Query 011314
Match_columns 488
No_of_seqs 168 out of 1127
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 23:58:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011314.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011314hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02611 glutamate--cysteine l 100.0 5E-118 1E-122 937.2 44.4 464 25-488 19-482 (482)
2 TIGR01436 glu_cys_lig_pln glut 100.0 3E-108 6E-113 862.0 41.6 435 54-488 1-446 (446)
3 COG3572 GshA Gamma-glutamylcys 100.0 9E-105 2E-109 791.8 33.0 437 51-488 7-456 (456)
4 TIGR03444 gshA_related glutama 100.0 6.3E-83 1.4E-87 652.5 31.4 373 63-465 1-389 (390)
5 PRK13516 gamma-glutamyl:cystei 100.0 1.1E-64 2.3E-69 524.3 33.3 352 69-487 7-370 (373)
6 PRK13517 carboxylate-amine lig 100.0 4.6E-64 1E-68 521.9 33.8 349 69-487 6-370 (373)
7 PRK13518 carboxylate-amine lig 100.0 1.3E-61 2.7E-66 496.1 31.7 332 74-483 13-356 (357)
8 PRK13515 carboxylate-amine lig 100.0 8.4E-61 1.8E-65 497.4 32.4 349 71-487 3-365 (371)
9 TIGR02048 gshA_cyano glutamate 100.0 4.3E-57 9.4E-62 467.3 30.6 335 75-487 2-361 (376)
10 TIGR02050 gshA_cyan_rel unchar 100.0 3.3E-57 7.2E-62 454.7 23.7 280 75-419 1-286 (287)
11 COG2170 Uncharacterized conser 100.0 2E-55 4.4E-60 435.7 24.5 348 73-487 2-363 (369)
12 PF04107 GCS2: Glutamate-cyste 100.0 5.6E-53 1.2E-57 425.0 6.1 287 76-415 1-288 (288)
13 PRK02471 bifunctional glutamat 99.9 8.5E-27 1.9E-31 260.6 22.8 329 73-472 18-398 (752)
14 PRK02107 glutamate--cysteine l 99.0 1.2E-07 2.7E-12 101.9 23.7 152 73-255 20-203 (523)
15 TIGR01434 glu_cys_ligase gluta 98.9 5.6E-07 1.2E-11 96.8 23.6 151 74-255 17-199 (512)
16 TIGR01435 glu_cys_lig_rel glut 98.6 2.4E-06 5.2E-11 95.9 19.6 152 74-256 8-188 (737)
17 PF04262 Glu_cys_ligase: Gluta 98.6 2.5E-07 5.4E-12 95.8 10.9 155 72-257 17-204 (377)
18 COG2918 GshA Gamma-glutamylcys 98.6 6.2E-06 1.3E-10 85.7 20.0 177 58-260 6-215 (518)
19 PF03074 GCS: Glutamate-cystei 98.2 5.4E-06 1.2E-10 85.1 8.6 256 208-471 6-342 (371)
20 KOG3754 Gamma-glutamylcysteine 98.1 1.3E-05 2.8E-10 83.1 9.8 390 59-471 29-580 (640)
21 PLN02284 glutamine synthetase 97.7 0.0012 2.7E-08 68.7 15.7 157 51-252 103-288 (354)
22 COG0174 GlnA Glutamine synthet 97.5 0.0011 2.4E-08 70.7 13.0 108 48-174 101-229 (443)
23 PLN03036 glutamine synthetase; 97.5 0.0021 4.5E-08 68.5 14.7 154 57-252 167-348 (432)
24 TIGR03105 gln_synth_III glutam 97.3 0.0052 1.1E-07 65.8 14.6 104 51-174 94-221 (435)
25 PF12224 Amidoligase_2: Putati 97.3 0.0039 8.4E-08 61.5 12.6 38 216-253 112-153 (252)
26 PRK09469 glnA glutamine synthe 97.2 0.0071 1.5E-07 65.4 14.8 46 128-174 208-255 (469)
27 TIGR00653 GlnA glutamine synth 97.1 0.011 2.4E-07 63.8 15.2 108 49-174 97-246 (460)
28 PF00120 Gln-synt_C: Glutamine 97.1 0.0071 1.5E-07 60.2 12.7 102 54-174 4-132 (259)
29 PF14395 COOH-NH2_lig: Phage p 78.1 15 0.00033 36.5 9.2 89 73-182 2-94 (261)
30 PF04107 GCS2: Glutamate-cyste 70.0 2.4 5.1E-05 42.9 1.5 39 346-384 213-258 (288)
31 KOG0683 Glutamine synthetase [ 67.6 12 0.00026 38.9 6.0 115 57-182 118-249 (380)
32 PF09899 DUF2126: Putative ami 65.3 2.7E+02 0.0058 32.3 18.7 53 128-184 323-376 (819)
33 TIGR00695 uxuA mannonate dehyd 40.4 1.4E+02 0.0031 31.8 8.8 54 147-203 204-262 (394)
34 TIGR03686 pupylate_PafA protea 39.2 56 0.0012 35.3 5.6 72 75-154 3-76 (453)
35 PF03136 Pup_ligase: Pup-ligas 32.7 73 0.0016 34.5 5.2 53 122-175 67-119 (444)
36 COG1312 UxuA D-mannonate dehyd 30.5 1.9E+02 0.0042 30.1 7.5 83 147-236 182-266 (362)
37 PRK11789 N-acetyl-anhydromuran 26.8 67 0.0015 30.5 3.4 40 70-111 109-148 (185)
38 COG3023 ampD N-acetyl-anhydrom 25.5 63 0.0014 32.2 3.0 42 67-109 98-142 (257)
39 COG1056 NadR Nicotinamide mono 23.5 41 0.00088 31.6 1.2 48 157-204 18-65 (172)
40 TIGR01527 arch_NMN_Atrans nico 23.1 1.7E+02 0.0036 27.2 5.2 49 156-204 13-61 (165)
No 1
>PLN02611 glutamate--cysteine ligase
Probab=100.00 E-value=5.3e-118 Score=937.22 Aligned_cols=464 Identities=85% Similarity=1.414 Sum_probs=454.6
Q ss_pred ccccccccCCceeeeecCCCCCCcccCCCCCCHHHHHHHHHcCCCCCCCCeeEEEeccccccCCCCCCCChhHHHHHHHH
Q 011314 25 DNAGIGIRRGRRSIVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNS 104 (488)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~k~~~~~~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~ 104 (488)
++....+++++++||+++|++++++.+++||++++|++||++|||++++|+||+|||+|+|+.+|++|++|++|.++|+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~gck~~~~~~iG~E~E~f~~~~~~~~pv~y~~i~~lL~~ 98 (482)
T PLN02611 19 DSRRRTTRRGRSVIVAASPPTEEAVVATEPLTKEDLVAYLASGCKPKEKWRIGTEHEKFGFELATLRPMKYDQIAQLLEG 98 (482)
T ss_pred ccccccccccccceecCCCcchhhcccCCCCCHHHHHHHHHhcCCCCCCCeeEEeeeeeeccCCCCCCCCHHHHHHHHHH
Confidence 34445778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccchhcccccccccccCCceeeecCCcceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCC
Q 011314 105 IAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL 184 (488)
Q Consensus 105 l~~~~g~~~~~e~g~~igl~~~~~~islEp~~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~ 184 (488)
|++++||++++|+|+||||.+++.+||+|||||||+|++||.+++++++++..++++++++++++|+.+++.|+||++++
T Consensus 99 l~~~~gw~~~~e~g~iIgl~~~g~~ITlEPGgQiElSt~p~~si~e~~~el~~~~~~l~~~a~~~Gl~l~g~G~hP~~~~ 178 (482)
T PLN02611 99 LAERFGWEKIMEGDNIIGLKQDGQSVSLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWSV 178 (482)
T ss_pred HHHhcCCceeccCCceecccCCCCceEecccceEEecccCcCCHHHHHHHHHHHHHHHHHHHHHcCCCeEccCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchHHHHHHHhcccccchhhhhhcccceeEEeeCCCCHHHHHHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCcc
Q 011314 185 KDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLS 264 (488)
Q Consensus 185 ~~~~~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~e~d~i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s 264 (488)
.+++++||+||++|.+||+++|..|++||+.|||+||||||+|++|+++++|.+++|+|+++|||||||||+|++|||.|
T Consensus 179 ~~~~i~pk~RY~~M~~y~~~~g~~g~~MM~~t~g~QVhvd~~seed~v~~~~~~~~l~Pvl~ALfANSPf~eG~~tG~~S 258 (482)
T PLN02611 179 ADIPIMPKGRYKIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEQDMVRKFRVGLALQPIATALFANSPFTEGKPNGYLS 258 (482)
T ss_pred ccccCCCChHHHHHHHHHHHhhhhhhhhccceEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCcCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhcCCCCCCCCCCCCCCChhhHHHHHHHHhcccceeEeecCceecCCCCcHHHhhhCCCCCCCCCCCChhhhhhc
Q 011314 265 MRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENH 344 (488)
Q Consensus 265 ~R~~iw~~~~~~RtG~~P~~F~~~~~fe~y~~~ll~~p~~~v~r~g~~i~~~~~~~~d~~~~~~~~~~g~rPt~~d~~~h 344 (488)
+|+.+|+++|++|||++|+.|+++++|++|++|+|++|||||+|+|.|++..+.+|+|||+|++++++|++||++||++|
T Consensus 259 ~R~~iW~~~D~~rtg~~P~~F~d~~~fe~yv~~~Ld~Pm~fv~r~g~~~~~~g~tFrd~~~g~~~~~~~~~pt~~D~~~H 338 (482)
T PLN02611 259 YRSHIWTDTDKDRTGMLPFVFDDDFGFERYVDYALDVPMYFVYRNGKYIDCTGMSFRDFMAGKLPQLPGELPTLNDWENH 338 (482)
T ss_pred hHHHHHHhcCCCCCCCCCCcCCChhHHHHHHHHHHCCCeEEEEeCCceecCCCCCHHHHHcCcCccCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred cCCCCCcccccceeeeecCCCCchHHHhHHHHHHHHhhhchhhccchhhcCCcccHHHHHHHHhhhcccCCCCccCCccH
Q 011314 345 LTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVPKTGLKTPFRDGLL 424 (488)
Q Consensus 345 lst~fp~VR~k~~IEiR~~D~~p~~~~~A~aAl~~GLl~~~~~~~~~~~~~~~~~~~~~~~lr~~aar~Gl~a~~~~~~l 424 (488)
|||+||+||+|+|||||++|++|++++||++|||+||+||..+++.+++++++|..+++..||.+++++||++++.+.++
T Consensus 339 LSt~FP~VRlK~~lE~R~aDa~P~~~~~a~~A~~~GLlyd~~al~~a~~l~~~w~~~~r~~lr~~~~~~Gl~~~~~~~~l 418 (482)
T PLN02611 339 LTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEESLQSALDMIADWTPEEREMLRNKVPKTGLKTPFRDGTL 418 (482)
T ss_pred HhcCCCCccccceEEeccccCCChhhhhhHHHHHHHHhcCHHHHHHHHHHhhcCCHHHHHHHHHHHHHhhccCccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHcCCCHHHHHHHHHcCChhhhHHHHHHhhcC
Q 011314 425 RHVAQDVLKLSKDGLERRGFKETGFLNEVAEVVRTGVTPAEKLLDMYHGKWRESVDPVFEELLY 488 (488)
Q Consensus 425 ~~~~~~LL~~a~~gL~~~G~~e~~~L~~l~~~l~~g~t~A~~~l~~~~~~~~~~v~~~~~e~~~ 488 (488)
+++++++|++|++||.++|.+|..||++|.+++++|+|||+++++.|++.|++.|+++|+|++|
T Consensus 419 ~~~a~~~l~lA~~gL~~rg~~E~~~L~~l~~~v~~g~tpAd~~l~~~~~~~~~~~~~~~~~~~~ 482 (482)
T PLN02611 419 KDVAEEVLKLAKDGLERRGYNEEGFLNALAEIVRTGVTPAERLLELYEGKWGRSVDPVFEELLY 482 (482)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHcCCCHHHHHHHHhcchhcCCchHhhhhhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999988
No 2
>TIGR01436 glu_cys_lig_pln glutamate--cysteine ligase, plant type. This model represents one of two highly dissimilar forms of glutamate--cysteine ligase (gamma-glutamylcysteine synthetase), an enzyme of glutathione biosynthesis. The other type is modeled by TIGR01434. This type is found in plants (with a probable transit peptide), root nodule and other bacteria, but not E. coli and closely related species.
Probab=100.00 E-value=2.6e-108 Score=861.95 Aligned_cols=435 Identities=82% Similarity=1.402 Sum_probs=424.2
Q ss_pred CCC-HHHHHHHHHcCCCCCCCCeeEEEeccccccCCCCCCCChhH---HHHHHHHHhhccccchhcccccccccccCCce
Q 011314 54 PLT-KEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQ---IAELLNSIAERFDWEKVMEGDYIIGLKQGKQS 129 (488)
Q Consensus 54 ~~~-~~~l~~~~~~g~k~~~~~~iGvE~E~~~vd~~t~~~~~~~~---i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~ 129 (488)
||| +++||+||++|||+++.|+||+|||+|+|+.+|++|++|++ |.++|++|..++||++++|+|++|||.+++.+
T Consensus 1 ~~~~~~~l~~~~~~g~k~~~~~~iG~E~E~f~~~~~~~~~~~y~~~~gi~~~l~~l~~~~g~~~~~e~g~~i~l~~~~~~ 80 (446)
T TIGR01436 1 PLTSRDDLIAYLAAGCKPKEQWRIGTEHEKFGFEKNTLRPMKYEQKGGIAELLNGIAERFGWQKVMEGDKIIGLKQDKQS 80 (446)
T ss_pred CCCcHHHHHHHHHhCCCcCCCCceEeeeeeeeeecCCCCCCCCCCchhHHHHHHHHHhhcCCceeccCCceeeecCCCCe
Confidence 576 99999999999999999999999999999999999999985 99999999999999999999999999999999
Q ss_pred eeecCCcceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhcccccchh
Q 011314 130 ISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLG 209 (488)
Q Consensus 130 islEp~~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~~g~~g 209 (488)
||+|||||||+|++||.+++++++++..++++++++++++|+++++.|+||++++.+++++||+||+.|.+||+++|..|
T Consensus 81 itlEPggQlElS~~p~~~i~e~~~~l~~~~~~l~~~a~~~Gl~l~~~G~~P~~~~~~~~~~pk~RY~~M~~~~~~~G~~g 160 (446)
T TIGR01436 81 ISLEPGGQFELSGAPLETIHETCDEINSHLYQVKEVAEEMGIGFLGLGFQPKWRREDIPLMPKGRYDIMRNYMPKVGKLG 160 (446)
T ss_pred EEEcCcCeEEecccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEecCCCCCCCcccCCCCCchHHHHHHHHHhhcchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred hhhhcccceeEEeeCCCCHHHHHHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCChh
Q 011314 210 LDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSF 289 (488)
Q Consensus 210 ~~mm~~t~s~QVhld~~~e~d~i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~F~~~~ 289 (488)
++||++|||+|||||++|++++++++|++++|+|+++|||||||||+|++|||.|+|+.+|+++||+|||++|+.|++++
T Consensus 161 ~~mm~~t~g~qVhld~~~e~d~v~~~~~~~~l~Pvl~ALfANSPf~~G~~tG~~S~R~~iW~~~Dp~rtG~~P~~f~~~~ 240 (446)
T TIGR01436 161 LDMMLRTCTVQVNLDFSSEADMVRKFRASLALQPLATALFANSPFLEGKPNGFLSYRSHIWTDTDPDRTGMLPFVFDDSF 240 (446)
T ss_pred HHHhHhheeEEEeeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCCCccchHHHHHHhcCCCcCCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcccceeEeecCceecCCCCcHHHhhhCCCCCCCCCCCChhhhhhccCCCCCcccccceeeeecCCCCchH
Q 011314 290 GFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWR 369 (488)
Q Consensus 290 ~fe~y~~~ll~~p~~~v~r~g~~i~~~~~~~~d~~~~~~~~~~g~rPt~~d~~~hlst~fp~VR~k~~IEiR~~D~~p~~ 369 (488)
+|++|++|++++||||+.|+|.|++..+.+|+|||+++++.++|++|+++||++|+||+||+||+|+|||||++|++|++
T Consensus 241 ~fe~y~~~lld~Pm~~v~r~g~~~~~~g~~f~d~l~g~~~~~~g~~p~~~D~~~HlSt~FpeVRlk~~lE~R~aD~~p~~ 320 (446)
T TIGR01436 241 GFERYVDYALDVPMYFAYRKGKYIDCTGMTFRAFLAGKLPALPGELPTLNDWENHLSTIFPEVRLKRYLEMRGADGGPWR 320 (446)
T ss_pred cHHHHHHHHhhCCeEEEecCCceecCCCCcHHHHhhCcCcccCCCCCCchhHHHHhhccCCCceeCCeEEecccccCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhhhchhhccchhhcCCcccHHHHHHHHhhhcccCCCCccCCc-cHHHHHHHHHHHHHHHHHhcCC----
Q 011314 370 RLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVPKTGLKTPFRDG-LLRHVAQDVLKLSKDGLERRGF---- 444 (488)
Q Consensus 370 ~~~A~aAl~~GLl~~~~~~~~~~~~~~~~~~~~~~~lr~~aar~Gl~a~~~~~-~l~~~~~~LL~~a~~gL~~~G~---- 444 (488)
++||++|||+||+||..+++.+++.++.|..+++..+|..+.|+|+++.+.++ ++++++.+++++|+.||++++.
T Consensus 321 ~~~a~~Al~~gLlyd~~al~~a~~l~~~w~~~~~~~l~~~~~~~gl~a~~~~~~~l~~~a~~~l~la~~gL~~r~~~~~~ 400 (446)
T TIGR01436 321 RLCALPAFWVGLLYDEDLLQAALDLTKDWSPAEREMLRNEVPVTGLKTLFRDGQSLKHLGEDVLKLAKDGLERRGYKNAG 400 (446)
T ss_pred hhhHHHHHHHHHhcCHHHHHHHHHHHhccCHHHHHHHHHHHHHhccccCCCCcchHHHHHHHHHHHHHHHHHhccccccC
Confidence 99999999999999999999999999999999999999999999999999776 9999999999999999999754
Q ss_pred --chhhhHHHHHHHHHcCCCHHHHHHHHHcCChhhhHHHHHHhhcC
Q 011314 445 --KETGFLNEVAEVVRTGVTPAEKLLDMYHGKWRESVDPVFEELLY 488 (488)
Q Consensus 445 --~e~~~L~~l~~~l~~g~t~A~~~l~~~~~~~~~~v~~~~~e~~~ 488 (488)
+|..||++|.+++++|+|+|+++++.|+++|++.++++|.|++|
T Consensus 401 ~~~e~~~L~~L~~i~~~g~t~A~~~l~~~~~~~~~~~~~~~~~~~~ 446 (446)
T TIGR01436 401 GQDESRFLNPVGEVVETGQTPAERLLEMYNGEWGQSVDPVFQELLY 446 (446)
T ss_pred CccchhHHHHHHHHHHcCCCHHHHHHHHhcccccccHHHHHHHhcC
Confidence 56789999999999999999999999999999999999999988
No 3
>COG3572 GshA Gamma-glutamylcysteine synthetase [Coenzyme metabolism]
Probab=100.00 E-value=9.1e-105 Score=791.80 Aligned_cols=437 Identities=61% Similarity=1.074 Sum_probs=424.9
Q ss_pred CCCCCC-HHHHHHHHHcCCCCCCCCeeEEEeccccccCCCCCCCChhH---HHHHHHHHhhccccchhccccccccccc-
Q 011314 51 VTEPLT-KEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQ---IAELLNSIAERFDWEKVMEGDYIIGLKQ- 125 (488)
Q Consensus 51 ~~~~~~-~~~l~~~~~~g~k~~~~~~iGvE~E~~~vd~~t~~~~~~~~---i~~lL~~l~~~~g~~~~~e~g~~igl~~- 125 (488)
...|+| +++|++|+++|+|++++|+||+|||+|++-.++..|++|++ |..+|..+. ++||+|++|.|++|||..
T Consensus 7 ~~~~~t~~~~L~~~~a~g~k~~~~~riGtEhEkf~f~l~g~~pv~~e~e~~i~a~L~g~~-r~gwepI~d~gn~I~L~~p 85 (456)
T COG3572 7 TETPLTSVAELTDYLAKGDKEKTDWRIGTEHEKFGFYLDGLSPVPYEGEAGIFALLDGMQ-RLGWEPIMDVGNIIGLVEP 85 (456)
T ss_pred cccccchHHHHHHHhccCCCcchhhcccchhcccceeecCCCCCCcccccchHHHhhhhh-hcCceeeccccceeeeccC
Confidence 456899 99999999999999999999999999999998879999985 999999997 799999999999999998
Q ss_pred -CCceeeecCCcceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhccc
Q 011314 126 -GKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPK 204 (488)
Q Consensus 126 -~~~~islEp~~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~ 204 (488)
+++.||+|||||||+|++|.++++|+|.+.++++.+++++|++.|++|++.|.||+|...+.|++||+||++|.+||++
T Consensus 86 ~g~~aIslEpggq~Elsgapletihq~~~e~n~hlavlr~~a~~~gl~fvGlG~~Pkw~r~e~p~mpk~RY~iM~~Ympk 165 (456)
T COG3572 86 IGQGAISLEPGGQFELSGAPLETIHQTCGEMNQHLAVLREIAAELGLGFVGLGGSPKWTRAEVPVMPKSRYAIMTRYMPK 165 (456)
T ss_pred CCCceEEeccCceEEecCCchHHHHHHHHHHHHHHHHHHHHHHhcCCceEeecCCCccccCcCCCCCchHHHHHHHHHhh
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhcccceeEEeeCCCCHHHHHHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCC
Q 011314 205 VGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFV 284 (488)
Q Consensus 205 ~g~~g~~mm~~t~s~QVhld~~~e~d~i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~ 284 (488)
+|..|.+||.+||++|||||++|++|+++++|++++|+|+.+||||||||.+|+++||.|+|..||+++||+|||++|++
T Consensus 166 vg~~glDMm~rtctiQVNLD~sse~dm~rk~rvs~~Lqp~ataLFANSpFtegkpng~lS~R~~iW~dtd~~r~G~l~~~ 245 (456)
T COG3572 166 VGVKGLDMMTRTCTIQVNLDFSSETDMRRKMRVSLALQPLATALFANSPFTEGKPNGLLSWRGDIWRDTDPQRSGVLPFA 245 (456)
T ss_pred cCCcchhhhhhhheeEEeeccCcchhHHHHHHHHhhhhHHHHHHHccCCccCCCCccchhhhhhhhhccCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHhcccceeEeecCceecCCCCcHHHhhhCCCC-CCCCCCCChhhhhhccCCCCCcccccceeeeecC
Q 011314 285 FDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLP-CLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGA 363 (488)
Q Consensus 285 F~~~~~fe~y~~~ll~~p~~~v~r~g~~i~~~~~~~~d~~~~~~~-~~~g~rPt~~d~~~hlst~fp~VR~k~~IEiR~~ 363 (488)
|.+.|+|.+|++|++++||||+.|.|.|+++.+.+|++|+++.++ .++|.+|+..||.+|+||+||+||+|+|||||++
T Consensus 246 f~d~fgf~dY~~~aldvpmyfv~r~~~y~d~~~~sfr~f~~gal~gel~~~~pt~~D~~~HlstlFpdVrlk~~lEmRga 325 (456)
T COG3572 246 FSDDFGFIDYVNYALDVPMYFVRRTGHYHDCAHVSFRQFMAGALKGELPGRRPTMKDWTNHLSTLFPDVRLKRFLEMRGA 325 (456)
T ss_pred ccCCCCHHHHHHHhhcCcEEEeccCCceeccceeeHHHHhccccccccccccCchhhhhhhhhhcCCCcchhceeEeecc
Confidence 999999999999999999999999999999999999999999987 6899999999999999999999999999999999
Q ss_pred CCCchHHHhHHHHHHHHhhhchhhccchhhcCCcccHHHHHHHHhhhcccCCCCccCCccHHHHHHHHHHHHHHHHHhc-
Q 011314 364 DGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVPKTGLKTPFRDGLLRHVAQDVLKLSKDGLERR- 442 (488)
Q Consensus 364 D~~p~~~~~A~aAl~~GLl~~~~~~~~~~~~~~~~~~~~~~~lr~~aar~Gl~a~~~~~~l~~~~~~LL~~a~~gL~~~- 442 (488)
|++||+++||++|||+||+||..+++.+++.+++|..++...||+++.++||.+++.+.++.++++++|.+++.||.+|
T Consensus 326 d~gP~~r~cAlpAfwvGLLyd~~aLdAa~dl~~~~~~~e~~alR~~vp~~~l~~~~~~~t~~~iA~~~l~is~~GL~~R~ 405 (456)
T COG3572 326 DSGPWRRICALPAFWVGLLYDPEALDAAEDLTKDWTYEEVLALRNAVPKKGLAAEFAGNTLLEIAKDVLPISRIGLKNRL 405 (456)
T ss_pred cCCCchhhhhhHHHHHHHhcCHHHHHHHHHhcccchHHHHHHHHHhcchhhhhhhhhcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -----CCchhhhHHHHHHHHHcCCCHHHHHHHHHcCChhhhHHHHHHhhcC
Q 011314 443 -----GFKETGFLNEVAEVVRTGVTPAEKLLDMYHGKWRESVDPVFEELLY 488 (488)
Q Consensus 443 -----G~~e~~~L~~l~~~l~~g~t~A~~~l~~~~~~~~~~v~~~~~e~~~ 488 (488)
|.+|..||++|++++..|.|.|++++..|+|.|++.|+++|.|++|
T Consensus 406 ~~N~d~~det~~L~~Ldev~a~g~t~Ae~~l~~y~g~w~~~~~~vf~~~~y 456 (456)
T COG3572 406 VLNGDGGDETIFLDPLDEVLAGGTTIAEAMLSLYHGAWGGSIEPVFNEYAY 456 (456)
T ss_pred hhcCCccccchhcchHHHHHhcCCchHHHHHHHhccccCCccchhhHhhcC
Confidence 2345569999999999999999999999999999999999999998
No 4
>TIGR03444 gshA_related glutamate--cysteine ligase family protein. Members of this bacterial protein family bear homology to glutamate--cysteine ligase, an enzyme in the two-step pathway of glutathione (GSH) biosynthesis, but are distinctly different. Among the bacterial genomes that carry the uncharacterized methyltransferase (TIGR03438) and conserved hypothetical protein TIGR03440, this protein is found in a subset, always in the vicinity of these other genes. Conserved hypothetical protein TIGR03442 is found in these same genomes. The role of this cassette is probably biosynthetic, but the product is unknown.
Probab=100.00 E-value=6.3e-83 Score=652.55 Aligned_cols=373 Identities=30% Similarity=0.468 Sum_probs=329.1
Q ss_pred HHHcCC-CCCCCCeeEEEeccc--------cccCCCC-CCCChhHHHHHHHHHhhccccchhcccccccccccCCceeee
Q 011314 63 YLASGC-KPKEKWRIGTEHEKF--------GFEFGTL-HPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISL 132 (488)
Q Consensus 63 ~~~~g~-k~~~~~~iGvE~E~~--------~vd~~t~-~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~isl 132 (488)
|++.+| |..+..++|+|+|++ ++|..+. .+++.+.+..++..+.. +..+.+.+||+
T Consensus 1 ~~~~~c~~~gp~~~~g~e~ew~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~lp~g~~iTl 66 (390)
T TIGR03444 1 YIGGVCFKDGPPGLVGLELEWLTVQTPAAHCPDLAAPTRRPSPHRIRAVIPGSPA--------------PPLPGGSRITV 66 (390)
T ss_pred CCcccccCCCCCceeeEEEEeeeccccccccCCCCCccCCCChHHHHhhhccccC--------------CCCCCCCeEEe
Confidence 456678 567889999999999 4544432 35565556666654321 12356789999
Q ss_pred cCCcceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhcc-cccchhhh
Q 011314 133 EPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMP-KVGSLGLD 211 (488)
Q Consensus 133 Ep~~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~-~~g~~g~~ 211 (488)
|||||||+|++||.+++++++++.+++++++++++++|++|+++|+||+.. +++++||+||+.|.+||+ ++|..|++
T Consensus 67 EPGgQvELSt~P~~sl~el~~el~~~l~~l~~~a~~~Gl~lva~G~~P~~~--~~~itpk~RY~~M~~~~~~~~G~~G~~ 144 (390)
T TIGR03444 67 EPGGQLELSGPPADGLTAAVAALAADLAVLRAALAEDGLALVGLGADPLRP--PRRVLPGPRYRAMEQFFATGIGPFGAL 144 (390)
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeccCCCCC--ccCCCchHHHHHHHHHhhhccCchHHH
Confidence 999999999999999999999999999999999999999999999999955 689999999999999998 78899999
Q ss_pred hhcccceeEEeeCCC-CHHHHHHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCCh-h
Q 011314 212 MMFRTCTVQVNLDFS-SEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDS-F 289 (488)
Q Consensus 212 mm~~t~s~QVhld~~-~e~d~i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~F~~~-~ 289 (488)
||.+|||+|||||+. |++|+.+++|.+++++|+++|||||||||+|++|||+|+|+.+|+++|++||| |+.|+++ +
T Consensus 145 MM~~tasVQV~ld~~~~e~D~~~k~rva~aL~PvLlALfANSPf~~Gr~tG~~S~R~~iW~~~d~~Rtg--p~~~~~~~~ 222 (390)
T TIGR03444 145 MMCSTASVQVNLDAGTDPAEWAERWRLAHALGPVLIAAFANSPALGGRPTGWRSTRQRVWGQLDAARTG--PVLAASGDD 222 (390)
T ss_pred HhhCceeEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCCCchhhHHHHHhhCCCCCCC--CCCCCCCCC
Confidence 999999999999999 49999999999999999999999999999999999999999999999999999 6667765 7
Q ss_pred hHHHHHHHHhcccceeEe--ecCceecCC-CCcHHHhhhCCCCCCCCCCCChhhhhhccCCCCCcccccceeeeecCCCC
Q 011314 290 GFEQYVDYALDVPMYFVY--RKKKYIDCA-GMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGG 366 (488)
Q Consensus 290 ~fe~y~~~ll~~p~~~v~--r~g~~i~~~-~~~~~d~~~~~~~~~~g~rPt~~d~~~hlst~fp~VR~k~~IEiR~~D~~ 366 (488)
.|++|++|+|++|||||+ ++|.+++.. +.+|+|||+| ++.++|++||.+||++||||+||+||+|+|||||++|++
T Consensus 223 ~~~~ya~y~Ld~P~~~v~~~~~g~~~~~~~g~tF~d~~~g-~~~~~~~~pt~~D~~~HLsTlFP~VR~k~~lEiR~~Da~ 301 (390)
T TIGR03444 223 PADDWARYALDAPLMCVRNPDDGEPVPVTDGVTFADWVAG-RDPVIGRRPTRADLDYHLTTLFPPVRPRGWLELRYLDAQ 301 (390)
T ss_pred cHHHHHHHHhCCCeEEEEECCCCceeeCCCCcCHHHHHcc-CcccCCCCCCHHHHHHHHhccCCCccccceeEeecccCC
Confidence 899999999999999999 888899988 7999999999 667889999999999999999999999999999999999
Q ss_pred chHHHhHHHHHHHHhhhchhhccchhhcCCcccHHHHHHHHhhhcccCCCCccCCccHHHHHHHHHHHHHHHHHhcCCch
Q 011314 367 PWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVPKTGLKTPFRDGLLRHVAQDVLKLSKDGLERRGFKE 446 (488)
Q Consensus 367 p~~~~~A~aAl~~GLl~~~~~~~~~~~~~~~~~~~~~~~lr~~aar~Gl~a~~~~~~l~~~~~~LL~~a~~gL~~~G~~e 446 (488)
|++..++++|||+||+||..+++.+++.+++| +++ |..|+|+||.++ +|++++.++|++|+++|.. .+.+
T Consensus 302 p~~~~~a~~A~~~gLlyD~~al~~a~~~~~~~--~~~---~~~a~r~gl~~~----~l~~~A~~~~~~a~~~~~~-~~~~ 371 (390)
T TIGR03444 302 PGDGWPVPVATLTALLDDPVAAAEAAEAAAPV--ATR---WDDAARLGLADR----ELRAAAVRCLDLAAARAPT-ELAE 371 (390)
T ss_pred ChhhcchHHHHHHHHhcCHHHHHHHHHHHHHH--HHH---HHHHHHhccCCh----HHHHHHHHHHHHHHhhCCh-hhHH
Confidence 99999999999999999999999999999999 343 458999999865 8999999999999998873 2222
Q ss_pred hhhHHHHHHHHHcCCCHHH
Q 011314 447 TGFLNEVAEVVRTGVTPAE 465 (488)
Q Consensus 447 ~~~L~~l~~~l~~g~t~A~ 465 (488)
...+..++.+++|++|||
T Consensus 372 -~~~~~~~~~~~~gr~p~d 389 (390)
T TIGR03444 372 -AVLDLAARYVDRGRCPAD 389 (390)
T ss_pred -HHHHHHHHHHhcCCCCCC
Confidence 233444567999999986
No 5
>PRK13516 gamma-glutamyl:cysteine ligase; Provisional
Probab=100.00 E-value=1.1e-64 Score=524.27 Aligned_cols=352 Identities=19% Similarity=0.191 Sum_probs=313.5
Q ss_pred CCCCCCeeEEEeccccccCCCCCCCChhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCC
Q 011314 69 KPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLET 147 (488)
Q Consensus 69 k~~~~~~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~ 147 (488)
+.++..++|||+|+++||++|+.+++.+ .++|+.+... .-+..|+.| +.+|||++|+||.+
T Consensus 7 ~~~~~~t~GvE~E~~LVD~~t~~~~~~~--~~vl~~~~~~----------------~~~~~v~~El~~~qIEi~T~p~~~ 68 (373)
T PRK13516 7 HVSEPFTLGVELELQLVNPHDYDLTQDS--SDLLRAVKNQ----------------PTAGEIKPEITESMIEIATGVCRD 68 (373)
T ss_pred CCCCCCeeEEEEEEEeEcCCCcCcCccH--HHHHHhcccc----------------ccccccChhhhCceEEEcCCCCCC
Confidence 4556789999999999999999999877 8888765431 013468999 78999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEEeeCCCC
Q 011314 148 LHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSS 227 (488)
Q Consensus 148 l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~ 227 (488)
+.++.++|.+.++.++++|+++|+.|++.|+||+..+.+++++|++||+.|.+.| |.++++++ +||+||||+++|
T Consensus 69 ~~el~~eL~~~r~~l~~~A~~~G~~lva~GthP~~~~~~~~it~~~RY~~l~~~~---~~~~~~~~--i~G~HVHvg~~d 143 (373)
T PRK13516 69 IDQALGQLSAMRDVLVQAADKLNIGICGGGTHPFQQWQRQRICDNPRFQYLSELY---GYLAKQFT--VFGQHVHIGCPS 143 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEEeecCCCCCCccccCCCCcHHHHHHHHHh---hhhhhhhe--eeeeEEEeCCCC
Confidence 9999999999999999999999999999999999999889999999999999999 56678877 999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCChhhHHHHHHHHhcccceeEe
Q 011314 228 EADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVY 307 (488)
Q Consensus 228 e~d~i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~F~~~~~fe~y~~~ll~~p~~~v~ 307 (488)
.+++++++|.+..++|+++|||||||||+|++|||+|+|+.+|+++| ++|.+ +.|.+|.+|++|++.++++
T Consensus 144 ~~~av~~~~~l~~~lP~llALsAsSPf~~G~dTG~~S~R~~~~~~~P--~~G~p-p~~~~~~~y~~~~~~l~~~------ 214 (373)
T PRK13516 144 GDDALYLLHGLSRYVPHFIALSASSPYVQGVDTGFASARLNSVSAFP--LSGRA-PFVLNWQEFEAYFRKMSYT------ 214 (373)
T ss_pred HHHHHHHHHHHHhHhHHHHHHHhCCccccCcCCcchhHHHHHHhcCC--CCCCC-CCcCCHHHHHHHHHHHHHc------
Confidence 99999999999999999999999999999999999999999999999 88874 5699999999999999987
Q ss_pred ecCceecCCCCcHHHhhhCCCCCCCCCCCChhhhhhccCCCCCcccccceeeeecCCCCc-hHHHhHHHHHHHHhhhchh
Q 011314 308 RKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGP-WRRLCALPAFWVGLLYDED 386 (488)
Q Consensus 308 r~g~~i~~~~~~~~d~~~~~~~~~~g~rPt~~d~~~hlst~fp~VR~k~~IEiR~~D~~p-~~~~~A~aAl~~GLl~~~~ 386 (488)
+.|...++.|||+ ||+ .|++| ||||+||+|+ ++++++++||+++|+....
T Consensus 215 ---G~i~d~~~~~Wdv-----------Rp~-----~~~~T----------vEiRv~D~~~~~~~~~~iaal~~alv~~~~ 265 (373)
T PRK13516 215 ---GVIDSMKDFYWDI-----------RPK-----PEFGT----------VEVRVMDTPLTLERAAAIAAYIQALARWLL 265 (373)
T ss_pred ---CCcCCCCeeEEEe-----------ccC-----CCCCC----------eEEecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4677778888887 777 67777 9999999999 8999999999999986654
Q ss_pred hccchhhc-CCc-ccHHHHHHHHhhhcccCCCCccCC------ccHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHH
Q 011314 387 SLQNVLDM-TAD-WTTGERQMLRNKVPKTGLKTPFRD------GLLRHVAQDVLKLSKDGLERRGFKETGFLNEVAEVVR 458 (488)
Q Consensus 387 ~~~~~~~~-~~~-~~~~~~~~lr~~aar~Gl~a~~~~------~~l~~~~~~LL~~a~~gL~~~G~~e~~~L~~l~~~l~ 458 (488)
.. ..... .+. |..++|+| +|+|+||++.+.+ .++++++++|++..++.|+++|+.+ ++..+.++++
T Consensus 266 ~~-~~~~~~~~~~~~~~~n~w---rAaR~Gl~g~~id~~~~~~~p~~~~l~~ll~~~~p~~~~~g~~~--~~~~~~~~~~ 339 (373)
T PRK13516 266 TE-RPFKPQEDDYLVYTFNRF---QACRFGLEGVLVDPATGERRPLAEDILRTLDRIAPHAEALGASS--ALEALRRQVK 339 (373)
T ss_pred hc-CCCCCCcChHHHHHHHHH---HHHHhCCCceEEcCCCCcEEEHHHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHH
Confidence 33 22233 556 77899999 8999999988754 4899999999999999999999865 4889999999
Q ss_pred cCCCHHHHHHHHHc--CChhhhHHHHHHhhc
Q 011314 459 TGVTPAEKLLDMYH--GKWRESVDPVFEELL 487 (488)
Q Consensus 459 ~g~t~A~~~l~~~~--~~~~~~v~~~~~e~~ 487 (488)
+|.|+|+||++.|+ |++++||+.+.+|++
T Consensus 340 ~g~~~a~rqr~~~~~~~~l~~Vv~~~~~~~~ 370 (373)
T PRK13516 340 SGLNDAQWLREFYADGGSLIELVRQQCERWA 370 (373)
T ss_pred hCCCHHHHHHHHHHhCCCHHHHHHHHHHHhc
Confidence 99899999999994 689999999999975
No 6
>PRK13517 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=4.6e-64 Score=521.92 Aligned_cols=349 Identities=23% Similarity=0.270 Sum_probs=309.7
Q ss_pred CCCCCCeeEEEeccccccCCCCCCCChhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCC
Q 011314 69 KPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLET 147 (488)
Q Consensus 69 k~~~~~~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~ 147 (488)
+.++.++||||+|+++||++|++++++. .++|+.+... ..+..|+.| .++|||++|+||.+
T Consensus 6 ~~~~~~tiGvE~E~~lVD~~t~~~~~~~--~~vl~~~~~~----------------~~~~~i~~El~~~qiEi~t~p~~~ 67 (373)
T PRK13517 6 AGSPRPTLGVEWELLLVDPETGELSPRA--AEVLAAAGED----------------DEGPHLQKELLRNTVEVVTGVCDT 67 (373)
T ss_pred CCCCCCeeEeeeeEeeECCCcCCcCccH--HHHHHhcccc----------------cCCCcccccccCCEEEECCCCCCC
Confidence 4567789999999999999999999887 8888875431 124679999 58999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEEeeCCCC
Q 011314 148 LHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSS 227 (488)
Q Consensus 148 l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~ 227 (488)
+.++.++|.+.++.+.++++++|+.|++.|+||+.++.+++++|++||+.|.+++ |..+++|| +||+||||++++
T Consensus 68 ~~el~~~L~~~~~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~~~~RY~~m~~~~---~~~~~~~~--~~g~hVhv~v~~ 142 (373)
T PRK13517 68 VAEARADLRRTRALARRAAERRGARLAAAGTHPFSDWSEQPVTDKPRYAELIERT---QWWARQQL--ICGVHVHVGVPS 142 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEEeeCCCCCCCCccCCCCCchHHHHHHHHH---HHHHHhhe--eeeeEEEeCCCC
Confidence 9999999999999999999999999999999999999899999999999999998 56789999 999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCChhhHHHHHHHHhcccceeEe
Q 011314 228 EADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVY 307 (488)
Q Consensus 228 e~d~i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~F~~~~~fe~y~~~ll~~p~~~v~ 307 (488)
.+++++++|.++.++|+++|||||||||+|++|||+|+|+.+|+++| ++| +|+.|+++.+|++|+++++++
T Consensus 143 ~~~~i~~~n~l~~~lP~llALsAnSPf~~G~dtg~~S~R~~~~~~~p--~~G-~p~~f~s~~~y~~~v~~l~~~------ 213 (373)
T PRK13517 143 REKVVPVINRLRPWLPHLLALSANSPFWRGEDTGYASNRAMLFQQLP--TAG-PPPQFGSWAEYEAYVADLLKT------ 213 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhcCCCCcchhHHHHHHHhCC--CCC-CCccCCCHHHHHHHHHHHHHc------
Confidence 99999999999999999999999999999999999999999999998 456 577899999999999999875
Q ss_pred ecCceecCCCCcHHHhhhCCCCCCCCCCCChhhhhhccCCCCCccccc---ceeeeecCCCCc-hHHHhHHHHHHHHhhh
Q 011314 308 RKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK---RYLEMRGADGGP-WRRLCALPAFWVGLLY 383 (488)
Q Consensus 308 r~g~~i~~~~~~~~d~~~~~~~~~~g~rPt~~d~~~hlst~fp~VR~k---~~IEiR~~D~~p-~~~~~A~aAl~~GLl~ 383 (488)
| .+ .|.+++|+|||++ ++||||+||+|| ++++++++||++||++
T Consensus 214 --g-~i-----------------------------~~~~~iwwdvRp~~~~~tiEiRv~D~~~~~~~~~~~aal~~~Lv~ 261 (373)
T PRK13517 214 --G-VI-----------------------------LDEGMVYWDIRPSPKLGTVEVRVADVCLTLRELVALAALVRCLVV 261 (373)
T ss_pred --C-Cc-----------------------------CCCCceEEecccCCCCCceeEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 3 33 3566777777776 459999999999 8999999999999998
Q ss_pred chhh---ccchhhcCCcccHHHHHHHHhhhcccCCCCccCC------ccHHHHHHHHHHHHHHHHHhcCCchhhhHHHHH
Q 011314 384 DEDS---LQNVLDMTADWTTGERQMLRNKVPKTGLKTPFRD------GLLRHVAQDVLKLSKDGLERRGFKETGFLNEVA 454 (488)
Q Consensus 384 ~~~~---~~~~~~~~~~~~~~~~~~lr~~aar~Gl~a~~~~------~~l~~~~~~LL~~a~~gL~~~G~~e~~~L~~l~ 454 (488)
.... ........+++...+|+| +|+|+|+++.+.+ .++++++++||+.++++|+++|+.+. ++.+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~n~w---rAar~Gl~a~~~~~~~~~~~p~~~~~~~ll~~~~~~l~~~g~~~~--~~~~~ 336 (373)
T PRK13517 262 TADRRLDAGEPLPTLPPWHVQENKW---RAARYGLDAEIIDDADGRERPVTDDLRDLLERLEPVARELGCAEE--LAGVA 336 (373)
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHH---HHHhcCCCceeecCCCCcEeEHHHHHHHHHHHHHHHHHHcCCHHH--HHHHH
Confidence 6542 234455667788889998 8999999988653 38999999999999999999998764 68899
Q ss_pred HHHHcCCCHHHHHHHHHc--CChhhhHHHHHHhhc
Q 011314 455 EVVRTGVTPAEKLLDMYH--GKWRESVDPVFEELL 487 (488)
Q Consensus 455 ~~l~~g~t~A~~~l~~~~--~~~~~~v~~~~~e~~ 487 (488)
+++++| |+|+||++.|+ |++++||+.+.+|+.
T Consensus 337 ~i~~~g-~~A~rqr~~~~~~~~l~~vv~~~~~~~~ 370 (373)
T PRK13517 337 EILRRG-AGYQRQRRVAERHGDLRAVVDALVAETR 370 (373)
T ss_pred HHHHcC-CHHHHHHHHHHhcCCHHHHHHHHHHHhh
Confidence 999988 99999999994 689999999999874
No 7
>PRK13518 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=1.3e-61 Score=496.12 Aligned_cols=332 Identities=16% Similarity=0.138 Sum_probs=285.8
Q ss_pred CeeEEEeccccccCCCCCCCChhHHHHHHHHHhhccccchhcccccccccccCCceeeecC-CcceeeecCccCCHHHHH
Q 011314 74 WRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEP-GGQFELSGAPLETLHQTC 152 (488)
Q Consensus 74 ~~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islEp-~~qiEis~~p~~~l~~~~ 152 (488)
.++|||+|+++||+. +.+++.. ...+|..+... .-+..|+.|. .+|||++|+||.++.++.
T Consensus 13 ~TlGvEeE~~lvD~~-~~~~~~~-~~~vl~~~~~~----------------~~~~~~~~El~~~qvEi~T~~~~~~~el~ 74 (357)
T PRK13518 13 GTLGIEEEFFVVDEY-GRPTSGT-DELVYEHEPPE----------------ILAGRLDHELFKFVIETQTPLIEDPSEAG 74 (357)
T ss_pred CceEEEEEEEEECCC-CCcccch-hHHHHHhcccc----------------cCCCcccccccCceEEEcCcCcCCHHHHH
Confidence 499999999999998 7766421 15555543220 0134689995 699999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEEeeCCCCHHHHH
Q 011314 153 AEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMI 232 (488)
Q Consensus 153 ~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~e~d~i 232 (488)
++|...++.+.++|+++|+.+++.|+||+.+|.+++++||+||+.|.+.+ |..++.+. +||+||||++++.++.+
T Consensus 75 ~~L~~~r~~l~~aa~~~g~~l~a~GthP~~~~~~~~~t~~~RY~~m~~~~---~~~~~~~~--~~G~HVHVg~~d~d~av 149 (357)
T PRK13518 75 AALREVRDALVDHAAAHGYRIAAAGLHPAAKWRELEHAEKPRYRSQLDRI---QYPQHRNT--TAGLHVHVGVDDADKAV 149 (357)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEecCCCCCCCccccCCCCCcHHHHHHHhc---ccchhcce--eeEEEEEeCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999998877 44455544 99999999999999999
Q ss_pred HHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCChhhHHHHHHHHhcccceeEeecCce
Q 011314 233 RKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKY 312 (488)
Q Consensus 233 ~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~F~~~~~fe~y~~~ll~~p~~~v~r~g~~ 312 (488)
..+|.++.++|+++|||||||||+|++|||+|+|+.+|+++| ++|. |+.|+++++|++|++.++++ +.
T Consensus 150 ~v~n~lr~~LP~LlALsAnSPf~~G~dTG~aS~R~~iw~~~P--~aG~-p~~f~~~~~ye~~v~~l~~~---------G~ 217 (357)
T PRK13518 150 WIANELRWHLPILLALSANSPYWNGFDTGLASARAKIFEGLP--NTGM-PTAFEDFEAFQRFERRMVET---------GS 217 (357)
T ss_pred HHHHHHHhHHHHHHHHHcCCccccCcCCCcccHHHHHHHhCC--CCCC-CcccCCHHHHHHHHHHHHhc---------CC
Confidence 999999999999999999999999999999999999999999 6886 88999999999999999998 35
Q ss_pred ecCCCCcHHHhhhCCCCCCCCCCCChhhhhhccCCCCCcccccceeeeecCCCCc-hHHHhHHHHHHHHhhhchhhc---
Q 011314 313 IDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGP-WRRLCALPAFWVGLLYDEDSL--- 388 (488)
Q Consensus 313 i~~~~~~~~d~~~~~~~~~~g~rPt~~d~~~hlst~fp~VR~k~~IEiR~~D~~p-~~~~~A~aAl~~GLl~~~~~~--- 388 (488)
|...++.|||+ ||+ .|++| ||+|+||+|| ++++++++||+++|+......
T Consensus 218 i~d~~~i~wdv-----------Rps-----~~~pT----------vEiRv~D~~~~~~~~~~lAal~raLv~~~~~~~~~ 271 (357)
T PRK13518 218 IEDRGELWYDV-----------RPH-----TGHGT----------VEVRTPDAQADPDVVLAFVEYVHALVTDLAERYED 271 (357)
T ss_pred cCCCCceEEcc-----------CCC-----CCCCc----------eeEecCCCCCCHHHHHHHHHHHHHHHHHHHhcccc
Confidence 67778999998 887 77777 9999999999 899999999999998654322
Q ss_pred cchhhcCCcccHHHHHHHHhhhcccCCCCccCC------ccHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHcCCC
Q 011314 389 QNVLDMTADWTTGERQMLRNKVPKTGLKTPFRD------GLLRHVAQDVLKLSKDGLERRGFKETGFLNEVAEVVRTGVT 462 (488)
Q Consensus 389 ~~~~~~~~~~~~~~~~~lr~~aar~Gl~a~~~~------~~l~~~~~~LL~~a~~gL~~~G~~e~~~L~~l~~~l~~g~t 462 (488)
......+..+...+|+| +|+|+||++.+.+ .|+++++++|++.. .+..+.+++++| |
T Consensus 272 g~~~~~~~~~~~~~n~W---rAaR~Gl~g~lid~~~~~~~p~~~~l~~ll~~~-------------~~~~~~~~~~~g-~ 334 (357)
T PRK13518 272 GESGTTLRRELLDENKW---RAMRHGHDASFIDRDGEGTVDLGELVDRECDRL-------------GVDGIRDLYDAE-S 334 (357)
T ss_pred CCCCccCCHHHHHHHHH---HHHhhCCCceEEeCCCCeEeEHHHHHHHHHHHH-------------HHHHHHHHHHcC-C
Confidence 23455667788999999 8999999988653 48999999998876 256788889877 8
Q ss_pred HHHHHHHHHc-CChhhhHHHHH
Q 011314 463 PAEKLLDMYH-GKWRESVDPVF 483 (488)
Q Consensus 463 ~A~~~l~~~~-~~~~~~v~~~~ 483 (488)
+|+|||+.|+ |++.+||+.++
T Consensus 335 ~A~rQr~~~~~~~l~~Vv~~~~ 356 (357)
T PRK13518 335 GAQRQRRLLEEEGVDALCESLL 356 (357)
T ss_pred HHHHHHHHHHhCCHHHHHHHhc
Confidence 9999999994 77999999874
No 8
>PRK13515 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=8.4e-61 Score=497.36 Aligned_cols=349 Identities=21% Similarity=0.308 Sum_probs=305.6
Q ss_pred CCCCeeEEEeccccccCCCCCCCChhHHHHHHHHHhhccccchhcccccccccccCCceeeecC-CcceeeecCccCCHH
Q 011314 71 KEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEP-GGQFELSGAPLETLH 149 (488)
Q Consensus 71 ~~~~~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islEp-~~qiEis~~p~~~l~ 149 (488)
.+.+++|+|+|+++||+.|+++++.. .++|...... .+..|+.|. .+|||++|+||.++.
T Consensus 3 ~~~~t~GvE~E~~lVD~~t~~l~~~~--~~~l~~~~~~-----------------~~~~i~~El~~~qiEi~T~p~~~~~ 63 (371)
T PRK13515 3 APEFTLGIEEEYLLVDPETRDLRSYP--DALVEACRDT-----------------LGEQVKPEMHQSQVEVGTPVCATIA 63 (371)
T ss_pred CCCCcceEeEeEEEecCCcccccccH--HHHHHhchhh-----------------cCCccCcchhccEEEECCcccCCHH
Confidence 35679999999999999999998877 8888754221 134689994 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEEeeCCCCHH
Q 011314 150 QTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEA 229 (488)
Q Consensus 150 ~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~e~ 229 (488)
++.++|.+.++.+.+++++.|+.++++|+||+..+.+++++|++||+.|.+.+ |..++.|| +||+||||+|+|++
T Consensus 64 el~~~L~~~~~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~t~~~RY~~m~~~~---~~~~~~~~--~~g~HVhv~~~d~e 138 (371)
T PRK13515 64 EAREELGRLRQRVAQLAAQFGLRIIAAGTHPFADWRRQEITPKERYAQLVEDL---QDVARRNL--ICGLHVHVGIPDRE 138 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCccCCCCCchHHHHHHHHH---HHHHHhhc--eeeeEEEeCCCCHH
Confidence 99999999999999999999999999999999999899999999999999988 55688999 99999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCChhhHHHHHHHHhcccceeEeec
Q 011314 230 DMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRK 309 (488)
Q Consensus 230 d~i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~F~~~~~fe~y~~~ll~~p~~~v~r~ 309 (488)
++++++|.++.++|+++|||||||||+|++|||+|+|+.+|+.++ |+|+ |+.|.++++|++|++.++++
T Consensus 139 ~~~~~~n~~~~~lP~llALsanSPf~~G~dtg~~S~R~~~~~~~p--~~g~-p~~~~~~~~y~~~~~~l~~~-------- 207 (371)
T PRK13515 139 DRIDLMNQVRYFLPHLLALSTSSPFWGGRDTGLKSYRSAVFDEFP--RTGL-PPAFPSWAEYQRYVALLVKT-------- 207 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCCCCchhhhHHHHHhhCC--CCCC-CCCCCCHHHHHHHHHHHHhc--------
Confidence 999999999999999999999999999999999999999999997 8885 77799999999999999987
Q ss_pred CceecCCCCcHHHhhhCCCCCCCCCCCChhhhhhccCCCCCcccccceeeeecCCCCc-hHHHhHHHHHHHHhhhchh--
Q 011314 310 KKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGP-WRRLCALPAFWVGLLYDED-- 386 (488)
Q Consensus 310 g~~i~~~~~~~~d~~~~~~~~~~g~rPt~~d~~~hlst~fp~VR~k~~IEiR~~D~~p-~~~~~A~aAl~~GLl~~~~-- 386 (488)
| .+...++.||+. ||+ .|++| ||||+||++| .+++++++||++||+....
T Consensus 208 g-~i~~~~~~~~~v-----------Rp~-----~~~~t----------iEiRv~D~~p~~~~~~a~aal~~~lv~~l~~~ 260 (371)
T PRK13515 208 G-CIDDAKKIWWDL-----------RPS-----PRFPT----------LELRICDVCTRLDDALALAALFQALVRKLYRL 260 (371)
T ss_pred C-CcCCCCeEEEEe-----------ccC-----CCCCC----------eeEecCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 3 455556666666 665 44444 9999999999 8999999999999985542
Q ss_pred -hccchhhcCCcccHHHHHHHHhhhcccCCCCccCC------ccHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHc
Q 011314 387 -SLQNVLDMTADWTTGERQMLRNKVPKTGLKTPFRD------GLLRHVAQDVLKLSKDGLERRGFKETGFLNEVAEVVRT 459 (488)
Q Consensus 387 -~~~~~~~~~~~~~~~~~~~lr~~aar~Gl~a~~~~------~~l~~~~~~LL~~a~~gL~~~G~~e~~~L~~l~~~l~~ 459 (488)
..+..+...+.+...+|+| +|+|+|+++.+.+ .++++++++||+.++++|+++|+.+ .++.+.+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~n~w---~Aar~Glda~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~~g~~~--~~~~~~~i~~~ 335 (371)
T PRK13515 261 RRQNLTFRVYRRALIEENKW---RAQRYGLDGKLIDFGKQEEVPARELLEELLEFVDDVADALGSRR--EVEYARTILEE 335 (371)
T ss_pred HhcCCCCCcccHHHHHHHHH---HHHhhCCCceeecCCCCcEEEHHHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHc
Confidence 2234555667788889988 8999999988653 3899999999999999999999865 48899999999
Q ss_pred CCCHHHHHHHHHc---CChhhhHHHHHHhhc
Q 011314 460 GVTPAEKLLDMYH---GKWRESVDPVFEELL 487 (488)
Q Consensus 460 g~t~A~~~l~~~~---~~~~~~v~~~~~e~~ 487 (488)
| |+|+||++.|+ +++.+||+.+.+++.
T Consensus 336 g-~~A~rqr~~~~~~~~~l~~vv~~~~~~~~ 365 (371)
T PRK13515 336 G-TSADRQLRVYAETGGALRAVVDWLIEETL 365 (371)
T ss_pred C-CHHHHHHHHHHhccCCHHHHHHHHHHHHh
Confidence 8 99999999995 689999999998863
No 9
>TIGR02048 gshA_cyano glutamate--cysteine ligase, cyanobacterial, putative. This family consists of proteins believed (see Copley SD, Dhillon JK, 2002) to be the glutamate--cysteine ligases of several cyanobacteria, which are known to make glutathione.
Probab=100.00 E-value=4.3e-57 Score=467.29 Aligned_cols=335 Identities=17% Similarity=0.200 Sum_probs=291.5
Q ss_pred eeEEEeccccccCCCCCCCChhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCCHHHHHH
Q 011314 75 RIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQTCA 153 (488)
Q Consensus 75 ~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~l~~~~~ 153 (488)
++|||+|++++|+ |+.+++.+ .++|..+. .++.| ..+|||++|+||.++.++.+
T Consensus 2 ~~GvEeE~~l~d~-t~~l~~~a--~~vl~~~~----------------------~~~~El~~~~IE~~T~~~~~~~el~~ 56 (376)
T TIGR02048 2 TKGFEVEIYTGKP-TGEIVGLS--DRIVRDLS----------------------GFVREPDSRNVEYTTPPLNSYDRLLC 56 (376)
T ss_pred CccEEEEEEEECC-CcCccccH--HHHHHhcc----------------------CCccchhhcEEEecCCCcCCHHHHHH
Confidence 7899999999998 99999888 88887642 23346 47899999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCC-EEEeccCCCCCCC-CCCCCCCchHHHHHHHhcccccchhhhhhcccceeEEeeCCCCHHHH
Q 011314 154 EVNSHLYQVKAVAEEMGI-GFLGIGFQPKWGL-KDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADM 231 (488)
Q Consensus 154 el~~~l~~l~~~a~~~g~-~ll~~G~~P~~~~-~~~~~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~e~d~ 231 (488)
+|.+.++.+.++|+++|+ .|++.|+||+..| ..++++|++||+.|.+. .+|.+++ +||+||||+++|.+++
T Consensus 57 ~L~~~r~~l~~~a~~~g~~~l~a~gthP~~~~~~~~~~t~~~rY~~~~~~-----~~~~~~~--i~G~HVHVgv~d~d~a 129 (376)
T TIGR02048 57 GLLRPRRQLRHYLSQLGDYTLIPGSTLSLGGTDRFYRSDPQNPYHTYIEQ-----TYGTQVV--TASVHINIGIPDPEEL 129 (376)
T ss_pred HHHHHHHHHHHHHHHcCCCeeeecccCCCCCCCccCcCCCcchHHHHHHH-----Hhhhhhe--eeEEEEEcCCCCHHHH
Confidence 999999999999999999 7999999999999 67789999999999654 2356666 9999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCChhhHHHHHHHHhcccceeEeecCc
Q 011314 232 IRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKK 311 (488)
Q Consensus 232 i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~F~~~~~fe~y~~~ll~~p~~~v~r~g~ 311 (488)
+..+|.++.++|+++|||||||||+|++|||+|+|..+|+++| + +|+.|.+|.+|++|++.++++ +
T Consensus 130 v~v~n~lr~~LP~LlALSAsSPf~~G~dTG~aS~R~~~~~~~P---~--~pP~f~~~~~y~~~~~~li~~---------G 195 (376)
T TIGR02048 130 MRACRLVRMEAPLFLALSASSPFLDGQVTGYHSTRWQMFPKTP---Q--EVPLFTSHAHFIEWTEEQLTL---------G 195 (376)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCcchhhHHHHHHHhCC---C--CCCCcCCHHHHHHHHHHHHHc---------C
Confidence 9999999999999999999999999999999999999999998 3 566899999999999999987 4
Q ss_pred eecCCCCcHHHhhhCCCCCCCCCCCChhhhhhc-----cCCCCCcccccceeeeecCCCCc-hHHHhHHHHHHHHhhhch
Q 011314 312 YIDCAGMSFRDFLAGKLPCLPGELPTLNDWENH-----LTTIFPEVRLKRYLEMRGADGGP-WRRLCALPAFWVGLLYDE 385 (488)
Q Consensus 312 ~i~~~~~~~~d~~~~~~~~~~g~rPt~~d~~~h-----lst~fp~VR~k~~IEiR~~D~~p-~~~~~A~aAl~~GLl~~~ 385 (488)
.+...++.|||. ||+ .| ++| ||||+||+|+ .+++++++||+++|+...
T Consensus 196 ~i~d~~~~wwdv-----------RPs-----~~~~~~~~~T----------lEiRV~D~~~~~~~~~aiaalv~aLv~~~ 249 (376)
T TIGR02048 196 TMQNVRHLWSAV-----------RPN-----GDRRPYDLNR----------LELRICDLVTDPISLLAITALLEARLLQL 249 (376)
T ss_pred CccccCeeEEec-----------CCC-----CCCCcCCCCC----------EEEEeccCcCCHHHHHHHHHHHHHHHHHH
Confidence 677788899998 777 44 666 9999999999 899999999999987443
Q ss_pred -hhcc---chhhcCCc----ccHHHHHHHHhhhcccCCCCccCC------ccHHHHHHHHHHHHHHHHHhcCCchhhhHH
Q 011314 386 -DSLQ---NVLDMTAD----WTTGERQMLRNKVPKTGLKTPFRD------GLLRHVAQDVLKLSKDGLERRGFKETGFLN 451 (488)
Q Consensus 386 -~~~~---~~~~~~~~----~~~~~~~~lr~~aar~Gl~a~~~~------~~l~~~~~~LL~~a~~gL~~~G~~e~~~L~ 451 (488)
.+.. .....+.. +...+|.| +|+|+|+++.+.+ .++++++.+|++..++.+++.|+.+ ++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~l~~ll~~n~w---rAaR~Gl~g~lid~~~~~~~pa~~~l~~Lle~v~p~~~~~g~~~--~l~ 324 (376)
T TIGR02048 250 LADPDLDPLQQSQLTPEELLALADQNEI---SAAVSSLDATLTHWRDGRAIAAREWIEELYQEVWLIAKYQGFSC--FLP 324 (376)
T ss_pred HhccccCCcccCCCChhHHHHHHHHHHH---HHHhhCCCceEEecCCCCEeEHHHHHHHHHHHHHHHHHHcCCHH--HHH
Confidence 2212 22233444 66788888 7999999977643 4899999999999999999999865 588
Q ss_pred HHHHHHHcCCCHHHHHHHHHc--CChhhhHHHHHHhhc
Q 011314 452 EVAEVVRTGVTPAEKLLDMYH--GKWRESVDPVFEELL 487 (488)
Q Consensus 452 ~l~~~l~~g~t~A~~~l~~~~--~~~~~~v~~~~~e~~ 487 (488)
.+.+++++| |+|+||++.|+ |++.+||+.+.+++.
T Consensus 325 ~l~~il~~G-~~A~Rqr~~~~~~g~l~~Vv~~l~~~t~ 361 (376)
T TIGR02048 325 PLRKILREG-NQAQQWLTQYEQGKTPQTIVQQAILQTE 361 (376)
T ss_pred HHHHHHHhC-CHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 999999999 99999999994 589999999998873
No 10
>TIGR02050 gshA_cyan_rel uncharacterized enzyme. This family represents a division of a larger family, the other branch of which is predicted to act as glutamate--cysteine ligase (the first of two enzymes in glutathione biosynthesis) in the cyanobacteria. Species containing this protein, however, are generally not believe to make glutathione, and the function is unknown.
Probab=100.00 E-value=3.3e-57 Score=454.73 Aligned_cols=280 Identities=23% Similarity=0.276 Sum_probs=244.7
Q ss_pred eeEEEeccccccCCCCCCCChhHHH-HHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCCHHHHH
Q 011314 75 RIGTEHEKFGFEFGTLHPMKYEQIA-ELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQTC 152 (488)
Q Consensus 75 ~iGvE~E~~~vd~~t~~~~~~~~i~-~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~l~~~~ 152 (488)
++|+|+|+++||+.|+.+++.+ . ++|..+.+.. +..|+.| ..+|||++|+||.++.++.
T Consensus 1 t~GvE~E~~lvD~~t~~~~~~~--~~~~l~~~~~~~-----------------~~~~~~El~~~qiEi~t~p~~~~~~l~ 61 (287)
T TIGR02050 1 TLGVEEELLLVDPHTYDLAASA--SAVLIGACREKI-----------------GAGFKHELFESQVELATPVCTTLAEAA 61 (287)
T ss_pred CceeeeeeeeEcCCccCcCccC--hHHHHHhhhhhc-----------------ccccChhhhccEEEecCCCcCCHHHHH
Confidence 6899999999999999988776 6 7777654321 1248889 4899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEEeeCCCCHHHHH
Q 011314 153 AEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMI 232 (488)
Q Consensus 153 ~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~e~d~i 232 (488)
++|.+.++.++++|+++|+.+++.|+||+..+.+++++||+||+.|.+++ |..+++|| +||+||||+++|+++++
T Consensus 62 ~~l~~~~~~l~~~a~~~g~~l~~~G~hP~~~~~~~~~~~~~RY~~m~~~~---g~~~~~~~--~~g~hVhv~v~d~~~~i 136 (287)
T TIGR02050 62 AQIRAVRARLVQAASDHGLRICGAGTHPFARWRRQEVADNPRYQRLLERY---GYVARQQL--VFGLHVHVGVPSPDDAV 136 (287)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCccCCCCcHHHHHHHHHHH---HHHHHhHc--eeeEEEEeCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999988 67799999 99999999999999999
Q ss_pred HHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCChhhHHHHHHHHhcccceeEeecCce
Q 011314 233 RKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKY 312 (488)
Q Consensus 233 ~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~F~~~~~fe~y~~~ll~~p~~~v~r~g~~ 312 (488)
+++|.++.++|+++|||||||||+|++|||+|+|+.+|+++| ++| +|+.|+++++|++|++.+++++ .
T Consensus 137 ~~~n~l~~~lP~llALsANSPf~~G~dtg~~s~R~~i~~~~p--~~G-~p~~f~~~~~y~~~~~~l~~~g---------~ 204 (287)
T TIGR02050 137 AVLNRLLPWLPHLLALSASSPFWQGFDTGYASYRRNIFQAWP--TAG-LPPAFGSWDAFEAYFADLLETG---------V 204 (287)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccCcCCchHHHHHHHHHhCC--CCC-CCCcCCCHHHHHHHHHHHHHcC---------C
Confidence 999999999999999999999999999999999999999998 788 5778999999999999999873 3
Q ss_pred ecCCCCcHHHhhhCCCCCCCCCCCChhhhhhccCCCCCcccccceeeeecCCCCc-hHHHhHHHHHHHHhhhchhhc---
Q 011314 313 IDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGP-WRRLCALPAFWVGLLYDEDSL--- 388 (488)
Q Consensus 313 i~~~~~~~~d~~~~~~~~~~g~rPt~~d~~~hlst~fp~VR~k~~IEiR~~D~~p-~~~~~A~aAl~~GLl~~~~~~--- 388 (488)
|...++.|||+ ||+ .|++ +||+|+||+|| ++++++++||++||+......
T Consensus 205 i~~~~~iww~v-----------Rp~-----~~~~----------tvE~Rv~D~~~~~~~~~~~aal~~~Lv~~~~~~~~~ 258 (287)
T TIGR02050 205 IDDDGDLWWDI-----------RPS-----PHFG----------TVEVRVADTCLNLEHAVAIAALIRALVEWLLREWPA 258 (287)
T ss_pred cCCCCeeEEEe-----------ccC-----CCCC----------CeeEEcCCCCCCHHHHHHHHHHHHHHHHHHHHhHhc
Confidence 44445555555 554 3444 49999999999 899999999999998665432
Q ss_pred cchhhcCCcccHHHHHHHHhhhcccCCCCcc
Q 011314 389 QNVLDMTADWTTGERQMLRNKVPKTGLKTPF 419 (488)
Q Consensus 389 ~~~~~~~~~~~~~~~~~lr~~aar~Gl~a~~ 419 (488)
.......+.+..++|+| +|+|+||++.+
T Consensus 259 ~~~~~~~~~~~~~~n~w---rAaR~Gl~~~l 286 (287)
T TIGR02050 259 PFPVPELDYWLLQENKW---RAARYGLDAEI 286 (287)
T ss_pred CCCCCCCCHHHHHHHHH---HHHhhCCCCcc
Confidence 23445667788999999 89999999864
No 11
>COG2170 Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=2e-55 Score=435.75 Aligned_cols=348 Identities=22% Similarity=0.276 Sum_probs=307.8
Q ss_pred CCeeEEEeccccccCCCCCCCChhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCCHHHH
Q 011314 73 KWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQT 151 (488)
Q Consensus 73 ~~~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~l~~~ 151 (488)
..++|||+|+++||+.+...+.-+ ..+++.++... -...|+.| ..+++|+.|+.|.+++++
T Consensus 2 ~ltlGvE~E~~lvd~~g~dl~~~s--~~ii~~~~~~~----------------~~~~~~~e~~e~~vE~~t~vc~~~~eA 63 (369)
T COG2170 2 RLTLGVELEFQLVDPQGYDLVGSS--DAIIEALKGKV----------------TAGHLKHEITESTVELATGVCRLLAEA 63 (369)
T ss_pred CcccceEEEEEecCCCCccccccc--HHHHHhcCCCC----------------CCcchhHHHHHHhhcccchhhhhHHHH
Confidence 468999999999999877777777 78887764421 12356667 678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEEeeCCCCHHHH
Q 011314 152 CAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADM 231 (488)
Q Consensus 152 ~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~e~d~ 231 (488)
..++.+.++.+.+++.++|+++++.|+|||.+|...++.+++||+.+.+.+ |++|++|. +||+||||+++|.+|+
T Consensus 64 ~~~~r~~r~~l~q~a~d~gL~~~~~GtHPfadw~~~~~~~~prY~~~ie~~---~y~~~q~~--v~G~HVHVGi~~~d~~ 138 (369)
T COG2170 64 AAQLRALRDYLVQAASDHGLRICGGGTHPFADWRRQEVPDNPRYQRLIERT---GYLGRQMT--VAGQHVHVGIPSPDDA 138 (369)
T ss_pred HHHHHHHHHHHHHHhhhcCceecccCCCchhhhhhccCCCChhHHHHHHHh---hhHHhhee--eeeEEEEecCCCHHHH
Confidence 999999999999999999999999999999999999999999999999888 78899999 9999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCChhhHHHHHHHHhcccceeEeecCc
Q 011314 232 IRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKK 311 (488)
Q Consensus 232 i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~F~~~~~fe~y~~~ll~~p~~~v~r~g~ 311 (488)
+..+|.++.+.|+++|||||||||.|++|||+|+|..+|.++| +.| +|+.|.+|..|+.|++.++.+ +
T Consensus 139 ~~~l~~l~~~~PhlLALSASSPf~~G~dTGyAS~R~~if~~~P--~~g-~pp~f~sw~~f~~~~~~~~~t---------G 206 (369)
T COG2170 139 MYLLHRLLRYVPHLLALSASSPFWQGTDTGYASARANIFSQLP--TNG-LPPAFQSWAAFEAFFRDQLET---------G 206 (369)
T ss_pred HHHHHHHHhhhhHHHhhhcCCccccCccchhhhhhHhhhhhCC--cCC-CCccccCHHHHHHHHHHHHHh---------c
Confidence 9999999999999999999999999999999999999999998 666 566899999999999999988 5
Q ss_pred eecCCCCcHHHhhhCCCCCCCCCCCChhhhhhccCCCCCcccccceeeeecCCCCc-hHHHhHHHHHHHHhhhchhhccc
Q 011314 312 YIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGP-WRRLCALPAFWVGLLYDEDSLQN 390 (488)
Q Consensus 312 ~i~~~~~~~~d~~~~~~~~~~g~rPt~~d~~~hlst~fp~VR~k~~IEiR~~D~~p-~~~~~A~aAl~~GLl~~~~~~~~ 390 (488)
.|+..+..|||+ ||+ +|++| ||+|+||+++ +..+.|++||+.+|+........
T Consensus 207 ~I~~~~~lwwdI-----------RPs-----ph~gT----------lEvRi~D~~~~l~~~~aivaL~~Alv~~ll~~~d 260 (369)
T COG2170 207 TIDSMGDLWWDI-----------RPS-----PHLGT----------LEVRICDTVLNLAELLAIVALIHALVVWLLRRRD 260 (369)
T ss_pred ccccccceEEec-----------ccC-----CCCCc----------eEEEecCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 789999999999 998 89988 9999999999 89999999999999866544222
Q ss_pred h---hhcCCcccHHHHHHHHhhhcccCCCCccCC------ccHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHcCC
Q 011314 391 V---LDMTADWTTGERQMLRNKVPKTGLKTPFRD------GLLRHVAQDVLKLSKDGLERRGFKETGFLNEVAEVVRTGV 461 (488)
Q Consensus 391 ~---~~~~~~~~~~~~~~lr~~aar~Gl~a~~~~------~~l~~~~~~LL~~a~~gL~~~G~~e~~~L~~l~~~l~~g~ 461 (488)
+ .+....|..++|+| +|+|+||++.+.+ +.+++++.++++...+..+++|+.- +|+++.+++++|
T Consensus 261 ~~p~~p~~l~~~~~eN~w---qA~RyGlda~~~~~~dg~~~~~~d~~~~~~~~l~p~A~~lg~~~--~l~~l~~il~~g- 334 (369)
T COG2170 261 ADPTEPDYLLYLFDENKW---QAARYGLDAVITDPADGRRRALTDWLLRLLQRLAPSAKKLGCAC--ALEALRDILREG- 334 (369)
T ss_pred CCCCCchHHHHHHhhhHH---HHHHcccceEEeeccCCceehHHHHHHHHHHHHHHHHHhhcchh--HHHHHHHHHHhc-
Confidence 2 23334577889999 8999999987642 3789999999999999999999864 599999999999
Q ss_pred CHHHHHHHHHc---CChhhhHHHHHHhhc
Q 011314 462 TPAEKLLDMYH---GKWRESVDPVFEELL 487 (488)
Q Consensus 462 t~A~~~l~~~~---~~~~~~v~~~~~e~~ 487 (488)
+.+++|+..|+ |++...|+..++|++
T Consensus 335 ~~aqq~~R~~~~~~~~~~~~v~~~~~~l~ 363 (369)
T COG2170 335 SSAQQQLRVFKQHGGSLIAAVDRHCEELA 363 (369)
T ss_pred cHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 78889988884 678999998888764
No 12
>PF04107 GCS2: Glutamate-cysteine ligase family 2(GCS2); InterPro: IPR006336 Also known as gamma-glutamylcysteine synthetase and gamma-ECS (6.3.2.2 from EC). This enzyme catalyses the first and rate limiting step in de novo glutathione biosynthesis. Members of this family are found in archaea, bacteria and plants. May and Leaver [] discuss the possible evolutionary origins of glutamate-cysteine ligase enzymes in different organisms and suggest that it evolved independently in different eukaryotes, from an ancestral bacterial enzyme. They also state that Arabidopsis thaliana (Mouse-ear cress) gamma-glutamylcysteine synthetase is structurally unrelated to mammalian, yeast and Escherichia coli homologues. In plants, there are separate cytosolic and chloroplast forms of the enzyme.; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 1R8G_A 2GWC_E 2GWD_A 1TT4_B.
Probab=100.00 E-value=5.6e-53 Score=425.04 Aligned_cols=287 Identities=34% Similarity=0.498 Sum_probs=217.1
Q ss_pred eEEEeccccccCCCCCCCChhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCCHHHHHHH
Q 011314 76 IGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQTCAE 154 (488)
Q Consensus 76 iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~l~~~~~e 154 (488)
+|+|+|+++||+.|+.+. .+ . ..+++.++++..++ .+..| +++|||++|+||.++.++.++
T Consensus 1 ~GvE~E~~lvD~~~~~~~-~~--~--------------~~~~~~~~~~~~~~-~~~~E~~~~qvEi~t~p~~~~~el~~~ 62 (288)
T PF04107_consen 1 VGVEEEFQLVDPETRPLA-RA--P--------------ELEDEALIGLSPGG-RVVTELPQSQVEISTPPCRSLAELREE 62 (288)
T ss_dssp EEEEEEEEEECTTTCCCT--C--C--------------CHHCCCCCCESESS-EEEEESSTTEEEEE--SBSSHHHHHHH
T ss_pred CcEeEEEeeccCCCcccC-cc--H--------------HHHhhhhcccccCC-ceeeccCCCEEEEeCCCCCCHHHHHHH
Confidence 699999999999987655 22 1 11223334544334 56666 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEEeeCCCCHHHHHHH
Q 011314 155 VNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRK 234 (488)
Q Consensus 155 l~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~e~d~i~~ 234 (488)
|.+.++++.++++++|+.|+++|+||+..+.+.+++|++||+.|.++|+..|.++++||.++|++||+|+..++.+ +++
T Consensus 63 l~~~~~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~~~~RY~~~~~~~~~~g~~~~~~~~~g~hvhV~v~~~~e~~-v~~ 141 (288)
T PF04107_consen 63 LRALRRALADAAAELGLRLVAAGTHPFARWRDQPITPKPRYRAMAEYFGRRGVLARRMMTCGAHVHVGVDDGDEAA-VRV 141 (288)
T ss_dssp HHHHHHHHHHHHHCTTEEEE--SB-SS--GGGS---S-HHHHCHHHHHGGH-SGCCSHHBHEEEEEEEESSSHHHH-HHH
T ss_pred HHHHHHHHHHHHHHcCCEEEecCCCcCCCcccccCCCChhhhHHHHHHhhhhhhhhhhhhcccceEEeCCCccHHH-HHH
Confidence 9999999999999999999999999999999999999999999999998877789999966666666666655544 899
Q ss_pred HHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCCCCCCCCCCChhhHHHHHHHHhcccceeEeecCceec
Q 011314 235 FRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYID 314 (488)
Q Consensus 235 ~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~RtG~~P~~F~~~~~fe~y~~~ll~~p~~~v~r~g~~i~ 314 (488)
+|.++.++|+++|||||||||+|++|||+|+|+.+|+++| ++|++|..|+++++|++|+++++++|+|+..+
T Consensus 142 ~n~~~~~~P~llALsANSP~~~G~~tg~~s~R~~~~~~~p--~~~~~P~~~~~~~~~~~~~~~l~~~~~i~~~~------ 213 (288)
T PF04107_consen 142 MNALRPWLPVLLALSANSPFWEGRDTGYASYRSRIWERWP--RCGGVPPAFDDWADYEEYVEYLLDTGVIFDRR------ 213 (288)
T ss_dssp HHHHHTTHHHHHHHH--B-EETTEE-S-SBHGGGCCTTST--TECS-GGGSSHHHCHHHHHHHHTTSTTESSGG------
T ss_pred HHHHHHHhHHHHHHHcCCccccCCcCCCcCcHHHHHHhCC--CCCCCCCCCCchhHHHHHHHHHHhCCccccch------
Confidence 9999999999999999999999999999999999999999 47889999999999999999999998777543
Q ss_pred CCCCcHHHhhhCCCCCCCCCCCChhhhhhccCCCCCcccccceeeeecCCCCchHHHhHHHHHHHHhhhchhhccchhhc
Q 011314 315 CAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDM 394 (488)
Q Consensus 315 ~~~~~~~d~~~~~~~~~~g~rPt~~d~~~hlst~fp~VR~k~~IEiR~~D~~p~~~~~A~aAl~~GLl~~~~~~~~~~~~ 394 (488)
..|||..-. ...| ..||..|.+++||++|.++++|+|.+|+++.....+.++++.+.+++.
T Consensus 214 ---~~~~~~r~~------~~~~-t~E~r~~d~~~~p~~~~~~~~~~r~~~a~~~~~~~~~~~~~~~~~~~~--------- 274 (288)
T PF04107_consen 214 ---MIWWDVRPS------PRFP-TVELRVHDSTLFPPVRLRAVLEARLLDALPAPRLDAAPAFPPGPLYRD--------- 274 (288)
T ss_dssp ---GHHBSEEEE------TTTT-EEEEEEEETT-EESSHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGCC---------
T ss_pred ---hhHhhcCCC------CCCC-hhHHHhhcCCCcHHHHHHHHHHHHHHHhchHhhhccccccCCccchHH---------
Confidence 567766211 1123 467778888888888888888888888887767777777777766552
Q ss_pred CCcccHHHHHHHHhhhcccCC
Q 011314 395 TADWTTGERQMLRNKVPKTGL 415 (488)
Q Consensus 395 ~~~~~~~~~~~lr~~aar~Gl 415 (488)
...+|.| +|+|+||
T Consensus 275 ----~~~e~~w---~A~r~gl 288 (288)
T PF04107_consen 275 ----LARENKW---RAARYGL 288 (288)
T ss_dssp ----HHHHHHH---HHHHCCC
T ss_pred ----HHHHHHH---HHhccCC
Confidence 2457788 8999997
No 13
>PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional
Probab=99.95 E-value=8.5e-27 Score=260.56 Aligned_cols=329 Identities=14% Similarity=0.116 Sum_probs=232.1
Q ss_pred CCeeEEEeccccccCCCCCCCC--hhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCCHH
Q 011314 73 KWRIGTEHEKFGFEFGTLHPMK--YEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLH 149 (488)
Q Consensus 73 ~~~iGvE~E~~~vd~~t~~~~~--~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~l~ 149 (488)
..++|||.|.+.||++ |+.+. .. ++|. ++ .....|+.| ..+|+|+.|+||.++.
T Consensus 18 ~~~~GiE~E~lrVd~~-g~la~t~~p---~~lg---~~----------------~~~~~ittdfsesqlE~iTp~~~~~~ 74 (752)
T PRK02471 18 QANFGLEKESLRVDSD-GKLALTPHP---KAFG---SR----------------SFHPYIQTDFSESQLELITPVADSIE 74 (752)
T ss_pred cCCcceEeeeeEECCC-CCCCCCCCc---hhhh---cc----------------hhCCCcCchhHHHHHHhcCCCCCCHH
Confidence 4599999999999997 87653 32 3332 11 012468888 5799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCC-CCCCC-----CCchHHHH-HHHhcccccchhhhhhcccceeEEe
Q 011314 150 QTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL-KDIPV-----MPKGRYEI-MRNYMPKVGSLGLDMMFRTCTVQVN 222 (488)
Q Consensus 150 ~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~-~~~~~-----~pk~RY~~-m~~~~~~~g~~g~~mm~~t~s~QVh 222 (488)
++.++|....+.+...+ +.|..|++.|++|+.++ .++|+ .+|.||+. |.+.| | .+.++ +||+|||
T Consensus 75 ~~~~~L~~l~~~~~~~~-~~~e~lwp~smpp~~~~~~~i~iA~~~~~~~~~Yr~~L~~ry---g--~~~q~--i~GiHvn 146 (752)
T PRK02471 75 EVYRFLGALHDVASRSL-DEDEYLWPLSMPPILPDEEEIPIAQLDNREDVQYREYLAKKY---G--KKKQM--ISGIHYN 146 (752)
T ss_pred HHHHHHHHHHHHHHHhh-cCCCcccccCCCCCCCccccCcccccCCcchHHHHHHHHHHh---C--hhhcc--cCeEEEE
Confidence 99999999999999999 88999999999999887 57799 99999999 88888 3 23445 9999999
Q ss_pred eCCCCH------------HHHHHHHHH--------hhhhhHHHHHHhhCCCCCC---------CCCCCCccccHHHHhcC
Q 011314 223 LDFSSE------------ADMIRKFRA--------GLALQPIATALFANSPFTE---------GKPNGYLSMRSHIWTDT 273 (488)
Q Consensus 223 ld~~~e------------~d~i~~~n~--------~~~l~P~l~AL~ANSPf~~---------G~~tg~~s~R~~iw~~~ 273 (488)
+++++. ++.+...|. ...+..++++||+|||||+ |.++|+.|+|+..|..+
T Consensus 147 ~s~~d~~~~~l~~~~~~~~~~~~~~n~~Y~~l~rnf~r~~WLl~yL~gaSP~~~~sf~~~~~~~~~~~~~S~R~s~~g~~ 226 (752)
T PRK02471 147 FSLGEALIQRLFEEQSEQQDYKDFKNDLYLKVARNFLRYRWLLTYLFGASPVAEADFFKQNKEYLNQDVRSLRNSKYGYV 226 (752)
T ss_pred eccCHHHHHHHHHhccccchHHHHHhHHHHHHHHhhHHHHHHHHHHhcCCccchhhhccCCcccCCCCceeeeccccCCC
Confidence 999987 555666654 1234455999999999999 99999999999999999
Q ss_pred CCCCCCCCCCCCCChhhHHHHHHHHhcccceeEeecCceecCCCCcHHHhhhCCCCCCCCCCCCh----hhhhhccCCCC
Q 011314 274 DNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTL----NDWENHLTTIF 349 (488)
Q Consensus 274 ~~~RtG~~P~~F~~~~~fe~y~~~ll~~p~~~v~r~g~~i~~~~~~~~d~~~~~~~~~~g~rPt~----~d~~~hlst~f 349 (488)
+ ++| +|..|.++.+|.++++.++++ | .+...+..||++ ||+. +++..+
T Consensus 227 ~--~~~-~~~~~~s~~~Y~~~l~~~i~~--------g-~l~~~~e~y~~i-----------Rpk~~~~~~~l~~~----- 278 (752)
T PRK02471 227 N--KED-VYVSYNSLEDYVSSLENAVES--------G-QLISEKEFYSPV-----------RLRGAKQDRSLLEK----- 278 (752)
T ss_pred C--CCC-CCCCcCCHHHHHHHHHHHHHc--------C-Cccccccceecc-----------CCCCCCchHHHHhc-----
Confidence 8 566 577899999999999998876 3 566667777776 5540 111110
Q ss_pred CcccccceeeeecCCCCch-HHHhHHH--HHHHHhhhchhhccchhhcCCcccH--HHHHHHHhhhcccCCCCccCCccH
Q 011314 350 PEVRLKRYLEMRGADGGPW-RRLCALP--AFWVGLLYDEDSLQNVLDMTADWTT--GERQMLRNKVPKTGLKTPFRDGLL 424 (488)
Q Consensus 350 p~VR~k~~IEiR~~D~~p~-~~~~A~a--Al~~GLl~~~~~~~~~~~~~~~~~~--~~~~~lr~~aar~Gl~a~~~~~~l 424 (488)
=-+|||+|++|.+|. ..-+... -|+.-++-...-.+. .+....+.. .+|+. +++..|-. ...++
T Consensus 279 ----Gv~yiEvR~~D~~p~~~~GI~~~~~~Fl~lfl~~~ll~~~-~~~~~~~~~~~~~n~~---~va~~g~~---~~~~~ 347 (752)
T PRK02471 279 ----GITYLEFRLFDLNPFEPYGISQETLDFVHLFLLYLLWLDE-PEDTDQWVELADENNN---LIALEHPL---EALAL 347 (752)
T ss_pred ----CCCEEEEecccCCCCCccCCCHHHHHHHHHHHHHHhcCCC-CcCCHHHHHHHHHHHH---HHHhhCCC---CCccH
Confidence 014699999999993 4333322 243333211110111 111111111 12222 56666721 23578
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhhhHHHHH----HHHHcCCCHHHHHHHHHc
Q 011314 425 RHVAQDVLKLSKDGLERRGFKETGFLNEVA----EVVRTGVTPAEKLLDMYH 472 (488)
Q Consensus 425 ~~~~~~LL~~a~~gL~~~G~~e~~~L~~l~----~~l~~g~t~A~~~l~~~~ 472 (488)
++++.++++..++-++.++... .|...+. ++.....||+.++++...
T Consensus 348 ~~~a~~~l~~l~~~~~~l~~~~-~y~~~~~~~~~~~~~p~~t~s~~~~~~~~ 398 (752)
T PRK02471 348 AAEAELILDAMEDLVQHLGLPD-EYQDLIKQLKEQLTDPEKTLSGRLLKQIK 398 (752)
T ss_pred HHHHHHHHHHHHHHHHHhCCch-HHHHHHHHHHHHhcCcccCHHHHHHHHHH
Confidence 9999999999999888887653 2444443 333455789988887664
No 14
>PRK02107 glutamate--cysteine ligase; Provisional
Probab=98.97 E-value=1.2e-07 Score=101.92 Aligned_cols=152 Identities=15% Similarity=0.084 Sum_probs=96.6
Q ss_pred CCeeEEEeccccccCCCCC--CCChhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCCHH
Q 011314 73 KWRIGTEHEKFGFEFGTLH--PMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLH 149 (488)
Q Consensus 73 ~~~iGvE~E~~~vd~~t~~--~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~l~ 149 (488)
..+.|||-|-.-|+.+ |+ ..|.. ..+= + ...-..||-+ -.+|+|+.|+|+.++.
T Consensus 20 ~~~~GIErE~lRV~~~-G~La~tpHP--~~lG----s----------------~lthp~ITTDfSEs~lE~ITP~~~s~~ 76 (523)
T PRK02107 20 GILRGIERETLRVTAD-GHLATTPHP--EALG----S----------------ALTHKWITTDYSEALLEFITPVDGDID 76 (523)
T ss_pred hCCcceeeeeeeeCCC-CCccCCCCC--hhhC----C----------------cccCCCCCCcccHHHHHhcCCCCCCHH
Confidence 4589999999999986 54 22322 1111 1 1112356666 3689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCC-CCCCC-----C----chHHHHHHHhcccccchhhhhhccccee
Q 011314 150 QTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPVM-----P----KGRYEIMRNYMPKVGSLGLDMMFRTCTV 219 (488)
Q Consensus 150 ~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~-~~~~~-----p----k~RY~~m~~~~~~~g~~g~~mm~~t~s~ 219 (488)
++.+.|...-+.+..-+ -+=.|++..+.|..+-+ ++|+- . |..|+. .+. ..+|+.| -.++|+
T Consensus 77 ~~l~~L~~lh~~v~~~L--~dE~LWP~SMP~~l~~d~~IpIA~YG~sn~g~~k~~YR~---gL~--~rYG~~m-Q~IsGI 148 (523)
T PRK02107 77 HLLTFLRDLHRFTARKL--GDERLWPLSMPCYLPAEQDIPIAQYGTSNIGRLKTLYRE---GLK--NRYGALM-QTISGV 148 (523)
T ss_pred HHHHHHHHHHHHHHHhC--CCCccCCCCCCCCCCCcccceecccCccccchhHHHHHH---HHH--HHhChhh-hccceE
Confidence 99987777666665555 35678888888886632 44441 1 222322 121 1236554 449999
Q ss_pred EEeeCCCC--------------HHHHH-----HHHHHhhhhhHHHHHHhhCCCCC
Q 011314 220 QVNLDFSS--------------EADMI-----RKFRAGLALQPIATALFANSPFT 255 (488)
Q Consensus 220 QVhld~~~--------------e~d~i-----~~~n~~~~l~P~l~AL~ANSPf~ 255 (488)
|+|+.+++ -.+++ ...|-.+.+..+++.||..||..
T Consensus 149 HyNfSl~~~~~~~l~~~~~~~~~~~f~s~~Y~~liRNf~Ry~WLl~YLfGASPa~ 203 (523)
T PRK02107 149 HYNFSLPEEFWQALCGEGSEASAKDFISEGYFALIRNYYRFGWVLPYLFGASPAL 203 (523)
T ss_pred EeecCCCHHHHHHHHhccccccHHHHHhHHHHHHHHHHHHHhHHHHHHccCChhh
Confidence 99999972 11222 33344556789999999999953
No 15
>TIGR01434 glu_cys_ligase glutamate--cysteine ligase. serve to protect against oxidative damage and participate in a biosynthetic or detoxification reactions.
Probab=98.85 E-value=5.6e-07 Score=96.76 Aligned_cols=151 Identities=14% Similarity=0.065 Sum_probs=93.6
Q ss_pred CeeEEEeccccccCCCCC--CCChhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCCHHH
Q 011314 74 WRIGTEHEKFGFEFGTLH--PMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQ 150 (488)
Q Consensus 74 ~~iGvE~E~~~vd~~t~~--~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~l~~ 150 (488)
...|+|-|-.-|+.+ |+ ..|.. ..+= + ...-..||-+ -.+|+|+.|+|+.++.+
T Consensus 17 ~~~GIErE~lRV~~~-G~La~tpHP--~~lG----s----------------~lthp~ITTDfSEs~lE~ITP~~~s~~~ 73 (512)
T TIGR01434 17 IQRGIERETLRVNAD-GTLATTGHP--EALG----S----------------ALTHKWITTDFSEALLEFITPTDGDIAH 73 (512)
T ss_pred cccCeeeeeeeeCCC-CCccCCCCC--hhhC----C----------------cccCCCCCCcccHHHHHhcCCCCCCHHH
Confidence 456999999999986 54 22322 1111 1 1112356666 36899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCC-CCCCC-----C----chHHHHHHHhcccccchhhhhhcccceeE
Q 011314 151 TCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPVM-----P----KGRYEIMRNYMPKVGSLGLDMMFRTCTVQ 220 (488)
Q Consensus 151 ~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~-~~~~~-----p----k~RY~~m~~~~~~~g~~g~~mm~~t~s~Q 220 (488)
+.+.|...-+.+..-+ -+=.|++..+.|..+-+ ++|+- . |.-|+. .+. ..+|+.| -.++|+|
T Consensus 74 ~l~~L~~lh~~~~~~l--~~E~LWP~SMP~~l~~d~~IpIA~yG~sn~g~~k~~YR~---gL~--~RYG~~m-Q~IsGIH 145 (512)
T TIGR01434 74 MLTFLRDLHRFTASKL--GDERMWPLSMPCYIADGQDIEIAQYGTSNIGRFKTLYRE---GLK--NRYGALM-QTISGIH 145 (512)
T ss_pred HHHHHHHHHHHHHhcC--CCCccCCCCCCCCCCCccccceeecCccccchhHHHHHH---HHH--HHhChhh-hccceEE
Confidence 9887776555554433 34568888888876632 44442 1 222322 111 1235544 3499999
Q ss_pred EeeCCCCH--------------HHHH-----HHHHHhhhhhHHHHHHhhCCCCC
Q 011314 221 VNLDFSSE--------------ADMI-----RKFRAGLALQPIATALFANSPFT 255 (488)
Q Consensus 221 Vhld~~~e--------------~d~i-----~~~n~~~~l~P~l~AL~ANSPf~ 255 (488)
+|+.++++ .+++ ...|-...+..+++.||..||..
T Consensus 146 yNfSl~~~~~~~l~~~~~~~~~~~f~~~~Y~~LiRNf~Ry~WLl~YLfGASPa~ 199 (512)
T TIGR01434 146 YNFSLPMAFWQAKRGAEGGESAKDKISAGYFRLIRNYYRFGWVIPYLFGASPAI 199 (512)
T ss_pred eecCCCHHHHHHHHHhcccchHHHHHhHHHHHHHHHHHHHhHHHHHHccCChhh
Confidence 99999731 1222 23344556789999999999953
No 16
>TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type. gamma-glutamyltripeptides of the form gamma-Glu-Cys-X(aa). The N-terminal region is similar to proteobacterial glutamate-cysteine ligase. The C-terminal region is homologous to cyanophycin synthetase of cyanobacteria and, more distantly, to D-alanine-D-alanine ligases. Members of this family are found in Listeria and Enterococcus, Gram-positive lineages in which glutathione is produced (see PUBMED:8606174), and in Pasteurella multocida, a Proteobacterium. In Clostridium acetobutylicum, adjacent genes include separate proteins rather than a fusion protein.
Probab=98.60 E-value=2.4e-06 Score=95.87 Aligned_cols=152 Identities=16% Similarity=0.133 Sum_probs=89.1
Q ss_pred CeeEEEeccccccCCCCC--CCChhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCCHHH
Q 011314 74 WRIGTEHEKFGFEFGTLH--PMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQ 150 (488)
Q Consensus 74 ~~iGvE~E~~~vd~~t~~--~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~l~~ 150 (488)
.++|+|-|..-|+.+ |+ ..|+. ..+= + +..-..|+-. -.+|+|+.|+|+.++.
T Consensus 8 ~~~GiE~E~lRv~~~-G~la~tphP--~~lG----~----------------~~~hp~IttDfsEs~lE~iTp~~~~~~- 63 (737)
T TIGR01435 8 GHFGLEKENQRVTSD-GKLATTPHP--AVFG----N----------------REYHPYIQTDFSESQLELITPVTDSID- 63 (737)
T ss_pred CCcceEeeeeeECCC-CCccCCCCc--hHhC----C----------------cccCCCCCCCccHHHHHhcCCCCCCHH-
Confidence 488999999999986 54 22322 1111 1 1112345566 3689999999999873
Q ss_pred HHHHHHHHHHHHHHHHHHc--CCEEEeccCCCCCCCC-C-CCCCC--chHHHHHHHhcccccchhhhhhcccceeEEeeC
Q 011314 151 TCAEVNSHLYQVKAVAEEM--GIGFLGIGFQPKWGLK-D-IPVMP--KGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLD 224 (488)
Q Consensus 151 ~~~el~~~l~~l~~~a~~~--g~~ll~~G~~P~~~~~-~-~~~~p--k~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld 224 (488)
+.+ +|..+.+++... +=.|++....|..+.+ + +++.. ++-.+..++++. ..+|..| -.+||+|+|+.
T Consensus 64 ~~~----~L~~l~~~~~~~l~~E~lWP~SMP~~l~~~~~~i~iA~~~~~~~~~YR~~L~--~rYG~~~-q~isGiH~Nfs 136 (737)
T TIGR01435 64 VYR----WLENIHNVSLRSEPEELLWPLSMPPILPAEEDIIEYATLDSPDDVKYREYLA--KGYGKKK-QMVSGIHYNFS 136 (737)
T ss_pred HHH----HHHHHHHHHHhhCCCccccCCCCCCCCCCcccccccccCCChhHhHHHHHHH--HHhCchh-hccceEEEeec
Confidence 444 444555444443 3578888888886533 2 34421 111122223332 1235544 33999999999
Q ss_pred CCCH---------------HHHH-----HHHHHhhhhhHHHHHHhhCCCCCC
Q 011314 225 FSSE---------------ADMI-----RKFRAGLALQPIATALFANSPFTE 256 (488)
Q Consensus 225 ~~~e---------------~d~i-----~~~n~~~~l~P~l~AL~ANSPf~~ 256 (488)
++++ .++. +..+-...+..+++.||..||..+
T Consensus 137 ~~~~~~~~l~~~~~~~~~~~~f~n~~Y~~l~rnf~ry~Wll~YLfGASP~~~ 188 (737)
T TIGR01435 137 FPEALIDGLYAEQHENESKRDFKNRLYLKVAKNFLRYRWLLIYLTGASPVYE 188 (737)
T ss_pred CCHHHHHHHHHhccccccHHHHHhHHHHHHHHHHHHHhHHHHHHccCCchhh
Confidence 9731 1222 233444567899999999999653
No 17
>PF04262 Glu_cys_ligase: Glutamate-cysteine ligase ; InterPro: IPR007370 This is a group of bacterial glutamate-cysteine ligases that carry out the first step of the glutathione biosynthesis pathway according to the following equation: ATP + L-glutamate + L-cysteine = ADP + phosphate + L-glutamyl-L-cysteine (L-aminohexanoate can replace glutamate). ; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 3LN6_A 3LN7_B 1VA6_B 2D33_B 1V4G_B 2D32_A 3NZT_A.
Probab=98.60 E-value=2.5e-07 Score=95.79 Aligned_cols=155 Identities=19% Similarity=0.223 Sum_probs=91.7
Q ss_pred CCCeeEEEeccccccCCCCCCCChhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCcceeeecCccCCHHH
Q 011314 72 EKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQ 150 (488)
Q Consensus 72 ~~~~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~qiEis~~p~~~l~~ 150 (488)
...++|+|.|-.-|+.+ |+..... . ...+ |-+..-..|+-+ -.+|+|+.|+|+.++.+
T Consensus 17 ~~~~~GIErE~lRV~~~-G~Ls~tp--H------P~~l------------Gs~lthpyItTDFSEsqlE~ITP~~~s~~~ 75 (377)
T PF04262_consen 17 FGGNFGIERESLRVDPD-GRLSQTP--H------PKAL------------GSRLTHPYITTDFSESQLELITPPFDSIEE 75 (377)
T ss_dssp TTEEEEEEEEEEEEETT-SCB--S---S-------CCC--------------TTT-SSEEESSBTTEEEEEEEEBSSHHH
T ss_pred hcCCeeEEeccceeCCC-CcccCCC--C------Chhh------------CCcccCCCcCcchhHHHHHhhcCCccCHHH
Confidence 35699999999999986 5422211 0 0011 111122467777 47899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCC-CCCCCC---C------chHHHHHHHhcccccchhhhhhcccceeE
Q 011314 151 TCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL-KDIPVM---P------KGRYEIMRNYMPKVGSLGLDMMFRTCTVQ 220 (488)
Q Consensus 151 ~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~-~~~~~~---p------k~RY~~m~~~~~~~g~~g~~mm~~t~s~Q 220 (488)
+.+.|...-+.+...++. =.|++....|..+. +++|+. + |.-|+. ++. ..+|..|. .++|+|
T Consensus 76 al~~L~~Lh~~v~~~L~~--E~LWP~SMPp~L~~d~~IpiA~y~~s~~g~~k~~YR~---~L~--~rYG~~~Q-~isGIH 147 (377)
T PF04262_consen 76 ALQFLEDLHQFVRRNLED--ELLWPLSMPPYLPDDDDIPIAQYGSSNAGRMKTVYRE---GLA--HRYGKKMQ-MISGIH 147 (377)
T ss_dssp HHHHHHHHHHHHHHHSTT--EEE--SSS-SS-STTCCS-B---SSCHHHHHHHHHHH---HHH--HHH-TGGG-G--EEE
T ss_pred HHHHHHHHHHHHHHhccc--ccccCCCCCCCCCCccCCceeecCCcccchhHHHHHH---HHH--HHhCcccc-ccceeE
Confidence 998888877777766655 67889999888764 356653 1 123322 221 12355542 399999
Q ss_pred EeeCCCCHHHHHH----------------------HHHHhhhhhHHHHHHhhCCCCCCC
Q 011314 221 VNLDFSSEADMIR----------------------KFRAGLALQPIATALFANSPFTEG 257 (488)
Q Consensus 221 Vhld~~~e~d~i~----------------------~~n~~~~l~P~l~AL~ANSPf~~G 257 (488)
+|+.+++ ++++ ..+-...+..+++.||..||..+.
T Consensus 148 ~NfS~~~--~l~~~l~~~~~~~~~~~~fkn~~Y~~l~rnf~ry~WLl~YLfGASP~~~~ 204 (377)
T PF04262_consen 148 YNFSFPE--ELWKKLYEEQDSYESLQDFKNDLYFKLARNFLRYRWLLTYLFGASPAAEK 204 (377)
T ss_dssp EEEEE-H--HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHCCHHHHHC--BSEEEG
T ss_pred eccCCCH--HHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhh
Confidence 9999983 2332 234455688999999999998643
No 18
>COG2918 GshA Gamma-glutamylcysteine synthetase [Coenzyme metabolism]
Probab=98.57 E-value=6.2e-06 Score=85.75 Aligned_cols=177 Identities=17% Similarity=0.183 Sum_probs=104.2
Q ss_pred HHHHHHHHcCCCCCCCCeeEEEeccccccCCCCCCCChhHHHHHHHHHhhccccchhcccccccccccCCceeeec-CCc
Q 011314 58 EDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGG 136 (488)
Q Consensus 58 ~~l~~~~~~g~k~~~~~~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islE-p~~ 136 (488)
...+++++..-|-=.....|+|-|-.-|+.+ |..+.-. =.++| |-+..-..|+-+ -.+
T Consensus 6 ~~~l~~~e~~~~~l~~~~~GlEREslRVt~d-G~la~Tp-HP~~~-------------------G~~lthp~ItTDFsEs 64 (518)
T COG2918 6 SHMLAWLEALPKLLKGGSRGLERESLRVTAD-GALALTP-HPAAL-------------------GSALTHPWITTDFAES 64 (518)
T ss_pred HHHHHHHHHHHHHHhhcccccchhceeecCC-CcccCCC-ChHhh-------------------cccccCCcccchhhHh
Confidence 3444555333333344578999999999876 5421111 01122 111122457777 368
Q ss_pred ceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCC-CCCC-----CCchHHHHHH-Hhcccccchh
Q 011314 137 QFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPV-----MPKGRYEIMR-NYMPKVGSLG 209 (488)
Q Consensus 137 qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~-~~~~-----~pk~RY~~m~-~~~~~~g~~g 209 (488)
|+|+-|+|..+++.+...|...=..++..+.. -.+++....|..+.+ ++|+ +..+|.+.+. +.+.+ .+|
T Consensus 65 lLEfITP~~~~id~~l~~L~diH~~~~~kl~~--E~lWPlSmP~~lp~EedI~iAqyg~s~~gr~K~~YRegL~~--rYG 140 (518)
T COG2918 65 LLEFITPVTKDIEDTLTFLRDIHRFVARKLGD--ERLWPLSMPCYLPAEEDIPIAQYGTSNTGRFKTLYREGLKN--RYG 140 (518)
T ss_pred hhhhcCCCCccHHHHHHHHHHHHHHHHhcCCC--ceecCCCCCCCCCcccCcceeecCCCCCchHHHHHHHHHHH--Hhh
Confidence 99999999999988876555544444433333 378888888877643 5554 2234544333 22221 224
Q ss_pred hhhhcccceeEEeeCCCCH---------------HHHH-----HHHHHhhhhhHHHHHHhhCCC-----CCCCCCC
Q 011314 210 LDMMFRTCTVQVNLDFSSE---------------ADMI-----RKFRAGLALQPIATALFANSP-----FTEGKPN 260 (488)
Q Consensus 210 ~~mm~~t~s~QVhld~~~e---------------~d~i-----~~~n~~~~l~P~l~AL~ANSP-----f~~G~~t 260 (488)
.-| -.++|+|-|..++.. .|++ +..+-...+..++..||+.|| |+.|+.+
T Consensus 141 k~m-Q~ISGIHYNFSlp~~~w~~l~~~~~~e~s~~d~~s~~Y~~liRNf~R~~Wil~YLfGASPai~ssflk~~~~ 215 (518)
T COG2918 141 KLM-QTISGIHYNFSLPEAFWDALYGEQNEEKSARDFISAGYFKLIRNFYRFGWILPYLFGASPAICSSFLKGRPT 215 (518)
T ss_pred hHH-hhhhceeecccCCHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHhcCCCC
Confidence 444 338999999998821 1111 223334467888999999999 6677766
No 19
>PF03074 GCS: Glutamate-cysteine ligase; InterPro: IPR004308 This family represents the catalytic subunit of glutamate-cysteine ligase (6.3.2.2 from EC), also known as gamma-glutamylcysteine synthetase (GCS). This enzyme catalyses the rate limiting step in the biosynthesis of glutathione. The eukaryotic enzyme is a dimer of a heavy chain and a light chain with all the catalytic activity exhibited by the heavy chain.; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 3LVW_A 3LVV_A 3IG8_A 3IG5_A.
Probab=98.17 E-value=5.4e-06 Score=85.13 Aligned_cols=256 Identities=19% Similarity=0.243 Sum_probs=116.5
Q ss_pred hhhhhhcccceeEEeeCCCCHHHHHHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCC----CCCC-
Q 011314 208 LGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRA----GMLP- 282 (488)
Q Consensus 208 ~g~~mm~~t~s~QVhld~~~e~d~i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~Rt----G~~P- 282 (488)
+|.-|- .|-+||-.+..+.+++...|..+..+.|+++||+|.||++.|.-+... .|..+=..+..+|| |..|
T Consensus 6 mgFGMG--~ccLQvTfqa~~i~eaR~lyDql~~~~Pi~LalsAasp~~~G~l~d~D-~RW~vis~svDdRt~~E~~~~p~ 82 (371)
T PF03074_consen 6 MGFGMG--CCCLQVTFQACNIDEARYLYDQLAPLCPIMLALSAASPIFKGYLADVD-VRWNVISGSVDDRTPEERGLEPL 82 (371)
T ss_dssp GGGTTT--S-BEEEEEEESSHHHHHHHHHHHTTHHHHHHHHC----EETTEEBSBS--SHHHHHHHT----CCCCTS--S
T ss_pred cccccc--hhhhHHhHhccChHHHHHHHHhhcchhHHHHHHhhcChhhcceeeccc-cchHHHhhhhcCCCHHHcCCCcc
Confidence 455554 889999999999999999999999999999999999999999866554 78777766655565 3322
Q ss_pred --------C-CCCChhhHHHHHHHHh-------ccccee------EeecCceecC-CCCcHHH-hhhCCCCCCCC-----
Q 011314 283 --------F-VFDDSFGFEQYVDYAL-------DVPMYF------VYRKKKYIDC-AGMSFRD-FLAGKLPCLPG----- 333 (488)
Q Consensus 283 --------~-~F~~~~~fe~y~~~ll-------~~p~~~------v~r~g~~i~~-~~~~~~d-~~~~~~~~~~g----- 333 (488)
. .+++ ..-|+..-- +.++-. ...+++ +|. ...-+-. |++..+-.+.+
T Consensus 83 ~~~~~~i~ksRy~s---i~~yis~~~~~~~~ynD~~~~~~~~~~~~l~~~g-~D~~la~h~ahlfirDPlvif~e~i~~d 158 (371)
T PF03074_consen 83 KKNKFRIPKSRYDS---IDLYISNDPFNREEYNDINVPIDEDIYQRLLENG-VDELLARHFAHLFIRDPLVIFSERIEQD 158 (371)
T ss_dssp GGG----SS-SBSS----------STT--GGG--S-----HHHHHHHHS-S---HHHHHHHHHHTTS--S--BCGGGS--
T ss_pred cccccccccCcCCc---hhhhhcCCccchHHhCCCCCCCCHHHHHHHHHcC-CcHHHHHHHHHHcccCcHHHHHHHHHhc
Confidence 1 1111 111111000 000000 000001 100 0000000 00000000000
Q ss_pred CCCChhhhhhccCCCCCccccc--------c-eeeeecCCCCch-HHHhHHHHHHHHhhhchhhc--cchhhcCC-----
Q 011314 334 ELPTLNDWENHLTTIFPEVRLK--------R-YLEMRGADGGPW-RRLCALPAFWVGLLYDEDSL--QNVLDMTA----- 396 (488)
Q Consensus 334 ~rPt~~d~~~hlst~fp~VR~k--------~-~IEiR~~D~~p~-~~~~A~aAl~~GLl~~~~~~--~~~~~~~~----- 396 (488)
.--+-++|++--||-|+.||+| | .||+|.++.|.. -+..|++.|++=|....... .-..+..+
T Consensus 159 d~~~~dhFEniqStnWqt~RfKpPp~~s~iGWRVEfR~mEvQlTdfENAA~~~f~vLl~r~il~~~lnfyiPiSkV~eNM 238 (371)
T PF03074_consen 159 DETSTDHFENIQSTNWQTVRFKPPPPNSSIGWRVEFRPMEVQLTDFENAAYSVFIVLLTRAILSFKLNFYIPISKVDENM 238 (371)
T ss_dssp TTT--HHHHHHHTTSB-SEEEE--TT-TS--CEEEE---B--SSHHHHHHHHHHHHHHHHHHHHTTB-----HHHHHHHH
T ss_pred cchhhhhHhhhcccCcccccccCCCCCCCCCeeEEeeccceecchHhHhHHHHHHHHHHHHHHhCCceEEecccHhHHHH
Confidence 0123578899999999999988 4 499999999994 67777777766554322221 11111111
Q ss_pred ------cccHHHHHHHHhhhcccC-----CCCccC----CccHHHHHH-------HHHHHHHHHHHhcCCch------hh
Q 011314 397 ------DWTTGERQMLRNKVPKTG-----LKTPFR----DGLLRHVAQ-------DVLKLSKDGLERRGFKE------TG 448 (488)
Q Consensus 397 ------~~~~~~~~~lr~~aar~G-----l~a~~~----~~~l~~~~~-------~LL~~a~~gL~~~G~~e------~~ 448 (488)
+-...+.+|.|...+... ...... ..++.++.. -|+.+...-|+..+++. ..
T Consensus 239 ~~A~~rdAv~~~kF~fr~~~~~~~~~~~~~~~~~~~~~eemTI~EI~nGk~g~FpGLI~lv~~Yl~s~~~d~~tr~~l~~ 318 (371)
T PF03074_consen 239 KRAQKRDAVLNEKFWFRKDICNSENGCSNCSDSSEDEYEEMTIDEIFNGKNGEFPGLIPLVRSYLESINVDVETRCRLYQ 318 (371)
T ss_dssp HHTTBTTHHHH-EEEEES-S----------CSTT---EEEEEHHHHHH-TT-HHHHTHH-SS-GGGGGG-STTHH--HHH
T ss_pred HHHhhcchhhhCceeecccccccccccccccCCCccccccccHHHhccCCCCCccchHhHHHHHHHhcCCCHHHHHHHHH
Confidence 111112222222221110 011110 136666652 45666666666655442 26
Q ss_pred hHHHHHHHHHcC--CCHHHHHHHHH
Q 011314 449 FLNEVAEVVRTG--VTPAEKLLDMY 471 (488)
Q Consensus 449 ~L~~l~~~l~~g--~t~A~~~l~~~ 471 (488)
||+-|.++. +| .|.|.|+|+-.
T Consensus 319 YL~LIskRA-SGel~T~A~WiR~FV 342 (371)
T PF03074_consen 319 YLKLISKRA-SGELPTTATWIRNFV 342 (371)
T ss_dssp HHHHHHHHH-TTSS--HHHHHHHHH
T ss_pred HHHHHHHhh-CCccCcHHHHHHHHH
Confidence 788887777 45 58899999965
No 20
>KOG3754 consensus Gamma-glutamylcysteine synthetase [Coenzyme transport and metabolism]
Probab=98.11 E-value=1.3e-05 Score=83.10 Aligned_cols=390 Identities=16% Similarity=0.209 Sum_probs=200.4
Q ss_pred HHHH-HHHcCCCCCCCCeeEEEeccccccCCCCCC---CChhHHHHHHHHHhhccccchhcc-cccccccccCCceeeec
Q 011314 59 DLVG-YLASGCKPKEKWRIGTEHEKFGFEFGTLHP---MKYEQIAELLNSIAERFDWEKVME-GDYIIGLKQGKQSISLE 133 (488)
Q Consensus 59 ~l~~-~~~~g~k~~~~~~iGvE~E~~~vd~~t~~~---~~~~~i~~lL~~l~~~~g~~~~~e-~g~~igl~~~~~~islE 133 (488)
+++. |-+-+-+.+....-|=|+|+.+|+-++.+- ++.. -.++|..|...- ...+ +|+..-..++.++.-+|
T Consensus 29 Qfl~iyh~~k~r~~D~LkWGDEiEy~vV~fDd~~kk~rv~l~-~e~iL~~L~~~~---~~~~png~~~lwrPEyG~YMiE 104 (640)
T KOG3754|consen 29 QFLNIYHALKSRHGDVLKWGDEIEYMVVKFDDKNKKARVSLR-AEKILNELNEEE---SLTEPNGADVLWRPEYGRYMIE 104 (640)
T ss_pred HHHHHHHHHhhccCCcccccceeEEEEEecccccceeeeeee-HHHHHHHhhhhh---hccccCCCCccccccccceeec
Confidence 4444 334455677888999999999999887532 2221 267888776531 1111 22222233444444444
Q ss_pred --CCcceeeecCccCC----HHHHHHHHHHHHHHHHHHHHHcCCEEE-----eccCC----CCCCCC-------------
Q 011314 134 --PGGQFELSGAPLET----LHQTCAEVNSHLYQVKAVAEEMGIGFL-----GIGFQ----PKWGLK------------- 185 (488)
Q Consensus 134 --p~~qiEis~~p~~~----l~~~~~el~~~l~~l~~~a~~~g~~ll-----~~G~~----P~~~~~------------- 185 (488)
|| .|.-+ ..-++..++..++.+...+.+..+-+. -+|+. |...++
T Consensus 105 gTPg-------~Pygg~~~~fn~VEaNMr~RR~~~~~~L~~~e~~ltiT~FprlG~PgFt~pev~~n~~~~~asrSlf~P 177 (640)
T KOG3754|consen 105 GTPG-------SPYGGLMASFNFVEANMRKRRKIAEYKLSEDEVPLTITNFPRLGCPGFTNPEVPANPKNAAASRSLFLP 177 (640)
T ss_pred cCCC-------CCccchhhheehhhHHHHHHHHHHHhhccccccceEEeccccCCCCCCCCcCCCCCccCcccccceeCc
Confidence 32 23322 233445555555555555555444332 23443 332221
Q ss_pred CCCCCCchHHHHHHHhccc-ccc-------------------------------------------hhhhhhcccceeEE
Q 011314 186 DIPVMPKGRYEIMRNYMPK-VGS-------------------------------------------LGLDMMFRTCTVQV 221 (488)
Q Consensus 186 ~~~~~pk~RY~~m~~~~~~-~g~-------------------------------------------~g~~mm~~t~s~QV 221 (488)
+.-+.-.+|+..+.+-... .|. +|.-|- .|-+||
T Consensus 178 deaIn~HpRF~tLT~nIr~RRGeKV~invpifkD~nTp~pf~e~~~~~~~ped~~a~~pdhIymDsMGFGMG--ccCLQv 255 (640)
T KOG3754|consen 178 DEAINGHPRFPTLTANIRTRRGEKVAINVPIFKDTNTPSPFDEIYRDWFLPEDARAKKPDHIYMDSMGFGMG--CCCLQV 255 (640)
T ss_pred HHHhhcCCCcchhhhhhhhccCceeEEecceeccCCCCCCccchhhhccCccccccCCCCeEEEcccccCcc--ceeeEe
Confidence 1112334666655543321 121 122222 677999
Q ss_pred eeCCCCHHHHHHHHHHhhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHhcCCCCCC----CCCCC----------CCCC
Q 011314 222 NLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRA----GMLPF----------VFDD 287 (488)
Q Consensus 222 hld~~~e~d~i~~~n~~~~l~P~l~AL~ANSPf~~G~~tg~~s~R~~iw~~~~~~Rt----G~~P~----------~F~~ 287 (488)
-.+..+-+++...|..+..+.|+++||+|.||++.|.-+.-. .|..+-..+..+|| |..|- ..++
T Consensus 256 TFQA~ni~eAR~LYDqL~pi~PimlAlSAatP~frGylad~D-cRWnVIs~sVDdRT~eErgl~PL~~~~~~I~KSRYdS 334 (640)
T KOG3754|consen 256 TFQACNIDEARYLYDQLTPITPIMLALSAATPAFRGYLADQD-CRWNVISGSVDDRTPEERGLAPLKNKKLRIPKSRYDS 334 (640)
T ss_pred eeeccCchHHHHHHHhhccchHHHHHHhccChhhcccccccc-cccceeeccccCCChhhcCCccccccceecccccccc
Confidence 999999999999999999999999999999999999865443 56555555555666 44341 0011
Q ss_pred h--------------------hhHHHHHHHHhcccceeEeecCceecCCCCcHHHhhhCCCCCCCCCCCChhhhhhccCC
Q 011314 288 S--------------------FGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTT 347 (488)
Q Consensus 288 ~--------------------~~fe~y~~~ll~~p~~~v~r~g~~i~~~~~~~~d~~~~~~~~~~g~rPt~~d~~~hlst 347 (488)
- .-|++.++-=++.++-- .-..-+|..+-.+|.+-+... -.-+-++|++-.||
T Consensus 335 vD~yls~~~~~YNDvpl~ide~vy~~Ll~~~iD~~LAk-H~AHlfiRDp~~~F~e~i~qd------d~~ss~HFEniqST 407 (640)
T KOG3754|consen 335 VDLYLSPCKRKYNDVPLTIDEKVYGRLLEGGIDELLAK-HVAHLFIRDPVSLFEEKIHQD------DKTSSDHFENIQST 407 (640)
T ss_pred hheeecCCCCccCCCCccccHHHHHHHHhcCccHHHHH-HHHHHhhcChHHHHHHHHhcc------cccchhhhhhhccc
Confidence 0 01111111000000000 000001111122333333221 12245788899999
Q ss_pred CCCccccc--------c-eeeeecCCCCchH-HHhHHHHHHHHh----h-hchhhccchhhc---------CCcccHHHH
Q 011314 348 IFPEVRLK--------R-YLEMRGADGGPWR-RLCALPAFWVGL----L-YDEDSLQNVLDM---------TADWTTGER 403 (488)
Q Consensus 348 ~fp~VR~k--------~-~IEiR~~D~~p~~-~~~A~aAl~~GL----l-~~~~~~~~~~~~---------~~~~~~~~~ 403 (488)
-|...|+| | .||+|.+..|-.+ +..|+..|++-| + +.+.- .-.... -+|....+.
T Consensus 408 NWqtmRFKPPpp~s~iGWRVEFRp~EvQltDFENaAy~~fVvlltr~ilsf~ln~-l~piSkVdENMk~Aq~rDAil~~k 486 (640)
T KOG3754|consen 408 NWQTMRFKPPPPNSSIGWRVEFRPMEVQLTDFENAAYSVFVVLLTRVILSFNLNF-LIPISKVDENMKIAQKRDAILFEK 486 (640)
T ss_pred ccceeccCCcCCCCCCceeEEeeeeeEEeccccccceEEeehhhhHHHHhhhhhe-EeehhhhhhHHHHHHHHHHHHhhh
Confidence 99999999 4 3999999999743 344444444433 2 21111 001111 112223344
Q ss_pred HHHHhhhcccCCC----Cc--------cCCccHHHHH-------HHHHHHHHHHHHhcCCc------hhhhHHHHHHHHH
Q 011314 404 QMLRNKVPKTGLK----TP--------FRDGLLRHVA-------QDVLKLSKDGLERRGFK------ETGFLNEVAEVVR 458 (488)
Q Consensus 404 ~~lr~~aar~Gl~----a~--------~~~~~l~~~~-------~~LL~~a~~gL~~~G~~------e~~~L~~l~~~l~ 458 (488)
+|.|..-++.++. .. +...++.++. -.|+.+.+.-|..-..+ =+.||..|.++..
T Consensus 487 F~frk~~ckn~~~n~~g~q~~~~~s~~~~~~SIdeifngk~n~FPgli~~irsyl~s~~vD~dt~c~i~~YlklIskRAs 566 (640)
T KOG3754|consen 487 FWFRKSECKNAFRNGTGSQDCGDESEEFELLSIDEIFNGKENGFPGLITLIRSYLGSMEVDVDTHCTIEQYLKLISKRAS 566 (640)
T ss_pred heeecccccccCCCCCcccccCcchhhhhhccHHHHhcCCCCCCCcchHHHHHHHhhcCcCcccceeHHHHHHHHHHhhc
Confidence 4555554444442 11 1111333332 23556666666554322 1368888877763
Q ss_pred cC--CCHHHHHHHHH
Q 011314 459 TG--VTPAEKLLDMY 471 (488)
Q Consensus 459 ~g--~t~A~~~l~~~ 471 (488)
| .|-|.|+|+-.
T Consensus 567 -Gel~T~A~w~R~fv 580 (640)
T KOG3754|consen 567 -GELPTTAKWMRNFV 580 (640)
T ss_pred -CccchHHHHHHHHH
Confidence 4 46788988854
No 21
>PLN02284 glutamine synthetase
Probab=97.67 E-value=0.0012 Score=68.71 Aligned_cols=157 Identities=18% Similarity=0.155 Sum_probs=93.0
Q ss_pred CCCCCC-HHHHHHHHHcCCCCCCCCeeEEEeccccccCCC---------CCCCC----hh------H-HHHHHHHHhhcc
Q 011314 51 VTEPLT-KEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGT---------LHPMK----YE------Q-IAELLNSIAERF 109 (488)
Q Consensus 51 ~~~~~~-~~~l~~~~~~g~k~~~~~~iGvE~E~~~vd~~t---------~~~~~----~~------~-i~~lL~~l~~~~ 109 (488)
...|.+ ++..++.+++ ..-...+|+|+|||+++... +.+.+ +. . -.++++.+.+..
T Consensus 103 ~~dPR~vL~r~~~~~~~---~g~~~~~G~E~EF~lf~~~~~~~~g~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~l 179 (354)
T PLN02284 103 PTNKRAKAAKIFSHPDV---AAEEPWYGIEQEYTLLQKDVKWPLGWPVGGYPGPQGPYYCGVGADKAFGRDIVDAHYKAC 179 (354)
T ss_pred CCCHHHHHHHHHHHHHh---cCCceeEEeceEEEEEecCCcccCCCCCCCcccCCCCcccCcchhhHHHHHHHHHHHHHH
Confidence 444666 7777777765 12346899999999997431 11111 10 0 133444432110
Q ss_pred ccchhcccccccccccCCceeeecCC-cceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCC
Q 011314 110 DWEKVMEGDYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIP 188 (488)
Q Consensus 110 g~~~~~e~g~~igl~~~~~~islEp~-~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~ 188 (488)
.-.|+. -..+..|-+ ||.||+..+. +.-++++.+.-+...++.+|+++|+... +.|+.-.
T Consensus 180 ---------~~~Gi~--ve~~h~E~apGQ~Ei~l~~~-d~l~aAD~~~~~K~vvk~vA~~~Gl~AT---FMPKP~~---- 240 (354)
T PLN02284 180 ---------LYAGIN--ISGINGEVMPGQWEFQVGPV-VGISAGDQLWVARYILERITEIAGVVVS---FDPKPIP---- 240 (354)
T ss_pred ---------HHCCCC--eEEEEcCcCCCceEEEecCC-cHHHHHHHHHHHHHHHHHHHHHhCCEEE---EcCCCCC----
Confidence 001222 245677733 6999999995 6778999999999999999999998753 2343211
Q ss_pred CCCchHHHHHHHhcccccchhhhhhcccceeEEeeCCCC--H---HHHHH-HHHHh-hhhhHHHHHHhhCC
Q 011314 189 VMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSS--E---ADMIR-KFRAG-LALQPIATALFANS 252 (488)
Q Consensus 189 ~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~--e---~d~i~-~~n~~-~~l~P~l~AL~ANS 252 (488)
| + ...+|+|+|+..-+ . ....+ .+-.. +...|.+.|+++||
T Consensus 241 -----------------~----~--~~GSGmH~H~SL~~~~~~gg~~~~~~~l~~~~l~h~~~l~a~~~NS 288 (354)
T PLN02284 241 -----------------G----D--WNGAGAHTNYSTKSMREDGGYEVIKKAIEKLGLRHKEHIAAYGEGN 288 (354)
T ss_pred -----------------C----C--CccCcceeecChhhcccCCcHHHHHHHHHHHHHHHHHHhhhhhcCc
Confidence 1 0 11678888888764 2 12222 12222 56678888887654
No 22
>COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism]
Probab=97.52 E-value=0.0011 Score=70.73 Aligned_cols=108 Identities=21% Similarity=0.304 Sum_probs=73.2
Q ss_pred cccCCCCCC-HHHHHHHHH-cCCCCCCCCeeEEEeccccccCCC-----CCCCChh---------H----HHHHHHHHhh
Q 011314 48 AVVVTEPLT-KEDLVGYLA-SGCKPKEKWRIGTEHEKFGFEFGT-----LHPMKYE---------Q----IAELLNSIAE 107 (488)
Q Consensus 48 ~~~~~~~~~-~~~l~~~~~-~g~k~~~~~~iGvE~E~~~vd~~t-----~~~~~~~---------~----i~~lL~~l~~ 107 (488)
......|.+ ++.++++++ .|..+ ..+|.|+|||+||.+. +.+.+.. . ..++...+.+
T Consensus 101 ~p~~~dPR~vlkr~~~~l~~~G~~~---~~~g~E~EFfLfd~~~~~~~~~~~~~~~~yf~~~~~~~~~~~~~di~~~l~~ 177 (443)
T COG0174 101 TPYPRDPRSVLKRALARLKDEGLAP---AVVGPELEFFLFDRDGRDPDGGRPADKGGYFDVAPLDEAEDFRRDIVEALEA 177 (443)
T ss_pred CcCCCChHHHHHHHHHHHHhcCCcc---ceeecceeEEEeecccCCcccCccCCCCcccCccccccHHHHHHHHHHHHHH
Confidence 334445676 666666665 34444 5899999999999742 2232221 1 3444444433
Q ss_pred ccccchhcccccccccccCCceeeecC-CcceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEE
Q 011314 108 RFDWEKVMEGDYIIGLKQGKQSISLEP-GGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (488)
Q Consensus 108 ~~g~~~~~e~g~~igl~~~~~~islEp-~~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll 174 (488)
.| +. -..+..|- .||.||+.. ..++-++++++..+-..++.+|+++|+...
T Consensus 178 -~G------------i~--ie~~hhEva~gQ~EI~~~-~~~~l~~AD~~~~~K~vvk~vA~~hG~~aT 229 (443)
T COG0174 178 -AG------------IE--IEAIHHEVAPGQFEINLR-FDDALKAADQIVIFKYVVKEVAEKHGLTAT 229 (443)
T ss_pred -CC------------CC--cEeccccccCCceEEecC-CCCHHHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 22 22 23566773 369999999 778999999999999999999999998764
No 23
>PLN03036 glutamine synthetase; Provisional
Probab=97.50 E-value=0.0021 Score=68.51 Aligned_cols=154 Identities=16% Similarity=0.123 Sum_probs=91.6
Q ss_pred HHHHHHHHHcCCCCCCCCeeEEEeccccccCCC----CCC---C--C----hhH-------HHHHHHHHhhccccchhcc
Q 011314 57 KEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGT----LHP---M--K----YEQ-------IAELLNSIAERFDWEKVME 116 (488)
Q Consensus 57 ~~~l~~~~~~g~k~~~~~~iGvE~E~~~vd~~t----~~~---~--~----~~~-------i~~lL~~l~~~~g~~~~~e 116 (488)
...|...++.-....-...+|+|+||++++.+. +-+ . + |.. ..++++++.+..
T Consensus 167 R~~L~~vl~~~~~~g~~p~~G~E~EF~Lf~~~~~~~~G~~~~~~p~p~g~yy~~~~~d~~~~~~i~~~i~~a~------- 239 (432)
T PLN03036 167 RHRAAEIFSNKKVVDEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAHYKAC------- 239 (432)
T ss_pred HHHHHHHHHHhcccCCeEEEEeeeEEEEEEcccccccCCCCCCccCCCCCcCCCchhhhhhHHHHHHHHHHHH-------
Confidence 456666665432223346999999999997532 111 0 1 110 134444332211
Q ss_pred cccccccccCCceeeecCC-cceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHH
Q 011314 117 GDYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRY 195 (488)
Q Consensus 117 ~g~~igl~~~~~~islEp~-~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY 195 (488)
.-.|+. -..+..|-+ ||+||+..|+ +.-++++.+.-+...++++|+++|+... ++|+.-.
T Consensus 240 --~~~GI~--Ie~~~~E~gpGQ~Ei~l~~~-d~L~aAD~~~l~R~ivk~VA~~~Gl~AT---FMPKP~~----------- 300 (432)
T PLN03036 240 --LYAGIN--ISGTNGEVMPGQWEYQVGPS-VGIDAGDHIWCSRYILERITEQAGVVLT---LDPKPIE----------- 300 (432)
T ss_pred --HHCCCC--eEEEEcCcCCCceEEecCCC-hHHHHHHHHHHHHHHHHHHHHHhCCEEE---EcCCcCC-----------
Confidence 001221 245777743 6999999997 5667889999999999999999998763 3444211
Q ss_pred HHHHHhcccccchhhhhhcccceeEEeeCCCC--HHHHHHHH----H-HhhhhhHHHHHHhhCC
Q 011314 196 EIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSS--EADMIRKF----R-AGLALQPIATALFANS 252 (488)
Q Consensus 196 ~~m~~~~~~~g~~g~~mm~~t~s~QVhld~~~--e~d~i~~~----n-~~~~l~P~l~AL~ANS 252 (488)
| + ...+|+|+|+..-+ ++...+.+ . +.+...+.+.|+++||
T Consensus 301 ----------g----d--~~GSGmHiH~Sl~d~r~~gg~~~~~~~i~gl~l~H~~~i~A~~~Ns 348 (432)
T PLN03036 301 ----------G----D--WNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGN 348 (432)
T ss_pred ----------C----C--cCCCCceeEechhhccccchHHHHHHHHhhHHHHHHHHHHhhhcCh
Confidence 1 1 11678888888775 22122222 2 3566778888887744
No 24
>TIGR03105 gln_synth_III glutamine synthetase, type III. This family consists of the type III isozyme of glutamine synthetase, originally described in Rhizobium meliloti, where types I and II also occur.
Probab=97.27 E-value=0.0052 Score=65.84 Aligned_cols=104 Identities=21% Similarity=0.231 Sum_probs=68.1
Q ss_pred CCCCCC-HHHHHHHHH-cCCCCCCCCeeEEEeccccccCCC-CCCC--C---------hh-----H----HHHHHHHHhh
Q 011314 51 VTEPLT-KEDLVGYLA-SGCKPKEKWRIGTEHEKFGFEFGT-LHPM--K---------YE-----Q----IAELLNSIAE 107 (488)
Q Consensus 51 ~~~~~~-~~~l~~~~~-~g~k~~~~~~iGvE~E~~~vd~~t-~~~~--~---------~~-----~----i~~lL~~l~~ 107 (488)
...|.+ ++..++.++ .|. ...+|+|+|+++++... +.+. . |. . +.++.+.|..
T Consensus 94 ~~~PR~vL~r~~~~~~~~G~----~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 169 (435)
T TIGR03105 94 PQAPRVVLKRQLAEAAELGL----TLNTGVECEFFLLRRDEDGSLSIADRADTLAKPCYDQRGLMRRYDVLTEISDAMNA 169 (435)
T ss_pred CCCHHHHHHHHHHHHHhcCC----ceeEEeceEEEEEecCCCCCcccCCCCCCCCccCCCCcchhhhhHHHHHHHHHHHH
Confidence 344667 666666554 343 46999999999998532 1111 0 11 1 2333333322
Q ss_pred ccccchhcccccccccccCCceeeecCC-cceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEE
Q 011314 108 RFDWEKVMEGDYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (488)
Q Consensus 108 ~~g~~~~~e~g~~igl~~~~~~islEp~-~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll 174 (488)
. |+ +-..+..|-+ ||+||+..|. +.-++++.+..+...++++|+++|+...
T Consensus 170 -~------------gi--~ve~~~~E~gpGQ~Ei~l~~~-~~l~aaD~~~~~k~~vk~vA~~~Gl~at 221 (435)
T TIGR03105 170 -L------------GW--DPYQNDHEDANGQFEMNFTYA-DALTTADRHAFFRYMVKEIAEKHGMRAT 221 (435)
T ss_pred -C------------CC--CeEEeecCcCCCceEEecCcc-hHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 1 11 1235667743 7999999997 6788999999999999999999999764
No 25
>PF12224 Amidoligase_2: Putative amidoligase enzyme; InterPro: IPR022025 This family of proteins are likely to act as amidoligase enzymes [] Protein in this family are found in conserved gene neighbourhoods encoding a glutamine amidotransferase-like thiol peptidase (in proteobacteria) or an Aig2 family cyclotransferase protein (in firmicutes) [].
Probab=97.26 E-value=0.0039 Score=61.46 Aligned_cols=38 Identities=16% Similarity=0.223 Sum_probs=30.6
Q ss_pred cceeEEeeCCCC----HHHHHHHHHHhhhhhHHHHHHhhCCC
Q 011314 216 TCTVQVNLDFSS----EADMIRKFRAGLALQPIATALFANSP 253 (488)
Q Consensus 216 t~s~QVhld~~~----e~d~i~~~n~~~~l~P~l~AL~ANSP 253 (488)
+||+||||+..+ .+++.+.+.++..+.|.+..+..-++
T Consensus 112 scg~HVHv~~~~~~~~~~~l~~l~~~~~~~E~~l~~~~~~~~ 153 (252)
T PF12224_consen 112 SCGFHVHVGPEPPSFSLETLKRLAKAFWLFEPWLRRLLPPDR 153 (252)
T ss_pred CeeEEEEECCCCCCccHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 699999998763 45888888999999999888866553
No 26
>PRK09469 glnA glutamine synthetase; Provisional
Probab=97.20 E-value=0.0071 Score=65.40 Aligned_cols=46 Identities=24% Similarity=0.224 Sum_probs=40.0
Q ss_pred ceeeecCC--cceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEE
Q 011314 128 QSISLEPG--GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (488)
Q Consensus 128 ~~islEp~--~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll 174 (488)
..+..|-+ ||+||+..+. +.-++++.+..+...++.+|+++|+...
T Consensus 208 ~~~h~E~g~~GQ~Ei~l~~~-d~L~aaD~~~~~k~~vk~va~~~g~~at 255 (469)
T PRK09469 208 EAHHHEVATAGQNEVATRFN-TMTKKADEIQIYKYVVHNVAHAFGKTAT 255 (469)
T ss_pred EEeeCCCCCCCeEEEeccCC-CHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 46778843 7999999995 7889999999999999999999998764
No 27
>TIGR00653 GlnA glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation.
Probab=97.12 E-value=0.011 Score=63.84 Aligned_cols=108 Identities=23% Similarity=0.264 Sum_probs=72.1
Q ss_pred ccCCCCCC-HHHHHHHHHcCCCCCCCCeeEEEeccccccCCCCC---------------------------CCC----h-
Q 011314 49 VVVTEPLT-KEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLH---------------------------PMK----Y- 95 (488)
Q Consensus 49 ~~~~~~~~-~~~l~~~~~~g~k~~~~~~iGvE~E~~~vd~~t~~---------------------------~~~----~- 95 (488)
.....|.+ ++.+++.+++ ...-...+|+|+|+++++..... +.+ |
T Consensus 97 p~~~~PR~~L~r~~~~l~~--~~G~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (460)
T TIGR00653 97 PYERDPRSIAKRAEEYLKS--GIGDTAYFGPEPEFFLFDSVEFGSLANGSFYEVDSEEGRWNEESGNRGYKPRDKGGYFP 174 (460)
T ss_pred CCCCCHHHHHHHHHHHHHh--CCCCceeEEcceEEEEEecCccCcccccceeeeccccccccccCCcCCCcccCCccccC
Confidence 34455777 7788888875 22344689999999999853211 111 1
Q ss_pred ----hH----HHHHHHHHhhccccchhcccccccccccCCceeeecCC-cceeeecCccCCHHHHHHHHHHHHHHHHHHH
Q 011314 96 ----EQ----IAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVA 166 (488)
Q Consensus 96 ----~~----i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islEp~-~qiEis~~p~~~l~~~~~el~~~l~~l~~~a 166 (488)
.. +.++.+.+.. . |+ +-..+..|-+ ||+||+..|. +.-++++.+..+...++++|
T Consensus 175 ~~~~~~~~~~~~~i~~~l~~-~------------Gi--~v~~~~~E~gpGQ~Ei~l~~~-~~l~aAD~~~~~k~~ik~vA 238 (460)
T TIGR00653 175 VAPTDTAVDIRREMVLYLEQ-L------------GF--DVEVHHHEVATGQHEIDFKFD-TLLKTADDIQTYKYVVKNVA 238 (460)
T ss_pred CCCcccHHHHHHHHHHHHHH-c------------CC--CceeeecCcCCCceeEecCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 01 2333333322 1 11 1245677744 8999999995 58889999999999999999
Q ss_pred HHcCCEEE
Q 011314 167 EEMGIGFL 174 (488)
Q Consensus 167 ~~~g~~ll 174 (488)
+++|+...
T Consensus 239 ~~~G~~AT 246 (460)
T TIGR00653 239 RKHGKTAT 246 (460)
T ss_pred HHhCCEEE
Confidence 99998764
No 28
>PF00120 Gln-synt_C: Glutamine synthetase, catalytic domain; InterPro: IPR008146 Glutamine synthetase (6.3.1.2 from EC) (GS) [] plays an essential role in the metabolism of nitrogen by catalyzing the condensation of glutamate and ammonia to form glutamine. There seem to be three different classes of GS [, , ]: Class I enzymes (GSI) are specific to prokaryotes, and are oligomers of 12 identical subunits. The activity of GSI-type enzyme is controlled by the adenylation of a tyrosine residue. The adenylated enzyme is inactive (see IPR001637 from INTERPRO). Class II enzymes (GSII) are found in eukaryotes and in bacteria belonging to the Rhizobiaceae, Frankiaceae, and Streptomycetaceae families (these bacteria have also a class-I GS). GSII are octamer of identical subunits. Plants have two or more isozymes of GSII, one of the isozymes is translocated into the chloroplast. Class III enzymes (GSIII) have been found in Bacteroides fragilis. in Butyrivibrio fibrisolvens. It is a hexamer of identical chains and in some protozoa. It is much larger (about 700 amino acids) than the GSI (450 to 470 amino acids) or GSII (350 to 420 amino acids) enzymes. While the three classes of GS's are clearly structurally related, the sequence similarities are not so extensive.; GO: 0004356 glutamate-ammonia ligase activity, 0006807 nitrogen compound metabolic process; PDB: 2J9I_E 3ZXV_D 1HTQ_D 1HTO_F 2BVC_F 2WGS_G 3ZXR_B 2WHI_D 3NG0_A 1LGR_C ....
Probab=97.10 E-value=0.0071 Score=60.24 Aligned_cols=102 Identities=21% Similarity=0.324 Sum_probs=65.5
Q ss_pred CCC-HHHHHHHHHcCCCCCCCCeeEEEeccccccCCC--CCC------C-------------C--hh--HHHHHHHHHhh
Q 011314 54 PLT-KEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGT--LHP------M-------------K--YE--QIAELLNSIAE 107 (488)
Q Consensus 54 ~~~-~~~l~~~~~~g~k~~~~~~iGvE~E~~~vd~~t--~~~------~-------------~--~~--~i~~lL~~l~~ 107 (488)
|.+ ++.+++.+++ ..-...+|+|+||++++.++ +.+ . + .. .+.++.+.|.+
T Consensus 4 PR~~Lkr~~~~~~~---~g~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 80 (259)
T PF00120_consen 4 PRSILKRVLERLEE---MGLSFKVGFELEFYLFDRDDDGGWPRPSGYPDEPGQDYGGYYSLSPLDAGEDFLEEIVDALEQ 80 (259)
T ss_dssp HHHHHHHHHHHHHH---TCCEEEEEEEEEEEEESTCEETTSSSTTSEESESSSTTTBSSTTTTTSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---hCCceEEEEeEEEEEeccCcccccccccccccccccccCCcCCCchhhHHHHHHHHHHHHHHH
Confidence 344 4555555543 23337999999999999852 122 0 0 00 13444444433
Q ss_pred ccccchhcccccccccccCCceeeecCC-cceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEE
Q 011314 108 RFDWEKVMEGDYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (488)
Q Consensus 108 ~~g~~~~~e~g~~igl~~~~~~islEp~-~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll 174 (488)
. |+. -..+..|-+ ||+||+..|+..+ ++++.+......++++|+++|+...
T Consensus 81 -~------------Gi~--ve~~h~E~gpgQ~Ei~~~~~~~l-~aaD~~~~~k~~ik~vA~~~Gl~at 132 (259)
T PF00120_consen 81 -A------------GIP--VEQIHHEVGPGQYEINLGPCDPL-EAADNLVLFKEIIKEVARKHGLTAT 132 (259)
T ss_dssp -C------------T----EEEEEEESSTTEEEEEEEEEECH-HHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred -h------------hcc--ccccccccchHhhccccccCcHH-HHHHHHHHHHHHHHHHHHHcCCcee
Confidence 1 221 245677743 7999999987755 6778888999999999999998764
No 29
>PF14395 COOH-NH2_lig: Phage phiEco32-like COOH.NH2 ligase-type 2
Probab=78.12 E-value=15 Score=36.49 Aligned_cols=89 Identities=13% Similarity=0.093 Sum_probs=61.5
Q ss_pred CCeeEEEeccccccCCCCCCCChhHHHHHHHHHhhccccchhcccccccccccCCceeeecCCc----ceeeecCccCCH
Q 011314 73 KWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGG----QFELSGAPLETL 148 (488)
Q Consensus 73 ~~~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islEp~~----qiEis~~p~~~l 148 (488)
+..+|.-.|+.+.+..+++.++.+ ..+.. +|. ||. +.+.++-.. ..|+.-.|-++.
T Consensus 2 ~~~lGaDpEFmL~~~~g~~~v~AS---~f~~r------------~G~-vGc----D~~~~~~~~~~~PlaElRP~P~~~P 61 (261)
T PF14395_consen 2 DVLLGADPEFMLRNPNGKRMVPAS---RFFPR------------DGP-VGC----DARRLRGRRGIYPLAELRPAPSPDP 61 (261)
T ss_pred cccccCChHHHeecCCCCeEeehh---Hhccc------------CCc-cCc----cceeecCccccccceecCCCCCCCH
Confidence 457899999999988766577754 22211 111 232 223333222 679999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCC
Q 011314 149 HQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKW 182 (488)
Q Consensus 149 ~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~ 182 (488)
.++...+...++...+.....++..++ |..|+.
T Consensus 62 ~~L~~~i~~~l~~A~~~i~~~~l~W~A-G~mP~~ 94 (261)
T PF14395_consen 62 AELFENIRRALREAARRIPDRSLEWLA-GSMPFP 94 (261)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEec-CCCCCC
Confidence 999999999999998888887777766 445554
No 30
>PF04107 GCS2: Glutamate-cysteine ligase family 2(GCS2); InterPro: IPR006336 Also known as gamma-glutamylcysteine synthetase and gamma-ECS (6.3.2.2 from EC). This enzyme catalyses the first and rate limiting step in de novo glutathione biosynthesis. Members of this family are found in archaea, bacteria and plants. May and Leaver [] discuss the possible evolutionary origins of glutamate-cysteine ligase enzymes in different organisms and suggest that it evolved independently in different eukaryotes, from an ancestral bacterial enzyme. They also state that Arabidopsis thaliana (Mouse-ear cress) gamma-glutamylcysteine synthetase is structurally unrelated to mammalian, yeast and Escherichia coli homologues. In plants, there are separate cytosolic and chloroplast forms of the enzyme.; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 1R8G_A 2GWC_E 2GWD_A 1TT4_B.
Probab=69.98 E-value=2.4 Score=42.90 Aligned_cols=39 Identities=23% Similarity=0.182 Sum_probs=30.4
Q ss_pred CCCCCccccc---ceeeeecCCCC---c-hHHHhHHHHHHHHhhhc
Q 011314 346 TTIFPEVRLK---RYLEMRGADGG---P-WRRLCALPAFWVGLLYD 384 (488)
Q Consensus 346 st~fp~VR~k---~~IEiR~~D~~---p-~~~~~A~aAl~~GLl~~ 384 (488)
..+|+++|++ +++|+|++|++ + ..+..+.+.++.++...
T Consensus 213 ~~~~~~~r~~~~~~t~E~r~~d~~~~p~~~~~~~~~~r~~~a~~~~ 258 (288)
T PF04107_consen 213 RMIWWDVRPSPRFPTVELRVHDSTLFPPVRLRAVLEARLLDALPAP 258 (288)
T ss_dssp GGHHBSEEEETTTTEEEEEEEETT-EESSHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhcCCCCCCChhHHHhhcCCCcHHHHHHHHHHHHHHHhchHh
Confidence 3789999997 68999999999 4 46777777777766543
No 31
>KOG0683 consensus Glutamine synthetase [Amino acid transport and metabolism]
Probab=67.57 E-value=12 Score=38.93 Aligned_cols=115 Identities=21% Similarity=0.261 Sum_probs=69.3
Q ss_pred HHHHHHHHHcCCCCCCCCeeEEEeccccccCCCCCCCChh-------------HH--HHHH-HHHhhccccchhcccccc
Q 011314 57 KEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYE-------------QI--AELL-NSIAERFDWEKVMEGDYI 120 (488)
Q Consensus 57 ~~~l~~~~~~g~k~~~~~~iGvE~E~~~vd~~t~~~~~~~-------------~i--~~lL-~~l~~~~g~~~~~e~g~~ 120 (488)
....++.+..+.-......+|+|.|+.+++...+.|.-+. +| .++. .++.+.+=..-++
T Consensus 118 R~~c~~~~~~~~~~~~~PWfg~Eqeyt~l~~~~~~p~gwp~~GFp~Pqgpyyc~VGad~~~~rdiveahy~acLy----- 192 (380)
T KOG0683|consen 118 RVACARIMPKLSTKDTEPWFGMEQEYTLLDALDGHPFGWPKGGFPGPQGPYYCGVGADRVFGRDIVEAHYRACLY----- 192 (380)
T ss_pred hhhHHHHhccccccccCCchhhhHHHhhhccccCCcccCCccCCCCCCCCceeeccccccccchhhhhhHHHHHh-----
Confidence 6677778877763445557899999999998556553222 01 0000 0000000000011
Q ss_pred cccccCCceeeecC-CcceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCC
Q 011314 121 IGLKQGKQSISLEP-GGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKW 182 (488)
Q Consensus 121 igl~~~~~~islEp-~~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~ 182 (488)
-||.- .-+..|. -||.|++.+||..++. .++|--.+..|+++|+++|+.. .++|+.
T Consensus 193 aGl~i--~G~N~EvmPgQwEfqvGp~~GI~~-gD~lw~aR~il~rVae~~Gvia---sf~pKp 249 (380)
T KOG0683|consen 193 AGLNI--SGINVEVMPGQWEFQVGPCEGISM-GDQLWMARYILHRVAEKFGVIA---SFDPKP 249 (380)
T ss_pred hheee--ccccccccCceeEEeecchhcccc-hhhHHHHHHHHHHHHHHhCeeE---EecCCC
Confidence 11211 2355663 3699999999998864 5677788899999999999765 456654
No 32
>PF09899 DUF2126: Putative amidoligase enzyme (DUF2126); InterPro: IPR018667 This domain is found in bacterial transglutaminase and transglutaminase-like proteins. Their exact function is, as yet, unknown.
Probab=65.31 E-value=2.7e+02 Score=32.32 Aligned_cols=53 Identities=25% Similarity=0.462 Sum_probs=44.1
Q ss_pred ceeeecC-CcceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCC
Q 011314 128 QSISLEP-GGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL 184 (488)
Q Consensus 128 ~~islEp-~~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~ 184 (488)
..+++|+ .|.+-+=.+|++++ +.+.+.+..+...|++.|+-++--|+.|-..+
T Consensus 323 TAL~vE~R~G~l~vFlPP~~~l----e~yL~LiaaiE~tA~~l~~pv~lEGY~PP~D~ 376 (819)
T PF09899_consen 323 TALCVEPRDGRLHVFLPPLESL----EDYLDLIAAIEATAAELGMPVVLEGYPPPRDP 376 (819)
T ss_pred eEEEEEEeCCEEEEEcCCcccH----HHHHHHHHHHHHHHHHcCCCEEEecCCcCCCC
Confidence 4788896 58999999999664 45667888899999999999999999987654
No 33
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=40.37 E-value=1.4e+02 Score=31.76 Aligned_cols=54 Identities=15% Similarity=0.063 Sum_probs=40.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCC-----CCCCCchHHHHHHHhcc
Q 011314 147 TLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKD-----IPVMPKGRYEIMRNYMP 203 (488)
Q Consensus 147 ~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~-----~~~~pk~RY~~m~~~~~ 203 (488)
+-.++.+.+..+|.++-++|++.|+.++- ||--++.. .-++...=|+.|.+-.+
T Consensus 204 ~~e~lwenl~yFL~~ViPvAEe~GV~LAi---HPDDPP~~i~GlpRIvst~ed~~rll~~V~ 262 (394)
T TIGR00695 204 DEEKLRDNLAFFLQEILPVAEEYGVQMAI---HPDDPPRPILGLPRIVSTIEDMQWLVATSD 262 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCEEEE---CCCCCCccccCCCcccCCHHHHHHHHHhcC
Confidence 56789999999999999999999999965 66555431 12344566888877664
No 34
>TIGR03686 pupylate_PafA proteasome accessory factor PafA. Members of this family are PafA (proteasome accessory factor A), a protein shown to regulate steady-state levels of certain proteasome targets in Mycobacterium tuberculosis. Iyer, et al (2008) suggest that PafA is the ligase for Pup, a ubiquitin analog attached to an epsilon-amino group of a Lys side-chain to direct the target to the proteasome.
Probab=39.21 E-value=56 Score=35.26 Aligned_cols=72 Identities=17% Similarity=0.131 Sum_probs=45.7
Q ss_pred eeEEEeccccccCC-CCCCCChhHHH-HHHHHHhhccccchhcccccccccccCCceeeecCCcceeeecCccCCHHHHH
Q 011314 75 RIGTEHEKFGFEFG-TLHPMKYEQIA-ELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTC 152 (488)
Q Consensus 75 ~iGvE~E~~~vd~~-t~~~~~~~~i~-~lL~~l~~~~g~~~~~e~g~~igl~~~~~~islEp~~qiEis~~p~~~l~~~~ 152 (488)
-.|+|.|+=+.-.. +.++++.+++. .++..+.+.. -.-| .+..+|+++=+.-|+--|+||+-|.++.++.
T Consensus 3 i~GiEtEyGv~~~~~~~~~~~~~~~a~~lF~~v~~~~------rssN--~~L~NGaRlYvD~gaHPEYstpEc~~~~d~v 74 (453)
T TIGR03686 3 IFGVETEYGITCMDGSSRRLSPDEVARYLFRPVVSWG------RSSN--VFLANGSRLYLDVGSHPEYATAECDSLRQLI 74 (453)
T ss_pred cccceeeeeeeecCCCCCCCCHHHHHHHHHHHHHhhc------ccCC--eeccCCceEEecCCCCCCcCCcccCCHHHHH
Confidence 47999996555444 23567666533 3433332211 0112 3456688888888888999999999988776
Q ss_pred HH
Q 011314 153 AE 154 (488)
Q Consensus 153 ~e 154 (488)
.-
T Consensus 75 ~~ 76 (453)
T TIGR03686 75 AH 76 (453)
T ss_pred HH
Confidence 53
No 35
>PF03136 Pup_ligase: Pup-ligase protein; InterPro: IPR004347 Pupylation is a novel protein modification system found in some bacteria []. This entry represents two related groups of proteins involved in this system. Pup ligases, such as PafA, conjugate the prokaryotic ubiquitin-like protein Pup to lysine residues in target proteins, marking them for degradation []. Pup deamidases, such as PafD, catalyse the deamidation of the Pup C-terminal glutamine to glutamate, thereby rendering the protein competent for conjugation []. It has been suggested that proteins in this entry are related to gamma-glutamyl-cysteine synthetases []. ; GO: 0010498 proteasomal protein catabolic process, 0019941 modification-dependent protein catabolic process
Probab=32.75 E-value=73 Score=34.45 Aligned_cols=53 Identities=9% Similarity=-0.033 Sum_probs=38.8
Q ss_pred ccccCCceeeecCCcceeeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEe
Q 011314 122 GLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLG 175 (488)
Q Consensus 122 gl~~~~~~islEp~~qiEis~~p~~~l~~~~~el~~~l~~l~~~a~~~g~~ll~ 175 (488)
.+..+|+++=++ ++-.|+||+-|.++.++...=.+--..++.++++.+..+-.
T Consensus 67 ~fL~NGaRlYvD-~aHPEYsTPEc~~~~d~v~~DrAGe~i~~~aa~~a~~~~~~ 119 (444)
T PF03136_consen 67 VFLPNGARLYVD-HAHPEYSTPECDSPRDLVAYDRAGERIMQDAAREAEQRLGE 119 (444)
T ss_pred eeccCcceEeec-CCCcCccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 345668899898 88899999999999988776555555666666665554433
No 36
>COG1312 UxuA D-mannonate dehydratase [Carbohydrate transport and metabolism]
Probab=30.53 E-value=1.9e+02 Score=30.14 Aligned_cols=83 Identities=19% Similarity=0.282 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCC--CCCchHHHHHHHhcccccchhhhhhcccceeEEeeC
Q 011314 147 TLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIP--VMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLD 224 (488)
Q Consensus 147 ~l~~~~~el~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~--~~pk~RY~~m~~~~~~~g~~g~~mm~~t~s~QVhld 224 (488)
+-+.+.+.|.-+|+++-++|++.|+++..-.=+|-++.--.| ++...-|+.|.+..... +.|..+ ||=+++
T Consensus 182 d~~~L~~nL~yFL~~ViPVAEe~gVkmaiHPDDPP~pi~GLpRIvst~ed~~~ll~~vdSp-~NGiTl------CtGS~G 254 (362)
T COG1312 182 DEEKLWENLAYFLKEVIPVAEEVGVKMAIHPDDPPWPIFGLPRIVSTIEDYQRLLEMVDSP-YNGITL------CTGSLG 254 (362)
T ss_pred CHHHHHHHHHHHHHhhcchHHhcCceEEeCCCCCCccccCcchhcCCHHHHHHHHHhccCc-cCCEEE------eccccc
Confidence 456778888899999999999999999775555555433222 45567788888766422 223322 222555
Q ss_pred CCCHHHHHHHHH
Q 011314 225 FSSEADMIRKFR 236 (488)
Q Consensus 225 ~~~e~d~i~~~n 236 (488)
.-..+|++...+
T Consensus 255 ~~~dnDl~~mir 266 (362)
T COG1312 255 ARADNDLPEMIR 266 (362)
T ss_pred cCccccHHHHHH
Confidence 554455544444
No 37
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=26.84 E-value=67 Score=30.51 Aligned_cols=40 Identities=18% Similarity=0.284 Sum_probs=26.2
Q ss_pred CCCCCeeEEEeccccccCCCCCCCChhHHHHHHHHHhhcccc
Q 011314 70 PKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDW 111 (488)
Q Consensus 70 ~~~~~~iGvE~E~~~vd~~t~~~~~~~~i~~lL~~l~~~~g~ 111 (488)
.-+...||||+|-. +.++.+...+..+.+|+..|..+|+.
T Consensus 109 ~~N~~SIGIEl~G~--~~~~~t~aQ~~aL~~L~~~L~~~y~i 148 (185)
T PRK11789 109 RCNDFSIGIELEGT--DTLPFTDAQYQALAALTRALRAAYPI 148 (185)
T ss_pred CCCCCEEEEEEECC--CCCCccHHHHHHHHHHHHHHHHHcCC
Confidence 45778999999943 22223334444477888888888764
No 38
>COG3023 ampD N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=25.49 E-value=63 Score=32.20 Aligned_cols=42 Identities=26% Similarity=0.363 Sum_probs=29.1
Q ss_pred CCCCCCCCeeEEEeccccccCCCCCCCChhH---HHHHHHHHhhcc
Q 011314 67 GCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQ---IAELLNSIAERF 109 (488)
Q Consensus 67 g~k~~~~~~iGvE~E~~~vd~~t~~~~~~~~---i~~lL~~l~~~~ 109 (488)
|.+.-+++.||||+|-...+.+ +.|-+-++ +.+|++.+..++
T Consensus 98 Gr~~~Nd~SIGIElvN~G~~~~-~~py~~AQiqal~~L~k~i~~ry 142 (257)
T COG3023 98 GRERCNDFSIGIELVNRGTDAS-GPPYTEAQIQALIALLKDIIARY 142 (257)
T ss_pred ccccccCCceeEEEeeCCCCCC-CCCCCHHHHHHHHHHHHHHHHHc
Confidence 5566688999999997777643 33444344 667778887777
No 39
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism]
Probab=23.48 E-value=41 Score=31.63 Aligned_cols=48 Identities=19% Similarity=0.267 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhccc
Q 011314 157 SHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPK 204 (488)
Q Consensus 157 ~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~ 204 (488)
.|++.++.++++.+--++.+|.+=.+.--..|.+...|-..+.+.+..
T Consensus 18 GHl~vi~~al~~vDeliI~iGSa~~~~t~~nPfTagER~~mi~~~L~~ 65 (172)
T COG1056 18 GHLYVIKRALSKVDELIIVIGSAQESHTLKNPFTAGERIPMIRDRLRE 65 (172)
T ss_pred hHHHHHHHHHHhCCEEEEEEccCcccccccCCCCccchhHHHHHHHHh
Confidence 578889999999999999999998877667788999999888888743
No 40
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase. In some archaeal species, a lower-scoring paralog, uncharacterized with respect to activity, is also present. These score between trusted and noise cutoffs.
Probab=23.11 E-value=1.7e+02 Score=27.19 Aligned_cols=49 Identities=22% Similarity=0.280 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHcCCEEEeccCCCCCCCCCCCCCCchHHHHHHHhccc
Q 011314 156 NSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPK 204 (488)
Q Consensus 156 ~~~l~~l~~~a~~~g~~ll~~G~~P~~~~~~~~~~pk~RY~~m~~~~~~ 204 (488)
..|+..++.+++..+..+++.|..+.......+.++..|++++.+-+..
T Consensus 13 ~GHl~ii~~a~~~~D~lii~i~s~~~~~k~~~p~~~~eR~~mi~~al~~ 61 (165)
T TIGR01527 13 LGHLEVIKKIAEEVDELIIGIGSAQESHTLENPFTAGERILMITQSLKE 61 (165)
T ss_pred HHHHHHHHHHHHHCCEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 3577778888888888888877776554445677889999999887753
Done!