Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>011319
MDKNQQQQSDSPTRDPKSYTVLSIDCLKGTSKADEWTADMLQTGDIVEEFTIGGGSGLGS
GSGSCRTYKAPFKNGRSGVQKILHGSFKNKETSILVRVRRGAEEFAELQACIVPESGGRR
NCYMLRSITDPNYAAGFTDRTEADCLELLASRSSRIVSALARARLQEGYVSYPWERRKQE
VLSVPNSSCFLSMLLLPKASDVVASRYNDVEDTLARANAWLNASQATGVPIVFMNIQTES
LLTKISGETASSTVNSGSLSDLSNVANASLYGFEDYHGVDLGVVRAVRLWYAPVGGELAI
EIKLKEGDSKLGFAISRTEEGFIYISTVIDDDENIPSTRSGLSILYKEAVSASKLLVVSR
VSNQKVLPWIVSSTGAVRCFDTVSLSQKLSLHRHAKVPILLHVFLWDQALASTSGSSTRL
RAASLPTMPLPSEVRLARQPNENQIQPLPAEVPNDNEIRNNRERKLERDTAGEVSFRFHD
FALKNNWV

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011319
        (488 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2118081 - symbol:AT4G12070 species:3702 "Arabi...  1462  8.8e-150  1


>TAIR|locus:2118081 [details] [associations]
            symbol:AT4G12070 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] GO:GO:0005886 EMBL:CP002687 EMBL:AY044323
            EMBL:AK118335 IPI:IPI00534967 RefSeq:NP_567387.1 UniGene:At.3079
            PRIDE:Q94B03 EnsemblPlants:AT4G12070.1 GeneID:826815
            KEGG:ath:AT4G12070 TAIR:At4g12070 InParanoid:Q94B03 OMA:YVSYPWE
            PhylomeDB:Q94B03 ProtClustDB:CLSN2689403 Genevestigator:Q94B03
            Uniprot:Q94B03
        Length = 483

 Score = 1462 (519.7 bits), Expect = 8.8e-150, P = 8.8e-150
 Identities = 307/500 (61%), Positives = 371/500 (74%)

Query:     1 MDKNQQQQSDSPTRDPKSYTVLSIDCLKGTSKADEWTADMLQTGDIVEEFTIXXXXXXXX 60
             MD+  Q +S  PT  P +  VLSIDCLKG+SK++EW+ DMLQTGDIVEE  I        
Sbjct:     1 MDRTHQPES--PTARPGNTVVLSIDCLKGSSKSEEWSGDMLQTGDIVEEIRIGSGPGSAI 58

Query:    61 XXXXCRTYKAPFKNGRSGVQKILHGSFKNKETSILVRVRRGAEEFAELQACIVP-ESGGR 119
                    +KAPFK G++ +QK+LH SF+NKETSI+VRVRRG+++F++L ACIVP ES G+
Sbjct:    59 -------FKAPFKGGKAWLQKVLHNSFRNKETSIVVRVRRGSDDFSDLSACIVPNESAGK 111

Query:   120 RNCYMLRSITDPNYAAGFTDRTEADCLELLASRSSRIVSALARARLQEGYVSYPWERRKQ 179
             R  YMLRSI DPNY  GF+DRTE+DCL L  SR SR+V AL +A+LQ+GYVSYPWERR Q
Sbjct:   112 RQ-YMLRSIDDPNYTVGFSDRTESDCLGLQESRGSRMVEALVKAKLQDGYVSYPWERRMQ 170

Query:   180 EVLSVPNSSCFLSMLLLPKASDV--VASRYNDVEDTLARANAWLNASQATGVPIVFMNIQ 237
             E L +  SS FLS+L LPKAS      SRYND+EDTLARANAWL+ SQA GVPIVFMNIQ
Sbjct:   171 EALPISGSSNFLSILFLPKASAYGRTGSRYNDLEDTLARANAWLSCSQANGVPIVFMNIQ 230

Query:   238 TESLLTKISGETASSTVNSGSLSDLSNVANASLYGFEDYHGVDLGVVRAVRLWYAPVGGE 297
             TESLLTKISGETAS+TVN+ SLSDLSN+AN SLYGFEDYHGVD+GVVRAVRLW+AP+G E
Sbjct:   231 TESLLTKISGETASATVNTTSLSDLSNLANTSLYGFEDYHGVDIGVVRAVRLWFAPLGVE 290

Query:   298 LAIEIKLKEGDSKLGFAISRTEEGFIYISTVID-DDENIPSTRSGLSILYKEAVSASKLL 356
               +EIKLK+ D+KLGF+ISRTEEGFIY+S+V D +DE+ P+ RSGLS LY+EA  AS+ L
Sbjct:   291 FPLEIKLKDDDTKLGFSISRTEEGFIYVSSVTDHEDESAPAARSGLSSLYREAAKASRRL 350

Query:   357 VVSRVSNQKVLPWIVSSTGAVRCFDTVSLSQKLSLHRHAKVPILLHVFLWDQALA----- 411
             VVSRV NQKVLPW+VSSTGA+RC+DTVSLSQKLSLHRHAKV I LHVFLWD +       
Sbjct:   351 VVSRVGNQKVLPWMVSSTGAIRCYDTVSLSQKLSLHRHAKVHIGLHVFLWDSSATADFSS 410

Query:   412 ---STSGSSTRLRA-ASLPTMPLP--SEVRLARQPNENQIQPLPAEVPNDNEIRNNRERK 465
                S+SG +  L +  +L +   P   EV   RQ  + Q+ PLP     D ++      +
Sbjct:   411 PPRSSSGGTHLLFSNETLDSTEFPRYGEVLPPRQVGDRQVMPLP-----DEDVF-----R 460

Query:   466 LERDTAGEVSFRFHDFALKN 485
              ER+ AG  SF+F +    N
Sbjct:   461 FERENAGNASFKFQEIPFTN 480


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      488       476   0.00078  119 3  11 22  0.42    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  273 KB (2144 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.28u 0.12s 39.40t   Elapsed:  00:00:02
  Total cpu time:  39.28u 0.12s 39.40t   Elapsed:  00:00:02
  Start:  Fri May 10 02:15:42 2013   End:  Fri May 10 02:15:44 2013

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