Query 011311
Match_columns 489
No_of_seqs 200 out of 1615
Neff 9.5
Searched_HMMs 13730
Date Mon Mar 25 05:30:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011311.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011311hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2acva1 c.87.1.10 (A:3-463) Tr 100.0 1.7E-55 1.2E-59 449.4 44.9 448 3-485 6-460 (461)
2 d2c1xa1 c.87.1.10 (A:7-456) UD 100.0 4.1E-55 3E-59 446.0 42.6 437 4-488 1-448 (450)
3 d2vcha1 c.87.1.10 (A:6-476) Hy 100.0 4.2E-54 3.1E-58 440.2 45.2 453 5-488 2-466 (471)
4 d2pq6a1 c.87.1.10 (A:8-480) (I 100.0 1.9E-54 1.4E-58 442.7 40.6 441 4-486 1-472 (473)
5 d1rrva_ c.87.1.5 (A:) TDP-vanc 100.0 2.5E-42 1.8E-46 345.1 29.4 383 1-484 1-399 (401)
6 d1iira_ c.87.1.5 (A:) UDP-gluc 100.0 1.2E-40 8.6E-45 332.3 27.5 375 1-486 1-400 (401)
7 d1pn3a_ c.87.1.5 (A:) TDP-epi- 100.0 6.7E-41 4.9E-45 333.5 18.7 363 1-487 1-390 (391)
8 d1f0ka_ c.87.1.2 (A:) Peptidog 99.9 3.1E-21 2.3E-25 187.7 25.8 118 352-487 229-350 (351)
9 d2bisa1 c.87.1.8 (A:1-437) Gly 98.6 1.5E-05 1.1E-09 77.5 28.3 91 354-461 309-410 (437)
10 d2iw1a1 c.87.1.8 (A:2-371) Lip 98.4 0.00032 2.3E-08 65.5 31.2 93 354-462 252-349 (370)
11 d1o6ca_ c.87.1.3 (A:) UDP-N-ac 98.1 0.00012 8.7E-09 69.8 19.2 110 353-485 255-367 (377)
12 d1v4va_ c.87.1.3 (A:) UDP-N-ac 97.9 0.00061 4.5E-08 64.6 20.6 164 285-485 194-363 (373)
13 d1f6da_ c.87.1.3 (A:) UDP-N-ac 97.9 0.00074 5.4E-08 64.0 21.2 106 354-482 263-371 (376)
14 d1rzua_ c.87.1.8 (A:) Glycogen 97.8 0.0019 1.4E-07 63.2 24.2 138 285-447 289-439 (477)
15 d2f9fa1 c.87.1.8 (A:2-167) Fir 97.7 4.5E-05 3.3E-09 63.7 8.2 93 353-460 66-163 (166)
16 d2bfwa1 c.87.1.8 (A:218-413) G 96.9 0.0061 4.5E-07 51.5 13.0 90 354-460 92-192 (196)
17 d1pswa_ c.87.1.7 (A:) ADP-hept 90.7 2.9 0.00021 37.2 15.3 105 280-398 174-286 (348)
18 d1uqta_ c.87.1.6 (A:) Trehalos 90.7 0.73 5.3E-05 43.7 11.2 108 357-487 334-453 (456)
19 d1xmpa_ c.23.8.1 (A:) N5-CAIR 67.3 12 0.00086 29.0 8.1 143 287-467 2-153 (155)
20 d1ccwa_ c.23.6.1 (A:) Glutamat 63.3 3.8 0.00028 31.3 4.5 49 4-68 3-51 (137)
21 d1j8yf1 a.24.13.1 (F:3-86) Sig 56.1 13 0.00094 25.4 5.8 51 436-486 3-53 (84)
22 d1qcza_ c.23.8.1 (A:) N5-CAIR 56.1 37 0.0027 26.2 9.3 144 289-468 4-154 (163)
23 d1u11a_ c.23.8.1 (A:) N5-CAIR 51.9 20 0.0014 27.8 6.9 146 287-468 3-155 (159)
24 d1j9ja_ c.106.1.1 (A:) SurE ho 51.7 16 0.0012 30.6 7.0 31 125-155 85-128 (247)
25 d1zl0a2 c.23.16.7 (A:3-169) LD 51.6 30 0.0022 26.9 8.1 75 298-401 59-135 (167)
26 d1efpb_ c.26.2.3 (B:) Small, b 50.1 65 0.0048 26.6 11.5 30 126-155 113-148 (246)
27 d1ozha2 c.36.1.5 (A:7-187) Cat 48.6 20 0.0014 28.4 6.8 27 373-399 68-100 (181)
28 d1p3da1 c.5.1.1 (A:11-106) UDP 45.7 11 0.00084 26.4 4.3 35 1-49 5-39 (96)
29 d1jx7a_ c.114.1.1 (A:) Hypothe 43.9 12 0.00091 27.1 4.4 28 16-51 16-43 (117)
30 d1o4va_ c.23.8.1 (A:) N5-CAIR 42.1 71 0.0051 24.7 10.0 142 288-469 2-152 (169)
31 d1qkka_ c.23.1.1 (A:) Transcri 41.0 44 0.0032 24.7 7.5 62 390-462 70-131 (140)
32 d1kzyc2 c.15.1.4 (C:1867-1972) 38.2 11 0.00081 26.9 3.0 27 126-152 50-77 (106)
33 d1ep3b2 c.25.1.3 (B:103-262) D 35.9 11 0.00082 29.0 3.2 35 4-50 8-42 (160)
34 d2r7ka1 c.30.1.8 (A:1-123) 5-f 34.7 58 0.0042 23.6 6.6 47 273-325 4-50 (123)
35 d1u7za_ c.72.3.1 (A:) Coenzyme 33.2 8.8 0.00064 31.8 2.1 37 5-51 7-55 (223)
36 d1j4aa1 c.2.1.4 (A:104-300) D- 33.1 51 0.0037 26.2 7.0 105 286-444 44-148 (197)
37 d1qzua_ c.34.1.1 (A:) 4'-phosp 32.4 27 0.002 27.6 5.0 40 1-51 1-41 (181)
38 d1l5xa_ c.106.1.1 (A:) SurE ho 31.8 52 0.0038 27.8 7.2 31 125-155 83-127 (276)
39 d1cbka_ d.58.30.1 (A:) 6-hydro 31.5 27 0.002 27.0 4.7 32 288-319 3-35 (160)
40 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 29.8 30 0.0022 23.7 4.2 82 7-151 4-88 (89)
41 d1efvb_ c.26.2.3 (B:) Small, b 29.2 28 0.002 29.2 4.8 30 126-155 113-148 (252)
42 d1f9ya_ d.58.30.1 (A:) 6-hydro 29.1 33 0.0024 26.4 4.8 31 288-318 2-33 (158)
43 d1kpga_ c.66.1.18 (A:) CmaA1 { 28.1 20 0.0014 30.8 3.7 40 379-418 70-111 (285)
44 d1wgwa_ a.24.13.1 (A:) Signal 27.2 61 0.0044 22.5 5.6 52 436-487 12-63 (99)
45 d2p90a1 c.56.8.1 (A:6-274) Hyp 27.0 1.6E+02 0.012 24.2 9.7 39 287-325 97-136 (269)
46 d1zpda2 c.36.1.5 (A:2-187) Pyr 27.0 56 0.0041 25.6 6.2 25 375-399 68-97 (186)
47 d1ls1a1 a.24.13.1 (A:1-88) Sig 26.8 38 0.0028 23.1 4.3 14 432-445 21-34 (88)
48 d1p3y1_ c.34.1.1 (1:) MrsD {Ba 26.4 1.4E+02 0.0099 23.2 9.5 141 287-446 8-182 (183)
49 d3clsc1 c.26.2.3 (C:1-262) Sma 25.5 34 0.0025 28.8 4.6 30 126-155 112-147 (262)
50 d2pjua1 c.92.3.1 (A:11-196) Pr 25.2 42 0.0031 26.5 4.9 30 370-402 51-80 (186)
51 d1t9ba2 c.36.1.5 (A:89-263) Ac 25.0 25 0.0018 27.5 3.5 29 369-399 66-100 (175)
52 d1j8yf2 c.37.1.10 (F:87-297) G 24.3 37 0.0027 27.5 4.5 39 4-52 11-50 (211)
53 d2f1ka2 c.2.1.6 (A:1-165) Prep 23.1 20 0.0015 27.5 2.5 30 1-49 1-30 (165)
54 d3bula2 c.23.6.1 (A:741-896) M 22.4 37 0.0027 26.0 3.9 50 3-68 5-54 (156)
55 d1vbga2 c.8.1.1 (A:383-517) Py 22.4 33 0.0024 25.6 3.5 26 128-153 64-91 (135)
56 d1ks9a2 c.2.1.6 (A:1-167) Keto 22.3 21 0.0016 27.1 2.5 32 1-51 1-32 (167)
57 d2ji7a2 c.36.1.5 (A:7-194) Oxa 22.2 25 0.0018 27.9 2.9 31 368-400 64-100 (188)
58 d7reqa2 c.23.6.1 (A:561-728) M 22.0 40 0.0029 26.2 4.1 39 3-51 36-74 (168)
59 d1q1va_ a.159.4.1 (A:) DEK C-t 21.7 60 0.0044 21.0 4.2 55 432-486 11-67 (70)
60 d1c0pa1 c.4.1.2 (A:999-1193,A: 21.5 30 0.0022 28.1 3.6 35 1-50 3-37 (268)
61 d1kpia_ c.66.1.18 (A:) CmaA2 { 21.4 33 0.0024 29.4 3.8 41 379-419 69-111 (291)
62 d1ps9a3 c.4.1.1 (A:331-465,A:6 21.3 30 0.0022 27.2 3.3 32 3-49 42-73 (179)
63 d1vmaa2 c.37.1.10 (A:82-294) G 21.3 45 0.0033 27.0 4.4 41 3-53 9-50 (213)
64 d2d1pa1 c.114.1.1 (A:1-128) tR 21.2 52 0.0038 24.0 4.4 26 7-34 5-31 (128)
65 d1vkza2 c.30.1.1 (A:4-93) Glyc 20.6 20 0.0015 24.8 1.7 23 1-34 1-23 (90)
66 d1fjha_ c.2.1.2 (A:) 3-alpha-h 20.5 40 0.0029 27.7 4.2 33 1-50 1-33 (257)
67 d2cyua1 a.9.1.1 (A:2-40) E3-bi 20.2 35 0.0026 19.3 2.5 33 408-442 5-37 (39)
68 d1sc6a1 c.2.1.4 (A:108-295) Ph 20.1 1.8E+02 0.013 22.3 9.3 102 286-443 45-147 (188)
69 d1h6za2 c.8.1.1 (A:406-537) Py 20.0 46 0.0033 24.6 3.8 27 127-153 64-92 (132)
No 1
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=100.00 E-value=1.7e-55 Score=449.43 Aligned_cols=448 Identities=50% Similarity=0.919 Sum_probs=327.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEE
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIG 82 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 82 (489)
+..||+|+|+|++||++|+++||++| ++|| |+++||++++... .......+..... ....+++|+.
T Consensus 6 ~~~hil~~p~P~~GH~~P~l~lA~~L--~~rG------H~V~vt~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~ 71 (461)
T d2acva1 6 KNSELIFIPAPGIGHLASALEFAKLL--TNHD------KNLYITVFCIKFP--GMPFADSYIKSVL----ASQPQIQLID 71 (461)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHH--HHTC------TTEEEEEEECCCT--TCCCCHHHHHHHH----CSCTTEEEEE
T ss_pred CCCeEEEecChhhhHHHHHHHHHHHH--HHCC------CCeEEEEEeCCcc--chhhhhhcccccc----cCCCCeeEEE
Confidence 35699999999999999999999999 9999 8866777776543 2222334444443 3456799999
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHHH
Q 011311 83 VPKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLG 162 (489)
Q Consensus 83 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 162 (489)
+++..+...+.......++..+.+...+.+++.++.+. ..++|+||+|.+..++..+|+.+++|++.+++.++....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~ 148 (461)
T d2acva1 72 LPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTIL---SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLS 148 (461)
T ss_dssp CCCCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHC---CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHH
T ss_pred CCCCCCchhhhhhcHHHHHHHHHHHHHHHHHHHHHHhc---cCCCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhH
Confidence 98776544444455566666667777777777777664 368999999999999999999999999999998776666
Q ss_pred HHhhccccCCCCc---ccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceEEecchhHhhHHHHHH
Q 011311 163 FVLHLPTRGGEEF---EESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGIIVNTFEELESHAVEY 239 (489)
Q Consensus 163 ~~~~~~~~~~~~~---~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~~~ 239 (489)
...+.+....... ..........+++......................+.+.........++..+++..++......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (461)
T d2acva1 149 LMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDA 228 (461)
T ss_dssp HHHHGGGSCTTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHH
T ss_pred HhhccccccccccccccccccccccccccccchhhhhhhhhhhccchhHHHHHHHHHhhhccccccccccccccchhhhh
Confidence 6555433211110 0000000011111100000011111111111133444555666778899999999998877766
Q ss_pred Hhhc-CCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCc-CCCHHHHHHHHHHHhhcCCe
Q 011311 240 LMKC-DGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMG-SFGEEQIQEIASGLEKSGVR 317 (489)
Q Consensus 240 ~~~~-~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~ 317 (489)
+.+. +..++++++||.+......... .....++++..|++..+...++|+++|+.. ..+.+.+.+++.+++..+++
T Consensus 229 ~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (461)
T d2acva1 229 LYDHDEKIPPIYAVGPLLDLKGQPNPK--LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVR 306 (461)
T ss_dssp HHHHCTTSCCEEECCCCCCSSCCCBTT--BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCE
T ss_pred hhhcccCCCCceeeccccccCCccCCC--ccccCcHHHHHHHhhCCccceeeeeccccccCCCHHHHHHHHHHHHhcCcc
Confidence 6653 3556799999987665422100 112456678899998877788888888875 56778899999999999999
Q ss_pred EEEEecCCCCCCCCCCCCCcccccccCChhhHh--hhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhCCcE
Q 011311 318 FLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQE--RSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPI 395 (489)
Q Consensus 318 ~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~ 395 (489)
++|+..... ...++++.+ ..++|+.++.|.||.++|.|+++++||||||+||++||+++||||
T Consensus 307 ~~~~~~~~~---------------~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~ 371 (461)
T d2acva1 307 FLWSNSAEK---------------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPI 371 (461)
T ss_dssp EEEECCCCG---------------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCE
T ss_pred EEEEeeccc---------------ccCCccchhhhccCCCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcCCCE
Confidence 999987652 234555443 346888999999999999999999999999999999999999999
Q ss_pred EeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHH
Q 011311 396 VTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYA 475 (489)
Q Consensus 396 v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 475 (489)
|++|+++||+.||+|+++++|+|+.++...+.+ ...+|+|+|+++|+++|++++.||+||++|++++|+++++||||.+
T Consensus 372 l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~-~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~~~gg~s~~ 450 (461)
T d2acva1 372 LTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKG-SDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLI 450 (461)
T ss_dssp EECCCSTTHHHHHHHHHHTSCCEEESCSSCCTT-CCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHH
T ss_pred EeCCcccchHHHHHHHHHHhCceEEeecccccc-CCccCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhcCCCchHH
Confidence 999999999999999888789999997652211 1258999999999999974567999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 011311 476 ATGRLIEDLF 485 (489)
Q Consensus 476 ~~~~~~~~~~ 485 (489)
++++||++++
T Consensus 451 ~~~~~~~~~~ 460 (461)
T d2acva1 451 SVGKLIDDIT 460 (461)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999986
No 2
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
Probab=100.00 E-value=4.1e-55 Score=446.03 Aligned_cols=437 Identities=23% Similarity=0.378 Sum_probs=310.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV 83 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l 83 (489)
.+||+|+|+|++||++|++.||++| ++|| |+ |||++.... ....+............+++..+
T Consensus 1 ~~hvl~~p~P~~gH~~p~l~la~~L--~~rG------H~--Vt~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 63 (450)
T d2c1xa1 1 NPHVAVLAFPFSTHAAPLLAVVRRL--AAAA------PH--AVFSFFSTS-------QSNASIFHDSMHTMQCNIKSYDI 63 (450)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHH--HHHC------TT--SEEEEEECH-------HHHHHHC-------CTTEEEEEC
T ss_pred CCEEEEECchhHhHHHHHHHHHHHH--HHCC------Cc--EEEEEccCc-------cchhhhhcccccccCCCceeeec
Confidence 4899999999999999999999999 9999 55 999875421 01112111101123456888888
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHHHH
Q 011311 84 PKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGF 163 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 163 (489)
+++.+............+..+.......+.+.+.+.+.....++|+||+|.++.++..+|+.+|+|++.+.+.++...+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~ 143 (450)
T d2c1xa1 64 SDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLST 143 (450)
T ss_dssp CCCCCTTCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHH
T ss_pred CCCCCcchhhccchHHHHHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEECCccHHHHHHHHHhCCCEEEEecCchhhhhh
Confidence 87765544333344443444443333333333333333334689999999999999999999999999998877765544
Q ss_pred HhhccccCC----CCcccCcCC-cccccCCCCCCCCCCCCcccccCCC--c-hHHHHHHHHhhhccceEEecchhHhhHH
Q 011311 164 VLHLPTRGG----EEFEESEAD-SADIFTYANPVPYRVLPSLCFNKHG--G-FSAFENFGRRFKETKGIIVNTFEELESH 235 (489)
Q Consensus 164 ~~~~~~~~~----~~~~~~~~~-~~~~Pgl~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~gi~~~s~~~l~~~ 235 (489)
....+.... ......... ....+... .......+........ . ...............++..+++.++...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 222 (450)
T d2c1xa1 144 HVYIDEIREKIGVSGIQGREDELLNFIPGMS-KVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDS 222 (450)
T ss_dssp HHTHHHHHHHHCSSCCTTCTTCBCTTSTTCT-TCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred hhcccccccccCCCccccccccccccCCccc-chhHhhhhhhhhcccchHHHHHHHHHHHhhhhcccccccccHHhhhhh
Confidence 332211100 000000000 00111111 0111111111111111 0 2223344556677788899999999887
Q ss_pred HHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcC
Q 011311 236 AVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSG 315 (489)
Q Consensus 236 ~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~ 315 (489)
....... ..|++..+||+...... ...+.++++..|+...+.+++||+++||......+++.+++.++++.+
T Consensus 223 ~~~~~~~--~~p~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~ 294 (450)
T d2c1xa1 223 LTNDLKS--KLKTYLNIGPFNLITPP------PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASR 294 (450)
T ss_dssp HHHHHHH--HSSCEEECCCHHHHC---------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHT
T ss_pred hhhhccc--cCCceeecCCccccCCC------CCCcchhhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcC
Confidence 7766665 56778888887654432 113456678899999888899999999999999999999999999999
Q ss_pred CeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhCCcE
Q 011311 316 VRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPI 395 (489)
Q Consensus 316 ~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~ 395 (489)
++|||++.... ...+|+++..+.+.|+.+..|+||.++|.|+++++||||||+||++||+++||||
T Consensus 295 ~~vl~~~~~~~--------------~~~l~~~~~~~~~~nv~~~~~~pq~~lL~hp~~~~fItHGG~~s~~eal~~GvP~ 360 (450)
T d2c1xa1 295 VPFIWSLRDKA--------------RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPL 360 (450)
T ss_dssp CCEEEECCGGG--------------GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCE
T ss_pred CeEEEEECCCc--------------cccCChhhhhhccccccccccCChHhhhccCceeEEEccCCccHHHHHHHcCCCE
Confidence 99999987542 3457888877888999999999999999999999999999999999999999999
Q ss_pred EeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHH---HHHHHHHHHHHHHHhcCCC
Q 011311 396 VTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVR---KRVKEVSEKARLALRDGGS 472 (489)
Q Consensus 396 v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~---~~a~~l~~~~~~~~~~~g~ 472 (489)
|++|+++||+.||+|+++.+|+|+.++.. ++|+++|.++|+++|+ |++|+ +||++|++..++++++|||
T Consensus 361 v~~P~~~DQ~~na~rv~~~~G~G~~l~~~-------~~t~~~l~~ai~~vL~-d~~y~~~~~r~~~l~~~~~~a~~~~gs 432 (450)
T d2c1xa1 361 ICRPFFGDQRLNGRMVEDVLEIGVRIEGG-------VFTKSGLMSCFDQILS-QEKGKKLRENLRALRETADRAVGPKGS 432 (450)
T ss_dssp EECCCSTTHHHHHHHHHHTSCCEEECGGG-------SCCHHHHHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHHTSTTCH
T ss_pred EecccccchHHHHHHHHHHcCcEEEecCC-------CcCHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999998766999999876 8999999999999999 77654 6888888888899999999
Q ss_pred hHHHHHHHHHHHhhCC
Q 011311 473 SYAATGRLIEDLFGSV 488 (489)
Q Consensus 473 ~~~~~~~~~~~~~~~~ 488 (489)
|.+++.++|+.+.|.+
T Consensus 433 s~~~~~~~~e~v~r~~ 448 (450)
T d2c1xa1 433 STENFITLVDLVSKPK 448 (450)
T ss_dssp HHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHhhhc
Confidence 9999999999999875
No 3
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=100.00 E-value=4.2e-54 Score=440.21 Aligned_cols=453 Identities=33% Similarity=0.541 Sum_probs=316.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhh-cCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEc
Q 011311 5 AELVFIPSPSVGHLVSVIVFAKRLLLLD-RDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGV 83 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~l~la~~L~~~~-rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l 83 (489)
+||+++|+|++||++|+++||++| ++ || |+|||+++... .. ...+.... .....++..+.+
T Consensus 2 ~hil~~p~p~~GH~~P~l~La~~L--~~~rG--------H~Vt~v~~~~~--~~----~~~~~~~~--~~~~~~~~~~~~ 63 (471)
T d2vcha1 2 PHVAIIPSPGMGHLIPLVEFAKRL--VHLHG--------LTVTFVIAGEG--PP----SKAQRTVL--DSLPSSISSVFL 63 (471)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHH--HHHHC--------CEEEEEECCSS--SC----C-CHHHHH--C-CCTTEEEEEC
T ss_pred CEEEEECchhHhHHHHHHHHHHHH--HHccC--------CEEEEEeCCCc--ch----hhhhhccc--ccCCCCcceeec
Confidence 699999999999999999999999 86 89 66999987632 11 11222110 012345777777
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCchHHHHHHHhCCCeEEEechhHHHHHH
Q 011311 84 PKMNPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCSSMIDTANELGVPSYVFFTSGAAFLGF 163 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 163 (489)
+...........+....+..+.......++.....+.+. ...+|+||.|.+..++..+++.+|+|++.+.+.++.....
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~ 142 (471)
T d2vcha1 64 PPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEG-GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSF 142 (471)
T ss_dssp CCCCCTTSCTTCCHHHHHHHHHHTTHHHHHHHHHHHHHT-TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred CcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcEEEEeccchHHHHHHHHhCCCcccccccchhhHHH
Confidence 755433333334555556666666666666666655542 3578999999999999999999999999998877665554
Q ss_pred HhhccccCC---CCcccCcCCcccccCCCCCCCCCCCCcccccCCC-chHHHHHHHHhhhccceEEecchhHhhHHHHHH
Q 011311 164 VLHLPTRGG---EEFEESEADSADIFTYANPVPYRVLPSLCFNKHG-GFSAFENFGRRFKETKGIIVNTFEELESHAVEY 239 (489)
Q Consensus 164 ~~~~~~~~~---~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~~~s~~~l~~~~~~~ 239 (489)
+.+.+.... ......... ..+|+.. ................ ................+...+.+...+......
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (471)
T d2vcha1 143 FLHLPKLDETVSCEFRELTEP-LMLPGCV-PVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKA 220 (471)
T ss_dssp HHHHHHHHHHCCSCGGGCSSC-BCCTTCC-CBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHH
T ss_pred hhcCcccccccCccccccccc-ccccccc-ccccccccccccccchHHHHHHHHHHHhhcccccccchhHHHHHHHHHhh
Confidence 433221110 000000000 1122211 1111111111111111 123344455566677788888888887766655
Q ss_pred Hhhc-CCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeE
Q 011311 240 LMKC-DGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRF 318 (489)
Q Consensus 240 ~~~~-~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 318 (489)
+... ...+++.+++++....... ......+++.+|++.....+++|+++|+.......++.++..++...+.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 295 (471)
T d2vcha1 221 LQEPGLDKPPVYPVGPLVNIGKQE-----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRF 295 (471)
T ss_dssp HHSCCTTCCCEEECCCCCCCSCSC-----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEE
T ss_pred cccccCCCCCccCcccccccCccc-----cccccchhHHHHHHhcCCccccccccccccCCCHHHHHHHHHHHHhhcCCe
Confidence 5542 2344577777765433311 123556789999999888899999999999888999999999999999999
Q ss_pred EEEecCCCCCCCCC--CCCCcccccccCChhhHhh-hcCCCccccccCHHHHhccCCcceEEecCCchhHHHHHHhCCcE
Q 011311 319 LWSLRKTPPKDRPE--MPGEYTCVEDILPRGFQER-SKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNSILESVWFGVPI 395 (489)
Q Consensus 319 vw~~~~~~~~~~~~--~~~~~~~~~~~lp~~~~~~-~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~ 395 (489)
+|.++......... ...........+|+++... .++|+++++|+||.+||.|+++++||||||+||++||+++||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~ 375 (471)
T d2vcha1 296 LWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPL 375 (471)
T ss_dssp EEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCE
T ss_pred EEEeccccccccccccccccccchhhhCCchhhhhccCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCE
Confidence 99998653221100 0111122345577776543 35789999999999999999999999999999999999999999
Q ss_pred EeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHHhcCCC
Q 011311 396 VTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDS---EVRKRVKEVSEKARLALRDGGS 472 (489)
Q Consensus 396 v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~---~~~~~a~~l~~~~~~~~~~~g~ 472 (489)
|++|+++||+.||+|+++.+|+|+.+... ++..+|+|+|++||+++|+ |+ +||+||++|++++++|+++|||
T Consensus 376 v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~----~~~~~t~~~l~~ai~~vl~-~~~~~~~r~ra~~l~e~~~~a~~~gG~ 450 (471)
T d2vcha1 376 IAWPLYAEQKMNAVLLSEDIRAALRPRAG----DDGLVRREEVARVVKGLME-GEEGKGVRNKMKELKEAACRVLKDDGT 450 (471)
T ss_dssp EECCCSTTHHHHHHHHHHTTCCEECCCCC----TTSCCCHHHHHHHHHHHHT-STHHHHHHHHHHHHHHHHHHHTSTTSH
T ss_pred EEcccccccHHHHHHHHHHheeEEEEecC----CCCcCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999998888999998754 1236999999999999998 54 5999999999999999999999
Q ss_pred hHHHHHHHHHHHhhCC
Q 011311 473 SYAATGRLIEDLFGSV 488 (489)
Q Consensus 473 ~~~~~~~~~~~~~~~~ 488 (489)
|.++|+.||+.+++.+
T Consensus 451 s~~~~~~~~~~~~~~~ 466 (471)
T d2vcha1 451 STKALSLVALKWKAHK 466 (471)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999753
No 4
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=100.00 E-value=1.9e-54 Score=442.68 Aligned_cols=441 Identities=27% Similarity=0.447 Sum_probs=310.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCC----CCCCCeE
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGA----TADVSIR 79 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 79 (489)
|+||+++|+|+.||++|+++||++| ++|| |+|||++++ .+.+.+..... .....++
T Consensus 1 ~~hvl~~p~p~~gH~~P~~~lA~~L--~~rG--------H~Vt~~~~~----------~~~~~i~~~~~~~~~~~~~~~~ 60 (473)
T d2pq6a1 1 KPHVVMIPYPVQGHINPLFKLAKLL--HLRG--------FHITFVNTE----------YNHKRLLKSRGPKAFDGFTDFN 60 (473)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHH--HHTT--------CEEEEEEEH----------HHHHHHC------------CEE
T ss_pred CCEEEEECchhhhHHHHHHHHHHHH--HHCC--------CeEEEEeCc----------chHhHHhhccCcccccCCCCcc
Confidence 6999999999999999999999999 9999 669999876 22333321000 1123577
Q ss_pred EEEcCCCCCCCC---CCCCChHHHHHHHHHHhhHHHHHHHHHHHhc-CCCCeeEEEeCCCCchHHHHHHHhCCCeEEEec
Q 011311 80 FIGVPKMNPPPL---DYFKSPEKFITEYVDSHKDCIKEAIIEHVLN-NNVKIAGLVLDFFCSSMIDTANELGVPSYVFFT 155 (489)
Q Consensus 80 f~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~D~VI~D~~~~~~~~vA~~lgiP~v~~~~ 155 (489)
+..++....... ........++..+...+...+.......... ....+|+||.|....+...+|+++++|++.+.+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~a~~~~~p~~~~~~ 140 (473)
T d2pq6a1 61 FESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFS 140 (473)
T ss_dssp EEEECCCCC---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEEC
T ss_pred eeecCCCCcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEecCcchhhHHHHHHhCCCceeecc
Confidence 777776543221 1113333444443333333344433333332 345789999999999999999999999999988
Q ss_pred hhHHHHHHHhhccccCCCC---c------cc--CcCCcccccCCCCCCCCCCCCcccccCCC---chHHHHHHHHhhhcc
Q 011311 156 SGAAFLGFVLHLPTRGGEE---F------EE--SEADSADIFTYANPVPYRVLPSLCFNKHG---GFSAFENFGRRFKET 221 (489)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~---~------~~--~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 221 (489)
..+.....+.+.+...... . .. ......++|++. ......+......... .+..+....+.++..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (473)
T d2pq6a1 141 SSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLK-NFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKD 219 (473)
T ss_dssp SCHHHHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCC-SCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTT
T ss_pred ccchhhhhhhcccccccccCCCccccccccccccccccccCCCcc-ccchhhhhhhhhhcchhHHHHHHHHHHHHHHHhh
Confidence 7766554443322111000 0 00 000002233322 1222223222222221 134555667778888
Q ss_pred ceEEecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCC---C---CCCCCCCCChhHHHHhhhcCCCCceEEEeecC
Q 011311 222 KGIIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDI---H---ARPRGGGTQRDEIIRWLDDQPASSVVFLCFGS 295 (489)
Q Consensus 222 ~gi~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~---~---~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS 295 (489)
++.+.+++.+.+......+.. ..+...+.++........ . .........+++...|+.......++|+++||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~gs 297 (473)
T d2pq6a1 220 TTILLNTFNELESDVINALSS--TIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGS 297 (473)
T ss_dssp CCEEESSCGGGGHHHHHHHHT--TCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCS
T ss_pred hcccccchhhhhHhHHHHHHh--cCCcccccCCccccCCCCCCccccccCCcccccccHHHHHHhhhcCCCceeeeccCc
Confidence 999999999999888877766 555666666554321110 0 00001123456777888887778899999999
Q ss_pred CcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcce
Q 011311 296 MGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGG 375 (489)
Q Consensus 296 ~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~ 375 (489)
......+...+++.++++.+.+|+|+++...... ....+|+++....++|+++.+|+||.+||.|+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~~~~~~~~~~~~~~~Nv~~~~~~Pq~~lL~hp~~~~ 367 (473)
T d2pq6a1 298 TTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIG----------GSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGG 367 (473)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTT----------TGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEE
T ss_pred cccccHHHHHHHHHHHHhcCCeEEEEEccCCccc----------ccccCcccchhhccCceEEeeeCCHHHHhcCCcCcE
Confidence 9989999999999999999999999998653111 134577777777889999999999999999999999
Q ss_pred EEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCH---HH
Q 011311 376 FVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDS---EV 452 (489)
Q Consensus 376 ~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~---~~ 452 (489)
||||||+||++||+++|||||++|+++||+.||+|+++.+|+|+.++. ++|+|+|+++|+++|+ |+ +|
T Consensus 368 fItHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~--------~~t~~~l~~ai~~vl~-d~~~~~~ 438 (473)
T d2pq6a1 368 FLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDT--------NVKREELAKLINEVIA-GDKGKKM 438 (473)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCS--------SCCHHHHHHHHHHHHT-SHHHHHH
T ss_pred EEecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCC--------CcCHHHHHHHHHHHHc-CChHHHH
Confidence 999999999999999999999999999999999999777799999972 6999999999999999 65 59
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 453 RKRVKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 453 ~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
|+||++|++++++++++||+|++.+++||+++..
T Consensus 439 r~~a~~l~~~~~~a~~~gg~s~~~~~~~i~~~~~ 472 (473)
T d2pq6a1 439 KQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 472 (473)
T ss_dssp HHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999864
No 5
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Probab=100.00 E-value=2.5e-42 Score=345.12 Aligned_cols=383 Identities=15% Similarity=0.112 Sum_probs=246.1
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|| |+|+++|++||++|+++||++| ++|| |+|||++++ .+.+.+. ..|++|
T Consensus 1 mr----Il~~~~gt~Ghv~P~l~lA~~L--~~rG--------h~V~~~t~~----------~~~~~v~------~~g~~~ 50 (401)
T d1rrva_ 1 MR----VLLSVCGTRGDVEIGVALADRL--KALG--------VQTRMCAPP----------AAEERLA------EVGVPH 50 (401)
T ss_dssp CE----EEEEEESCHHHHHHHHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------HHTCCE
T ss_pred Ce----EEEECCCChhHHHHHHHHHHHH--HHCC--------CEEEEEECh----------hhHHHHH------HCCCeE
Confidence 77 9999999999999999999999 9999 669999876 2345554 346888
Q ss_pred EEcCCCC--CCC-CCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCc-hHHHHHHHhCCCeEEEech
Q 011311 81 IGVPKMN--PPP-LDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCS-SMIDTANELGVPSYVFFTS 156 (489)
Q Consensus 81 ~~l~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~-~~~~vA~~lgiP~v~~~~~ 156 (489)
++++... ... .......... ............+.+.+..+ ..++|++|.|.... ++..+|+.+|+|++...+.
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~ 127 (401)
T d1rrva_ 51 VPVGLPQHMMLQEGMPPPPPEEE-QRLAAMTVEMQFDAVPGAAE--GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPS 127 (401)
T ss_dssp EECSCCGGGCCCTTSCCCCHHHH-HHHHHHHHHHHHHHHHHHTT--TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESS
T ss_pred EEcCCcHHhhhccccccccHHHH-HHHHHHHHHHHHHHHHHHHh--cCCCeEEEEcCchhhHHHHHHHHhCCCccccccc
Confidence 8876432 111 1111222222 22222222233333444433 46889999886544 6678999999999887665
Q ss_pred hHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccc--cCC--CchHHHHHHHHhhhccceEEe-cchhH
Q 011311 157 GAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCF--NKH--GGFSAFENFGRRFKETKGIIV-NTFEE 231 (489)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~gi~~-~s~~~ 231 (489)
+... ... ...+.+.... ......... ... ..+.......+.++...+... .....
T Consensus 128 ~~~~-----~~~--------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
T d1rrva_ 128 PVYL-----ASP--------------HLPPAYDEPT-TPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFG 187 (401)
T ss_dssp GGGS-----CCS--------------SSCCCBCSCC-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHH
T ss_pred chhh-----ccc--------------cccccccccc-ccccchhhhhHHHHHHHHHhhhHHHHHHHHHHhCCcccchhhh
Confidence 4310 000 0001100000 000000000 000 001111222333333333211 11111
Q ss_pred hhHHHHH------HHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcCCCHH-HH
Q 011311 232 LESHAVE------YLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGSFGEE-QI 304 (489)
Q Consensus 232 l~~~~~~------~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~-~~ 304 (489)
....... .+...+..++++.+||++..+. .+.+.++..|++..+ ++||++|||....... ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---------~~~~~~~~~~l~~~~--~~v~~~~gs~~~~~~~~~~ 256 (401)
T d1rrva_ 188 YGHGERPLLAADPVLAPLQPDVDAVQTGAWLLSDE---------RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAA 256 (401)
T ss_dssp HTTCSSCEECSCTTTSCCCSSCCCEECCCCCCCCC---------CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHH
T ss_pred hccccchhhcchhhhcccCCCCCeEEECCCccccc---------ccCCHHHHHhhccCC--CeEEEECCccccCCHHHHH
Confidence 1000000 0000023345788898876544 467889999998864 6999999998765554 46
Q ss_pred HHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEEecCCchh
Q 011311 305 QEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFVSHCGWNS 384 (489)
Q Consensus 305 ~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i~HgG~~s 384 (489)
+.++.++...+..++|..+..... .+ ..++|+++.+|+||.++|+|+++ ||||||+||
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~-----~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t 314 (401)
T d1rrva_ 257 KVAVEAIRAQGRRVILSRGWTELV---------------LP-----DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGT 314 (401)
T ss_dssp HHHHHHHHHTTCCEEEECTTTTCC---------------CS-----CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHH
T ss_pred HHHHHHHhhcCCeEEEeccccccc---------------cc-----cCCCCEEEEeccCcHHHhhhccE--EEecCCchH
Confidence 668899999999999988755210 11 23478899999999999999887 999999999
Q ss_pred HHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011311 385 ILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKAR 464 (489)
Q Consensus 385 ~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~ 464 (489)
++||+++|||+|++|+++||+.||+++++. |+|+.++.. ++|+++|+++|+++|+ ++||++|++++++++
T Consensus 315 ~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~-G~g~~l~~~-------~~~~~~L~~ai~~vl~--~~~r~~a~~~~~~~~ 384 (401)
T d1rrva_ 315 EHVATRAGVPQLVIPRNTDQPYFAGRVAAL-GIGVAHDGP-------TPTFESLSAALTTVLA--PETRARAEAVAGMVL 384 (401)
T ss_dssp HHHHHHHTCCEEECCCSBTHHHHHHHHHHH-TSEEECSSS-------CCCHHHHHHHHHHHTS--HHHHHHHHHHTTTCC
T ss_pred HHHHHHhCCCEEEecccccHHHHHHHHHHC-CCEEEcCcC-------CCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHh
Confidence 999999999999999999999999998776 999999865 7999999999999996 579999999998865
Q ss_pred HHHhcCCChHHHHHHHHHHH
Q 011311 465 LALRDGGSSYAATGRLIEDL 484 (489)
Q Consensus 465 ~~~~~~g~~~~~~~~~~~~~ 484 (489)
+ + +..+.++.+.+.+
T Consensus 385 ~----~-g~~~aa~~ie~~~ 399 (401)
T d1rrva_ 385 T----D-GAAAAADLVLAAV 399 (401)
T ss_dssp C----C-HHHHHHHHHHHHH
T ss_pred h----c-CHHHHHHHHHHHh
Confidence 2 2 3345555555444
No 6
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=100.00 E-value=1.2e-40 Score=332.25 Aligned_cols=375 Identities=16% Similarity=0.171 Sum_probs=235.9
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|| |+|+++|++||++|+++||++| +++| |+|||++++ .+.+.+. ..|++|
T Consensus 1 mk----il~~~~gt~Gh~~P~lala~~L--~~~G--------h~V~~~~~~----------~~~~~v~------~~g~~~ 50 (401)
T d1iira_ 1 MR----VLLATCGSRGDTEPLVALAVRV--RDLG--------ADVRMCAPP----------DCAERLA------EVGVPH 50 (401)
T ss_dssp CE----EEEECCSCHHHHHHHHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------HTTCCE
T ss_pred CE----EEEECCCChhHHHHHHHHHHHH--HHCC--------CEEEEEeCc----------chHHHHH------HcCCeE
Confidence 77 9999999999999999999999 9999 669999976 3455565 558999
Q ss_pred EEcCCCCCCCCCC--CCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCc---hHHHHHHHhCCCeEEEec
Q 011311 81 IGVPKMNPPPLDY--FKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCS---SMIDTANELGVPSYVFFT 155 (489)
Q Consensus 81 ~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~---~~~~vA~~lgiP~v~~~~ 155 (489)
++++......... ......+........ ....+.+.+.. ...+.++.+.... +...+++.+++|.+...+
T Consensus 51 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 125 (401)
T d1iira_ 51 VPVGPSARAPIQRAKPLTAEDVRRFTTEAI-ATQFDEIPAAA----EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFH 125 (401)
T ss_dssp EECCC-------CCSCCCHHHHHHHHHHHH-HHHHHHHHHHT----TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEES
T ss_pred EECCcchhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHHh----hcCcceEEeecchhHHHHHHHHHHhccccccccc
Confidence 9988654221111 112222222222222 22222333332 2445555554443 456789999999988776
Q ss_pred hhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCC-cccccCCC----chHHHHHHHHhhhccce-------
Q 011311 156 SGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLP-SLCFNKHG----GFSAFENFGRRFKETKG------- 223 (489)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~g------- 223 (489)
.+.... . ...|......+..... ........ ....+....+..++..+
T Consensus 126 ~~~~~~----------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T d1iira_ 126 CPSYVP----------S----------PYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDI 185 (401)
T ss_dssp SGGGSC----------C----------SSSCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCH
T ss_pred cccccc----------c----------ccccccccccccccchhcchhhhhhhhhHHHHHHHHHHHHHHHHhcCccchhh
Confidence 543100 0 0111100000000000 00000000 00111111122222111
Q ss_pred --------EEecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecC
Q 011311 224 --------IIVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGS 295 (489)
Q Consensus 224 --------i~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS 295 (489)
.++++...++.. . +..+..+.+|++..... .+.+.+...|++..+ ++||+++|+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~--~~i~~~~~~ 247 (401)
T d1iira_ 186 FTFGYTDHPWVAADPVLAPL------Q-PTDLDAVQTGAWILPDE---------RPLSPELAAFLDAGP--PPVYLGFGS 247 (401)
T ss_dssp HHHHHCSSCEECSCTTTSCC------C-CCSSCCEECCCCCCCCC---------CCCCHHHHHHHHTSS--CCEEEECC-
T ss_pred hhhcccchhhhcccccccCC------C-CcccccccccCcccCcc---------cccCHHHHHhhccCC--CeEEEccCc
Confidence 122222222210 0 23344666776654433 356777888888753 699999999
Q ss_pred CcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcce
Q 011311 296 MGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGG 375 (489)
Q Consensus 296 ~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~ 375 (489)
.. .+...+.+++++++..+.+++|+.+..... .. ..++|+++++|+||.++|+|+++
T Consensus 248 ~~-~~~~~~~~~~~al~~~~~~~~~~~~~~~~~------------~~--------~~~~nv~~~~~~p~~~~l~~~~~-- 304 (401)
T d1iira_ 248 LG-APADAVRVAIDAIRAHGRRVILSRGWADLV------------LP--------DDGADCFAIGEVNHQVLFGRVAA-- 304 (401)
T ss_dssp ---CCHHHHHHHHHHHHHTTCCEEECTTCTTCC------------CS--------SCGGGEEECSSCCHHHHGGGSSE--
T ss_pred cc-cchHHHHHHHHHHHHcCCeEEEeccCCccc------------cc--------cCCCCEEEEeccCHHHHHhhcCE--
Confidence 75 467788999999999999999998765210 01 12367889999999999999887
Q ss_pred EEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHH
Q 011311 376 FVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKR 455 (489)
Q Consensus 376 ~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~ 455 (489)
||||||+||++||+++|||+|++|+++||+.||+++++. |+|+.++.. ++|+++|+++|+++|+ ++|++|
T Consensus 305 ~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~-G~g~~l~~~-------~~~~~~l~~ai~~~l~--~~~~~~ 374 (401)
T d1iira_ 305 VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-GVGVAHDGP-------IPTFDSLSAALATALT--PETHAR 374 (401)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSS-------SCCHHHHHHHHHHHTS--HHHHHH
T ss_pred EEecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHC-CCEEEcCcC-------CCCHHHHHHHHHHHhC--HHHHHH
Confidence 999999999999999999999999999999999998776 999999865 8999999999999996 569999
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 456 VKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 456 a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
|+++++++++. |++ ...+.+++.+.+
T Consensus 375 a~~~~~~~~~~---~~~--~aa~~i~~~i~r 400 (401)
T d1iira_ 375 ATAVAGTIRTD---GAA--VAARLLLDAVSR 400 (401)
T ss_dssp HHHHHHHSCSC---HHH--HHHHHHHHHHHT
T ss_pred HHHHHHHHHhc---ChH--HHHHHHHHHHhc
Confidence 99999998742 332 345556665554
No 7
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=100.00 E-value=6.7e-41 Score=333.54 Aligned_cols=363 Identities=15% Similarity=0.172 Sum_probs=241.2
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRF 80 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 80 (489)
|| |+|++.|+.||++|+++||++| ++|| |+|||++++ .+.+.++ ..|++|
T Consensus 1 mr----il~~~~gt~Ghi~P~laLA~~L--~~rG--------h~V~~~~~~----------~~~~~v~------~~g~~~ 50 (391)
T d1pn3a_ 1 MR----VLITGCGSRGDTEPLVALAARL--RELG--------ADARMCLPP----------DYVERCA------EVGVPM 50 (391)
T ss_dssp CE----EEEEEESSHHHHHHHHHHHHHH--HHTT--------CEEEEEECG----------GGHHHHH------HHTCCE
T ss_pred CE----EEEEcCCChhHHHHHHHHHHHH--HHCC--------CEEEEEECh----------hhHhHHH------HCCCeE
Confidence 77 9999999999999999999999 9999 669999976 3455555 457889
Q ss_pred EEcCCCCCCCC----CCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCc---hHHHHHHHhCCCeEEE
Q 011311 81 IGVPKMNPPPL----DYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCS---SMIDTANELGVPSYVF 153 (489)
Q Consensus 81 ~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~---~~~~vA~~lgiP~v~~ 153 (489)
++++....... .........+..+. ...++. +.+.. .++|+||+|.+.. ++..+|+++++|++.+
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-l~~~~----~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~ 122 (391)
T d1pn3a_ 51 VPVGRAVRAGAREPGELPPGAAEVVTEVV---AEWFDK-VPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYT 122 (391)
T ss_dssp EECSSCSSGGGSCTTCCCTTCGGGHHHHH---HHHHHH-HHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEE
T ss_pred EECCccHHHHhhChhhhhHHHHHHHHHHH---HHHHHH-HHHHh----cCCCeEEEcccCchHHHHHHHHHHcCCceEEe
Confidence 98875431111 11111111112111 122222 22332 3789999998755 3466899999999888
Q ss_pred echhHHHHHHHhhccccCCCCcccCcCCcccccCCCCCCCCCCCCcccccCCCchHHHHHHHHhhhccceE---------
Q 011311 154 FTSGAAFLGFVLHLPTRGGEEFEESEADSADIFTYANPVPYRVLPSLCFNKHGGFSAFENFGRRFKETKGI--------- 224 (489)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi--------- 224 (489)
..++.. .|.......+ .....+. ...+....+..+...+.
T Consensus 123 ~~~~~~-------------------------~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (391)
T d1pn3a_ 123 VLSPDH-------------------------LPSEQSQAER-DMYNQGA-----DRLFGDAVNSHRASIGLPPVEHLYDY 171 (391)
T ss_dssp ESSGGG-------------------------SGGGSCHHHH-HHHHHHH-----HHHTHHHHHHHHHTTSCCCCCCHHHH
T ss_pred eccccc-------------------------cccccccchh-hHHHHHH-----HHHHHHHHHHHHHHhcCccccccccc
Confidence 765431 0100000000 0000000 00111111222211111
Q ss_pred ------EecchhHhhHHHHHHHhhcCCCCCEEEecccccCCCCCCCCCCCCCCChhHHHHhhhcCCCCceEEEeecCCcC
Q 011311 225 ------IVNTFEELESHAVEYLMKCDGVPPVYNVGPMIDLHGDIHARPRGGGTQRDEIIRWLDDQPASSVVFLCFGSMGS 298 (489)
Q Consensus 225 ------~~~s~~~l~~~~~~~~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~ 298 (489)
.+.....+.. .. +..++.+++||+..... .+.++++..|+...+ ++||+++|+...
T Consensus 172 ~~~~~~~l~~~~~~~~------~~-~~~~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~--~~v~~~~~~~~~ 233 (391)
T d1pn3a_ 172 GYTDQPWLAADPVLSP------LR-PTDLGTVQTGAWILPDE---------RPLSAELEAFLAAGS--TPVYVGFGSSSR 233 (391)
T ss_dssp HHCSSCEECSCTTTSC------CC-TTCCSCCBCCCCCCCCC---------CCCCHHHHHHTTSSS--CCEEEECTTCCS
T ss_pred ccccceeeccchhhhc------cC-CCCCCeeeecCcccCcc---------ccCCHHHhhhhccCC--CeEEEecccccc
Confidence 1111111110 00 23345778888765443 456788888887754 589999999876
Q ss_pred CCHH-HHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHhccCCcceEE
Q 011311 299 FGEE-QIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVLAHSAIGGFV 377 (489)
Q Consensus 299 ~~~~-~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL~~~~~~~~i 377 (489)
.... ....++.++...+.+++|..+.... ... ..++|+++.+|+||.++|+|+++ ||
T Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------------~~~-----~~~~~v~i~~~~p~~~ll~~a~~--~v 291 (391)
T d1pn3a_ 234 PATADAAKMAIKAVRASGRRIVLSRGWADL---------------VLP-----DDGADCFVVGEVNLQELFGRVAA--AI 291 (391)
T ss_dssp THHHHHHHHHHHHHHHTTCCEEEECTTTTC---------------CCS-----SCCTTCCEESSCCHHHHHTTSSC--EE
T ss_pred ccHHHHHHHHHHHHHhcCCEEEEecccccc---------------ccc-----cCCCCEEEecccCHHHHHhhccE--EE
Confidence 5554 4666889999999999988765421 011 12478899999999999999988 99
Q ss_pred ecCCchhHHHHHHhCCcEEeccCcch----hhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHH
Q 011311 378 SHCGWNSILESVWFGVPIVTWPIYAE----QQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVR 453 (489)
Q Consensus 378 ~HgG~~s~~eal~~GvP~v~~P~~~D----Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (489)
||||+||++||+++|||+|++|+.+| |+.||+++++. |+|+.++.. .+|+++|+++|+++|+ + +||
T Consensus 292 ~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~-G~g~~l~~~-------~~~~~~l~~~i~~~l~-~-~~r 361 (391)
T d1pn3a_ 292 HHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAEL-GVGVAVDGP-------VPTIDSLSAALDTALA-P-EIR 361 (391)
T ss_dssp EESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHH-TSEEEECCS-------SCCHHHHHHHHHHHTS-T-THH
T ss_pred ecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHC-CCEEEcCcC-------CCCHHHHHHHHHHHhC-H-HHH
Confidence 99999999999999999999999988 99999998776 999999865 8999999999999997 3 699
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhhC
Q 011311 454 KRVKEVSEKARLALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 454 ~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
+||+++++++++ +...+.++.+.+.|.++
T Consensus 362 ~~a~~~a~~~~~-----~g~~~aa~~i~~~l~~~ 390 (391)
T d1pn3a_ 362 ARATTVADTIRA-----DGTTVAAQLLFDAVSLE 390 (391)
T ss_dssp HHHHHHGGGSCS-----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----cCHHHHHHHHHHHHHhc
Confidence 999999988642 23446667776666654
No 8
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=99.88 E-value=3.1e-21 Score=187.71 Aligned_cols=118 Identities=15% Similarity=0.185 Sum_probs=89.3
Q ss_pred hcCCCccccccCHH-HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCc---chhhHHHHHHHHhhCeEEEeeecccc
Q 011311 352 SKGRGMICGWAPQK-EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIY---AEQQINAFQMVRDLGLAVELRLDYRR 427 (489)
Q Consensus 352 ~~~~~~v~~w~pq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~ 427 (489)
...+..+.+|.++. ++|+.+++ +|||||.||++|++++|+|+|++|+. +||..||+++++. |+|+.++..
T Consensus 229 ~~~~~~v~~f~~~~~~lm~~adl--~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~-G~~~~~~~~--- 302 (351)
T d1f0ka_ 229 GQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQP--- 302 (351)
T ss_dssp TCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCGG---
T ss_pred ccccceeeeehhhHHHHHHhCch--hhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHC-CCEEEechh---
Confidence 34566777888754 69999999 99999999999999999999999975 4899999998776 999998755
Q ss_pred CCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhhC
Q 011311 428 GTENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
+++.+.|.++|.++.. ++..++++.+++. .... +...|-+.|.+|.++
T Consensus 303 ----~~~~e~l~~~l~~l~~------~~~~~~~~~~~~~-~~~~-~a~~i~~~i~~l~~~ 350 (351)
T d1f0ka_ 303 ----QLSVDAVANTLAGWSR------ETLLTMAERARAA-SIPD-ATERVANEVSRVARA 350 (351)
T ss_dssp ----GCCHHHHHHHHHTCCH------HHHHHHHHHHHHT-CCTT-HHHHHHHHHHHHHTT
T ss_pred ----hCCHHHHHHHHHhhCH------HHHHHHHHHHHcc-CCcc-HHHHHHHHHHHHHhc
Confidence 8899999999977532 2233444444443 2232 345566666666553
No 9
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=98.61 E-value=1.5e-05 Score=77.49 Aligned_cols=91 Identities=12% Similarity=0.073 Sum_probs=61.6
Q ss_pred CCCccccccCHH---HHhccCCcceEEec----CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 354 GRGMICGWAPQK---EVLAHSAIGGFVSH----CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 354 ~~~~v~~w~pq~---~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
.+..+..++|+. .++..+++ ++.- +.-++++||+++|+|+|+....+ ... +++. +.|..++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~adi--~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~----~~e-~i~~-~~G~~~~---- 376 (437)
T d2bisa1 309 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVGG----LRD-IITN-ETGILVK---- 376 (437)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHTTTCEEEEESCTT----HHH-HCCT-TTCEEEC----
T ss_pred cceeccccCcHHHHHHHHhhhcc--ccccccccccchHHHHHHHCCCCEEEeCCCC----cHH-hEEC-CcEEEEC----
Confidence 344555888875 47788887 5533 34569999999999999875542 222 3455 6777665
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCH----HHHHHHHHHHH
Q 011311 427 RGTENHVMADELARAVGCVMDGDS----EVRKRVKEVSE 461 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~~~~----~~~~~a~~l~~ 461 (489)
.-+.++|+++|.+++++++ ++++++++.++
T Consensus 377 -----~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 410 (437)
T d2bisa1 377 -----AGDPGELANAILKALELSRSDLSKFRENCKKRAM 410 (437)
T ss_dssp -----TTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3478999999999996343 45666665543
No 10
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=98.41 E-value=0.00032 Score=65.54 Aligned_cols=93 Identities=13% Similarity=0.163 Sum_probs=62.1
Q ss_pred CCCccccccCH-HHHhccCCcceEEe--c--CCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccC
Q 011311 354 GRGMICGWAPQ-KEVLAHSAIGGFVS--H--CGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRG 428 (489)
Q Consensus 354 ~~~~v~~w~pq-~~iL~~~~~~~~i~--H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 428 (489)
+++.+..+..+ ..+|+.+++ ||. + |-.+++.||+++|+|+|+-...+ ....+.+. +.|..+..
T Consensus 252 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~i~~~-~~G~l~~~----- 319 (370)
T d2iw1a1 252 SNVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVCG----YAHYIADA-NCGTVIAE----- 319 (370)
T ss_dssp GGEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTST----TTHHHHHH-TCEEEECS-----
T ss_pred ccccccccccccccccccccc--cccccccccccceeeecccCCeeEEEeCCCC----hHHHhcCC-CceEEEcC-----
Confidence 34455555544 469999999 553 3 34578999999999999975543 33344455 77765532
Q ss_pred CCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 011311 429 TENHVMADELARAVGCVMDGDSEVRKRVKEVSEK 462 (489)
Q Consensus 429 ~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~ 462 (489)
.-+.++++++|.++++ |++.+++..+-+++
T Consensus 320 ---~~d~~~la~~i~~ll~-d~~~~~~~~~~ar~ 349 (370)
T d2iw1a1 320 ---PFSQEQLNEVLRKALT-QSPLRMAWAENARH 349 (370)
T ss_dssp ---SCCHHHHHHHHHHHHH-CHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHc-CHHHHHHHHHHHHH
Confidence 3488999999999998 66555443333333
No 11
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}
Probab=98.05 E-value=0.00012 Score=69.78 Aligned_cols=110 Identities=15% Similarity=0.099 Sum_probs=79.7
Q ss_pred cCCCccccccCHHH---HhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCC
Q 011311 353 KGRGMICGWAPQKE---VLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGT 429 (489)
Q Consensus 353 ~~~~~v~~w~pq~~---iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 429 (489)
.+|+.+.+.+++.+ +|.++++ +|+.+|.+ ..||.+.|+|+|.+.-..+++. + + +. |.-+.+
T Consensus 255 ~~ni~~~~~l~~~~fl~llk~s~~--vIgnSss~-i~Ea~~lg~P~Inir~~tERqe-~-~--~~-g~nilv-------- 318 (377)
T d1o6ca_ 255 SDRVHLIEPLEVIDFHNFAAKSHF--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE-G-V--EA-GTLKLA-------- 318 (377)
T ss_dssp CSSEEECCCCCHHHHHHHHHHCSE--EEEC--CH-HHHGGGGTCCEEEECSCCC----C-T--TT-TSSEEE--------
T ss_pred ccceEeccccchHHHHHHHhhhhe--eecccchh-HHhhhhhhceEEEeCCCCcCcc-h-h--hc-CeeEEC--------
Confidence 36778888888665 7899998 99999988 7799999999999987666654 2 1 33 654443
Q ss_pred CCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 430 ENHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 430 ~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
..+.++|.+++.+++. +..+.++..+.. .-.++|++|.+.++.|++.+.
T Consensus 319 --~~~~~~I~~~i~~~l~-~~~~~~~~~~~~----npYGdG~as~rI~~~L~~~~~ 367 (377)
T d1o6ca_ 319 --GTDEENIYQLAKQLLT-DPDEYKKMSQAS----NPYGDGEASRRIVEELLFHYG 367 (377)
T ss_dssp --CSCHHHHHHHHHHHHH-CHHHHHHHHHCC----CTTCCSCHHHHHHHHHHHHTT
T ss_pred --CCCHHHHHHHHHHHHh-ChHHHhhhccCC----CCCCCChHHHHHHHHHHHhhC
Confidence 4578999999999998 666655543332 225889999999999988654
No 12
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Probab=97.88 E-value=0.00061 Score=64.57 Aligned_cols=164 Identities=12% Similarity=0.124 Sum_probs=101.6
Q ss_pred CCceEEEeecCCcCC-CHHHHHHHHHHHhhcC--CeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccc
Q 011311 285 ASSVVFLCFGSMGSF-GEEQIQEIASGLEKSG--VRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGW 361 (489)
Q Consensus 285 ~~~vV~vs~GS~~~~-~~~~~~~~~~al~~~~--~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w 361 (489)
.++.++|++-..... ..+.+.+++..+.... ..++|-..... . ....-... .....|+.++.-
T Consensus 194 ~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~------------~-~~~~~~~~-~~~~~n~~~~~~ 259 (373)
T d1v4va_ 194 EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP------------V-VREAVFPV-LKGVRNFVLLDP 259 (373)
T ss_dssp SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH------------H-HHHHHHHH-HTTCTTEEEECC
T ss_pred cccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccc------------c-chhhhhhh-hcccccceeecc
Confidence 456888887654432 2344556666666554 34444332210 0 00000000 122256777777
Q ss_pred cCHHH---HhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHH
Q 011311 362 APQKE---VLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADEL 438 (489)
Q Consensus 362 ~pq~~---iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l 438 (489)
+++.+ +|.+|.+ +|+.+|.+ ..||.+.|+|+|.+.-.++-+.- + +. |.-+.+ ..+.++|
T Consensus 260 l~~~~~l~ll~~s~~--vignSssg-i~Ea~~lg~P~Inir~~~eRqeg--~--~~-g~nvlv----------~~d~~~I 321 (373)
T d1v4va_ 260 LEYGSMAALMRASLL--LVTDSGGL-QEEGAALGVPVVVLRNVTERPEG--L--KA-GILKLA----------GTDPEGV 321 (373)
T ss_dssp CCHHHHHHHHHTEEE--EEESCHHH-HHHHHHTTCCEEECSSSCSCHHH--H--HH-TSEEEC----------CSCHHHH
T ss_pred chHHHHHHHhhhcee--Eecccchh-hhcchhhcCcEEEeCCCccCHHH--H--hc-CeeEEc----------CCCHHHH
Confidence 77655 6888887 99998865 67999999999999775554442 2 34 655533 4589999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 011311 439 ARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLF 485 (489)
Q Consensus 439 ~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 485 (489)
.+++..++. ++.++++...... -.++|.++.+.++.+...+.
T Consensus 322 ~~~i~~~l~-~~~~~~~~~~~~n----pYGdG~as~rI~~~L~~~~~ 363 (373)
T d1v4va_ 322 YRVVKGLLE-NPEELSRMRKAKN----PYGDGKAGLMVARGVAWRLG 363 (373)
T ss_dssp HHHHHHHHT-CHHHHHHHHHSCC----SSCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHc-CHHHHhhcccCCC----CCCCCHHHHHHHHHHHHHhC
Confidence 999999998 7777665444222 24778888887777766553
No 13
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
Probab=97.88 E-value=0.00074 Score=64.00 Aligned_cols=106 Identities=11% Similarity=0.106 Sum_probs=75.1
Q ss_pred CCCccccccCHH---HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCC
Q 011311 354 GRGMICGWAPQK---EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTE 430 (489)
Q Consensus 354 ~~~~v~~w~pq~---~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 430 (489)
.|+.+.+-+++. .+|.+|++ +|+..|.+ ..||.+.|+|+|.+--..+|+. ++ +. |.-+.+
T Consensus 263 ~ni~~~~~l~~~~fl~ll~~a~~--vignSssg-i~Ea~~lg~P~Inir~~ter~~---~~-~~-g~~i~v--------- 325 (376)
T d1f6da_ 263 KNVILIDPQEYLPFVWLMNHAWL--ILTDSGGI-QEEAPSLGKPVLVMRDTTERPE---AV-TA-GTVRLV--------- 325 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESSSGG-GGTGGGGTCCEEECSSCCSCHH---HH-HH-TSEEEC---------
T ss_pred ccceeeccccHHHHHHHHhhceE--EEecCcch-HhhHHHhCCCEEEcCCCccCcc---ce-ec-CeeEEC---------
Confidence 566666666655 47899998 99998864 6799999999999877777775 43 44 655443
Q ss_pred CccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011311 431 NHVMADELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIE 482 (489)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 482 (489)
..+.++|.+++.+++. ++.+++...+... -.++|.++.+.++.|-+
T Consensus 326 -~~~~~~I~~ai~~~l~-~~~~~~~~~~~~n----pYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 326 -GTDKQRIVEEVTRLLK-DENEYQAMSRAHN----PYGDGQACSRILEALKN 371 (376)
T ss_dssp -CSSHHHHHHHHHHHHH-CHHHHHHHHHSCC----TTCCSCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHh-ChHhhhhhccCCC----CCCCChHHHHHHHHHHh
Confidence 3588999999999998 6655544333222 14778888777765543
No 14
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.84 E-value=0.0019 Score=63.21 Aligned_cols=138 Identities=15% Similarity=0.093 Sum_probs=79.8
Q ss_pred CCceEEEeecCCc-CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccC
Q 011311 285 ASSVVFLCFGSMG-SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAP 363 (489)
Q Consensus 285 ~~~vV~vs~GS~~-~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~p 363 (489)
++..+++..|.+. ....+.+.+.+..+.+.+.++++.-.+.. .. ...+ .....+..+++.+..+.+
T Consensus 289 ~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~-----------~~-~~~~-~~~~~~~~~~v~~~~~~~ 355 (477)
T d1rzua_ 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV-----------AL-EGAL-LAAASRHHGRVGVAIGYN 355 (477)
T ss_dssp SSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCH-----------HH-HHHH-HHHHHHTTTTEEEEESCC
T ss_pred CCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCc-----------hH-HHHH-HHHHhhcCCeEEEEcccC
Confidence 3445667788866 33444444444444456778776543321 00 0000 011223456777766666
Q ss_pred HHH---HhccCCcceEEecC---Cch-hHHHHHHhCCcEEeccCcc--hh---hHHHHHHHHhhCeEEEeeeccccCCCC
Q 011311 364 QKE---VLAHSAIGGFVSHC---GWN-SILESVWFGVPIVTWPIYA--EQ---QINAFQMVRDLGLAVELRLDYRRGTEN 431 (489)
Q Consensus 364 q~~---iL~~~~~~~~i~Hg---G~~-s~~eal~~GvP~v~~P~~~--DQ---~~na~~v~~~~G~G~~l~~~~~~~~~~ 431 (489)
+.. ++..+++ ||.-. |.| +++||+++|+|+|+--..+ |. ..+...+ ..-+.|..++
T Consensus 356 ~~~~~~~~~~aD~--~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~-~~~~~G~l~~--------- 423 (477)
T d1rzua_ 356 EPLSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALA-SKAATGVQFS--------- 423 (477)
T ss_dssp HHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHH-TTCCCBEEES---------
T ss_pred hhHHHHHHHhCcc--ccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccc-cCCCceEEeC---------
Confidence 532 6778888 88766 334 7889999999999855431 11 1112121 2225777765
Q ss_pred ccCHHHHHHHHHHHhc
Q 011311 432 HVMADELARAVGCVMD 447 (489)
Q Consensus 432 ~~~~~~l~~ai~~vl~ 447 (489)
.-+.++|+++|+++++
T Consensus 424 ~~d~~~la~ai~~~l~ 439 (477)
T d1rzua_ 424 PVTLDGLKQAIRRTVR 439 (477)
T ss_dssp SCSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 4589999999998875
No 15
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.70 E-value=4.5e-05 Score=63.69 Aligned_cols=93 Identities=9% Similarity=0.002 Sum_probs=63.6
Q ss_pred cCCCccccccCHH---HHhccCCcceEEecC--CchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeecccc
Q 011311 353 KGRGMICGWAPQK---EVLAHSAIGGFVSHC--GWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRR 427 (489)
Q Consensus 353 ~~~~~v~~w~pq~---~iL~~~~~~~~i~Hg--G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 427 (489)
.+|+.+.+|+|+. .+|..+++..+-+.. ..++++||+++|+|+|+.+..+-+ ..+.+. ..|...
T Consensus 66 ~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~----e~i~~~-~~g~~~------ 134 (166)
T d2f9fa1 66 PDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFK----ETVINE-KTGYLV------ 134 (166)
T ss_dssp CTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHH----HHCCBT-TTEEEE------
T ss_pred cCcEEEeecccccccccccccccccccccccccccccccccccccccceeecCCcce----eeecCC-cccccC------
Confidence 4688888999985 478889983332222 245899999999999998765422 223333 566543
Q ss_pred CCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011311 428 GTENHVMADELARAVGCVMDGDSEVRKRVKEVS 460 (489)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~ 460 (489)
..+.+++.++|.+++++.+.+++++.+-+
T Consensus 135 ----~~d~~~~~~~i~~l~~~~~~~~~~~~~~a 163 (166)
T d2f9fa1 135 ----NADVNEIIDAMKKVSKNPDKFKKDCFRRA 163 (166)
T ss_dssp ----CSCHHHHHHHHHHHHHCTTTTHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 23789999999999984356776665443
No 16
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=96.91 E-value=0.0061 Score=51.52 Aligned_cols=90 Identities=12% Similarity=0.099 Sum_probs=60.2
Q ss_pred CCCccccccCHH---HHhccCCcceEEe----cCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccc
Q 011311 354 GRGMICGWAPQK---EVLAHSAIGGFVS----HCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYR 426 (489)
Q Consensus 354 ~~~~v~~w~pq~---~iL~~~~~~~~i~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 426 (489)
....+..+++.. .++..+++ +|. .|--+++.||+++|+|+|+--. .... .++.. +.|..++
T Consensus 92 ~~~~~~~~~~~~~l~~~~~~~di--~v~ps~~e~~~~~~~Eam~~G~pvI~~~~----~~~~-e~i~~-~~g~~~~---- 159 (196)
T d2bfwa1 92 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLR-DIITN-ETGILVK---- 159 (196)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHH-HHCCT-TTCEEEC----
T ss_pred eeEEeeeccccccchhccccccc--cccccccccccccchhhhhcCceeeecCC----Cccc-eeecC-CceeeEC----
Confidence 344455888864 47888998 763 4446799999999999998543 2222 33444 6777665
Q ss_pred cCCCCccCHHHHHHHHHHHhcCCH----HHHHHHHHHH
Q 011311 427 RGTENHVMADELARAVGCVMDGDS----EVRKRVKEVS 460 (489)
Q Consensus 427 ~~~~~~~~~~~l~~ai~~vl~~~~----~~~~~a~~l~ 460 (489)
.-+.++++++|.++++.++ .++++|++-+
T Consensus 160 -----~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a 192 (196)
T d2bfwa1 160 -----AGDPGELANAILKALELSRSDLSKFRENCKKRA 192 (196)
T ss_dssp -----TTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3488999999999886333 3445555443
No 17
>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}
Probab=90.71 E-value=2.9 Score=37.17 Aligned_cols=105 Identities=11% Similarity=0.119 Sum_probs=60.5
Q ss_pred hhcCCCCceEEEeecCCc----CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCC
Q 011311 280 LDDQPASSVVFLCFGSMG----SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGR 355 (489)
Q Consensus 280 l~~~~~~~vV~vs~GS~~----~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 355 (489)
+.....++.|.+..|+-. .++.+.+.++++.|.+.+..+++..++. +.+ ..+.+..........+
T Consensus 174 ~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~----------e~~-~~~~~~~~~~~~~~~~ 242 (348)
T d1pswa_ 174 FSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK----------DHE-AGNEILAALNTEQQAW 242 (348)
T ss_dssp TTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG----------GHH-HHHHHHTTSCHHHHTT
T ss_pred hccccCCCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccc----------hHH-HHHHHHHhhhcccccc
Confidence 333345677777777532 5677889999999988887776653332 100 0000000000000111
Q ss_pred Cc-ccc--ccCH-HHHhccCCcceEEecCCchhHHHHHHhCCcEEec
Q 011311 356 GM-ICG--WAPQ-KEVLAHSAIGGFVSHCGWNSILESVWFGVPIVTW 398 (489)
Q Consensus 356 ~~-v~~--w~pq-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 398 (489)
+. +.+ -+.+ ..++.++++ +|+.= .|.++-|.+.|+|+|++
T Consensus 243 ~~~l~g~~sl~el~~li~~a~l--~I~~D-tg~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 243 CRNLAGETQLDQAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred cccccCCccHHHHHHHHhccee--EeecC-ccHHHHHHHcCCCEEEE
Confidence 11 111 1233 458899998 88765 46789999999999998
No 18
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}
Probab=90.68 E-value=0.73 Score=43.73 Aligned_cols=108 Identities=19% Similarity=0.088 Sum_probs=67.6
Q ss_pred ccccccCHHH---HhccCCcceEEe---cCCch-hHHHHHHhCCcE----EeccCcchhhHHHHHHHHhhCeEEEeeecc
Q 011311 357 MICGWAPQKE---VLAHSAIGGFVS---HCGWN-SILESVWFGVPI----VTWPIYAEQQINAFQMVRDLGLAVELRLDY 425 (489)
Q Consensus 357 ~v~~w~pq~~---iL~~~~~~~~i~---HgG~~-s~~eal~~GvP~----v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 425 (489)
++...+++.+ ++..+++ ++. .-|+| +..|++++|+|. |++.-++- + .+.++-|+.++
T Consensus 334 ~~~~~~~~~~l~a~~~~Adv--~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G----~---~~~l~~g~lVn--- 401 (456)
T d1uqta_ 334 YLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----A---ANELTSALIVN--- 401 (456)
T ss_dssp EECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----G---GGTCTTSEEEC---
T ss_pred eccCCcCHHHHhHHHhhhce--eecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCC----C---HHHhCCeEEEC---
Confidence 3345566654 5677777 553 45666 779999999993 33332221 1 12234466665
Q ss_pred ccCCCCccCHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhhC
Q 011311 426 RRGTENHVMADELARAVGCVMDGDS-EVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl~~~~-~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
..+.++++++|.++|+.++ +-+++.+++.+.+++ -+...-.+.|+++|.+-
T Consensus 402 ------P~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~-----~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 402 ------PYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 453 (456)
T ss_dssp ------TTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred ------cCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHHhh
Confidence 4589999999999997333 445555555555443 25566779999998763
No 19
>d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]}
Probab=67.27 E-value=12 Score=28.97 Aligned_cols=143 Identities=13% Similarity=0.147 Sum_probs=74.4
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHH
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKE 366 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~ 366 (489)
+.|-|-+||.. +....+++.+.|+++|..+-..+-... ..|+. +.+|+.+..
T Consensus 2 ~~V~IimGS~S--D~~~~~~a~~~L~~~gi~~~~~v~SAH----------------rtp~r----------l~~~~~~~~ 53 (155)
T d1xmpa_ 2 SLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH----------------RTPDY----------MFEYAETAR 53 (155)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT----------------TSHHH----------HHHHHHHTT
T ss_pred CEEEEEECcHh--hHHHHHHHHHHHHHcCCcEEEEEechh----------------cChHH----------HHHHHHHHH
Confidence 57777789844 667888999999999998766654431 12221 222222221
Q ss_pred HhccCCcceEEecCCch----hHHHHHHhCCcEEeccCcchh---hHHHHHHHHhh-CeEEEeeeccccCCCCccCHHHH
Q 011311 367 VLAHSAIGGFVSHCGWN----SILESVWFGVPIVTWPIYAEQ---QINAFQMVRDL-GLAVELRLDYRRGTENHVMADEL 438 (489)
Q Consensus 367 iL~~~~~~~~i~HgG~~----s~~eal~~GvP~v~~P~~~DQ---~~na~~v~~~~-G~G~~l~~~~~~~~~~~~~~~~l 438 (489)
- ..+++||.=.|.- ++..+. .-.|+|.+|....- .+.---+++.. |+.+..-.- + .++..++.-+
T Consensus 54 ~---~~~~viIa~AG~aa~Lpgvva~~-t~~PVIgVP~~~~~~~G~d~llS~vqMP~Gipv~tv~v-~--~~~~~nAa~~ 126 (155)
T d1xmpa_ 54 E---RGLKVIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAI-G--KAGSTNAGLL 126 (155)
T ss_dssp T---TTCCEEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCS-S--HHHHHHHHHH
T ss_pred h---hcceEEEeecccCCCchhHHHHh-ccceEEEEEeecccCcCcccHHHHHhCccCCCceEEEe-c--CcchHHHHHH
Confidence 1 1233388766643 333333 45899999986432 22111122221 443321100 0 0001222333
Q ss_pred HHHHHHHhc-CCHHHHHHHHHHHHHHHHHH
Q 011311 439 ARAVGCVMD-GDSEVRKRVKEVSEKARLAL 467 (489)
Q Consensus 439 ~~ai~~vl~-~~~~~~~~a~~l~~~~~~~~ 467 (489)
+. ++|. .|++++++.+..++.+++.+
T Consensus 127 A~---~Il~~~d~~l~~~l~~~r~~~~~~v 153 (155)
T d1xmpa_ 127 AA---QILGSFHDDIHDALELRREAIEKDV 153 (155)
T ss_dssp HH---HHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HH---HHHccCCHHHHHHHHHHHHHHHHhh
Confidence 33 3443 26888888888887776653
No 20
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=63.29 E-value=3.8 Score=31.30 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=40.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhh
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLA 68 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~ 68 (489)
|.+|++.+.++-+|-....-++..| ..+| ++|.++....+ ...+++.+.
T Consensus 3 k~kVvi~~~~gD~H~lG~~mva~~l--~~~G--------~~V~~LG~~~p------~e~iv~a~~ 51 (137)
T d1ccwa_ 3 KKTIVLGVIGSDCHAVGNKILDHAF--TNAG--------FNVVNIGVLSP------QELFIKAAI 51 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHH--HHTT--------CEEEEEEEEEC------HHHHHHHHH
T ss_pred CCEEEEEecCCChhHHHHHHHHHHH--HHCC--------CeEEecccccC------HHHHHHHHH
Confidence 7899999999999999999999999 9999 88999976522 235666554
No 21
>d1j8yf1 a.24.13.1 (F:3-86) Signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=56.08 E-value=13 Score=25.44 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhh
Q 011311 436 DELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFG 486 (489)
Q Consensus 436 ~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 486 (489)
+.|.++++++.+...---+...++-+.++.|+-+...+...+.+|++.+++
T Consensus 3 ~~l~~a~~kl~~~~~i~E~~i~~~l~eIr~ALLeADVn~~vv~~f~~~ik~ 53 (84)
T d1j8yf1 3 DNLRDTVRKFLTGSSSYDKAVEDFIKELQKSLISADVNVKLVFSLTNKIKE 53 (84)
T ss_dssp HHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHH
Confidence 445666666665221222345555555555565566667777777766664
No 22
>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]}
Probab=56.06 E-value=37 Score=26.20 Aligned_cols=144 Identities=17% Similarity=0.160 Sum_probs=72.9
Q ss_pred EEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHh
Q 011311 289 VFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVL 368 (489)
Q Consensus 289 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL 368 (489)
|-|-+||.. +....+++.+.|+.+|..+-..+-... ..|+.+ .+|+.+..-
T Consensus 4 V~IImGS~S--D~~~~~~a~~~L~~~gI~~e~~v~SAH----------------Rtp~~l----------~~~~~~~~~- 54 (163)
T d1qcza_ 4 VAIVMGSKS--DWATMQFAAEIFEILNVPHHVEVVSAH----------------RTPDKL----------FSFAESAEE- 54 (163)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHHTCCEEEEECCTT----------------TCHHHH----------HHHHHHTTT-
T ss_pred EEEEECcHh--hHHHHHHHHHHHHHcCCCeEEEEeccc----------------cCHHHH----------HHHHHHHHH-
Confidence 344478844 667888999999999988766654431 122222 111111111
Q ss_pred ccCCcceEEecCCchhHHHH---HHhCCcEEeccCcchh---hHHHHHHHHh-hCeEEEeeeccccCCCCccCHHHHHHH
Q 011311 369 AHSAIGGFVSHCGWNSILES---VWFGVPIVTWPIYAEQ---QINAFQMVRD-LGLAVELRLDYRRGTENHVMADELARA 441 (489)
Q Consensus 369 ~~~~~~~~i~HgG~~s~~ea---l~~GvP~v~~P~~~DQ---~~na~~v~~~-~G~G~~l~~~~~~~~~~~~~~~~l~~a 441 (489)
....+ ||.=+|.-.-+-+ -..-+|+|.+|...+- .+.---+++. .|+.+..-.- +.++..++.-++..
T Consensus 55 ~~~~V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~~~g~d~lls~~qMp~g~pv~tv~v---~~~~~~nAal~A~~ 129 (163)
T d1qcza_ 55 NGYQV--IIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAI---GKAGAANAALLAAQ 129 (163)
T ss_dssp TTCSE--EEEEECSSCCHHHHHHHSCSSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCS---SHHHHHHHHHHHHH
T ss_pred cCCeE--EEEeccCCCcccchhhHhccceeeeccccccccCCcchhhHHhhccCCCCceEEEE---ecCchHHHHHHHHH
Confidence 12334 8877765422222 2246899999996442 1111112221 1444322100 00012233333333
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHh
Q 011311 442 VGCVMDGDSEVRKRVKEVSEKARLALR 468 (489)
Q Consensus 442 i~~vl~~~~~~~~~a~~l~~~~~~~~~ 468 (489)
|-. +. |+.++++.++.++.+++.+.
T Consensus 130 IL~-~~-d~~l~~kl~~~r~~~~~~v~ 154 (163)
T d1qcza_ 130 ILA-TH-DKELHQRLNDWRKAQTDEVL 154 (163)
T ss_dssp HHH-TT-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHc-CC-CHHHHHHHHHHHHHHHHHHh
Confidence 322 23 68999999888888777653
No 23
>d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]}
Probab=51.91 E-value=20 Score=27.78 Aligned_cols=146 Identities=15% Similarity=0.182 Sum_probs=75.9
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHH
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKE 366 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~ 366 (489)
|.|-|-+||.. +....++..+.|+.+|..+-..+-... ..|+.+. +|+.+.
T Consensus 3 P~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~v~SAH----------------R~p~~l~----------~~~~~~- 53 (159)
T d1u11a_ 3 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAH----------------RTPDRLA----------DYARTA- 53 (159)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT----------------TCHHHHH----------HHHHHT-
T ss_pred CeEEEEeCCHh--hHHHHHHHHHHHHHhCCceEEEEehHh----------------hChHHHH----------HHHHHH-
Confidence 45666688844 566788899999999988765554331 1222221 111111
Q ss_pred HhccCCcceEEecCCchhHHHH---HHhCCcEEeccCcc---hhhHHHHHHHHhh-CeEEEeeeccccCCCCccCHHHHH
Q 011311 367 VLAHSAIGGFVSHCGWNSILES---VWFGVPIVTWPIYA---EQQINAFQMVRDL-GLAVELRLDYRRGTENHVMADELA 439 (489)
Q Consensus 367 iL~~~~~~~~i~HgG~~s~~ea---l~~GvP~v~~P~~~---DQ~~na~~v~~~~-G~G~~l~~~~~~~~~~~~~~~~l~ 439 (489)
....++.||.=.|.-.-+-+ -..-.|+|.+|... +..+.---+++.. |+.+..-.- +.++-.++.-++
T Consensus 54 --e~~~~~viIa~AG~aaaLpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~~qMP~g~pv~tv~v---g~~~~~nAa~~A 128 (159)
T d1u11a_ 54 --AERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAI---GASGAKNAALLA 128 (159)
T ss_dssp --TTTTCCEEEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCS---SHHHHHHHHHHH
T ss_pred --HhcCCeEEEEEecCCCCCccceeeecceeEEEeccccccccccccHHHHhhCcCCCCceEEEe---cCCchHHHHHHH
Confidence 11123337776664433332 23457999999754 3444333333321 443321100 000122233333
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q 011311 440 RAVGCVMDGDSEVRKRVKEVSEKARLALR 468 (489)
Q Consensus 440 ~ai~~vl~~~~~~~~~a~~l~~~~~~~~~ 468 (489)
..|- -+. |++++++.++.++.+++.+.
T Consensus 129 ~~IL-~~~-d~~l~~kl~~~r~~~~~~v~ 155 (159)
T d1u11a_ 129 ASIL-ALY-NPALAARLETWRALQTASVP 155 (159)
T ss_dssp HHHH-GGG-CHHHHHHHHHHHHHHHHHSC
T ss_pred HHHH-hcC-CHHHHHHHHHHHHHHHHHHh
Confidence 3332 223 78999999999999887654
No 24
>d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]}
Probab=51.69 E-value=16 Score=30.64 Aligned_cols=31 Identities=16% Similarity=0.300 Sum_probs=22.3
Q ss_pred CCeeEEEe----------CCCCchHHHH---HHHhCCCeEEEec
Q 011311 125 VKIAGLVL----------DFFCSSMIDT---ANELGVPSYVFFT 155 (489)
Q Consensus 125 ~~~D~VI~----------D~~~~~~~~v---A~~lgiP~v~~~~ 155 (489)
.+||+||+ |.++++++.+ |..+|||.+.++.
T Consensus 85 ~~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~gipsiA~S~ 128 (247)
T d1j9ja_ 85 KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CcccEEEecccCCCccchhhhhHHHHHHHHHHHhcCCCcceehh
Confidence 58999996 5566655443 4568999998864
No 25
>d1zl0a2 c.23.16.7 (A:3-169) LD-carboxypeptidase A, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=51.58 E-value=30 Score=26.95 Aligned_cols=75 Identities=15% Similarity=0.308 Sum_probs=54.9
Q ss_pred CCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHHh-ccCCcceE
Q 011311 298 SFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEVL-AHSAIGGF 376 (489)
Q Consensus 298 ~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~iL-~~~~~~~~ 376 (489)
..+.+...++..++...+++.||..++.- +-.++.++++...+- .+|.. |
T Consensus 59 gtd~~Ra~dL~~a~~dp~i~aI~~~rGGy---------------------------Ga~rlL~~lD~~~i~~~~pK~--~ 109 (167)
T d1zl0a2 59 GTVEQRLEDLHNAFDMPDITAVWCLRGGY---------------------------GCGQLLPGLDWGRLQAASPRP--L 109 (167)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSS---------------------------CGGGGTTTCCHHHHHHSCCCC--E
T ss_pred CCHHHHHHHHHHhccCcCCCEEEECccHH---------------------------HHHHHHhhcchhhhhhcCCCE--E
Confidence 44556688899999999999999998761 223566777777774 78877 9
Q ss_pred EecCCchhHHHHH-HhCCcEEeccCc
Q 011311 377 VSHCGWNSILESV-WFGVPIVTWPIY 401 (489)
Q Consensus 377 i~HgG~~s~~eal-~~GvP~v~~P~~ 401 (489)
|-+.-...++.++ .+|++.+-=|+.
T Consensus 110 iGySDiTaL~~~l~k~G~~t~HGPm~ 135 (167)
T d1zl0a2 110 IGFSDISVLLSAFHRHGLPAIHGPVA 135 (167)
T ss_dssp EECGGGHHHHHHHHHTTCCEEECCCG
T ss_pred EEecHHHHHHHHHHHhCCCEEeCccc
Confidence 9888887777664 357777766653
No 26
>d1efpb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Paracoccus denitrificans [TaxId: 266]}
Probab=50.15 E-value=65 Score=26.61 Aligned_cols=30 Identities=17% Similarity=-0.004 Sum_probs=23.1
Q ss_pred CeeEEEe-----CCCCc-hHHHHHHHhCCCeEEEec
Q 011311 126 KIAGLVL-----DFFCS-SMIDTANELGVPSYVFFT 155 (489)
Q Consensus 126 ~~D~VI~-----D~~~~-~~~~vA~~lgiP~v~~~~ 155 (489)
++|+|++ |.... -+..+|+.||+|++.+..
T Consensus 113 ~~DLIl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~ 148 (246)
T d1efpb_ 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (246)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEEeeeccccccchhHHHHHHhhccceeEEE
Confidence 6899996 44333 567899999999988754
No 27
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}
Probab=48.60 E-value=20 Score=28.42 Aligned_cols=27 Identities=19% Similarity=0.193 Sum_probs=23.1
Q ss_pred cceEEecCC------chhHHHHHHhCCcEEecc
Q 011311 373 IGGFVSHCG------WNSILESVWFGVPIVTWP 399 (489)
Q Consensus 373 ~~~~i~HgG------~~s~~eal~~GvP~v~~P 399 (489)
.++++.|+| .+.+.+|...++|+|++-
T Consensus 68 ~gv~~~t~GpG~~n~~~gi~~A~~~~~Pvl~is 100 (181)
T d1ozha2 68 AGVALVTSGPGCSNLITGMATANSEGDPVVALG 100 (181)
T ss_dssp CEEEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred ccceeeccchhhhhhhhhHHHHhhcCCceeeee
Confidence 445999999 668999999999999976
No 28
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=45.73 E-value=11 Score=26.38 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=28.8
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLV 49 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~ 49 (489)
|++..||-|+-.++.| |-+||+.| +++| ++|+-.-
T Consensus 5 ~~~~~~ihfiGigG~G----Ms~LA~~L--~~~G--------~~VsGSD 39 (96)
T d1p3da1 5 MRRVQQIHFIGIGGAG----MSGIAEIL--LNEG--------YQISGSD 39 (96)
T ss_dssp CTTCCEEEEETTTSTT----HHHHHHHH--HHHT--------CEEEEEE
T ss_pred chhCCEEEEEEECHHH----HHHHHHHH--HhCC--------CEEEEEe
Confidence 4556789999999988 67899999 9999 7687663
No 29
>d1jx7a_ c.114.1.1 (A:) Hypothetical protein YchN {Escherichia coli [TaxId: 562]}
Probab=43.86 E-value=12 Score=27.07 Aligned_cols=28 Identities=14% Similarity=0.373 Sum_probs=21.8
Q ss_pred cCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 16 GHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 16 GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
.+.+-.+.+|..+ .++| |+++|+++-..
T Consensus 16 ~~~~~al~~A~a~--~~~~------~~~eV~vff~~ 43 (117)
T d1jx7a_ 16 ESLFNSLRLAIAL--REQE------SNLDLRLFLMS 43 (117)
T ss_dssp SHHHHHHHHHHHH--HHHC------TTCEEEEEECG
T ss_pred HHHHHHHHHHHHH--HhcC------CCCcEEEEEec
Confidence 3566668899999 8888 77789888655
No 30
>d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]}
Probab=42.13 E-value=71 Score=24.69 Aligned_cols=142 Identities=19% Similarity=0.254 Sum_probs=74.4
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHHHH
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQKEV 367 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~~i 367 (489)
.|-|-+||. -+....+++.+.|+.+|..+-..+-... ..|..+. +++.+
T Consensus 2 kV~Ii~Gs~--SD~~~~~~a~~~L~~~gi~~~~~v~saH----------------r~p~rl~----------~~~~~--- 50 (169)
T d1o4va_ 2 RVGIIMGSD--SDLPVMKQAAEILEEFGIDYEITIVSAH----------------RTPDRMF----------EYAKN--- 50 (169)
T ss_dssp EEEEEESCG--GGHHHHHHHHHHHHHTTCEEEEEECCTT----------------TCHHHHH----------HHHHH---
T ss_pred eEEEEECcH--hhHHHHHHHHHHHHHcCCcEEEEEeeee----------------cCHHHHH----------HHHHH---
Confidence 455567773 3667888999999999988766654431 1222211 11111
Q ss_pred hccCCcceEEecCCch----hHHHHHHhCCcEEeccCcchh---hHHHHHHHHh-hCeEEEe-eeccccCCCCccCHHHH
Q 011311 368 LAHSAIGGFVSHCGWN----SILESVWFGVPIVTWPIYAEQ---QINAFQMVRD-LGLAVEL-RLDYRRGTENHVMADEL 438 (489)
Q Consensus 368 L~~~~~~~~i~HgG~~----s~~eal~~GvP~v~~P~~~DQ---~~na~~v~~~-~G~G~~l-~~~~~~~~~~~~~~~~l 438 (489)
+....++.||.=.|.- ++..++ .-+|+|.+|..... .+.---+++. -|+++.. ..+ +-.++.-+
T Consensus 51 ~~~~~~~viIa~AG~aa~LpgvvA~~-t~~PVIgvP~~~~~~~G~daLlS~lqmp~gvpVatV~Id------~~~nAA~~ 123 (169)
T d1o4va_ 51 AEERGIEVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAIN------NAKNAGIL 123 (169)
T ss_dssp TTTTTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTT------CHHHHHHH
T ss_pred HHhcCCeEEEEeecCCcCchHHHHHh-cceeEEecccccccCccHHHHHHhccCCccCCceeeecC------chHHHHHH
Confidence 1111223366555533 333333 35799999986443 2222122221 2555432 111 13344444
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHhc
Q 011311 439 ARAVGCVMDGDSEVRKRVKEVSEKARLALRD 469 (489)
Q Consensus 439 ~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~ 469 (489)
+..|- -+. |++++++.++.++.+++.+.+
T Consensus 124 A~~Il-~l~-d~~i~~kl~~~r~~~~~~v~~ 152 (169)
T d1o4va_ 124 AASIL-GIK-YPEIARKVKEYKERMKREVLE 152 (169)
T ss_dssp HHHHH-HTT-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-hCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 44443 223 688888888888888776543
No 31
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=40.99 E-value=44 Score=24.72 Aligned_cols=62 Identities=11% Similarity=0.103 Sum_probs=41.1
Q ss_pred HhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 011311 390 WFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGCVMDGDSEVRKRVKEVSEK 462 (489)
Q Consensus 390 ~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~ 462 (489)
.-.+|+|++--..|...-. +..+. |+--.+.+ .++.++|..+|++++. ...+...-+.+.+.
T Consensus 70 ~~~~pvI~lT~~~~~~~~~-~a~~~-Ga~dyl~K--------P~~~~~L~~~i~~~~~-~~~~~~e~~~l~~~ 131 (140)
T d1qkka_ 70 DPDLPMILVTGHGDIPMAV-QAIQD-GAYDFIAK--------PFAADRLVQSARRAEE-KRRLVMENRSLRRA 131 (140)
T ss_dssp CTTSCEEEEECGGGHHHHH-HHHHT-TCCEEEES--------SCCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCCHHHHH-HHHHc-CCCEeecC--------CCCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 4579999998877775544 33455 87666653 6899999999999987 33333333344333
No 32
>d1kzyc2 c.15.1.4 (C:1867-1972) 53BP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.23 E-value=11 Score=26.94 Aligned_cols=27 Identities=22% Similarity=0.343 Sum_probs=22.7
Q ss_pred CeeEEEeCCCCch-HHHHHHHhCCCeEE
Q 011311 126 KIAGLVLDFFCSS-MIDTANELGVPSYV 152 (489)
Q Consensus 126 ~~D~VI~D~~~~~-~~~vA~~lgiP~v~ 152 (489)
..|+||+|..|.. ...-|..+|+|.++
T Consensus 50 ~~DVvvTD~scp~~vl~~a~~~~ipvVS 77 (106)
T d1kzyc2 50 VFDVVVTDPSCPASVLKCAEALQLPVVS 77 (106)
T ss_dssp GCSEEEECTTCCHHHHHHHHHHTCCEEC
T ss_pred cccEEEeCCCCCHHHHHHHHHcCCcEee
Confidence 6899999998874 46788899999875
No 33
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]}
Probab=35.89 E-value=11 Score=29.04 Aligned_cols=35 Identities=20% Similarity=0.313 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEc
Q 011311 4 KAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVM 50 (489)
Q Consensus 4 ~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~ 50 (489)
+.||++++.+. | +.|++.++++| .++| .+|+++..
T Consensus 8 ~~kvllIAgG~-G-itPl~sm~~~l--~~~~--------~~v~l~~g 42 (160)
T d1ep3b2 8 TDKILIIGGGI-G-VPPLYELAKQL--EKTG--------CQMTILLG 42 (160)
T ss_dssp TSEEEEEEEGG-G-SHHHHHHHHHH--HHHT--------CEEEEEEE
T ss_pred CCEEEEEEeee-e-HHHHHHHHHHH--Hhcc--------CceEEEEe
Confidence 44777776554 4 99999999999 9999 55777753
No 34
>d2r7ka1 c.30.1.8 (A:1-123) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=34.65 E-value=58 Score=23.64 Aligned_cols=47 Identities=23% Similarity=0.307 Sum_probs=36.8
Q ss_pred hhHHHHhhhcCCCCceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCC
Q 011311 273 RDEIIRWLDDQPASSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKT 325 (489)
Q Consensus 273 ~~~l~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~ 325 (489)
.+++.++|++.....+-.-++||+.. ..++++.++-|.+-+......
T Consensus 4 ~~ei~~il~~Yd~~~i~I~t~~SHSA------LqIl~GAk~EGF~Tv~ic~kg 50 (123)
T d2r7ka1 4 KDEILEIFDKYNKDEITIATLGSHTS------LHILKGAKLEGFSTVCITMKG 50 (123)
T ss_dssp HHHHHHHHTTSCTTSCEEEEESSTTH------HHHHHHHHHTTCCEEEEECTT
T ss_pred HHHHHHHHHhcCccccEEEEEecchH------HHHhhhHHHcCCcEEEEecCC
Confidence 56888999987655677778999875 468899999999888776543
No 35
>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}
Probab=33.22 E-value=8.8 Score=31.84 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=31.2
Q ss_pred cEEEEEcCCCccCHHHH------------HHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 5 AELVFIPSPSVGHLVSV------------IVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 5 ~~i~~~~~~~~GHi~P~------------l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
.+|++...|++-++.|. .+||+++ .++| ++||+++++
T Consensus 7 ~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~--~~~G--------a~V~li~g~ 55 (223)
T d1u7za_ 7 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAA--ARRG--------ANVTLVSGP 55 (223)
T ss_dssp CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHH--HHTT--------CEEEEEECS
T ss_pred CEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHH--HHcC--------Cchhhhhcc
Confidence 46888888888888774 7899999 9999 779999876
No 36
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}
Probab=33.07 E-value=51 Score=26.24 Aligned_cols=105 Identities=13% Similarity=0.045 Sum_probs=62.0
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHH
Q 011311 286 SSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQK 365 (489)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~ 365 (489)
+.+..|++|.+. .++++.++..|.+++..-... - .... .. ...+.+-.
T Consensus 44 k~vgIiG~G~IG-------~~va~~l~~fg~~V~~~d~~~------------------~-~~~~---~~---~~~~~~l~ 91 (197)
T d1j4aa1 44 QVVGVVGTGHIG-------QVFMQIMEGFGAKVITYDIFR------------------N-PELE---KK---GYYVDSLD 91 (197)
T ss_dssp SEEEEECCSHHH-------HHHHHHHHHTTCEEEEECSSC------------------C-HHHH---HT---TCBCSCHH
T ss_pred CeEEEecccccc-------hhHHHhHhhhcccccccCccc------------------c-cccc---cc---eeeecccc
Confidence 358899999876 567777778899887542211 0 1110 01 12345678
Q ss_pred HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHHHH
Q 011311 366 EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLAVELRLDYRRGTENHVMADELARAVGC 444 (489)
Q Consensus 366 ~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai~~ 444 (489)
++|+.+++ ++.|+-.+.- .....|.+.+...-.-++.++.. +++.++.+.|.+++++
T Consensus 92 ~~l~~sDi--i~~~~plt~~----------------T~~li~~~~l~~mk~~a~lIN~s----RG~ivde~aL~~aL~~ 148 (197)
T d1j4aa1 92 DLYKQADV--ISLHVPDVPA----------------NVHMINDESIAKMKQDVVIVNVS----RGPLVDTDAVIRGLDS 148 (197)
T ss_dssp HHHHHCSE--EEECSCCCGG----------------GTTCBSHHHHHHSCTTEEEEECS----CGGGBCHHHHHHHHHH
T ss_pred cccccccc--ccccCCcccc----------------ccccccHHHHhhhCCccEEEecC----chhhhhhHHHHHHHhc
Confidence 89999998 8877755421 12344555553331223444432 2247888888888864
No 37
>d1qzua_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.42 E-value=27 Score=27.61 Aligned_cols=40 Identities=23% Similarity=0.352 Sum_probs=30.4
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhh-cCCCCCCCCeEEEEEEEcC
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLD-RDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~-rG~~~~~~h~~~Vt~~~~~ 51 (489)
|.+|.||++.-.++-.=.. ...|.++| .+ .| ++|.++.++
T Consensus 1 m~~k~~Ill~vtGSIAayk-~~~lv~~L--~~~~g--------~~V~vi~T~ 41 (181)
T d1qzua_ 1 MERKFHVLVGVTGSVAALK-LPLLVSKL--LDIPG--------LEVAVVTTE 41 (181)
T ss_dssp CCSSEEEEEEECSSGGGGT-HHHHHHHH--C---C--------EEEEEEECT
T ss_pred CCCCCEEEEEEecHHHHHH-HHHHHHHH--HHHcC--------CEEEEEECh
Confidence 6678999999888776554 56788888 77 49 889999776
No 38
>d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=31.80 E-value=52 Score=27.76 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=21.3
Q ss_pred CCeeEEEe----------CC-CCchHHH---HHHHhCCCeEEEec
Q 011311 125 VKIAGLVL----------DF-FCSSMID---TANELGVPSYVFFT 155 (489)
Q Consensus 125 ~~~D~VI~----------D~-~~~~~~~---vA~~lgiP~v~~~~ 155 (489)
.+||+||+ |. +.++++. -|..+|||.+.++.
T Consensus 83 ~~pDlVvSGIN~G~N~G~dv~~~SGTVgAA~Ea~~~GipsIA~S~ 127 (276)
T d1l5xa_ 83 RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSA 127 (276)
T ss_dssp SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEECCcCCccCCceeEEechHHHHHHHHHhcCCCceeeee
Confidence 48999996 44 3354443 35578999999864
No 39
>d1cbka_ d.58.30.1 (A:) 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK {Haemophilus influenzae [TaxId: 727]}
Probab=31.53 E-value=27 Score=26.98 Aligned_cols=32 Identities=13% Similarity=0.252 Sum_probs=23.6
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhcC-CeEE
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKSG-VRFL 319 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~~-~~~v 319 (489)
.+|+++||....+...+...+..|++.+ ..++
T Consensus 3 ~ayi~lGSNlg~~~~~l~~a~~~L~~~~~~~i~ 35 (160)
T d1cbka_ 3 TAYIALGSNLNTPVEQLHAALKAISQLSNTHLV 35 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEEEecCcCcHHHHHHHHHHHHHcCCCCcEE
Confidence 6899999976555567888888888764 3443
No 40
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=29.82 E-value=30 Score=23.67 Aligned_cols=82 Identities=15% Similarity=0.103 Sum_probs=51.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhhccCCCCCCCeEEEEcCCC
Q 011311 7 LVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLAGAGATADVSIRFIGVPKM 86 (489)
Q Consensus 7 i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~ 86 (489)
|-|+-.++.| |-+||+.| +++| ++|+-.=-.. ....+.++ ..|+.+.. ..
T Consensus 4 ihfiGIgG~G----Ms~LA~~L--~~~G--------~~VsGSD~~~--------~~~t~~L~------~~Gi~i~~-gh- 53 (89)
T d1j6ua1 4 IHFVGIGGIG----MSAVALHE--FSNG--------NDVYGSNIEE--------TERTAYLR------KLGIPIFV-PH- 53 (89)
T ss_dssp EEEETTTSHH----HHHHHHHH--HHTT--------CEEEEECSSC--------CHHHHHHH------HTTCCEES-SC-
T ss_pred EEEEeECHHH----HHHHHHHH--HhCC--------CeEEEEeCCC--------ChhHHHHH------HCCCeEEe-ee-
Confidence 8888888877 78899999 9999 7677663221 14455565 34555421 10
Q ss_pred CCCCCCCCCChHHHHHHHHHHhhHHHHHHHHHHHhcCCCCeeEEEeCCCCc---hHHHHHHHhCCCeE
Q 011311 87 NPPPLDYFKSPEKFITEYVDSHKDCIKEAIIEHVLNNNVKIAGLVLDFFCS---SMIDTANELGVPSY 151 (489)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~VI~D~~~~---~~~~vA~~lgiP~v 151 (489)
. .+ + + ..+|+||+.+-.. .-+..|+++|||.+
T Consensus 54 -~--~~---~----------------------i-----~~~d~vV~SsAI~~~npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 54 -S--AD---N----------------------W-----YDPDLVIKTPAVRDDNPEIVRARMERVPIE 88 (89)
T ss_dssp -C--TT---S----------------------C-----CCCSEEEECTTCCTTCHHHHHHHHTTCCEE
T ss_pred -c--cc---c----------------------c-----CCCCEEEEecCcCCCCHHHHHHHHcCCCcc
Confidence 0 00 1 0 2578888876544 45778999999975
No 41
>d1efvb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.16 E-value=28 Score=29.18 Aligned_cols=30 Identities=30% Similarity=0.260 Sum_probs=23.5
Q ss_pred CeeEEEe-----CCCCc-hHHHHHHHhCCCeEEEec
Q 011311 126 KIAGLVL-----DFFCS-SMIDTANELGVPSYVFFT 155 (489)
Q Consensus 126 ~~D~VI~-----D~~~~-~~~~vA~~lgiP~v~~~~ 155 (489)
++|+|++ |.... -+..+|+.||+|++.+..
T Consensus 113 ~~DLIl~G~~s~D~~tgqVg~~lAe~Lg~P~vt~v~ 148 (252)
T d1efvb_ 113 KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 148 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred CCCEEEEeccchhccCCcHHHHHHHhcCCCceeEEE
Confidence 7899996 54433 568899999999998654
No 42
>d1f9ya_ d.58.30.1 (A:) 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK {Escherichia coli [TaxId: 562]}
Probab=29.11 E-value=33 Score=26.43 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=22.9
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHhhc-CCeE
Q 011311 288 VVFLCFGSMGSFGEEQIQEIASGLEKS-GVRF 318 (489)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~al~~~-~~~~ 318 (489)
++|+++||....+...+...++.|.+. +..+
T Consensus 2 ~ayi~lGSNlGd~~~~l~~A~~~L~~~~~~~~ 33 (158)
T d1f9ya_ 2 VAYIAIGSNLASPLEQVNAALKALGDIPESHI 33 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEE
T ss_pred EEEEEEecccccHHHHHHHHHHHHhcCCCCCe
Confidence 689999997655566788888888775 4443
No 43
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=28.13 E-value=20 Score=30.80 Aligned_cols=40 Identities=20% Similarity=0.351 Sum_probs=32.7
Q ss_pred cCCchhHHH--HHHhCCcEEeccCcchhhHHHHHHHHhhCeE
Q 011311 379 HCGWNSILE--SVWFGVPIVTWPIYAEQQINAFQMVRDLGLA 418 (489)
Q Consensus 379 HgG~~s~~e--al~~GvP~v~~P~~~DQ~~na~~v~~~~G~G 418 (489)
=||||+++. |-.+|+-+.++-...+|...|++.++..|.-
T Consensus 70 GCG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~ 111 (285)
T d1kpga_ 70 GCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENL 111 (285)
T ss_dssp TCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCC
T ss_pred cCcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhh
Confidence 689997664 7778999999999999999998765554654
No 44
>d1wgwa_ a.24.13.1 (A:) Signal recognition particle 54 kDa protein, SRP54 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.22 E-value=61 Score=22.55 Aligned_cols=52 Identities=10% Similarity=0.114 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhhC
Q 011311 436 DELARAVGCVMDGDSEVRKRVKEVSEKARLALRDGGSSYAATGRLIEDLFGS 487 (489)
Q Consensus 436 ~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 487 (489)
+.|..+++.+-....---+....+-+.++.++-+.......+.+|++.+++.
T Consensus 12 ~~i~~a~~~l~~~~~i~E~~I~~~l~eI~~ALLeADVn~~vV~~f~~~Ik~k 63 (99)
T d1wgwa_ 12 RKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSA 63 (99)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 4556666555431111123445555556666666677788888888877654
No 45
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=27.04 E-value=1.6e+02 Score=24.21 Aligned_cols=39 Identities=15% Similarity=0.061 Sum_probs=27.1
Q ss_pred ceEEEeecCCcCCCHH-HHHHHHHHHhhcCCeEEEEecCC
Q 011311 287 SVVFLCFGSMGSFGEE-QIQEIASGLEKSGVRFLWSLRKT 325 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~-~~~~~~~al~~~~~~~vw~~~~~ 325 (489)
..+++..|........ ....+++-+++.+.+-|..+++-
T Consensus 97 ~~illl~g~eP~~~~~~~a~~il~~~~~~gv~~ii~lgg~ 136 (269)
T d2p90a1 97 KPFLMLSGPEPDLRWGDFSNAVVDLVEKFGVENTICLYAA 136 (269)
T ss_dssp CEEEEEEEECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CeEEEEecCCCchhHHHHHHHHHHHHHHcCCcEEEEcCcc
Confidence 3566667776666554 45568888889999888777653
No 46
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]}
Probab=27.01 E-value=56 Score=25.59 Aligned_cols=25 Identities=12% Similarity=0.157 Sum_probs=19.7
Q ss_pred eEEecCC-----chhHHHHHHhCCcEEecc
Q 011311 375 GFVSHCG-----WNSILESVWFGVPIVTWP 399 (489)
Q Consensus 375 ~~i~HgG-----~~s~~eal~~GvP~v~~P 399 (489)
+++|+|. .+.+.+|...++|+|++-
T Consensus 68 v~~t~GpG~~N~~~gl~~A~~~~~Pvl~is 97 (186)
T d1zpda2 68 AVVTYSVGALSAFDAIGGAYAENLPVILIS 97 (186)
T ss_dssp EEECTTTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEeeccccchhhhhhhhhhhhcccceEEEe
Confidence 4777753 337889999999999985
No 47
>d1ls1a1 a.24.13.1 (A:1-88) Signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=26.81 E-value=38 Score=23.13 Aligned_cols=14 Identities=7% Similarity=0.311 Sum_probs=8.9
Q ss_pred ccCHHHHHHHHHHH
Q 011311 432 HVMADELARAVGCV 445 (489)
Q Consensus 432 ~~~~~~l~~ai~~v 445 (489)
.+|+++|.++++++
T Consensus 21 ~i~E~~i~~~l~ei 34 (88)
T d1ls1a1 21 RITEEDLKATLREI 34 (88)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 56777666666554
No 48
>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}
Probab=26.43 E-value=1.4e+02 Score=23.23 Aligned_cols=141 Identities=15% Similarity=0.050 Sum_probs=72.6
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccc-----cc
Q 011311 287 SVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMIC-----GW 361 (489)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-----~w 361 (489)
.+++.--||+... ...++++.|++.+..+-.++.... .+.++....+...++++.. ..
T Consensus 8 kIllgvTGsiaa~---k~~~l~~~L~~~g~eV~vv~T~~A--------------~~fi~~~~~~~l~~~~~~~~~~~~~~ 70 (183)
T d1p3y1_ 8 KLLIGICGSISSV---GISSYLLYFKSFFKEIRVVMTKTA--------------EDLIPAHTVSYFCDHVYSEHGENGKR 70 (183)
T ss_dssp EEEEEECSCGGGG---GTHHHHHHHTTTSSEEEEEECHHH--------------HHHSCHHHHGGGSSEEECTTCSSSCC
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCeEEEEEEcch--------------hhhccHhHHHHhccceeecccccccc
Confidence 4666667776533 234567777777776655443321 1112221111222222221 12
Q ss_pred cCHHHHhccCCcceEEecCCchhHH-------------HHHHhCCcEEeccCcchh-------hHHHHHHHHhhCeEEEe
Q 011311 362 APQKEVLAHSAIGGFVSHCGWNSIL-------------ESVWFGVPIVTWPIYAEQ-------QINAFQMVRDLGLAVEL 421 (489)
Q Consensus 362 ~pq~~iL~~~~~~~~i~HgG~~s~~-------------eal~~GvP~v~~P~~~DQ-------~~na~~v~~~~G~G~~l 421 (489)
.+|..+-..+++ .+|.-|-+||+. -++.++.|++++|-.... ..|-+++.+. |+-+.-
T Consensus 71 ~~Hi~l~~~aD~-~vIaPaTaNtlaKiA~GiaDnL~t~~~la~~~pvviaPaMn~~M~~np~~~~ni~~L~~~-G~~vi~ 148 (183)
T d1p3y1_ 71 HSHVEIGRWADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKD-GHIVIE 148 (183)
T ss_dssp CCHHHHHHHCSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHH-TCEECC
T ss_pred cCceeccccccE-EEEEecCHHHHHHHHhhhccchhhHHHhhccCceEEEEccchHHHhhhhhHHHHHHHHHC-CCEEeC
Confidence 345555555554 466777766543 348889999999976443 2556666554 876543
Q ss_pred eeccc--------cCCC-CccCHHHHHHHHHHHh
Q 011311 422 RLDYR--------RGTE-NHVMADELARAVGCVM 446 (489)
Q Consensus 422 ~~~~~--------~~~~-~~~~~~~l~~ai~~vl 446 (489)
+.... .+.+ .-.+++++...|++-+
T Consensus 149 P~~~~~g~la~g~~~~g~~~~~p~~i~~~i~~~~ 182 (183)
T d1p3y1_ 149 PVEIMAFEIATGTRKPNRGLITPDKALLAIEKGF 182 (183)
T ss_dssp CBCCC------------CBCCCHHHHHHHHHHHC
T ss_pred CCCCCccccccCCcCCCCCCCCHHHHHHHHHHhc
Confidence 32100 0011 1356677777776544
No 49
>d3clsc1 c.26.2.3 (C:1-262) Small, beta subunit of electron transfer flavoprotein ETFP {Methylophilus methylotrophus [TaxId: 17]}
Probab=25.47 E-value=34 Score=28.80 Aligned_cols=30 Identities=17% Similarity=0.061 Sum_probs=23.1
Q ss_pred CeeEEEe-----CCCCc-hHHHHHHHhCCCeEEEec
Q 011311 126 KIAGLVL-----DFFCS-SMIDTANELGVPSYVFFT 155 (489)
Q Consensus 126 ~~D~VI~-----D~~~~-~~~~vA~~lgiP~v~~~~ 155 (489)
.+|+|++ |.... -+..+|+.||+|++.+..
T Consensus 112 ~~DLIl~G~~s~D~~~gqvg~~lAe~Lg~P~vt~v~ 147 (262)
T d3clsc1 112 APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (262)
T ss_dssp CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred CCcEEEEeeeccCCCcchHHHHHHHHcCCceEEEEE
Confidence 7899996 44443 567899999999988654
No 50
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}
Probab=25.23 E-value=42 Score=26.54 Aligned_cols=30 Identities=13% Similarity=0.160 Sum_probs=24.9
Q ss_pred cCCcceEEecCCchhHHHHHHhCCcEEeccCcc
Q 011311 370 HSAIGGFVSHCGWNSILESVWFGVPIVTWPIYA 402 (489)
Q Consensus 370 ~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 402 (489)
++++ +|+.||-.+.+..-. -+|+|-++..+
T Consensus 51 ~~Dv--iISRG~ta~~ir~~~-~iPVV~I~vs~ 80 (186)
T d2pjua1 51 RCDA--IIAAGSNGAYLKSRL-SVPVILIKPSG 80 (186)
T ss_dssp CCSE--EEEEHHHHHHHHTTC-SSCEEEECCCH
T ss_pred CCCE--EEECchHHHHHHHhC-CCCEEEEcCCH
Confidence 4677 999999999888864 69999999864
No 51
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.98 E-value=25 Score=27.49 Aligned_cols=29 Identities=14% Similarity=0.371 Sum_probs=23.6
Q ss_pred ccCCcceEEecCCch------hHHHHHHhCCcEEecc
Q 011311 369 AHSAIGGFVSHCGWN------SILESVWFGVPIVTWP 399 (489)
Q Consensus 369 ~~~~~~~~i~HgG~~------s~~eal~~GvP~v~~P 399 (489)
.++.+ +++|+|.| ++.+|...++|+|++.
T Consensus 66 g~~~v--~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 100 (175)
T d1t9ba2 66 GKPGV--VLVTSGPGATNVVTPMADAFADGIPMVVFT 100 (175)
T ss_dssp SSCEE--EEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCceE--EEEecCcHHHHHHHHHHHHHHcCCCEEEEe
Confidence 34555 88899865 7899999999999876
No 52
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=24.31 E-value=37 Score=27.46 Aligned_cols=39 Identities=8% Similarity=0.103 Sum_probs=28.2
Q ss_pred CcEEEEE-cCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCC
Q 011311 4 KAELVFI-PSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQE 52 (489)
Q Consensus 4 ~~~i~~~-~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~ 52 (489)
+++|+++ -.++.|-.+-...||..+ ..+| ..|.+++...
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~--~~~g--------~kV~lit~Dt 50 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFY--KKKG--------FKVGLVGADV 50 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHHHHH--HHTT--------CCEEEEECCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH--HHCC--------CceEEEEeec
Confidence 4566655 555999999999999999 9999 6699999873
No 53
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=23.06 E-value=20 Score=27.50 Aligned_cols=30 Identities=20% Similarity=0.199 Sum_probs=24.6
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEE
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLV 49 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~ 49 (489)
|| |+|+-.+..| -.+|+.| +++| |+|+.+.
T Consensus 1 Mk----I~iIG~G~mG-----~~lA~~l--~~~g--------~~V~~~d 30 (165)
T d2f1ka2 1 MK----IGVVGLGLIG-----ASLAGDL--RRRG--------HYLIGVS 30 (165)
T ss_dssp CE----EEEECCSHHH-----HHHHHHH--HHTT--------CEEEEEC
T ss_pred CE----EEEEeecHHH-----HHHHHHH--HHCC--------CEEEEEE
Confidence 77 9999888777 4689999 9999 6688763
No 54
>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.42 E-value=37 Score=25.96 Aligned_cols=50 Identities=10% Similarity=0.096 Sum_probs=41.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCCCcccCcchHHHhhhh
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEHTATASDNDAHIKSLA 68 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~~~~~~~~~~~~~~~~ 68 (489)
.+-+|++.+..+-.|-....-++..| ...| ++|..+....+ ...+++.+.
T Consensus 5 ~~gkivi~tv~gD~HdiG~~iv~~~l--~~~G--------~~Vi~LG~~~p------~e~~~~~~~ 54 (156)
T d3bula2 5 TNGKMVIATVKGDVHDIGKNIVGVVL--QCNN--------YEIVDLGVMVP------AEKILRTAK 54 (156)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHH--HTTT--------CEEEECCSSBC------HHHHHHHHH
T ss_pred cCCEEEEEeeCCChhhHHHHHHHHHH--HHCC--------CEEEECCCCCC------HHHHHHHHH
Confidence 45689999999999999999999999 9999 88999976532 335666664
No 55
>d1vbga2 c.8.1.1 (A:383-517) Pyruvate phosphate dikinase, central domain {Maize (Zea mays) [TaxId: 4577]}
Probab=22.35 E-value=33 Score=25.63 Aligned_cols=26 Identities=15% Similarity=0.054 Sum_probs=20.4
Q ss_pred eEEEeCC--CCchHHHHHHHhCCCeEEE
Q 011311 128 AGLVLDF--FCSSMIDTANELGVPSYVF 153 (489)
Q Consensus 128 D~VI~D~--~~~~~~~vA~~lgiP~v~~ 153 (489)
..||++. .++-+..+|+.||||+|+=
T Consensus 64 ~gIVte~GG~tSHaAivARelgiP~VvG 91 (135)
T d1vbga2 64 VGILTERGGMTSHAAVVARGWGKCCVSG 91 (135)
T ss_dssp SEEEESSCCTTSHHHHHHHHTTCCEEEC
T ss_pred eEEEEecCCccchHHHHHHhcCCceEec
Confidence 4577654 6677889999999998863
No 56
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}
Probab=22.26 E-value=21 Score=27.13 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=26.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
|| |+++-.++.|- .+|..| ++.| |+|+++.-.
T Consensus 1 Mk----I~IiGaG~iG~-----~~a~~L--~~~G--------~~V~~~~r~ 32 (167)
T d1ks9a2 1 MK----ITVLGCGALGQ-----LWLTAL--CKQG--------HEVQGWLRV 32 (167)
T ss_dssp CE----EEEECCSHHHH-----HHHHHH--HHTT--------CEEEEECSS
T ss_pred CE----EEEECcCHHHH-----HHHHHH--HHCC--------CceEEEEcC
Confidence 77 99998888774 589999 9999 669999643
No 57
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=22.20 E-value=25 Score=27.93 Aligned_cols=31 Identities=3% Similarity=-0.022 Sum_probs=24.7
Q ss_pred hccCCcceEEecCCchh------HHHHHHhCCcEEeccC
Q 011311 368 LAHSAIGGFVSHCGWNS------ILESVWFGVPIVTWPI 400 (489)
Q Consensus 368 L~~~~~~~~i~HgG~~s------~~eal~~GvP~v~~P~ 400 (489)
-.++.+ ++.|.|.|. +.+|...++|+|++--
T Consensus 64 tg~~~v--~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 100 (188)
T d2ji7a2 64 EGKPGV--CLTVSAPGFLNGVTSLAHATTNCFPMILLSG 100 (188)
T ss_dssp HSSCEE--EEECSHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hcccce--eeccccccccccchhHHHHHHhcccceEEec
Confidence 344555 889999775 4999999999999873
No 58
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=21.96 E-value=40 Score=26.19 Aligned_cols=39 Identities=18% Similarity=0.193 Sum_probs=34.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcC
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQ 51 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~ 51 (489)
++++|++.+.+.-+|-.-.--++..| ...| ++|......
T Consensus 36 r~pkVlla~~g~D~Hd~G~~~va~~l--~~~G--------~eVi~lg~~ 74 (168)
T d7reqa2 36 RRPRILLAKMGQDGHDRGQKVIATAY--ADLG--------FDVDVGPLF 74 (168)
T ss_dssp SCCEEEEECBTTCCCCHHHHHHHHHH--HHTT--------CEEEECCTT
T ss_pred CCCeEEEEeCCccHHHHHHHHHHHHH--HhCC--------cceecCCCc
Confidence 36899999999999999999999999 9999 889887543
No 59
>d1q1va_ a.159.4.1 (A:) DEK C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.65 E-value=60 Score=21.00 Aligned_cols=55 Identities=9% Similarity=0.094 Sum_probs=32.8
Q ss_pred ccCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH-hcC-CChHHHHHHHHHHHhh
Q 011311 432 HVMADELARAVGCVMDGDSEVRKRVKEVSEKARLAL-RDG-GSSYAATGRLIEDLFG 486 (489)
Q Consensus 432 ~~~~~~l~~ai~~vl~~~~~~~~~a~~l~~~~~~~~-~~~-g~~~~~~~~~~~~~~~ 486 (489)
..|.++|..+|+++|.+-.-..--.+.+.+++.+.+ +-. ..-...|++.|..+-.
T Consensus 11 ~ptd~ei~~~i~~IL~~aDL~tvT~K~IR~~LE~~~~g~dL~~rK~~I~~~I~~~Ls 67 (70)
T d1q1va_ 11 PPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS 67 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHCSSSCCSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCHHHhhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHh
Confidence 679999999999999732211111244555555444 222 3445577777776654
No 60
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Probab=21.49 E-value=30 Score=28.07 Aligned_cols=35 Identities=23% Similarity=0.384 Sum_probs=28.5
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEc
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVM 50 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~ 50 (489)
|+.+.+|+++-.+-.| +..|..| +++| ++|+++--
T Consensus 3 ~~~~~kVvVIGaGiaG-----l~~A~~L--~~~G--------~~V~vier 37 (268)
T d1c0pa1 3 MHSQKRVVVLGSGVIG-----LSSALIL--ARKG--------YSVHILAR 37 (268)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHH--HHTT--------CEEEEEES
T ss_pred CCCCCcEEEECccHHH-----HHHHHHH--HHCC--------CCEEEEeC
Confidence 5566789999888776 8889999 9999 67999953
No 61
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.36 E-value=33 Score=29.37 Aligned_cols=41 Identities=17% Similarity=0.393 Sum_probs=33.3
Q ss_pred cCCchhHHHH--HHhCCcEEeccCcchhhHHHHHHHHhhCeEE
Q 011311 379 HCGWNSILES--VWFGVPIVTWPIYAEQQINAFQMVRDLGLAV 419 (489)
Q Consensus 379 HgG~~s~~ea--l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~ 419 (489)
=||||+++.- -.+|+-++++-...+|...|+..++..|+..
T Consensus 69 GCG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~ 111 (291)
T d1kpia_ 69 GCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPR 111 (291)
T ss_dssp TCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSS
T ss_pred cCcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccch
Confidence 6899988863 4689999999999999999888777667653
No 62
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}
Probab=21.26 E-value=30 Score=27.18 Aligned_cols=32 Identities=22% Similarity=0.386 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEE
Q 011311 3 EKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLV 49 (489)
Q Consensus 3 ~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~ 49 (489)
.+.+|+++-.+-.| |.-|..| +++| |+||++=
T Consensus 42 ~~k~V~IIGaGPAG-----L~AA~~l--a~~G--------~~Vtl~E 73 (179)
T d1ps9a3 42 QKKNLAVVGAGPAG-----LAFAINA--AARG--------HQVTLFD 73 (179)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHH--HTTT--------CEEEEEE
T ss_pred CCcEEEEECccHHH-----HHHHHHH--Hhhc--------cceEEEe
Confidence 35688888888777 8999999 9999 6799994
No 63
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=21.26 E-value=45 Score=26.99 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=33.1
Q ss_pred CCcEEEEE-cCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEcCCC
Q 011311 3 EKAELVFI-PSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVMQEH 53 (489)
Q Consensus 3 ~~~~i~~~-~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~~~~ 53 (489)
.+++|.++ -..+.|-.+-...||..+ ..+| ..|.+++....
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~--~~~~--------~kV~lit~Dt~ 50 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMF--VDEG--------KSVVLAAADTF 50 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHH--HHTT--------CCEEEEEECTT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH--HHCC--------CceEEEeeccc
Confidence 35666555 455999999999999999 9999 66999998743
No 64
>d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]}
Probab=21.17 E-value=52 Score=24.05 Aligned_cols=26 Identities=19% Similarity=0.206 Sum_probs=16.1
Q ss_pred EEEEcCCCccC-HHHHHHHHHHHhhhhcC
Q 011311 7 LVFIPSPSVGH-LVSVIVFAKRLLLLDRD 34 (489)
Q Consensus 7 i~~~~~~~~GH-i~P~l~la~~L~~~~rG 34 (489)
|++...|-.++ ..-.+.+|+.+ .++|
T Consensus 5 i~v~~~P~~~~~a~~A~~fA~aa--l~~G 31 (128)
T d2d1pa1 5 IVVTGPAYGTQQASSAFQFAQAL--IADG 31 (128)
T ss_dssp EEECSCSSSSSHHHHHHHHHHHH--HHTT
T ss_pred EEEecCCCCcHHHHHHHHHHHHH--HhCC
Confidence 34444443222 34457889999 9999
No 65
>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.59 E-value=20 Score=24.78 Aligned_cols=23 Identities=9% Similarity=0.160 Sum_probs=20.8
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcC
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRD 34 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG 34 (489)
|| |+++-.+++-| +||+.| .+..
T Consensus 1 Mk----VLviGsGgREH-----Aia~~l--~~s~ 23 (90)
T d1vkza2 1 VR----VHILGSGGREH-----AIGWAF--AKQG 23 (90)
T ss_dssp CE----EEEEECSHHHH-----HHHHHH--HHTT
T ss_pred CE----EEEECCCHHHH-----HHHHHH--hcCC
Confidence 77 99999999999 679999 8888
No 66
>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}
Probab=20.48 E-value=40 Score=27.65 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=27.5
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEEc
Q 011311 1 MKEKAELVFIPSPSVGHLVSVIVFAKRLLLLDRDNAAGSNNSFSITVLVM 50 (489)
Q Consensus 1 M~~~~~i~~~~~~~~GHi~P~l~la~~L~~~~rG~~~~~~h~~~Vt~~~~ 50 (489)
|| |++++.++.| =-.++|++| +++| ++|.++.-
T Consensus 1 mk----VvlITGas~G---IG~aiA~~l--a~~G--------a~V~~~~~ 33 (257)
T d1fjha_ 1 MS----IIVISGCATG---IGAATRKVL--EAAG--------HQIVGIDI 33 (257)
T ss_dssp CC----EEEEETTTSH---HHHHHHHHH--HHTT--------CEEEEEES
T ss_pred CC----EEEEeCCCCH---HHHHHHHHH--HHCC--------CEEEEEEC
Confidence 88 9999999887 467899999 9999 77877753
No 67
>d2cyua1 a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=20.22 E-value=35 Score=19.30 Aligned_cols=33 Identities=6% Similarity=0.154 Sum_probs=21.6
Q ss_pred HHHHHHhhCeEEEeeeccccCCCCccCHHHHHHHH
Q 011311 408 AFQMVRDLGLAVELRLDYRRGTENHVMADELARAV 442 (489)
Q Consensus 408 a~~v~~~~G~G~~l~~~~~~~~~~~~~~~~l~~ai 442 (489)
|+++++..|+- +..-...+++++++.+++.+.+
T Consensus 5 arkla~e~gid--l~~i~GtG~~GRI~k~Dv~~~i 37 (39)
T d2cyua1 5 IRRLLAEHNLD--ASAIKGTGVGGRLTREDVEKHL 37 (39)
T ss_dssp HHHHHHHHTCC--GGGSCCCSSSSCCCHHHHHHHS
T ss_pred HHHHHHHcCCC--HHHCcCCCCCCcEeHHHHHHHH
Confidence 56666665763 3333344566799999998765
No 68
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=20.07 E-value=1.8e+02 Score=22.31 Aligned_cols=102 Identities=16% Similarity=0.159 Sum_probs=60.3
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCcccccccCChhhHhhhcCCCccccccCHH
Q 011311 286 SSVVFLCFGSMGSFGEEQIQEIASGLEKSGVRFLWSLRKTPPKDRPEMPGEYTCVEDILPRGFQERSKGRGMICGWAPQK 365 (489)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~al~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~w~pq~ 365 (489)
+.+..+++|.+. .++++-+...+.+++.--.... .+. .....+..-.
T Consensus 45 ~~vgiiG~G~IG-------~~va~~l~~fg~~v~~~d~~~~-----------------~~~---------~~~~~~~~l~ 91 (188)
T d1sc6a1 45 KKLGIIGYGHIG-------TQLGILAESLGMYVYFYDIENK-----------------LPL---------GNATQVQHLS 91 (188)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTCEEEEECSSCC-----------------CCC---------TTCEECSCHH
T ss_pred eEEEEeecccch-------hhhhhhcccccceEeecccccc-----------------chh---------hhhhhhhhHH
Confidence 357888888755 4456666677988776543221 000 1223455778
Q ss_pred HHhccCCcceEEecCCchhHHHHHHhCCcEEeccCcchhhHHHHHHHHhhCeE-EEeeeccccCCCCccCHHHHHHHHH
Q 011311 366 EVLAHSAIGGFVSHCGWNSILESVWFGVPIVTWPIYAEQQINAFQMVRDLGLA-VELRLDYRRGTENHVMADELARAVG 443 (489)
Q Consensus 366 ~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G-~~l~~~~~~~~~~~~~~~~l~~ai~ 443 (489)
++|+.+++ ++.|+..+.- ..+..|++.+... +=| +.+... +++.++.++|.++++
T Consensus 92 ell~~sDi--i~i~~plt~~----------------T~~li~~~~l~~m-k~~a~lIN~a----RG~lvde~aL~~aL~ 147 (188)
T d1sc6a1 92 DLLNMSDV--VSLHVPENPS----------------TKNMMGAKEISLM-KPGSLLINAS----RGTVVDIPALADALA 147 (188)
T ss_dssp HHHHHCSE--EEECCCSSTT----------------TTTCBCHHHHHHS-CTTEEEEECS----CSSSBCHHHHHHHHH
T ss_pred HHHhhccc--eeecccCCcc----------------hhhhccHHHHhhC-CCCCEEEEcC----cHHhhhhHHHHHHHH
Confidence 89999998 8878765521 1244455554333 333 334432 234788888888886
No 69
>d1h6za2 c.8.1.1 (A:406-537) Pyruvate phosphate dikinase, central domain {Trypanosoma brucei [TaxId: 5691]}
Probab=20.00 E-value=46 Score=24.65 Aligned_cols=27 Identities=15% Similarity=0.053 Sum_probs=20.8
Q ss_pred eeEEEeCC--CCchHHHHHHHhCCCeEEE
Q 011311 127 IAGLVLDF--FCSSMIDTANELGVPSYVF 153 (489)
Q Consensus 127 ~D~VI~D~--~~~~~~~vA~~lgiP~v~~ 153 (489)
...||++. .++.+..+|+.||||+++=
T Consensus 64 a~givte~GG~tSHaAivARelgiP~VvG 92 (132)
T d1h6za2 64 ACGILTARGGMTSHAAVVARGMGKCCVSG 92 (132)
T ss_dssp SSEEEESSCCTTCHHHHHHHHTTCCEEEC
T ss_pred hccceecccccchHHHHHHhhcCCceEec
Confidence 35677654 6667889999999998863
Done!