Query 011313
Match_columns 489
No_of_seqs 325 out of 2311
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 05:33:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011313.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011313hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ctr_A DNAJ homolog subfamily 99.8 1.7E-19 5.7E-24 150.6 9.1 77 3-84 4-80 (88)
2 2ej7_A HCG3 gene; HCG3 protein 99.8 1.4E-19 4.9E-24 148.5 7.5 75 3-80 6-80 (82)
3 1hdj_A Human HSP40, HDJ-1; mol 99.8 1.5E-19 5E-24 147.0 7.2 71 6-81 3-73 (77)
4 1bq0_A DNAJ, HSP40; chaperone, 99.8 5.5E-20 1.9E-24 157.7 4.2 74 5-82 2-75 (103)
5 2dmx_A DNAJ homolog subfamily 99.8 2.4E-19 8.4E-24 150.5 7.8 77 3-82 6-82 (92)
6 2ctw_A DNAJ homolog subfamily 99.8 2E-19 6.7E-24 156.1 5.3 96 2-106 13-108 (109)
7 2ctp_A DNAJ homolog subfamily 99.8 4.2E-19 1.5E-23 144.5 6.7 70 4-78 5-74 (78)
8 2lgw_A DNAJ homolog subfamily 99.8 4.8E-19 1.6E-23 151.4 7.2 74 6-82 2-75 (99)
9 2cug_A Mkiaa0962 protein; DNAJ 99.8 5.3E-19 1.8E-23 147.5 6.9 70 3-77 14-83 (88)
10 2dn9_A DNAJ homolog subfamily 99.8 6.2E-19 2.1E-23 143.7 6.8 72 3-78 4-75 (79)
11 2o37_A Protein SIS1; HSP40, J- 99.7 1.7E-18 5.7E-23 145.7 6.9 72 5-83 7-78 (92)
12 2och_A Hypothetical protein DN 99.7 2.5E-18 8.6E-23 138.4 7.1 67 4-77 6-72 (73)
13 2ctq_A DNAJ homolog subfamily 99.7 2.1E-18 7.2E-23 150.2 6.6 73 4-80 18-90 (112)
14 1wjz_A 1700030A21RIK protein; 99.7 1.6E-18 5.4E-23 145.6 5.4 74 4-77 14-89 (94)
15 2yua_A Williams-beuren syndrom 99.7 3.8E-18 1.3E-22 145.4 7.6 69 4-76 15-83 (99)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 1E-17 3.6E-22 144.8 5.6 74 3-77 12-86 (109)
17 3apq_A DNAJ homolog subfamily 99.7 2.7E-17 9.2E-22 154.7 6.2 73 6-82 2-74 (210)
18 2l6l_A DNAJ homolog subfamily 99.7 4.8E-17 1.6E-21 148.8 6.5 75 4-78 8-84 (155)
19 2ys8_A RAB-related GTP-binding 99.7 6.2E-17 2.1E-21 135.8 5.1 62 5-71 26-87 (90)
20 3hho_A CO-chaperone protein HS 99.6 1.2E-16 4.1E-21 149.4 6.9 75 3-77 1-78 (174)
21 3lz8_A Putative chaperone DNAJ 99.6 5E-17 1.7E-21 165.9 0.0 68 5-77 27-94 (329)
22 1fpo_A HSC20, chaperone protei 99.6 4.8E-16 1.6E-20 145.1 6.2 71 7-77 2-75 (171)
23 1gh6_A Large T antigen; tumor 99.6 1.4E-16 5E-21 139.6 0.5 65 5-77 7-73 (114)
24 1iur_A KIAA0730 protein; DNAJ 99.6 5.9E-16 2E-20 129.8 3.4 62 5-69 15-76 (88)
25 3bvo_A CO-chaperone protein HS 99.6 2E-15 6.7E-20 145.0 6.9 73 4-76 41-116 (207)
26 3ag7_A Putative uncharacterize 99.6 1.1E-15 3.6E-20 132.4 4.3 63 4-67 39-104 (106)
27 1n4c_A Auxilin; four helix bun 99.6 1.6E-15 5.4E-20 142.9 4.7 66 6-72 117-182 (182)
28 1faf_A Large T antigen; J doma 99.5 1.3E-15 4.3E-20 125.1 2.7 60 6-73 11-72 (79)
29 2qwo_B Putative tyrosine-prote 99.5 2.9E-15 9.8E-20 126.7 4.0 58 6-65 33-91 (92)
30 2pf4_E Small T antigen; PP2A, 99.5 1.1E-15 3.7E-20 143.1 0.5 65 5-77 10-76 (174)
31 3uo3_A J-type CO-chaperone JAC 99.5 4.5E-15 1.5E-19 139.8 3.8 67 3-76 8-81 (181)
32 3apo_A DNAJ homolog subfamily 99.5 5.6E-15 1.9E-19 164.0 2.3 76 4-83 19-94 (780)
33 2guz_A Mitochondrial import in 99.5 1.1E-14 3.7E-19 117.0 2.6 56 6-69 14-70 (71)
34 2y4t_A DNAJ homolog subfamily 98.9 1.5E-09 5.2E-14 108.3 5.6 69 5-74 381-449 (450)
35 2guz_B Mitochondrial import in 98.4 1.9E-07 6.5E-12 74.0 5.0 51 7-65 5-58 (65)
36 1zr9_A Zinc finger protein 593 98.1 8.6E-07 3E-11 78.6 3.0 35 222-256 49-83 (124)
37 1zu1_A DSRBP-ZFA, RNA binding 97.6 3.2E-05 1.1E-09 68.3 3.0 36 221-256 91-126 (127)
38 4dgw_A PRE-mRNA-splicing facto 97.4 2.4E-05 8.2E-10 81.7 0.3 69 222-302 291-359 (402)
39 1zu1_A DSRBP-ZFA, RNA binding 96.7 0.00095 3.2E-08 58.9 3.9 37 221-257 30-66 (127)
40 3cw1_L U1 small nuclear ribonu 96.6 0.0018 6.3E-08 52.7 4.4 39 223-261 3-43 (77)
41 3eph_A TRNA isopentenyltransfe 95.2 0.01 3.5E-07 62.1 3.7 37 223-259 360-402 (409)
42 1znf_A 31ST zinc finger from X 93.9 0.032 1.1E-06 33.6 2.3 22 224-245 2-23 (27)
43 2kvf_A Zinc finger and BTB dom 93.4 0.035 1.2E-06 33.8 1.8 23 223-245 3-25 (28)
44 1ard_A Yeast transcription fac 93.4 0.043 1.5E-06 33.4 2.3 23 223-245 2-24 (29)
45 2kvh_A Zinc finger and BTB dom 93.4 0.036 1.2E-06 33.6 1.9 23 223-245 3-25 (27)
46 2kvg_A Zinc finger and BTB dom 92.8 0.045 1.5E-06 33.4 1.7 23 223-245 3-25 (27)
47 1rik_A E6APC1 peptide; E6-bind 92.5 0.05 1.7E-06 33.2 1.6 23 223-245 2-24 (29)
48 2m0d_A Zinc finger and BTB dom 92.4 0.058 2E-06 32.8 1.9 23 223-245 3-25 (30)
49 1rim_A E6APC2 peptide; E6-bind 92.4 0.064 2.2E-06 34.6 2.2 23 223-245 2-24 (33)
50 2m0f_A Zinc finger and BTB dom 92.4 0.06 2E-06 32.6 1.9 23 223-245 2-24 (29)
51 1p7a_A BF3, BKLF, kruppel-like 92.4 0.071 2.4E-06 34.7 2.4 24 222-245 10-33 (37)
52 2lvu_A Zinc finger and BTB dom 91.5 0.025 8.6E-07 34.0 0.0 23 223-245 2-24 (26)
53 2elx_A Zinc finger protein 406 92.3 0.06 2.1E-06 34.4 1.9 24 222-245 6-29 (35)
54 2elr_A Zinc finger protein 406 92.2 0.075 2.6E-06 34.2 2.3 24 222-245 8-31 (36)
55 2elq_A Zinc finger protein 406 92.1 0.065 2.2E-06 34.7 1.9 24 222-245 8-31 (36)
56 1klr_A Zinc finger Y-chromosom 92.0 0.071 2.4E-06 32.4 1.9 23 223-245 2-24 (30)
57 2elv_A Zinc finger protein 406 92.0 0.065 2.2E-06 34.7 1.8 24 222-245 8-31 (36)
58 2elt_A Zinc finger protein 406 92.0 0.068 2.3E-06 34.5 1.9 24 222-245 8-31 (36)
59 2m0e_A Zinc finger and BTB dom 91.9 0.069 2.4E-06 32.2 1.7 23 223-245 2-24 (29)
60 1srk_A Zinc finger protein ZFP 91.6 0.083 2.8E-06 33.9 2.0 24 222-245 6-29 (35)
61 2elo_A Zinc finger protein 406 91.6 0.084 2.9E-06 34.3 2.0 24 222-245 8-31 (37)
62 2els_A Zinc finger protein 406 91.4 0.085 2.9E-06 34.2 1.8 24 222-245 8-31 (36)
63 2lvt_A Zinc finger and BTB dom 90.5 0.039 1.4E-06 33.8 0.0 23 223-245 2-24 (29)
64 2lvr_A Zinc finger and BTB dom 90.3 0.043 1.5E-06 33.6 0.0 23 223-245 3-25 (30)
65 1njq_A Superman protein; zinc- 90.8 0.1 3.5E-06 34.6 1.8 24 222-245 5-28 (39)
66 1paa_A Yeast transcription fac 90.7 0.11 3.6E-06 31.9 1.7 20 223-242 2-21 (30)
67 2elp_A Zinc finger protein 406 90.7 0.093 3.2E-06 34.2 1.5 24 222-245 8-32 (37)
68 2emg_A Zinc finger protein 484 90.6 0.13 4.3E-06 35.3 2.2 24 222-245 11-34 (46)
69 2epv_A Zinc finger protein 268 90.5 0.12 4E-06 35.3 2.0 24 222-245 11-34 (44)
70 2yte_A Zinc finger protein 473 90.5 0.14 4.7E-06 34.3 2.3 24 222-245 9-32 (42)
71 1fu9_A U-shaped transcriptiona 90.4 0.14 4.7E-06 35.8 2.1 24 221-244 6-29 (36)
72 2eos_A B-cell lymphoma 6 prote 90.4 0.12 4.3E-06 34.6 2.0 24 222-245 10-33 (42)
73 2enf_A Zinc finger protein 347 90.1 0.15 5.1E-06 35.0 2.2 24 222-245 11-34 (46)
74 2ep1_A Zinc finger protein 484 90.1 0.15 5.3E-06 34.8 2.3 24 222-245 11-34 (46)
75 2ab3_A ZNF29; zinc finger prot 90.1 0.14 4.8E-06 30.9 1.9 23 223-245 2-26 (29)
76 2en9_A Zinc finger protein 28 90.1 0.15 5.2E-06 35.0 2.3 24 222-245 11-34 (46)
77 2en7_A Zinc finger protein 268 90.0 0.14 4.9E-06 34.5 2.1 24 222-245 11-34 (44)
78 2eq2_A Zinc finger protein 347 90.0 0.16 5.3E-06 34.9 2.3 24 222-245 11-34 (46)
79 2el5_A Zinc finger protein 268 89.9 0.14 4.9E-06 34.2 2.0 24 222-245 9-32 (42)
80 2eon_A ZFP-95, zinc finger pro 89.9 0.15 5E-06 35.2 2.1 24 222-245 11-34 (46)
81 2eou_A Zinc finger protein 473 89.8 0.16 5.3E-06 34.6 2.2 24 222-245 11-34 (44)
82 2emi_A Zinc finger protein 484 89.8 0.15 5E-06 35.0 2.0 24 222-245 11-34 (46)
83 2eor_A Zinc finger protein 224 89.8 0.14 4.7E-06 35.0 1.8 24 222-245 11-34 (46)
84 2eof_A Zinc finger protein 268 89.7 0.14 4.9E-06 34.5 1.9 24 222-245 11-34 (44)
85 2enh_A Zinc finger protein 28 89.7 0.16 5.3E-06 35.0 2.1 24 222-245 11-34 (46)
86 2em3_A Zinc finger protein 28 89.7 0.14 4.8E-06 35.1 1.9 24 222-245 11-34 (46)
87 2emj_A Zinc finger protein 28 89.7 0.14 4.8E-06 35.2 1.9 24 222-245 11-34 (46)
88 2eov_A Zinc finger protein 484 89.7 0.17 5.9E-06 34.5 2.3 24 222-245 11-34 (46)
89 2eoj_A Zinc finger protein 268 89.6 0.15 5.2E-06 34.5 1.9 24 222-245 11-34 (44)
90 2epc_A Zinc finger protein 32; 89.6 0.15 5.1E-06 34.1 1.9 24 222-245 10-33 (42)
91 2eom_A ZFP-95, zinc finger pro 89.6 0.17 5.8E-06 34.9 2.2 24 222-245 11-34 (46)
92 1sp2_A SP1F2; zinc finger, tra 89.5 0.19 6.5E-06 31.3 2.2 23 223-245 2-26 (31)
93 2ytb_A Zinc finger protein 32; 89.5 0.15 5.2E-06 34.0 1.9 24 222-245 10-33 (42)
94 2eoh_A Zinc finger protein 28 89.5 0.17 5.9E-06 34.7 2.2 24 222-245 11-34 (46)
95 2yts_A Zinc finger protein 484 89.4 0.16 5.5E-06 34.7 2.0 24 222-245 11-34 (46)
96 2ept_A Zinc finger protein 32; 89.4 0.16 5.6E-06 33.9 2.0 24 222-245 9-32 (41)
97 2em6_A Zinc finger protein 224 89.4 0.18 6.1E-06 34.6 2.2 24 222-245 11-34 (46)
98 2yti_A Zinc finger protein 347 89.4 0.17 5.8E-06 34.7 2.1 24 222-245 11-34 (46)
99 2emb_A Zinc finger protein 473 89.4 0.17 5.7E-06 34.4 2.0 24 222-245 11-34 (44)
100 2elm_A Zinc finger protein 406 89.4 0.13 4.5E-06 33.8 1.4 23 222-244 8-31 (37)
101 2yrj_A Zinc finger protein 473 89.3 0.15 5.2E-06 34.8 1.8 24 222-245 11-34 (46)
102 2eoz_A Zinc finger protein 473 89.3 0.15 5.2E-06 35.0 1.8 24 222-245 11-34 (46)
103 2eop_A Zinc finger protein 268 89.3 0.19 6.3E-06 34.4 2.2 24 222-245 11-34 (46)
104 2yto_A Zinc finger protein 484 89.3 0.16 5.5E-06 34.9 1.9 24 222-245 11-34 (46)
105 2eq3_A Zinc finger protein 347 89.2 0.17 5.7E-06 34.6 1.9 24 222-245 11-34 (46)
106 2eow_A Zinc finger protein 347 89.2 0.16 5.5E-06 34.7 1.8 24 222-245 11-34 (46)
107 2ytp_A Zinc finger protein 484 89.2 0.16 5.4E-06 34.9 1.8 24 222-245 11-34 (46)
108 2yth_A Zinc finger protein 224 89.2 0.2 6.9E-06 34.4 2.4 24 222-245 11-34 (46)
109 2yrm_A B-cell lymphoma 6 prote 89.2 0.2 6.7E-06 34.1 2.2 24 222-245 9-32 (43)
110 2ytm_A Zinc finger protein 28 89.1 0.2 6.8E-06 34.5 2.3 24 222-245 11-34 (46)
111 1zfd_A SWI5; DNA binding motif 89.1 0.19 6.6E-06 31.4 2.1 23 223-245 3-27 (32)
112 2em4_A Zinc finger protein 28 89.1 0.17 5.7E-06 34.8 1.9 24 222-245 11-34 (46)
113 2emk_A Zinc finger protein 28 89.1 0.21 7.1E-06 34.3 2.4 24 222-245 11-34 (46)
114 2eq1_A Zinc finger protein 347 89.1 0.19 6.3E-06 34.5 2.1 24 222-245 11-34 (46)
115 2epu_A Zinc finger protein 32; 89.0 0.16 5.5E-06 34.7 1.7 24 222-245 11-34 (45)
116 2ytn_A Zinc finger protein 347 89.0 0.22 7.5E-06 34.1 2.4 24 222-245 11-34 (46)
117 2epz_A Zinc finger protein 28 89.0 0.2 6.7E-06 34.3 2.2 24 222-245 11-34 (46)
118 2em5_A ZFP-95, zinc finger pro 89.0 0.17 5.7E-06 34.8 1.8 24 222-245 11-34 (46)
119 2eoy_A Zinc finger protein 473 89.0 0.15 5E-06 35.1 1.5 24 222-245 11-34 (46)
120 2emf_A Zinc finger protein 484 89.0 0.19 6.4E-06 34.6 2.0 24 222-245 11-34 (46)
121 2en2_A B-cell lymphoma 6 prote 88.9 0.16 5.6E-06 34.0 1.7 24 222-245 10-33 (42)
122 2el4_A Zinc finger protein 268 88.9 0.18 6.3E-06 34.4 2.0 24 222-245 11-34 (46)
123 2eoq_A Zinc finger protein 224 88.9 0.2 6.9E-06 34.3 2.2 24 222-245 11-34 (46)
124 2ep3_A Zinc finger protein 484 88.8 0.17 5.9E-06 34.6 1.8 24 222-245 11-34 (46)
125 2emx_A Zinc finger protein 268 88.8 0.18 6.1E-06 34.2 1.9 24 222-245 9-32 (44)
126 2emy_A Zinc finger protein 268 88.8 0.18 6.1E-06 34.6 1.9 24 222-245 11-34 (46)
127 2elz_A Zinc finger protein 224 88.8 0.23 7.9E-06 34.1 2.4 24 222-245 11-34 (46)
128 2ytf_A Zinc finger protein 268 88.8 0.18 6.2E-06 34.4 1.9 24 222-245 11-34 (46)
129 2en3_A ZFP-95, zinc finger pro 88.8 0.16 5.5E-06 34.8 1.6 24 222-245 11-34 (46)
130 3iuf_A Zinc finger protein UBI 88.8 0.17 6E-06 35.6 1.8 23 222-244 6-28 (48)
131 2em0_A Zinc finger protein 224 88.7 0.22 7.5E-06 34.1 2.3 24 222-245 11-34 (46)
132 2eq4_A Zinc finger protein 224 88.7 0.23 7.8E-06 33.9 2.3 24 222-245 11-34 (46)
133 2eml_A Zinc finger protein 28 88.7 0.2 6.7E-06 34.3 2.0 24 222-245 11-34 (46)
134 2ytt_A Zinc finger protein 473 88.6 0.21 7E-06 34.3 2.1 24 222-245 11-34 (46)
135 2emz_A ZFP-95, zinc finger pro 88.6 0.22 7.4E-06 34.2 2.2 24 222-245 11-34 (46)
136 2eoe_A Zinc finger protein 347 88.5 0.22 7.4E-06 34.0 2.1 24 222-245 11-34 (46)
137 2yu5_A Zinc finger protein 473 88.5 0.17 5.8E-06 34.3 1.6 24 222-245 11-34 (44)
138 2ema_A Zinc finger protein 347 88.5 0.2 6.7E-06 34.3 1.9 24 222-245 11-34 (46)
139 2ytr_A Zinc finger protein 347 88.5 0.21 7.3E-06 34.1 2.1 24 222-245 11-34 (46)
140 2em7_A Zinc finger protein 224 88.4 0.21 7.3E-06 34.1 2.0 24 222-245 11-34 (46)
141 2ytj_A Zinc finger protein 484 88.4 0.2 6.8E-06 34.3 1.9 24 222-245 11-34 (46)
142 2ep2_A Zinc finger protein 484 88.4 0.2 6.8E-06 34.3 1.9 24 222-245 11-34 (46)
143 2emh_A Zinc finger protein 484 88.4 0.2 6.8E-06 34.3 1.8 24 222-245 11-34 (46)
144 2ytq_A Zinc finger protein 268 88.4 0.24 8.2E-06 34.0 2.3 24 222-245 11-34 (46)
145 2eq0_A Zinc finger protein 347 88.3 0.19 6.6E-06 34.4 1.8 24 222-245 11-34 (46)
146 2eox_A Zinc finger protein 473 88.3 0.14 4.8E-06 34.8 1.0 24 222-245 11-34 (44)
147 2eme_A Zinc finger protein 473 88.3 0.22 7.4E-06 34.0 2.0 24 222-245 11-34 (46)
148 1fv5_A First zinc finger of U- 88.3 0.21 7.3E-06 34.2 1.9 22 222-243 7-28 (36)
149 2emm_A ZFP-95, zinc finger pro 88.2 0.21 7.1E-06 34.1 1.9 24 222-245 11-34 (46)
150 2ene_A Zinc finger protein 347 88.2 0.2 6.9E-06 34.3 1.8 24 222-245 11-34 (46)
151 1yui_A GAGA-factor; complex (D 88.2 0.2 6.8E-06 35.9 1.8 24 222-245 23-46 (54)
152 2em9_A Zinc finger protein 224 88.2 0.22 7.5E-06 34.0 2.0 24 222-245 11-34 (46)
153 2ely_A Zinc finger protein 224 88.2 0.2 6.9E-06 34.4 1.8 24 222-245 11-34 (46)
154 2eoo_A ZFP-95, zinc finger pro 88.1 0.21 7.3E-06 34.2 1.9 24 222-245 11-34 (46)
155 2ytk_A Zinc finger protein 347 88.1 0.21 7.3E-06 34.2 1.9 24 222-245 11-34 (46)
156 2epw_A Zinc finger protein 268 88.1 0.19 6.4E-06 34.3 1.6 24 222-245 11-34 (46)
157 2em2_A Zinc finger protein 28 88.0 0.22 7.5E-06 34.2 1.9 24 222-245 11-34 (46)
158 2ep0_A Zinc finger protein 28 87.9 0.22 7.5E-06 34.1 1.8 24 222-245 11-34 (46)
159 2epx_A Zinc finger protein 28 87.9 0.26 8.8E-06 33.7 2.2 23 222-244 11-33 (47)
160 2el6_A Zinc finger protein 268 87.8 0.24 8.2E-06 34.0 2.0 24 222-245 11-34 (46)
161 2em8_A Zinc finger protein 224 87.8 0.23 7.8E-06 34.1 1.9 24 222-245 11-34 (46)
162 2emp_A Zinc finger protein 347 87.8 0.23 8E-06 33.9 1.9 24 222-245 11-34 (46)
163 2enc_A Zinc finger protein 224 87.8 0.23 7.9E-06 34.0 1.9 24 222-245 11-34 (46)
164 2epr_A POZ-, at HOOK-, and zin 87.7 0.23 7.9E-06 34.5 1.9 24 222-245 11-34 (48)
165 2en6_A Zinc finger protein 268 87.7 0.23 7.8E-06 34.0 1.8 24 222-245 11-34 (46)
166 2ysp_A Zinc finger protein 224 87.6 0.23 7.7E-06 34.0 1.8 24 222-245 11-34 (46)
167 2epq_A POZ-, at HOOK-, and zin 87.6 0.26 8.9E-06 33.6 2.1 24 222-245 9-32 (45)
168 2ytd_A Zinc finger protein 473 87.6 0.24 8.2E-06 33.9 1.9 24 222-245 11-34 (46)
169 2en1_A Zinc finger protein 224 87.5 0.25 8.5E-06 33.8 1.9 24 222-245 11-34 (46)
170 2en8_A Zinc finger protein 224 87.5 0.24 8.1E-06 33.8 1.8 24 222-245 11-34 (46)
171 3uk3_C Zinc finger protein 217 87.3 0.29 1E-05 34.8 2.2 24 222-245 3-26 (57)
172 4gzn_C ZFP-57, zinc finger pro 87.3 0.24 8.2E-06 37.5 1.8 23 223-245 4-26 (60)
173 2yrk_A Zinc finger homeobox pr 87.2 0.24 8.1E-06 37.6 1.7 32 224-255 14-45 (55)
174 2yso_A ZFP-95, zinc finger pro 87.2 0.26 8.9E-06 33.7 1.8 24 222-245 11-34 (46)
175 1bbo_A Human enhancer-binding 87.1 0.25 8.5E-06 35.2 1.8 25 222-246 28-52 (57)
176 2ytg_A ZFP-95, zinc finger pro 86.9 0.2 7E-06 34.2 1.2 24 222-245 11-34 (46)
177 2yu8_A Zinc finger protein 347 86.9 0.23 7.8E-06 34.0 1.4 24 222-245 11-34 (46)
178 2adr_A ADR1; transcription reg 86.6 0.33 1.1E-05 34.9 2.3 23 223-245 2-24 (60)
179 1va1_A Transcription factor SP 86.6 0.31 1.1E-05 31.9 1.9 24 222-245 7-32 (37)
180 1bbo_A Human enhancer-binding 86.5 0.34 1.2E-05 34.4 2.3 22 224-245 2-23 (57)
181 4gzn_C ZFP-57, zinc finger pro 86.2 0.31 1.1E-05 36.9 2.0 24 222-245 31-54 (60)
182 2eln_A Zinc finger protein 406 86.2 0.33 1.1E-05 33.5 1.9 24 222-245 8-33 (38)
183 2kfq_A FP1; protein, de novo p 86.1 0.057 1.9E-06 34.5 -2.0 23 223-245 2-24 (32)
184 2drp_A Protein (tramtrack DNA- 85.6 0.34 1.2E-05 35.6 1.9 24 222-245 39-62 (66)
185 2epp_A POZ-, at HOOK-, and zin 85.5 0.42 1.4E-05 37.2 2.4 24 222-245 12-35 (66)
186 3uk3_C Zinc finger protein 217 85.2 0.37 1.2E-05 34.3 1.9 24 222-245 31-54 (57)
187 1x5w_A Zinc finger protein 64, 84.5 0.42 1.5E-05 35.7 2.0 24 222-245 8-31 (70)
188 1x6e_A Zinc finger protein 24; 84.4 0.4 1.4E-05 36.1 1.9 24 222-245 41-64 (72)
189 2lce_A B-cell lymphoma 6 prote 84.3 0.53 1.8E-05 35.6 2.5 25 221-245 15-39 (74)
190 2drp_A Protein (tramtrack DNA- 83.8 0.43 1.5E-05 35.0 1.7 24 222-245 9-32 (66)
191 1f2i_G Fusion of N-terminal 17 83.5 0.44 1.5E-05 35.7 1.7 24 222-245 48-71 (73)
192 1x6e_A Zinc finger protein 24; 83.5 0.48 1.7E-05 35.7 1.9 24 222-245 13-36 (72)
193 1bhi_A CRE-BP1, ATF-2; CRE bin 83.4 0.52 1.8E-05 30.6 1.9 24 222-245 5-30 (38)
194 2lce_A B-cell lymphoma 6 prote 83.3 0.47 1.6E-05 35.8 1.8 24 222-245 44-67 (74)
195 2d9h_A Zinc finger protein 692 83.2 0.48 1.6E-05 36.1 1.9 24 222-245 6-29 (78)
196 1x5w_A Zinc finger protein 64, 83.1 0.47 1.6E-05 35.4 1.8 24 222-245 36-59 (70)
197 2ct1_A Transcriptional repress 82.9 0.5 1.7E-05 36.0 1.9 24 222-245 44-67 (77)
198 2gqj_A Zinc finger protein KIA 82.2 0.55 1.9E-05 37.9 1.9 23 223-245 54-76 (98)
199 2lv2_A Insulinoma-associated p 81.5 0.63 2.1E-05 37.7 2.0 24 222-245 27-50 (85)
200 2ct1_A Transcriptional repress 81.2 0.63 2.2E-05 35.4 1.8 24 222-245 14-37 (77)
201 2kmk_A Zinc finger protein GFI 81.0 0.64 2.2E-05 35.2 1.8 24 222-245 56-79 (82)
202 4f9c_B Protein DBF4 homolog A; 80.8 0.79 2.7E-05 41.3 2.6 27 224-253 88-114 (144)
203 3mjh_B Early endosome antigen 80.8 0.77 2.6E-05 31.6 1.9 23 223-245 5-27 (34)
204 2cot_A Zinc finger protein 435 80.6 0.81 2.8E-05 34.8 2.3 25 221-245 16-40 (77)
205 1a1h_A QGSR zinc finger peptid 80.4 0.73 2.5E-05 35.6 2.0 24 222-245 61-84 (90)
206 2eps_A POZ-, at HOOK-, and zin 80.3 0.72 2.5E-05 32.9 1.8 23 222-244 11-33 (54)
207 2adr_A ADR1; transcription reg 80.3 0.71 2.4E-05 33.1 1.8 23 222-244 29-51 (60)
208 2lv2_A Insulinoma-associated p 80.2 0.69 2.4E-05 37.4 1.8 23 222-244 55-77 (85)
209 2ebt_A Krueppel-like factor 5; 80.1 0.84 2.9E-05 36.0 2.3 24 222-245 74-97 (100)
210 2d9h_A Zinc finger protein 692 79.8 0.72 2.5E-05 35.1 1.7 23 222-244 37-59 (78)
211 2cot_A Zinc finger protein 435 79.6 0.81 2.8E-05 34.8 2.0 24 222-245 45-68 (77)
212 2dmd_A Zinc finger protein 64, 78.7 0.81 2.8E-05 35.9 1.8 24 222-245 63-86 (96)
213 1x6h_A Transcriptional repress 78.6 0.88 3E-05 34.8 1.9 24 222-245 46-69 (86)
214 2wbs_A Krueppel-like factor 4; 78.4 0.91 3.1E-05 35.0 2.0 24 222-245 64-87 (89)
215 1llm_C Chimera of ZIF23-GCN4; 78.3 0.89 3.1E-05 35.5 1.9 22 224-245 4-25 (88)
216 1x6h_A Transcriptional repress 78.3 0.89 3E-05 34.8 1.9 24 222-245 14-37 (86)
217 2kmk_A Zinc finger protein GFI 77.9 0.93 3.2E-05 34.2 1.9 22 224-245 2-23 (82)
218 2gqj_A Zinc finger protein KIA 77.7 0.9 3.1E-05 36.6 1.8 24 222-245 23-47 (98)
219 2csh_A Zinc finger protein 297 76.7 1 3.5E-05 36.4 1.9 24 222-245 64-87 (110)
220 2yt9_A Zinc finger-containing 76.6 1.2 4.1E-05 34.8 2.2 23 222-244 64-86 (95)
221 2dmd_A Zinc finger protein 64, 76.6 1.3 4.5E-05 34.6 2.4 24 222-245 7-30 (96)
222 2ej4_A Zinc finger protein ZIC 76.5 1.1 3.9E-05 35.0 2.1 22 224-245 63-84 (95)
223 2dmi_A Teashirt homolog 3; zin 76.0 1.3 4.4E-05 36.1 2.3 26 222-247 79-104 (115)
224 2ee8_A Protein ODD-skipped-rel 75.9 1.2 4.2E-05 35.6 2.2 23 222-244 72-94 (106)
225 2ctd_A Zinc finger protein 512 75.8 1.2 4.3E-05 36.2 2.2 20 223-242 62-81 (96)
226 2ent_A Krueppel-like factor 15 75.8 1.2 4.1E-05 30.3 1.8 24 222-245 11-36 (48)
227 1a1h_A QGSR zinc finger peptid 74.7 1.2 4.2E-05 34.3 1.8 24 222-245 33-56 (90)
228 2yt9_A Zinc finger-containing 74.0 1.3 4.5E-05 34.5 1.8 24 222-245 34-57 (95)
229 2ctd_A Zinc finger protein 512 73.9 1.4 4.7E-05 35.9 2.0 25 221-245 32-57 (96)
230 1llm_C Chimera of ZIF23-GCN4; 73.3 1.4 4.9E-05 34.3 1.8 25 222-246 30-54 (88)
231 2ee8_A Protein ODD-skipped-rel 72.8 1.8 6.1E-05 34.6 2.4 24 222-245 44-67 (106)
232 1wjp_A Zinc finger protein 295 72.8 1.6 5.3E-05 35.3 2.0 22 223-244 69-90 (107)
233 1wjp_A Zinc finger protein 295 72.3 1.9 6.6E-05 34.7 2.5 24 222-245 15-38 (107)
234 2wbt_A B-129; zinc finger; 2.7 71.3 1.9 6.5E-05 35.9 2.3 24 222-245 99-122 (129)
235 2dmi_A Teashirt homolog 3; zin 71.3 1.7 5.8E-05 35.4 1.9 24 222-245 18-41 (115)
236 2lt7_A Transcriptional regulat 71.2 1.6 5.3E-05 37.9 1.7 24 222-245 21-44 (133)
237 1ncs_A Peptide M30F, transcrip 70.1 1.1 3.9E-05 30.9 0.5 24 222-245 17-42 (47)
238 2wbt_A B-129; zinc finger; 2.7 69.8 1.8 6.3E-05 36.0 1.8 24 222-245 73-96 (129)
239 2epa_A Krueppel-like factor 10 69.7 2 6.8E-05 32.0 1.9 25 221-245 15-41 (72)
240 2dlq_A GLI-kruppel family memb 69.6 1.9 6.5E-05 35.1 1.9 24 222-245 65-88 (124)
241 1x6f_A Zinc finger protein 462 69.6 1.9 6.6E-05 34.8 1.9 24 222-245 24-47 (88)
242 2dlq_A GLI-kruppel family memb 68.5 2.5 8.5E-05 34.4 2.4 23 222-244 6-28 (124)
243 2dlk_A Novel protein; ZF-C2H2 68.3 2.2 7.5E-05 32.1 1.9 24 222-245 37-62 (79)
244 2jp9_A Wilms tumor 1; DNA bind 68.3 2.1 7E-05 34.7 1.8 24 222-245 65-88 (119)
245 2e72_A POGO transposable eleme 67.8 2.6 8.9E-05 31.2 2.0 23 222-244 11-33 (49)
246 2eod_A TNF receptor-associated 67.3 2 6.7E-05 31.7 1.4 23 222-245 9-31 (66)
247 2csh_A Zinc finger protein 297 67.3 1.9 6.5E-05 34.8 1.4 24 222-245 36-59 (110)
248 2epa_A Krueppel-like factor 10 66.8 2.3 7.7E-05 31.6 1.6 24 222-245 46-71 (72)
249 2lt7_A Transcriptional regulat 66.8 2.2 7.6E-05 36.8 1.8 24 222-245 77-100 (133)
250 2eod_A TNF receptor-associated 66.6 1.3 4.4E-05 32.8 0.2 24 222-245 35-59 (66)
251 2j7j_A Transcription factor II 66.5 2.5 8.5E-05 31.9 1.8 21 224-244 2-24 (85)
252 1f2i_G Fusion of N-terminal 17 65.4 2.8 9.6E-05 31.1 1.9 24 222-245 18-43 (73)
253 2ghf_A ZHX1, zinc fingers and 64.8 2.2 7.4E-05 35.6 1.3 21 222-242 49-69 (102)
254 2ej4_A Zinc finger protein ZIC 64.4 3.1 0.00011 32.4 2.1 23 223-245 25-47 (95)
255 2rpc_A Zinc finger protein ZIC 64.4 3.3 0.00011 35.4 2.4 25 221-245 23-47 (155)
256 1ubd_C Protein (YY1 zinc finge 64.4 2.9 9.8E-05 34.3 2.0 24 222-245 33-56 (124)
257 2wbs_A Krueppel-like factor 4; 63.7 3.1 0.00011 31.8 2.0 22 223-244 5-28 (89)
258 2ghf_A ZHX1, zinc fingers and 62.2 3.6 0.00012 34.3 2.1 23 222-244 17-39 (102)
259 2j7j_A Transcription factor II 62.0 3.3 0.00011 31.2 1.8 21 224-244 59-82 (85)
260 2ebt_A Krueppel-like factor 5; 60.2 3.8 0.00013 32.0 1.9 25 221-245 13-39 (100)
261 2jp9_A Wilms tumor 1; DNA bind 60.0 3.7 0.00013 33.1 1.8 24 222-245 93-118 (119)
262 2i13_A AART; DNA binding, zinc 59.9 3.4 0.00012 36.6 1.8 24 222-245 160-183 (190)
263 2gli_A Protein (five-finger GL 58.0 4.9 0.00017 34.1 2.4 23 223-245 3-25 (155)
264 1ubd_C Protein (YY1 zinc finge 56.8 4.7 0.00016 32.9 2.0 25 221-245 3-29 (124)
265 2rpc_A Zinc finger protein ZIC 53.5 5.4 0.00018 34.0 1.9 22 224-245 63-84 (155)
266 2dlk_A Novel protein; ZF-C2H2 53.2 6.3 0.00022 29.4 2.0 23 222-244 6-30 (79)
267 2i13_A AART; DNA binding, zinc 52.5 5.6 0.00019 35.2 1.9 24 222-245 132-155 (190)
268 2gli_A Protein (five-finger GL 52.1 5.8 0.0002 33.6 1.9 24 222-245 127-152 (155)
269 1x3c_A Zinc finger protein 292 51.0 7.9 0.00027 31.0 2.3 23 222-244 26-50 (73)
270 2ctu_A Zinc finger protein 483 50.7 1 3.4E-05 33.2 -2.9 24 222-245 38-61 (73)
271 1tf6_A Protein (transcription 43.4 10 0.00036 33.4 2.1 24 222-245 133-158 (190)
272 1tf6_A Protein (transcription 40.7 12 0.00042 33.0 2.1 24 222-245 103-128 (190)
273 2djr_A Zinc finger BED domain- 39.7 11 0.00039 30.2 1.6 30 224-254 29-65 (76)
274 3sp4_A Aprataxin-like protein; 38.7 14 0.00047 35.0 2.3 25 221-245 167-192 (204)
275 3ax1_A Serrate RNA effector mo 37.5 21 0.00071 36.6 3.5 39 223-262 304-344 (358)
276 2jsp_A Transcriptional regulat 35.6 13 0.00045 30.7 1.4 22 221-245 19-40 (87)
277 2elu_A Zinc finger protein 406 30.6 25 0.00085 24.0 1.8 21 224-244 10-30 (37)
278 2ct5_A Zinc finger BED domain 30.2 23 0.00077 28.2 1.9 32 223-255 29-63 (73)
279 1vd4_A Transcription initiatio 29.1 13 0.00044 27.1 0.2 18 222-239 13-30 (62)
280 3vk6_A E3 ubiquitin-protein li 25.4 34 0.0012 29.0 2.2 26 221-246 56-84 (101)
281 3vxv_A Methyl-CPG-binding doma 21.5 34 0.0012 26.8 1.4 25 221-245 26-50 (69)
No 1
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1.7e-19 Score=150.56 Aligned_cols=77 Identities=35% Similarity=0.592 Sum_probs=69.4
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhhcc
Q 011313 3 SEKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQILFS 82 (489)
Q Consensus 3 s~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l~~ 82 (489)
....+||+||||++.|+..+||+|||+|+++||||+++ ...+...|+.|+.||+||+||..|..||..+..++.+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-----~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 78 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-----SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTS 78 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-----SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTC
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-----ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccc
Confidence 45679999999999999999999999999999999982 3568999999999999999999999999999877664
Q ss_pred CC
Q 011313 83 DL 84 (489)
Q Consensus 83 ~~ 84 (489)
+.
T Consensus 79 ~~ 80 (88)
T 2ctr_A 79 GK 80 (88)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 2
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=1.4e-19 Score=148.53 Aligned_cols=75 Identities=41% Similarity=0.619 Sum_probs=67.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhh
Q 011313 3 SEKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQIL 80 (489)
Q Consensus 3 s~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l 80 (489)
+...+||+||||+++|+..+||+|||+|+++||||++ ++ ....+...|+.|+.||+||+||.+|..||.++..++
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~--~~-~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKN--PE-NKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTC--ST-THHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC--CC-cHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 4568999999999999999999999999999999998 33 345789999999999999999999999999876543
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.78 E-value=1.5e-19 Score=146.95 Aligned_cols=71 Identities=38% Similarity=0.672 Sum_probs=65.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhhc
Q 011313 6 RCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQILF 81 (489)
Q Consensus 6 ~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l~ 81 (489)
.+||+||||+++||..+||+|||+|+++||||+++. ..+...|+.|+.||+||+||..|..||.++..++.
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-----~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-----PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-----TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 789999999999999999999999999999999832 35789999999999999999999999999877654
No 4
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.78 E-value=5.5e-20 Score=157.75 Aligned_cols=74 Identities=45% Similarity=0.704 Sum_probs=66.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhhcc
Q 011313 5 KRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQILFS 82 (489)
Q Consensus 5 ~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l~~ 82 (489)
..+||+||||+++||..+||+|||+|+++||||+++ + .+.+...|+.|++||+||+||.+|..||..+...+..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~--~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQ--G--DKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCT--T--TCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC--C--cHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 478999999999999999999999999999999983 2 2357899999999999999999999999999876654
No 5
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.4e-19 Score=150.46 Aligned_cols=77 Identities=40% Similarity=0.627 Sum_probs=68.5
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhhcc
Q 011313 3 SEKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQILFS 82 (489)
Q Consensus 3 s~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l~~ 82 (489)
+...+||+||||+++|+..+||+|||+|+++||||+++ + ....+...|+.|++||+||+||.+|..||..+...+..
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~-~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNP--D-NKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCS--S-CSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC--c-cHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 46789999999999999999999999999999999983 2 34578999999999999999999999999988765543
No 6
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=2e-19 Score=156.08 Aligned_cols=96 Identities=36% Similarity=0.557 Sum_probs=76.3
Q ss_pred CCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhhc
Q 011313 2 ASEKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQILF 81 (489)
Q Consensus 2 ~s~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l~ 81 (489)
+....+||+||||+++|+..+||+|||+|+++||||++ ++ .+.+...|+.|+.||+||+||.+|..||.++..++.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~--~~--~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKN--PD--NPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTS--TT--CHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCC--CC--cHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 44678999999999999999999999999999999998 32 356899999999999999999999999999876554
Q ss_pred cCCCCCCCCCCCCCcccccCCCCCC
Q 011313 82 SDLNSASNCGPVPNLYSYFSNTAFS 106 (489)
Q Consensus 82 ~~~~~~~~~~~~~dlf~ff~~~~f~ 106 (489)
.... ....++..||...+++
T Consensus 89 ~~~~-----~~~~~~~~~~~~~~~~ 108 (109)
T 2ctw_A 89 VAEQ-----FGEENVNTYFVSGPSS 108 (109)
T ss_dssp HHHH-----TCTTHHHHHHHSSSCC
T ss_pred cccc-----cCCcchHHHhhcCCCC
Confidence 2211 1123555566554444
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=4.2e-19 Score=144.53 Aligned_cols=70 Identities=37% Similarity=0.651 Sum_probs=64.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhh
Q 011313 4 EKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQ 78 (489)
Q Consensus 4 ~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~ 78 (489)
...+||+||||+++|+..+||+|||+|+++||||++. ...+...|+.|+.||+||+||.+|..||..+..
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-----~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 74 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-----APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG 74 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-----SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-----CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 4678999999999999999999999999999999982 246889999999999999999999999998754
No 8
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.76 E-value=4.8e-19 Score=151.40 Aligned_cols=74 Identities=38% Similarity=0.611 Sum_probs=64.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhhcc
Q 011313 6 RCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQILFS 82 (489)
Q Consensus 6 ~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l~~ 82 (489)
.|||+||||+++|+..+||+|||+|+++||||++ ++ ....+...|+.|++||+||+||.+|..||..+..++.+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~--~~-~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKN--PD-NKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTC--CS-CCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC--Cc-cHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 6899999999999999999999999999999998 32 34568999999999999999999999999998766544
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.76 E-value=5.3e-19 Score=147.48 Aligned_cols=70 Identities=37% Similarity=0.566 Sum_probs=64.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhh
Q 011313 3 SEKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRS 77 (489)
Q Consensus 3 s~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~ 77 (489)
....+||+||||++.|+..+||+|||+|+++||||++.. ..+...|+.|++||+||+||..|..||.++.
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-----~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 83 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-----PGAEDRFIQISKAYEILSNEEKRTNYDHYGS 83 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-----TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-----hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence 467899999999999999999999999999999999932 3578999999999999999999999999875
No 10
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=6.2e-19 Score=143.74 Aligned_cols=72 Identities=36% Similarity=0.577 Sum_probs=64.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhh
Q 011313 3 SEKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQ 78 (489)
Q Consensus 3 s~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~ 78 (489)
....+||+||||+++|+..+||+|||+|+++||||+++ + .+.+...|+.|+.||+||+||.+|..||.++..
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~--~--~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNK--D--DPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCS--S--CTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--C--CHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 35679999999999999999999999999999999983 2 245889999999999999999999999988653
No 11
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.7e-18 Score=145.72 Aligned_cols=72 Identities=36% Similarity=0.671 Sum_probs=65.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhhccC
Q 011313 5 KRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQILFSD 83 (489)
Q Consensus 5 ~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l~~~ 83 (489)
..+||+||||+++|+..+||+|||+|+++||||++ ++ ....|+.|++||+||+||.+|..||.++...+...
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~--~~-----~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKP--TG-----DTEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTST--TC-----CHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC--CC-----hHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 47899999999999999999999999999999998 33 14599999999999999999999999998777643
No 12
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.74 E-value=2.5e-18 Score=138.40 Aligned_cols=67 Identities=40% Similarity=0.744 Sum_probs=60.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhh
Q 011313 4 EKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRS 77 (489)
Q Consensus 4 ~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~ 77 (489)
...+||+||||+++|+..+||+|||+|+++||||++ ++ +...|+.|+.||+||+||.+|..||.+|.
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~--~~-----~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKN--PD-----GAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTC--TT-----CHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC--cC-----HHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 457899999999999999999999999999999998 33 25789999999999999999999999864
No 13
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.1e-18 Score=150.19 Aligned_cols=73 Identities=32% Similarity=0.502 Sum_probs=65.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhh
Q 011313 4 EKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQIL 80 (489)
Q Consensus 4 ~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l 80 (489)
...|||+||||+++|+..+||+|||+|+++||||+++ + ...+...|+.|+.||+||+||.+|..||.++..++
T Consensus 18 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~--~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 18 DTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHP--E--NPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCT--T--CSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--C--cHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 4589999999999999999999999999999999993 2 23589999999999999999999999999987543
No 14
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.73 E-value=1.6e-18 Score=145.64 Aligned_cols=74 Identities=28% Similarity=0.479 Sum_probs=64.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCC--CChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhh
Q 011313 4 EKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSG--LSQAEATAQFQELVHAYEVLSDPKERAWYDSHRS 77 (489)
Q Consensus 4 ~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~--~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~ 77 (489)
...+||+||||+++|+..+||+|||+|+++||||+++... .....+...|+.|++||+||+||.+|..||..+.
T Consensus 14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4578999999999999999999999999999999983211 0125689999999999999999999999998764
No 15
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=3.8e-18 Score=145.39 Aligned_cols=69 Identities=33% Similarity=0.579 Sum_probs=62.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhh
Q 011313 4 EKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHR 76 (489)
Q Consensus 4 ~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~ 76 (489)
...+||+||||+++|+..+||+|||+|+++||||++. + ...+...|+.|++||+||+||.+|..||..+
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~--~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNS--G--SAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCS--S--CSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--C--CHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 4678999999999999999999999999999999983 2 3468899999999999999999999999854
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.69 E-value=1e-17 Score=144.79 Aligned_cols=74 Identities=27% Similarity=0.443 Sum_probs=65.6
Q ss_pred CCCCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhh
Q 011313 3 SEKRCLYEVLGLRKEC-TTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRS 77 (489)
Q Consensus 3 s~~~dyYevLGV~~~A-s~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~ 77 (489)
....+||+||||+++| +..+||+|||+|+++||||+++. ....+.+...|+.|++||+||+||.+|+.||..+.
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~-~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKN-KEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCS-HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 4568999999999999 99999999999999999999832 11245789999999999999999999999999864
No 17
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.67 E-value=2.7e-17 Score=154.71 Aligned_cols=73 Identities=40% Similarity=0.583 Sum_probs=65.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhhcc
Q 011313 6 RCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQILFS 82 (489)
Q Consensus 6 ~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l~~ 82 (489)
.|||+||||+++|+..+||+|||+|+++||||+++ + ...+...|+.|++||+||+||.+|+.||.++..++..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~--~--~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNP--N--NPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCT--T--CTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--C--ChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 68999999999999999999999999999999983 2 2358899999999999999999999999998766543
No 18
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.66 E-value=4.8e-17 Score=148.77 Aligned_cols=75 Identities=27% Similarity=0.490 Sum_probs=65.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCC--ChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhh
Q 011313 4 EKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGL--SQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQ 78 (489)
Q Consensus 4 ~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~--~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~ 78 (489)
...|||+||||+++|+..+||+|||+|+++||||+++.++. ....|...|+.|++||+||+||.+|+.||..+..
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 46789999999999999999999999999999999954321 1235789999999999999999999999987754
No 19
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=6.2e-17 Score=135.75 Aligned_cols=62 Identities=29% Similarity=0.476 Sum_probs=56.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhh
Q 011313 5 KRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAW 71 (489)
Q Consensus 5 ~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~ 71 (489)
..|||+||||+++|+..+||+|||+|+++||||+++. ..+...|+.|++||+||+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-----~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-----PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-----TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-----ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4789999999999999999999999999999999932 3578899999999999999998864
No 20
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.64 E-value=1.2e-16 Score=149.41 Aligned_cols=75 Identities=25% Similarity=0.360 Sum_probs=62.3
Q ss_pred CCCCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCcCCCCCC-hHHHHHHHHHHHHHHHHhcCchhhhhhhhhhh
Q 011313 3 SEKRCLYEVLGLRKECT--TDEIRSAYKKLALQRHPDKLVQSGLS-QAEATAQFQELVHAYEVLSDPKERAWYDSHRS 77 (489)
Q Consensus 3 s~~~dyYevLGV~~~As--~~eIKkAYRklalk~HPDKn~~~~~~-~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~ 77 (489)
|+..|||+||||+++++ ..+||+|||+|+++||||+++..+.. ...|...|..|+.||+||+||.+|+.||..+.
T Consensus 1 s~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 1 SNAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp ---CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 46789999999999998 99999999999999999998432211 11378999999999999999999999998753
No 21
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.61 E-value=5e-17 Score=165.89 Aligned_cols=68 Identities=35% Similarity=0.588 Sum_probs=0.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhh
Q 011313 5 KRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRS 77 (489)
Q Consensus 5 ~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~ 77 (489)
..|||+||||+++||.++||+|||+||++||||+++ ...|.+.|++|++||+||+||.+|+.||.++.
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-----~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 94 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-----ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ 94 (329)
T ss_dssp -------------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-----ChHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence 479999999999999999999999999999999982 23688999999999999999999999998743
No 22
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.60 E-value=4.8e-16 Score=145.06 Aligned_cols=71 Identities=25% Similarity=0.348 Sum_probs=61.6
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCcCCCCC-ChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhh
Q 011313 7 CLYEVLGLRKEC--TTDEIRSAYKKLALQRHPDKLVQSGL-SQAEATAQFQELVHAYEVLSDPKERAWYDSHRS 77 (489)
Q Consensus 7 dyYevLGV~~~A--s~~eIKkAYRklalk~HPDKn~~~~~-~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~ 77 (489)
|||+||||++++ |..+||+|||+|+++||||+++..+. ....|...|..|+.||+||+||.+|+.||..+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 799999999999 99999999999999999999943221 112477899999999999999999999998754
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.58 E-value=1.4e-16 Score=139.56 Aligned_cols=65 Identities=23% Similarity=0.309 Sum_probs=59.0
Q ss_pred CCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhh
Q 011313 5 KRCLYEVLGLRKECTT--DEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRS 77 (489)
Q Consensus 5 ~~dyYevLGV~~~As~--~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~ 77 (489)
..+||+||||++.|+. .+||+|||+|+++||||++ ++ ..+|+.|+.||+||+||.+|+.||.++.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~--~~------~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG--GD------EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTC--CT------TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCC--cc------HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 3579999999999999 9999999999999999998 22 4689999999999999999999998654
No 24
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.57 E-value=5.9e-16 Score=129.79 Aligned_cols=62 Identities=19% Similarity=0.204 Sum_probs=55.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhh
Q 011313 5 KRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKER 69 (489)
Q Consensus 5 ~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R 69 (489)
..++|+||||+++||..+||+|||+|+++||||++ ++ ....|.+.|+.|++||+||+++..|
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~--~~-~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKN--PE-NHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTS--SS-CHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCC--CC-chHHHHHHHHHHHHHHHHHHhhccc
Confidence 45799999999999999999999999999999998 33 3467899999999999999998776
No 25
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.57 E-value=2e-15 Score=144.99 Aligned_cols=73 Identities=19% Similarity=0.288 Sum_probs=62.0
Q ss_pred CCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCcCCCCC-ChHHHHHHHHHHHHHHHHhcCchhhhhhhhhh
Q 011313 4 EKRCLYEVLGLRKE--CTTDEIRSAYKKLALQRHPDKLVQSGL-SQAEATAQFQELVHAYEVLSDPKERAWYDSHR 76 (489)
Q Consensus 4 ~~~dyYevLGV~~~--As~~eIKkAYRklalk~HPDKn~~~~~-~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~ 76 (489)
+..|||+||||++. ++..+||+|||+|+++||||+++..+. ....|...|+.|++||+||+||.+|+.||...
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l 116 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKL 116 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 35789999999986 799999999999999999999943221 12247889999999999999999999999754
No 26
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.56 E-value=1.1e-15 Score=132.44 Aligned_cols=63 Identities=25% Similarity=0.296 Sum_probs=54.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCCh---HHHHHHHHHHHHHHHHhcCch
Q 011313 4 EKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQ---AEATAQFQELVHAYEVLSDPK 67 (489)
Q Consensus 4 ~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~---~~a~~~F~~I~~AYevLsDp~ 67 (489)
+..+||.|||++. ||..+||+|||+|+++|||||++.++.+. ..|...|+.|++||+||+||.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 4579999999996 99999999999999999999995433221 257899999999999999985
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.55 E-value=1.6e-15 Score=142.88 Aligned_cols=66 Identities=23% Similarity=0.415 Sum_probs=58.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhh
Q 011313 6 RCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWY 72 (489)
Q Consensus 6 ~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~Y 72 (489)
.+||+||||++.|+..+||+|||+|+++||||++.... ....|...|+.|++||+||+||.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~-~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQP-YEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCT-THHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcc-hHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 68999999999999999999999999999999994221 1224899999999999999999999987
No 28
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.54 E-value=1.3e-15 Score=125.09 Aligned_cols=60 Identities=27% Similarity=0.317 Sum_probs=54.3
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhh
Q 011313 6 RCLYEVLGLRKE--CTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYD 73 (489)
Q Consensus 6 ~dyYevLGV~~~--As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD 73 (489)
.++|+||||+++ |+..+||+|||+|+++||||++. ..+.|+.|++||+||+||..|..++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~--------~~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG--------SHALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC--------CHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC--------CHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 469999999999 99999999999999999999972 2578999999999999999988743
No 29
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.53 E-value=2.9e-15 Score=126.72 Aligned_cols=58 Identities=24% Similarity=0.430 Sum_probs=51.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCC-hHHHHHHHHHHHHHHHHhcC
Q 011313 6 RCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLS-QAEATAQFQELVHAYEVLSD 65 (489)
Q Consensus 6 ~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~-~~~a~~~F~~I~~AYevLsD 65 (489)
.++|.+|||++.||..+||+|||+||++||||++ ++.. ...|...|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~--~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKA--TGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHH--TTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCC--CCchhHhHHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999 3322 23588999999999999974
No 30
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.52 E-value=1.1e-15 Score=143.14 Aligned_cols=65 Identities=23% Similarity=0.312 Sum_probs=57.1
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhh
Q 011313 5 KRCLYEVLGLRKECT--TDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRS 77 (489)
Q Consensus 5 ~~dyYevLGV~~~As--~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~ 77 (489)
..+||+||||+++|+ .++||+|||+||++||||++ ++ .+.|+.|++||+||+||.+|+.||.+|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~--~~------~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG--GD------EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC-----C------CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCC--CC------HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 368999999999999 59999999999999999998 22 3689999999999999999999999885
No 31
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.51 E-value=4.5e-15 Score=139.76 Aligned_cols=67 Identities=28% Similarity=0.434 Sum_probs=60.0
Q ss_pred CCCCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhh
Q 011313 3 SEKRCLYEVL------GLRK-ECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSH 75 (489)
Q Consensus 3 s~~~dyYevL------GV~~-~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~ 75 (489)
+...|||+|| |+++ +|+..+||+|||+|+++||||++ ++ +...|+.|+.||+||+||.+|+.||..
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~--~~-----a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMA--QQ-----GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSC--CS-----CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCC--cc-----HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 4568999999 4665 99999999999999999999998 32 567899999999999999999999987
Q ss_pred h
Q 011313 76 R 76 (489)
Q Consensus 76 ~ 76 (489)
+
T Consensus 81 l 81 (181)
T 3uo3_A 81 L 81 (181)
T ss_dssp H
T ss_pred H
Confidence 5
No 32
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.48 E-value=5.6e-15 Score=163.96 Aligned_cols=76 Identities=38% Similarity=0.583 Sum_probs=40.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhhhhhhhhccC
Q 011313 4 EKRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDSHRSQILFSD 83 (489)
Q Consensus 4 ~~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~~~~~~l~~~ 83 (489)
...|||+||||+++||..+||+|||+|+++||||++ ++ .+.|...|+.|++||+||+||.+|+.||.+|..++...
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~--~~--~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKN--PN--NPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC---------------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC--CC--ChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 467999999999999999999999999999999998 32 34688999999999999999999999999998766543
No 33
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.1e-14 Score=117.01 Aligned_cols=56 Identities=21% Similarity=0.328 Sum_probs=50.4
Q ss_pred CCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhh
Q 011313 6 RCLYEVLGLRK-ECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKER 69 (489)
Q Consensus 6 ~dyYevLGV~~-~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R 69 (489)
.++|+||||++ +||..+||+|||+|+++||||++ + ....|+.|++||+||+++..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g-----~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---G-----SPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---C-----CHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---C-----CHHHHHHHHHHHHHHhhhhhc
Confidence 57999999999 79999999999999999999996 2 135999999999999998766
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.86 E-value=1.5e-09 Score=108.30 Aligned_cols=69 Identities=41% Similarity=0.684 Sum_probs=56.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcCchhhhhhhh
Q 011313 5 KRCLYEVLGLRKECTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSDPKERAWYDS 74 (489)
Q Consensus 5 ~~dyYevLGV~~~As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsDp~~R~~YD~ 74 (489)
..+||.+||+.+.++..+|+++|+++++++|||+.+.+. ....+...|..|.+||+||+||.+|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~-~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEE-EKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHH-HHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 358999999999999999999999999999999983210 125689999999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.43 E-value=1.9e-07 Score=73.96 Aligned_cols=51 Identities=16% Similarity=0.081 Sum_probs=44.6
Q ss_pred CcccccCCCCC---CCHHHHHHHHHHHHHHhCCCCcCCCCCChHHHHHHHHHHHHHHHHhcC
Q 011313 7 CLYEVLGLRKE---CTTDEIRSAYKKLALQRHPDKLVQSGLSQAEATAQFQELVHAYEVLSD 65 (489)
Q Consensus 7 dyYevLGV~~~---As~~eIKkAYRklalk~HPDKn~~~~~~~~~a~~~F~~I~~AYevLsD 65 (489)
.-|.||||++. ++.++|+++||+|...+|||+.. ....+..|+.|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG--------S~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG--------SFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC--------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC--------CHHHHHHHHHHHHHHHH
Confidence 35789999999 99999999999999999999972 25678899999999863
No 36
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=98.14 E-value=8.6e-07 Score=78.60 Aligned_cols=35 Identities=26% Similarity=0.528 Sum_probs=33.2
Q ss_pred CcccccccccccCChHHHHHhhhhHHHHHHHHHHH
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQSKKHKEKVADLR 256 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~SkkHk~~~~~l~ 256 (489)
..|||++|+|.|.+..+|..|++||+|+++|..|+
T Consensus 49 kpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk~l~ 83 (124)
T 1zr9_A 49 GLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQLS 83 (124)
T ss_dssp GCSEETTTTEECSSHHHHHHHTTCHHHHHHHHHHT
T ss_pred cceEcccCcchhCCHHHHHHHHhhhhhhHHHHHhc
Confidence 57999999999999999999999999999999876
No 37
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=97.55 E-value=3.2e-05 Score=68.33 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=33.2
Q ss_pred cCcccccccccccCChHHHHHhhhhHHHHHHHHHHH
Q 011313 221 RSEFYCVLCGKKFKSEKQWTNHEQSKKHKEKVADLR 256 (489)
Q Consensus 221 ~~~~~C~~C~K~Fks~~~~~nH~~SkkHk~~~~~l~ 256 (489)
...|||.+|++.|.|..++..|.++|+|+++|.+++
T Consensus 91 ~~~~~C~~C~~~f~s~~~~~~H~~gk~H~~~~~~~~ 126 (127)
T 1zu1_A 91 DRSKCCPVCNMTFSSPVVAESHYIGKTHIKNLRLRE 126 (127)
T ss_dssp CTTTEETTTTEECSSHHHHHHHHTSHHHHHHHHHHH
T ss_pred CCCeEcCCCCCEeCCHHHHHHHHCCHHHHHHHHHhc
Confidence 457899999999999999999999999999998764
No 38
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces cerevisiae}
Probab=97.41 E-value=2.4e-05 Score=81.70 Aligned_cols=69 Identities=17% Similarity=0.305 Sum_probs=57.5
Q ss_pred CcccccccccccCChHHHHHhhhhHHHHHHHHHHHHHhhhhhhhhhhcCCCchhhHHHhHHhhhccchhhhhhcCCCCCC
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQSKKHKEKVADLRESFVDEDEVMADFGELDGEVEELGERFKDNVGVEEREIGSGVGGL 301 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~SkkHk~~~~~l~~~~~~e~~~~~~~~~~e~~~~~l~~~l~~~l~~~~~e~~k~~~~~ 301 (489)
..+||.+|+|.|++.+.|.+|+.+|||+++++..+. ..+.+..+..|++.|...+..++..+++ -+.+
T Consensus 291 ~~l~C~~c~K~Fs~~~v~~~hL~GKkh~K~~~~~k~-----------iA~~E~~I~~l~~~L~~~~~~Tk~nVER-Kqa~ 358 (402)
T 4dgw_A 291 KGIYCPFCSRWFKTSSVFESHLVGKIHKKNESKRRN-----------FVYSEYKLHRYLKYLNDEFSRTRSFVER-KLAF 358 (402)
T ss_dssp TEECBTTTTBCBSSHHHHHTTSSSHHHHHHHHHSHH-----------HHHHHHHHHHHHHHTHHHHHHHHHHHHH-HHTC
T ss_pred cCeeehhhhhhhccccccHHHhcccccchhHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhc
Confidence 468999999999999999999999999998766533 2245667888999999999999999999 4555
Q ss_pred C
Q 011313 302 S 302 (489)
Q Consensus 302 s 302 (489)
+
T Consensus 359 T 359 (402)
T 4dgw_A 359 T 359 (402)
T ss_dssp C
T ss_pred c
Confidence 6
No 39
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=96.74 E-value=0.00095 Score=58.87 Aligned_cols=37 Identities=35% Similarity=0.426 Sum_probs=33.2
Q ss_pred cCcccccccccccCChHHHHHhhhhHHHHHHHHHHHH
Q 011313 221 RSEFYCVLCGKKFKSEKQWTNHEQSKKHKEKVADLRE 257 (489)
Q Consensus 221 ~~~~~C~~C~K~Fks~~~~~nH~~SkkHk~~~~~l~~ 257 (489)
...+||.+|+..|.|..++..|.+|++|+.+|..+..
T Consensus 30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~ 66 (127)
T 1zu1_A 30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMA 66 (127)
T ss_dssp BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhc
Confidence 3468999999999999999999999999999986654
No 40
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=96.61 E-value=0.0018 Score=52.71 Aligned_cols=39 Identities=31% Similarity=0.599 Sum_probs=32.6
Q ss_pred ccccccccccc--CChHHHHHhhhhHHHHHHHHHHHHHhhh
Q 011313 223 EFYCVLCGKKF--KSEKQWTNHEQSKKHKEKVADLRESFVD 261 (489)
Q Consensus 223 ~~~C~~C~K~F--ks~~~~~nH~~SkkHk~~~~~l~~~~~~ 261 (489)
-|||..|+..| -|....+.|+++++|+.+++..=+.+..
T Consensus 3 kYyCdYCd~~lt~Ds~s~Rk~H~~G~kH~~nv~~yy~~~~~ 43 (77)
T 3cw1_L 3 KFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYCKWME 43 (77)
T ss_pred CcccccCCceecCCCHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 47999999999 3466689999999999999987666654
No 41
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=95.20 E-value=0.01 Score=62.13 Aligned_cols=37 Identities=24% Similarity=0.479 Sum_probs=33.6
Q ss_pred ccccccccc------ccCChHHHHHhhhhHHHHHHHHHHHHHh
Q 011313 223 EFYCVLCGK------KFKSEKQWTNHEQSKKHKEKVADLRESF 259 (489)
Q Consensus 223 ~~~C~~C~K------~Fks~~~~~nH~~SkkHk~~~~~l~~~~ 259 (489)
-++|.+|++ ++..+.+|..|++|++|+.+|+..++.-
T Consensus 360 ~~~Ce~C~~~~~~~~~~~ge~~W~~H~ksr~Hk~~~~~~~k~~ 402 (409)
T 3eph_A 360 HYTCNVCRNADGKNVVAIGEKYWKIHLGSRRHKSNLKRNTRQA 402 (409)
T ss_dssp EEEEEEEECTTSCEEEEESHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred ceeCCCCCCCCCCcceEEcHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 468999999 8999999999999999999999887654
No 42
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=93.92 E-value=0.032 Score=33.58 Aligned_cols=22 Identities=23% Similarity=0.676 Sum_probs=20.2
Q ss_pred ccccccccccCChHHHHHhhhh
Q 011313 224 FYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 224 ~~C~~C~K~Fks~~~~~nH~~S 245 (489)
|.|..|++.|.+...|..|.++
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~ 23 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRV 23 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGG
T ss_pred ccCCCCCCcCCCHHHHHHHHHH
Confidence 6799999999999999999865
No 43
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=93.39 E-value=0.035 Score=33.79 Aligned_cols=23 Identities=30% Similarity=0.749 Sum_probs=20.8
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHTT
T ss_pred CccCCCCCcccCCHHHHHHHHHh
Confidence 47899999999999999999864
No 44
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=93.37 E-value=0.043 Score=33.35 Aligned_cols=23 Identities=26% Similarity=0.687 Sum_probs=20.9
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 47899999999999999999865
No 45
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=93.36 E-value=0.036 Score=33.62 Aligned_cols=23 Identities=26% Similarity=0.553 Sum_probs=20.7
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHHH
Confidence 57899999999999999999863
No 46
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=92.83 E-value=0.045 Score=33.41 Aligned_cols=23 Identities=22% Similarity=0.405 Sum_probs=20.8
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.....|..|.++
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMRG 25 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHTT
T ss_pred CcCCCCCCcccCCHHHHHHHHHh
Confidence 47899999999999999999864
No 47
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=92.50 E-value=0.05 Score=33.16 Aligned_cols=23 Identities=30% Similarity=0.499 Sum_probs=20.8
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 2 KFACPECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp CEECSSSSCEESCSHHHHHHHTG
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 47899999999999999999875
No 48
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=92.43 E-value=0.058 Score=32.81 Aligned_cols=23 Identities=22% Similarity=0.615 Sum_probs=20.7
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 57899999999999999999864
No 49
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=92.42 E-value=0.064 Score=34.58 Aligned_cols=23 Identities=26% Similarity=0.563 Sum_probs=20.7
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|+|.|.+...|..|+++
T Consensus 2 p~~C~~C~k~F~~~~~L~~H~~~ 24 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKHITL 24 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred cccCCCCCchhCCHHHHHHHHHH
Confidence 47899999999999999999864
No 50
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=92.38 E-value=0.06 Score=32.58 Aligned_cols=23 Identities=26% Similarity=0.579 Sum_probs=20.8
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHH
Confidence 47899999999999999999864
No 51
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=92.38 E-value=0.071 Score=34.70 Aligned_cols=24 Identities=21% Similarity=0.534 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 10 k~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 10 KPFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CCccCCCCCcccCcHHHHHHHHHH
Confidence 468999999999999999999764
No 52
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=91.51 E-value=0.025 Score=34.03 Aligned_cols=23 Identities=35% Similarity=0.749 Sum_probs=20.6
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIRH 24 (26)
Confidence 47899999999999999999864
No 53
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=92.26 E-value=0.06 Score=34.41 Aligned_cols=24 Identities=38% Similarity=0.648 Sum_probs=21.3
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 6 k~~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 6 SGYVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCeECCCCcchhCCHHHHHHHHHH
Confidence 358999999999999999999764
No 54
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.18 E-value=0.075 Score=34.25 Aligned_cols=24 Identities=38% Similarity=0.724 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 8 ~~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elr_A 8 KTHLCDMCGKKFKSKGTLKSHKLL 31 (36)
T ss_dssp SSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCeecCcCCCCcCchHHHHHHHHH
Confidence 458899999999999999999864
No 55
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.11 E-value=0.065 Score=34.75 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 8 KPFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp CSEECSSSSCEESCHHHHHHHHHH
T ss_pred CCccCCCCCchhCCHHHHHHHHHH
Confidence 468999999999999999999864
No 56
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=92.01 E-value=0.071 Score=32.40 Aligned_cols=23 Identities=13% Similarity=0.405 Sum_probs=20.6
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTHIKT 24 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHH
Confidence 47899999999999999999864
No 57
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.97 E-value=0.065 Score=34.74 Aligned_cols=24 Identities=29% Similarity=0.555 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.....|..|.++
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 8 LLYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CCEECSSSCCEESSHHHHHHHHTT
T ss_pred CCeECCCCCCccCCHHHHHHHHHH
Confidence 468899999999999999999865
No 58
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.96 E-value=0.068 Score=34.47 Aligned_cols=24 Identities=13% Similarity=0.266 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elt_A 8 KPYKCPQCSYASAIKANLNVHLRK 31 (36)
T ss_dssp CSEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 59
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=91.85 E-value=0.069 Score=32.18 Aligned_cols=23 Identities=30% Similarity=0.507 Sum_probs=20.6
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHLKI 24 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHH
Confidence 46899999999999999999864
No 60
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=91.65 E-value=0.083 Score=33.91 Aligned_cols=24 Identities=21% Similarity=0.528 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 6 k~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 6 RPFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp SCEECSSSCCEESSHHHHHHHHGG
T ss_pred cCeeCCCCCcccCCHHHHHHHHHH
Confidence 358899999999999999999864
No 61
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.61 E-value=0.084 Score=34.34 Aligned_cols=24 Identities=21% Similarity=0.630 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 8 RSYSCPVCEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCCEETTTTEECSSHHHHHHHHHH
T ss_pred CCcCCCCCCCccCCHHHHHHHHHH
Confidence 458899999999999999999864
No 62
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.38 E-value=0.085 Score=34.18 Aligned_cols=24 Identities=29% Similarity=0.512 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 8 KIFTCEYCNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCEECCCCCceeCCHHHHHHHHHH
Confidence 468899999999999999999864
No 63
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=90.51 E-value=0.039 Score=33.83 Aligned_cols=23 Identities=30% Similarity=0.687 Sum_probs=20.5
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVRQ 24 (29)
Confidence 37899999999999999999864
No 64
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=90.28 E-value=0.043 Score=33.63 Aligned_cols=23 Identities=17% Similarity=0.574 Sum_probs=20.8
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRI 25 (30)
Confidence 47899999999999999999864
No 65
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=90.79 E-value=0.1 Score=34.58 Aligned_cols=24 Identities=21% Similarity=0.632 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 5 k~~~C~~C~k~f~~~~~L~~H~~~ 28 (39)
T 1njq_A 5 RSYTCSFCKREFRSAQALGGHMNV 28 (39)
T ss_dssp SSEECTTTCCEESSHHHHHHHHHT
T ss_pred CceECCCCCcccCCHHHHHHHHHH
Confidence 358899999999999999999864
No 66
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=90.73 E-value=0.11 Score=31.87 Aligned_cols=20 Identities=25% Similarity=0.675 Sum_probs=18.7
Q ss_pred cccccccccccCChHHHHHh
Q 011313 223 EFYCVLCGKKFKSEKQWTNH 242 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH 242 (489)
.|.|..|++.|.+...|..|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRH 21 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHH
T ss_pred CcCCcccCcccCChHHHHHH
Confidence 47899999999999999999
No 67
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.71 E-value=0.093 Score=34.20 Aligned_cols=24 Identities=17% Similarity=0.336 Sum_probs=21.3
Q ss_pred CcccccccccccCCh-HHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSE-KQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~-~~~~nH~~S 245 (489)
..|.|..|++.|.+. ..|..|.++
T Consensus 8 k~~~C~~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 8 RAMKCPYCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CCEECSSSSCEECSSCHHHHHHHHH
T ss_pred CCeECCCCChhhccCHHHHHHHHHh
Confidence 458999999999999 999999864
No 68
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.56 E-value=0.13 Score=35.33 Aligned_cols=24 Identities=29% Similarity=0.642 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emg_A 11 NPFICSECGKVFTHKTNLIIHQKI 34 (46)
T ss_dssp CSCBCTTTCCBCSSHHHHHHHHTT
T ss_pred CCEECCccCcccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 69
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.53 E-value=0.12 Score=35.33 Aligned_cols=24 Identities=29% Similarity=0.553 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2epv_A 11 KPYECNECGKAFIWKSLLIVHERT 34 (44)
T ss_dssp CSEECSSSCCEESSHHHHHHHHGG
T ss_pred cCeECCCCCcccCchHHHHHHHhH
Confidence 468999999999999999999864
No 70
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.50 E-value=0.14 Score=34.26 Aligned_cols=24 Identities=17% Similarity=0.583 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~~ 32 (42)
T 2yte_A 9 KPYSCAECKETFSDNNRLVQHQKM 32 (42)
T ss_dssp CSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCeECCCCCCccCCHHHHHHHHHH
Confidence 458899999999999999999764
No 71
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=90.42 E-value=0.14 Score=35.80 Aligned_cols=24 Identities=29% Similarity=0.566 Sum_probs=21.4
Q ss_pred cCcccccccccccCChHHHHHhhh
Q 011313 221 RSEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 221 ~~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
...+||..|+-+|.+...|.+|.+
T Consensus 6 ~~~~~C~~C~IsF~~l~ty~aHKk 29 (36)
T 1fu9_A 6 VMKKYCSTCDISFNYVKTYLAHKQ 29 (36)
T ss_dssp CCCSEETTTTEECSSHHHHHHHHH
T ss_pred cCcCeeccccceehhhHHHhhhhe
Confidence 356899999999999999999964
No 72
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.39 E-value=0.12 Score=34.65 Aligned_cols=24 Identities=21% Similarity=0.643 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 10 k~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2eos_A 10 KPYPCEICGTRFRHLQTLKSHLRI 33 (42)
T ss_dssp CCBCCSSSCCCBSSHHHHHHHTTT
T ss_pred CCEECCCCCCccCCHHHHHHHHHh
Confidence 468999999999999999999864
No 73
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.10 E-value=0.15 Score=34.98 Aligned_cols=24 Identities=25% Similarity=0.576 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2enf_A 11 KPYKCNECGKVFTQNSHLVRHRGI 34 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHHHHHTT
T ss_pred cCeECCCCCcccCCHHHHHHHHHh
Confidence 468999999999999999999864
No 74
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.09 E-value=0.15 Score=34.81 Aligned_cols=24 Identities=29% Similarity=0.599 Sum_probs=21.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep1_A 11 KPYECSDCGKSFIKKSQLHVHQRI 34 (46)
T ss_dssp CSSCCSSSCCCCSSHHHHHHHHGG
T ss_pred CCcCCCCCCchhCCHHHHHHHHHH
Confidence 458999999999999999999875
No 75
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=90.09 E-value=0.14 Score=30.91 Aligned_cols=23 Identities=22% Similarity=0.716 Sum_probs=20.6
Q ss_pred ccccc--ccccccCChHHHHHhhhh
Q 011313 223 EFYCV--LCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~--~C~K~Fks~~~~~nH~~S 245 (489)
.|.|. .|++.|.+...|..|+++
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 36799 999999999999999864
No 76
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.07 E-value=0.15 Score=35.01 Aligned_cols=24 Identities=29% Similarity=0.517 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2en9_A 11 KLFKCNECKKTFTQSSSLTVHQRI 34 (46)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCEECCccCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 77
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.02 E-value=0.14 Score=34.52 Aligned_cols=24 Identities=29% Similarity=0.657 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2en7_A 11 KPYVCNECGKAFRSKSYLIIHTRT 34 (44)
T ss_dssp SSSCCTTTCCCCSSHHHHHHHHTT
T ss_pred cCeECCCCCCccCCHHHHHHHhhh
Confidence 458999999999999999999864
No 78
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.00 E-value=0.16 Score=34.86 Aligned_cols=24 Identities=25% Similarity=0.661 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq2_A 11 KPYQCNECGKAFSQTSKLARHQRV 34 (46)
T ss_dssp CSSSCCSSCCCCSSHHHHHHHGGG
T ss_pred CCeECCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999865
No 79
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=89.90 E-value=0.14 Score=34.23 Aligned_cols=24 Identities=29% Similarity=0.746 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~~ 32 (42)
T 2el5_A 9 NPYECSECGKAFNRKDQLISHQRT 32 (42)
T ss_dssp CSEECSSSCCEESSHHHHHHHHGG
T ss_pred CCccCCCcChhhCCHHHHHHHHHh
Confidence 458899999999999999999864
No 80
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.88 E-value=0.15 Score=35.17 Aligned_cols=24 Identities=25% Similarity=0.710 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eon_A 11 KPYKCQVCGKAFRVSSHLVQHHSV 34 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHHHHTTT
T ss_pred cccCCCCCCcccCcHHHHHHHHHh
Confidence 468899999999999999999865
No 81
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.84 E-value=0.16 Score=34.61 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eou_A 11 TTSECQECGKIFRHSSLLIEHQAL 34 (44)
T ss_dssp CCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHHHHH
Confidence 458999999999999999999764
No 82
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.82 E-value=0.15 Score=35.03 Aligned_cols=24 Identities=25% Similarity=0.606 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emi_A 11 RHYECSECGKAFIQKSTLSMHQRI 34 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHGG
T ss_pred CCCCCCCCCcccCCHHHHHHHHhH
Confidence 458999999999999999999875
No 83
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.75 E-value=0.14 Score=35.04 Aligned_cols=24 Identities=29% Similarity=0.678 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eor_A 11 KPYNCEECGKAFIHDSQLQEHQRI 34 (46)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHH
T ss_pred cCccCCCCCCCcCCHHHHHHHHHh
Confidence 458999999999999999999864
No 84
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.74 E-value=0.14 Score=34.52 Aligned_cols=24 Identities=21% Similarity=0.560 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eof_A 11 KPYECNECQKAFNTKSNLMVHQRT 34 (44)
T ss_dssp CSEECTTTCCEESCHHHHHHHHHH
T ss_pred CCeECCCCCcccCCHhHHHHHHHH
Confidence 458999999999999999999864
No 85
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.73 E-value=0.16 Score=34.96 Aligned_cols=24 Identities=25% Similarity=0.605 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2enh_A 11 KPYECDVCRKAFSHHASLTQHQRV 34 (46)
T ss_dssp SSCBCTTTCCBCSSSHHHHHHGGG
T ss_pred CCcCCCCcCchhCCHHHHHHHHHH
Confidence 468999999999999999999864
No 86
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.73 E-value=0.14 Score=35.10 Aligned_cols=24 Identities=21% Similarity=0.679 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2em3_A 11 KPYECKVCSKAFTQKAHLAQHQKT 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 87
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=89.71 E-value=0.14 Score=35.19 Aligned_cols=24 Identities=33% Similarity=0.697 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emj_A 11 KPFECAECGKSFSISSQLATHQRI 34 (46)
T ss_dssp CSEECSSSSCEESSHHHHHHHHHH
T ss_pred CCEECCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 88
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.70 E-value=0.17 Score=34.55 Aligned_cols=24 Identities=25% Similarity=0.593 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eov_A 11 KPYKCSDCGKSFTWKSRLRIHQKC 34 (46)
T ss_dssp CSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred CCccCCccChhhCCHHHHHHHHHh
Confidence 458999999999999999999754
No 89
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.62 E-value=0.15 Score=34.49 Aligned_cols=24 Identities=29% Similarity=0.740 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eoj_A 11 NPYECCECGKVFSRKDQLVSHQKT 34 (44)
T ss_dssp CSCEETTTTEECSSHHHHHHHHTT
T ss_pred cCeeCCCCCCccCCHHHHHHHHHH
Confidence 458999999999999999999865
No 90
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=89.60 E-value=0.15 Score=34.08 Aligned_cols=24 Identities=29% Similarity=0.695 Sum_probs=21.3
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 10 ~~~~C~~C~k~f~~~~~l~~H~~~ 33 (42)
T 2epc_A 10 TPYLCGQCGKSFTQRGSLAVHQRS 33 (42)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHHhhh
Confidence 458999999999999999999753
No 91
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.56 E-value=0.17 Score=34.86 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eom_A 11 RGHRCSDCGKFFLQASNFIQHRRI 34 (46)
T ss_dssp SSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCcCCCCCCCeeCChHHHHHHHHH
Confidence 468999999999999999999764
No 92
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=89.51 E-value=0.19 Score=31.26 Aligned_cols=23 Identities=30% Similarity=0.882 Sum_probs=20.5
Q ss_pred ccccc--ccccccCChHHHHHhhhh
Q 011313 223 EFYCV--LCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~--~C~K~Fks~~~~~nH~~S 245 (489)
.|.|. .|++.|.+...|..|.++
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHH
Confidence 47797 999999999999999865
No 93
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.50 E-value=0.15 Score=34.01 Aligned_cols=24 Identities=25% Similarity=0.538 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 10 k~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2ytb_A 10 KPYRCDQCGKAFSQKGSLIVHIRV 33 (42)
T ss_dssp CSBCCTTTTCCBSSHHHHHTTGGG
T ss_pred CCeeCCCccchhCCHHHHHHHHHH
Confidence 468999999999999999999864
No 94
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.49 E-value=0.17 Score=34.72 Aligned_cols=24 Identities=21% Similarity=0.466 Sum_probs=21.3
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoh_A 11 KPYECKECRKTFIQIGHLNQHKRV 34 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCcCCCCcCchhCCHHHHHHHHHH
Confidence 458899999999999999999753
No 95
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.45 E-value=0.16 Score=34.71 Aligned_cols=24 Identities=25% Similarity=0.635 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yts_A 11 KPYICNECGKSFIQKSHLNRHRRI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHGGG
T ss_pred cCEECCCCChhhCChHHHHHHHHh
Confidence 468999999999999999999864
No 96
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.44 E-value=0.16 Score=33.86 Aligned_cols=24 Identities=33% Similarity=0.656 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~~ 32 (41)
T 2ept_A 9 RVYECQECGKSFRQKGSLTLHERI 32 (41)
T ss_dssp CCEECSSSCCEESSHHHHHHHGGG
T ss_pred CCeECCCCCCCcCCHHHHHHHHHH
Confidence 458899999999999999999864
No 97
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.43 E-value=0.18 Score=34.64 Aligned_cols=24 Identities=25% Similarity=0.692 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em6_A 11 KCYKCDVCGKEFSQSSHLQTHQRV 34 (46)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHTT
T ss_pred CCeECCCCCcccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 98
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.41 E-value=0.17 Score=34.68 Aligned_cols=24 Identities=25% Similarity=0.584 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2yti_A 11 KPYKCNECGKVFTQNSHLARHRGI 34 (46)
T ss_dssp CTTCCSSSCCCCSSHHHHHHHHTT
T ss_pred cCeECCCCCcccCChhHHHHHhHh
Confidence 458999999999999999999864
No 99
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.38 E-value=0.17 Score=34.37 Aligned_cols=24 Identities=21% Similarity=0.585 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2emb_A 11 KRYECSKCQATFNLRKHLIQHQKT 34 (44)
T ss_dssp SSEECTTTCCEESCHHHHHHHGGG
T ss_pred CCeECCCCCCccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 100
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.35 E-value=0.13 Score=33.78 Aligned_cols=23 Identities=22% Similarity=0.419 Sum_probs=20.4
Q ss_pred CcccccccccccCChHHHHHh-hh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNH-EQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH-~~ 244 (489)
..|.|..|++.|.+...|..| .+
T Consensus 8 k~~~C~~C~k~f~~~~~L~~H~~~ 31 (37)
T 2elm_A 8 HLYYCSQCHYSSITKNCLKRHVIQ 31 (37)
T ss_dssp CEEECSSSSCEEECHHHHHHHHHH
T ss_pred cCeECCCCCcccCCHHHHHHHHHH
Confidence 358899999999999999999 54
No 101
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.35 E-value=0.15 Score=34.84 Aligned_cols=24 Identities=29% Similarity=0.659 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yrj_A 11 KPYRCGECGKAFAQKANLTQHQRI 34 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHTT
T ss_pred CCeECCCCCCccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 102
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.33 E-value=0.15 Score=35.02 Aligned_cols=24 Identities=25% Similarity=0.600 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoz_A 11 KPYSCNVCGKAFVLSAHLNQHLRV 34 (46)
T ss_dssp CSEEETTTTEEESSHHHHHHHHHH
T ss_pred CCeECcccChhhCCHHHHHHHHHH
Confidence 458999999999999999999764
No 103
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.28 E-value=0.19 Score=34.38 Aligned_cols=24 Identities=29% Similarity=0.512 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eop_A 11 KPHECRECGKSFSFNSQLIVHQRI 34 (46)
T ss_dssp CSCBCTTTCCBCSSHHHHHHHHTT
T ss_pred CCeeCCCCCchhCCHHHHHHHHHH
Confidence 468999999999999999999865
No 104
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.26 E-value=0.16 Score=34.90 Aligned_cols=24 Identities=33% Similarity=0.639 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yto_A 11 KPYKCSDCGKAFTRKSGLHIHQQS 34 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCEECcccCCccCCHhHHHHHHHH
Confidence 468999999999999999999864
No 105
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.23 E-value=0.17 Score=34.62 Aligned_cols=24 Identities=29% Similarity=0.631 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|+++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq3_A 11 KPYECNQCGKAFSVRSSLTTHQAI 34 (46)
T ss_dssp CSSEETTTTEECSSHHHHHHHHTT
T ss_pred CCeECCCCChhhCCHHHHHHHHHH
Confidence 458899999999999999999864
No 106
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.22 E-value=0.16 Score=34.71 Aligned_cols=24 Identities=25% Similarity=0.661 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eow_A 11 KPYKCNECGKAFRARSSLAIHQAT 34 (46)
T ss_dssp CCEECTTSCCEESSHHHHHHHHHH
T ss_pred CCeeccccCChhcCHHHHHHHHHH
Confidence 458899999999999999999864
No 107
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.20 E-value=0.16 Score=34.93 Aligned_cols=24 Identities=25% Similarity=0.595 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2ytp_A 11 RHYECSECGKAFARKSTLIMHQRI 34 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHTT
T ss_pred CCeECCcCCcccCCHHHHHHHHHH
Confidence 458899999999999999999875
No 108
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.19 E-value=0.2 Score=34.35 Aligned_cols=24 Identities=29% Similarity=0.740 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yth_A 11 KPFQCEECGKRFTQNSHLHSHQRV 34 (46)
T ss_dssp SSBCCSSSCCCBSSHHHHHHHGGG
T ss_pred cCCCCCCCCcccCCHHHHHHHHHh
Confidence 458999999999999999999865
No 109
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.15 E-value=0.2 Score=34.07 Aligned_cols=24 Identities=25% Similarity=0.631 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~~ 32 (43)
T 2yrm_A 9 GAFFCNECDCRFSEEASLKRHTLQ 32 (43)
T ss_dssp CCBCCSSSCCCBSSHHHHHHHHHH
T ss_pred CCEECCCCCCeeCChHHHHHHHHh
Confidence 458999999999999999999864
No 110
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.14 E-value=0.2 Score=34.48 Aligned_cols=24 Identities=29% Similarity=0.704 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 11 KPYKCMECGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp CSSSBTTTTBCCSSHHHHHHHHHH
T ss_pred CCcCCCCCCchhCCHHHHHHHHHH
Confidence 468899999999999999999865
No 111
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=89.14 E-value=0.19 Score=31.37 Aligned_cols=23 Identities=26% Similarity=0.561 Sum_probs=20.8
Q ss_pred ccccc--ccccccCChHHHHHhhhh
Q 011313 223 EFYCV--LCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~--~C~K~Fks~~~~~nH~~S 245 (489)
.|.|. .|++.|.+...|..|.++
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 47899 899999999999999875
No 112
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.12 E-value=0.17 Score=34.81 Aligned_cols=24 Identities=33% Similarity=0.758 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em4_A 11 RPYECIECGKAFKTKSSLICHRRS 34 (46)
T ss_dssp SSEECSSSCCEESSHHHHHHHHHH
T ss_pred cCcCCCCCCCccCCHHHHHHHHHh
Confidence 458999999999999999999864
No 113
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=89.10 E-value=0.21 Score=34.30 Aligned_cols=24 Identities=25% Similarity=0.639 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|+++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emk_A 11 KPYECKECGKAFSQTTHLIQHQRV 34 (46)
T ss_dssp CSCBCSSSCCBCSCHHHHHHHHHH
T ss_pred CceECCCCCchhCCHHHHHHHHHH
Confidence 458999999999999999999864
No 114
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.09 E-value=0.19 Score=34.47 Aligned_cols=24 Identities=29% Similarity=0.677 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq1_A 11 KPYKCNECGKAFRAHSNLTTHQVI 34 (46)
T ss_dssp CCCCCTTTTCCCSSHHHHHHHHTT
T ss_pred CCeECCcCChhhCCHHHHHHHHHH
Confidence 468999999999999999999864
No 115
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.98 E-value=0.16 Score=34.70 Aligned_cols=24 Identities=29% Similarity=0.746 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (45)
T 2epu_A 11 KPFECTHCGKSFRAKGNLVTHQRI 34 (45)
T ss_dssp CSEEETTTTEEESSHHHHHHHHTT
T ss_pred cCccCCCCCCccCChHHHHHHHHH
Confidence 468899999999999999999864
No 116
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.97 E-value=0.22 Score=34.10 Aligned_cols=24 Identities=25% Similarity=0.584 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2ytn_A 11 KPYKCNECGKVFTQNSHLARHRGI 34 (46)
T ss_dssp SSCBCTTTCCBCSSHHHHHHHGGG
T ss_pred cCeECCCCCCeeCCHHHHHHHhhh
Confidence 468999999999999999999864
No 117
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.97 E-value=0.2 Score=34.34 Aligned_cols=24 Identities=29% Similarity=0.650 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2epz_A 11 KPFDCIDCGKAFSDHIGLNQHRRI 34 (46)
T ss_dssp CSBCCTTTCCCBSSHHHHHHHHTT
T ss_pred CCeECCCCCceeCCHHHHHHHHHH
Confidence 468999999999999999999864
No 118
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.96 E-value=0.17 Score=34.79 Aligned_cols=24 Identities=21% Similarity=0.560 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em5_A 11 KSHQCHECGRGFTLKSHLNQHQRI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHTT
T ss_pred CCeECCcCCCccCCHHHHHHHHHH
Confidence 468999999999999999999865
No 119
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.96 E-value=0.15 Score=35.10 Aligned_cols=24 Identities=38% Similarity=0.610 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoy_A 11 KCFKCNKCEKTFSCSKYLTQHERI 34 (46)
T ss_dssp CCEECSSSCCEESSSHHHHHHHTT
T ss_pred CCEECcCCCCcCCCHHHHHHHHHH
Confidence 458999999999999999999864
No 120
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.96 E-value=0.19 Score=34.55 Aligned_cols=24 Identities=29% Similarity=0.675 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emf_A 11 KHFECTECGKAFTRKSTLSMHQKI 34 (46)
T ss_dssp CCEECSSSCCEESCHHHHHHHGGG
T ss_pred CCeECCCCCchhCCHHHHHHHHHH
Confidence 458899999999999999999875
No 121
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.94 E-value=0.16 Score=33.96 Aligned_cols=24 Identities=21% Similarity=0.490 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 10 k~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2en2_A 10 KPYKCETCGARFVQVAHLRAHVLI 33 (42)
T ss_dssp CSEECTTTCCEESSHHHHHHHTHH
T ss_pred CCEeCCCcChhhCCHHHHHHHHHH
Confidence 468999999999999999999864
No 122
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=88.94 E-value=0.18 Score=34.41 Aligned_cols=24 Identities=29% Similarity=0.581 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2el4_A 11 KPYGCSQCAKTFSLKSQLIVHQRS 34 (46)
T ss_dssp CSEECSSSSCEESSHHHHHHHGGG
T ss_pred CceECCCCCchhCCHHHHHHHHHH
Confidence 458999999999999999999865
No 123
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.93 E-value=0.2 Score=34.29 Aligned_cols=24 Identities=29% Similarity=0.670 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoq_A 11 KPFKCDICGKSFCGRSRLNRHSMV 34 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCcCCCcCCchhCCHHHHHHHHHH
Confidence 468999999999999999999764
No 124
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.84 E-value=0.17 Score=34.63 Aligned_cols=24 Identities=25% Similarity=0.645 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep3_A 11 KPYRCAECGKAFTDRSNLFTHQKI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHTT
T ss_pred CCeECCCCCchhCCHHHHHHHHHH
Confidence 458999999999999999999864
No 125
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.84 E-value=0.18 Score=34.20 Aligned_cols=24 Identities=33% Similarity=0.580 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 9 k~~~C~~C~k~f~~~~~L~~H~~~ 32 (44)
T 2emx_A 9 KPFGCSCCEKAFSSKSYLLVHQQT 32 (44)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCccCCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 126
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.84 E-value=0.18 Score=34.56 Aligned_cols=24 Identities=29% Similarity=0.686 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emy_A 11 NPYECHECGKAFSRKYQLISHQRT 34 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH
T ss_pred cCcCCCCCCcccCcHHHHHHHHHH
Confidence 468999999999999999999865
No 127
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.80 E-value=0.23 Score=34.06 Aligned_cols=24 Identities=21% Similarity=0.534 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2elz_A 11 KPYKCEDCGKGYNRRLNLDMHQRV 34 (46)
T ss_dssp SSCBCSSSCCBCSSHHHHHHHGGG
T ss_pred CCeeCcccCchhCCHHHHHHHHHh
Confidence 468999999999999999999875
No 128
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.79 E-value=0.18 Score=34.44 Aligned_cols=24 Identities=25% Similarity=0.603 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytf_A 11 KPFECSECQKAFNTKSNLIVHQRT 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHT
T ss_pred CCcCCCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 129
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.77 E-value=0.16 Score=34.82 Aligned_cols=24 Identities=29% Similarity=0.495 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 11 KPFQCKECGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp CSEECSSSCCEESSSHHHHHHHHH
T ss_pred CCeeCcccChhhCCHHHHHHHHHH
Confidence 458999999999999999999854
No 130
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=88.75 E-value=0.17 Score=35.61 Aligned_cols=23 Identities=26% Similarity=0.702 Sum_probs=21.0
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
-.|.|..|+|.|.....|..|.+
T Consensus 6 kp~~C~~C~k~F~~~~~L~~H~~ 28 (48)
T 3iuf_A 6 KPYACDICGKRYKNRPGLSYHYA 28 (48)
T ss_dssp SCEECTTTCCEESSHHHHHHHHH
T ss_pred cCEECCCcCcccCCHHHHHHHhh
Confidence 35899999999999999999986
No 131
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=88.74 E-value=0.22 Score=34.08 Aligned_cols=24 Identities=17% Similarity=0.372 Sum_probs=21.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2em0_A 11 KTWKCRECDMCFSQASSLRLHQNV 34 (46)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHGGG
T ss_pred cCeECCCCCcccCCHHHHHHHHHH
Confidence 458999999999999999999875
No 132
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.74 E-value=0.23 Score=33.92 Aligned_cols=24 Identities=29% Similarity=0.571 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq4_A 11 KLYNCKECGKSFSRAPCLLKHERL 34 (46)
T ss_dssp CCCCBTTTTBCCSCHHHHHHHHHH
T ss_pred CCeECCCCCCccCchHHHHHHHHh
Confidence 458999999999999999999754
No 133
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.70 E-value=0.2 Score=34.34 Aligned_cols=24 Identities=25% Similarity=0.697 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eml_A 11 KPYECSVCGKAFSHRQSLSVHQRI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHGG
T ss_pred CCeeCCCcCCccCCHHHHHHHHHH
Confidence 468899999999999999999865
No 134
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.65 E-value=0.21 Score=34.31 Aligned_cols=24 Identities=29% Similarity=0.598 Sum_probs=21.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytt_A 11 KPYQCSECGKSFSGSYRLTQHWIT 34 (46)
T ss_dssp CTTCCSSSCCCCSSHHHHHHHHTH
T ss_pred CCeeCCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999875
No 135
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.59 E-value=0.22 Score=34.19 Aligned_cols=24 Identities=29% Similarity=0.573 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emz_A 11 RPFKCNECGKGFGRRSHLAGHLRL 34 (46)
T ss_dssp CSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 136
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.55 E-value=0.22 Score=34.01 Aligned_cols=24 Identities=29% Similarity=0.685 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoe_A 11 KPYKCNECGKVFTQNSHLANHQRI 34 (46)
T ss_dssp CSSEETTTTEECSSHHHHHHHHGG
T ss_pred CCeECCCcChhhCCHHHHHHHHHH
Confidence 468999999999999999999864
No 137
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.51 E-value=0.17 Score=34.32 Aligned_cols=24 Identities=25% Similarity=0.635 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2yu5_A 11 NPFKCSKCDRVFTQRNYLVQHERT 34 (44)
T ss_dssp CSEECSSSSCEESSSHHHHHHHHH
T ss_pred CCeECCCCCchhCCHHHHHHHhHh
Confidence 458999999999999999999864
No 138
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=88.50 E-value=0.2 Score=34.34 Aligned_cols=24 Identities=29% Similarity=0.682 Sum_probs=21.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ema_A 11 KRYKCNECGKVFSRNSQLSQHQKI 34 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHTG
T ss_pred cCcCCCCCcchhCCHHHHHHHHHh
Confidence 468999999999999999999875
No 139
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.48 E-value=0.21 Score=34.06 Aligned_cols=24 Identities=25% Similarity=0.645 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytr_A 11 KPYKCNECGKAFSQTSKLARHQRI 34 (46)
T ss_dssp CTTCCTTTCCCCSSHHHHHHHHTT
T ss_pred cCcCCCCCCCccCCHHHHHHHHHh
Confidence 458899999999999999999865
No 140
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.39 E-value=0.21 Score=34.13 Aligned_cols=24 Identities=25% Similarity=0.569 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em7_A 11 KPYKCEECGKGFICRRDLYTHHMV 34 (46)
T ss_dssp CSEECSSSCCEESCHHHHHHHGGG
T ss_pred cCccCCCccchhCCHHHHHHHHHH
Confidence 468999999999999999999865
No 141
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.39 E-value=0.2 Score=34.30 Aligned_cols=24 Identities=25% Similarity=0.654 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytj_A 11 KPYICAECGKAFTIRSNLIKHQKI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred cCeECCCCChhhCCHHHHHHHHHH
Confidence 468999999999999999999864
No 142
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.38 E-value=0.2 Score=34.30 Aligned_cols=24 Identities=33% Similarity=0.740 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep2_A 11 KPYECSICGKSFTKKSQLHVHQQI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHT
T ss_pred cCcCCCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 143
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.38 E-value=0.2 Score=34.32 Aligned_cols=24 Identities=25% Similarity=0.744 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2emh_A 11 RPYICTVCGKAFTDRSNLIKHQKI 34 (46)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHH
T ss_pred CCcCCCCCCchhCCHHHHHHHHHh
Confidence 468999999999999999999864
No 144
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.36 E-value=0.24 Score=33.95 Aligned_cols=24 Identities=29% Similarity=0.571 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytq_A 11 KPYGCSECGKAFSSKSYLIIHMRT 34 (46)
T ss_dssp CSCBCSSSCCBCSCHHHHHHHHTT
T ss_pred CCcCCCccChhhCChHHHHHHHHH
Confidence 458999999999999999999865
No 145
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.34 E-value=0.19 Score=34.37 Aligned_cols=24 Identities=25% Similarity=0.627 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|+++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eq0_A 11 KPYKCHECGKVFRRNSHLARHQLI 34 (46)
T ss_dssp CCEECTTTCCEESSHHHHHHHHTT
T ss_pred CCeECCCCCchhCCHHHHHHHHHH
Confidence 468999999999999999999865
No 146
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.32 E-value=0.14 Score=34.78 Aligned_cols=24 Identities=29% Similarity=0.598 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 11 KSYNCNECGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CCEEETTTTEEESSSHHHHTTHHH
T ss_pred CCeECcccCcccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 147
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.30 E-value=0.22 Score=34.03 Aligned_cols=24 Identities=25% Similarity=0.631 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2eme_A 11 KPYVCDYCGKAFGLSAELVRHQRI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHGG
T ss_pred CCeECCCCChhhCCHHHHHHHHHh
Confidence 468999999999999999999864
No 148
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=88.29 E-value=0.21 Score=34.22 Aligned_cols=22 Identities=32% Similarity=0.764 Sum_probs=20.5
Q ss_pred CcccccccccccCChHHHHHhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHE 243 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~ 243 (489)
..|.|..|+|.|.....|..|.
T Consensus 7 kp~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 7 ARFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCCEETTTTEECSCHHHHHHHH
T ss_pred cCeECCCCCCccCCHhHccCcC
Confidence 4689999999999999999997
No 149
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.22 E-value=0.21 Score=34.12 Aligned_cols=24 Identities=25% Similarity=0.527 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emm_A 11 RPHKCNECGKSFIQSAHLIQHQRI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCeeCCCCChhhCCHHHHHHHHHH
Confidence 458999999999999999999864
No 150
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.22 E-value=0.2 Score=34.28 Aligned_cols=24 Identities=25% Similarity=0.639 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ene_A 11 KPYKCNECGKVFRHNSYLSRHQRI 34 (46)
T ss_dssp SSEECSSSCCEESSHHHHHHHHTT
T ss_pred CCeECCCCCchhCChHHHHHHHhh
Confidence 468999999999999999999875
No 151
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=88.22 E-value=0.2 Score=35.89 Aligned_cols=24 Identities=13% Similarity=0.322 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 23 k~~~C~~C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 23 QPATCPICYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 152
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=88.21 E-value=0.22 Score=34.00 Aligned_cols=24 Identities=25% Similarity=0.595 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em9_A 11 KPYNCKECGKSFRWASCLLKHQRV 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHGGG
T ss_pred cCeECCccccccCChHHHHHHHHH
Confidence 468999999999999999999865
No 153
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=88.17 E-value=0.2 Score=34.37 Aligned_cols=24 Identities=33% Similarity=0.659 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ely_A 11 KPFKCVECGKGFSRRSALNVHHKL 34 (46)
T ss_dssp CSBCCSSSCCCBSSTTHHHHHHHH
T ss_pred CCcccCccCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 154
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.12 E-value=0.21 Score=34.25 Aligned_cols=24 Identities=25% Similarity=0.563 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 11 RPYGCNECGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCEEccccCcccCCHHHHHHHHHH
Confidence 458999999999999999999865
No 155
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.11 E-value=0.21 Score=34.15 Aligned_cols=24 Identities=33% Similarity=0.628 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytk_A 11 KPYKCNECGKVFTQNSHLTNHWRI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCEeCCcCCCccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 156
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.07 E-value=0.19 Score=34.34 Aligned_cols=24 Identities=29% Similarity=0.534 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2epw_A 11 KPCKCTECGKAFCWKSQLIMHQRT 34 (46)
T ss_dssp CSEECSSSCCEESSSHHHHHHHHH
T ss_pred CCeeCCCCCCccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 157
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.95 E-value=0.22 Score=34.16 Aligned_cols=24 Identities=29% Similarity=0.639 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em2_A 11 KPFKCKECGKAFRQNIHLASHLRI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCEECCcCCchhCCHHHHHHHHHH
Confidence 468999999999999999999764
No 158
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.87 E-value=0.22 Score=34.10 Aligned_cols=24 Identities=25% Similarity=0.566 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep0_A 11 KPYKCDVCHKSFRYGSSLTVHQRI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHTT
T ss_pred CCeeCcccCcccCChHHHHHHHHH
Confidence 468999999999999999999865
No 159
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.87 E-value=0.26 Score=33.70 Aligned_cols=23 Identities=26% Similarity=0.627 Sum_probs=21.2
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
..|.|..|+|.|.+...|..|.+
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~ 33 (47)
T 2epx_A 11 KPYECIECGKAFIQNTSLIRHWR 33 (47)
T ss_dssp CSBCCSSSCCCBSSHHHHHHHHT
T ss_pred CCEECCccCchhCChHHHHHHhH
Confidence 46899999999999999999987
No 160
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=87.84 E-value=0.24 Score=33.97 Aligned_cols=24 Identities=21% Similarity=0.529 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2el6_A 11 NPYKCSQCEKSFSGKLRLLVHQRM 34 (46)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG
T ss_pred CCeECCCCCcccCCHHHHHHHHHH
Confidence 458999999999999999999875
No 161
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.83 E-value=0.23 Score=34.09 Aligned_cols=24 Identities=29% Similarity=0.648 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2em8_A 11 KPYKCVECGKGYKRRLDLDFHQRV 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCeECcccCchhCCHHHHHHHHHH
Confidence 468999999999999999999865
No 162
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.79 E-value=0.23 Score=33.93 Aligned_cols=24 Identities=29% Similarity=0.588 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2emp_A 11 KPYMCNECGKAFSVYSSLTTHQVI 34 (46)
T ss_dssp CSEECSSSCCEESCHHHHHHHHHH
T ss_pred cCeECCCCCchhCCHHHHHHHHHH
Confidence 458999999999999999999864
No 163
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.78 E-value=0.23 Score=33.98 Aligned_cols=24 Identities=38% Similarity=0.708 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2enc_A 11 KPFKCEECGKGFYTNSQCYSHQRS 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred CCcCCCCCCCcCCChHHHHHHHHH
Confidence 468999999999999999999764
No 164
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=87.74 E-value=0.23 Score=34.54 Aligned_cols=24 Identities=29% Similarity=0.648 Sum_probs=21.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKLS 34 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG
T ss_pred cCeeCCCCCcccCCHHHHHHHHHh
Confidence 468999999999999999999864
No 165
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.67 E-value=0.23 Score=34.01 Aligned_cols=24 Identities=25% Similarity=0.646 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en6_A 11 KPYGCNECGKTFSQKSILSAHQRT 34 (46)
T ss_dssp CCEEETTTTEEESSHHHHHHHHHH
T ss_pred cCeECCCCCcccCchHHHHHHHHH
Confidence 458899999999999999999864
No 166
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.64 E-value=0.23 Score=34.01 Aligned_cols=24 Identities=25% Similarity=0.588 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ysp_A 11 KPYKCEKCGKGYNSKFNLDMHQKV 34 (46)
T ss_dssp CSEEETTTTEEESCHHHHHHHHTT
T ss_pred CCeECCCCCCccCCHHHHHHHHHh
Confidence 468999999999999999999865
No 167
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=87.61 E-value=0.26 Score=33.60 Aligned_cols=24 Identities=29% Similarity=0.737 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.....|..|+++
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~ 32 (45)
T 2epq_A 9 KPYSCPVCGLRFKRKDRMSYHVRS 32 (45)
T ss_dssp CSSEETTTTEECSCHHHHHHHHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 168
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.57 E-value=0.24 Score=33.87 Aligned_cols=24 Identities=25% Similarity=0.654 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytd_A 11 KPYKCSECGKAFHRHTHLNEHRRI 34 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCeeCChHHHHHHHHH
Confidence 458999999999999999999764
No 169
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.50 E-value=0.25 Score=33.81 Aligned_cols=24 Identities=33% Similarity=0.756 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en1_A 11 KPFKCEECGKRFTQNSQLHSHQRV 34 (46)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG
T ss_pred CCeeCCCCCcccCCHHHHHHHHHH
Confidence 458899999999999999999865
No 170
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.47 E-value=0.24 Score=33.82 Aligned_cols=24 Identities=25% Similarity=0.421 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2en8_A 11 KSHTCDECGKNFCYISALRIHQRV 34 (46)
T ss_dssp SSEECTTTCCEESSHHHHHHHHTT
T ss_pred CCeECCCcCcccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 171
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=87.27 E-value=0.29 Score=34.79 Aligned_cols=24 Identities=33% Similarity=0.517 Sum_probs=19.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~ 26 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRT 26 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHH
T ss_pred CCccCCCCcchhCChHHHHHHHHH
Confidence 357899999999999999999864
No 172
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=87.25 E-value=0.24 Score=37.54 Aligned_cols=23 Identities=26% Similarity=0.895 Sum_probs=19.5
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|+|.|.+...|..|+++
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~ 26 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRA 26 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CccCCCCCCEeCCHHHHHHHHHH
Confidence 57899999999999999999764
No 173
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=87.22 E-value=0.24 Score=37.63 Aligned_cols=32 Identities=34% Similarity=0.550 Sum_probs=29.6
Q ss_pred ccccccccccCChHHHHHhhhhHHHHHHHHHH
Q 011313 224 FYCVLCGKKFKSEKQWTNHEQSKKHKEKVADL 255 (489)
Q Consensus 224 ~~C~~C~K~Fks~~~~~nH~~SkkHk~~~~~l 255 (489)
..|..|+..|.....++.|+=|+.|..+|..+
T Consensus 14 ~eC~lC~vkYs~r~slqDHIFs~qHI~~vk~~ 45 (55)
T 2yrk_A 14 PECTLCGVKYSARLSIRDHIFSKQHISKVRET 45 (55)
T ss_dssp SCCTTTTCCCCSSSCHHHHHTSHHHHHHHHHT
T ss_pred ccccccCcccccccchhhhhccHHHHHHHHHH
Confidence 48999999999999999999999999988754
No 174
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.16 E-value=0.26 Score=33.70 Aligned_cols=24 Identities=21% Similarity=0.360 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yso_A 11 KSHQCRECGEIFFQYVSLIEHQVL 34 (46)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCEEccccChhhCCHHHHHHHHHH
Confidence 458999999999999999999764
No 175
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=87.07 E-value=0.25 Score=35.17 Aligned_cols=25 Identities=32% Similarity=0.646 Sum_probs=21.9
Q ss_pred CcccccccccccCChHHHHHhhhhH
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQSK 246 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~Sk 246 (489)
..|.|..|++.|.+...|..|+++.
T Consensus 28 ~~~~C~~C~~~f~~~~~l~~H~~~h 52 (57)
T 1bbo_A 28 RPYHCTYCNFSFKTKGNLTKHMKSK 52 (57)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHSS
T ss_pred CCccCCCCCchhcCHHHHHHHHHHh
Confidence 4588999999999999999998753
No 176
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.91 E-value=0.2 Score=34.25 Aligned_cols=24 Identities=29% Similarity=0.667 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytg_A 11 KPFKCGECGKSYNQRVHLTQHQRV 34 (46)
T ss_dssp CSEECTTTCCEESSSHHHHTTGGG
T ss_pred CCeECCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999864
No 177
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.86 E-value=0.23 Score=34.00 Aligned_cols=24 Identities=25% Similarity=0.630 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~ 34 (46)
T 2yu8_A 11 KPYKCNECGKVFTQNSHLARHRRV 34 (46)
T ss_dssp SSEECSSSCCEESSSHHHHHHTHH
T ss_pred CCeECCcCCchhCCHHHHHHHHHh
Confidence 468999999999999999999864
No 178
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=86.61 E-value=0.33 Score=34.95 Aligned_cols=23 Identities=26% Similarity=0.687 Sum_probs=19.3
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|++.|.+...|..|.++
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS 24 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT
T ss_pred cCcCCCCccccCCHHHHHHHHHH
Confidence 46799999999999999888865
No 179
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=86.57 E-value=0.31 Score=31.87 Aligned_cols=24 Identities=21% Similarity=0.534 Sum_probs=20.9
Q ss_pred Ccccccc--cccccCChHHHHHhhhh
Q 011313 222 SEFYCVL--CGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~--C~K~Fks~~~~~nH~~S 245 (489)
..|.|.+ |+|.|.+...|..|.++
T Consensus 7 k~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 7 KQHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCccCCHHHHHHHHHh
Confidence 4578985 99999999999999864
No 180
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=86.54 E-value=0.34 Score=34.40 Aligned_cols=22 Identities=23% Similarity=0.585 Sum_probs=20.2
Q ss_pred ccccccccccCChHHHHHhhhh
Q 011313 224 FYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 224 ~~C~~C~K~Fks~~~~~nH~~S 245 (489)
|.|..|++.|.+...|..|.++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~ 23 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT 23 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH
T ss_pred CcCCCCcCcCCCHHHHHHHHHh
Confidence 6899999999999999999864
No 181
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=86.21 E-value=0.31 Score=36.92 Aligned_cols=24 Identities=25% Similarity=0.490 Sum_probs=22.1
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
-.|.|..|+|.|.....|..|+++
T Consensus 31 kp~~C~~C~k~F~~~~~L~~H~~~ 54 (60)
T 4gzn_C 31 RPRSCPECGKCFRDQSEVNRHLKV 54 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHGGG
T ss_pred cCeECCCCCCCcCCHHHHHHHhCc
Confidence 468999999999999999999875
No 182
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.18 E-value=0.33 Score=33.47 Aligned_cols=24 Identities=13% Similarity=0.200 Sum_probs=21.1
Q ss_pred Ccccccc--cccccCChHHHHHhhhh
Q 011313 222 SEFYCVL--CGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~--C~K~Fks~~~~~nH~~S 245 (489)
..|.|.. |+|.|.....|..|+++
T Consensus 8 kp~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 8 ILLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CCEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCccCCHHHHHHHHHh
Confidence 4688986 99999999999999864
No 183
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=86.12 E-value=0.057 Score=34.51 Aligned_cols=23 Identities=26% Similarity=0.622 Sum_probs=20.4
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|..|+|.|.+...|..|.++
T Consensus 2 p~~C~~C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 2 AFACPACPKRFMRSDALSKHIKT 24 (32)
T ss_dssp CSSSSSSCTTHHHHHTTSSSTTS
T ss_pred CCCCCCCCcccCCHHHHHHHHHH
Confidence 47899999999999999999864
No 184
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=85.56 E-value=0.34 Score=35.60 Aligned_cols=24 Identities=25% Similarity=0.513 Sum_probs=20.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 39 ~~~~C~~C~k~f~~~~~L~~H~~~ 62 (66)
T 2drp_A 39 KVYPCPFCFKEFTRKDNMTAHVKI 62 (66)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHH
T ss_pred cCeECCCCCCccCCHHHHHHHHHH
Confidence 468899999999999999999865
No 185
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=85.48 E-value=0.42 Score=37.18 Aligned_cols=24 Identities=33% Similarity=0.663 Sum_probs=21.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.....|..|.++
T Consensus 12 kpy~C~~CgK~F~~~s~L~~H~r~ 35 (66)
T 2epp_A 12 GILPCGLCGKVFTDANRLRQHEAQ 35 (66)
T ss_dssp CCCCCTTTCCCCSCHHHHHHHHHH
T ss_pred cCcCCCCCCCccCCHHHHHhhhhh
Confidence 568999999999999999999865
No 186
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=85.22 E-value=0.37 Score=34.26 Aligned_cols=24 Identities=13% Similarity=0.332 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 31 ~~~~C~~C~~~f~~~~~l~~H~~~ 54 (57)
T 3uk3_C 31 KPYKCEFCEYAAAQKTSLRYHLER 54 (57)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHH
T ss_pred CCcCCCCCcchhCCHHHHHHHHHH
Confidence 458999999999999999999864
No 187
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=84.46 E-value=0.42 Score=35.68 Aligned_cols=24 Identities=21% Similarity=0.260 Sum_probs=21.1
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~ 31 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI 31 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG
T ss_pred CCeECCCCCcccCCHHHHHHHHHH
Confidence 468899999999999999999876
No 188
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=84.42 E-value=0.4 Score=36.11 Aligned_cols=24 Identities=29% Similarity=0.711 Sum_probs=20.2
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 41 ~~~~C~~C~~~f~~~~~L~~H~~~ 64 (72)
T 1x6e_A 41 KPYKCLECGKAFSQNSGLINHQRI 64 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHHHHh
Confidence 458899999999999999999754
No 189
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=84.26 E-value=0.53 Score=35.56 Aligned_cols=25 Identities=16% Similarity=0.461 Sum_probs=20.8
Q ss_pred cCcccccccccccCChHHHHHhhhh
Q 011313 221 RSEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 221 ~~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
...|.|..|++.|.+...|..|.++
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~ 39 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTV 39 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHH
T ss_pred CCCeECCCCCceeCCHHHHHHHHHH
Confidence 3568899999999999999999754
No 190
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=83.76 E-value=0.43 Score=35.02 Aligned_cols=24 Identities=13% Similarity=0.519 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~ 32 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVT 32 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHH
T ss_pred cceECCCCcchhCCHHHHHHHHHH
Confidence 468999999999999999999865
No 191
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=83.53 E-value=0.44 Score=35.73 Aligned_cols=24 Identities=25% Similarity=0.641 Sum_probs=18.9
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 48 ~~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 48 KPFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CCEECTTTCCEESCHHHHHHHHTT
T ss_pred CCeECCCCCchhCCHHHHHHHHHh
Confidence 357888888888888888888764
No 192
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=83.49 E-value=0.48 Score=35.66 Aligned_cols=24 Identities=29% Similarity=0.656 Sum_probs=21.9
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 13 k~~~C~~C~k~f~~~~~L~~H~~~ 36 (72)
T 1x6e_A 13 KPYGCVECGKAFSRSSILVQHQRV 36 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHG
T ss_pred CCccCCCCCCccCCHHHHHHHHHh
Confidence 468999999999999999999865
No 193
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=83.41 E-value=0.52 Score=30.62 Aligned_cols=24 Identities=29% Similarity=0.771 Sum_probs=20.7
Q ss_pred Cccccc--ccccccCChHHHHHhhhh
Q 011313 222 SEFYCV--LCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~--~C~K~Fks~~~~~nH~~S 245 (489)
..|.|. .|++.|.+...|..|.++
T Consensus 5 k~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 5 KPFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred cceECCCCCCCcccCCHHHHHHHHHH
Confidence 357899 499999999999999854
No 194
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=83.26 E-value=0.47 Score=35.85 Aligned_cols=24 Identities=21% Similarity=0.654 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 44 ~~~~C~~C~k~f~~~~~L~~H~~~ 67 (74)
T 2lce_A 44 KPYRCNICGAQFNRPANLKTHTRI 67 (74)
T ss_dssp CSEECTTTCCEESCHHHHHHHHHH
T ss_pred CCEECCCCCchhCCHHHHHHHHHh
Confidence 458999999999999999999864
No 195
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.25 E-value=0.48 Score=36.09 Aligned_cols=24 Identities=21% Similarity=0.523 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 6 k~~~C~~C~k~f~~~~~L~~H~~~ 29 (78)
T 2d9h_A 6 SGLQCEICGFTCRQKASLNWHQRK 29 (78)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCeeCCHHHHHHHHHH
Confidence 468899999999999999999854
No 196
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=83.15 E-value=0.47 Score=35.42 Aligned_cols=24 Identities=21% Similarity=0.436 Sum_probs=21.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 36 ~~~~C~~C~~~f~~~~~L~~H~~~ 59 (70)
T 1x5w_A 36 RPFKCNYCSFDTKQPSNLSKHMKK 59 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHHH
T ss_pred CCEeCCCCCCccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 197
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=82.90 E-value=0.5 Score=35.96 Aligned_cols=24 Identities=17% Similarity=0.394 Sum_probs=19.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~ 67 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRK 67 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHH
T ss_pred CccCCCCCCCccCCHHHHHHHHHH
Confidence 357888888888888888888754
No 198
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.15 E-value=0.55 Score=37.88 Aligned_cols=23 Identities=30% Similarity=0.577 Sum_probs=19.2
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.|.|.+|+|.|.+...|..|++.
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~~ 76 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTMA 76 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHHH
T ss_pred CEECCCCCCccCCHHHHHHHHHH
Confidence 47899999999999999888753
No 199
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=81.49 E-value=0.63 Score=37.69 Aligned_cols=24 Identities=25% Similarity=0.512 Sum_probs=20.2
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..+.|..|+|.|.+...|..|+++
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~ 50 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRL 50 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhh
Confidence 456799999999999999999865
No 200
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=81.23 E-value=0.63 Score=35.40 Aligned_cols=24 Identities=17% Similarity=0.457 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|++.
T Consensus 14 k~~~C~~C~k~f~~~~~L~~H~~~ 37 (77)
T 2ct1_A 14 KPYECYICHARFTQSGTMKMHILQ 37 (77)
T ss_dssp CSEECTTTCCEESCHHHHHHHHHH
T ss_pred CCeECCCcCchhCCHHHHHHHHHH
Confidence 468999999999999999999863
No 201
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=81.01 E-value=0.64 Score=35.17 Aligned_cols=24 Identities=25% Similarity=0.631 Sum_probs=20.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 56 ~~~~C~~C~~~f~~~~~l~~H~~~ 79 (82)
T 2kmk_A 56 KPHKCQVCGKAFSQSSNLITHSRK 79 (82)
T ss_dssp CCEECTTTSCEESSHHHHHHHHHH
T ss_pred CCCcCCCcchhhCChHHHHHHHHh
Confidence 468899999999999999999764
No 202
>4f9c_B Protein DBF4 homolog A; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_B* 4f9b_B* 4f9a_B*
Probab=80.84 E-value=0.79 Score=41.27 Aligned_cols=27 Identities=26% Similarity=0.516 Sum_probs=23.2
Q ss_pred ccccccccccCChHHHHHhhhhHHHHHHHH
Q 011313 224 FYCVLCGKKFKSEKQWTNHEQSKKHKEKVA 253 (489)
Q Consensus 224 ~~C~~C~K~Fks~~~~~nH~~SkkHk~~~~ 253 (489)
-||.+|...|.+ |..|+.|.+|+.-+.
T Consensus 88 GyCE~C~~~y~~---l~~H~~s~~Hr~fa~ 114 (144)
T 4f9c_B 88 GYCECCLQKYED---LETHLLSEQHRNFAQ 114 (144)
T ss_dssp CEETTTTEECSC---HHHHHHSHHHHHHHT
T ss_pred CCccchhhhhhh---HHHHcCCHHHHHHHh
Confidence 399999999997 779999999986553
No 203
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=80.82 E-value=0.77 Score=31.64 Aligned_cols=23 Identities=26% Similarity=0.496 Sum_probs=21.1
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
-|.|+.|-+.|.|..+|..|-.+
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEA 27 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHH
T ss_pred ccCCcHHHHHcCCHHHHHHHHHh
Confidence 48999999999999999999854
No 204
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=80.58 E-value=0.81 Score=34.76 Aligned_cols=25 Identities=28% Similarity=0.723 Sum_probs=21.9
Q ss_pred cCcccccccccccCChHHHHHhhhh
Q 011313 221 RSEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 221 ~~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
...|.|..|++.|.+...|..|+++
T Consensus 16 ~~~~~C~~C~~~f~~~~~l~~H~~~ 40 (77)
T 2cot_A 16 RRRYKCDECGKSFSHSSDLSKHRRT 40 (77)
T ss_dssp SCSSBCSSSCCBCSCHHHHHHHHTT
T ss_pred CCCEECCCCCcccCCHHHHHHHHHH
Confidence 3568999999999999999999865
No 205
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=80.38 E-value=0.73 Score=35.62 Aligned_cols=24 Identities=29% Similarity=0.736 Sum_probs=20.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 61 ~~~~C~~C~~~f~~~~~l~~H~~~ 84 (90)
T 1a1h_A 61 KPFACDICGRKFARSDERKRHTKI 84 (90)
T ss_dssp CCEECTTTCCEESSHHHHHHHHGG
T ss_pred CCccCCCCCchhCCHHHHHHHHHH
Confidence 458899999999999999999864
No 206
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=80.34 E-value=0.72 Score=32.91 Aligned_cols=23 Identities=26% Similarity=0.655 Sum_probs=20.9
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
..|.|..|++.|.+...|..|++
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~ 33 (54)
T 2eps_A 11 KPYICQSCGKGFSRPDHLNGHIK 33 (54)
T ss_dssp CCEECSSSCCEESSHHHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHHHH
Confidence 46899999999999999999975
No 207
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=80.26 E-value=0.71 Score=33.12 Aligned_cols=23 Identities=26% Similarity=0.608 Sum_probs=20.7
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
..|.|..|++.|.+...|..|++
T Consensus 29 ~~~~C~~C~~~f~~~~~l~~H~~ 51 (60)
T 2adr_A 29 KPYPCGLCNRAFTRRDLLIRHAQ 51 (60)
T ss_dssp CSEECTTTCCEESSHHHHHHHHT
T ss_pred CCccCCCCCCccCCHHHHHHHHH
Confidence 46899999999999999999964
No 208
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=80.25 E-value=0.69 Score=37.44 Aligned_cols=23 Identities=30% Similarity=0.485 Sum_probs=21.2
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
..|.|..|+|.|.+...|..|++
T Consensus 55 k~~~C~~C~k~F~~~~~L~~H~~ 77 (85)
T 2lv2_A 55 QVFPCKYCPATFYSSPGLTRHIN 77 (85)
T ss_dssp SSEECTTSSCEESSHHHHHHHHH
T ss_pred CccCCCCCCCEeCCHHHHHHhCc
Confidence 46899999999999999999975
No 209
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=80.13 E-value=0.84 Score=35.99 Aligned_cols=24 Identities=21% Similarity=0.564 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 74 ~~~~C~~C~~~f~~~~~l~~H~~~ 97 (100)
T 2ebt_A 74 KPFQCGVCNRSFSRSDHLALHMKR 97 (100)
T ss_dssp CSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred CCeECCCCcCccCCHHHHHHHHHH
Confidence 458999999999999999999864
No 210
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.77 E-value=0.72 Score=35.06 Aligned_cols=23 Identities=30% Similarity=0.733 Sum_probs=20.9
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
..|.|..|++.|.+...|..|++
T Consensus 37 ~~~~C~~C~k~f~~~~~L~~H~~ 59 (78)
T 2d9h_A 37 LRFPCEFCGKRFEKPDSVAAHRS 59 (78)
T ss_dssp CCEECTTTCCEESSHHHHHHHHH
T ss_pred cccCCCCCCchhCCHHHHHHHHH
Confidence 46899999999999999999974
No 211
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=79.56 E-value=0.81 Score=34.75 Aligned_cols=24 Identities=25% Similarity=0.585 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 45 ~~~~C~~C~~~f~~~~~L~~H~~~ 68 (77)
T 2cot_A 45 KPYKCDECGKAFIQRSHLIGHHRV 68 (77)
T ss_dssp CSEECSSSCCEESSHHHHHHHGGG
T ss_pred cCeeCCCCCCccCCHHHHHHHHHH
Confidence 458899999999999999999864
No 212
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=78.71 E-value=0.81 Score=35.89 Aligned_cols=24 Identities=29% Similarity=0.483 Sum_probs=19.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 63 ~~~~C~~C~~~f~~~~~l~~H~~~ 86 (96)
T 2dmd_A 63 RPFKCQICPYASRNSSQLTVHLRS 86 (96)
T ss_dssp CCEECSSSSCEESSHHHHHHHHTT
T ss_pred CCccCCCCCCccCCHHHHHHHHHH
Confidence 357899999999999999888764
No 213
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=78.62 E-value=0.88 Score=34.82 Aligned_cols=24 Identities=29% Similarity=0.731 Sum_probs=19.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~ 69 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADN 69 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHH
T ss_pred cceECCCCCChhCCHHHHHHHHHH
Confidence 357899999999999999988753
No 214
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=78.44 E-value=0.91 Score=34.97 Aligned_cols=24 Identities=21% Similarity=0.520 Sum_probs=20.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 64 ~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 64 RPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCccCCCCCcccCCHHHHHHHHHh
Confidence 457899999999999999999864
No 215
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=78.26 E-value=0.89 Score=35.45 Aligned_cols=22 Identities=27% Similarity=0.705 Sum_probs=13.3
Q ss_pred ccccccccccCChHHHHHhhhh
Q 011313 224 FYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 224 ~~C~~C~K~Fks~~~~~nH~~S 245 (489)
|.|..|++.|.+...|..|.++
T Consensus 4 ~~C~~C~k~f~~~~~L~~H~~~ 25 (88)
T 1llm_C 4 FQCRICMRNFSRSDHLTTHIRT 25 (88)
T ss_dssp EECTTTCCEESCHHHHHHHHHH
T ss_pred CcCCCCCCccCCHHHHHHHHHH
Confidence 5566666666666666666543
No 216
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=78.25 E-value=0.89 Score=34.78 Aligned_cols=24 Identities=21% Similarity=0.522 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 14 k~~~C~~C~~~f~~~~~l~~H~~~ 37 (86)
T 1x6h_A 14 KPYACSHCDKTFRQKQLLDMHFKR 37 (86)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCcCCCCCCccCCHHHHHHHHHH
Confidence 468999999999999999999863
No 217
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=77.91 E-value=0.93 Score=34.23 Aligned_cols=22 Identities=36% Similarity=0.752 Sum_probs=17.1
Q ss_pred ccccccccccCChHHHHHhhhh
Q 011313 224 FYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 224 ~~C~~C~K~Fks~~~~~nH~~S 245 (489)
|.|..|++.|.+...|..|.++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~ 23 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLI 23 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHH
T ss_pred ccCCCCcccccCchhHHHHHHH
Confidence 5688888888888888888754
No 218
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.73 E-value=0.9 Score=36.60 Aligned_cols=24 Identities=17% Similarity=0.264 Sum_probs=21.8
Q ss_pred CcccccccccccC-ChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFK-SEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fk-s~~~~~nH~~S 245 (489)
..|.|..|++.|. +...|..|+++
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~ 47 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEV 47 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHH
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHH
Confidence 5689999999999 99999999864
No 219
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=76.74 E-value=1 Score=36.38 Aligned_cols=24 Identities=25% Similarity=0.629 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 64 ~~~~C~~C~~~f~~~~~l~~H~~~ 87 (110)
T 2csh_A 64 KPYECNICAKRFMWRDSFHRHVTS 87 (110)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHH
T ss_pred CCeeCCCCcchhcCHHHHHHHHHH
Confidence 468999999999999999999865
No 220
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=76.62 E-value=1.2 Score=34.82 Aligned_cols=23 Identities=26% Similarity=0.655 Sum_probs=20.5
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
..|.|..|++.|.+...|..|++
T Consensus 64 ~~~~C~~C~~~f~~~~~L~~H~~ 86 (95)
T 2yt9_A 64 KPYICQSCGKGFSRPDHLNGHIK 86 (95)
T ss_dssp SSBCCSSSCCCBSSHHHHHHHHH
T ss_pred CceECCCccchhCCHHHHHHHHH
Confidence 46889999999999999999975
No 221
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=76.60 E-value=1.3 Score=34.64 Aligned_cols=24 Identities=25% Similarity=0.601 Sum_probs=20.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 7 ~~~~C~~C~~~f~~~~~l~~H~~~ 30 (96)
T 2dmd_A 7 GPHKCEVCGKCFSRKDKLKTHMRC 30 (96)
T ss_dssp CCCCBTTTTBCCCCHHHHHHHGGG
T ss_pred cCeECCCCCCccCCHHHHHHHHHh
Confidence 468899999999999999999864
No 222
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.51 E-value=1.1 Score=35.00 Aligned_cols=22 Identities=32% Similarity=0.404 Sum_probs=20.1
Q ss_pred ccccccccccCChHHHHHhhhh
Q 011313 224 FYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 224 ~~C~~C~K~Fks~~~~~nH~~S 245 (489)
|.|..|++.|.+...|..|+++
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~~ 84 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIRV 84 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHHH
T ss_pred cCCCCCCcccCCHHHHHHHHHh
Confidence 7899999999999999999864
No 223
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.00 E-value=1.3 Score=36.11 Aligned_cols=26 Identities=27% Similarity=0.566 Sum_probs=22.8
Q ss_pred CcccccccccccCChHHHHHhhhhHH
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQSKK 247 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~Skk 247 (489)
..|.|..|++.|.+...|..|++...
T Consensus 79 ~~~~C~~C~k~f~~~~~L~~H~~~hh 104 (115)
T 2dmi_A 79 KVLKCMYCGHSFESLQDLSVHMIKTK 104 (115)
T ss_dssp SSCBCSSSCCBCSSHHHHHHHHHHTT
T ss_pred cceECCCCCCccCCHHHHHHHHHHhC
Confidence 46899999999999999999987543
No 224
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=75.93 E-value=1.2 Score=35.57 Aligned_cols=23 Identities=30% Similarity=0.639 Sum_probs=20.5
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
..|.|..|++.|.+...|..|++
T Consensus 72 ~~~~C~~C~~~f~~~~~L~~H~~ 94 (106)
T 2ee8_A 72 KPFKCQECGKGFCQSRTLAVHKT 94 (106)
T ss_dssp CTTSCSSSCCCCSSHHHHHHHHH
T ss_pred CCeECCCcCCcccCHHHHHHHHH
Confidence 35899999999999999999985
No 225
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=75.85 E-value=1.2 Score=36.15 Aligned_cols=20 Identities=35% Similarity=0.665 Sum_probs=15.7
Q ss_pred cccccccccccCChHHHHHh
Q 011313 223 EFYCVLCGKKFKSEKQWTNH 242 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH 242 (489)
.|.|..|+|.|.+...|..|
T Consensus 62 ~~~C~~Cgk~F~~~~~L~~H 81 (96)
T 2ctd_A 62 MFTCHHCGKQLRSLAGMKYH 81 (96)
T ss_dssp CCCCSSSCCCCSSHHHHHHH
T ss_pred CeECCCCCCeeCCHHHHHHH
Confidence 46788888888888888877
No 226
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.80 E-value=1.2 Score=30.31 Aligned_cols=24 Identities=29% Similarity=0.685 Sum_probs=21.2
Q ss_pred Cccccc--ccccccCChHHHHHhhhh
Q 011313 222 SEFYCV--LCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~--~C~K~Fks~~~~~nH~~S 245 (489)
..|.|. .|++.|.+...|..|.++
T Consensus 11 k~~~C~~~~C~k~f~~~~~L~~H~~~ 36 (48)
T 2ent_A 11 KPFACTWPGCGWRFSRSDELSRHRRS 36 (48)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHTT
T ss_pred CCeECCCCCCCCccCCHHHHHHHHHH
Confidence 458898 899999999999999864
No 227
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=74.75 E-value=1.2 Score=34.26 Aligned_cols=24 Identities=25% Similarity=0.641 Sum_probs=21.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~~ 56 (90)
T 1a1h_A 33 KPFQCRICMRNFSRSDHLTTHIRT 56 (90)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHHH
Confidence 468999999999999999999863
No 228
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=73.96 E-value=1.3 Score=34.53 Aligned_cols=24 Identities=29% Similarity=0.737 Sum_probs=21.0
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~ 57 (95)
T 2yt9_A 34 KPYSCPVCGLRFKRKDRMSYHVRS 57 (95)
T ss_dssp CSEECSSSCCEESCHHHHHHHHHH
T ss_pred CCCcCCCCCCccCCHHHHHHHHHH
Confidence 458899999999999999999854
No 229
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=73.93 E-value=1.4 Score=35.87 Aligned_cols=25 Identities=16% Similarity=0.296 Sum_probs=22.0
Q ss_pred cCccccccccccc-CChHHHHHhhhh
Q 011313 221 RSEFYCVLCGKKF-KSEKQWTNHEQS 245 (489)
Q Consensus 221 ~~~~~C~~C~K~F-ks~~~~~nH~~S 245 (489)
...|.|..|+|.| .+...|..|.+.
T Consensus 32 ~~~~~C~~C~k~F~~~~~~L~~H~~~ 57 (96)
T 2ctd_A 32 KGSVSCPTCQAVGRKTIEGLKKHMEN 57 (96)
T ss_dssp TSCEECTTTCSCEESSHHHHHHHHHH
T ss_pred CCCcCCCCCCCCcccCHHHHHHHHHH
Confidence 3568999999999 999999999864
No 230
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=73.31 E-value=1.4 Score=34.26 Aligned_cols=25 Identities=28% Similarity=0.725 Sum_probs=22.2
Q ss_pred CcccccccccccCChHHHHHhhhhH
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQSK 246 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~Sk 246 (489)
..|.|..|++.|.+...|..|.++.
T Consensus 30 ~~~~C~~C~k~f~~~~~L~~H~~~h 54 (88)
T 1llm_C 30 KPFACDICGRKFARSDERKRHRDIQ 54 (88)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHH
T ss_pred CCccCCCCCCccCCHHHHHHHHHHh
Confidence 4689999999999999999998753
No 231
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=72.83 E-value=1.8 Score=34.59 Aligned_cols=24 Identities=21% Similarity=0.610 Sum_probs=20.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|.+|++.|.+...|..|+++
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~ 67 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYI 67 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGG
T ss_pred CCcCCCCccchhCCHHHHHHHHHH
Confidence 357899999999999999999764
No 232
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=72.76 E-value=1.6 Score=35.27 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=20.5
Q ss_pred cccccccccccCChHHHHHhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
.|.|..|++.|.+...|..|++
T Consensus 69 ~~~C~~C~~~f~~~~~L~~H~~ 90 (107)
T 1wjp_A 69 KLTCLECMRTFKSSFSIWRHQV 90 (107)
T ss_dssp GGEEGGGTEECSSHHHHHHHHH
T ss_pred CccCccccchhCCHHHHHHHHH
Confidence 4899999999999999999986
No 233
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=72.26 E-value=1.9 Score=34.71 Aligned_cols=24 Identities=29% Similarity=0.516 Sum_probs=21.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.+.
T Consensus 15 ~~~~C~~C~~~f~~~~~l~~H~~~ 38 (107)
T 1wjp_A 15 EVYQCRLCNAKLSSLLEQGSHERL 38 (107)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred cCeECCCCCCccCCHHHHHHHHHH
Confidence 468999999999999999999876
No 234
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=71.34 E-value=1.9 Score=35.91 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=19.1
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 99 ~~~~C~~C~k~f~~~~~l~~H~~~ 122 (129)
T 2wbt_A 99 HTKVCPVCKKEFTSTDSALDHVCK 122 (129)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHHHHHH
Confidence 357888888888888888888754
No 235
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.27 E-value=1.7 Score=35.36 Aligned_cols=24 Identities=25% Similarity=0.477 Sum_probs=21.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 18 ~~~~C~~C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 18 SKFRCKDCSAAYDTLVELTVHMNE 41 (115)
T ss_dssp CSEEBSSSSCEESSHHHHHHHHHH
T ss_pred CCEECCccCchhcCHHHHHHHHHH
Confidence 468999999999999999999864
No 236
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=71.21 E-value=1.6 Score=37.87 Aligned_cols=24 Identities=13% Similarity=0.441 Sum_probs=21.3
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
-.|.|..|++.|.+...|..|+++
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~~ 44 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFNI 44 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHHH
Confidence 358899999999999999999864
No 237
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=70.06 E-value=1.1 Score=30.93 Aligned_cols=24 Identities=33% Similarity=0.588 Sum_probs=20.7
Q ss_pred Cccccc--ccccccCChHHHHHhhhh
Q 011313 222 SEFYCV--LCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~--~C~K~Fks~~~~~nH~~S 245 (489)
..|.|. .|+|.|.....|..|.++
T Consensus 17 k~~~C~~~~C~k~F~~~~~L~~H~~~ 42 (47)
T 1ncs_A 17 KTFECLFPGCTKTFKRRYNIRSHIQT 42 (47)
T ss_dssp TEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred CCeECCCCCCCCccCCHHHHHHHHHH
Confidence 458895 799999999999999864
No 238
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=69.79 E-value=1.8 Score=36.00 Aligned_cols=24 Identities=33% Similarity=0.551 Sum_probs=21.8
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|+|.|.+...|..|.++
T Consensus 73 ~~~~C~~C~k~f~~~~~l~~H~~~ 96 (129)
T 2wbt_A 73 SQFVCPLCLMPFSSSVSLKQHIRY 96 (129)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHH
T ss_pred CCeECCCCCcccCCHhHHHHHHHH
Confidence 458999999999999999999875
No 239
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=69.71 E-value=2 Score=31.97 Aligned_cols=25 Identities=20% Similarity=0.510 Sum_probs=21.7
Q ss_pred cCcccccc--cccccCChHHHHHhhhh
Q 011313 221 RSEFYCVL--CGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 221 ~~~~~C~~--C~K~Fks~~~~~nH~~S 245 (489)
...|.|.. |++.|.+...|..|+++
T Consensus 15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~ 41 (72)
T 2epa_A 15 IRSHICSHPGCGKTYFKSSHLKAHTRT 41 (72)
T ss_dssp CCCEECSSTTTCCEESSHHHHHHHHHH
T ss_pred cCceeCCCCCCccccCCHHHHHHHHHh
Confidence 35689999 99999999999999864
No 240
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=69.61 E-value=1.9 Score=35.13 Aligned_cols=24 Identities=25% Similarity=0.535 Sum_probs=20.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~ 88 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVS 88 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCeECCCCCCccCCHHHHHHHHHH
Confidence 457899999999999999999854
No 241
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=69.60 E-value=1.9 Score=34.77 Aligned_cols=24 Identities=29% Similarity=0.556 Sum_probs=21.7
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 24 kpy~C~~C~k~F~~~~~L~~H~~~ 47 (88)
T 1x6f_A 24 STYQCKHCDSKLQSTAELTSHLNI 47 (88)
T ss_dssp SCEECSSSCCEESSHHHHHHHHHH
T ss_pred CCCcCCCCCCEeCCHHHHHHHHHH
Confidence 468899999999999999999865
No 242
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=68.50 E-value=2.5 Score=34.38 Aligned_cols=23 Identities=35% Similarity=0.491 Sum_probs=18.5
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
..|.|..|++.|.+...|..|++
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~ 28 (124)
T 2dlq_A 6 SGVECPTCHKKFLSKYYLKVHNR 28 (124)
T ss_dssp SSCCCTTTCCCCSSHHHHHHHHH
T ss_pred CCCCCCCCCCcCCCHHHHHHHHH
Confidence 45778888888888888888875
No 243
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=68.34 E-value=2.2 Score=32.10 Aligned_cols=24 Identities=33% Similarity=0.667 Sum_probs=21.2
Q ss_pred Ccccccc--cccccCChHHHHHhhhh
Q 011313 222 SEFYCVL--CGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~--C~K~Fks~~~~~nH~~S 245 (489)
..|.|.. |++.|.+...|..|+++
T Consensus 37 ~~~~C~~~~C~k~f~~~~~L~~H~~~ 62 (79)
T 2dlk_A 37 KSFSCPEPACGKSFNFKKHLKEHMKL 62 (79)
T ss_dssp CCEECSCTTTCCEESSHHHHHHHHHH
T ss_pred CCeECCCCCCcCccCCHHHHHHHHHH
Confidence 4688998 99999999999999864
No 244
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=68.27 E-value=2.1 Score=34.72 Aligned_cols=24 Identities=25% Similarity=0.659 Sum_probs=21.1
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 65 KPFQCKTCQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHH
T ss_pred CCccCCccCchhCCHHHHHHHHHH
Confidence 458999999999999999999863
No 245
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.84 E-value=2.6 Score=31.21 Aligned_cols=23 Identities=17% Similarity=0.407 Sum_probs=21.1
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
..+.|.-|++.|.-...|++|.+
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 56789999999999999999986
No 246
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.34 E-value=2 Score=31.74 Aligned_cols=23 Identities=22% Similarity=0.400 Sum_probs=19.6
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|. ...|..|+++
T Consensus 9 ~~~~C~~C~k~f~-~~~L~~H~~~ 31 (66)
T 2eod_A 9 RTQPCTYCTKEFV-FDTIQSHQYQ 31 (66)
T ss_dssp CEEECSSSCCEEE-HHHHHHHHHH
T ss_pred CCeeccccCCccC-HHHHHHHHHH
Confidence 3578999999999 9999999764
No 247
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.26 E-value=1.9 Score=34.77 Aligned_cols=24 Identities=33% Similarity=0.696 Sum_probs=21.1
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 36 ~~~~C~~C~~~f~~~~~l~~H~~~ 59 (110)
T 2csh_A 36 RPYGCGVCGKKFKMKHHLVGHMKI 59 (110)
T ss_dssp CSEECTTTSCEESSSHHHHHHHTT
T ss_pred cCccCCCCCcccCCHHHHHHHHHH
Confidence 458899999999999999999864
No 248
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=66.77 E-value=2.3 Score=31.64 Aligned_cols=24 Identities=21% Similarity=0.693 Sum_probs=20.8
Q ss_pred Ccccccc--cccccCChHHHHHhhhh
Q 011313 222 SEFYCVL--CGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~--C~K~Fks~~~~~nH~~S 245 (489)
..|.|.+ |++.|.+...|..|+++
T Consensus 46 ~~~~C~~~~C~k~f~~~~~l~~H~~~ 71 (72)
T 2epa_A 46 KPFSCSWKGCERRFARSDELSRHRRT 71 (72)
T ss_dssp CSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred CCccCCCCCCCcccCCHHHHHhHhhc
Confidence 4589976 99999999999999864
No 249
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=66.76 E-value=2.2 Score=36.85 Aligned_cols=24 Identities=29% Similarity=0.660 Sum_probs=19.3
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 77 k~~~C~~C~k~F~~~~~L~~H~~~ 100 (133)
T 2lt7_A 77 RRYQCLACGKSFINYQFMSSHIKS 100 (133)
T ss_dssp CCEEESSSCCEESSHHHHHHHHHH
T ss_pred ccccCCCCCCCcCCHHHHHHHhHH
Confidence 357888888888888888888754
No 250
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.62 E-value=1.3 Score=32.76 Aligned_cols=24 Identities=17% Similarity=0.326 Sum_probs=21.3
Q ss_pred Cccccc-ccccccCChHHHHHhhhh
Q 011313 222 SEFYCV-LCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~-~C~K~Fks~~~~~nH~~S 245 (489)
..|.|. .|++.|.....|..|+++
T Consensus 35 ~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 35 LPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp SEEECTTCCSCCEEETTTHHHHHHT
T ss_pred cCccCCcccCcccccHHHHHHHHHh
Confidence 458899 999999999999999864
No 251
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=66.47 E-value=2.5 Score=31.90 Aligned_cols=21 Identities=38% Similarity=0.762 Sum_probs=15.2
Q ss_pred ccc--cccccccCChHHHHHhhh
Q 011313 224 FYC--VLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 224 ~~C--~~C~K~Fks~~~~~nH~~ 244 (489)
|.| ..|++.|.+...|..|++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~ 24 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQF 24 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHH
T ss_pred ccCCCCCCCcccCCHHHHHHHHH
Confidence 557 777777777777777764
No 252
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=65.43 E-value=2.8 Score=31.11 Aligned_cols=24 Identities=21% Similarity=0.573 Sum_probs=20.9
Q ss_pred Cccccc--ccccccCChHHHHHhhhh
Q 011313 222 SEFYCV--LCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~--~C~K~Fks~~~~~nH~~S 245 (489)
..|.|. .|++.|.+...|..|.++
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~ 43 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRI 43 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHH
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHh
Confidence 468997 599999999999999864
No 253
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=64.82 E-value=2.2 Score=35.62 Aligned_cols=21 Identities=29% Similarity=0.494 Sum_probs=18.1
Q ss_pred CcccccccccccCChHHHHHh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNH 242 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH 242 (489)
..|.|..|+|.|.+...|..|
T Consensus 49 kpf~C~~Cgk~F~~~~~L~~H 69 (102)
T 2ghf_A 49 SSYVCVECNFLTKRYDALSEH 69 (102)
T ss_dssp CCEEETTTTEEESSTHHHHTH
T ss_pred CCcCCCCCCcccCCHHHHHHH
Confidence 357899999999999999888
No 254
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.43 E-value=3.1 Score=32.43 Aligned_cols=23 Identities=13% Similarity=0.192 Sum_probs=20.3
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.+-|..|++.|.+...|..|+++
T Consensus 25 ~~~C~~C~k~f~~~~~L~~H~~~ 47 (95)
T 2ej4_A 25 SRPKKSCDRTFSTMHELVTHVTM 47 (95)
T ss_dssp SSSCCCCCCCCSSHHHHHHHHHH
T ss_pred CCcccccccccCCHHHHHHHHHH
Confidence 35699999999999999999864
No 255
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=64.37 E-value=3.3 Score=35.38 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=21.3
Q ss_pred cCcccccccccccCChHHHHHhhhh
Q 011313 221 RSEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 221 ~~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
...|.|..|++.|.+...|..|++.
T Consensus 23 ~~~~~C~~C~~~f~~~~~L~~H~~~ 47 (155)
T 2rpc_A 23 QLSRPKKSCDRTFSTMHELVTHVTM 47 (155)
T ss_dssp CCSSSCCCCCCCBSSHHHHHHHHHT
T ss_pred hcccccccCCcccCCHHHHHHHHHh
Confidence 3567899999999999999999864
No 256
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=64.37 E-value=2.9 Score=34.27 Aligned_cols=24 Identities=25% Similarity=0.535 Sum_probs=20.0
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~~ 56 (124)
T 1ubd_C 33 RVHVCAECGKAFVESSKLKRHQLV 56 (124)
T ss_dssp CCEECTTTCCEESSHHHHHHHGGG
T ss_pred CCeECCCCCchhCCHHHHHHHHHH
Confidence 457899999999999999998764
No 257
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=63.73 E-value=3.1 Score=31.80 Aligned_cols=22 Identities=23% Similarity=0.584 Sum_probs=14.2
Q ss_pred cccccc--cccccCChHHHHHhhh
Q 011313 223 EFYCVL--CGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 223 ~~~C~~--C~K~Fks~~~~~nH~~ 244 (489)
.|.|.. |++.|.+...|..|++
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~ 28 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLR 28 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHT
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHH
Confidence 456666 6666666666666654
No 258
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.17 E-value=3.6 Score=34.29 Aligned_cols=23 Identities=17% Similarity=0.336 Sum_probs=20.9
Q ss_pred CcccccccccccCChHHHHHhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~ 244 (489)
..|.|..|++.|.+...|..|.+
T Consensus 17 kpy~C~~Cgk~F~~~~~L~~H~r 39 (102)
T 2ghf_A 17 GGYECKYCTFQTPDLNMFTFHVD 39 (102)
T ss_dssp SSEECSSCSCEESCHHHHHHHHH
T ss_pred cCcCCCCCCCccCCHHHHHHHHH
Confidence 46899999999999999999975
No 259
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=61.96 E-value=3.3 Score=31.19 Aligned_cols=21 Identities=19% Similarity=0.284 Sum_probs=12.8
Q ss_pred ccccc---cccccCChHHHHHhhh
Q 011313 224 FYCVL---CGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 224 ~~C~~---C~K~Fks~~~~~nH~~ 244 (489)
|.|.. |++.|.+...|..|++
T Consensus 59 ~~C~~~~~C~~~f~~~~~l~~H~~ 82 (85)
T 2j7j_A 59 YPCKKDDSCSFVGKTWTLYLKHVA 82 (85)
T ss_dssp EECCSCSSCCCEESSHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHH
Confidence 55666 6666666666666654
No 260
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=60.18 E-value=3.8 Score=32.02 Aligned_cols=25 Identities=24% Similarity=0.562 Sum_probs=21.8
Q ss_pred cCcccccc--cccccCChHHHHHhhhh
Q 011313 221 RSEFYCVL--CGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 221 ~~~~~C~~--C~K~Fks~~~~~nH~~S 245 (489)
...|.|.. |++.|.+...|..|+++
T Consensus 13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~ 39 (100)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSSHLKAHLRT 39 (100)
T ss_dssp CCCEECCSSSCCCEESCHHHHHHHHHH
T ss_pred CcceEcCCCCCCCcccCHHHHHHHHHH
Confidence 45789997 99999999999999864
No 261
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=60.02 E-value=3.7 Score=33.14 Aligned_cols=24 Identities=29% Similarity=0.602 Sum_probs=21.2
Q ss_pred Ccccc--cccccccCChHHHHHhhhh
Q 011313 222 SEFYC--VLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C--~~C~K~Fks~~~~~nH~~S 245 (489)
..|.| ..|++.|.+...|..|+++
T Consensus 93 ~~~~C~~~~C~~~f~~~~~L~~H~~~ 118 (119)
T 2jp9_A 93 KPFSCRWPSCQKKFARSDELVRHHNM 118 (119)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred CCeeCCCCCCccccCCHHHHHHHHhc
Confidence 45889 8999999999999999864
No 262
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=59.95 E-value=3.4 Score=36.64 Aligned_cols=24 Identities=25% Similarity=0.650 Sum_probs=20.4
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 160 ~~~~C~~C~~~f~~~~~L~~H~~~ 183 (190)
T 2i13_A 160 KPYKCPECGKSFSRRDALNVHQRT 183 (190)
T ss_dssp CCEECTTTCCEESSHHHHHHHHTT
T ss_pred CCeECCCCCCccCCHHHHHHHHHh
Confidence 468899999999999999999865
No 263
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=58.00 E-value=4.9 Score=34.12 Aligned_cols=23 Identities=26% Similarity=0.413 Sum_probs=20.6
Q ss_pred cccccccccccCChHHHHHhhhh
Q 011313 223 EFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 223 ~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.+.|..|++.|.+...|..|+++
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~ 25 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINS 25 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHH
T ss_pred cCCcCCCccccCCHHHHHHHHHh
Confidence 46799999999999999999875
No 264
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=56.77 E-value=4.7 Score=32.90 Aligned_cols=25 Identities=20% Similarity=0.422 Sum_probs=21.1
Q ss_pred cCccccc--ccccccCChHHHHHhhhh
Q 011313 221 RSEFYCV--LCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 221 ~~~~~C~--~C~K~Fks~~~~~nH~~S 245 (489)
+..|.|. .|++.|.+...|..|+++
T Consensus 3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~ 29 (124)
T 1ubd_C 3 PRTIACPHKGCTKMFRDNSAMRKHLHT 29 (124)
T ss_dssp --CEECCSTTCCCEESSHHHHHHHHGG
T ss_pred CCcccCCCCCCcCccCCHHHHHHHHHH
Confidence 3468899 899999999999999864
No 265
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=53.49 E-value=5.4 Score=34.00 Aligned_cols=22 Identities=32% Similarity=0.404 Sum_probs=20.3
Q ss_pred ccccccccccCChHHHHHhhhh
Q 011313 224 FYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 224 ~~C~~C~K~Fks~~~~~nH~~S 245 (489)
|.|..|++.|.+...|..|+++
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~~ 84 (155)
T 2rpc_A 63 EECPREGKSFKAKYKLVNHIRV 84 (155)
T ss_dssp TTCTTSSCCCSSHHHHHHHTHH
T ss_pred cCCCCcccccCCHHHHHHHHHh
Confidence 6899999999999999999874
No 266
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=53.23 E-value=6.3 Score=29.43 Aligned_cols=23 Identities=26% Similarity=0.683 Sum_probs=20.3
Q ss_pred Ccccccc--cccccCChHHHHHhhh
Q 011313 222 SEFYCVL--CGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~--C~K~Fks~~~~~nH~~ 244 (489)
..|.|.. |++.|.+...|..|++
T Consensus 6 ~~~~C~~~~C~~~f~~~~~L~~H~~ 30 (79)
T 2dlk_A 6 SGMPCDFPGCGRIFSNRQYLNHHKK 30 (79)
T ss_dssp SSEECSSTTTCCEESSHHHHHHHHH
T ss_pred CCccCCCCCCcCccCCHHHHHHHHH
Confidence 4578887 9999999999999986
No 267
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=52.53 E-value=5.6 Score=35.20 Aligned_cols=24 Identities=29% Similarity=0.733 Sum_probs=21.3
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|+++
T Consensus 132 ~~~~C~~C~~~f~~~~~L~~H~~~ 155 (190)
T 2i13_A 132 KPYKCPECGKSFSREDNLHTHQRT 155 (190)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHH
T ss_pred CCeECCCCCcccCCHHHHHHHHHh
Confidence 468899999999999999999864
No 268
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=52.13 E-value=5.8 Score=33.62 Aligned_cols=24 Identities=21% Similarity=0.642 Sum_probs=21.0
Q ss_pred Ccccccc--cccccCChHHHHHhhhh
Q 011313 222 SEFYCVL--CGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~--C~K~Fks~~~~~nH~~S 245 (489)
..|.|.. |++.|.+...|..|+++
T Consensus 127 ~~~~C~~~~C~~~f~~~~~L~~H~~~ 152 (155)
T 2gli_A 127 KPYVCKLPGCTKRYTDPSSLRKHVKT 152 (155)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred CCeeCCCCCCccccCCHHHHHHHHHh
Confidence 4588988 99999999999999864
No 269
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=50.96 E-value=7.9 Score=31.03 Aligned_cols=23 Identities=26% Similarity=0.465 Sum_probs=20.3
Q ss_pred Ccccccc--cccccCChHHHHHhhh
Q 011313 222 SEFYCVL--CGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 222 ~~~~C~~--C~K~Fks~~~~~nH~~ 244 (489)
-.|.|.. |+|.|.....|..|++
T Consensus 26 KPYkC~~~~CgKaFsr~s~L~~H~r 50 (73)
T 1x3c_A 26 RPYRCVHQGCFAAFTIQQNLILHYQ 50 (73)
T ss_dssp CSCBCCSTTCCCBCSSHHHHHHHHH
T ss_pred CCeECCCCCcChhHcCHHHHHHHhh
Confidence 5789975 9999999999999974
No 270
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.69 E-value=1 Score=33.24 Aligned_cols=24 Identities=21% Similarity=0.277 Sum_probs=20.5
Q ss_pred CcccccccccccCChHHHHHhhhh
Q 011313 222 SEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
..|.|..|++.|.+...|..|.++
T Consensus 38 ~~~~C~~C~~~f~~~~~l~~H~~~ 61 (73)
T 2ctu_A 38 KTPMCEKCRKDSCQEAALNKDEGN 61 (73)
T ss_dssp SSCCCHHHHHTCSCCCSSCCCSSC
T ss_pred CCCCCCCCChhhcCHHHHHHHHHh
Confidence 468899999999999999988764
No 271
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=43.41 E-value=10 Score=33.42 Aligned_cols=24 Identities=25% Similarity=0.570 Sum_probs=20.5
Q ss_pred Ccccccc--cccccCChHHHHHhhhh
Q 011313 222 SEFYCVL--CGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C~~--C~K~Fks~~~~~nH~~S 245 (489)
..|.|.. |++.|.+...|..|+++
T Consensus 133 ~~~~C~~~~C~k~F~~~~~L~~H~~~ 158 (190)
T 1tf6_A 133 LPYECPHEGCDKRFSLPSRLKRHEKV 158 (190)
T ss_dssp CSSBCCSSSCCCBCSSHHHHHHHHTS
T ss_pred CCccCCCCCCCchhcCHHHHHHHHHH
Confidence 4588987 99999999999999864
No 272
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=40.66 E-value=12 Score=32.96 Aligned_cols=24 Identities=38% Similarity=0.672 Sum_probs=20.9
Q ss_pred Ccccc--cccccccCChHHHHHhhhh
Q 011313 222 SEFYC--VLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 222 ~~~~C--~~C~K~Fks~~~~~nH~~S 245 (489)
..|.| ..|++.|.+...|..|.++
T Consensus 103 ~~~~C~~~~C~k~f~~~~~L~~H~~~ 128 (190)
T 1tf6_A 103 CVYVCHFENCGKAFKKHNQLKVHQFS 128 (190)
T ss_dssp SCCEECSSSSCEECSSHHHHHHHHGG
T ss_pred ceeeCCCCCCccccCCHHHHHHHHHH
Confidence 35889 8899999999999999875
No 273
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.73 E-value=11 Score=30.18 Aligned_cols=30 Identities=23% Similarity=0.532 Sum_probs=24.1
Q ss_pred ccccccccccC-------ChHHHHHhhhhHHHHHHHHH
Q 011313 224 FYCVLCGKKFK-------SEKQWTNHEQSKKHKEKVAD 254 (489)
Q Consensus 224 ~~C~~C~K~Fk-------s~~~~~nH~~SkkHk~~~~~ 254 (489)
-.|..|.+.|. .-+.|.+|++ ..|...++.
T Consensus 29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~-~~H~~e~~~ 65 (76)
T 2djr_A 29 ATCRLCGRQVSRGPGVNVGTTALWKHLK-SMHREELEK 65 (76)
T ss_dssp EEESSSCCBCCCCSSCCSSSCHHHHHHH-HTTHHHHHH
T ss_pred EECCCCCCccCCCCCCCCchHHHHHHHH-HHCHHHHHh
Confidence 48999999998 4678999996 567766653
No 274
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=38.71 E-value=14 Score=35.02 Aligned_cols=25 Identities=24% Similarity=0.521 Sum_probs=22.0
Q ss_pred cCcccccccccccCC-hHHHHHhhhh
Q 011313 221 RSEFYCVLCGKKFKS-EKQWTNHEQS 245 (489)
Q Consensus 221 ~~~~~C~~C~K~Fks-~~~~~nH~~S 245 (489)
..++.|..|+..|.+ ..+|+.|+..
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~ 192 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQE 192 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHH
Confidence 457899999999998 9999999864
No 275
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding; 2.74A {Arabidopsis thaliana}
Probab=37.47 E-value=21 Score=36.62 Aligned_cols=39 Identities=28% Similarity=0.438 Sum_probs=32.9
Q ss_pred cccc--cccccccCChHHHHHhhhhHHHHHHHHHHHHHhhhh
Q 011313 223 EFYC--VLCGKKFKSEKQWTNHEQSKKHKEKVADLRESFVDE 262 (489)
Q Consensus 223 ~~~C--~~C~K~Fks~~~~~nH~~SkkHk~~~~~l~~~~~~e 262 (489)
-|-| ..|.|.|+-..=+..|+. +||-..|..++..+.++
T Consensus 304 K~~C~~~~C~KLFk~~eFV~KHi~-~KH~e~v~~~~~~v~~~ 344 (358)
T 3ax1_A 304 KYGCGAKGCTKLFHAAEFVYKHLK-LKHTELVTELTTKVREE 344 (358)
T ss_dssp EEEECSSSCCCEESSHHHHHHHHH-HHCHHHHHHHHHHHHHH
T ss_pred ccCCCCCCcCcccCCHHHHHHHHH-hccHHHHHHHHHHHHHH
Confidence 4578 579999999999999997 57999999888877653
No 276
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=35.62 E-value=13 Score=30.69 Aligned_cols=22 Identities=32% Similarity=0.681 Sum_probs=16.6
Q ss_pred cCcccccccccccCChHHHHHhhhh
Q 011313 221 RSEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 221 ~~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.+...|-.|+|.|++ |.-|+.+
T Consensus 19 ~d~iiClecGK~fK~---LkRHL~~ 40 (87)
T 2jsp_A 19 DDHIVCLECGGSFKS---LKRHLTT 40 (87)
T ss_dssp SSCEECTBTCCEESB---HHHHHHH
T ss_pred CCceEecccchhhHH---HHHHHHH
Confidence 355689999999996 4467654
No 277
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=30.55 E-value=25 Score=23.97 Aligned_cols=21 Identities=29% Similarity=0.564 Sum_probs=18.9
Q ss_pred ccccccccccCChHHHHHhhh
Q 011313 224 FYCVLCGKKFKSEKQWTNHEQ 244 (489)
Q Consensus 224 ~~C~~C~K~Fks~~~~~nH~~ 244 (489)
-.|-.|.|.+...+.|..|.+
T Consensus 10 qhcrfckkkysdvknlikhir 30 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIR 30 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 369999999999999999975
No 278
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=30.24 E-value=23 Score=28.17 Aligned_cols=32 Identities=22% Similarity=0.598 Sum_probs=23.3
Q ss_pred cccccccccccC---ChHHHHHhhhhHHHHHHHHHH
Q 011313 223 EFYCVLCGKKFK---SEKQWTNHEQSKKHKEKVADL 255 (489)
Q Consensus 223 ~~~C~~C~K~Fk---s~~~~~nH~~SkkHk~~~~~l 255 (489)
--.|..|.+.|+ +-+-|.+|++ .+|...+..+
T Consensus 29 ~a~Ck~C~~~l~~~g~TSnL~rHL~-~~H~~e~~~~ 63 (73)
T 2ct5_A 29 KIYCRICMAQIAYSGNTSNLSYHLE-KNHPEEFCEF 63 (73)
T ss_dssp CCEETTTTEECCCCSSTHHHHHHHH-HSCHHHHHHH
T ss_pred EEECCCCCccccCCCChHhHHHHHH-HHCHHHHHHH
Confidence 458999999976 4567889977 5676655543
No 279
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=29.09 E-value=13 Score=27.08 Aligned_cols=18 Identities=22% Similarity=0.593 Sum_probs=14.5
Q ss_pred CcccccccccccCChHHH
Q 011313 222 SEFYCVLCGKKFKSEKQW 239 (489)
Q Consensus 222 ~~~~C~~C~K~Fks~~~~ 239 (489)
..|.|..|++.|.....|
T Consensus 13 k~~~C~~C~k~F~~~~~l 30 (62)
T 1vd4_A 13 ASFKCPVCSSTFTDLEAN 30 (62)
T ss_dssp SEEECSSSCCEEEHHHHH
T ss_pred CCccCCCCCchhccHHHh
Confidence 468999999999876554
No 280
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=25.43 E-value=34 Score=29.00 Aligned_cols=26 Identities=23% Similarity=0.520 Sum_probs=22.5
Q ss_pred cCccccc---ccccccCChHHHHHhhhhH
Q 011313 221 RSEFYCV---LCGKKFKSEKQWTNHEQSK 246 (489)
Q Consensus 221 ~~~~~C~---~C~K~Fks~~~~~nH~~Sk 246 (489)
...|.|. -|.|+|.|...|+.|.+-+
T Consensus 56 ~~if~C~~~~~CkrtyLs~rdlqaHI~~~ 84 (101)
T 3vk6_A 56 GSLFMCSIVQGCKRTYLSQRDLQAHINHR 84 (101)
T ss_dssp GGCCCCCCCCCCCCCCSSHHHHHHHHHHH
T ss_pred CCEEECCCCCCHHHHhcCHHHHHHHHHHH
Confidence 4678898 6999999999999999753
No 281
>3vxv_A Methyl-CPG-binding domain protein 4; methyl CPG binding domain, protein-DNA complex, versatIle BA recognition, hydrolase-DNA complex; HET: DNA 5CM; 2.00A {Mus musculus} PDB: 3vxx_A* 3vyb_A* 3vyq_A*
Probab=21.50 E-value=34 Score=26.81 Aligned_cols=25 Identities=20% Similarity=0.264 Sum_probs=21.2
Q ss_pred cCcccccccccccCChHHHHHhhhh
Q 011313 221 RSEFYCVLCGKKFKSEKQWTNHEQS 245 (489)
Q Consensus 221 ~~~~~C~~C~K~Fks~~~~~nH~~S 245 (489)
.+.+|+..|+|.|.|..++...+..
T Consensus 26 ~DvyY~sP~Gkk~RSk~ev~~yL~~ 50 (69)
T 3vxv_A 26 FDVYFISPQGLKFRSKRSLANYLLK 50 (69)
T ss_dssp EEEEEECTTSCEECSHHHHHHHHHH
T ss_pred ceEEEEcCCCCEeeCHHHHHHHHHh
Confidence 3678999999999999998887654
Done!