 (187)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 63
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=55.06 E-value=36 Score=32.04 Aligned_cols=73 Identities=7% Similarity=0.159 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEec
Q 011311 300 GEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSH 379 (489)
Q Consensus 300 ~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~H 379 (489)
+.+...++.+++.+..++.||.+++.- +-.++.++++...|-.+|.. ||-+
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------------------------g~~rlL~~lD~~~i~~~PK~--~~Gy 113 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGY---------------------------NSNGLLKYLDYDLIRENPKF--FCGY 113 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS---------------------------CGGGGGGGCCHHHHHTSCCE--EEEC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc---------------------------cHHHHHhhcChhHHHhCCeE--EEEe
Confidence 445688899999999999999988762 22356677877777778888 9999
Q ss_pred CCchhHHHHHH--hCCcEEeccCc
Q 011311 380 CGWNSILESVW--FGVPIVTWPIY 401 (489)
Q Consensus 380 gG~~s~~eal~--~GvP~v~~P~~ 401 (489)
.-...++-+++ .|++.+.=|+.
T Consensus 114 SDiTaL~~al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 114 SDITALNNAIYTKTGLVTYSGPHF 137 (331)
T ss_dssp GGGHHHHHHHHHHHCBCEEECCCG
T ss_pred cchHHHHHHHHHhhCCcEEEccch
Confidence 99999998887 59998887764
No 64
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=49.68 E-value=49 Score=31.04 Aligned_cols=73 Identities=5% Similarity=0.116 Sum_probs=57.4
Q ss_pred CHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEec
Q 011311 300 GEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSH 379 (489)
Q Consensus 300 ~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~H 379 (489)
+.+...++.+++.+..++.||..++.. +..++.++++...|-.+|.. ||-+
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------------------------g~~rlL~~LD~~~i~~~PK~--~~Gy 113 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGF---------------------------NSNQLLPYLDYDLISENPKI--LCGF 113 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS---------------------------CGGGGGGGCCHHHHHHSCCE--EEEC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCch---------------------------hHHHHhhhcchhhhccCCeE--EEec
Confidence 445688899999999999999987652 22367778888888888888 9999
Q ss_pred CCchhHHHHHH--hCCcEEeccCc
Q 011311 380 CGWNSILESVW--FGVPIVTWPIY 401 (489)
Q Consensus 380 gG~~s~~eal~--~GvP~v~~P~~ 401 (489)
.-..+++-+++ .|+..+.=|+.
T Consensus 114 SDiT~L~~al~~~~g~~t~hGp~~ 137 (327)
T 4h1h_A 114 SDITALATAIYTQTELITYSGAHF 137 (327)
T ss_dssp TTHHHHHHHHHHHHCBCEEECCCT
T ss_pred ccccHHHHHHHHhcCeEEEeCcch
Confidence 98888888875 57777776654
No 65
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=45.90 E-value=66 Score=29.93 Aligned_cols=75 Identities=15% Similarity=0.311 Sum_probs=59.1
Q ss_pred CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhc-cCCcceE
Q 011311 298 SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLA-HSAIGGF 376 (489)
Q Consensus 298 ~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~-~~~~~~~ 376 (489)
..+.+...++.+++.+..++.||.+++.- +-.++.++++...+-. +|.. |
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy---------------------------ga~rlLp~LD~~~i~~a~PK~--~ 113 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGY---------------------------GCGQLLPGLDWGRLQAASPRP--L 113 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSS---------------------------CGGGGTTTCCHHHHHHSCCCC--E
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCc---------------------------CHHHHhhccchhhhhccCCCE--E
Confidence 33456688899999999999999988762 1235667777777776 8888 9
Q ss_pred EecCCchhHHHHHH-hCCcEEeccCc
Q 011311 377 VSHCGWNSILESVW-FGVPIVTWPIY 401 (489)
Q Consensus 377 i~HgG~~s~~eal~-~GvP~v~~P~~ 401 (489)
|-+.-...++-+++ .|++.+-=|+.
T Consensus 114 iGySDiTaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 114 IGFSDISVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp EECGGGHHHHHHHHHTTCCEEECCCG
T ss_pred EEEchhHHHHHHHHHcCCcEEECHhh
Confidence 99999999999987 49998888864
No 66
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=45.73 E-value=52 Score=31.03 Aligned_cols=73 Identities=12% Similarity=0.187 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEec
Q 011311 300 GEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSH 379 (489)
Q Consensus 300 ~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~H 379 (489)
+.+...++.+++....++.||.+++.- +-.++.++++...|-.+|.. ||-+
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------------------------g~~rlL~~lD~~~i~~~PK~--~~Gy 114 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGM---------------------------NSNSLLPYIDYDAFQNNPKI--MIGY 114 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS---------------------------CGGGGGGGSCHHHHHHSCCE--EEEC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc---------------------------cHHHHhhhcChhHHhhCCeE--EEEe
Confidence 445688899999999999999988762 22366777887777778888 9999
Q ss_pred CCchhHHHHHH--hCCcEEeccCc
Q 011311 380 CGWNSILESVW--FGVPIVTWPIY 401 (489)
Q Consensus 380 gG~~s~~eal~--~GvP~v~~P~~ 401 (489)
.-...++-+++ .|+..+-=|+.
T Consensus 115 SDiTaL~~al~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 115 SDATALLLGIYAKTGIPTFYGPAL 138 (336)
T ss_dssp GGGHHHHHHHHHHHCCCEEECCCH
T ss_pred chHHHHHHHHHHhcCceEEECChh
Confidence 99999999987 59999988874
No 67
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=43.34 E-value=99 Score=27.69 Aligned_cols=30 Identities=27% Similarity=0.317 Sum_probs=21.8
Q ss_pred CCeeEEEe----------CCCCchHHHH---HHHhCCCeEEEe
Q 011311 125 VKIAGLVL----------DFFCSSMIDT---ANELGVPSYVFF 154 (489)
Q Consensus 125 ~~~D~VI~----------D~~~~~~~~v---A~~lgiP~v~~~ 154 (489)
.+||+||+ |.++++++.+ |..+|||.+.++
T Consensus 84 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S 126 (251)
T 2wqk_A 84 KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFS 126 (251)
T ss_dssp CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEE
Confidence 58999997 5556655444 446899999885
No 68
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=42.55 E-value=1.3e+02 Score=24.65 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
++++|++.+.++-+|-....-++..| ..+| ++|.++...
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l--~~~G--------~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARAL--RDAG--------FEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHH--HHTT--------CEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHH--HHCC--------CEEEECCCC
Confidence 36789999999999999999999999 9999 889988644
No 69
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=40.63 E-value=31 Score=30.12 Aligned_cols=40 Identities=10% Similarity=0.182 Sum_probs=34.7
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
|.++.+|++.-.++.|-+. ...|.+.| .++| ++|.++.++
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L--~~~g--------~eV~vv~T~ 40 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCL--VQEE--------REVHFLISK 40 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHH--HHTT--------CEEEEEECH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHH--HHCC--------CEEEEEECc
Confidence 5566799999999999888 89999999 9999 779999776
No 70
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=39.90 E-value=34 Score=27.45 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=34.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
+++|++.+.++-+|-....-++..| ..+| ++|..+...
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l--~~~G--------~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAF--TNAG--------FNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHH--HHTT--------CEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHH--HHCC--------CEEEECCCC
Confidence 5789999999999999999999999 9999 889988654
No 71
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=38.83 E-value=64 Score=24.39 Aligned_cols=35 Identities=29% Similarity=0.529 Sum_probs=29.5
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCC
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKT 325 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~ 325 (489)
+.|||.|.| +++.+.++++.+...|.+++..+...
T Consensus 2 sqifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 2 SQIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp CEEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ceEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 357888865 78899999999999999999988754
No 72
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=38.68 E-value=31 Score=30.42 Aligned_cols=146 Identities=12% Similarity=0.073 Sum_probs=71.9
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhh-cCCCccccccC
Q 011311 285 ASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERS-KGRGMICGWAP 363 (489)
Q Consensus 285 ~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~v~~w~p 363 (489)
.++++.|+.|.+ -...++.|.+.|..+.++-... .+.+.... .+++.++...-
T Consensus 31 gk~VLVVGgG~v-------a~~ka~~Ll~~GA~VtVvap~~-------------------~~~l~~l~~~~~i~~i~~~~ 84 (223)
T 3dfz_A 31 GRSVLVVGGGTI-------ATRRIKGFLQEGAAITVVAPTV-------------------SAEINEWEAKGQLRVKRKKV 84 (223)
T ss_dssp TCCEEEECCSHH-------HHHHHHHHGGGCCCEEEECSSC-------------------CHHHHHHHHTTSCEEECSCC
T ss_pred CCEEEEECCCHH-------HHHHHHHHHHCCCEEEEECCCC-------------------CHHHHHHHHcCCcEEEECCC
Confidence 346787766643 3456677777888877664321 11221111 12333332222
Q ss_pred HHHHhccCCcceEEecCCchhHHHHHHh----CCcEEeccCcchhhHHHHHH----HHhhCeEEEeeeccccCCCCccCH
Q 011311 364 QKEVLAHSAIGGFVSHCGWNSILESVWF----GVPIVTWPIYAEQQINAFQM----VRDLGLAVELRLDYRRGTENHVMA 435 (489)
Q Consensus 364 q~~iL~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~v----~~~~G~G~~l~~~~~~~~~~~~~~ 435 (489)
+...|..+++ +|.--|--.+.+.++. |+|+-+ .|.+..+..+ +++-++-+.+... +. ...-+
T Consensus 85 ~~~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg~l~iaIST~---G~-sP~la 154 (223)
T 3dfz_A 85 GEEDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRGRLSLAISTD---GA-SPLLT 154 (223)
T ss_dssp CGGGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEETTEEEEEECT---TS-CHHHH
T ss_pred CHhHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeCCEEEEEECC---CC-CcHHH
Confidence 3345667777 8887777666555543 555332 3444333211 1111333444332 11 13445
Q ss_pred HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHH
Q 011311 436 DELARAVGCVMDGD-SEVRKRVKEVSEKARLA 466 (489)
Q Consensus 436 ~~l~~ai~~vl~~~-~~~~~~a~~l~~~~~~~ 466 (489)
..|++.|++.+..+ ..+-+.+.++.+.+++.
T Consensus 155 ~~iR~~ie~~lp~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 155 KRIKEDLSSNYDESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHSCTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888521 35556666666666553
No 73
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=38.33 E-value=16 Score=37.13 Aligned_cols=38 Identities=11% Similarity=0.230 Sum_probs=28.0
Q ss_pred CcEEEEEcC--------CCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCC
Q 011311 4 KAELVFIPS--------PSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEH 53 (489)
Q Consensus 4 ~~~i~~~~~--------~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~ 53 (489)
++||+++++ ++.|++ .-+|+++| +++| |+|+++++...
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL--~~~G--------~~V~Vi~P~Y~ 54 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAM--AANG--------HRVMVISPRYD 54 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHH--HHHHHHHH--HTTT--------CEEEEEEECCS
T ss_pred CcEEEEEEEeccchhccCcHHHH--HHHHHHHH--HHcC--------CeEEEEecCch
Confidence 456999963 444444 56889999 9999 66999987643
No 74
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=38.07 E-value=42 Score=29.60 Aligned_cols=29 Identities=14% Similarity=0.190 Sum_probs=24.8
Q ss_pred cCCcceEEecCCchhHHHHHHhCCcEEeccCc
Q 011311 370 HSAIGGFVSHCGWNSILESVWFGVPIVTWPIY 401 (489)
Q Consensus 370 ~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~ 401 (489)
.+++ +|+.||-...+..- .++|+|-++..
T Consensus 63 ~~dV--IISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 63 RCDA--IIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CCSE--EEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CCeE--EEeCChHHHHHHhh-CCCCEEEecCC
Confidence 3666 99999999999975 58999999985
No 75
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=37.37 E-value=77 Score=30.28 Aligned_cols=74 Identities=12% Similarity=0.152 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEe
Q 011311 299 FGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVS 378 (489)
Q Consensus 299 ~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~ 378 (489)
.+.+...++.+++....++.||.+++.- +-.++.++++...|-.+|.. ||-
T Consensus 93 td~~Ra~dL~~af~Dp~i~aI~~~rGGy---------------------------ga~rlLp~LD~~~i~~~PK~--fiG 143 (371)
T 3tla_A 93 TIKERAQEFNELVYNPDITCIMSTIGGD---------------------------NSNSLLPFLDYDAIIANPKI--IIG 143 (371)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEESCCCS---------------------------CGGGGGGGSCHHHHHHSCCE--EEE
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc---------------------------cHHHHHhhcChhhHHhCCcE--EEE
Confidence 3455688899999999999999988762 22366777887777778887 999
Q ss_pred cCCchhHHHHHH--hCCcEEeccCc
Q 011311 379 HCGWNSILESVW--FGVPIVTWPIY 401 (489)
Q Consensus 379 HgG~~s~~eal~--~GvP~v~~P~~ 401 (489)
..-...++-|++ .|++.+-=|+.
T Consensus 144 ySDiTaL~~ai~~k~Gl~T~hGP~~ 168 (371)
T 3tla_A 144 YSDTTALLAGIYAKTGLITFYGPAL 168 (371)
T ss_dssp CGGGHHHHHHHHHHHCBCEEECCCH
T ss_pred echHHHHHHHHHHHcCCEEEECccc
Confidence 999988888876 59999887764
No 76
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=36.72 E-value=1.2e+02 Score=25.26 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=28.9
Q ss_pred EEEEE-cCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 6 ELVFI-PSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 6 ~i~~~-~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
.|++. +-++.|=.+-...||..| +++| .+|.++-..
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~l--a~~g--------~~vlliD~D 39 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATAL--SRSG--------YNIAVVDTD 39 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHH--HHTT--------CCEEEEECC
T ss_pred EEEEEeCCCCccHHHHHHHHHHHH--HHCC--------CeEEEEECC
Confidence 34444 457899999999999999 9999 669888654
No 77
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=36.28 E-value=1.1e+02 Score=26.16 Aligned_cols=38 Identities=11% Similarity=0.173 Sum_probs=32.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
+..|.+++..+.|-.+-.+.+|.+. +.+| ++|.|+.+-
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA--~g~G--------~rV~~vQF~ 65 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARA--VGHG--------KNVGVVQFI 65 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHH--HHTT--------CCEEEEESS
T ss_pred CceEEEECCCCCCHHHHHHHHHHHH--HHCC--------CeEEEEEee
Confidence 3468899999999999999999999 8888 779999653
No 78
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=36.10 E-value=87 Score=29.59 Aligned_cols=26 Identities=23% Similarity=0.340 Sum_probs=21.2
Q ss_pred cCCcceEEecCCchhH---HHHHHhCCcEEe
Q 011311 370 HSAIGGFVSHCGWNSI---LESVWFGVPIVT 397 (489)
Q Consensus 370 ~~~~~~~i~HgG~~s~---~eal~~GvP~v~ 397 (489)
+|++ +|++||.-|. ..|-..|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 6777 9999998765 567778999986
No 79
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=36.01 E-value=22 Score=37.54 Aligned_cols=115 Identities=9% Similarity=0.089 Sum_probs=79.2
Q ss_pred cccCHHHHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeec-cccCCCCccCHHHH
Q 011311 360 GWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLD-YRRGTENHVMADEL 438 (489)
Q Consensus 360 ~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~-~~~~~~~~~~~~~l 438 (489)
++.+-.++|..+++ .||=-- ..+.|.+..+.|+|....-.|++..- .+ |. ..+.. +.-+. -.-+.++|
T Consensus 605 ~~~di~~ll~~aD~--lITDyS-Sv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g~--y~d~~~~~pg~-~~~~~~eL 673 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDYS-SVMFDYGILKRPQFFFAYDIDKYDKG----LR-GF--YMNYMEDLPGP-IYTEPYGL 673 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESSC-THHHHHGGGCCCEEEECTTTTTTTSS----CC-SB--SSCTTSSSSSC-EESSHHHH
T ss_pred CCcCHHHHHHHhCE--EEeech-HHHHhHHhhCCCEEEecCCHHHHhhc----cC-Cc--ccChhHhCCCC-eECCHHHH
Confidence 56677889999998 999864 56889999999999988777766431 12 32 22211 00000 13578899
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 439 ARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 439 ~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
.++|......+..|+++.++..+.+-.. .+|.++.+.++.+++....
T Consensus 674 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~ 720 (729)
T 3l7i_A 674 AKELKNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKE 720 (729)
T ss_dssp HHHHTTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcC
Confidence 9999877753357777777777766553 7788999999998887663
No 80
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=35.79 E-value=53 Score=30.42 Aligned_cols=32 Identities=9% Similarity=0.199 Sum_probs=24.6
Q ss_pred HhccCCcceEEecCCchhHHHHHHh----CCcEEeccC
Q 011311 367 VLAHSAIGGFVSHCGWNSILESVWF----GVPIVTWPI 400 (489)
Q Consensus 367 iL~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~ 400 (489)
....+++ +|.-||=||+++++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 4446677 9999999999999754 899999885
No 81
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=34.83 E-value=73 Score=27.82 Aligned_cols=33 Identities=6% Similarity=0.029 Sum_probs=24.7
Q ss_pred HhccCCcceEEecCCchhHHHHH---------HhCCcEEeccC
Q 011311 367 VLAHSAIGGFVSHCGWNSILESV---------WFGVPIVTWPI 400 (489)
Q Consensus 367 iL~~~~~~~~i~HgG~~s~~eal---------~~GvP~v~~P~ 400 (489)
+...++. .++--||.||+-|.. .+++|++.+-.
T Consensus 102 ~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 102 MAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp HHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred HHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4445554 577789999988876 47999999864
No 82
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.31 E-value=35 Score=29.35 Aligned_cols=30 Identities=7% Similarity=0.182 Sum_probs=25.3
Q ss_pred cCCcceEEecCCchhHHHHHHhCCcEEeccCcc
Q 011311 370 HSAIGGFVSHCGWNSILESVWFGVPIVTWPIYA 402 (489)
Q Consensus 370 ~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 402 (489)
.+++ +|+.||-...+... .++|+|-++..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4566 99999999999975 689999999864
No 83
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=33.22 E-value=69 Score=28.89 Aligned_cols=31 Identities=23% Similarity=0.229 Sum_probs=21.5
Q ss_pred CCeeEEEe----------CCCCchHHHHHH---HhCCCeEEEec
Q 011311 125 VKIAGLVL----------DFFCSSMIDTAN---ELGVPSYVFFT 155 (489)
Q Consensus 125 ~~~D~VI~----------D~~~~~~~~vA~---~lgiP~v~~~~ 155 (489)
.+||+||+ |.++++++.+|. .+|||.+.++.
T Consensus 92 ~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 92 EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 48999996 445555555544 57999998864
No 84
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=33.01 E-value=20 Score=34.95 Aligned_cols=37 Identities=8% Similarity=0.271 Sum_probs=28.1
Q ss_pred cEEEEEcCCCc-----cCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 5 AELVFIPSPSV-----GHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 5 ~~i~~~~~~~~-----GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
++|++++.... |=.+....+|++| +++| |+|++++..
T Consensus 47 mrI~~v~~~~~p~~~~GG~~~v~~la~~L--~~~G--------heV~Vvt~~ 88 (413)
T 2x0d_A 47 KRLNLLVPSINQEHMFGGISTALKLFEQF--DNKK--------FKKRIILTD 88 (413)
T ss_dssp CEEEEEESCCCGGGCSHHHHHHHHHHTTS--CTTT--------CEEEEEESS
T ss_pred ceEEEEeCCCCccccccHHHHHHHHHHHH--HHcC--------CceEEEEec
Confidence 45888775422 4345689999999 9999 669999875
No 85
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=32.75 E-value=1.5e+02 Score=25.46 Aligned_cols=49 Identities=12% Similarity=-0.022 Sum_probs=34.4
Q ss_pred hhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEE
Q 011311 273 RDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWS 321 (489)
Q Consensus 273 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~ 321 (489)
.+-+.+|+.+-..+.++||..+|......+.+..+.++|++.|..+.+.
T Consensus 15 ~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 15 VPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 3445667644334569999988854344566888999999999986653
No 86
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=32.59 E-value=1.4e+02 Score=23.35 Aligned_cols=59 Identities=12% Similarity=0.138 Sum_probs=36.7
Q ss_pred hCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011311 391 FGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVS 460 (489)
Q Consensus 391 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~ 460 (489)
..+|+|++--..+..... ...+. |+--.+.+ .++.++|..+|+.++. ...++...+++.
T Consensus 74 ~~~pii~ls~~~~~~~~~-~~~~~-g~~~~l~k--------P~~~~~L~~~i~~~~~-~~~~~~~~~~~~ 132 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMAV-QAIQD-GAYDFIAK--------PFAADRLVQSARRAEE-KRRLVMENRSLR 132 (155)
T ss_dssp TTSCEEEEECGGGHHHHH-HHHHT-TCCEEEES--------SCCHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHH-HHHhc-CCCeEEeC--------CCCHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 478998886665543333 33344 76555542 6899999999999987 334433333333
No 87
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=31.06 E-value=76 Score=26.23 Aligned_cols=32 Identities=19% Similarity=0.290 Sum_probs=25.7
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhcC-CeEE
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKSG-VRFL 319 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~~-~~~v 319 (489)
.+|+++||....+...+...++.|.+.+ .+++
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~ 35 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLPRSRLV 35 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCTTEEEE
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCCCCceE
Confidence 5899999988778888999999998864 4443
No 88
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=30.12 E-value=2.3e+02 Score=23.29 Aligned_cols=139 Identities=18% Similarity=0.195 Sum_probs=72.5
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHH
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEV 367 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~i 367 (489)
.|-|-.||.. +.+..++....|+..|.++=..+-... .+|+.+. +|+.+.+
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saH----------------R~p~~~~----------~~~~~a~- 54 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAH----------------KTAEHVV----------SMLKEYE- 54 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT----------------TCHHHHH----------HHHHHHH-
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEccc----------------CCHHHHH----------HHHHHhh-
Confidence 4556677733 567788888889999987654443321 1333211 1111111
Q ss_pred hccCCcceEEecCCchhHHHHHH---hCCcEEeccCcchh---h-HHHHHHHHh-hCeEEEeeeccccCCCCccCHHHHH
Q 011311 368 LAHSAIGGFVSHCGWNSILESVW---FGVPIVTWPIYAEQ---Q-INAFQMVRD-LGLAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 368 L~~~~~~~~i~HgG~~s~~eal~---~GvP~v~~P~~~DQ---~-~na~~v~~~-~G~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
.+-..++||.=.|...-+-++. .-+|+|.+|...-. . .++ +++. -|+.+.- .+ +-.++.-++
T Consensus 55 -~~~~~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dLlS--~vqmp~GvpVat-v~------~~~nAa~lA 124 (159)
T 3rg8_A 55 -ALDRPKLYITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGADIYS--SLRMPSGISPAL-VL------EPKNAALLA 124 (159)
T ss_dssp -TSCSCEEEEEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTHHHH--HHCCCTTCCCEE-CC------SHHHHHHHH
T ss_pred -hcCCCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCccHHH--HHhCCCCCceEE-ec------CchHHHHHH
Confidence 1102334888777543333322 45899999964211 1 222 2221 1554321 11 244555555
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q 011311 440 RAVGCVMDGDSEVRKRVKEVSEKARLAL 467 (489)
Q Consensus 440 ~ai~~vl~~~~~~~~~a~~l~~~~~~~~ 467 (489)
..|.. +. |+.++++.+..++..++.+
T Consensus 125 ~~Il~-~~-d~~l~~kl~~~r~~~~~~v 150 (159)
T 3rg8_A 125 ARIFS-LY-DKEIADSVKSYMESNAQKI 150 (159)
T ss_dssp HHHHT-TT-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-CC-CHHHHHHHHHHHHHHHHHH
Confidence 54432 23 6788888888877776654
No 89
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=29.77 E-value=66 Score=26.58 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=24.6
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhcC-CeEE
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKSG-VRFL 319 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~~-~~~v 319 (489)
.+|+++||....+...+...+++|.+.+ .+++
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~ 34 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPESHIL 34 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCCCCcee
Confidence 5899999977656677888889998764 4544
No 90
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=29.42 E-value=38 Score=33.29 Aligned_cols=35 Identities=11% Similarity=0.096 Sum_probs=26.5
Q ss_pred EEEEcCC------CccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 7 LVFIPSP------SVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 7 i~~~~~~------~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
|++++.. .-|=-.-...|+++| +++| |+|+++++.
T Consensus 3 Il~v~~~~~P~~~~GG~~~~~~~la~~L--~~~G--------~~V~vi~~~ 43 (485)
T 2qzs_A 3 VLHVCSEMFPLLKTGGLADVIGALPAAQ--IADG--------VDARVLLPA 43 (485)
T ss_dssp EEEECSCBTTTBCSSHHHHHHHHHHHHH--HHTT--------CEEEEEEEC
T ss_pred EEEEeeeccccccCCcHHHHHHHHHHHH--HHcC--------CEEEEEecC
Confidence 8888752 223346677899999 9999 669999865
No 91
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=28.50 E-value=2.1e+02 Score=24.98 Aligned_cols=46 Identities=24% Similarity=0.195 Sum_probs=32.9
Q ss_pred hhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEE
Q 011311 273 RDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLW 320 (489)
Q Consensus 273 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw 320 (489)
.+.+.+|+.. ...++||..|+........+..+.++|++.|..++.
T Consensus 21 ~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 21 LPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 5567888864 346999998875333345577899999999987653
No 92
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=27.69 E-value=1.3e+02 Score=23.12 Aligned_cols=61 Identities=13% Similarity=0.038 Sum_probs=44.5
Q ss_pred cCCcceEEecCCchh---------HHHHHHhCCcEEeccCcchh--hHHHHHHHHhhCeEEEeeeccccCCCCccCHHHH
Q 011311 370 HSAIGGFVSHCGWNS---------ILESVWFGVPIVTWPIYAEQ--QINAFQMVRDLGLAVELRLDYRRGTENHVMADEL 438 (489)
Q Consensus 370 ~~~~~~~i~HgG~~s---------~~eal~~GvP~v~~P~~~DQ--~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l 438 (489)
.+++ +|--+|..| +..|...|+|+|++=.++.+ |.. +.+. +.-+. ..+.+.|
T Consensus 38 ~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~P~~---l~~~-a~~iV-----------~Wn~~~I 100 (111)
T 1eiw_A 38 DADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENVPPE---LEAV-SSEVV-----------GWNPHCI 100 (111)
T ss_dssp SCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCCCTT---HHHH-CSEEE-----------CSCHHHH
T ss_pred cCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcCCHH---HHhh-Cceec-----------cCCHHHH
Confidence 4666 888999888 66788899999998877765 332 3333 43332 5788999
Q ss_pred HHHHHHHhc
Q 011311 439 ARAVGCVMD 447 (489)
Q Consensus 439 ~~ai~~vl~ 447 (489)
.++|+..++
T Consensus 101 ~~aI~~~~~ 109 (111)
T 1eiw_A 101 RDALEDALD 109 (111)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHhccC
Confidence 999988765
No 93
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=27.68 E-value=99 Score=21.55 Aligned_cols=54 Identities=9% Similarity=0.092 Sum_probs=31.3
Q ss_pred CccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH-hcC-CChHHHHHHHHHHH
Q 011311 431 NHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLAL-RDG-GSSYAATGRLIEDL 484 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~-~~~-g~~~~~~~~~~~~~ 484 (489)
+..|.++|.++|+++|.+-.-..--.+++.+++.+.. +-. ......|++.|...
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL~tvT~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~ 65 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLTERKDFIKTTVKEL 65 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHCSSSCCSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHccCCCChHHHHHHHHHHHHH
Confidence 3689999999999999732211122244555555554 323 22334666666654
No 94
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=27.43 E-value=51 Score=32.04 Aligned_cols=45 Identities=18% Similarity=0.265 Sum_probs=33.7
Q ss_pred HHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEE
Q 011311 276 IIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLW 320 (489)
Q Consensus 276 l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw 320 (489)
..+|-...+.+.-|.|-++|+...+....+.++++|.+.|..++.
T Consensus 255 Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 255 YVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp HHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 445665544444566779999877777788899999999998764
No 95
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=27.10 E-value=80 Score=26.16 Aligned_cols=33 Identities=21% Similarity=0.217 Sum_probs=24.8
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhhc-CCeEE
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEKS-GVRFL 319 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~v 319 (489)
..+|+++||....+...+...+..|.+. +.+++
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~~~~~v~ 38 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEYDGISVS 38 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHSTTEEEE
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcCCCCceE
Confidence 3699999997765667788888888874 44544
No 96
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=27.09 E-value=78 Score=26.13 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=23.6
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhc-CCeEE
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKS-GVRFL 319 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~v 319 (489)
+.|+++||....+.+.+...+..|.+. +..++
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~~~~v~ 34 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPESHIL 34 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCCCCcEE
Confidence 579999997765666788888888875 44443
No 97
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=26.97 E-value=74 Score=26.32 Aligned_cols=32 Identities=13% Similarity=0.252 Sum_probs=24.3
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhc-CCeEE
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKS-GVRFL 319 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~v 319 (489)
.+|+++||....+.+.+...++.|.+. +.+++
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~ 35 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLSNTHLV 35 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCCCCcce
Confidence 589999998766667788888999875 34443
No 98
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.30 E-value=88 Score=22.19 Aligned_cols=48 Identities=19% Similarity=0.190 Sum_probs=32.1
Q ss_pred hCCcEEeccCcchhhHHHHH---HHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhc
Q 011311 391 FGVPIVTWPIYAEQQINAFQ---MVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMD 447 (489)
Q Consensus 391 ~GvP~v~~P~~~DQ~~na~~---v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~ 447 (489)
.|.|++++--.+.|...... .... |+...+-. .-.+|++...+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlk--------stdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK--------STDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE--------CCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc--------cCCHHHHHHHHHHHHH
Confidence 78888887766655432221 1234 77776654 4689999999998874
No 99
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=24.16 E-value=39 Score=30.69 Aligned_cols=28 Identities=14% Similarity=0.169 Sum_probs=24.4
Q ss_pred CCcceEEecCCchhHHHHHHh------CCcEEeccC
Q 011311 371 SAIGGFVSHCGWNSILESVWF------GVPIVTWPI 400 (489)
Q Consensus 371 ~~~~~~i~HgG~~s~~eal~~------GvP~v~~P~ 400 (489)
+++ +|.=||=||+.+++.. ++|++++|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 455 9999999999999875 899999986
No 100
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=23.69 E-value=3.3e+02 Score=22.92 Aligned_cols=35 Identities=20% Similarity=0.217 Sum_probs=22.7
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEec
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLR 323 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~ 323 (489)
|.|-|-.||.. +.+..++....|+.+|.++=..+-
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~ 48 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIV 48 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 46666677733 556677777777777777544443
No 101
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=23.47 E-value=90 Score=28.01 Aligned_cols=38 Identities=13% Similarity=0.081 Sum_probs=34.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
+.+|++.+.++-.|-....-++..| ..+| ++|.++...
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L--~~~G--------~~Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALL--RANG--------YNVVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHH--HHTT--------CEEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHH--HHCC--------CEEEECCCC
Confidence 5789999999999999999999999 9999 889988755
No 102
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=22.67 E-value=60 Score=29.70 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=26.8
Q ss_pred HHhccCCcceEEecCCchhHHHHHHh----CCcEEeccC
Q 011311 366 EVLAHSAIGGFVSHCGWNSILESVWF----GVPIVTWPI 400 (489)
Q Consensus 366 ~iL~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~ 400 (489)
.+-..+++ +|.=||=||+.+++.. ++|+++++.
T Consensus 59 ~~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 59 EIGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred hcccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 34445677 9999999999999853 899999984
No 103
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=22.31 E-value=3.8e+02 Score=23.13 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=28.4
Q ss_pred cccccCHH-HHhccCCcceEEecCCchhHHHHHH---------hCCcEEeccC
Q 011311 358 ICGWAPQK-EVLAHSAIGGFVSHCGWNSILESVW---------FGVPIVTWPI 400 (489)
Q Consensus 358 v~~w~pq~-~iL~~~~~~~~i~HgG~~s~~eal~---------~GvP~v~~P~ 400 (489)
+...+++. .++..-+-+.++--||.||+-|... +++|++.+-.
T Consensus 95 ~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 95 AVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred ecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 34555543 3444333346778899999988762 4899998865
No 104
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=21.17 E-value=45 Score=29.99 Aligned_cols=29 Identities=21% Similarity=0.345 Sum_probs=25.0
Q ss_pred cCCcceEEecCCchhHHHHHHh---CCcEEeccC
Q 011311 370 HSAIGGFVSHCGWNSILESVWF---GVPIVTWPI 400 (489)
Q Consensus 370 ~~~~~~~i~HgG~~s~~eal~~---GvP~v~~P~ 400 (489)
.+++ +|+=||=||+++++.. ++|+++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~ 72 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA 72 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC
Confidence 4566 9999999999999877 899988874
No 105
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=21.06 E-value=1.2e+02 Score=25.76 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=30.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 6 ELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 6 ~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
||++.-.++.|-+ =...+.++| .++| ++|.++.++
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L--~~~g--------~~V~vv~T~ 37 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVL--EELD--------FSVDLVISR 37 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHH--HHTT--------CEEEEEECH
T ss_pred EEEEEEECHHHHH-HHHHHHHHH--HHCC--------CEEEEEECh
Confidence 7999999998855 578999999 9999 779999776
No 106
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=20.68 E-value=69 Score=25.01 Aligned_cols=29 Identities=14% Similarity=0.035 Sum_probs=20.3
Q ss_pred CCeeEEEeCCCCc--hHHHHHHH---hCCCeEEE
Q 011311 125 VKIAGLVLDFFCS--SMIDTANE---LGVPSYVF 153 (489)
Q Consensus 125 ~~~D~VI~D~~~~--~~~~vA~~---lgiP~v~~ 153 (489)
.+||+||.|..++ -+..+++. .++|.+.+
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 5899999999876 34555554 47886543
No 107
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=20.64 E-value=1.7e+02 Score=27.34 Aligned_cols=27 Identities=15% Similarity=0.042 Sum_probs=20.9
Q ss_pred cCCcceEEec--CCchhHHHHHHhCCcEEec
Q 011311 370 HSAIGGFVSH--CGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 370 ~~~~~~~i~H--gG~~s~~eal~~GvP~v~~ 398 (489)
++++ +|+| .+.....-|-..|+|.+.+
T Consensus 102 ~pD~--Vi~d~~~~~~~~~aA~~~giP~v~~ 130 (402)
T 3ia7_A 102 PPDL--VVYDVFPFIAGRLLAARWDRPAVRL 130 (402)
T ss_dssp CCSE--EEEESTTHHHHHHHHHHHTCCEEEE
T ss_pred CCCE--EEECchHHHHHHHHHHhhCCCEEEE
Confidence 5777 8877 5666677788899999886
No 108
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=20.58 E-value=5.3e+02 Score=24.30 Aligned_cols=29 Identities=10% Similarity=0.198 Sum_probs=17.5
Q ss_pred CeeEEEeCCCCc-hHHHHHHHhCCCeEEEe
Q 011311 126 KIAGLVLDFFCS-SMIDTANELGVPSYVFF 154 (489)
Q Consensus 126 ~~D~VI~D~~~~-~~~~vA~~lgiP~v~~~ 154 (489)
++|+|....... ....+++.+++|+++..
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~~~p~v~~~ 153 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRVNPAAKLVY 153 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHHCTTSEEEE
T ss_pred CCCEEEECCchHHHHHHHHHHhCCCEEEEE
Confidence 568776322221 12267888999988653
No 109
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=20.29 E-value=3.9e+02 Score=22.49 Aligned_cols=102 Identities=12% Similarity=0.090 Sum_probs=55.1
Q ss_pred hhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCCh-hhHhh
Q 011311 273 RDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPR-GFQER 351 (489)
Q Consensus 273 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~-~~~~~ 351 (489)
-.++-++|.+. ....|+-|.- ........++..+.|-++|=++.... .. .....
T Consensus 22 A~~lg~~La~~---g~~lV~GGg~----~GiM~aa~~gA~~~gG~~iGv~p~~l------------------~~~e~~~~ 76 (191)
T 1t35_A 22 AAELGVYMAEQ---GIGLVYGGSR----VGLMGTIADAIMENGGTAIGVMPSGL------------------FSGEVVHQ 76 (191)
T ss_dssp HHHHHHHHHHT---TCEEEECCCC----SHHHHHHHHHHHTTTCCEEEEEETTC------------------CHHHHTTC
T ss_pred HHHHHHHHHHC---CCEEEECCCc----ccHHHHHHHHHHHcCCeEEEEeCchh------------------cccccccC
Confidence 34566677664 3556665542 12345566666666767666554321 00 00000
Q ss_pred hcCCCccccccCHH-HHh-ccCCcceEEecCCchhHHHH---H------HhCCcEEeccC
Q 011311 352 SKGRGMICGWAPQK-EVL-AHSAIGGFVSHCGWNSILES---V------WFGVPIVTWPI 400 (489)
Q Consensus 352 ~~~~~~v~~w~pq~-~iL-~~~~~~~~i~HgG~~s~~ea---l------~~GvP~v~~P~ 400 (489)
--.+.+++...+.. .++ ..++ ..++--||.||+-|. + .+++|++.+-.
T Consensus 77 ~~~~~~~~~~~~~Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 77 NLTELIEVNGMHERKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp CCSEEEEESHHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred CCCccccCCCHHHHHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 00112333445543 343 4444 467889999998775 4 37899999864
No 110
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=20.19 E-value=1.4e+02 Score=25.37 Aligned_cols=41 Identities=17% Similarity=0.038 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechh
Q 011311 111 CIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSG 157 (489)
Q Consensus 111 ~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~ 157 (489)
..+..+.++.+ .++++||.|. .+..+|+++|+|.+.+.+..
T Consensus 130 e~~~~i~~l~~---~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 130 EITTLISKVKT---ENIKIVVSGK---TVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GHHHHHHHHHH---TTCCEEEECH---HHHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHH---CCCeEEECCH---HHHHHHHHcCCcEEEEecCH
Confidence 34556666654 5899999985 35788999999988876633
No 111
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=20.05 E-value=3.9e+02 Score=22.39 Aligned_cols=64 Identities=20% Similarity=0.357 Sum_probs=37.8
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKM 86 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~ 86 (489)
|+++..+...+-.....+++.+ ++.| ++|.++.......+.. ...+.+.. ....+.+++.+|..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~l--k~~g--------i~v~~Ig~G~~~~~~~-l~~la~~~-----n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRM--KKNN--------VAIDIIHIGELQNESA-LQHFIDAA-----NSSDSCHLVSIPPS 173 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHH--HHTT--------EEEEEEEESCC---CH-HHHHHHHH-----CSTTCCEEEEECCC
T ss_pred EEEEECCCCCCchhHHHHHHHH--HHCC--------CEEEEEEeCCCCccHH-HHHHHHhc-----cCCCceEEEEecCc
Confidence 4555555555677888999999 9999 8888876553200111 22333332 12346777777754
No 112
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=20.02 E-value=4.8e+02 Score=23.47 Aligned_cols=27 Identities=7% Similarity=-0.050 Sum_probs=22.7
Q ss_pred CCCHHHHHHHHHHHhhcCCeEEEEecC
Q 011311 298 SFGEEQIQEIASGLEKSGVRFLWSLRK 324 (489)
Q Consensus 298 ~~~~~~~~~~~~al~~~~~~~vw~~~~ 324 (489)
.++.++..+++++|.+.|.+.|-....
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~ 48 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSF 48 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEEC
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccC
Confidence 468889999999999999998876543
No 113
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=20.01 E-value=1.1e+02 Score=25.68 Aligned_cols=36 Identities=11% Similarity=0.129 Sum_probs=30.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
.||++.-.++.|=+. ...+.+.| +++| ++|.++.++
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L--~~~g--------~~V~vv~T~ 41 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIEL--KSKF--------DEVNVIAST 41 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHH--TTTC--------SEEEEEECT
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHH--HHCC--------CEEEEEECc
Confidence 578888888877765 88999999 9999 679998776
Done!