Query 011322
Match_columns 488
No_of_seqs 401 out of 3515
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 05:44:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011322.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011322hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxd_A FAD-dependent pyridine 100.0 3.1E-58 1.1E-62 464.5 46.7 396 49-469 7-407 (415)
2 3fg2_P Putative rubredoxin red 100.0 7.4E-58 2.5E-62 459.9 47.4 393 51-469 1-396 (404)
3 3ef6_A Toluene 1,2-dioxygenase 100.0 6E-58 2E-62 461.1 43.2 391 51-469 2-395 (410)
4 1q1r_A Putidaredoxin reductase 100.0 6.7E-54 2.3E-58 434.0 45.7 403 50-476 3-413 (431)
5 3klj_A NAD(FAD)-dependent dehy 100.0 2.2E-55 7.7E-60 437.2 33.2 375 48-477 6-384 (385)
6 2gqw_A Ferredoxin reductase; f 100.0 5.8E-54 2E-58 431.6 42.3 392 50-475 6-403 (408)
7 1m6i_A Programmed cell death p 100.0 2.3E-51 7.8E-56 422.0 32.7 406 48-461 8-479 (493)
8 4eqs_A Coenzyme A disulfide re 100.0 9.8E-50 3.3E-54 403.7 33.4 393 52-474 1-425 (437)
9 2bc0_A NADH oxidase; flavoprot 100.0 7.8E-49 2.7E-53 403.6 32.2 407 50-480 34-483 (490)
10 1xhc_A NADH oxidase /nitrite r 100.0 2.1E-48 7E-53 385.3 33.6 354 51-454 8-362 (367)
11 3iwa_A FAD-dependent pyridine 100.0 3.2E-48 1.1E-52 397.6 33.0 411 51-478 3-450 (472)
12 3oc4_A Oxidoreductase, pyridin 100.0 5.1E-48 1.7E-52 393.9 34.2 397 52-474 3-427 (452)
13 2cdu_A NADPH oxidase; flavoenz 100.0 1.5E-48 5.2E-53 397.8 29.8 403 52-478 1-436 (452)
14 3kd9_A Coenzyme A disulfide re 100.0 1.8E-47 6.1E-52 389.7 31.7 399 50-475 2-430 (449)
15 2v3a_A Rubredoxin reductase; a 100.0 1.7E-46 5.7E-51 374.8 37.0 369 50-453 3-378 (384)
16 3cgb_A Pyridine nucleotide-dis 100.0 1.4E-46 4.7E-51 385.8 33.5 403 51-479 36-473 (480)
17 1nhp_A NADH peroxidase; oxidor 100.0 3.3E-47 1.1E-51 387.5 28.6 402 52-479 1-436 (447)
18 3ntd_A FAD-dependent pyridine 100.0 4.8E-46 1.6E-50 390.4 34.5 386 52-461 2-437 (565)
19 3ics_A Coenzyme A-disulfide re 100.0 2.1E-44 7E-49 379.2 40.1 408 17-461 14-453 (588)
20 1mo9_A ORF3; nucleotide bindin 100.0 2.4E-42 8.3E-47 357.7 39.0 402 48-483 40-518 (523)
21 2qae_A Lipoamide, dihydrolipoy 100.0 1.7E-42 5.7E-47 354.8 35.4 400 51-484 2-463 (468)
22 1zmd_A Dihydrolipoyl dehydroge 100.0 1.9E-42 6.6E-47 354.9 34.6 402 50-482 5-466 (474)
23 1xdi_A RV3303C-LPDA; reductase 100.0 1.5E-42 5.2E-47 357.7 33.2 400 51-484 2-466 (499)
24 1zk7_A HGII, reductase, mercur 100.0 7.5E-42 2.6E-46 349.9 36.7 397 50-483 3-456 (467)
25 2hqm_A GR, grase, glutathione 100.0 4.9E-42 1.7E-46 352.0 34.6 397 50-480 10-472 (479)
26 2a8x_A Dihydrolipoyl dehydroge 100.0 1.7E-42 5.9E-47 354.3 30.7 399 51-484 3-459 (464)
27 1ojt_A Surface protein; redox- 100.0 5.5E-43 1.9E-47 359.5 26.7 399 50-483 5-471 (482)
28 1dxl_A Dihydrolipoamide dehydr 100.0 3.2E-42 1.1E-46 353.2 31.0 402 49-484 4-465 (470)
29 1ebd_A E3BD, dihydrolipoamide 100.0 3.4E-42 1.2E-46 351.3 30.7 396 51-482 3-454 (455)
30 1v59_A Dihydrolipoamide dehydr 100.0 1.1E-42 3.6E-47 357.3 26.9 403 50-484 4-473 (478)
31 3l8k_A Dihydrolipoyl dehydroge 100.0 6.4E-42 2.2E-46 350.0 28.1 400 51-483 4-458 (466)
32 3urh_A Dihydrolipoyl dehydroge 100.0 4.5E-42 1.6E-46 353.6 26.8 404 48-485 22-487 (491)
33 2eq6_A Pyruvate dehydrogenase 100.0 4.9E-41 1.7E-45 343.2 34.1 395 51-484 6-456 (464)
34 1ges_A Glutathione reductase; 100.0 2.5E-41 8.7E-46 343.9 31.2 390 50-477 3-448 (450)
35 2wpf_A Trypanothione reductase 100.0 1.7E-41 5.8E-46 348.8 30.2 317 130-479 117-475 (495)
36 1onf_A GR, grase, glutathione 100.0 2.4E-42 8.1E-47 356.0 23.8 401 51-479 2-496 (500)
37 1fec_A Trypanothione reductase 100.0 1.5E-42 5.2E-47 356.3 20.2 317 130-479 113-471 (490)
38 3lad_A Dihydrolipoamide dehydr 100.0 4.5E-40 1.5E-44 337.6 37.7 402 50-485 2-467 (476)
39 2r9z_A Glutathione amide reduc 100.0 3.8E-41 1.3E-45 343.7 29.4 391 50-479 3-448 (463)
40 3dk9_A Grase, GR, glutathione 100.0 2.9E-41 1E-45 346.5 27.1 396 49-477 18-476 (478)
41 2yqu_A 2-oxoglutarate dehydrog 100.0 1.8E-40 6E-45 338.6 31.5 397 52-484 2-450 (455)
42 4dna_A Probable glutathione re 100.0 5E-41 1.7E-45 343.3 26.9 395 50-481 4-452 (463)
43 1lvl_A Dihydrolipoamide dehydr 100.0 3.3E-40 1.1E-44 336.5 32.2 395 50-485 4-454 (458)
44 3ic9_A Dihydrolipoamide dehydr 100.0 4.1E-41 1.4E-45 345.9 24.3 398 50-484 7-468 (492)
45 3o0h_A Glutathione reductase; 100.0 2.1E-41 7E-46 347.9 21.6 395 50-481 25-472 (484)
46 3qfa_A Thioredoxin reductase 1 100.0 3.5E-40 1.2E-44 341.0 30.1 400 49-480 30-504 (519)
47 3dgh_A TRXR-1, thioredoxin red 100.0 4.5E-41 1.5E-45 345.5 22.9 398 49-479 7-475 (483)
48 3dgz_A Thioredoxin reductase 2 100.0 5.4E-40 1.8E-44 337.7 30.6 398 50-480 5-476 (488)
49 4g6h_A Rotenone-insensitive NA 100.0 6.7E-41 2.3E-45 343.7 20.8 298 48-376 39-398 (502)
50 4b1b_A TRXR, thioredoxin reduc 100.0 5E-40 1.7E-44 338.1 26.6 398 51-482 42-524 (542)
51 2x8g_A Thioredoxin glutathione 100.0 1.3E-38 4.4E-43 335.6 30.2 397 49-480 105-583 (598)
52 2vdc_G Glutamate synthase [NAD 100.0 2.7E-39 9.3E-44 327.6 13.6 330 3-376 60-441 (456)
53 2zbw_A Thioredoxin reductase; 100.0 7.9E-38 2.7E-42 306.4 21.5 298 49-376 3-314 (335)
54 3ab1_A Ferredoxin--NADP reduct 100.0 8.3E-38 2.8E-42 309.4 21.4 300 49-376 12-325 (360)
55 4gcm_A TRXR, thioredoxin reduc 100.0 3.4E-37 1.2E-41 298.9 25.2 293 48-375 3-302 (312)
56 3f8d_A Thioredoxin reductase ( 100.0 1.8E-36 6.2E-41 294.8 23.6 290 50-376 14-314 (323)
57 3lzw_A Ferredoxin--NADP reduct 100.0 1.6E-37 5.5E-42 303.6 16.1 293 50-376 6-312 (332)
58 1gte_A Dihydropyrimidine dehyd 100.0 2.3E-37 7.8E-42 342.4 17.8 348 3-390 117-526 (1025)
59 3hyw_A Sulfide-quinone reducta 100.0 2.5E-36 8.5E-41 305.3 21.4 302 51-376 2-330 (430)
60 3cty_A Thioredoxin reductase; 100.0 8.6E-36 2.9E-40 289.9 23.6 289 49-376 14-313 (319)
61 3fbs_A Oxidoreductase; structu 100.0 4E-36 1.4E-40 288.9 20.0 278 51-376 2-289 (297)
62 3vrd_B FCCB subunit, flavocyto 100.0 5.5E-36 1.9E-40 300.7 21.5 297 51-376 2-321 (401)
63 3h8l_A NADH oxidase; membrane 100.0 2.4E-35 8.2E-40 296.7 25.6 288 52-376 2-333 (409)
64 4a5l_A Thioredoxin reductase; 100.0 2.2E-36 7.4E-41 293.4 17.1 299 49-375 2-308 (314)
65 1fl2_A Alkyl hydroperoxide red 100.0 1.2E-35 4.1E-40 287.6 21.7 285 52-376 2-302 (310)
66 3sx6_A Sulfide-quinone reducta 100.0 7.6E-36 2.6E-40 302.7 20.9 304 51-376 4-341 (437)
67 2q7v_A Thioredoxin reductase; 100.0 3.5E-35 1.2E-39 286.4 24.6 288 50-376 7-309 (325)
68 1trb_A Thioredoxin reductase; 100.0 1E-35 3.5E-40 289.4 20.3 292 50-376 4-311 (320)
69 3itj_A Thioredoxin reductase 1 100.0 6.2E-36 2.1E-40 293.1 17.7 295 48-376 19-332 (338)
70 3r9u_A Thioredoxin reductase; 100.0 4.9E-35 1.7E-39 283.7 23.9 289 50-376 3-309 (315)
71 2q0l_A TRXR, thioredoxin reduc 100.0 5.8E-35 2E-39 282.9 23.5 288 52-376 2-306 (311)
72 4fk1_A Putative thioredoxin re 100.0 1.2E-35 4.1E-40 286.8 18.6 285 48-375 3-296 (304)
73 1vdc_A NTR, NADPH dependent th 100.0 1.8E-34 6.3E-39 282.2 21.0 300 50-376 7-320 (333)
74 4a9w_A Monooxygenase; baeyer-v 100.0 2.2E-34 7.7E-39 284.0 17.9 300 51-376 3-349 (357)
75 3d1c_A Flavin-containing putat 100.0 1.1E-33 3.8E-38 280.7 22.1 307 51-378 4-338 (369)
76 1hyu_A AHPF, alkyl hydroperoxi 100.0 2.4E-33 8.3E-38 289.8 25.0 289 49-376 210-513 (521)
77 2a87_A TRXR, TR, thioredoxin r 100.0 6.5E-34 2.2E-38 278.6 19.7 288 49-375 12-312 (335)
78 3h28_A Sulfide-quinone reducta 100.0 5.7E-34 1.9E-38 288.4 17.9 298 51-376 2-330 (430)
79 1cjc_A Protein (adrenodoxin re 100.0 9E-33 3.1E-37 280.5 11.9 291 50-376 5-392 (460)
80 1o94_A Tmadh, trimethylamine d 100.0 2.4E-32 8.1E-37 292.8 13.2 294 48-396 386-714 (729)
81 2xve_A Flavin-containing monoo 100.0 4.5E-31 1.6E-35 269.0 21.7 289 51-378 2-340 (464)
82 1lqt_A FPRA; NADP+ derivative, 100.0 6.2E-32 2.1E-36 274.1 10.8 287 50-376 2-384 (456)
83 2gag_A Heterotetrameric sarcos 100.0 6E-31 2E-35 289.2 19.1 279 51-376 128-441 (965)
84 3k30_A Histamine dehydrogenase 100.0 7.8E-32 2.7E-36 287.7 11.7 276 48-377 388-673 (690)
85 3s5w_A L-ornithine 5-monooxyge 100.0 1.7E-30 5.8E-35 265.7 17.6 314 50-374 29-444 (463)
86 1y56_A Hypothetical protein PH 100.0 1.6E-30 5.6E-35 266.9 14.1 253 51-376 108-374 (493)
87 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.7E-29 6E-34 268.9 17.4 262 48-374 370-671 (671)
88 2gv8_A Monooxygenase; FMO, FAD 100.0 7.7E-29 2.6E-33 252.0 17.7 289 49-378 4-361 (447)
89 3gwf_A Cyclohexanone monooxyge 100.0 1.2E-27 4.2E-32 247.2 17.5 300 50-375 7-453 (540)
90 3uox_A Otemo; baeyer-villiger 99.9 3.5E-26 1.2E-30 236.7 15.2 307 49-375 7-462 (545)
91 4ap3_A Steroid monooxygenase; 99.9 3.2E-25 1.1E-29 229.6 19.0 304 49-375 19-467 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 2.3E-24 8E-29 223.9 19.4 303 49-376 14-463 (542)
93 2ywl_A Thioredoxin reductase r 99.9 9.3E-22 3.2E-26 174.2 17.6 153 209-376 3-168 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 1.3E-18 4.4E-23 178.6 23.4 292 50-343 38-457 (501)
95 2e5v_A L-aspartate oxidase; ar 99.7 8E-20 2.7E-24 186.2 -7.6 223 129-376 128-370 (472)
96 2cul_A Glucose-inhibited divis 99.6 8E-15 2.7E-19 134.9 16.2 155 208-376 4-229 (232)
97 3fpz_A Thiazole biosynthetic e 99.6 9.1E-18 3.1E-22 163.1 -10.7 257 49-375 63-321 (326)
98 2gqf_A Hypothetical protein HI 99.5 1.1E-15 3.8E-20 152.2 -2.3 122 50-175 3-169 (401)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.2 2.6E-12 8.9E-17 129.5 3.0 95 248-345 203-307 (431)
100 1rp0_A ARA6, thiazole biosynth 99.2 5.1E-11 1.7E-15 112.9 10.9 164 208-376 40-272 (284)
101 2ywl_A Thioredoxin reductase r 99.1 1.3E-10 4.5E-15 102.0 8.9 107 52-175 2-111 (180)
102 1kf6_A Fumarate reductase flav 99.1 8.2E-11 2.8E-15 122.9 7.9 36 51-87 5-40 (602)
103 2bry_A NEDD9 interacting prote 99.1 2.5E-11 8.7E-16 124.2 1.8 169 4-175 23-231 (497)
104 2zxi_A TRNA uridine 5-carboxym 99.0 2E-09 6.9E-14 111.0 13.2 160 50-237 26-219 (637)
105 3dme_A Conserved exported prot 99.0 3.2E-09 1.1E-13 104.1 12.5 68 248-317 149-219 (369)
106 2bry_A NEDD9 interacting prote 98.9 3.8E-10 1.3E-14 115.4 4.6 147 162-309 37-232 (497)
107 4dgk_A Phytoene dehydrogenase; 98.9 1.4E-09 4.8E-14 111.7 8.6 57 249-306 221-277 (501)
108 3v76_A Flavoprotein; structura 98.9 8.7E-10 3E-14 110.0 6.8 124 47-174 23-187 (417)
109 3pl8_A Pyranose 2-oxidase; sub 98.9 2.1E-12 7.3E-17 135.4 -13.5 67 260-326 271-347 (623)
110 2cul_A Glucose-inhibited divis 98.9 2.3E-09 8E-14 98.2 8.0 117 50-175 2-126 (232)
111 3ces_A MNMG, tRNA uridine 5-ca 98.9 2E-09 6.9E-14 111.4 7.7 160 50-237 27-220 (651)
112 3alj_A 2-methyl-3-hydroxypyrid 98.8 2.7E-09 9.1E-14 105.4 6.9 121 49-175 9-161 (379)
113 3nlc_A Uncharacterized protein 98.8 8.4E-09 2.9E-13 105.8 9.9 124 49-175 105-278 (549)
114 3nix_A Flavoprotein/dehydrogen 98.8 4.5E-08 1.5E-12 97.9 14.9 67 250-318 107-175 (421)
115 2e4g_A Tryptophan halogenase; 98.8 2E-08 6.8E-13 104.2 11.9 59 249-308 194-253 (550)
116 3pvc_A TRNA 5-methylaminomethy 98.8 1.4E-07 4.7E-12 100.5 18.6 58 249-308 412-470 (689)
117 2i0z_A NAD(FAD)-utilizing dehy 98.8 7.7E-09 2.6E-13 104.4 7.7 123 49-174 24-191 (447)
118 2gag_B Heterotetrameric sarcos 98.8 9E-08 3.1E-12 95.1 15.4 65 249-316 174-238 (405)
119 1s3e_A Amine oxidase [flavin-c 98.8 1E-08 3.5E-13 105.7 8.1 53 252-306 215-267 (520)
120 1d4d_A Flavocytochrome C fumar 98.8 1.4E-07 4.9E-12 98.1 16.7 61 248-308 254-318 (572)
121 3ps9_A TRNA 5-methylaminomethy 98.7 2.4E-07 8E-12 98.6 17.9 58 249-308 417-474 (676)
122 3nlc_A Uncharacterized protein 98.7 4.9E-08 1.7E-12 100.2 11.9 111 207-318 107-290 (549)
123 1yvv_A Amine oxidase, flavin-c 98.7 3.4E-08 1.2E-12 95.6 10.2 119 51-173 2-161 (336)
124 2vou_A 2,6-dihydroxypyridine h 98.7 5E-08 1.7E-12 96.9 11.5 124 49-175 3-154 (397)
125 3axb_A Putative oxidoreductase 98.7 2.6E-08 8.7E-13 100.7 9.4 66 249-316 181-262 (448)
126 3fmw_A Oxygenase; mithramycin, 98.7 1.3E-08 4.5E-13 105.6 7.1 122 50-174 48-207 (570)
127 3i3l_A Alkylhalidase CMLS; fla 98.7 2.5E-08 8.4E-13 103.8 9.0 124 48-174 20-188 (591)
128 2x3n_A Probable FAD-dependent 98.7 1.3E-08 4.6E-13 101.1 6.7 123 50-175 5-167 (399)
129 3dje_A Fructosyl amine: oxygen 98.7 2.9E-07 1E-11 92.5 16.3 58 249-307 161-221 (438)
130 4a9w_A Monooxygenase; baeyer-v 98.7 1.8E-07 6.2E-12 91.0 14.2 97 208-306 4-131 (357)
131 2xdo_A TETX2 protein; tetracyc 98.7 1.6E-07 5.3E-12 93.3 13.1 123 49-175 24-183 (398)
132 3cgv_A Geranylgeranyl reductas 98.6 4.3E-08 1.5E-12 97.2 8.0 121 51-174 4-162 (397)
133 1rp0_A ARA6, thiazole biosynth 98.6 3.9E-08 1.3E-12 92.9 7.1 122 50-175 38-192 (284)
134 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 7.8E-08 2.7E-12 93.4 9.3 118 52-172 2-163 (342)
135 3ihg_A RDME; flavoenzyme, anth 98.6 7.4E-08 2.5E-12 99.6 8.6 38 49-89 3-40 (535)
136 3nyc_A D-arginine dehydrogenas 98.6 1.8E-08 6.1E-13 99.3 3.7 64 249-316 154-217 (381)
137 3lzw_A Ferredoxin--NADP reduct 98.6 1.9E-07 6.5E-12 89.9 10.9 100 208-309 8-128 (332)
138 3nrn_A Uncharacterized protein 98.6 1.2E-07 4.1E-12 94.9 9.5 57 248-308 188-244 (421)
139 2gf3_A MSOX, monomeric sarcosi 98.6 5.2E-07 1.8E-11 89.1 14.0 79 231-316 135-213 (389)
140 3v76_A Flavoprotein; structura 98.6 3.4E-07 1.2E-11 91.2 12.5 100 206-308 26-188 (417)
141 3oz2_A Digeranylgeranylglycero 98.6 3.6E-08 1.2E-12 97.5 5.2 37 50-89 3-39 (397)
142 3cp8_A TRNA uridine 5-carboxym 98.6 3.8E-08 1.3E-12 101.9 5.2 162 48-236 18-213 (641)
143 3e1t_A Halogenase; flavoprotei 98.6 6.8E-08 2.3E-12 99.2 7.1 124 49-175 5-173 (512)
144 1y56_B Sarcosine oxidase; dehy 98.6 3.8E-08 1.3E-12 97.1 5.0 46 128-174 157-205 (382)
145 3rp8_A Flavoprotein monooxygen 98.6 5.9E-08 2E-12 96.7 6.3 125 48-175 20-182 (407)
146 4ap3_A Steroid monooxygenase; 98.5 1.1E-06 3.7E-11 90.8 15.7 102 208-309 22-163 (549)
147 2qa1_A PGAE, polyketide oxygen 98.5 6.6E-08 2.3E-12 98.9 6.0 123 48-174 8-165 (500)
148 3ab1_A Ferredoxin--NADP reduct 98.5 8.5E-07 2.9E-11 86.6 13.7 99 207-306 14-130 (360)
149 3klj_A NAD(FAD)-dependent dehy 98.5 1.2E-07 4.2E-12 93.5 7.7 101 206-310 8-119 (385)
150 1ryi_A Glycine oxidase; flavop 98.5 1.1E-07 3.7E-12 93.8 7.2 36 49-87 15-50 (382)
151 3itj_A Thioredoxin reductase 1 98.5 4.4E-07 1.5E-11 87.6 11.1 101 206-309 21-144 (338)
152 2yqu_A 2-oxoglutarate dehydrog 98.5 1.3E-07 4.6E-12 95.5 7.5 99 50-176 166-266 (455)
153 2zbw_A Thioredoxin reductase; 98.5 7.5E-07 2.6E-11 86.0 12.5 97 208-306 6-120 (335)
154 3atr_A Conserved archaeal prot 98.5 3.1E-08 1.1E-12 100.2 2.7 123 50-175 5-163 (453)
155 1y0p_A Fumarate reductase flav 98.5 1.6E-07 5.6E-12 97.8 8.2 38 49-89 124-161 (571)
156 2qa2_A CABE, polyketide oxygen 98.5 1.7E-07 5.7E-12 95.9 8.1 123 49-174 10-166 (499)
157 1qo8_A Flavocytochrome C3 fuma 98.5 1.1E-07 3.8E-12 98.9 6.7 38 49-89 119-156 (566)
158 3alj_A 2-methyl-3-hydroxypyrid 98.5 9.3E-07 3.2E-11 87.0 13.0 97 207-308 11-161 (379)
159 3sx6_A Sulfide-quinone reducta 98.5 1.8E-07 6E-12 94.2 7.6 100 208-312 5-117 (437)
160 2gqf_A Hypothetical protein HI 98.5 1.1E-06 3.8E-11 87.1 13.1 99 208-308 5-169 (401)
161 3f8d_A Thioredoxin reductase ( 98.5 9.3E-07 3.2E-11 84.6 12.1 100 208-310 16-128 (323)
162 3gwf_A Cyclohexanone monooxyge 98.5 7.7E-07 2.6E-11 91.7 12.2 101 208-308 9-150 (540)
163 2gmh_A Electron transfer flavo 98.5 4.1E-07 1.4E-11 94.8 10.2 37 50-89 34-76 (584)
164 1fl2_A Alkyl hydroperoxide red 98.5 8.7E-07 3E-11 84.5 11.7 101 209-309 3-117 (310)
165 1k0i_A P-hydroxybenzoate hydro 98.5 2.2E-07 7.4E-12 92.1 7.7 121 51-175 2-164 (394)
166 3hyw_A Sulfide-quinone reducta 98.4 2.8E-07 9.7E-12 92.4 7.8 96 208-308 3-110 (430)
167 1qo8_A Flavocytochrome C3 fuma 98.4 1E-06 3.5E-11 91.6 12.1 141 168-308 78-313 (566)
168 2uzz_A N-methyl-L-tryptophan o 98.4 4.3E-07 1.5E-11 89.1 8.4 35 51-88 2-36 (372)
169 3fbs_A Oxidoreductase; structu 98.4 1.2E-06 4.2E-11 82.7 11.4 99 208-309 3-114 (297)
170 2gqw_A Ferredoxin reductase; f 98.4 5.6E-07 1.9E-11 89.6 8.7 96 51-175 145-240 (408)
171 2q0l_A TRXR, thioredoxin reduc 98.4 1.7E-06 5.9E-11 82.5 11.8 98 209-309 3-116 (311)
172 4hb9_A Similarities with proba 98.4 4.1E-07 1.4E-11 90.4 7.7 35 52-89 2-36 (412)
173 2q7v_A Thioredoxin reductase; 98.4 1.9E-06 6.6E-11 82.8 12.1 100 208-309 9-125 (325)
174 2xve_A Flavin-containing monoo 98.4 2.5E-06 8.5E-11 86.4 13.2 103 208-310 3-171 (464)
175 2i0z_A NAD(FAD)-utilizing dehy 98.4 2.8E-06 9.6E-11 85.6 13.5 111 208-319 27-212 (447)
176 3uox_A Otemo; baeyer-villiger 98.4 1E-06 3.5E-11 90.9 10.3 101 208-308 10-150 (545)
177 3vrd_B FCCB subunit, flavocyto 98.4 4.8E-07 1.6E-11 89.9 7.4 100 207-311 2-112 (401)
178 3h8l_A NADH oxidase; membrane 98.4 3E-07 1E-11 91.6 5.7 98 208-310 2-116 (409)
179 2r9z_A Glutathione amide reduc 98.4 5.5E-07 1.9E-11 91.2 7.6 98 50-175 165-265 (463)
180 1vdc_A NTR, NADPH dependent th 98.4 1.8E-06 6E-11 83.3 10.9 98 208-309 9-126 (333)
181 2v3a_A Rubredoxin reductase; a 98.4 6.8E-07 2.3E-11 88.2 8.0 98 51-175 145-244 (384)
182 4fk1_A Putative thioredoxin re 98.3 2.9E-06 9.8E-11 80.8 12.1 99 209-309 8-119 (304)
183 3oz2_A Digeranylgeranylglycero 98.3 4.1E-06 1.4E-10 82.6 13.7 98 209-307 6-162 (397)
184 1ges_A Glutathione reductase; 98.3 5.7E-07 2E-11 90.7 7.5 98 50-175 166-266 (450)
185 3d1c_A Flavin-containing putat 98.3 4.6E-06 1.6E-10 81.5 13.8 98 208-308 5-144 (369)
186 1xhc_A NADH oxidase /nitrite r 98.3 5.8E-07 2E-11 88.1 7.2 99 206-310 7-116 (367)
187 4at0_A 3-ketosteroid-delta4-5a 98.3 1E-06 3.6E-11 90.3 9.2 37 50-89 40-76 (510)
188 1q1r_A Putidaredoxin reductase 98.3 1.6E-06 5.5E-11 86.9 10.4 102 207-312 4-119 (431)
189 3fg2_P Putative rubredoxin red 98.3 9.6E-07 3.3E-11 87.8 8.6 97 208-309 2-112 (404)
190 1lvl_A Dihydrolipoamide dehydr 98.3 4.5E-07 1.5E-11 91.7 6.2 97 50-176 170-270 (458)
191 3ef6_A Toluene 1,2-dioxygenase 98.3 2.8E-06 9.5E-11 84.6 11.8 99 208-310 3-114 (410)
192 2x3n_A Probable FAD-dependent 98.3 3.3E-06 1.1E-10 83.7 12.2 100 208-308 7-167 (399)
193 2eq6_A Pyruvate dehydrogenase 98.3 6.3E-07 2.1E-11 90.8 7.1 98 50-175 168-272 (464)
194 3kkj_A Amine oxidase, flavin-c 98.3 4.4E-07 1.5E-11 84.5 5.6 37 50-89 1-37 (336)
195 4eqs_A Coenzyme A disulfide re 98.3 1.4E-06 4.6E-11 87.6 9.4 95 51-175 147-241 (437)
196 3h28_A Sulfide-quinone reducta 98.3 3.8E-07 1.3E-11 91.5 4.9 98 208-310 3-112 (430)
197 3c96_A Flavin-containing monoo 98.3 3.5E-07 1.2E-11 91.2 4.6 36 50-88 3-39 (410)
198 2oln_A NIKD protein; flavoprot 98.3 2.1E-06 7.1E-11 85.0 10.1 35 51-88 4-38 (397)
199 1onf_A GR, grase, glutathione 98.3 1.3E-06 4.6E-11 89.3 8.7 98 51-176 176-277 (500)
200 1hyu_A AHPF, alkyl hydroperoxi 98.3 3.6E-06 1.2E-10 86.4 12.0 103 207-309 212-328 (521)
201 1y0p_A Fumarate reductase flav 98.3 5.9E-06 2E-10 85.9 13.6 100 208-307 127-317 (571)
202 1nhp_A NADH peroxidase; oxidor 98.3 1.1E-06 3.7E-11 88.6 7.5 98 50-175 148-247 (447)
203 2aqj_A Tryptophan halogenase, 98.3 4.6E-07 1.6E-11 93.6 4.6 45 130-175 175-223 (538)
204 2a87_A TRXR, TR, thioredoxin r 98.3 4.3E-06 1.5E-10 80.7 11.2 99 207-309 14-128 (335)
205 1chu_A Protein (L-aspartate ox 98.3 2.9E-06 1E-10 87.4 10.4 35 50-88 7-41 (540)
206 2gv8_A Monooxygenase; FMO, FAD 98.3 4.6E-06 1.6E-10 84.0 11.6 102 206-309 5-181 (447)
207 2hqm_A GR, grase, glutathione 98.2 1.3E-06 4.4E-11 88.9 7.6 99 50-176 184-287 (479)
208 1ebd_A E3BD, dihydrolipoamide 98.2 8.4E-07 2.9E-11 89.7 6.1 98 50-175 169-271 (455)
209 1trb_A Thioredoxin reductase; 98.2 5E-06 1.7E-10 79.5 11.3 99 208-310 6-119 (320)
210 3lxd_A FAD-dependent pyridine 98.2 2.5E-06 8.7E-11 85.0 9.5 100 207-310 9-122 (415)
211 2wpf_A Trypanothione reductase 98.2 1.5E-06 5E-11 88.8 7.8 98 50-175 190-293 (495)
212 3ics_A Coenzyme A-disulfide re 98.2 1.4E-06 4.8E-11 91.0 7.8 98 50-175 186-283 (588)
213 1fec_A Trypanothione reductase 98.2 1.6E-06 5.5E-11 88.4 7.8 99 50-176 186-290 (490)
214 2vou_A 2,6-dihydroxypyridine h 98.2 5.5E-06 1.9E-10 82.0 11.4 100 207-308 5-154 (397)
215 1yvv_A Amine oxidase, flavin-c 98.2 1.3E-05 4.4E-10 77.2 13.6 98 208-308 3-163 (336)
216 1k0i_A P-hydroxybenzoate hydro 98.2 7E-06 2.4E-10 81.1 11.9 101 208-309 3-165 (394)
217 2qcu_A Aerobic glycerol-3-phos 98.2 7.4E-06 2.5E-10 83.7 12.3 35 50-87 2-36 (501)
218 1ryi_A Glycine oxidase; flavop 98.2 8.2E-06 2.8E-10 80.2 12.0 63 250-316 165-227 (382)
219 4b1b_A TRXR, thioredoxin reduc 98.2 2.6E-06 8.8E-11 87.5 8.5 99 48-175 220-320 (542)
220 3cty_A Thioredoxin reductase; 98.2 8E-06 2.7E-10 78.2 11.6 99 207-309 16-128 (319)
221 1mo9_A ORF3; nucleotide bindin 98.2 2E-06 6.8E-11 88.5 7.7 96 52-175 215-317 (523)
222 3jsk_A Cypbp37 protein; octame 98.2 1.8E-06 6.2E-11 82.6 6.8 37 50-89 78-116 (344)
223 1ojt_A Surface protein; redox- 98.2 1.1E-06 3.8E-11 89.4 5.6 98 50-175 184-287 (482)
224 3kd9_A Coenzyme A disulfide re 98.2 3.2E-06 1.1E-10 85.2 8.8 100 207-310 3-117 (449)
225 2wdq_A Succinate dehydrogenase 98.2 1.7E-06 6E-11 90.0 6.8 35 51-88 7-41 (588)
226 1w4x_A Phenylacetone monooxyge 98.2 2E-05 7E-10 81.3 14.9 99 208-306 17-153 (542)
227 1v59_A Dihydrolipoamide dehydr 98.2 1.6E-06 5.5E-11 88.2 6.3 98 51-176 183-289 (478)
228 1zmd_A Dihydrolipoyl dehydroge 98.2 2.2E-06 7.6E-11 87.1 7.2 99 50-175 177-283 (474)
229 4a5l_A Thioredoxin reductase; 98.2 8.6E-06 2.9E-10 77.7 10.9 99 208-309 5-123 (314)
230 3c4n_A Uncharacterized protein 98.2 6E-07 2E-11 89.3 2.7 35 50-87 35-71 (405)
231 2a8x_A Dihydrolipoyl dehydroge 98.2 2E-06 7E-11 87.1 6.7 98 50-175 170-272 (464)
232 3s5w_A L-ornithine 5-monooxyge 98.2 4.2E-06 1.4E-10 84.7 8.9 102 209-310 32-195 (463)
233 1xdi_A RV3303C-LPDA; reductase 98.2 4E-06 1.4E-10 85.7 8.8 99 50-176 181-281 (499)
234 3ces_A MNMG, tRNA uridine 5-ca 98.1 1.5E-05 5.1E-10 82.6 12.9 99 208-308 29-182 (651)
235 2bc0_A NADH oxidase; flavoprot 98.1 3.4E-06 1.2E-10 86.0 8.1 98 50-175 193-292 (490)
236 1y56_B Sarcosine oxidase; dehy 98.1 1.6E-05 5.3E-10 78.2 12.6 61 253-316 153-213 (382)
237 3oc4_A Oxidoreductase, pyridin 98.1 4.3E-06 1.5E-10 84.4 8.7 101 208-310 3-118 (452)
238 2h88_A Succinate dehydrogenase 98.1 3E-06 1E-10 88.5 7.5 35 50-87 17-51 (621)
239 2zxi_A TRNA uridine 5-carboxym 98.1 1.6E-05 5.4E-10 82.1 12.7 99 208-308 28-181 (637)
240 3cgv_A Geranylgeranyl reductas 98.1 1.5E-05 5E-10 78.7 12.1 107 208-317 5-170 (397)
241 2qae_A Lipoamide, dihydrolipoy 98.1 3.2E-06 1.1E-10 85.7 7.3 98 50-175 173-277 (468)
242 4hb9_A Similarities with proba 98.1 1.7E-05 5.8E-10 78.5 12.4 99 209-308 3-167 (412)
243 2dkh_A 3-hydroxybenzoate hydro 98.1 1.9E-06 6.4E-11 90.9 5.5 37 50-89 31-68 (639)
244 3r9u_A Thioredoxin reductase; 98.1 1E-05 3.6E-10 77.0 10.1 99 207-310 4-121 (315)
245 2r0c_A REBC; flavin adenine di 98.1 3.1E-06 1.1E-10 87.6 6.8 36 51-89 26-61 (549)
246 3atr_A Conserved archaeal prot 98.1 1.6E-05 5.6E-10 80.1 11.9 100 208-308 7-163 (453)
247 3iwa_A FAD-dependent pyridine 98.1 6.8E-06 2.3E-10 83.4 9.2 101 208-310 4-128 (472)
248 2cdu_A NADPH oxidase; flavoenz 98.1 4.1E-06 1.4E-10 84.5 7.5 99 50-175 148-248 (452)
249 3o0h_A Glutathione reductase; 98.1 5.9E-06 2E-10 84.1 8.6 98 50-175 190-289 (484)
250 2gmh_A Electron transfer flavo 98.1 3.1E-05 1.1E-09 80.5 14.2 111 208-318 36-230 (584)
251 2weu_A Tryptophan 5-halogenase 98.1 5E-06 1.7E-10 85.3 8.1 45 130-175 183-231 (511)
252 1dxl_A Dihydrolipoamide dehydr 98.1 2.6E-06 9E-11 86.4 5.8 98 50-175 176-280 (470)
253 3da1_A Glycerol-3-phosphate de 98.1 6.9E-06 2.4E-10 85.0 8.8 36 49-87 16-51 (561)
254 2bs2_A Quinol-fumarate reducta 98.1 4.4E-06 1.5E-10 87.9 7.3 36 50-88 4-39 (660)
255 1pj5_A N,N-dimethylglycine oxi 98.1 3.6E-06 1.2E-10 91.5 6.9 37 50-88 3-39 (830)
256 3ntd_A FAD-dependent pyridine 98.1 4.9E-06 1.7E-10 86.5 7.5 98 50-175 150-268 (565)
257 3cgb_A Pyridine nucleotide-dis 98.1 4E-06 1.4E-10 85.3 6.5 97 50-175 185-283 (480)
258 4gcm_A TRXR, thioredoxin reduc 98.1 3.6E-05 1.2E-09 73.3 12.7 98 209-310 8-119 (312)
259 3gyx_A Adenylylsulfate reducta 98.0 6.2E-06 2.1E-10 86.7 7.9 35 51-88 22-62 (662)
260 3i3l_A Alkylhalidase CMLS; fla 98.0 2.7E-05 9.1E-10 81.0 12.6 108 207-317 23-196 (591)
261 3cp8_A TRNA uridine 5-carboxym 98.0 2.3E-05 7.9E-10 81.2 11.8 101 206-308 20-175 (641)
262 3e1t_A Halogenase; flavoprotei 98.0 3.4E-05 1.2E-09 79.1 13.1 100 208-308 8-173 (512)
263 3ic9_A Dihydrolipoamide dehydr 98.0 6E-06 2.1E-10 84.2 7.3 97 50-175 173-275 (492)
264 3qj4_A Renalase; FAD/NAD(P)-bi 98.0 2.7E-05 9.3E-10 75.3 11.5 95 209-305 3-163 (342)
265 1zk7_A HGII, reductase, mercur 98.0 6.8E-06 2.3E-10 83.3 7.4 96 50-175 175-272 (467)
266 2uzz_A N-methyl-L-tryptophan o 98.0 4E-05 1.4E-09 74.9 12.7 54 251-307 151-204 (372)
267 2gjc_A Thiazole biosynthetic e 98.0 1E-05 3.4E-10 77.0 7.7 37 50-89 64-102 (326)
268 3ihg_A RDME; flavoenzyme, anth 98.0 3.8E-05 1.3E-09 79.2 12.5 99 208-307 6-183 (535)
269 4dna_A Probable glutathione re 98.0 8.7E-06 3E-10 82.4 7.5 97 50-175 169-269 (463)
270 3lad_A Dihydrolipoamide dehydr 98.0 8.7E-06 3E-10 82.7 7.5 98 50-175 179-281 (476)
271 3rp8_A Flavoprotein monooxygen 98.0 3.1E-05 1.1E-09 76.8 11.4 100 206-309 22-183 (407)
272 2vdc_G Glutamate synthase [NAD 98.0 5.6E-06 1.9E-10 83.4 5.6 90 206-306 121-218 (456)
273 2xdo_A TETX2 protein; tetracyc 98.0 2.5E-05 8.4E-10 77.3 10.1 100 207-308 26-183 (398)
274 3urh_A Dihydrolipoyl dehydroge 98.0 8.3E-06 2.8E-10 83.2 6.8 98 50-175 197-301 (491)
275 3fmw_A Oxygenase; mithramycin, 98.0 3.2E-05 1.1E-09 80.1 11.2 107 208-318 50-216 (570)
276 1m6i_A Programmed cell death p 98.0 1.1E-05 3.7E-10 82.3 7.4 101 51-175 180-283 (493)
277 2gjc_A Thiazole biosynthetic e 97.9 7E-05 2.4E-09 71.2 12.2 101 208-308 66-240 (326)
278 3dgh_A TRXR-1, thioredoxin red 97.9 9.2E-06 3.2E-10 82.7 6.3 97 50-175 186-290 (483)
279 2aqj_A Tryptophan halogenase, 97.9 0.00012 4.2E-09 75.4 14.9 56 253-309 169-224 (538)
280 3dk9_A Grase, GR, glutathione 97.9 9.4E-06 3.2E-10 82.5 6.2 98 50-175 186-294 (478)
281 3dgz_A Thioredoxin reductase 2 97.9 1.7E-05 5.9E-10 80.7 7.2 97 50-175 184-288 (488)
282 4at0_A 3-ketosteroid-delta4-5a 97.9 0.00011 3.7E-09 75.2 13.2 58 250-307 203-264 (510)
283 3l8k_A Dihydrolipoyl dehydroge 97.9 2.9E-05 9.9E-10 78.6 8.5 98 208-310 5-147 (466)
284 2qa2_A CABE, polyketide oxygen 97.8 0.00018 6E-09 73.4 14.2 100 206-307 11-166 (499)
285 3jsk_A Cypbp37 protein; octame 97.8 0.00011 3.9E-09 70.2 11.9 139 207-345 79-304 (344)
286 4gut_A Lysine-specific histone 97.8 6.9E-05 2.4E-09 80.1 11.5 38 49-89 334-371 (776)
287 4g6h_A Rotenone-insensitive NA 97.8 1.4E-05 4.9E-10 81.5 6.0 101 207-310 42-172 (502)
288 4gde_A UDP-galactopyranose mut 97.8 8.8E-06 3E-10 83.4 4.4 52 250-305 223-274 (513)
289 1pn0_A Phenol 2-monooxygenase; 97.8 1.1E-05 3.6E-10 85.4 4.7 35 51-88 8-47 (665)
290 3c96_A Flavin-containing monoo 97.8 8.8E-05 3E-09 73.6 11.2 98 208-308 5-170 (410)
291 2qa1_A PGAE, polyketide oxygen 97.8 0.00018 6.3E-09 73.2 13.2 100 206-307 10-165 (500)
292 3c4n_A Uncharacterized protein 97.8 4.5E-05 1.5E-09 75.6 8.0 63 251-317 174-246 (405)
293 1y56_A Hypothetical protein PH 97.8 3.4E-05 1.2E-09 78.6 7.0 100 207-309 108-221 (493)
294 1c0p_A D-amino acid oxidase; a 97.7 2.6E-05 9E-10 76.0 5.7 37 48-87 3-39 (363)
295 3i6d_A Protoporphyrinogen oxid 97.7 1.3E-05 4.5E-10 81.0 3.7 41 264-306 248-288 (470)
296 2oln_A NIKD protein; flavoprot 97.7 0.00027 9.2E-09 69.7 13.0 59 254-316 158-216 (397)
297 2weu_A Tryptophan 5-halogenase 97.7 0.00031 1.1E-08 71.8 13.4 55 253-308 177-231 (511)
298 3qfa_A Thioredoxin reductase 1 97.7 5.7E-05 2E-09 77.4 7.8 97 50-175 209-316 (519)
299 1pj5_A N,N-dimethylglycine oxi 97.7 0.00023 7.9E-09 77.3 12.9 63 251-316 153-215 (830)
300 3ka7_A Oxidoreductase; structu 97.7 0.00041 1.4E-08 69.0 13.6 50 256-307 203-252 (425)
301 2pyx_A Tryptophan halogenase; 97.7 0.00025 8.4E-09 72.9 12.1 55 253-308 179-234 (526)
302 3ihm_A Styrene monooxygenase A 97.7 2.9E-05 1E-09 77.7 4.9 35 50-87 21-55 (430)
303 1cjc_A Protein (adrenodoxin re 97.7 2.2E-05 7.5E-10 79.2 3.8 91 206-307 5-106 (460)
304 2e1m_A L-glutamate oxidase; L- 97.7 4.9E-05 1.7E-09 74.0 6.2 39 48-89 41-80 (376)
305 1gte_A Dihydropyrimidine dehyd 97.6 2.8E-05 9.5E-10 86.2 4.9 93 207-308 187-289 (1025)
306 3k30_A Histamine dehydrogenase 97.6 5.2E-05 1.8E-09 80.6 6.5 99 50-175 522-625 (690)
307 2gag_A Heterotetrameric sarcos 97.6 0.00023 7.8E-09 78.4 11.5 101 207-309 128-255 (965)
308 2b9w_A Putative aminooxidase; 97.6 5.8E-05 2E-09 75.3 6.2 54 250-306 204-257 (424)
309 3nks_A Protoporphyrinogen oxid 97.6 4.7E-05 1.6E-09 77.1 5.4 55 250-306 235-289 (477)
310 1lqt_A FPRA; NADP+ derivative, 97.6 1.9E-05 6.3E-10 79.6 2.3 89 207-306 3-107 (456)
311 2x8g_A Thioredoxin glutathione 97.6 0.00011 3.8E-09 76.8 8.2 97 50-175 285-396 (598)
312 1rsg_A FMS1 protein; FAD bindi 97.6 3.8E-05 1.3E-09 78.8 4.4 38 50-90 7-45 (516)
313 2yg5_A Putrescine oxidase; oxi 97.6 3.8E-05 1.3E-09 77.4 4.2 37 50-89 4-40 (453)
314 3ka7_A Oxidoreductase; structu 97.6 5.6E-05 1.9E-09 75.3 5.4 35 52-89 1-35 (425)
315 2bcg_G Secretory pathway GDP d 97.5 7.5E-05 2.5E-09 75.2 5.9 59 249-308 242-301 (453)
316 2qcu_A Aerobic glycerol-3-phos 97.5 0.00064 2.2E-08 69.3 12.8 60 251-313 151-215 (501)
317 1v0j_A UDP-galactopyranose mut 97.5 7.9E-05 2.7E-09 73.7 5.8 38 50-90 6-44 (399)
318 2jae_A L-amino acid oxidase; o 97.5 9E-05 3.1E-09 75.4 6.1 39 49-90 9-47 (489)
319 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00016 5.3E-09 76.7 8.1 87 207-310 373-470 (671)
320 3hdq_A UDP-galactopyranose mut 97.5 9E-05 3.1E-09 72.8 5.7 40 48-90 26-65 (397)
321 2wdq_A Succinate dehydrogenase 97.5 0.001 3.6E-08 69.0 14.1 52 255-306 149-205 (588)
322 2pyx_A Tryptophan halogenase; 97.5 8.2E-05 2.8E-09 76.5 5.2 44 131-175 186-234 (526)
323 3lov_A Protoporphyrinogen oxid 97.5 9.1E-05 3.1E-09 75.0 5.5 39 50-89 3-41 (475)
324 3da1_A Glycerol-3-phosphate de 97.5 0.00071 2.4E-08 69.9 12.2 61 254-316 175-240 (561)
325 2e5v_A L-aspartate oxidase; ar 97.5 0.00063 2.2E-08 68.7 11.5 97 209-308 1-177 (472)
326 3c4a_A Probable tryptophan hyd 97.4 0.00011 3.9E-09 72.1 5.1 35 52-89 1-37 (381)
327 4dsg_A UDP-galactopyranose mut 97.4 0.00014 4.9E-09 73.8 5.8 39 49-89 7-45 (484)
328 2ivd_A PPO, PPOX, protoporphyr 97.4 0.00012 4.1E-09 74.2 5.1 39 48-89 13-51 (478)
329 3g3e_A D-amino-acid oxidase; F 97.4 0.0001 3.4E-09 71.5 4.2 36 52-87 1-39 (351)
330 1sez_A Protoporphyrinogen oxid 97.3 0.00015 5.2E-09 74.0 5.3 38 50-90 12-49 (504)
331 2dkh_A 3-hydroxybenzoate hydro 97.3 0.001 3.4E-08 70.0 11.6 100 208-307 33-211 (639)
332 3c4a_A Probable tryptophan hyd 97.3 0.00016 5.6E-09 70.9 5.2 88 208-308 1-144 (381)
333 2bi7_A UDP-galactopyranose mut 97.3 0.00017 5.9E-09 70.8 5.3 37 51-90 3-39 (384)
334 2iid_A L-amino-acid oxidase; f 97.3 0.0002 6.8E-09 73.0 5.8 38 49-89 31-68 (498)
335 2vvm_A Monoamine oxidase N; FA 97.3 0.00017 6E-09 73.3 5.2 56 249-306 255-311 (495)
336 2xag_A Lysine-specific histone 97.3 7E-05 2.4E-09 80.7 1.9 39 49-90 276-314 (852)
337 3g5s_A Methylenetetrahydrofola 97.3 0.00025 8.5E-09 68.5 5.4 35 51-88 1-35 (443)
338 1o94_A Tmadh, trimethylamine d 97.3 0.00018 6.1E-09 76.9 4.8 98 50-175 527-647 (729)
339 1i8t_A UDP-galactopyranose mut 97.2 0.0002 7E-09 69.8 4.7 35 52-89 2-36 (367)
340 1kf6_A Fumarate reductase flav 97.2 0.0015 5E-08 68.1 11.3 97 208-305 6-195 (602)
341 2r0c_A REBC; flavin adenine di 97.1 0.0034 1.2E-07 64.7 12.5 95 208-307 27-196 (549)
342 1d5t_A Guanine nucleotide diss 97.1 0.00048 1.6E-08 68.8 5.8 59 248-308 233-291 (433)
343 1chu_A Protein (L-aspartate ox 97.1 0.0014 4.7E-08 67.4 9.2 33 208-241 9-41 (540)
344 2rgh_A Alpha-glycerophosphate 97.1 0.0058 2E-07 63.2 13.9 51 256-307 195-250 (571)
345 2rgh_A Alpha-glycerophosphate 97.1 0.00028 9.7E-09 73.1 3.9 35 50-87 31-65 (571)
346 2h88_A Succinate dehydrogenase 97.0 0.0042 1.4E-07 64.7 12.1 51 256-307 162-217 (621)
347 3p1w_A Rabgdi protein; GDI RAB 97.0 0.00055 1.9E-08 68.7 5.2 59 248-306 255-313 (475)
348 4gde_A UDP-galactopyranose mut 96.9 0.0011 3.7E-08 67.6 7.0 32 209-240 12-44 (513)
349 1jnr_A Adenylylsulfate reducta 96.9 0.00048 1.7E-08 72.4 4.2 36 50-88 21-60 (643)
350 2z3y_A Lysine-specific histone 96.9 0.00091 3.1E-08 70.6 6.1 38 49-89 105-142 (662)
351 2bs2_A Quinol-fumarate reducta 96.9 0.0078 2.7E-07 63.1 12.8 51 255-306 164-219 (660)
352 3ayj_A Pro-enzyme of L-phenyla 96.8 0.00056 1.9E-08 71.8 3.4 39 51-89 56-100 (721)
353 1pn0_A Phenol 2-monooxygenase; 96.7 0.0076 2.6E-07 63.5 11.7 32 208-239 9-45 (665)
354 4gut_A Lysine-specific histone 96.7 0.012 4.1E-07 62.8 12.8 42 262-305 542-583 (776)
355 3i6d_A Protoporphyrinogen oxid 96.6 0.011 3.9E-07 59.1 11.8 35 208-242 6-46 (470)
356 1b37_A Protein (polyamine oxid 96.6 0.0018 6.3E-08 65.3 5.6 41 263-305 228-268 (472)
357 1jnr_A Adenylylsulfate reducta 96.6 0.016 5.5E-07 60.7 12.5 49 258-306 160-217 (643)
358 1kdg_A CDH, cellobiose dehydro 96.5 0.0018 6.3E-08 66.6 5.1 64 254-318 201-272 (546)
359 1ju2_A HydroxynitrIle lyase; f 96.5 0.001 3.5E-08 68.3 3.0 59 259-317 204-271 (536)
360 3t37_A Probable dehydrogenase; 96.3 0.0024 8.1E-08 65.5 4.0 58 260-318 222-282 (526)
361 3q9t_A Choline dehydrogenase a 96.2 0.0025 8.6E-08 65.8 4.0 58 260-317 217-280 (577)
362 3gyx_A Adenylylsulfate reducta 96.2 0.016 5.4E-07 60.8 9.8 51 255-305 172-231 (662)
363 4b63_A L-ornithine N5 monooxyg 96.1 0.027 9.4E-07 57.1 11.2 61 250-310 146-217 (501)
364 4g65_A TRK system potassium up 96.1 0.022 7.5E-07 57.0 10.1 34 51-87 3-36 (461)
365 3kkj_A Amine oxidase, flavin-c 96.0 0.0061 2.1E-07 55.8 5.3 34 209-242 4-37 (336)
366 3qvp_A Glucose oxidase; oxidor 96.0 0.004 1.4E-07 64.2 4.1 66 252-317 230-303 (583)
367 1n4w_A CHOD, cholesterol oxida 96.0 0.0055 1.9E-07 62.3 5.0 58 259-316 231-297 (504)
368 3lk7_A UDP-N-acetylmuramoylala 95.9 0.0084 2.9E-07 60.0 5.7 82 206-312 8-89 (451)
369 1coy_A Cholesterol oxidase; ox 95.8 0.0069 2.4E-07 61.7 5.0 63 254-316 232-302 (507)
370 3p1w_A Rabgdi protein; GDI RAB 95.8 0.019 6.3E-07 57.6 7.8 40 48-90 17-56 (475)
371 1gpe_A Protein (glucose oxidas 95.7 0.0073 2.5E-07 62.6 4.7 64 254-317 236-307 (587)
372 2jbv_A Choline oxidase; alcoho 95.7 0.007 2.4E-07 62.2 4.3 64 254-317 214-283 (546)
373 3fwz_A Inner membrane protein 95.6 0.013 4.6E-07 48.1 5.2 37 48-87 4-40 (140)
374 3eag_A UDP-N-acetylmuramate:L- 95.5 0.016 5.6E-07 55.2 6.1 81 206-313 3-84 (326)
375 3fim_B ARYL-alcohol oxidase; A 95.5 0.0057 1.9E-07 63.0 2.9 67 251-317 210-286 (566)
376 4dgk_A Phytoene dehydrogenase; 95.4 0.011 3.9E-07 59.9 4.7 37 208-244 2-38 (501)
377 3dfz_A SIRC, precorrin-2 dehyd 95.4 0.015 5.2E-07 51.8 4.9 107 206-344 30-141 (223)
378 1id1_A Putative potassium chan 95.2 0.026 8.8E-07 47.1 5.6 34 50-86 2-35 (153)
379 3eag_A UDP-N-acetylmuramate:L- 95.1 0.054 1.9E-06 51.5 8.1 35 50-87 3-38 (326)
380 2g1u_A Hypothetical protein TM 95.0 0.028 9.4E-07 47.0 5.2 36 49-87 17-52 (155)
381 3llv_A Exopolyphosphatase-rela 95.0 0.023 7.7E-07 46.6 4.6 34 51-87 6-39 (141)
382 3ic5_A Putative saccharopine d 94.4 0.039 1.3E-06 43.3 4.4 33 51-86 5-38 (118)
383 3i83_A 2-dehydropantoate 2-red 94.4 0.19 6.5E-06 47.5 10.0 85 208-315 3-91 (320)
384 1lss_A TRK system potassium up 94.3 0.048 1.6E-06 44.3 5.0 32 52-86 5-36 (140)
385 2iid_A L-amino-acid oxidase; f 94.1 0.064 2.2E-06 54.2 6.3 40 206-245 32-71 (498)
386 3nrn_A Uncharacterized protein 93.9 0.058 2E-06 53.2 5.4 35 208-242 1-35 (421)
387 3dfz_A SIRC, precorrin-2 dehyd 93.8 0.062 2.1E-06 47.8 4.9 36 48-86 28-63 (223)
388 3fpz_A Thiazole biosynthetic e 93.5 0.044 1.5E-06 52.1 3.7 65 207-271 65-138 (326)
389 1vg0_A RAB proteins geranylger 93.5 0.08 2.7E-06 54.9 5.8 61 248-308 377-438 (650)
390 3c85_A Putative glutathione-re 93.4 0.08 2.7E-06 45.5 4.9 36 49-87 37-73 (183)
391 3ihm_A Styrene monooxygenase A 93.4 0.068 2.3E-06 53.0 5.0 33 208-240 23-55 (430)
392 3dme_A Conserved exported prot 93.3 0.084 2.9E-06 50.7 5.4 34 208-241 5-38 (369)
393 3k7m_X 6-hydroxy-L-nicotine ox 93.2 0.084 2.9E-06 52.2 5.4 34 209-242 3-36 (431)
394 2hmt_A YUAA protein; RCK, KTN, 93.2 0.089 3E-06 42.8 4.6 34 51-87 6-39 (144)
395 3nks_A Protoporphyrinogen oxid 93.1 0.084 2.9E-06 52.9 5.3 35 208-242 3-39 (477)
396 4hv4_A UDP-N-acetylmuramate--L 93.1 0.097 3.3E-06 52.9 5.7 78 205-312 20-98 (494)
397 2x5o_A UDP-N-acetylmuramoylala 93.1 0.04 1.4E-06 54.9 2.8 79 206-313 4-82 (439)
398 3fwz_A Inner membrane protein 93.1 0.23 7.9E-06 40.5 7.0 77 207-307 7-83 (140)
399 4gx0_A TRKA domain protein; me 93.0 0.33 1.1E-05 49.9 9.7 164 48-245 124-386 (565)
400 2b9w_A Putative aminooxidase; 93.0 0.11 3.8E-06 51.2 5.8 61 206-267 5-82 (424)
401 2e1m_A L-glutamate oxidase; L- 93.0 0.12 4.1E-06 50.1 5.8 37 206-242 43-80 (376)
402 3g5s_A Methylenetetrahydrofola 92.9 0.12 4E-06 50.1 5.5 33 208-240 2-34 (443)
403 1rsg_A FMS1 protein; FAD bindi 92.8 0.11 3.7E-06 52.9 5.6 36 207-242 8-44 (516)
404 1f0y_A HCDH, L-3-hydroxyacyl-C 92.8 0.12 4.2E-06 48.4 5.6 39 46-87 10-48 (302)
405 3nix_A Flavoprotein/dehydrogen 92.6 0.11 3.7E-06 51.1 5.2 33 208-240 6-38 (421)
406 1s3e_A Amine oxidase [flavin-c 92.5 0.12 4.3E-06 52.4 5.6 61 207-268 4-81 (520)
407 2x5o_A UDP-N-acetylmuramoylala 92.5 0.096 3.3E-06 52.1 4.6 130 50-236 4-136 (439)
408 2gf3_A MSOX, monomeric sarcosi 92.5 0.12 4E-06 50.2 5.2 33 209-241 5-37 (389)
409 1kyq_A Met8P, siroheme biosynt 92.5 0.068 2.3E-06 49.2 3.2 36 49-87 11-46 (274)
410 3hwr_A 2-dehydropantoate 2-red 92.5 0.32 1.1E-05 45.9 8.0 88 206-315 18-106 (318)
411 2ivd_A PPO, PPOX, protoporphyr 92.5 0.13 4.5E-06 51.5 5.6 38 205-242 14-51 (478)
412 2jae_A L-amino acid oxidase; o 92.4 0.14 4.8E-06 51.5 5.7 39 206-244 10-48 (489)
413 2vvm_A Monoamine oxidase N; FA 92.3 0.27 9.1E-06 49.5 7.7 36 51-89 39-74 (495)
414 4ffl_A PYLC; amino acid, biosy 92.3 0.15 5.2E-06 49.1 5.7 37 51-90 1-37 (363)
415 3lk7_A UDP-N-acetylmuramoylala 92.3 0.13 4.5E-06 51.3 5.3 134 49-235 7-143 (451)
416 1c0p_A D-amino acid oxidase; a 92.3 0.14 4.6E-06 49.3 5.2 33 207-239 6-38 (363)
417 3nyc_A D-arginine dehydrogenas 92.2 0.12 4E-06 50.0 4.7 36 206-242 8-43 (381)
418 3l4b_C TRKA K+ channel protien 92.2 0.11 3.9E-06 46.0 4.3 32 53-87 2-33 (218)
419 3llv_A Exopolyphosphatase-rela 92.0 0.39 1.3E-05 39.0 7.1 33 207-239 6-38 (141)
420 2g1u_A Hypothetical protein TM 92.0 0.21 7.2E-06 41.5 5.5 37 205-241 17-53 (155)
421 2bcg_G Secretory pathway GDP d 91.9 0.27 9.1E-06 49.0 7.1 38 50-90 10-47 (453)
422 1vg0_A RAB proteins geranylger 91.9 0.47 1.6E-05 49.2 8.9 39 49-90 6-44 (650)
423 3hn7_A UDP-N-acetylmuramate-L- 91.9 0.19 6.6E-06 51.1 6.0 80 205-312 17-97 (524)
424 2bi7_A UDP-galactopyranose mut 91.8 0.19 6.4E-06 49.0 5.6 36 208-243 4-39 (384)
425 3hn2_A 2-dehydropantoate 2-red 91.8 0.28 9.6E-06 46.1 6.7 85 208-314 3-88 (312)
426 1sez_A Protoporphyrinogen oxid 91.5 0.19 6.4E-06 50.8 5.5 38 206-243 12-49 (504)
427 2yg5_A Putrescine oxidase; oxi 91.5 0.2 6.8E-06 49.8 5.6 35 208-242 6-40 (453)
428 3hdq_A UDP-galactopyranose mut 91.5 0.2 6.9E-06 48.8 5.4 37 207-243 29-65 (397)
429 3dje_A Fructosyl amine: oxygen 91.3 0.21 7.2E-06 49.4 5.5 35 207-241 6-41 (438)
430 2a9f_A Putative malic enzyme ( 91.3 0.21 7.1E-06 48.1 5.1 37 49-87 186-222 (398)
431 1d5t_A Guanine nucleotide diss 91.2 0.21 7.1E-06 49.5 5.4 39 49-90 4-42 (433)
432 4e12_A Diketoreductase; oxidor 91.2 0.24 8.3E-06 45.8 5.5 35 50-87 3-37 (283)
433 1vl6_A Malate oxidoreductase; 91.2 0.22 7.4E-06 47.9 5.1 37 49-87 190-226 (388)
434 2gag_B Heterotetrameric sarcos 91.2 0.16 5.5E-06 49.5 4.5 33 208-240 22-56 (405)
435 1y6j_A L-lactate dehydrogenase 91.1 0.23 7.9E-06 46.9 5.3 37 50-87 6-42 (318)
436 3ego_A Probable 2-dehydropanto 91.1 0.52 1.8E-05 44.2 7.8 72 209-303 4-75 (307)
437 1id1_A Putative potassium chan 90.9 0.34 1.2E-05 40.1 5.6 33 207-239 3-35 (153)
438 3k96_A Glycerol-3-phosphate de 90.9 0.24 8.2E-06 47.6 5.2 39 46-87 24-62 (356)
439 1pzg_A LDH, lactate dehydrogen 90.9 0.29 1E-05 46.5 5.8 37 49-87 7-43 (331)
440 4dio_A NAD(P) transhydrogenase 90.9 0.26 8.9E-06 47.9 5.4 34 51-87 190-223 (405)
441 1v0j_A UDP-galactopyranose mut 90.8 0.2 7E-06 49.0 4.8 36 207-242 7-43 (399)
442 3tl2_A Malate dehydrogenase; c 90.8 0.28 9.6E-06 46.2 5.5 37 48-86 5-41 (315)
443 3ps9_A TRNA 5-methylaminomethy 90.8 0.23 7.8E-06 52.3 5.4 35 208-242 273-307 (676)
444 3pvc_A TRNA 5-methylaminomethy 90.7 0.23 7.8E-06 52.5 5.4 35 208-242 265-299 (689)
445 3pqe_A L-LDH, L-lactate dehydr 90.7 0.3 1E-05 46.2 5.6 37 49-86 3-39 (326)
446 3g3e_A D-amino-acid oxidase; F 90.7 0.17 5.7E-06 48.4 4.0 32 209-240 2-39 (351)
447 2ew2_A 2-dehydropantoate 2-red 90.7 0.3 1E-05 45.8 5.7 32 208-239 4-35 (316)
448 1jw9_B Molybdopterin biosynthe 90.7 0.25 8.7E-06 44.8 4.9 36 51-88 31-66 (249)
449 1pjq_A CYSG, siroheme synthase 90.4 0.33 1.1E-05 48.4 5.9 78 206-311 11-89 (457)
450 2e4g_A Tryptophan halogenase; 90.4 0.28 9.4E-06 50.3 5.5 34 207-240 25-61 (550)
451 1i8t_A UDP-galactopyranose mut 90.4 0.25 8.7E-06 47.6 5.0 34 209-242 3-36 (367)
452 3i83_A 2-dehydropantoate 2-red 90.2 0.3 1E-05 46.2 5.2 33 51-86 2-34 (320)
453 3lov_A Protoporphyrinogen oxid 90.2 0.23 7.9E-06 49.7 4.7 34 208-241 5-40 (475)
454 3p2y_A Alanine dehydrogenase/p 90.1 0.28 9.6E-06 47.2 4.9 35 50-87 183-217 (381)
455 3d0o_A L-LDH 1, L-lactate dehy 90.0 0.36 1.2E-05 45.6 5.5 37 49-86 4-40 (317)
456 2z3y_A Lysine-specific histone 89.9 0.34 1.2E-05 50.8 5.9 37 206-242 106-142 (662)
457 3fi9_A Malate dehydrogenase; s 89.9 0.41 1.4E-05 45.6 5.8 36 50-86 7-43 (343)
458 3gvi_A Malate dehydrogenase; N 89.8 0.39 1.3E-05 45.3 5.6 38 48-87 4-41 (324)
459 2xag_A Lysine-specific histone 89.6 0.37 1.3E-05 51.9 5.9 36 207-242 278-313 (852)
460 3ghy_A Ketopantoate reductase 89.6 0.64 2.2E-05 44.2 7.0 77 208-306 4-81 (335)
461 1bg6_A N-(1-D-carboxylethyl)-L 89.3 0.37 1.3E-05 46.1 5.2 33 51-86 4-36 (359)
462 1lss_A TRK system potassium up 89.3 0.48 1.6E-05 38.1 5.2 33 207-239 4-36 (140)
463 3gpi_A NAD-dependent epimerase 89.3 0.43 1.5E-05 44.0 5.4 34 51-87 3-36 (286)
464 3hn2_A 2-dehydropantoate 2-red 89.1 0.33 1.1E-05 45.6 4.6 32 52-86 3-34 (312)
465 3axb_A Putative oxidoreductase 89.1 0.26 9E-06 48.9 4.1 31 208-238 24-55 (448)
466 4huj_A Uncharacterized protein 89.1 0.29 9.9E-06 43.4 3.9 35 49-86 21-56 (220)
467 3ghy_A Ketopantoate reductase 89.1 0.42 1.4E-05 45.5 5.3 33 51-86 3-35 (335)
468 4dsg_A UDP-galactopyranose mut 89.0 0.46 1.6E-05 47.7 5.8 37 206-242 8-45 (484)
469 2ew2_A 2-dehydropantoate 2-red 89.0 0.4 1.4E-05 44.9 5.1 32 52-86 4-35 (316)
470 3rui_A Ubiquitin-like modifier 89.0 0.46 1.6E-05 45.0 5.3 37 50-88 33-69 (340)
471 1ldn_A L-lactate dehydrogenase 88.7 0.54 1.8E-05 44.3 5.7 36 50-86 5-40 (316)
472 3ic5_A Putative saccharopine d 88.6 0.43 1.5E-05 37.0 4.3 33 207-239 5-38 (118)
473 1zud_1 Adenylyltransferase THI 88.6 0.43 1.5E-05 43.3 4.8 37 50-88 27-63 (251)
474 1pjq_A CYSG, siroheme synthase 88.5 0.39 1.3E-05 47.8 4.8 36 49-87 10-45 (457)
475 3pid_A UDP-glucose 6-dehydroge 88.4 0.36 1.2E-05 47.5 4.4 34 50-87 35-68 (432)
476 3h8v_A Ubiquitin-like modifier 88.3 0.42 1.4E-05 44.3 4.6 37 50-88 35-71 (292)
477 2hmt_A YUAA protein; RCK, KTN, 88.3 0.55 1.9E-05 37.9 4.9 33 207-239 6-38 (144)
478 1x13_A NAD(P) transhydrogenase 88.3 0.48 1.6E-05 46.3 5.2 34 51-87 172-205 (401)
479 3p7m_A Malate dehydrogenase; p 88.2 0.62 2.1E-05 43.9 5.7 37 49-87 3-39 (321)
480 1lld_A L-lactate dehydrogenase 88.2 0.54 1.9E-05 44.2 5.4 36 51-87 7-42 (319)
481 1kyq_A Met8P, siroheme biosynt 87.9 0.35 1.2E-05 44.4 3.7 34 206-239 12-45 (274)
482 3l9w_A Glutathione-regulated p 87.9 0.43 1.5E-05 46.8 4.6 34 51-87 4-37 (413)
483 2uyy_A N-PAC protein; long-cha 87.9 0.61 2.1E-05 43.8 5.6 34 50-86 29-62 (316)
484 3ius_A Uncharacterized conserv 87.9 0.43 1.5E-05 43.9 4.4 33 51-86 5-37 (286)
485 2dpo_A L-gulonate 3-dehydrogen 87.8 0.47 1.6E-05 44.7 4.7 35 50-87 5-39 (319)
486 1l7d_A Nicotinamide nucleotide 87.7 0.6 2E-05 45.3 5.5 35 50-87 171-205 (384)
487 3ado_A Lambda-crystallin; L-gu 87.7 0.5 1.7E-05 44.4 4.7 35 50-87 5-39 (319)
488 3g17_A Similar to 2-dehydropan 87.7 0.44 1.5E-05 44.3 4.4 33 51-86 2-34 (294)
489 3c24_A Putative oxidoreductase 87.6 0.7 2.4E-05 42.7 5.7 33 51-86 11-44 (286)
490 1kjq_A GART 2, phosphoribosylg 87.6 0.62 2.1E-05 45.2 5.5 40 46-88 6-45 (391)
491 3ado_A Lambda-crystallin; L-gu 87.6 0.51 1.7E-05 44.4 4.7 38 206-243 5-42 (319)
492 3i6i_A Putative leucoanthocyan 87.5 0.56 1.9E-05 44.6 5.1 36 49-87 8-44 (346)
493 2raf_A Putative dinucleotide-b 87.5 0.66 2.3E-05 40.7 5.2 35 50-87 18-52 (209)
494 3e8x_A Putative NAD-dependent 87.4 0.59 2E-05 41.6 4.9 36 48-86 18-54 (236)
495 3phh_A Shikimate dehydrogenase 87.2 0.72 2.5E-05 42.2 5.3 33 51-86 118-150 (269)
496 3ggo_A Prephenate dehydrogenas 87.1 0.82 2.8E-05 43.0 5.9 36 50-86 32-67 (314)
497 3dhn_A NAD-dependent epimerase 87.0 0.58 2E-05 41.3 4.6 34 51-87 4-38 (227)
498 2v6b_A L-LDH, L-lactate dehydr 86.9 0.7 2.4E-05 43.2 5.3 35 52-87 1-35 (304)
499 3gg2_A Sugar dehydrogenase, UD 86.9 0.64 2.2E-05 46.2 5.2 33 52-87 3-35 (450)
500 3vku_A L-LDH, L-lactate dehydr 86.9 0.78 2.7E-05 43.3 5.5 37 49-86 7-43 (326)
No 1
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=3.1e-58 Score=464.47 Aligned_cols=396 Identities=29% Similarity=0.506 Sum_probs=349.2
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHh
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (488)
+++++|||||||+||++||.+|++.|+ +.+|+|||++++.+|.+|++++.++.... ....+ .....+
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~~~~~~-~~~~~-----------~~~~~~ 73 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGF-EGRVLVIGREPEIPYERPPLSKEYLAREK-TFERI-----------CIRPAQ 73 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC-CSCEEEEESSSSCCBCSGGGGTTTTTTSS-CSGGG-----------BSSCHH
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCc-CCCEEEEecCCCCCcCcccCCHHHHcCCC-CHHHh-----------ccCCHH
Confidence 346799999999999999999999997 56799999999999999988875554321 11111 245678
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhc-C
Q 011322 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK-A 207 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~-~ 207 (488)
++.+.+++++.+++|+.++++.+.+.+.+++.+.||+||+|||+.+. .++++|.+.++++++++..++..+...+.. +
T Consensus 74 ~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~-~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~ 152 (415)
T 3lxd_A 74 FWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPR-RLSCVGADLAGVHAVRTKEDADRLMAELDAGA 152 (415)
T ss_dssp HHHHTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECC-CCBTTSSCCBTEECCCSHHHHHHHHHHHHTTC
T ss_pred HHHHCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccC-CCCCCCccccCEEEEcCHHHHHHHHHHhhhcC
Confidence 89999999999999999999999999999999999999999999886 456677777889999999999888887777 9
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 287 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~ 287 (488)
++++|||+|++|+|+|..+.+.|.+|+++++.++++++.+++.+.+.+.+.+++.||++++++.|++++.+ ++.+..|.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~ 231 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVR 231 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEE
Confidence 99999999999999999999999999999999999998889999999999999999999999999999854 56777899
Q ss_pred eCCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccC-CcccccccHHHHHHH
Q 011322 288 LEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY-DRTARVEHVDHARQS 366 (488)
Q Consensus 288 ~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~-~~~~~~~~~~~A~~~ 366 (488)
+++|++++||.||+|+|.+|++++++.+|+..+ ++|.||++++|+.|+|||+|||+..+.... |...+.++|..|..|
T Consensus 232 l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~q 310 (415)
T 3lxd_A 232 MQDGSVIPADIVIVGIGIVPCVGALISAGASGG-NGVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDM 310 (415)
T ss_dssp ESSSCEEECSEEEECSCCEESCHHHHHTTCCCS-SSEECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHH
T ss_pred eCCCCEEEcCEEEECCCCccChHHHHhCCCCcC-CCEEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHH
Confidence 999999999999999999999999999999987 469999999999999999999999887666 777788899999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCceeEeccccCCCCcceeeeEeeCCCC--cEEEEccCC-CcEEEEEEECCEEEEEEeecCC
Q 011322 367 AQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGS 443 (488)
Q Consensus 367 g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~ 443 (488)
|+.+|+||++. ..+|..+||||+++|+.. ++++|...+ +.+..++.+ .+|.+||+++|+|+|+++ +|+
T Consensus 311 g~~aa~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 381 (415)
T 3lxd_A 311 ATAAAKDICGA-PVPYKATPWFWSNQYDLK-------LQTVGLSTGHDNAVLRGDPATRSFSVVYLKGGKVVALDC-VNM 381 (415)
T ss_dssp HHHHHHHHTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCSEEEEEEEGGGTEEEEEEEETTEEEEEEE-ESC
T ss_pred HHHHHHHhcCC-CCCCCCCCeeEeeeCCcE-------EEEEeCCCCCCEEEEEecCCCCeEEEEEEECCEEEEEEE-ECC
Confidence 99999999974 457999999999999864 888997643 556667664 679999999999999986 899
Q ss_pred hHHhhHHHHHHhcCCCCChhhhcCCC
Q 011322 444 PEEFQLLPTLARSQPFVDKAKLQQAS 469 (488)
Q Consensus 444 ~~~~~~~~~l~~~~~~~~~~~~~~~~ 469 (488)
+.....+++||.++..+++..+.++.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 407 (415)
T 3lxd_A 382 VKDYVQGKKLVEARAQIAPEQLADAG 407 (415)
T ss_dssp HHHHHHHHHHHHHTCCCCHHHHTCTT
T ss_pred hHHHHHHHHHHHCCCCCCHHHhcCCC
Confidence 99999999999999999988887664
No 2
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.4e-58 Score=459.90 Aligned_cols=393 Identities=29% Similarity=0.479 Sum_probs=348.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
+++|||||||+||++||.+|++.|+ +.+|+|||++++.+|++|++++.++.... ....+ .....+++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~l~~~~-~~~~~-----------~~~~~~~~ 67 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKY-PGRIALINDEKHLPYQRPPLSKAYLKSGG-DPNSL-----------MFRPEKFF 67 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CSCEEEECCSSSSSBCSGGGGTGGGGSCC-CTTSS-----------BSSCHHHH
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCc-CCCEEEEeCCCCCCCCCccCCHHHHCCCC-CHHHc-----------cCCCHHHH
Confidence 3689999999999999999999997 67899999999999999999876654322 12221 24567889
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeE
Q 011322 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 210 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v 210 (488)
.+.+++++. ++|+.++++.+.+++.+|+++.||+||+|||+.+. .|++++.+.++++++++..+...+...+..++++
T Consensus 68 ~~~~i~~~~-~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~-~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~v 145 (404)
T 3fg2_P 68 QDQAIELIS-DRMVSIDREGRKLLLASGTAIEYGHLVLATGARNR-MLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHV 145 (404)
T ss_dssp HHTTEEEEC-CCEEEEETTTTEEEESSSCEEECSEEEECCCEEEC-CCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEE
T ss_pred HhCCCEEEE-EEEEEEECCCCEEEECCCCEEECCEEEEeeCCCcc-CCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeE
Confidence 999999998 89999999999999999999999999999999876 4566777788999999999999988888889999
Q ss_pred EEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC
Q 011322 211 VVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 290 (488)
Q Consensus 211 vVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~ 290 (488)
+|||+|++|+|+|..+.+.|.+|+++++.++++++.+++.+.+.+.+.+++.||++++++.|++++.+ ++.+..|.+++
T Consensus 146 vViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~d 224 (404)
T 3fg2_P 146 VVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSD 224 (404)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT
T ss_pred EEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCC
Confidence 99999999999999999999999999999999998889999999999999999999999999999854 46677899999
Q ss_pred CcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHH
Q 011322 291 GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHC 370 (488)
Q Consensus 291 g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~ 370 (488)
|++++||.||+|+|++|+.++++.+|+..++ +|.||++++|+.|+|||+|||+..+....|...+.++|..|..||+.+
T Consensus 225 G~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~-Gi~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~a 303 (404)
T 3fg2_P 225 GNTLPCDLVVVGVGVIPNVEIAAAAGLPTAA-GIIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCV 303 (404)
T ss_dssp SCEEECSEEEECCCEEECCHHHHHTTCCBSS-SEEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHH
T ss_pred CCEEEcCEEEECcCCccCHHHHHhCCCCCCC-CEEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHH
Confidence 9999999999999999999999999999885 599999999999999999999998877777777888999999999999
Q ss_pred HHHHhcCCCCCCCCCCceeEeccccCCCCcceeeeEeeCCCC--cEEEEccCC-CcEEEEEEECCEEEEEEeecCChHHh
Q 011322 371 IKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEEF 447 (488)
Q Consensus 371 a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 447 (488)
|++|++. ..+|..+||||+++|+.. +++.|...+ +.+..++.+ .+|.++|+++|+|+|+++ .|++...
T Consensus 304 a~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~ 374 (404)
T 3fg2_P 304 AARLTGD-AKPYDGYPWFWSDQGDDK-------LQIVGLTAGFDQVVIRGSVAERSFSAFCYKAGKLIGIES-VNRAADH 374 (404)
T ss_dssp HHHTTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCCEEEEEEETTTTEEEEEEEETTEEEEEEE-ESCHHHH
T ss_pred HHHhCCC-CCCCCCCCceEeEECCcE-------EEEEeCCCCCCEEEEEecCCCCcEEEEEEECCEEEEEEE-eCCHHHH
Confidence 9999974 467899999999999864 888887643 566677664 679999999999999986 7999999
Q ss_pred hHHHHHHhcCCCCChhhhcCCC
Q 011322 448 QLLPTLARSQPFVDKAKLQQAS 469 (488)
Q Consensus 448 ~~~~~l~~~~~~~~~~~~~~~~ 469 (488)
..+++||+++..+++..+.++.
T Consensus 375 ~~~~~~~~~~~~~~~~~l~~~~ 396 (404)
T 3fg2_P 375 VFGRKILPLDKSVTPEQAADLS 396 (404)
T ss_dssp HHHHHHTTTTCCCCHHHHHCTT
T ss_pred HHHHHHHHcCCCCCHHHhcCCC
Confidence 9999999999999988887664
No 3
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=6e-58 Score=461.09 Aligned_cols=391 Identities=27% Similarity=0.447 Sum_probs=342.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
+++|||||||+||++||.+|++.|+ +.+|+|||++++++|++|++++.++..... ...+ ....+++
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~-~~~V~li~~~~~~~y~~~~l~~~~~~g~~~-~~~~------------~~~~~~~ 67 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGF-EGRISLIGDEPHLPYDRPSLSKAVLDGSLE-RPPI------------LAEADWY 67 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEECSSSSSBCSGGGGTHHHHTSSS-SCCB------------SSCTTHH
T ss_pred CCCEEEEcccHHHHHHHHHHHccCc-CCeEEEEECCCCCCcCCccccHHHhCCCCC-HHHh------------cCCHHHH
Confidence 3599999999999999999999997 667999999999999999988755432211 1111 2346788
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeE
Q 011322 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 210 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v 210 (488)
++.+++++.+++|+.++++.++|++.+|+++.||+||||||+.|. .|+++|.+.++++++++..+...+.+.+..++++
T Consensus 68 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~-~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~v 146 (410)
T 3ef6_A 68 GEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRAR-TMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRL 146 (410)
T ss_dssp HHTTCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-CCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEE
T ss_pred HHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCccc-CCCCCCccccceEEeccHHHHHHHHHHhccCCeE
Confidence 899999999999999999999999999999999999999999986 4567787788999999999998888877789999
Q ss_pred EEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC
Q 011322 211 VVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 290 (488)
Q Consensus 211 vVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~ 290 (488)
+|||+|++|+|+|..|.+.|.+|+++++.++++++.+++.+.+.+.+.+++.||++++++.|++++.+ +.+..|.+++
T Consensus 147 vViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~d 224 (410)
T 3ef6_A 147 LIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASD 224 (410)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETT
T ss_pred EEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECC
Confidence 99999999999999999999999999999999988789999999999999999999999999999853 3455789999
Q ss_pred CcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHH
Q 011322 291 GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHC 370 (488)
Q Consensus 291 g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~ 370 (488)
|++++||.||+|+|.+|+.++++++|+..+ ++|.||++++|+.|+|||+|||+..+... |...+.++|..|..||+.+
T Consensus 225 g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~a 302 (410)
T 3ef6_A 225 GRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGATLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAV 302 (410)
T ss_dssp SCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHH
T ss_pred CCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCeeECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHH
Confidence 999999999999999999999999999988 56999999999999999999999987765 6666788999999999999
Q ss_pred HHHHhcCCCCCCCCCCceeEeccccCCCCcceeeeEeeCCCC--cEEEEccCC-CcEEEEEEECCEEEEEEeecCChHHh
Q 011322 371 IKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEEF 447 (488)
Q Consensus 371 a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 447 (488)
|++|++. ..+|..+||||+++|++. +++.|...+ +.+..++.+ ..|.+||+++|+|+|+++ .|++...
T Consensus 303 a~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~~ 373 (410)
T 3ef6_A 303 AAAILGK-NVSAPQLPVSWTEIAGHR-------MQMAGDIEGPGDFVSRGMPGSGAALLFRLQERRIQAVVA-VDAPRDF 373 (410)
T ss_dssp HHHHTTC-CCCCCBCCEEEEEETTEE-------EEEESCSSSSSEEEEESCTTSSSEEEEEEETTEEEEEEE-ESCHHHH
T ss_pred HHHHcCC-CCCCCCCCeeEEEECCce-------EEEEcCCCCCCEEEEEeeCCCCeEEEEEEECCEEEEEEE-ECChHHH
Confidence 9999974 467889999999999864 788887643 566677765 568999999999999996 7899999
Q ss_pred hHHHHHHhcCCCCChhhhcCCC
Q 011322 448 QLLPTLARSQPFVDKAKLQQAS 469 (488)
Q Consensus 448 ~~~~~l~~~~~~~~~~~~~~~~ 469 (488)
..+++|++++..+++..+.++.
T Consensus 374 ~~~~~~i~~~~~~~~~~l~~~~ 395 (410)
T 3ef6_A 374 ALATRLVEARAAIEPARLADLS 395 (410)
T ss_dssp HHHHHHHHHTCBCCHHHHHCTT
T ss_pred HHHHHHHhCCCCCCHHHhcCCC
Confidence 9999999999999988886663
No 4
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=6.7e-54 Score=433.96 Aligned_cols=403 Identities=28% Similarity=0.471 Sum_probs=339.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
++++|||||||+||+++|..|++.|+ +.+|+|||+++..+|.++++++.++... .....+ .....++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~-~~~~~~-----------~~~~~~~ 69 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYLAGK-ATAESL-----------YLRTPDA 69 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSCCSCCBCSGGGGTTTTTTC-SCSGGG-----------BSSCHHH
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCc-CCCEEEEECCCCCCCcCCCCcHHHhCCC-CChHHh-----------cccCHHH
Confidence 35899999999999999999999987 5689999999999999888876554321 111111 1245678
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCc---EEEecCHHHHHHHHHhhhc
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG---VHYIRDVADADALISSLEK 206 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~---v~~~~~~~~~~~~~~~~~~ 206 (488)
+++.+++++.+++|+.++++.++|++.+|+++.||+||+|||+.|. .|+++|.+.++ ++++++..+...+.+.+..
T Consensus 70 ~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~-~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~ 148 (431)
T 1q1r_A 70 YAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPR-PLPVASGAVGKANNFRYLRTLEDAECIRRQLIA 148 (431)
T ss_dssp HHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-CCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCT
T ss_pred HHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCcc-CCCCCCcccCCCceEEEECCHHHHHHHHHHhhc
Confidence 8899999999999999999989999999989999999999999886 45566755556 8888998888888877777
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeC-CCCcEEE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG-SDGRVAA 285 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~-~~~~v~~ 285 (488)
+++++|||+|++|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++.||++++++.+++++.. +++.+..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~ 228 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTA 228 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEE
Confidence 899999999999999999999999999999999999987789999999999999999999999999999852 3456667
Q ss_pred EEeCCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHH
Q 011322 286 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQ 365 (488)
Q Consensus 286 v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~ 365 (488)
+.+++|+++++|.||+|+|.+|+.++++++|+..+ ++|.||++++|+.|+|||+|||+..+....|...+.++|..|..
T Consensus 229 v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~gi~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~ 307 (431)
T 1q1r_A 229 VLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NGIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALE 307 (431)
T ss_dssp EEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHH
T ss_pred EEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC-CCEEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHH
Confidence 88999999999999999999999999999999887 46999999999999999999999987666666666778999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCceeEeccccCCCCcceeeeEeeCCCC--cEEEEccCC-CcEEEEEEECCEEEEEEeecC
Q 011322 366 SAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESG 442 (488)
Q Consensus 366 ~g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~ 442 (488)
||+.+|.+|++.. .+|..+|++|+++|+.. ++++|.... +....++.+ ..+.++|.++|+|+|+++ .+
T Consensus 308 qg~~aa~~i~g~~-~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~g 378 (431)
T 1q1r_A 308 QARKIAAILCGKV-PRDEAAPWFWSDQYEIG-------LKMVGLSEGYDRIIVRGSLAQPDFSVFYLQGDRVLAVDT-VN 378 (431)
T ss_dssp HHHHHHHHHTTCC-CCCCCCCEEEEEETTEE-------EEEEECCTTCSEEEEEEETTTTEEEEEEEETTEEEEEEE-ES
T ss_pred HHHHHHHHhcCCC-CCCCCCCeEEEEECCce-------EEEEeCCCCCCEEEEEccCCCCeEEEEEEeCCEEEEEEE-EC
Confidence 9999999999744 57888999999988754 677776543 345556554 457888889999999996 78
Q ss_pred ChHHhhHHHHHHhcCCCCChhhhcCC-CcHHHHHH
Q 011322 443 SPEEFQLLPTLARSQPFVDKAKLQQA-SSVEEALE 476 (488)
Q Consensus 443 ~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~ 476 (488)
+......++.++..+..++...+.++ ..+.+.++
T Consensus 379 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~ 413 (431)
T 1q1r_A 379 RPVEFNQSKQIITDRLPVEPNLLGDESVPLKEIIA 413 (431)
T ss_dssp CHHHHHHHHHHHHTTCCCCHHHHTCTTSCHHHHHH
T ss_pred ChHHHHHHHHHHHCCCCCCHHHhhCCCCCHHHHHH
Confidence 88888889999999999998887665 34555444
No 5
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=2.2e-55 Score=437.20 Aligned_cols=375 Identities=21% Similarity=0.293 Sum_probs=317.3
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
..+++||||||||+||++||.+|++. +.+|+|||++++.+|.+|++++. +... ....++ ..+..
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~---~~~itlie~~~~~~y~~~~l~~~-l~g~-~~~~~l-----------~~~~~ 69 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGK---CDDITMINSEKYLPYYRPRLNEI-IAKN-KSIDDI-----------LIKKN 69 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTT---CSCEEEECSSSSCCBCGGGHHHH-HHSC-CCGGGT-----------BSSCH
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCC---CCEEEEEECCCCCCcccChhhHH-HcCC-CCHHHc-----------cCCCH
Confidence 34578999999999999999999443 45999999999999999998863 3221 111121 24678
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcC
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA 207 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~ 207 (488)
+++++.+++++++++|+++|+++++|++++|+++.||+||||||+.|+ .|+++|.+ +++++++..+...+.+.+..+
T Consensus 70 ~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~-~p~i~G~~--~v~~~~~~~d~~~l~~~l~~~ 146 (385)
T 3klj_A 70 DWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIAN-KIKVPHAD--EIFSLYSYDDALKIKDECKNK 146 (385)
T ss_dssp HHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-CCCCTTCS--CEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcC-CCCCCCCC--CeEEeCCHHHHHHHHHHhhcC
Confidence 899999999999999999999999999999999999999999999887 45567755 889999999998888877788
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 287 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~ 287 (488)
++++|||+|++|+|+|..|++.|.+|+++++.++++++.+++.+.+.+.+.+++.||++++++.++++
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------ 214 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------ 214 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc------------
Confidence 99999999999999999999999999999999999998899999999999999999999999877655
Q ss_pred eCCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHH
Q 011322 288 LEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSA 367 (488)
Q Consensus 288 ~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g 367 (488)
|+++++|.||+|+|++|++++++++++..++ +|.||++++|+.|+|||+|||+..+... ..+|..|..||
T Consensus 215 ---g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~~-gi~vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg 284 (385)
T 3klj_A 215 ---GDLIRSSCVITAVGVKPNLDFIKDTEIASKR-GILVNDHMETSIKDIYACGDVAEFYGKN------PGLINIANKQG 284 (385)
T ss_dssp ---HHHHHHSEEEECCCEEECCGGGTTSCCCBSS-SEEECTTCBCSSTTEEECGGGEEETTBC------CCCHHHHHHHH
T ss_pred ---CeEEecCeEEECcCcccChhhhhhcCCCcCC-CEEECCCcccCCCCEEEEEeeEecCCCc------ccHHHHHHHHH
Confidence 5679999999999999999999999999874 5999999999999999999999876532 23688899999
Q ss_pred HHHHHHHhcCCCCCCCC-CCceeEeccccCCCCcceeeeEeeCCCC---cEEEEccCCCcEEEEEEECCEEEEEEeecCC
Q 011322 368 QHCIKALLSAQTHTYDY-LPYFYSRVFEYEGSPRKVWWQFFGDNVG---ETIEIGNFDPKIATFWIDSGKLKGVLVESGS 443 (488)
Q Consensus 368 ~~~a~~i~~~~~~~~~~-~p~~~~~~~~~~g~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 443 (488)
+.+|++|++.. .+|.. +|++|+++|+.. ++++|.... +.+.....+..|.++|+++|+|+|+++ .|+
T Consensus 285 ~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~g~ 355 (385)
T 3klj_A 285 EVAGLNACGED-ASYSEIIPSPILKVSGIS-------IISCGDIENNKPSKVFRSTQEDKYIVCMLKENKIDAAAV-IGD 355 (385)
T ss_dssp HHHHHHHTTCC-CCCCCCCCCCEEEETTEE-------EEEESCCTTCCCSEEEEEECSSCEEEEEEETTEEEEEEE-ESC
T ss_pred HHHHHHhcCCC-cCCCCCCCcEEEEeCCCc-------EEEEcCCCCCCCeEEEEECCCCeEEEEEEECCEEEEEEE-ECC
Confidence 99999999744 46665 699999999864 778887643 234342224679999999999999996 788
Q ss_pred hHHhhHHHHHHhcCCCCChhhhcCCCcHHHHHHH
Q 011322 444 PEEFQLLPTLARSQPFVDKAKLQQASSVEEALEI 477 (488)
Q Consensus 444 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 477 (488)
......++.+++++.+++.. ++++|.+..
T Consensus 356 ~~~~~~~~~~i~~~~~~~~~-----~~~~E~~~~ 384 (385)
T 3klj_A 356 VSLGTKLKKAIDSSKSFDNI-----SSLDAILNN 384 (385)
T ss_dssp HHHHHHHHHHHHTTCBCSCC-----SCHHHHHTT
T ss_pred cHHHHHHHHHHHcCCCcccc-----cCHHHHHhh
Confidence 88888999999999877644 899998863
No 6
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=5.8e-54 Score=431.58 Aligned_cols=392 Identities=26% Similarity=0.400 Sum_probs=328.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
++++|+|||||+||+++|..|++.|+ +.+|+|||+++..+|.++++++.++.... ..++ ... +
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~-------------~~~-~ 68 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGD--AEKI-------------RLD-C 68 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTC-CSCEEEEESSCSCCBCSGGGGTHHHHHCC--GGGS-------------BCC-C
T ss_pred CCCcEEEECChHHHHHHHHHHHccCC-CCeEEEEECCCCCcccCCCCCHHHhCCCc--hhhh-------------hHH-H
Confidence 46799999999999999999999987 56799999999999998887764442211 1111 011 4
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCC-cCCCCCcEEEecCHHHHHHHHHhhhcCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEK-IGGYLPGVHYIRDVADADALISSLEKAK 208 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 208 (488)
+++.+++++.+++|+.++++.++|++.+|+++.||+||+|||+.+. .|++ +|.+ ++++++++..+...+.+.+..++
T Consensus 69 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~-~~~i~~G~~-~~v~~~~~~~~~~~l~~~~~~~~ 146 (408)
T 2gqw_A 69 KRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPR-ALPTLQGAT-MPVHTLRTLEDARRIQAGLRPQS 146 (408)
T ss_dssp TTSCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-CCGGGTTCS-SCEEECCSHHHHHHHHTTCCTTC
T ss_pred HHHCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCC-CCCccCCCC-CcEEEECCHHHHHHHHHHhhcCC
Confidence 5677999999988999999999999999989999999999999886 4556 6765 78888999888888877666789
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 288 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~ 288 (488)
+++|||+|.+|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++.||++++++++++++ + + .|.+
T Consensus 147 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~ 220 (408)
T 2gqw_A 147 RLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLL 220 (408)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEE
Confidence 99999999999999999999999999999999999877899999999999999999999999999998 3 2 5778
Q ss_pred CCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHH
Q 011322 289 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 368 (488)
Q Consensus 289 ~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~ 368 (488)
++|+++++|.||+|+|.+|++++++++|+..++ +|.||+++||+.|+|||+|||+..+....|...+.++|..|..||+
T Consensus 221 ~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~-gi~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~ 299 (408)
T 2gqw_A 221 DDGTRIAADMVVVGIGVLANDALARAAGLACDD-GIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGI 299 (408)
T ss_dssp TTSCEEECSEEEECSCEEECCHHHHHHTCCBSS-SEECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHH
T ss_pred CCCCEEEcCEEEECcCCCccHHHHHhCCCCCCC-CEEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHH
Confidence 899999999999999999999999999998874 5999999999999999999999987655565555678999999999
Q ss_pred HHHHHHhcCCCCCCCCCCceeEeccccCCCCcceeeeEeeC-CCCcEEEEccCC---CcEEEEEEECCEEEEEEeecCCh
Q 011322 369 HCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGD-NVGETIEIGNFD---PKIATFWIDSGKLKGVLVESGSP 444 (488)
Q Consensus 369 ~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~-~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~ 444 (488)
.+|.||++....+|..+|++|+++|+.. +.++|. ...+....++.+ ..|.++|.++|+|+|+++ .+..
T Consensus 300 ~aa~~i~g~~~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~g~~ 371 (408)
T 2gqw_A 300 AVARHLVDPTAPGYAELPWYWSDQGALR-------IQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATC-VNNA 371 (408)
T ss_dssp HHHHHHHCTTSCCCCCCCEEEEEETTEE-------EEEEECSCCSEEEEESCCCSSSCCEEEEEEETTEEEEEEE-ESCH
T ss_pred HHHHHhcCCCCCcCCCCCeEEEEECCce-------EEEECCCCCCEEEEEccCCCCCCeEEEEEEeCCEEEEEEE-ECCh
Confidence 9999999754327888999999998764 677776 222445555543 568899999999999997 6777
Q ss_pred HHhhHHHHHHhcCCCCChhhhcCCC-cHHHHH
Q 011322 445 EEFQLLPTLARSQPFVDKAKLQQAS-SVEEAL 475 (488)
Q Consensus 445 ~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ 475 (488)
.....++.+|+++.+++...+.++. .+.+.+
T Consensus 372 ~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~ 403 (408)
T 2gqw_A 372 RDFAPLRRLLAVGAKPDRAALADPATDLRKLA 403 (408)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHCTTCCHHHHH
T ss_pred HHHHHHHHHHHCCCCCChHHhcCCCCCHHHHh
Confidence 7888899999999999988776654 444444
No 7
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=2.3e-51 Score=422.05 Aligned_cols=406 Identities=23% Similarity=0.360 Sum_probs=309.2
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCC--CCCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSG--GERQ 125 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 125 (488)
++.+++|||||||+||++||..|++.+. +.+|+|||++++++|.+|++++.++............+....+.. ....
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~-g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDP-GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQ 86 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHST-TCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSS
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCC-CCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhccccccccccccccccc
Confidence 4456899999999999999999999864 569999999999999999888766543221000000000000000 0000
Q ss_pred CHhH---------HHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCC----CCcEEEec
Q 011322 126 TPEW---------YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYIR 192 (488)
Q Consensus 126 ~~~~---------~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~----~~~v~~~~ 192 (488)
..++ +.+.+++++++++|+.+|++.++|++.+|+++.||+||||||+.|..+| .++.. .+++++++
T Consensus 87 ~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~-~~~~~~~~~~~~v~~~~ 165 (493)
T 1m6i_A 87 PPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLS-AIDRAGAEVKSRTTLFR 165 (493)
T ss_dssp CGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCH-HHHTSCHHHHHTEEECC
T ss_pred chHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCC-CcccccccccCceEEEc
Confidence 1111 1356899999999999999999999999999999999999999886433 33321 35788899
Q ss_pred CHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHh----CCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEc
Q 011322 193 DVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVG----WKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 268 (488)
Q Consensus 193 ~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~----~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~ 268 (488)
+..++..+.+.+..+++++|||+|++|+|+|..|.+ .|.+|+++++.+.++.+.+++.+.+.+.+.+++.||++++
T Consensus 166 ~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~ 245 (493)
T 1m6i_A 166 KIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMP 245 (493)
T ss_dssp SHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEEC
T ss_pred CHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEe
Confidence 999888888777789999999999999999999977 4788999999988888888999999999999999999999
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc--CCCEEeCCCCCCCCCCEEEEceeccc
Q 011322 269 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS--VGGIQVDGQFRTRMPGIFAIGDVAAF 346 (488)
Q Consensus 269 ~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~--~g~i~vd~~~~t~~~~Iya~GD~a~~ 346 (488)
++.|++++.+ ++.+ .+.+.+|++++||.||+|+|.+|++++++.+|+..+ +|+|.||+++|| .|+|||+|||+..
T Consensus 246 ~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~~ 322 (493)
T 1m6i_A 246 NAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAACF 322 (493)
T ss_dssp SCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGEEE
T ss_pred CCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeEec
Confidence 9999999753 3333 688899999999999999999999999999999876 489999999998 6999999999997
Q ss_pred CCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeEeccccCCCCc----ceeeeEeeCCCC-----c----
Q 011322 347 PLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPR----KVWWQFFGDNVG-----E---- 413 (488)
Q Consensus 347 ~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~----~~~~~~~g~~~~-----~---- 413 (488)
+....|.. ++++|+.|..||+.+|+||++ ...+|...|+||++++...+... ...++++|.... .
T Consensus 323 ~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g-~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~~~~~~~ 400 (493)
T 1m6i_A 323 YDIKLGRR-RVEHHDHAVVSGRLAGENMTG-AAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSA 400 (493)
T ss_dssp EETTTEEE-CCCCHHHHHHHHHHHHHHHTS-CCCCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCTTCSHHHH
T ss_pred cCcccCcc-ccchHHHHHHHHHHHHHHhcC-CCCCcCCcCceeeeeccCcceEEEeccCCCcceEEeecccccccccccc
Confidence 76554543 467899999999999999996 45689999999999873211000 001223332100 0
Q ss_pred --------------------EEEE----c-------c-CCCcEEEEEEECCEEEEEEeecCChHHhhHHHHHHhcCCCCC
Q 011322 414 --------------------TIEI----G-------N-FDPKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPFVD 461 (488)
Q Consensus 414 --------------------~~~~----~-------~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~ 461 (488)
.... | + ...++.+||+++|+|+|+++ .|++..+..+++||+.+..++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~li~~~~~~~ 479 (493)
T 1m6i_A 401 TEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVL-WNIFNRMPIARKIIKDGEQHE 479 (493)
T ss_dssp HHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEEEEEE-ESCCSCHHHHHHHHHHCCBCS
T ss_pred cccccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEEEEEE-ecCcchHHHHHHHHhCCCCCC
Confidence 0000 1 1 12567889999999999986 788999999999998887665
No 8
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=9.8e-50 Score=403.73 Aligned_cols=393 Identities=20% Similarity=0.278 Sum_probs=303.4
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (488)
+||||||||+||++||.+|++.|. +.+|+|||++++.+|.++.++. ++.......... ......++++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~~~----------~~~~~~~~~~ 68 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDK-ESDIIIFEKDRDMSFANCALPY-VIGEVVEDRRYA----------LAYTPEKFYD 68 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCS-SSCEEEEESSSCSSBCGGGHHH-HHTTSSCCGGGT----------BCCCHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-CCcEEEEeCCCCCCCCcchhHH-HHcCCccchhhh----------hhcCHHHHHH
Confidence 479999999999999999999986 6789999999999998877654 221111111000 0123457788
Q ss_pred HCCcEEEeCCcEEEEeCCCcEEEeCCC-----cEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhh-
Q 011322 132 EKGIEMIYQDPVTSIDIEKQTLITNSG-----KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE- 205 (488)
Q Consensus 132 ~~~v~~~~~~~v~~id~~~~~v~~~~g-----~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~- 205 (488)
+.+++++.+++|+.+|.+.+.+.+.++ .++.||+||||||++|.. |.++ .+++++++++.++..+.+.+.
T Consensus 69 ~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~-p~i~---g~~~~~~~~~~~~~~l~~~~~~ 144 (437)
T 4eqs_A 69 RKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS-LGFE---SDITFTLRNLEDTDAIDQFIKA 144 (437)
T ss_dssp HHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECC-CCCC---CTTEECCSSHHHHHHHHHHHHH
T ss_pred hcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccc-cccc---CceEEeeccHHHHHHHHHhhhc
Confidence 899999999999999999988776432 368999999999998763 4333 356788888888887766543
Q ss_pred -cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEE
Q 011322 206 -KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (488)
Q Consensus 206 -~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~ 284 (488)
.+++++|||+|.+|+|+|..+.++|.+||++++.+++++. +++++.+.+.+.++++||++++++++++++..
T Consensus 145 ~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~------ 217 (437)
T 4eqs_A 145 NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYRLNEEINAINGN------ 217 (437)
T ss_dssp HTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGGGHHHHHHHHHTTCCEEESCCEEEEETT------
T ss_pred cCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchhHHHHHHHhhccceEEEeccEEEEecCC------
Confidence 5789999999999999999999999999999999999974 79999999999999999999999999998732
Q ss_pred EEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHH
Q 011322 285 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 363 (488)
Q Consensus 285 ~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A 363 (488)
.+.+++|+++++|.|++|+|++||+++++..|+..+ +|+|.||+++||++|||||+|||+..+....+.......+..|
T Consensus 218 ~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A 297 (437)
T 4eqs_A 218 EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGA 297 (437)
T ss_dssp EEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHH
T ss_pred eeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHH
Confidence 578899999999999999999999999999999876 6779999999999999999999999988777777777788899
Q ss_pred HHHHHHHHHHHhcCCCCCCC-CCCceeEeccccCCCCcceeeeEeeCCCCc-------EEE--Ecc---C----CCcEEE
Q 011322 364 RQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE--IGN---F----DPKIAT 426 (488)
Q Consensus 364 ~~~g~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~~--~~~---~----~~~~~~ 426 (488)
.+||+.+|+||++.....+. ..+..+...++.+ +..+|....+ ... ... . ...+.|
T Consensus 298 ~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~-------ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~K 370 (437)
T 4eqs_A 298 HRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYT-------FASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLR 370 (437)
T ss_dssp HHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEE-------EEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEE
T ss_pred HHHHHHHHHHHcCCCCcccccceeEEeeeeccce-------EEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEE
Confidence 99999999999986544332 3333333333322 4445544321 111 110 0 123667
Q ss_pred EEEE--CCEEEEEEeecCC-hHHhhHHHH-HHhcCCCCCh-hhh--cCCCcHHHH
Q 011322 427 FWID--SGKLKGVLVESGS-PEEFQLLPT-LARSQPFVDK-AKL--QQASSVEEA 474 (488)
Q Consensus 427 ~~~~--~~~~~g~~~~~~~-~~~~~~~~~-l~~~~~~~~~-~~~--~~~~~~~~~ 474 (488)
+.++ +++|+|+++++.+ ++++..... +|+++.+++. ..+ ..||+++++
T Consensus 371 li~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~ 425 (437)
T 4eqs_A 371 VYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSHP 425 (437)
T ss_dssp EEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCS
T ss_pred EEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCch
Confidence 7664 4899999987764 777665544 5788888763 332 446887765
No 9
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=7.8e-49 Score=403.57 Aligned_cols=407 Identities=18% Similarity=0.265 Sum_probs=311.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
+++||+|||||+||+++|..|++.|.++.+|+|||+++..+|....+.. ++......+..+ .....++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~ 101 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMAL-WIGEQIAGPEGL-----------FYSDKEE 101 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHH-HHTTSSSCSGGG-----------BSCCHHH
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccch-hhcCccCCHHHh-----------hhcCHHH
Confidence 3589999999999999999999987113489999999876664322210 111100111111 1234677
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeC-CC--cEEEeccEEecCCCCCCcCCCCcCCC-----------CCcEEEecCHH
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQTLITN-SG--KLLKYGSLIVATGCTASRFPEKIGGY-----------LPGVHYIRDVA 195 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~~v~~~-~g--~~i~yd~lVlAtG~~~~~~~~~~g~~-----------~~~v~~~~~~~ 195 (488)
+++.+++++.+++|+.++++.+++++. ++ .++.||+||||||+.|. .|+++|.+ .+++++++++.
T Consensus 102 ~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~ 180 (490)
T 2bc0_A 102 LESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPI-LPPIKGAEIKEGSLEFEATLENLQFVKLYQ 180 (490)
T ss_dssp HHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEEC-CCSCBTCCBCTTCTTCCBSSTTEEECSSHH
T ss_pred HHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcC-CCCCCCccccccccccccccCCEEEeCCHH
Confidence 888999999999999999988888886 54 46999999999999886 46677766 57899999999
Q ss_pred HHHHHHHhh--hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEE
Q 011322 196 DADALISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIK 273 (488)
Q Consensus 196 ~~~~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~ 273 (488)
+++.+.+.. ..+++++|||+|.+|+|+|..|++.|.+|+++++.++++++.+++++.+.+.+.+++.||+++++++++
T Consensus 181 ~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 260 (490)
T 2bc0_A 181 NSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVK 260 (490)
T ss_dssp HHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEE
T ss_pred HHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEE
Confidence 998888877 678999999999999999999999999999999999999877899999999999999999999999999
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCC
Q 011322 274 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYD 352 (488)
Q Consensus 274 ~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~ 352 (488)
+++. ++.+..+.+ +|+++++|.||+|+|++|++++++.. +..+ +|+|.||+++||+.|+|||+|||+..+....+
T Consensus 261 ~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g 336 (490)
T 2bc0_A 261 EVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATR 336 (490)
T ss_dssp EEEC--SSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTT
T ss_pred EEEc--CCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEECCCcccCCCCEEEeeeeEEeccccCC
Confidence 9984 344434555 67889999999999999999988777 7664 67799999999999999999999997655555
Q ss_pred cccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeEeccccCCCCcceeeeEeeCCCC-------cEEE-------Ec
Q 011322 353 RTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE-------IG 418 (488)
Q Consensus 353 ~~~~~~~~~~A~~~g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~-------~~~~-------~~ 418 (488)
......++..|..||+.+|.||++.........|++|+.+|+.. +..+|.... +... ..
T Consensus 337 ~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~ 409 (490)
T 2bc0_A 337 DTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGLH-------MVSTGLTLEKAKRLGFDAAVTEYTDNQKP 409 (490)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSC
T ss_pred ceeecccHHHHHHHHHHHHHHhcCCCCCCCCcccceEEEECCcE-------eEEeeCCHHHHHHcCCceEEEEEecCCcc
Confidence 54445678899999999999999743222334677888888643 556665431 1111 11
Q ss_pred cC-----CCcEEEEEEE--CCEEEEEEeecC-ChHHhh-HHHHHHhcCCCCCh-hh--hcCCCcHHHHHHHHHc
Q 011322 419 NF-----DPKIATFWID--SGKLKGVLVESG-SPEEFQ-LLPTLARSQPFVDK-AK--LQQASSVEEALEIARA 480 (488)
Q Consensus 419 ~~-----~~~~~~~~~~--~~~~~g~~~~~~-~~~~~~-~~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~~~~ 480 (488)
.+ ...+.+++++ +++|+|+++++. ++.++. .+..+|+.+.+++. .. +..||+++|++..+..
T Consensus 410 ~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~ 483 (490)
T 2bc0_A 410 EFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKPYNYITM 483 (490)
T ss_dssp TTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHHHHSCCCCCTTTCCTTCHHHH
T ss_pred cccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCchhHHHHH
Confidence 11 1236676664 599999998776 565554 55667888888863 32 5788999987665543
No 10
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.1e-48 Score=385.29 Aligned_cols=354 Identities=23% Similarity=0.388 Sum_probs=280.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
..||+|||||+||++||..|++.| +|+|||+++..+|.++.+++ ++.. ......+ .....+++
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g----~V~lie~~~~~~~~~~~l~~-~~~g-~~~~~~~-----------~~~~~~~~ 70 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY----EVTVIDKEPVPYYSKPMLSH-YIAG-FIPRNRL-----------FPYSLDWY 70 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS----EEEEECSSSSCCCCSTTHHH-HHTT-SSCGGGG-----------CSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC----CEEEEECCCCCccccchhHH-HHhC-CCCHHHh-----------ccCCHHHH
Confidence 469999999999999999998875 89999999988888777654 2221 1111111 23457788
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeE
Q 011322 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 210 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v 210 (488)
++.+++++.+++|+.+|++.++|+ .+++++.||+||||||+.|. .|+++| .++++++++..+...+.+.+..++++
T Consensus 71 ~~~~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~-~p~i~G--~~~v~~~~~~~~~~~l~~~~~~~~~v 146 (367)
T 1xhc_A 71 RKRGIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAR-EPQIKG--KEYLLTLRTIFDADRIKESIENSGEA 146 (367)
T ss_dssp HHHTEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEEC-CCCSBT--GGGEECCCSHHHHHHHHHHHHHHSEE
T ss_pred HhCCcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCC-CCCCCC--cCCEEEEcCHHHHHHHHHHhhcCCcE
Confidence 899999999888999999988888 77888999999999999887 455666 56788888888888877766667999
Q ss_pred EEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC
Q 011322 211 VVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 290 (488)
Q Consensus 211 vVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~ 290 (488)
+|||+|++|+|+|..|+++|.+|+++++.+++++ +++++.+.+.+.+++.||++++++++++++. . .+.+++
T Consensus 147 vViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~---~---~v~~~~ 218 (367)
T 1xhc_A 147 IIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEETGVKFFLNSELLEANE---E---GVLTNS 218 (367)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHHTTEEEECSCCEEEECS---S---EEEETT
T ss_pred EEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe---e---EEEECC
Confidence 9999999999999999999999999999999987 8999999999999999999999999999972 1 477888
Q ss_pred CcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHH
Q 011322 291 GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHC 370 (488)
Q Consensus 291 g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~ 370 (488)
|+ +++|.|++|+|++|++++++++++..+ ++|.||+++||+.|||||+|||+..+... ...+..|..||+.+
T Consensus 219 g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg~~a 290 (367)
T 1xhc_A 219 GF-IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFRTSAKDVYAIGDCAEYSGII------AGTAKAAMEQARVL 290 (367)
T ss_dssp EE-EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEBTTBC------CCSHHHHHHHHHHH
T ss_pred CE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeEeeeecCCCC------ccHHHHHHHHHHHH
Confidence 88 999999999999999999999999887 56999999999999999999999764321 22677899999999
Q ss_pred HHHHhcCCCCCCCCCCcee-EeccccCCCCcceeeeEeeCCCCcEEEEccCCCcEEEEEEECCEEEEEEeecCChHHhhH
Q 011322 371 IKALLSAQTHTYDYLPYFY-SRVFEYEGSPRKVWWQFFGDNVGETIEIGNFDPKIATFWIDSGKLKGVLVESGSPEEFQL 449 (488)
Q Consensus 371 a~~i~~~~~~~~~~~p~~~-~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 449 (488)
|+||++. ..+|...+.+| ..+++.. +..+|....+.... ..|.++++++++|+|+++ .+.......
T Consensus 291 a~~i~g~-~~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~~~~~----~~~~k~~~~~~~ilG~~~-~g~~~~~~~ 357 (367)
T 1xhc_A 291 ADILKGE-PRRYNFKFRSTVFKFGKLQ-------IAIIGNTKGEGKWI----EDNTKVFYENGKIIGAVV-FNDIRKATK 357 (367)
T ss_dssp HHHHTTC-CCCCCSSCCEEEEEETTEE-------EEEEECCSSCEEEE----ETTEEEEC-----CEEEE-ESCHHHHHH
T ss_pred HHHhcCC-CccCCCCCCceEEEECCce-------EEEECCCCCCCccc----ceEEEEEEECCEEEEEEE-ECChHHHHH
Confidence 9999974 35566654444 3444432 66778765432211 346788888899999997 677777888
Q ss_pred HHHHH
Q 011322 450 LPTLA 454 (488)
Q Consensus 450 ~~~l~ 454 (488)
+++++
T Consensus 358 ~~~~i 362 (367)
T 1xhc_A 358 LEKEI 362 (367)
T ss_dssp HC---
T ss_pred HHHHH
Confidence 88776
No 11
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=3.2e-48 Score=397.64 Aligned_cols=411 Identities=22% Similarity=0.315 Sum_probs=288.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
+++|+|||||+||++||..|++.+. +.+|+|||+++.++|.++.++. ++.........+..... . .....+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~-g~~Vtvie~~~~~~~~~~gl~~-~~~g~~~~~~~~~~~~~----~-~~~~~~~~ 75 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDP-EAHVTMIDQASRISYGGCGIPY-YVSGEVSNIESLQATPY----N-VVRDPEFF 75 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCT-TSEEEEECCC--------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCcccccccccch-hhcCCCCchHHhccccc----h-hccCHHHH
Confidence 5799999999999999999999843 4599999999998888765543 22111111111100000 0 01223334
Q ss_pred H-HCCcEEEeCCcEEEEeCCCcEEEeCC---Cc--EEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhh
Q 011322 131 K-EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (488)
Q Consensus 131 ~-~~~v~~~~~~~v~~id~~~~~v~~~~---g~--~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 204 (488)
. +.+++++.+++|+.++++.+.+.+.+ |+ .+.||+||+|||+.+. .|+++|.+.++++++++..+...+.+.+
T Consensus 76 ~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~l 154 (472)
T 3iwa_A 76 RINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKAN-RPPVEGMDLAGVTPVTNLDEAEFVQHAI 154 (472)
T ss_dssp -----CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCSCTTTTSBTEEECCSHHHHHHHHHHC
T ss_pred hhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcC-CCCCCCCCCCCEEEeCCHHHHHHHHHHh
Confidence 4 57999999999999999998888764 65 7999999999999876 4667787778888898888887777655
Q ss_pred h--cCCeEEEECCcHHHHHHHHHHHhC-CCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCC
Q 011322 205 E--KAKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG 281 (488)
Q Consensus 205 ~--~~~~vvVvG~G~~g~e~A~~l~~~-g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~ 281 (488)
. .+++++|||+|.+|+|+|..|.+. |.+|+++++.++++++.+++++.+.+.+.+++.||+++++++|++++.. ++
T Consensus 155 ~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~ 233 (472)
T 3iwa_A 155 SAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NG 233 (472)
T ss_dssp CTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SS
T ss_pred hcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CC
Confidence 3 478999999999999999999999 9999999999999986789999999999999999999999999999863 45
Q ss_pred cEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccH
Q 011322 282 RVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 360 (488)
Q Consensus 282 ~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~ 360 (488)
.+ .+.+++|+++++|.||+|+|++|+.++++++|+..+ +|+|.||+++||+.|||||+|||+..+....|......++
T Consensus 234 ~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~ 312 (472)
T 3iwa_A 234 KV-ARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLG 312 (472)
T ss_dssp BE-EEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCT
T ss_pred eE-EEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceecccccCCceeecchH
Confidence 54 377889999999999999999999999988999875 6889999999999999999999998777665655445577
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceeEeccccCCCCcceeeeEeeCCCCc-------E--EEEc---------cCCC
Q 011322 361 DHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T--IEIG---------NFDP 422 (488)
Q Consensus 361 ~~A~~~g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~--~~~~---------~~~~ 422 (488)
..|..||+.+|+||++........+|++|+.+|+.. +..+|....+ . .... +...
T Consensus 313 ~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~-------~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 385 (472)
T 3iwa_A 313 SMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGS-------ASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTI 385 (472)
T ss_dssp THHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCE-------EEEEECCHHHHHHTTCCEEEEEEEC-----------C
T ss_pred HHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCce-------eEEEECCHHHHHHcCCceEEEEEecCCccCccCCCce
Confidence 789999999999999754432335677777777643 5556654321 1 1100 1123
Q ss_pred cEEEEEEE--CCEEEEEEeecC---ChHHhh-HHHHHHhcCCCCC-hhh-hcCC-CcHHHHHHHH
Q 011322 423 KIATFWID--SGKLKGVLVESG---SPEEFQ-LLPTLARSQPFVD-KAK-LQQA-SSVEEALEIA 478 (488)
Q Consensus 423 ~~~~~~~~--~~~~~g~~~~~~---~~~~~~-~~~~l~~~~~~~~-~~~-~~~~-~~~~~~~~~~ 478 (488)
.+.|+.++ +++|+|+++++. .+.++. .+..+|+++.+++ ... .+.+ |+++|++...
T Consensus 386 ~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~~~ 450 (472)
T 3iwa_A 386 MTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVVYSPPFASAMDIV 450 (472)
T ss_dssp EEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC--------CCHH
T ss_pred EEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhcccccCCCCCCCcccHH
Confidence 46777774 599999998666 224544 4455678888876 233 2444 8998876544
No 12
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=5.1e-48 Score=393.86 Aligned_cols=397 Identities=19% Similarity=0.222 Sum_probs=300.6
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (488)
+||||||||+||++||.+|++.+. +.+|+|||+++..+|.+..+.. ++.........+ .....+++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~g~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~ 69 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYP-QAEISLIDKQATVGYLSGGLSA-YFNHTINELHEA-----------RYITEEELR 69 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCCSSCCC----------------------------CCCCHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCcccCccchh-hhcCCCCCHHHh-----------hcCCHHHHH
Confidence 699999999999999999999843 4499999999988877554432 221111111111 134678889
Q ss_pred HCCcEEEeCCcEEEEeCCCcEEEeC---CCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCC
Q 011322 132 EKGIEMIYQDPVTSIDIEKQTLITN---SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208 (488)
Q Consensus 132 ~~~v~~~~~~~v~~id~~~~~v~~~---~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 208 (488)
+.+++++.+++|+.++++.+.+.+. ++.++.||+||||||+.|. .|+++|.+.+++++.++..+...+.+....++
T Consensus 70 ~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 148 (452)
T 3oc4_A 70 RQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQF-STQIRGSQTEKLLKYKFLSGALAAVPLLENSQ 148 (452)
T ss_dssp HTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBC-CCCCBTTTCTTEEEGGGCC----CCHHHHTCS
T ss_pred HCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCC
Confidence 9999999999999999999888763 5567999999999999887 46678877788888887777777666667889
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 288 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~ 288 (488)
+++|||+|.+|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++.||++++++.|++++.. ++.+ .+.+
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~ 226 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLET 226 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEE
Confidence 9999999999999999999999999999999999987789999999999999999999999999999854 4455 6777
Q ss_pred CCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHH
Q 011322 289 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSA 367 (488)
Q Consensus 289 ~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g 367 (488)
++| ++++|.||+|+|++|++++++.. +..+ +|+|.||+++||+.|+|||+|||+..+....+.......+..|..||
T Consensus 227 ~~g-~i~aD~Vv~A~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g 304 (452)
T 3oc4_A 227 SEQ-EISCDSGIFALNLHPQLAYLDKK-IQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTG 304 (452)
T ss_dssp SSC-EEEESEEEECSCCBCCCSSCCTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHH
T ss_pred CCC-EEEeCEEEECcCCCCChHHHHhh-hccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHH
Confidence 777 89999999999999999887654 5554 67899999999999999999999997755545444445788899999
Q ss_pred HHHHHHHhcCCCCCCC-CCCceeEeccccCCCCcceeeeEeeCCCCc-------E--EEE---c----cCCCcEEEEEEE
Q 011322 368 QHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T--IEI---G----NFDPKIATFWID 430 (488)
Q Consensus 368 ~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~--~~~---~----~~~~~~~~~~~~ 430 (488)
+.+|.||++.. ..+. ..+..++.+|+.. +..+|....+ . ... . +....+.|+.++
T Consensus 305 ~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kli~~ 376 (452)
T 3oc4_A 305 LVVANNLEEKT-HRFIGSLRTMGTKVGDYY-------LASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKLIYD 376 (452)
T ss_dssp HHHTTSSSSCC-CCCCCCCCCEEEEETTEE-------EEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEEEEE
T ss_pred HHHHHHhcCCC-ccCCCccccEEEEEcCee-------EEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEEEEE
Confidence 99999999753 3333 2345566777642 5556654321 1 111 0 112347788776
Q ss_pred C--CEEEEEEeecC-ChHHhhH-HHHHHhcCCCCC-hhh--hcCCCcHHHH
Q 011322 431 S--GKLKGVLVESG-SPEEFQL-LPTLARSQPFVD-KAK--LQQASSVEEA 474 (488)
Q Consensus 431 ~--~~~~g~~~~~~-~~~~~~~-~~~l~~~~~~~~-~~~--~~~~~~~~~~ 474 (488)
. ++|+|+++++. ++.++.. +..+|+++.+++ ... +..||+++|+
T Consensus 377 ~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~ 427 (452)
T 3oc4_A 377 KVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTNI 427 (452)
T ss_dssp TTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSCS
T ss_pred CCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCCc
Confidence 4 89999998776 5666554 455678888876 322 4678888773
No 13
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.5e-48 Score=397.84 Aligned_cols=403 Identities=20% Similarity=0.264 Sum_probs=310.4
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCC--CCCCCCCcccccCCCCCCCCHhH
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDK--KPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
+||+|||||+||+++|..|++.+. ..+|+|||+++..+|....+.. ++..... .+..+ .....++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----------~~~~~~~ 67 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHP-DADVTAYEMNDNISFLSCGIAL-YLGKEIKNNDPRGL-----------FYSSPEE 67 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT-TCEEEEEESSSCCCBCGGGHHH-HHTTCBGGGCGGGG-----------BSCCHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCCcccccchh-hhcCCcccCCHHHh-----------hhcCHHH
Confidence 489999999999999999999832 3489999999877665332211 1111000 01111 2345677
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCC-----CcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhh
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQTLITNS-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~~v~~~~-----g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 204 (488)
+++.+++++.+++|+.++.+.+++.+.+ ++++.||+||+|||+.|. .|+++|.+.+++++++++.+...+.+..
T Consensus 68 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~ 146 (452)
T 2cdu_A 68 LSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPT-VPPIPGIDSSRVYLCKNYNDAKKLFEEA 146 (452)
T ss_dssp HHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTTTSTTEEECSSHHHHHHHHHHG
T ss_pred HHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcC-CCCCCCCCCCCEEEeCcHHHHHHHHHHh
Confidence 8889999988888999998888887754 467999999999999886 4667776667899999999998888888
Q ss_pred hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEE
Q 011322 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (488)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~ 284 (488)
..+++++|||+|.+|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++.||+++++++|++++.. ++++.
T Consensus 147 ~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~ 225 (452)
T 2cdu_A 147 PKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEII 225 (452)
T ss_dssp GGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEE
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEE
Confidence 88999999999999999999999999999999999999987789999999999999999999999999999853 45554
Q ss_pred EEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHH
Q 011322 285 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 363 (488)
Q Consensus 285 ~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A 363 (488)
.+.+ +|+++++|.||+|+|++|++++++.. +..+ +|+|.||+++||+.|+|||+|||+..+....+......++..|
T Consensus 226 ~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A 303 (452)
T 2cdu_A 226 TKTL-DGKEIKSDIAILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNA 303 (452)
T ss_dssp EEET-TSCEEEESEEEECCCEEECCGGGTTT-SCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHH
T ss_pred EEEe-CCCEEECCEEEECcCCCCCHHHHHHh-hhcCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHH
Confidence 4555 78899999999999999999988877 7764 6779999999999999999999999766555554445688899
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceeEeccccCCCCcceeeeEeeCCCCc-------EE---E--Ecc------CCCcEE
Q 011322 364 RQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TI---E--IGN------FDPKIA 425 (488)
Q Consensus 364 ~~~g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~---~--~~~------~~~~~~ 425 (488)
..||+.+|+||++.........|++|+.+|+.. +..+|....+ .. . .+. ....+.
T Consensus 304 ~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (452)
T 2cdu_A 304 VRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRT-------YVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVLM 376 (452)
T ss_dssp HHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEEE
T ss_pred HHHHHHHHHHhCCCCCcCCCccceEEEEECCee-------eEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEEE
Confidence 999999999999743222334678888888643 5566654311 11 0 111 112366
Q ss_pred EEEEE--CCEEEEEEeecC-ChHHhh-HHHHHHhcCCCCCh-hh--hcCCCcHHHHHHHH
Q 011322 426 TFWID--SGKLKGVLVESG-SPEEFQ-LLPTLARSQPFVDK-AK--LQQASSVEEALEIA 478 (488)
Q Consensus 426 ~~~~~--~~~~~g~~~~~~-~~~~~~-~~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~~ 478 (488)
+++++ +++|+|+++++. ++.++. .+..+|+++.+++. .. ++.||+++|++..+
T Consensus 377 k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~ 436 (452)
T 2cdu_A 377 SLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDRPFNYL 436 (452)
T ss_dssp EEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCSSCHH
T ss_pred EEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCchHHHH
Confidence 77664 589999998776 566654 45667888888763 22 47789998875544
No 14
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.8e-47 Score=389.65 Aligned_cols=399 Identities=21% Similarity=0.256 Sum_probs=302.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
++++|||||||+||+++|..|++.+. +.+|+|||+++...|....++. ++... .....+ .....++
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~-~~~V~vie~~~~~~~~~~~~p~-~~~~~-~~~~~~-----------~~~~~~~ 67 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKP-EWDVKVFEATEWVSHAPCGIPY-VVEGL-STPDKL-----------MYYPPEV 67 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSSCCC-------------------------------------CT
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCc-CCCEEEEECCCccccCCcCCcc-ccCCC-CCHHHh-----------hhcCHHH
Confidence 35799999999999999999999853 4599999999987665433332 11111 111111 1223344
Q ss_pred H-HHCCcEEEeCCcEEEEeCCCcEEEeCCC-cEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhh--
Q 011322 130 Y-KEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE-- 205 (488)
Q Consensus 130 ~-~~~~v~~~~~~~v~~id~~~~~v~~~~g-~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~-- 205 (488)
+ ++.+++++.+++|+.++.+.+.+.+.++ .++.||+||||||+.|. .|+++|.+.+++++.++..+...+.+...
T Consensus 68 ~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~ 146 (449)
T 3kd9_A 68 FIKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQ-VPAIEGVNLKGVFTADLPPDALAIREYMEKY 146 (449)
T ss_dssp HHHHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEEC-CCSCBTTTSTTEECSCSTHHHHHHHHHHSSS
T ss_pred HHHhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhc
Confidence 4 6889999999899999998888888887 47999999999999886 56678877788888888888877777665
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 285 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~ 285 (488)
.+++++|||+|.+|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++. |++++++.+.+++.++ .+..
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~ 223 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE--RVEK 223 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS--SCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC--cEEE
Confidence 789999999999999999999999999999999999998768999999999999999 9999999999998532 3323
Q ss_pred EEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHH
Q 011322 286 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHAR 364 (488)
Q Consensus 286 v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~ 364 (488)
+ +.+++++++|.||+|+|++|++++++.+|+..+ +|+|.||+++||+.|+|||+|||+..+....|.......+..|.
T Consensus 224 v-~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~ 302 (449)
T 3kd9_A 224 V-VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGN 302 (449)
T ss_dssp E-EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHH
T ss_pred E-EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHH
Confidence 3 457788999999999999999999999999876 57799999999999999999999987765556544456788899
Q ss_pred HHHHHHHHHHhcCCCCCCC-CCCceeEeccccCCCCcceeeeEeeCCCCc-------EE--E---Ecc------CCCcEE
Q 011322 365 QSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TI--E---IGN------FDPKIA 425 (488)
Q Consensus 365 ~~g~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~--~---~~~------~~~~~~ 425 (488)
.||+.+|+||++... .+. ..|++|+.+++.. +..+|....+ .. . .+. ....+.
T Consensus 303 ~~g~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~-------~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (449)
T 3kd9_A 303 KMGYVAGSNIAGKEL-HFPGVLGTAVTKFMDVE-------IGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWL 374 (449)
T ss_dssp HHHHHHHHHHTTCCC-CCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEE
T ss_pred HHHHHHHHHhcCCCc-cCCCcccceEEEEcCcE-------EEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEE
Confidence 999999999997543 443 4577787777643 5566654321 11 0 110 112467
Q ss_pred EEEEEC--CEEEEEEeecCChHHhhHH-HHHHhcCCCCC-hhh--hcCCCcHHHHH
Q 011322 426 TFWIDS--GKLKGVLVESGSPEEFQLL-PTLARSQPFVD-KAK--LQQASSVEEAL 475 (488)
Q Consensus 426 ~~~~~~--~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~-~~~--~~~~~~~~~~~ 475 (488)
|+.++. ++|+|+++++..+.++... ..+|+.+.+++ ... +..+|+++++.
T Consensus 375 kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~~ 430 (449)
T 3kd9_A 375 KGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAPVW 430 (449)
T ss_dssp EEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBCSS
T ss_pred EEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCCch
Confidence 777764 8999999988887777655 44578888775 222 35567776544
No 15
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.7e-46 Score=374.82 Aligned_cols=369 Identities=21% Similarity=0.272 Sum_probs=289.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCC-CCHh
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGER-QTPE 128 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 128 (488)
+++||+|||||+||++||..|++.|. +.+|+|+|+++..+|.++.++..+.. ......+ .. ....
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~g~~~~~~~l~~~~~~--~~~~~~~-----------~~~~~~~ 68 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDG-ETPLLMITADDGRSYSKPMLSTGFSK--NKDADGL-----------AMAEPGA 68 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCS-SSCEEEECSSCCCEECGGGGGGTTTT--TCCHHHH-----------EEECHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCC-CCCEEEEECCCCCccCcccccHHHhC--CCCHHHh-----------hccCHHH
Confidence 35899999999999999999999986 56899999998777877766542211 1111111 01 2345
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCC
Q 011322 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 208 (488)
++++.+++++.+++|+.++++.++|.+.+ .++.||+||+|||+.|. .|++++.+.+++++.+++.+...+...+..++
T Consensus 69 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 146 (384)
T 2v3a_A 69 MAEQLNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPI-RVPVEGDAQDALYPINDLEDYARFRQAAAGKR 146 (384)
T ss_dssp HHHHTTCEEECSCCCCEEEGGGTEEEETT-EEEECSEEEECCCEEEC-CCCCBSTTTTCEEECSSHHHHHHHHHHHTTCC
T ss_pred HHHhCCcEEEeCCEEEEEECCCCEEEECC-cEEECCEEEEeCCCCcC-CCCCCCcCcCCEEEECCHHHHHHHHHhhccCC
Confidence 66788999998888999999888898865 46999999999999886 46667766678899999998888877777899
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 288 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~ 288 (488)
+++|||+|++|+|+|..|.+.|.+|+++++.++++++.+++.+.+.+.+.+++.||++++++++++++.++ +. ..+.+
T Consensus 147 ~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~ 224 (384)
T 2v3a_A 147 RVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG-EG-LEAHL 224 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEET-TE-EEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC-CE-EEEEE
Confidence 99999999999999999999999999999999999876799999999999999999999999999998643 32 36788
Q ss_pred CCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHH
Q 011322 289 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 368 (488)
Q Consensus 289 ~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~ 368 (488)
++|+++++|.||+|+|.+|+.++++++|+..++| |.||+++||+.|+|||+|||+..+... ..++..|..||+
T Consensus 225 ~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~------~~~~~~a~~~g~ 297 (384)
T 2v3a_A 225 SDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRTSHANIYALGDCAEVDGLN------LLYVMPLMACAR 297 (384)
T ss_dssp TTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCBCSSTTEEECGGGEEETTBC------CCSHHHHHHHHH
T ss_pred CCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCCCCCCCEEEeeeeeeECCCC------cchHHHHHHHHH
Confidence 8999999999999999999998999999988765 999999999999999999999754321 236778999999
Q ss_pred HHHHHHhcCCCCCCC--CCCceeEeccccCCCCcceeeeEeeCCCC---cEEEEccCCCcEEEEEEE-CCEEEEEEeecC
Q 011322 369 HCIKALLSAQTHTYD--YLPYFYSRVFEYEGSPRKVWWQFFGDNVG---ETIEIGNFDPKIATFWID-SGKLKGVLVESG 442 (488)
Q Consensus 369 ~~a~~i~~~~~~~~~--~~p~~~~~~~~~~g~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 442 (488)
.+|+||++.. .++. .+|+++ |.. + ..++..|.... .....++ ...+.+++++ +|+|+|+++++.
T Consensus 298 ~~a~~i~g~~-~~~~~~~~p~~~---~~~-~----~~~~~~g~~~~~~~~~~~~~~-~~g~~~~~~~~~~~i~G~~~~g~ 367 (384)
T 2v3a_A 298 ALAQTLAGNP-SQVAYGPMPVTV---KTP-A----CPLVVSPPPRGMDGQWLVEGS-GTDLKVLCRDTAGRVIGYALTGA 367 (384)
T ss_dssp HHHHHHTTCC-CCCCCCCCCEEE---CCT-T----SCEEEECCCTTCCCEEEEEEE-TTEEEEEEECTTSCEEEEEEEGG
T ss_pred HHHHHhcCCC-ccCCCCCcceEE---EEC-C----eeEEEecCCCCCCceEEEEec-CCcEEEEEEccCCEEEEEEEECc
Confidence 9999999743 4444 456532 211 1 12555665432 2222333 3457777775 799999998777
Q ss_pred ChHHhhHHHHH
Q 011322 443 SPEEFQLLPTL 453 (488)
Q Consensus 443 ~~~~~~~~~~l 453 (488)
.+.++..+.+.
T Consensus 368 ~a~e~~~~~~~ 378 (384)
T 2v3a_A 368 AVNEKLALNKE 378 (384)
T ss_dssp GGGGHHHHHTT
T ss_pred chHHHHHHHHh
Confidence 77776655443
No 16
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=1.4e-46 Score=385.84 Aligned_cols=403 Identities=20% Similarity=0.298 Sum_probs=305.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
++||+|||||+||++||..|++.+. ..+|+|||+++..+|.++.++. ++.........+ .....+++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~l-----------~~~~~~~~ 102 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDE-NANVVTLEKGEIYSYAQCGLPY-VISGAIASTEKL-----------IARNVKTF 102 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCT-TCEEEEECSSSCCSBCGGGHHH-HHTTSSSCGGGG-----------BSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCCCCCCCcch-hhcCCcCCHHHh-----------hhcCHHHH
Confidence 4699999999999999999999742 4489999999887776544332 111111111111 12345566
Q ss_pred -HHCCcEEEeCCcEEEEeCCCcEEEeCC---Cc--EEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhh
Q 011322 131 -KEKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (488)
Q Consensus 131 -~~~~v~~~~~~~v~~id~~~~~v~~~~---g~--~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 204 (488)
+..+++++.+++|+.++.+.+.+.+.+ |+ ++.||+||+|||+.+. .|+++|.+.++++++++..+...+.+.+
T Consensus 103 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~~ 181 (480)
T 3cgb_A 103 RDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV-MPEWEGRDLQGVHLLKTIPDAERILKTL 181 (480)
T ss_dssp HHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCBTTTSBTEECCSSHHHHHHHHHHH
T ss_pred HhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc-CCCCCCccCCCEEEeCCHHHHHHHHHHh
Confidence 445999999889999999888887753 66 7999999999999886 4667776667888888888887777666
Q ss_pred h--cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCc
Q 011322 205 E--KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGR 282 (488)
Q Consensus 205 ~--~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~ 282 (488)
. .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.+++++.+ +.
T Consensus 182 ~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~ 258 (480)
T 3cgb_A 182 ETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-IYDGDMAEYIYKEADKHHIEILTNENVKAFKGN--ER 258 (480)
T ss_dssp HSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-SSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SB
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-cCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--Cc
Confidence 5 789999999999999999999999999999999999887 489999999999999999999999999999853 44
Q ss_pred EEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHH
Q 011322 283 VAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVD 361 (488)
Q Consensus 283 v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~ 361 (488)
+..+.++ +.++++|.||+|+|++|+.+++++.|+..+ +|+|.||+++||+.|+|||+|||+..+....|......++.
T Consensus 259 v~~v~~~-~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~ 337 (480)
T 3cgb_A 259 VEAVETD-KGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGT 337 (480)
T ss_dssp EEEEEET-TEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHH
T ss_pred EEEEEEC-CCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchHH
Confidence 5456665 457999999999999999999999998875 67899999999999999999999987665445443455788
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC-CCCceeEeccccCCCCcceeeeEeeCCCC-------cE---EEEcc--C------CC
Q 011322 362 HARQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ET---IEIGN--F------DP 422 (488)
Q Consensus 362 ~A~~~g~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~g~~~~-------~~---~~~~~--~------~~ 422 (488)
.|..||+.+|.+|++.. .++. ..+++|+.+++.. +..+|.... +. ..... . ..
T Consensus 338 ~A~~qg~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 409 (480)
T 3cgb_A 338 TANKQGRLAGLNMLDKR-RAFKGTLGTGIIKFMNLT-------LARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKP 409 (480)
T ss_dssp HHHHHHHHHHHHHTTCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCE
T ss_pred HHHHHHHHHHHHhcCCC-ccCCCccceeEEEECCcE-------EEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCce
Confidence 89999999999999743 3443 3456677777643 556665422 11 11111 0 12
Q ss_pred cEEEEEEE--CCEEEEEEeecCC-hHHhh-HHHHHHhcCCCCC-hhh--hcCCCcHHHHHHHHH
Q 011322 423 KIATFWID--SGKLKGVLVESGS-PEEFQ-LLPTLARSQPFVD-KAK--LQQASSVEEALEIAR 479 (488)
Q Consensus 423 ~~~~~~~~--~~~~~g~~~~~~~-~~~~~-~~~~l~~~~~~~~-~~~--~~~~~~~~~~~~~~~ 479 (488)
.+.+++++ +++|+|+++++.. +.+.. .+..+|+++.+++ ... +..||+++|++....
T Consensus 410 ~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~ 473 (480)
T 3cgb_A 410 LYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAPPYNSVWDPIQ 473 (480)
T ss_dssp EEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSCHHH
T ss_pred EEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCCCCCCchhHHH
Confidence 36677764 6999999987776 65544 5566789998887 333 357899998765543
No 17
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=3.3e-47 Score=387.47 Aligned_cols=402 Identities=19% Similarity=0.254 Sum_probs=305.3
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (488)
+||||||||+||++||..|++.+. +.+|+|||+++..+|....+.. ++.........+ .....++++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~ 67 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHP-DAEIQWYEKGDFISFLSAGMQL-YLEGKVKDVNSV-----------RYMTGEKME 67 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TSEEEEEESSSSSSBCGGGHHH-HHTTSSCCGGGS-----------BSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHhCc-CCeEEEEECCCccCcccccchh-hhcCccCCHHHh-----------hcCCHHHHH
Confidence 489999999999999999999842 3489999999877664322211 111110011111 234567888
Q ss_pred HCCcEEEeCCcEEEEeCCCcEEEeCC---Cc--EEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhh-
Q 011322 132 EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE- 205 (488)
Q Consensus 132 ~~~v~~~~~~~v~~id~~~~~v~~~~---g~--~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~- 205 (488)
+.+++++.+++|+.++.+.++|.+.+ |+ ++.||+||||||+.|. .|+++|.+.++++++++..+...+.+.+.
T Consensus 68 ~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~ 146 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPF-ELDIPGKDLDNIYLMRGRQWAIKLKQKTVD 146 (447)
T ss_dssp HTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCSTTTTSBSEECCCHHHHHHHHHHHHTC
T ss_pred HCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcC-CCCCCCCCCCCeEEECCHHHHHHHHHHhhh
Confidence 89999988999999999888888754 65 4899999999999886 46677766678888888888877777666
Q ss_pred -cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEE
Q 011322 206 -KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (488)
Q Consensus 206 -~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~ 284 (488)
.+++++|||+|++|+|+|..|++.|.+|+++++.++++++.+++++.+.+.+.+++.||++++++.+++++.+ +.+.
T Consensus 147 ~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~ 224 (447)
T 1nhp_A 147 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGD--GRVQ 224 (447)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEE
Confidence 7899999999999999999999999999999999999886789999999999999999999999999999853 3333
Q ss_pred EEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHH
Q 011322 285 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 363 (488)
Q Consensus 285 ~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A 363 (488)
.+.+ +++++++|.||+|+|.+|+.++++.. +..+ +|+|.||+++||+.|+|||+|||+..+....+......++..|
T Consensus 225 ~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A 302 (447)
T 1nhp_A 225 KVVT-DKNAYDADLVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNA 302 (447)
T ss_dssp EEEE-SSCEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHH
T ss_pred EEEE-CCCEEECCEEEECcCCCCChHHHHhh-hhhcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHH
Confidence 4555 56789999999999999999988877 7664 5779999999999999999999998765544544445688899
Q ss_pred HHHHHHHHHHHhcCCCCCCC-CCCceeEeccccCCCCcceeeeEeeCCCCc-------EE---E--Ecc------CCCcE
Q 011322 364 RQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TI---E--IGN------FDPKI 424 (488)
Q Consensus 364 ~~~g~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~---~--~~~------~~~~~ 424 (488)
..||+.+|.||++.. .++. ..+++|+.+++.. +..+|....+ .. . .+. ....+
T Consensus 303 ~~qg~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 374 (447)
T 1nhp_A 303 RKQGRFAVKNLEEPV-KPFPGVQGSSGLAVFDYK-------FASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAW 374 (447)
T ss_dssp HHHHHHHHHTSSSCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEE
T ss_pred HHHHHHHHHhhcCCC-CCCCCccccEEEEECCee-------eEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEE
Confidence 999999999999743 3343 4577888777643 4556643210 10 0 111 01235
Q ss_pred EEEEEE--CCEEEEEEeecCC-hHHhh-HHHHHHhcCCCCCh-hh--hcCCCcHHHHHHHHH
Q 011322 425 ATFWID--SGKLKGVLVESGS-PEEFQ-LLPTLARSQPFVDK-AK--LQQASSVEEALEIAR 479 (488)
Q Consensus 425 ~~~~~~--~~~~~g~~~~~~~-~~~~~-~~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~~~ 479 (488)
.+++++ +++|+|+++++.. +.++. .+..+|+++.+++. .. ++.||+++|++..+.
T Consensus 375 ~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~ 436 (447)
T 1nhp_A 375 FKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAFDKPWNIIN 436 (447)
T ss_dssp EEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTCCSSCHHH
T ss_pred EEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCCcccHHH
Confidence 677665 5899999987776 55544 45667889988873 32 467899988765553
No 18
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=4.8e-46 Score=390.38 Aligned_cols=386 Identities=19% Similarity=0.326 Sum_probs=300.2
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (488)
++|+|||||+||++||..|++.+. +.+|+|||+++..+|.++.++. ++.......... .....+++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~-~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~~~-----------~~~~~~~~~ 68 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSE-TAEIIMFERGEYVSFANCGLPY-HISGEIAQRSAL-----------VLQTPESFK 68 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHH-HHTSSSCCGGGG-----------BCCCHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCCccccccCchH-HhcCCcCChHHh-----------hccCHHHHH
Confidence 689999999999999999999854 5599999999998887655442 221111111110 123445554
Q ss_pred -HCCcEEEeCCcEEEEeCCCcEEEeCC---Cc--EEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhh-
Q 011322 132 -EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL- 204 (488)
Q Consensus 132 -~~~v~~~~~~~v~~id~~~~~v~~~~---g~--~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~- 204 (488)
+.+++++++++|++++++.+.+++.+ |+ ++.||+||||||+.|. .|+++|.+.++++++++..+.+.+.+.+
T Consensus 69 ~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~ipG~~~~~v~~~~~~~~~~~l~~~~~ 147 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPI-VPPIPGVDNPLTHSLRNIPDMDRILQTIQ 147 (565)
T ss_dssp HHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTCCSTTEECCSSHHHHHHHHHHHH
T ss_pred HhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHh
Confidence 58999999999999999998887753 44 6899999999999886 4667887778888888888887776544
Q ss_pred -hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeC-----
Q 011322 205 -EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG----- 278 (488)
Q Consensus 205 -~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~----- 278 (488)
..+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.+++++.+
T Consensus 148 ~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~ 226 (565)
T 3ntd_A 148 MNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT-PVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHV 226 (565)
T ss_dssp HTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT-TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCC
T ss_pred hCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch-hcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccc
Confidence 3568999999999999999999999999999999999998 589999999999999999999999999999862
Q ss_pred -------------CCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceec
Q 011322 279 -------------SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVA 344 (488)
Q Consensus 279 -------------~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a 344 (488)
+++.+ .+.+.+|+++++|.||+|+|++|++++++..|+..+ +|+|.||++++|+.|+|||+|||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 305 (565)
T 3ntd_A 227 ASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAV 305 (565)
T ss_dssp CCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGB
T ss_pred cccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeE
Confidence 23443 567789999999999999999999999998899875 688999999999999999999999
Q ss_pred ccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCC-CceeEeccccCCCCcceeeeEeeCCCCc---------E
Q 011322 345 AFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYL-PYFYSRVFEYEGSPRKVWWQFFGDNVGE---------T 414 (488)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~~~~~-p~~~~~~~~~~g~~~~~~~~~~g~~~~~---------~ 414 (488)
..+....|......++..|..||+.+|+||++.. ..|... |++|+.+|+.. +..+|....+ .
T Consensus 306 ~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~e~~a~~~g~~~~~ 377 (565)
T 3ntd_A 306 EEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE-ERYQGTQGTAICKVFDLA-------VGATGKNEKQLKQAGIAFEK 377 (565)
T ss_dssp CEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEE
T ss_pred eeccccCCceeecccHHHHHHHHHHHHHHhcCCC-ccCCCcccceEEEEcCcE-------EEEecCCHHHHHHcCCCeEE
Confidence 8777666665556688899999999999999754 345554 45556666543 5556654321 1
Q ss_pred EEE---cc--C----CCcEEEEEE--ECCEEEEEEeecCCh-HHhhH-HHHHHhcCCCCC
Q 011322 415 IEI---GN--F----DPKIATFWI--DSGKLKGVLVESGSP-EEFQL-LPTLARSQPFVD 461 (488)
Q Consensus 415 ~~~---~~--~----~~~~~~~~~--~~~~~~g~~~~~~~~-~~~~~-~~~l~~~~~~~~ 461 (488)
... +. . ...+.|+.+ ++++|+|+++++.++ .++.. +..+|+.+.+++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~~ 437 (565)
T 3ntd_A 378 VYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVE 437 (565)
T ss_dssp EEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBHH
T ss_pred EEEecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHH
Confidence 111 10 1 123677777 468999999988877 56554 455578887765
No 19
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=2.1e-44 Score=379.24 Aligned_cols=408 Identities=19% Similarity=0.287 Sum_probs=297.7
Q ss_pred ccCCCCcccccccccccccccccccccccccCCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCC
Q 011322 17 WCPQSPSLHRIRHSSAKNFQRRGFVVAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPAL 96 (488)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l 96 (488)
+..+||.++++....+. +..+++++|||||||+||++||.+|++.+. +.+|+|||+++..+|..+.+
T Consensus 14 ~~~~np~~g~e~~~~~~------------~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~~~~~~~l 80 (588)
T 3ics_A 14 SMTGGQQMGRTLYDDDD------------KDRWGSRKIVVVGGVAGGASVAARLRRLSE-EDEIIMVERGEYISFANCGL 80 (588)
T ss_dssp --------------------------------CCCCEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGH
T ss_pred ccccchhcCccccCccc------------CCcccCCCEEEECCcHHHHHHHHHHHhhCc-CCCEEEEECCCCccccCCCC
Confidence 44677777777532211 113456899999999999999999999843 45999999999988876554
Q ss_pred CccccCCCCCCCCCCCCcccccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeC---CCc--EEEeccEEecCC
Q 011322 97 TKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN---SGK--LLKYGSLIVATG 171 (488)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~---~g~--~i~yd~lVlAtG 171 (488)
+. ++.........+ .......+.++.+++++++++|+.++++.+.+.+. +|+ .+.||+||||||
T Consensus 81 p~-~~~g~~~~~~~~----------~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG 149 (588)
T 3ics_A 81 PY-YIGGVITERQKL----------LVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPG 149 (588)
T ss_dssp HH-HHTTSSCCGGGG----------BSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred ch-hhcCcCCChHHh----------hccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCC
Confidence 32 111111111100 01233445568899999999999999999888774 465 689999999999
Q ss_pred CCCCcCCCCcCC-CCCcEEEecCHHHHHHHHHhh--hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccC
Q 011322 172 CTASRFPEKIGG-YLPGVHYIRDVADADALISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFT 248 (488)
Q Consensus 172 ~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~ 248 (488)
+.+. .|.++|. +.+++++.++..+...+...+ ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++. ++
T Consensus 150 ~~p~-~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~ 227 (588)
T 3ics_A 150 AKPI-VPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-ID 227 (588)
T ss_dssp EEEC-CCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SC
T ss_pred CCCC-CCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CC
Confidence 9886 4566776 678899999988887776654 36899999999999999999999999999999999999986 89
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeC
Q 011322 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVD 327 (488)
Q Consensus 249 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd 327 (488)
+++.+.+.+.+++.||++++++.|++++..+ + .|.+.+|+++++|.||+|+|++|++++++.+|+..+ +|+|.||
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~---~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd 303 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENG-A---VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVN 303 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGG-T---EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCC-C---EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEEC
Confidence 9999999999999999999999999998532 2 477889999999999999999999999999999875 6889999
Q ss_pred CCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCC-CCCCceeEeccccCCCCcceeeeE
Q 011322 328 GQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTY-DYLPYFYSRVFEYEGSPRKVWWQF 406 (488)
Q Consensus 328 ~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~~-~~~p~~~~~~~~~~g~~~~~~~~~ 406 (488)
++++|+.|+|||+|||+..+....|.......+..|..||+.+|++|++.....+ ..+|..+...++.. +..
T Consensus 304 ~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~-------~a~ 376 (588)
T 3ics_A 304 EKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLT-------VAT 376 (588)
T ss_dssp TTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEE-------EEE
T ss_pred CccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeE-------EEE
Confidence 9999999999999999987765555544456788899999999999997222334 34555554444432 444
Q ss_pred eeCCCCc---------EEE---Ecc--C----CCcEEEEEEE--CCEEEEEEeecCC-hHHhhHH-HHHHhcCCCCC
Q 011322 407 FGDNVGE---------TIE---IGN--F----DPKIATFWID--SGKLKGVLVESGS-PEEFQLL-PTLARSQPFVD 461 (488)
Q Consensus 407 ~g~~~~~---------~~~---~~~--~----~~~~~~~~~~--~~~~~g~~~~~~~-~~~~~~~-~~l~~~~~~~~ 461 (488)
+|....+ ... ... . ...+.|+.++ +++|+|+++++.+ ++++... ..+|+.+.+++
T Consensus 377 vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~ 453 (588)
T 3ics_A 377 TGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVL 453 (588)
T ss_dssp EECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTT
T ss_pred ecCCHHHHHHcCCCeEEEEEecCCccccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHH
Confidence 5543211 111 110 0 1246777774 5899999987654 6665544 55678888876
No 20
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=2.4e-42 Score=357.69 Aligned_cols=402 Identities=20% Similarity=0.255 Sum_probs=286.0
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC----CCCCccccC--------------C-CCCCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER----PALTKGYLF--------------P-LDKKP 108 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~----~~l~~~~~~--------------~-~~~~~ 108 (488)
++.++||+|||||+||+++|.+|++.|. +|+|||+++...... +..++.++. . .....
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~ 116 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGG---RQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMT 116 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHH
Confidence 4456899999999999999999999987 899999987421100 000000000 0 00000
Q ss_pred CCCCCcccccCCCCCCCCH---hHH-----HHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCC
Q 011322 109 ARLPGFHTCVGSGGERQTP---EWY-----KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEK 180 (488)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~---~~~-----~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~ 180 (488)
...+...... ........ .++ ++.++++++..++..++. +++.+. ++.+.||+||+|||+.|. .|++
T Consensus 117 ~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~-~p~i 191 (523)
T 1mo9_A 117 EKVVGIKEVV-DLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPG-TLDV 191 (523)
T ss_dssp TCCCCHHHHH-HHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECC-CCCS
T ss_pred hhhhhHHHHH-HHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCC-CCCC
Confidence 0000000000 00000012 455 678999985568888885 577776 778999999999999886 4556
Q ss_pred cCCCCCcEEEecCHHHHHHHH-HhhhcC-CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHH
Q 011322 181 IGGYLPGVHYIRDVADADALI-SSLEKA-KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQL 258 (488)
Q Consensus 181 ~g~~~~~v~~~~~~~~~~~~~-~~~~~~-~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~ 258 (488)
+|.+.+++++. +.+. ...... ++++|||+|.+|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.
T Consensus 192 ~G~~~~~v~~~------~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~ 264 (523)
T 1mo9_A 192 PGVNAKGVFDH------ATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNETRAYVLDR 264 (523)
T ss_dssp TTTTSBTEEEH------HHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHHHHHHHHH
T ss_pred CCcccCcEeeH------HHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHHHHHHHHH
Confidence 66555556543 2233 222234 99999999999999999999999999999999999985 799999999999
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcE--EEEEeCCCc-EEEcCEEEEeecCcCCCh-hhHhcCCccc-CCCEEeCCCCCCC
Q 011322 259 YQQNGVKFVKGASIKNLEAGSDGRV--AAVKLEDGS-TIDADTIVIGIGAKPTVS-PFERVGLNSS-VGGIQVDGQFRTR 333 (488)
Q Consensus 259 l~~~GV~v~~~~~v~~i~~~~~~~v--~~v~~~~g~-~i~~D~vi~a~G~~p~~~-~~~~~gl~~~-~g~i~vd~~~~t~ 333 (488)
+++.||+++++++|++++..+++.+ ..|.+++|+ ++++|.||+|+|++|+++ +++++|+..+ +|+|.||+++||+
T Consensus 265 l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~ 344 (523)
T 1mo9_A 265 MKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTS 344 (523)
T ss_dssp HHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCS
T ss_pred HHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCccC
Confidence 9999999999999999986545543 357788887 899999999999999998 7999999875 6779999999999
Q ss_pred CCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC-CCCCCCceeEeccccCCCCcceeeeEeeCCCC
Q 011322 334 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH-TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 412 (488)
Q Consensus 334 ~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~-~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~ 412 (488)
.|+|||+|||+..+. .+..|..||+.+|.||++.... .+..+|+++..... +..+|....
T Consensus 345 ~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~---------~a~vG~~e~ 405 (523)
T 1mo9_A 345 VPNVYAVGDLIGGPM----------EMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYE---------VSFLGMGEE 405 (523)
T ss_dssp STTEEECGGGGCSSC----------SHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSE---------EEEEECCHH
T ss_pred CCCEEEEeecCCCcc----------cHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCc---------eEEEeCCHH
Confidence 999999999997542 3456999999999999974322 25567775432111 334443321
Q ss_pred -------cEEE----Ec------------------------cCCCcEEEEEEE--CCEEEEEEeecCChHHhh-HHHHHH
Q 011322 413 -------ETIE----IG------------------------NFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLA 454 (488)
Q Consensus 413 -------~~~~----~~------------------------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~l~ 454 (488)
+... .. .....+.+++++ +++|+|+++++..+.++. .+..+|
T Consensus 406 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai 485 (523)
T 1mo9_A 406 EARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLI 485 (523)
T ss_dssp HHHHTTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHH
T ss_pred HHHhCCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHH
Confidence 1111 00 111347788775 599999999877766654 456678
Q ss_pred hcCCCCC--hhh--hcCCCcHHHHHHHHHccCC
Q 011322 455 RSQPFVD--KAK--LQQASSVEEALEIARAALP 483 (488)
Q Consensus 455 ~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~ 483 (488)
+.+.+++ ... ++.||+++|++..+++.+-
T Consensus 486 ~~~~t~~~l~~~~~~~~~Pt~~e~~~~~~~~~~ 518 (523)
T 1mo9_A 486 KQGLTVDELGDMDELFLNPTHFIQLSRLRAGSK 518 (523)
T ss_dssp HTTCBHHHHHTSCCCSSCSCCHHHHHHHHTTCS
T ss_pred HCCCCHHHHHhCCcceECCCHHHHHHHHHHhhH
Confidence 8998886 233 6889999999999987754
No 21
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.7e-42 Score=354.85 Aligned_cols=400 Identities=17% Similarity=0.217 Sum_probs=278.7
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---CC-Ccccc-----------------CCC-CCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---AL-TKGYL-----------------FPL-DKKP 108 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---~l-~~~~~-----------------~~~-~~~~ 108 (488)
++||+|||||+||++||.+|++.|. +|+|||+++....... .. ++.++ ... ....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGM---KTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVT 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 5799999999999999999999987 8999999865321100 00 00000 000 0000
Q ss_pred CCCCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--cEEEeccEEecCCCCCCcCCCCcCC
Q 011322 109 ARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGG 183 (488)
Q Consensus 109 ~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g--~~i~yd~lVlAtG~~~~~~~~~~g~ 183 (488)
.++..+.... .........+++++.+++++.++ +..++....++.+.+| +++.||+||+|||+.|.. |+.++.
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~-~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~-p~~~g~ 156 (468)
T 2qae_A 79 MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGE-GSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTE-LPFLPF 156 (468)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE-EEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECC-BTTBCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCC-CCCCCC
Confidence 0000000000 00000001345567799999875 4457776667777777 679999999999998864 444554
Q ss_pred CCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHH-HHc
Q 011322 184 YLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLY-QQN 262 (488)
Q Consensus 184 ~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l-~~~ 262 (488)
+.+++.+ . +........+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+ ++.
T Consensus 157 ~~~~v~t---~---~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~~ 229 (468)
T 2qae_A 157 DEKVVLS---S---TGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDVTNALVGALAKNE 229 (468)
T ss_dssp CSSSEEC---H---HHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHT
T ss_pred CcCceec---h---HHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-CCHHHHHHHHHHHhhcC
Confidence 4344432 2 233332345799999999999999999999999999999999999984 8999999999999 999
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEeC--CC--cEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCCC
Q 011322 263 GVKFVKGASIKNLEAGSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMP 335 (488)
Q Consensus 263 GV~v~~~~~v~~i~~~~~~~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~ 335 (488)
||+++++++|++++.++++ + .+.+. +| +++++|.||+|+|++|++++ ++++|+..+ +|+|.||+++||+.|
T Consensus 230 gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~ 307 (468)
T 2qae_A 230 KMKFMTSTKVVGGTNNGDS-V-SLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIP 307 (468)
T ss_dssp CCEEECSCEEEEEEECSSS-E-EEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSST
T ss_pred CcEEEeCCEEEEEEEcCCe-E-EEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCC
Confidence 9999999999999865333 3 45554 66 67999999999999999987 788899876 577999999999999
Q ss_pred CEEEEceecc-cCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeEeccccCCCCcceeeeEeeCCCC
Q 011322 336 GIFAIGDVAA-FPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 412 (488)
Q Consensus 336 ~Iya~GD~a~-~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~ 412 (488)
+|||+|||+. .+. .+..|..||+.+|.+|++.. .+ +..+|+ ...++.. +..+|....
T Consensus 308 ~IyA~GD~~~~~~~----------~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~--~~~~~~~-------~a~vG~~e~ 367 (468)
T 2qae_A 308 DVYAIGDVVDKGPM----------LAHKAEDEGVACAEILAGKP-GHVNYGVIPA--VIYTMPE-------VASVGKSED 367 (468)
T ss_dssp TEEECGGGBSSSCS----------CHHHHHHHHHHHHHHHTTCC-CCCCTTSCCE--EECSSSE-------EEEEECCHH
T ss_pred CEEEeeccCCCCCc----------cHhHHHHHHHHHHHHHcCCC-ccCCCCCCCE--EEECCCc-------eEEEeCCHH
Confidence 9999999998 332 45569999999999999743 33 344554 3222221 444554321
Q ss_pred -------cEEEE------------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhcCCCCCh--hhhcCC
Q 011322 413 -------ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDK--AKLQQA 468 (488)
Q Consensus 413 -------~~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~--~~~~~~ 468 (488)
+.... .+....+.+++++ +|+|+|+++++..+.++... ..+|+++.+++. ..++.|
T Consensus 368 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~ 447 (468)
T 2qae_A 368 ELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAH 447 (468)
T ss_dssp HHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCS
T ss_pred HHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCC
Confidence 11110 0112457888886 69999999987777665544 556788888762 335889
Q ss_pred CcHHHHHHHHHccCCc
Q 011322 469 SSVEEALEIARAALPV 484 (488)
Q Consensus 469 ~~~~~~~~~~~~~~~~ 484 (488)
|+++|++..+++++..
T Consensus 448 Pt~~e~~~~~~~~~~~ 463 (468)
T 2qae_A 448 PTMSEALKEACMALFA 463 (468)
T ss_dssp SCTHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHhc
Confidence 9999999999876544
No 22
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.9e-42 Score=354.92 Aligned_cols=402 Identities=17% Similarity=0.230 Sum_probs=280.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---C-Ccccc----------------CCC--CCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---L-TKGYL----------------FPL--DKK 107 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~---l-~~~~~----------------~~~--~~~ 107 (488)
+++||+|||||+||+++|..|++.|. +|+|||+++........ . ++.++ +.. ...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~ 81 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGF---KTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEV 81 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCC
Confidence 45799999999999999999999987 89999998643210000 0 00000 000 000
Q ss_pred CCCCCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCC-C-cEEEeccEEecCCCCCCcCCCCcC
Q 011322 108 PARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-G-KLLKYGSLIVATGCTASRFPEKIG 182 (488)
Q Consensus 108 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~-g-~~i~yd~lVlAtG~~~~~~~~~~g 182 (488)
..++..+.... .........+++++.+++++.+ .+..++....+|.+.+ + +++.||+||+|||+.|.. |+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~-p~i~g 159 (474)
T 1zmd_A 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNG-YGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTP-FPGIT 159 (474)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECC-CTTCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCC-CCCCC
Confidence 00000000000 0000000134566789999987 4556776555676666 4 579999999999998864 44555
Q ss_pred CCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHc
Q 011322 183 GYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN 262 (488)
Q Consensus 183 ~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~ 262 (488)
.+..++.+ ..........+++++|||+|++|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++.
T Consensus 160 ~~~~~v~t------~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~ 233 (474)
T 1zmd_A 160 IDEDTIVS------STGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQ 233 (474)
T ss_dssp CCSSSEEC------HHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHT
T ss_pred CCcCcEEc------HHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHC
Confidence 43333332 222222223578999999999999999999999999999999999998568999999999999999
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEE-----eCCCcEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCC
Q 011322 263 GVKFVKGASIKNLEAGSDGRVAAVK-----LEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRM 334 (488)
Q Consensus 263 GV~v~~~~~v~~i~~~~~~~v~~v~-----~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~ 334 (488)
||+++++++|++++.++++.+ .+. ..+++++++|.||+|+|++|++++ ++++|+..+ +|+|.||+++||+.
T Consensus 234 Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~ 312 (474)
T 1zmd_A 234 GFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKI 312 (474)
T ss_dssp TCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSS
T ss_pred CCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCC
Confidence 999999999999986543323 344 356778999999999999999987 788898876 57799999999999
Q ss_pred CCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeEeccccCCCCcceeeeEeeCCCC-
Q 011322 335 PGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG- 412 (488)
Q Consensus 335 ~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~- 412 (488)
|+|||+|||+..+. .+..|..||+.+|.||++... ..|..+|+++ .++. .+..+|....
T Consensus 313 ~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~-------~~a~vG~~e~~ 373 (474)
T 1zmd_A 313 PNIYAIGDVVAGPM----------LAHKAEDEGIICVEGMAGGAVHIDYNCVPSVI--YTHP-------EVAWVGKSEEQ 373 (474)
T ss_dssp TTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEE--CSSS-------EEEEEECCHHH
T ss_pred CCEEEeeecCCCCc----------cHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEE--ECCC-------CeEEEeCCHHH
Confidence 99999999998542 455699999999999997432 2344566543 2221 1444554322
Q ss_pred ------cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhh-HHHHHHhcCCCCC-h-hhhcCCC
Q 011322 413 ------ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD-K-AKLQQAS 469 (488)
Q Consensus 413 ------~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~l~~~~~~~~-~-~~~~~~~ 469 (488)
+... . .+....|.+++++ +++|+|+++++..+.++. .+..+|+++.+++ . ..++.||
T Consensus 374 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~P 453 (474)
T 1zmd_A 374 LKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHP 453 (474)
T ss_dssp HHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTT
T ss_pred HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCC
Confidence 1111 0 0112458888886 699999998777766644 5566788888876 2 3358899
Q ss_pred cHHHHHHHHHccC
Q 011322 470 SVEEALEIARAAL 482 (488)
Q Consensus 470 ~~~~~~~~~~~~~ 482 (488)
+++|++..++.++
T Consensus 454 t~~e~~~~~~~~~ 466 (474)
T 1zmd_A 454 TLSEAFREANLAA 466 (474)
T ss_dssp CTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999998654
No 23
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.5e-42 Score=357.69 Aligned_cols=400 Identities=19% Similarity=0.232 Sum_probs=283.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCC---CCC-Ccccc----------------CC--CC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYER---PAL-TKGYL----------------FP--LD 105 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~---g~~~~~V~lie~~~~~~~~~---~~l-~~~~~----------------~~--~~ 105 (488)
++||||||||+||++||.+|++. |. +|+|||+++ ..... ... ++.++ .. ..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~---~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~ 77 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETT---QVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFD 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTE---EEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcC---EEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 47999999999999999999998 76 899999986 21100 000 00000 00 00
Q ss_pred CCCCCCCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeC------CCcEEEeCCCc--EEEeccEEecCCCCC
Q 011322 106 KKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDI------EKQTLITNSGK--LLKYGSLIVATGCTA 174 (488)
Q Consensus 106 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~------~~~~v~~~~g~--~i~yd~lVlAtG~~~ 174 (488)
....++....... .........+++++.+++++.+ .+..+++ ....|.+.+|+ .+.||+||+|||+.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 78 DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAG-RGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp --CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 0000000000000 0000001235567789999987 5777877 22345556676 799999999999988
Q ss_pred CcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHH
Q 011322 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (488)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~ 254 (488)
. .|++++.+..++.+..+.. .....+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.
T Consensus 157 ~-~p~i~g~~~~~v~~~~~~~------~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~ 228 (499)
T 1xdi_A 157 R-ILPSAQPDGERILTWRQLY------DLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADAALV 228 (499)
T ss_dssp C-CCGGGCCCSSSEEEGGGGG------GCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHHHHH
T ss_pred C-CCCCCCCCcCcEEehhHhh------hhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHH
Confidence 6 4555665555565543322 22235789999999999999999999999999999999999986 89999999
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCC
Q 011322 255 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFR 331 (488)
Q Consensus 255 ~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~ 331 (488)
+.+.+++.||+++++++|++++.++ +.+ .+.+.+|+++++|.||+|+|++|++++ ++++|+..+ +|+|.||+++|
T Consensus 229 l~~~l~~~GV~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~ 306 (499)
T 1xdi_A 229 LEESFAERGVRLFKNARAASVTRTG-AGV-LVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSR 306 (499)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSB
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC-CEE-EEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcc
Confidence 9999999999999999999998643 334 577888989999999999999999988 788898876 47799999999
Q ss_pred CCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeEeccccCCCCcceeeeEeeC
Q 011322 332 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGD 409 (488)
Q Consensus 332 t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~g~ 409 (488)
|+.|+|||+|||+..+. .+..|..||+.+|.+|++.... .|..+|+++ .++. .+..+|.
T Consensus 307 t~~~~IyA~GD~~~~~~----------l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~~-------~~a~vG~ 367 (499)
T 1xdi_A 307 TLATGIYAAGDCTGLLP----------LASVAAMQGRIAMYHALGEGVSPIRLRTVAATV--FTRP-------EIAAVGV 367 (499)
T ss_dssp CSSTTEEECSGGGTSCS----------CHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEE--CSSS-------EEEEEES
T ss_pred cCCCCEEEEeccCCCcc----------cHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEE--EecC-------CceEeCC
Confidence 99999999999998542 3556999999999999975222 344566532 2221 1455665
Q ss_pred CCC-------cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhh-HHHHHHhcCCCCCh--hhh
Q 011322 410 NVG-------ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVDK--AKL 465 (488)
Q Consensus 410 ~~~-------~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~l~~~~~~~~~--~~~ 465 (488)
... +... . .+....+.+++++ +|+|+|+++++..+.++. .+..+|+++.+++. ..+
T Consensus 368 ~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~ 447 (499)
T 1xdi_A 368 PQSVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTL 447 (499)
T ss_dssp CHHHHHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSB
T ss_pred CHHHHHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhccc
Confidence 432 1111 0 0112457888886 599999999877777655 44556788888862 335
Q ss_pred cCCCcHHHHHHHHHccCCc
Q 011322 466 QQASSVEEALEIARAALPV 484 (488)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~ 484 (488)
+.||+++|++..+++++..
T Consensus 448 ~~~Pt~~e~~~~~~~~~~~ 466 (499)
T 1xdi_A 448 AVYPSLSGSITEAARRLMA 466 (499)
T ss_dssp CCSSSTHHHHHHHHHHHCC
T ss_pred ccCCCchHHHHHHHHHHhc
Confidence 8889999999999876553
No 24
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=7.5e-42 Score=349.88 Aligned_cols=397 Identities=17% Similarity=0.209 Sum_probs=279.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---------------------CCCCCccc-cCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---------------------RPALTKGY-LFPLDKK 107 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~---------------------~~~l~~~~-~~~~~~~ 107 (488)
.++||+|||||+||+++|.+|++.|. +|+|||++.. ... .+.... + -......
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~~-GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~-~~g~~~~~~ 77 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGA---QVTLIERGTI-GGTCVNVGCVPSKIMIRAAHIAHLRRESPF-DGGIAATVP 77 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSST-THHHHHHSHHHHHHHHHHHHHHHHHHCCTT-TTTSCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCCC-CccccCCCccchHHHHHHHHHHHHHhhhhh-cCCccCCCC
Confidence 46899999999999999999999987 8999999831 100 000000 0 0000000
Q ss_pred CCCCCCcccccC---CCCC-CCCHhHHHHC-CcEEEeCCcEEEEeCCCcEEEeCCC--cEEEeccEEecCCCCCCcCCCC
Q 011322 108 PARLPGFHTCVG---SGGE-RQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEK 180 (488)
Q Consensus 108 ~~~~~~~~~~~~---~~~~-~~~~~~~~~~-~v~~~~~~~v~~id~~~~~v~~~~g--~~i~yd~lVlAtG~~~~~~~~~ 180 (488)
..++..+..... .... ....+++++. +++++.+ ++..++....+|.+.+| +++.||+||||||+.|. .|++
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~-~p~i 155 (467)
T 1zk7_A 78 TIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPA-VPPI 155 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEETTEEEEEETTSSEEEEECSEEEECCCEEEC-CCCC
T ss_pred ccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCC-CCCC
Confidence 000000000000 0000 0123445566 8999886 68888877677777788 67999999999999886 4555
Q ss_pred cCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHH
Q 011322 181 IGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ 260 (488)
Q Consensus 181 ~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~ 260 (488)
+|.+..++. + .+.+.+....+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ +++++.+.+.+.++
T Consensus 156 ~G~~~~~~~---~---~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~ 227 (467)
T 1zk7_A 156 PGLKESPYW---T---STEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVTAAFR 227 (467)
T ss_dssp TTTTTSCCB---C---HHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHHHHHH
T ss_pred CCCCcCcee---c---HHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHHHHHH
Confidence 664332222 2 333344344689999999999999999999999999999999999987 79999999999999
Q ss_pred HcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCCCCE
Q 011322 261 QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGI 337 (488)
Q Consensus 261 ~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~I 337 (488)
+.||+++++++|++++.+ ++ ...+.++ +.++++|.||+|+|.+|++++ ++..++..+ +|+|.||++++|+.|+|
T Consensus 228 ~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~i 304 (467)
T 1zk7_A 228 AEGIEVLEHTQASQVAHM-DG-EFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNI 304 (467)
T ss_dssp HTTCEEETTCCEEEEEEE-TT-EEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTE
T ss_pred hCCCEEEcCCEEEEEEEe-CC-EEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCE
Confidence 999999999999999854 23 2356665 457999999999999999875 578888876 56799999999999999
Q ss_pred EEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeEeccccCCCCcceeeeEeeCCCC----
Q 011322 338 FAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG---- 412 (488)
Q Consensus 338 ya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~---- 412 (488)
||+|||+..+. .+..|..||+.+|.||++... ..+..+|++ ..++. .+.++|....
T Consensus 305 ya~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~-------~~a~vG~~~~~a~~ 365 (467)
T 1zk7_A 305 YAAGDCTDQPQ----------FVYVAAAAGTRAAINMTGGDAALDLTAMPAV--VFTDP-------QVATVGYSEAEAHH 365 (467)
T ss_dssp EECSTTBSSCC----------CHHHHHHHHHHHHHHHTTCCCCCCCTTCEEE--ECSSS-------EEEEEECCHHHHHH
T ss_pred EEEeccCCCcc----------cHHHHHHHHHHHHHHHcCCCcccCCCCCCEE--EecCC-------ceEEEecCHHHHHh
Confidence 99999998653 456799999999999997532 234445543 22221 1444554321
Q ss_pred ---cEEE-E-----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhh-HHHHHHhcCCCCCh--hhhcCCCcHH
Q 011322 413 ---ETIE-I-----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVDK--AKLQQASSVE 472 (488)
Q Consensus 413 ---~~~~-~-----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~l~~~~~~~~~--~~~~~~~~~~ 472 (488)
+... . ......+.+++++ +|+|+|+++++..+.+.. .+..+|+++.+++. ...+.|||++
T Consensus 366 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~ 445 (467)
T 1zk7_A 366 DGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMV 445 (467)
T ss_dssp TTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTT
T ss_pred cCCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHH
Confidence 1111 0 0112457888886 699999998777776655 45667888888762 3358899999
Q ss_pred HHHHHHHccCC
Q 011322 473 EALEIARAALP 483 (488)
Q Consensus 473 ~~~~~~~~~~~ 483 (488)
|++..+++++.
T Consensus 446 e~~~~~~~~~~ 456 (467)
T 1zk7_A 446 EGLKLAAQTFN 456 (467)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999988654
No 25
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-42 Score=351.96 Aligned_cols=397 Identities=19% Similarity=0.227 Sum_probs=275.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------CC--C-C-c---cccCCCCCCCCCC-----
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------PA--L-T-K---GYLFPLDKKPARL----- 111 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~------~~--l-~-~---~~~~~~~~~~~~~----- 111 (488)
.++||+|||||+||+++|..|++.|. +|+|||++.. .... |. + . . ..+..........
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~---~V~liE~~~~-GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 85 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGA---KTLLVEAKAL-GGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLD 85 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSC---CEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCC---cEEEEeCCCc-CCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccc
Confidence 45799999999999999999999887 8999999742 1000 00 0 0 0 0000000000000
Q ss_pred ---CCccc--ccC------CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCc--EEEeccEEecCCCCCCcCC
Q 011322 112 ---PGFHT--CVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTASRFP 178 (488)
Q Consensus 112 ---~~~~~--~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~--~i~yd~lVlAtG~~~~~~~ 178 (488)
..+.. ... ..........+++.+++++.+ .+..+++....+.+.+|+ ++.||+||||||+.|.. |
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~-p 163 (479)
T 2hqm_A 86 KEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFG-WARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIF-P 163 (479)
T ss_dssp GGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE-EEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECC-C
T ss_pred cccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC-C
Confidence 00000 000 000000123345679999886 577777666667777776 79999999999998863 4
Q ss_pred -CCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHH
Q 011322 179 -EKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQ 257 (488)
Q Consensus 179 -~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~ 257 (488)
+++|.+ . .. +++.+......+++++|||+|.+|+|+|..|.++|.+|+++++.+++++. +++++.+.+.+
T Consensus 164 ~~i~g~~--~---~~---~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~ 234 (479)
T 2hqm_A 164 ENIPGFE--L---GT---DSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNTITD 234 (479)
T ss_dssp TTSTTGG--G---SB---CHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHH
T ss_pred CCCCCcc--c---cc---chHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-cCHHHHHHHHH
Confidence 444421 1 11 23344443456799999999999999999999999999999999999974 89999999999
Q ss_pred HHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCC-cEEEcCEEEEeecCcCCChh-hHhcCCccc-CCCEEeCCCCCCCC
Q 011322 258 LYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-STIDADTIVIGIGAKPTVSP-FERVGLNSS-VGGIQVDGQFRTRM 334 (488)
Q Consensus 258 ~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g-~~i~~D~vi~a~G~~p~~~~-~~~~gl~~~-~g~i~vd~~~~t~~ 334 (488)
.+++.||+++++++|++++..+++.+..+.+++| +++++|.||+|+|++|++.+ ++..|+..+ +|+|.||++++|+.
T Consensus 235 ~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t~~ 314 (479)
T 2hqm_A 235 HYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQNTNV 314 (479)
T ss_dssp HHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCBCSS
T ss_pred HHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCccCC
Confidence 9999999999999999998654443346888899 78999999999999999877 788899876 67899999999999
Q ss_pred CCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCC---C--CCCCCCCceeEeccccCCCCcceeeeEeeC
Q 011322 335 PGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ---T--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGD 409 (488)
Q Consensus 335 ~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~---~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~ 409 (488)
|+|||+|||+..+. .+..|..||+.+|.||++.. . ..|..+|+. .|..+- +..+|.
T Consensus 315 ~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~---~~~~~~------~~~vGl 375 (479)
T 2hqm_A 315 PNIYSLGDVVGKVE----------LTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSV---IFSHPE------AGSIGI 375 (479)
T ss_dssp TTEEECGGGTTSSC----------CHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEE---ECCSSC------EEEEEC
T ss_pred CCEEEEEecCCCcc----------cHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeE---EECCCC------eEEEeC
Confidence 99999999986432 56679999999999999743 2 234445642 222111 333443
Q ss_pred CCCc---------EEEE------------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHHHH-HHhcCCCCC-h-h
Q 011322 410 NVGE---------TIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLLPT-LARSQPFVD-K-A 463 (488)
Q Consensus 410 ~~~~---------~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~~~-~-~ 463 (488)
...+ .... ......+.+++++ +++|+|+++++.++.++..... +++.+.+++ . .
T Consensus 376 ~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~ 455 (479)
T 2hqm_A 376 SEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDN 455 (479)
T ss_dssp CHHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHT
T ss_pred CHHHHHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhh
Confidence 2110 1110 0112347777775 5899999998777777666544 578888776 2 3
Q ss_pred hhcCCCcHHHHHHHHHc
Q 011322 464 KLQQASSVEEALEIARA 480 (488)
Q Consensus 464 ~~~~~~~~~~~~~~~~~ 480 (488)
.++.|||++|++..++.
T Consensus 456 ~~~~hPt~~e~~~~~~~ 472 (479)
T 2hqm_A 456 CVAIHPTSAEELVTMRG 472 (479)
T ss_dssp SCCCSSCSGGGGGSCC-
T ss_pred CcCCCCChHHHHHHHHH
Confidence 35889999999876653
No 26
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1.7e-42 Score=354.32 Aligned_cols=399 Identities=20% Similarity=0.245 Sum_probs=274.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---CCC-CccccCC------C--CCCCCCCC-----C
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---PAL-TKGYLFP------L--DKKPARLP-----G 113 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~---~~l-~~~~~~~------~--~~~~~~~~-----~ 113 (488)
++||+|||||+||+++|..|++.|. +|+|||++.. .... ... ++.++.. . ......++ .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~---~V~liE~~~~-gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGL---STAIVEPKYW-GGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFD 78 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCC-CCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccC
Confidence 4799999999999999999999987 8999999731 1000 000 0000000 0 00000000 0
Q ss_pred cccccC------CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--cEEEeccEEecCCCCCCcCCCCcCCCC
Q 011322 114 FHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYL 185 (488)
Q Consensus 114 ~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g--~~i~yd~lVlAtG~~~~~~~~~~g~~~ 185 (488)
+..... ........+++++.+++++.++.+. ++....++.+.+| +++.||+||+|||+.+.. |+.++.+.
T Consensus 79 ~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~-~~~~g~~~ 156 (464)
T 2a8x_A 79 YGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-ADANTLLVDLNDGGTESVTFDNAIIATGSSTRL-VPGTSLSA 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-SSSSEEEEEETTSCCEEEEEEEEEECCCEEECC-CTTCCCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCCCCc
Confidence 000000 0000001345567899999875443 5544445666777 679999999999998864 44444322
Q ss_pred CcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcE
Q 011322 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265 (488)
Q Consensus 186 ~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~ 265 (488)
. + .+.. ........+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||+
T Consensus 157 ~-~---~~~~---~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~ 228 (464)
T 2a8x_A 157 N-V---VTYE---EQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-NEDADVSKEIEKQFKKLGVT 228 (464)
T ss_dssp T-E---ECHH---HHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCE
T ss_pred e-E---EecH---HHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHcCCE
Confidence 1 2 2222 2333233579999999999999999999999999999999999998 48999999999999999999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEeC-CC--cEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCCCCEEE
Q 011322 266 FVKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFA 339 (488)
Q Consensus 266 v~~~~~v~~i~~~~~~~v~~v~~~-~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya 339 (488)
+++++++++++.+++ .+ .+.+. +| +++++|.|++|+|++|++++ ++++|+..+ +|+|.||+++||+.|+|||
T Consensus 229 i~~~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA 306 (464)
T 2a8x_A 229 ILTATKVESIADGGS-QV-TVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYA 306 (464)
T ss_dssp EECSCEEEEEEECSS-CE-EEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEE
T ss_pred EEeCcEEEEEEEcCC-eE-EEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEE
Confidence 999999999986433 33 45554 56 67999999999999999987 788899876 5779999999999999999
Q ss_pred EceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC---CCCCCceeEeccccCCCCcceeeeEeeCCCC----
Q 011322 340 IGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT---YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG---- 412 (488)
Q Consensus 340 ~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~---~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~---- 412 (488)
+|||+..+. .+..|..||+.+|.||++....+ |..+|++ ..++.. +..+|....
T Consensus 307 ~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~--~~~~~~-------~a~vG~~e~~a~~ 367 (464)
T 2a8x_A 307 IGDVNGLLQ----------LAHVAEAQGVVAAETIAGAETLTLGDHRMLPRA--TFCQPN-------VASFGLTEQQARN 367 (464)
T ss_dssp CGGGGCSSC----------SHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEE--ECSSSE-------EEEEECCHHHHHH
T ss_pred eECcCCCcc----------CHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEE--EECCCC-------eEEEcCCHHHHHh
Confidence 999998532 45569999999999999733333 4445643 222211 344554321
Q ss_pred ---cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhcCCCCCh--hhhcCCCcHH
Q 011322 413 ---ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDK--AKLQQASSVE 472 (488)
Q Consensus 413 ---~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~--~~~~~~~~~~ 472 (488)
+... . .+....+.+++++ +++|+|+++++..+.++... ..+|+++.+++. ..++.||+++
T Consensus 368 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~ 447 (464)
T 2a8x_A 368 EGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMS 447 (464)
T ss_dssp TTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTT
T ss_pred cCCCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChH
Confidence 1111 0 0112457888885 69999999987777665544 556788888762 3358889999
Q ss_pred HHHHHHHccCCc
Q 011322 473 EALEIARAALPV 484 (488)
Q Consensus 473 ~~~~~~~~~~~~ 484 (488)
|++..+++++..
T Consensus 448 e~~~~~~~~~~~ 459 (464)
T 2a8x_A 448 EALQECFHGLVG 459 (464)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 999999876543
No 27
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=5.5e-43 Score=359.46 Aligned_cols=399 Identities=17% Similarity=0.219 Sum_probs=273.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---CCC-Cccc----------------cCCCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---PAL-TKGY----------------LFPLDKKPA 109 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~---~~l-~~~~----------------~~~~~~~~~ 109 (488)
.++||+|||||+||+++|..|++.|. +|+|||+++...... ... ++.+ -........
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~ 81 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGL---KVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPEL 81 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCcc
Confidence 35799999999999999999999987 799999975432100 000 0000 000000000
Q ss_pred CCCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC------------cEEEeccEEecCCCCC
Q 011322 110 RLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG------------KLLKYGSLIVATGCTA 174 (488)
Q Consensus 110 ~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g------------~~i~yd~lVlAtG~~~ 174 (488)
++....... ..........++++.+++++.++.+. ++.....+.+.+| .++.||+||+|||+.+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p 160 (482)
T 1ojt_A 82 DIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRV 160 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCC
Confidence 000000000 00000001234567899999875443 5543334444455 5799999999999988
Q ss_pred CcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHH
Q 011322 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (488)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~ 254 (488)
..++.++. + ..+. +.. ........+++++|||+|++|+|+|..|.++|.+|+++++.+++++. +++++.+.
T Consensus 161 ~~~~~i~~-~-~~v~---~~~---~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~ 231 (482)
T 1ojt_A 161 TKLPFIPE-D-PRII---DSS---GALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-ADRDLVKV 231 (482)
T ss_dssp CCCSSCCC-C-TTEE---CHH---HHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHH
T ss_pred CCCCCCCc-c-CcEE---cHH---HHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-cCHHHHHH
Confidence 64432332 1 1332 222 23222335799999999999999999999999999999999999985 89999999
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC----CcEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeC
Q 011322 255 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED----GSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVD 327 (488)
Q Consensus 255 ~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~----g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd 327 (488)
+.+.+++.||++++++++++++.+++ . ..+.+.+ |+++++|.|++|+|++|++++ ++++|+..+ +|+|.||
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~~-~-~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd 309 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKED-G-VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVD 309 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEETT-E-EEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCC
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcCC-e-EEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeC
Confidence 99999999999999999999985432 2 3566666 778999999999999999987 688899876 4779999
Q ss_pred CCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeEeccccCCCCcceeee
Q 011322 328 GQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQ 405 (488)
Q Consensus 328 ~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~ 405 (488)
+++||+.|+|||+|||+..+. .+..|..||+.+|.||++.. .+ +..+|+ ...++.+ +.
T Consensus 310 ~~~~t~~~~IyA~GD~~~~~~----------l~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~--~~~~~~~-------~a 369 (482)
T 1ojt_A 310 KQMRTNVPHIYAIGDIVGQPM----------LAHKAVHEGHVAAENCAGHK-AYFDARVIPG--VAYTSPE-------VA 369 (482)
T ss_dssp TTSBCSSTTEEECGGGTCSSC----------CHHHHHHHHHHHHHHHTTCC-CCCCCCCCCE--EECSSSC-------EE
T ss_pred CCcccCCCCEEEEEcccCCCc----------cHHHHHHHHHHHHHHHcCCC-ccCCCCCCCE--EEEcCCC-------eE
Confidence 999999999999999998532 45569999999999999743 33 344554 2222221 44
Q ss_pred EeeCCCC-------cEEE--E----------ccCCCcEEEEEE--ECCEEEEEEeecCChHHhhHH-HHHHhcCCCCC-h
Q 011322 406 FFGDNVG-------ETIE--I----------GNFDPKIATFWI--DSGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K 462 (488)
Q Consensus 406 ~~g~~~~-------~~~~--~----------~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~-~ 462 (488)
.+|.... +... . .+....|.++++ ++++|+|+++++..+.++... ..+|+++.+++ .
T Consensus 370 ~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l 449 (482)
T 1ojt_A 370 WVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADI 449 (482)
T ss_dssp EEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHH
T ss_pred EEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHH
Confidence 4554321 1111 0 011245888888 469999999977777666555 55678888876 2
Q ss_pred -hhhcCCCcHHHHHHHHHccCC
Q 011322 463 -AKLQQASSVEEALEIARAALP 483 (488)
Q Consensus 463 -~~~~~~~~~~~~~~~~~~~~~ 483 (488)
..++.|||++|++..+++++.
T Consensus 450 ~~~~~~~Pt~~e~~~~a~~~~~ 471 (482)
T 1ojt_A 450 GKTIHPHPTLGESIGMAAEVAL 471 (482)
T ss_dssp HTSCCCSSSSTTHHHHHHHHHH
T ss_pred hcCccCCCCHHHHHHHHHHHHh
Confidence 335889999999999987654
No 28
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.2e-42 Score=353.16 Aligned_cols=402 Identities=19% Similarity=0.284 Sum_probs=278.2
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---C-Ccccc-----------------CCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---L-TKGYL-----------------FPLDKK 107 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~---l-~~~~~-----------------~~~~~~ 107 (488)
+.++||+|||||+||+++|..|++.|+ +|+|||+++........ . ++.++ ......
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~---~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 80 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGF---KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNV 80 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTC---CEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 346899999999999999999999987 89999998654211000 0 00000 000000
Q ss_pred CCCCCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--cEEEeccEEecCCCCCCcCCCCcC
Q 011322 108 PARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIG 182 (488)
Q Consensus 108 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g--~~i~yd~lVlAtG~~~~~~~~~~g 182 (488)
..++..+.... ..........++++.+++++.++.+ .++.....|.+.+| +++.||+||+|||+.|.. |+.++
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~-p~~~g 158 (470)
T 1dxl_A 81 EIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGK-FVSPSEISVDTIEGENTVVKGKHIIIATGSDVKS-LPGVT 158 (470)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-EEETTEEEECCSSSCCEEEECSEEEECCCEEECC-BTTBC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-EecCCEEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCC
Confidence 00000000000 0000000123456679999998654 47765555655677 679999999999998864 44455
Q ss_pred CCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHc
Q 011322 183 GYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN 262 (488)
Q Consensus 183 ~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~ 262 (488)
.+.+++.+ ..........+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.+.+++.
T Consensus 159 ~~~~~v~~------~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-~~~~~~~~~l~~~l~~~ 231 (470)
T 1dxl_A 159 IDEKKIVS------STGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-TMDAEIRKQFQRSLEKQ 231 (470)
T ss_dssp CCSSSEEC------HHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHS
T ss_pred CCcccEEe------HHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-cccHHHHHHHHHHHHHc
Confidence 43334432 222222223579999999999999999999999999999999999998 48999999999999999
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEeC---CC--cEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCC
Q 011322 263 GVKFVKGASIKNLEAGSDGRVAAVKLE---DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRM 334 (488)
Q Consensus 263 GV~v~~~~~v~~i~~~~~~~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~ 334 (488)
||++++++++++++.++++ + .+.++ +| +++++|.||+|+|++|++++ ++++|+..+ +|+|.||+++||+.
T Consensus 232 gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~ 309 (470)
T 1dxl_A 232 GMKFKLKTKVVGVDTSGDG-V-KLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNV 309 (470)
T ss_dssp SCCEECSEEEEEEECSSSS-E-EEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSS
T ss_pred CCEEEeCCEEEEEEEcCCe-E-EEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCC
Confidence 9999999999999854333 3 45543 44 67999999999999999987 788898876 57799999999999
Q ss_pred CCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeEeccccCCCCcceeeeEeeCCCC
Q 011322 335 PGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 412 (488)
Q Consensus 335 ~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~ 412 (488)
|+|||+|||+..+. .+..|..||+.+|.+|++. ..+ |..+|+ ...++.. +..+|....
T Consensus 310 ~~Iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~--~~~~~~~-------~a~vG~~e~ 369 (470)
T 1dxl_A 310 SGVYAIGDVIPGPM----------LAHKAEEDGVACVEYLAGK-VGHVDYDKVPG--VVYTNPE-------VASVGKTEE 369 (470)
T ss_dssp TTEEECSTTSSSCC----------CHHHHHHHHHHHHHHHTTS-CCCCCTTSCCE--EECSSSE-------EEEEECCHH
T ss_pred CCEEEEeccCCCCc----------cHHHHHHHHHHHHHHHcCC-CcCCCCCCCCE--EEECCCc-------eEEEcCCHH
Confidence 99999999997532 4556999999999999974 333 344553 3333221 444554321
Q ss_pred -------cEEEE------------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhcCCCCCh--hhhcCC
Q 011322 413 -------ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDK--AKLQQA 468 (488)
Q Consensus 413 -------~~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~--~~~~~~ 468 (488)
+.... ......+.+++++ +++|+|+++++..+.++... ..+|+++.+++. ..++.|
T Consensus 370 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~ 449 (470)
T 1dxl_A 370 QVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAH 449 (470)
T ss_dssp HHHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCS
T ss_pred HHHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCC
Confidence 11110 0112457888886 69999999987777665544 556788888762 335888
Q ss_pred CcHHHHHHHHHccCCc
Q 011322 469 SSVEEALEIARAALPV 484 (488)
Q Consensus 469 ~~~~~~~~~~~~~~~~ 484 (488)
|+++|++..+++++..
T Consensus 450 Pt~~e~~~~~~~~~~~ 465 (470)
T 1dxl_A 450 PTMSEAIKEAAMATYD 465 (470)
T ss_dssp SCTTHHHHHHHHHHHS
T ss_pred CChHHHHHHHHHHHhc
Confidence 9999999999876543
No 29
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.4e-42 Score=351.28 Aligned_cols=396 Identities=21% Similarity=0.277 Sum_probs=273.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-Ccccc----------------CCCCCCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TKGYL----------------FPLDKKPAR 110 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~---~~~l-~~~~~----------------~~~~~~~~~ 110 (488)
++||+|||||+||++||.+|++.|. +|+|||++. .... .... ++.++ ........+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~-~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 78 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQ---KVTIVEKGN-LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTID 78 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEECCC-CCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 4789999999999999999999987 899999973 2100 0000 00000 000000000
Q ss_pred CCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC-cEEEeccEEecCCCCCCcCCCCcCCCCC
Q 011322 111 LPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGYLP 186 (488)
Q Consensus 111 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g-~~i~yd~lVlAtG~~~~~~~~~~g~~~~ 186 (488)
+..+.... .........+++++.+++++.++.+ .++.....+.+.+| +++.||+||+|||+.|.. |+.++.+..
T Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~-~~~~g~~~~ 156 (455)
T 1ebd_A 79 FAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAY-FVDANTVRVVNGDSAQTYTFKNAIIATGSRPIE-LPNFKFSNR 156 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEE-EEETTEEEEEETTEEEEEECSEEEECCCEEECC-BTTBCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-EccCCeEEEEeCCCcEEEEeCEEEEecCCCCCC-CCCCCccce
Confidence 00000000 0000000123556679999987544 47766566777777 679999999999998864 444443221
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEE
Q 011322 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 266 (488)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v 266 (488)
+ .+.. ........+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.||++
T Consensus 157 -v---~~~~---~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i 228 (455)
T 1ebd_A 157 -I---LDST---GALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQMAAIIKKRLKKKGVEV 228 (455)
T ss_dssp -E---ECHH---HHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTTCEE
T ss_pred -E---ecHH---HHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEE
Confidence 2 2222 23332335799999999999999999999999999999999999884 89999999999999999999
Q ss_pred EcCCeEEEEEeCCCCcEEEEEeC---CCcEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCCCCEEEE
Q 011322 267 VKGASIKNLEAGSDGRVAAVKLE---DGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAI 340 (488)
Q Consensus 267 ~~~~~v~~i~~~~~~~v~~v~~~---~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~ 340 (488)
++++++++++.+++ .+ .+.+. +++++++|.||+|+|++|+.++ ++++|+..+ +|+|.||+++||+.|+|||+
T Consensus 229 ~~~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~ 306 (455)
T 1ebd_A 229 VTNALAKGAEERED-GV-TVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAI 306 (455)
T ss_dssp EESEEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEEC
T ss_pred EeCCEEEEEEEeCC-eE-EEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEE
Confidence 99999999985432 22 34543 4568999999999999999887 678888876 57799999999999999999
Q ss_pred ceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeEeccccCCCCcceeeeEeeCCCC------
Q 011322 341 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------ 412 (488)
Q Consensus 341 GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~------ 412 (488)
|||+..+. .+..|..||+.+|.+|++. ..+ |..+|+ ...++.. +..+|....
T Consensus 307 GD~~~~~~----------~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~--~~~~~~~-------~a~vG~~e~~a~~~g 366 (455)
T 1ebd_A 307 GDIVPGPA----------LAHKASYEGKVAAEAIAGH-PSAVDYVAIPA--VVFSDPE-------CASVGYFEQQAKDEG 366 (455)
T ss_dssp GGGSSSCC----------CHHHHHHHHHHHHHHHTSC-CCCCCCSCCCE--EECSSSC-------EEEEECCHHHHHTTT
T ss_pred eccCCCcc----------cHHHHHHHHHHHHHHHcCC-CccCCCCCCCE--EEECCCc-------eEEEeCCHHHHHhcC
Confidence 99997532 3556999999999999974 333 344554 3323221 334454321
Q ss_pred -cEEEE------------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhcCCCCC--hhhhcCCCcHHHH
Q 011322 413 -ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD--KAKLQQASSVEEA 474 (488)
Q Consensus 413 -~~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~--~~~~~~~~~~~~~ 474 (488)
+.... .+....+.+++++ +++|+|+++++..+.++... ..+|+++.+++ ...++.||+++|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~ 446 (455)
T 1ebd_A 367 IDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEI 446 (455)
T ss_dssp CCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHH
T ss_pred CCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHH
Confidence 11110 0112457888876 69999999977777665544 55678888886 2346889999999
Q ss_pred HHHHHccC
Q 011322 475 LEIARAAL 482 (488)
Q Consensus 475 ~~~~~~~~ 482 (488)
++.+++++
T Consensus 447 ~~~~~~~~ 454 (455)
T 1ebd_A 447 AMEAAEVA 454 (455)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998754
No 30
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.1e-42 Score=357.35 Aligned_cols=403 Identities=19% Similarity=0.260 Sum_probs=275.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---C-CccccCCC-----CCCCCCCCCcccccC-
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---L-TKGYLFPL-----DKKPARLPGFHTCVG- 119 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~---l-~~~~~~~~-----~~~~~~~~~~~~~~~- 119 (488)
.++||+|||||+||+++|..|++.|+ +|+|||+++........ . ++.++... ........++.....
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~ 80 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGF---NTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDI 80 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 35799999999999999999999987 89999996543210000 0 00000000 000000000000000
Q ss_pred -CCC--------------CCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--cE------EEeccEEecCCCCCCc
Q 011322 120 -SGG--------------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KL------LKYGSLIVATGCTASR 176 (488)
Q Consensus 120 -~~~--------------~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g--~~------i~yd~lVlAtG~~~~~ 176 (488)
..+ .....+++++.+++++.++.+. .+....+|.+.+| ++ +.||+||+|||+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~ 159 (478)
T 1v59_A 81 KINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF-EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTP 159 (478)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCC
Confidence 000 0001235567899999876554 3433345555666 56 9999999999998743
Q ss_pred CCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHH
Q 011322 177 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256 (488)
Q Consensus 177 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~ 256 (488)
+ ++....+ ..+.+..+ .......+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.
T Consensus 160 ~---~g~~~~~-~~v~~~~~---~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~ 231 (478)
T 1v59_A 160 F---PGIEIDE-EKIVSSTG---ALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKATQ 231 (478)
T ss_dssp C---TTCCCCS-SSEECHHH---HTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-SSCHHHHHHHH
T ss_pred C---CCCCCCC-ceEEcHHH---HHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-ccCHHHHHHHH
Confidence 3 3333333 11223233 222223579999999999999999999999999999999999998 58999999999
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeC-----CCcEEEcCEEEEeecCcCCCh--hhHhcCCccc-CCCEEeCC
Q 011322 257 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-----DGSTIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVDG 328 (488)
Q Consensus 257 ~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~-----~g~~i~~D~vi~a~G~~p~~~--~~~~~gl~~~-~g~i~vd~ 328 (488)
+.+++.||++++++++++++..+++....+.+. +++++++|.||+|+|++|+++ +++++|+..+ +|+|.||+
T Consensus 232 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~ 311 (478)
T 1v59_A 232 KFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDD 311 (478)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCT
T ss_pred HHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECc
Confidence 999999999999999999985212233356655 456899999999999999998 7888999876 67799999
Q ss_pred CCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeEeccccCCCCcceeeeEe
Q 011322 329 QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFF 407 (488)
Q Consensus 329 ~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~ 407 (488)
++||+.|+|||+|||+..+. .+..|..||+.+|.+|++... ..|..+|++|....+ +..+
T Consensus 312 ~~~t~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~---------~a~v 372 (478)
T 1v59_A 312 QFNSKFPHIKVVGDVTFGPM----------LAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPE---------VAWV 372 (478)
T ss_dssp TSBCSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSE---------EEEE
T ss_pred CCccCCCCEEEeeccCCCcc----------cHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCc---------EEEE
Confidence 99999999999999998542 355699999999999997432 246667876543222 3344
Q ss_pred eCCCC-------cEEE-------------EccCCCcEEEEEEE--CCEEEEEEeecCChHH-hhHHHHHHhcCCCCC-hh
Q 011322 408 GDNVG-------ETIE-------------IGNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVD-KA 463 (488)
Q Consensus 408 g~~~~-------~~~~-------------~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-~~~~~~l~~~~~~~~-~~ 463 (488)
|.... ++.. .++ ...+.+++++ +++|+|+++++..+.+ ...+..+|+++.+++ ..
T Consensus 373 G~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~ 451 (478)
T 1v59_A 373 GKTEEQLKEAGIDYKIGKFPFAANSRAKTNQD-TEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVA 451 (478)
T ss_dssp ECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTC-CCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHH
T ss_pred ECCHHHHHHcCCCEEEEEEecccchhhhhcCC-CcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHh
Confidence 43321 1111 011 2346677665 6999999987776655 445566788988875 33
Q ss_pred h-hcCCCcHHHHHHHHHccCCc
Q 011322 464 K-LQQASSVEEALEIARAALPV 484 (488)
Q Consensus 464 ~-~~~~~~~~~~~~~~~~~~~~ 484 (488)
. .+.||+++|++..++.++..
T Consensus 452 ~~~~~~Pt~~e~~~~~~~~~~~ 473 (478)
T 1v59_A 452 RVCHAHPTLSEAFKEANMAAYD 473 (478)
T ss_dssp TSCCCTTCTTHHHHHHHHHHHS
T ss_pred hCCCCCCCHHHHHHHHHHHHhc
Confidence 3 48889999999999876443
No 31
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=6.4e-42 Score=350.04 Aligned_cols=400 Identities=16% Similarity=0.181 Sum_probs=277.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---CC-Ccccc-----------CCCCCCCCCCCCcc
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---AL-TKGYL-----------FPLDKKPARLPGFH 115 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---~l-~~~~~-----------~~~~~~~~~~~~~~ 115 (488)
++||+|||||+||++||..|++.|. +|+|||+++....... .. ++.++ ........++....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~---~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKY---NVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQ 80 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCC---eEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHH
Confidence 5799999999999999999999987 8999997765321100 00 00000 00000000000000
Q ss_pred cccCC--CCC--CCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcE--EEeccEEecCCCCCCcCCCCcCCCCCcEE
Q 011322 116 TCVGS--GGE--RQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL--LKYGSLIVATGCTASRFPEKIGGYLPGVH 189 (488)
Q Consensus 116 ~~~~~--~~~--~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~--i~yd~lVlAtG~~~~~~~~~~g~~~~~v~ 189 (488)
..... ... .....++++.+++++.+ ++..+++....|.+.+|++ +.||+||||||+.|. .|+++|.+ +
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~--~-- 154 (466)
T 3l8k_A 81 DRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETA-KLRLPGVE--Y-- 154 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEEC-CCCCTTGG--G--
T ss_pred HHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCcc-CCCCCCcc--c--
Confidence 00000 000 01122334568999876 7888998877888888888 999999999999876 45555532 2
Q ss_pred EecCHHHHHHHH-HhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEc
Q 011322 190 YIRDVADADALI-SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 268 (488)
Q Consensus 190 ~~~~~~~~~~~~-~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~ 268 (488)
+.+..+...+. .....+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.++ |++++
T Consensus 155 -~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~ 230 (466)
T 3l8k_A 155 -CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKF 230 (466)
T ss_dssp -SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEEC
T ss_pred -eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEE
Confidence 33333332111 22235789999999999999999999999999999999999986449999998888776 99999
Q ss_pred CCeEEEEEeCCCCcEEEEEeC--CCc--EEEcCEEEEeecCcCCChh-hHhcCCcccCCCEEeCCCCCCCCCCEEEEcee
Q 011322 269 GASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPTVSP-FERVGLNSSVGGIQVDGQFRTRMPGIFAIGDV 343 (488)
Q Consensus 269 ~~~v~~i~~~~~~~v~~v~~~--~g~--~i~~D~vi~a~G~~p~~~~-~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~ 343 (488)
++++++++..+++.+ .+.++ +|+ ++++|.|++|+|++|++++ +++.|+..++++|.||+++||++|||||+|||
T Consensus 231 ~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~Gi~vd~~~~t~~~~Iya~GD~ 309 (466)
T 3l8k_A 231 NSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTGIVVDETMKTNIPNVFATGDA 309 (466)
T ss_dssp SCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSSBCCCTTCBCSSTTEEECGGG
T ss_pred CCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCCEeECCCccCCCCCEEEEEec
Confidence 999999986432444 46776 676 7999999999999999885 78889987643499999999999999999999
Q ss_pred cccCCccCCcccccccHHHHHHHHHHHHHHHhcC--CCC--CCCCCCceeEeccccCCCCcceeeeEeeCCCCc------
Q 011322 344 AAFPLKMYDRTARVEHVDHARQSAQHCIKALLSA--QTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------ 413 (488)
Q Consensus 344 a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~--~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~------ 413 (488)
+..+. .+..|..||+.+|.||++. ... .+..+|+ . .|..+ .+..+|....+
T Consensus 310 ~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~--~-~~~~~------~~a~vG~te~~a~~~g~ 370 (466)
T 3l8k_A 310 NGLAP----------YYHAAVRMSIAAANNIMANGMPVDYVDVKSIPV--T-IYTIP------SLSYVGILPSKARKMGI 370 (466)
T ss_dssp TCSCC----------SHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCE--E-ECSSS------CEEEEECCHHHHHHHTC
T ss_pred CCCCc----------cHhHHHHHHHHHHHHHhCCCCCccccCCCCCcE--E-EECCC------CeEEecCCHHHHHhCCC
Confidence 98632 4567999999999999975 332 3444554 2 33221 14455544321
Q ss_pred -EE--EEc----------cCCCcEEEEEEE--CCEEEEEEeecCChHHhhHHH-HHHhcCCCCC-h-hhhcCCCcHHHHH
Q 011322 414 -TI--EIG----------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLLP-TLARSQPFVD-K-AKLQQASSVEEAL 475 (488)
Q Consensus 414 -~~--~~~----------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~-~l~~~~~~~~-~-~~~~~~~~~~~~~ 475 (488)
.. ... +....+.++.++ +++|+|+++++.++.++.... .+|+.+.+++ . ..++.|||++|++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~ 450 (466)
T 3l8k_A 371 EIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEII 450 (466)
T ss_dssp CEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHH
T ss_pred CEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHHH
Confidence 11 100 112457777775 499999999888887766554 4578888886 2 3458899999999
Q ss_pred HHHHccCC
Q 011322 476 EIARAALP 483 (488)
Q Consensus 476 ~~~~~~~~ 483 (488)
..+++++.
T Consensus 451 ~~~~~~~~ 458 (466)
T 3l8k_A 451 SYTARKVI 458 (466)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987653
No 32
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.5e-42 Score=353.60 Aligned_cols=404 Identities=18% Similarity=0.286 Sum_probs=275.7
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------CC----------------CCccccCCCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------PA----------------LTKGYLFPLD 105 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~------~~----------------l~~~~~~~~~ 105 (488)
+|+++||+|||||+||++||..|++.|. +|+|||+++...... |. +.. +-....
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~-~g~~~~ 97 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGM---KVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEA-LGVEVA 97 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGG-GTEECC
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhh-cCcccC
Confidence 3456899999999999999999999987 899999876432100 00 000 000000
Q ss_pred CCCCCCCCcccc---cCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--cEEEeccEEecCCCCCCcCCCC
Q 011322 106 KKPARLPGFHTC---VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEK 180 (488)
Q Consensus 106 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g--~~i~yd~lVlAtG~~~~~~~~~ 180 (488)
....++...... ...........++++.+++++.+ .+..+++....|.+.+| .++.||+||||||+.|.. +
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~---i 173 (491)
T 3urh_A 98 NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQG-TGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAG---I 173 (491)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCC---B
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCC---C
Confidence 000000000000 00000001123456679999886 45556665566776677 579999999999987643 3
Q ss_pred cCCC--CCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHH
Q 011322 181 IGGY--LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQL 258 (488)
Q Consensus 181 ~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~ 258 (488)
++.. .++...+ +..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.
T Consensus 174 pg~~~~~~~~~~~----~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~ 248 (491)
T 3urh_A 174 PGVEVAFDEKTIV----SSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQRM 248 (491)
T ss_dssp TTBCCCCCSSSEE----CHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHHHH
T ss_pred CCcccccCCeeEE----ehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHHHH
Confidence 3322 2222222 23333333456899999999999999999999999999999999999985 899999999999
Q ss_pred HHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC---C--cEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCC
Q 011322 259 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQF 330 (488)
Q Consensus 259 l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~ 330 (488)
+++.||++++++++++++..+++ + .+.+.+ | +++++|.||+|+|++|+.++ ++..++..+ +|+|.||+++
T Consensus 249 l~~~gV~v~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 326 (491)
T 3urh_A 249 LTKQGIDFKLGAKVTGAVKSGDG-A-KVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHF 326 (491)
T ss_dssp HHHTTCEEECSEEEEEEEEETTE-E-EEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTC
T ss_pred HHhCCCEEEECCeEEEEEEeCCE-E-EEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCC
Confidence 99999999999999999865332 2 355542 4 57999999999999999986 788888876 6779999999
Q ss_pred CCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC-CCCCCCceeEeccccCCCCcceeeeEeeC
Q 011322 331 RTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH-TYDYLPYFYSRVFEYEGSPRKVWWQFFGD 409 (488)
Q Consensus 331 ~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~-~~~~~p~~~~~~~~~~g~~~~~~~~~~g~ 409 (488)
+|+.|+|||+|||+..+. .+..|..||+.+|.+|++.... .+..+|+ .. |..+ .+..+|.
T Consensus 327 ~t~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~-~~~p------~~a~vGl 387 (491)
T 3urh_A 327 QTSIAGVYAIGDVVRGPM----------LAHKAEDEGVAVAEIIAGQAGHVNYDVIPG--VV-YTQP------EVASVGK 387 (491)
T ss_dssp BCSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHTTSCCCCCTTCCCE--EE-CSSS------CEEEEEC
T ss_pred CCCCCCEEEEEecCCCcc----------chhHHHHHHHHHHHHHcCCCcccCCCCCCE--EE-EccC------CeEEEeC
Confidence 999999999999996542 4567999999999999974322 2444564 22 3221 1444554
Q ss_pred CCCc------EEEEcc-------------CCCcEEEEEEE--CCEEEEEEeecCChHHhhHHHH-HHhcCCCCC-h-hhh
Q 011322 410 NVGE------TIEIGN-------------FDPKIATFWID--SGKLKGVLVESGSPEEFQLLPT-LARSQPFVD-K-AKL 465 (488)
Q Consensus 410 ~~~~------~~~~~~-------------~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~~~-~-~~~ 465 (488)
...+ -+..+. ....+.++.++ +++|+|+++++.++.++..... +|+.+.+++ . ..+
T Consensus 388 te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~ 467 (491)
T 3urh_A 388 TEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTC 467 (491)
T ss_dssp CHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC
T ss_pred CHHHHHhCCCCEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCc
Confidence 3211 011110 12357777665 5899999998888887776655 578888876 3 334
Q ss_pred cCCCcHHHHHHHHHccCCcc
Q 011322 466 QQASSVEEALEIARAALPVE 485 (488)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~ 485 (488)
+.|||++|+++.++.++..+
T Consensus 468 ~~hPt~~e~~~~~~~~~~~~ 487 (491)
T 3urh_A 468 HAHPTMSEAVKEAALSTFFK 487 (491)
T ss_dssp CCSSCTTHHHHHHHHHHHC-
T ss_pred cCCCChHHHHHHHHHHhhhc
Confidence 88999999999998876543
No 33
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=4.9e-41 Score=343.17 Aligned_cols=395 Identities=20% Similarity=0.252 Sum_probs=273.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-Ccccc--------------CCC-CCCCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TKGYL--------------FPL-DKKPARL 111 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~---~~~l-~~~~~--------------~~~-~~~~~~~ 111 (488)
++||+|||||+||++||..|++.|. +|+|||+++. ... .... ++.++ +.. .....++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~---~V~lie~~~~-GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGL---KVLAVEAGEV-GGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDL 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT-THHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCCC-CCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCH
Confidence 5899999999999999999999987 8999999862 100 0000 00000 000 0000000
Q ss_pred CCcccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcE
Q 011322 112 PGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGV 188 (488)
Q Consensus 112 ~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v 188 (488)
..+..... .........++++.+++++.++ +..++ .+++.+. |+++.||+||||||+.|..++.+++. ..+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~~--~~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~--~~v 155 (464)
T 2eq6_A 82 KKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGF-ARLVG--PKEVEVG-GERYGAKSLILATGSEPLELKGFPFG--EDV 155 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEE--TTEEEET-TEEEEEEEEEECCCEEECCBTTBCCS--SSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee-EEEcc--CCEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCC--CcE
Confidence 00000000 0000001235567899999875 44465 3677776 67899999999999988744323331 122
Q ss_pred EEecCHHHHHHHHHhhh-cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEE
Q 011322 189 HYIRDVADADALISSLE-KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFV 267 (488)
Q Consensus 189 ~~~~~~~~~~~~~~~~~-~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~ 267 (488)
. +.. ...+... .+++++|||+|.+|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||+++
T Consensus 156 ~---~~~---~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gV~i~ 228 (464)
T 2eq6_A 156 W---DST---RALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-QGDPETAALLRRALEKEGIRVR 228 (464)
T ss_dssp E---CHH---HHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCEEE
T ss_pred E---cHH---HHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHhcCCEEE
Confidence 2 223 3323223 579999999999999999999999999999999999988 4799999999999999999999
Q ss_pred cCCeEEEEEeCCCCcEEEEEeC-C--Cc--EEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCCCCEEE
Q 011322 268 KGASIKNLEAGSDGRVAAVKLE-D--GS--TIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFA 339 (488)
Q Consensus 268 ~~~~v~~i~~~~~~~v~~v~~~-~--g~--~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya 339 (488)
+++++++++.++ +.+ .+.+. + |+ ++++|.||+|+|++|+.++ ++..|+..+ +|+|.||+++||+.|+|||
T Consensus 229 ~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya 306 (464)
T 2eq6_A 229 TKTKAVGYEKKK-DGL-HVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYA 306 (464)
T ss_dssp CSEEEEEEEEET-TEE-EEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred cCCEEEEEEEeC-CEE-EEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEE
Confidence 999999998543 333 46665 6 76 8999999999999999886 678888875 6779999999999999999
Q ss_pred EceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeEeccccCCCCcceeeeEeeCCCC------
Q 011322 340 IGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------ 412 (488)
Q Consensus 340 ~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~------ 412 (488)
+|||+..+. .+..|..||+.+|.+|++... ..+. +|++ ..++. .+..+|....
T Consensus 307 ~GD~~~~~~----------l~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~--~~~~~-------~~a~vG~~e~~a~~~g 366 (464)
T 2eq6_A 307 IGDAARPPL----------LAHKAMREGLIAAENAAGKDSAFDYQ-VPSV--VYTSP-------EWAGVGLTEEEAKRAG 366 (464)
T ss_dssp CGGGTCSSC----------CHHHHHHHHHHHHHHHTTCCCCCCCC-CCEE--ECSSS-------EEEEEECCHHHHHHTT
T ss_pred EeccCCCcc----------cHHHHHHHHHHHHHHhcCCCcccCCC-CCeE--EECCC-------CEEEEeCCHHHHHhcC
Confidence 999997532 455699999999999997432 1344 5642 22221 1344554321
Q ss_pred -cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhh-HHHHHHhcCCCCC--hhhhcCCCcHHHH
Q 011322 413 -ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD--KAKLQQASSVEEA 474 (488)
Q Consensus 413 -~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~l~~~~~~~~--~~~~~~~~~~~~~ 474 (488)
+... . .+....+.+++++ +|+|+|+++++..+.++. .+..+|+.+.+++ ...++.||+++|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~ 446 (464)
T 2eq6_A 367 YKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSES 446 (464)
T ss_dssp CCEEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHH
T ss_pred CCEEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHH
Confidence 1111 0 0112457788776 699999999888776654 4456688888886 2345889999999
Q ss_pred HHHHHccCCc
Q 011322 475 LEIARAALPV 484 (488)
Q Consensus 475 ~~~~~~~~~~ 484 (488)
+..+++++..
T Consensus 447 ~~~~~~~~~~ 456 (464)
T 2eq6_A 447 LMEAAEAFHK 456 (464)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 9999876554
No 34
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=2.5e-41 Score=343.91 Aligned_cols=390 Identities=18% Similarity=0.241 Sum_probs=270.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------CC---------------CCccccCCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------PA---------------LTKGYLFPLDKKP 108 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~------~~---------------l~~~~~~~~~~~~ 108 (488)
+++||+|||||+||+++|..|++.|. +|+|||++.. .... |. ....+-.......
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~-GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~ 78 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQ---KCALIEAKEL-GGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINK 78 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC---eEEEEcCCCC-CCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCc
Confidence 35799999999999999999999876 8999999742 1000 00 0000000000000
Q ss_pred CCCCCcccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC
Q 011322 109 ARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (488)
Q Consensus 109 ~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~ 185 (488)
.++..+..... ..........+++.+++++.+ ++..++. ++|.+ +++++.||+||||||+.|. .|+++|.
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~-~p~i~g~-- 151 (450)
T 1ges_A 79 FNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKG-FARFVDA--KTLEV-NGETITADHILIATGGRPS-HPDIPGV-- 151 (450)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CCEEEET--TEEEE-TTEEEEEEEEEECCCEEEC-CCCSTTG--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecC--CEEEE-CCEEEEeCEEEECCCCCCC-CCCCCCc--
Confidence 00000000000 000000112346679999987 4566764 57777 7778999999999999876 4544442
Q ss_pred CcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcE
Q 011322 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265 (488)
Q Consensus 186 ~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~ 265 (488)
+ ...+ .+.+......+++++|||+|.+|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.+.+++.||+
T Consensus 152 ~---~~~~---~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~ 224 (450)
T 1ges_A 152 E---YGID---SDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-SFDPMISETLVEVMNAEGPQ 224 (450)
T ss_dssp G---GSBC---HHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHSCE
T ss_pred c---ceec---HHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-hhhHHHHHHHHHHHHHCCCE
Confidence 1 1222 333333334579999999999999999999999999999999999887 48999999999999999999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh-h-hHhcCCccc-CCCEEeCCCCCCCCCCEEEEce
Q 011322 266 FVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGD 342 (488)
Q Consensus 266 v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~-~-~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD 342 (488)
+++++++++++.++++.+ .+.+++|+++++|.||+|+|++|+++ + ++++|+..+ +|+|.||++++|+.|+|||+||
T Consensus 225 i~~~~~v~~i~~~~~~~~-~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD 303 (450)
T 1ges_A 225 LHTNAIPKAVVKNTDGSL-TLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGD 303 (450)
T ss_dssp EECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSG
T ss_pred EEeCCEEEEEEEeCCcEE-EEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEec
Confidence 999999999986543433 67888999999999999999999987 3 688898876 6779999999999999999999
Q ss_pred ecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC---CCCCCCCceeEeccccCCCCcceeeeEeeCCCC-------
Q 011322 343 VAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT---HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------- 412 (488)
Q Consensus 343 ~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~---~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~------- 412 (488)
|+..+. .+..|..||+.+|.||++... ..|..+|+. .|..+ .+..+|....
T Consensus 304 ~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~---~~~~~------~~a~vG~~e~~a~~~~g 364 (450)
T 1ges_A 304 NTGAVE----------LTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTV---VFSHP------PIGTVGLTEPQAREQYG 364 (450)
T ss_dssp GGTSCC----------CHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEE---ECCSS------CEEEEECCHHHHHHHHC
T ss_pred cCCCCc----------cHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeE---EECCC------ceEEEeCCHHHHHhcCC
Confidence 987432 466799999999999997432 234556642 22211 1334443211
Q ss_pred --cEEEE------------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHHHH-HHhcCCCCC-h-hhhcCCCcHHH
Q 011322 413 --ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLLPT-LARSQPFVD-K-AKLQQASSVEE 473 (488)
Q Consensus 413 --~~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~~~-~-~~~~~~~~~~~ 473 (488)
..... ......+.++.++ +++|+|+++++.++.++..... +++.+.+++ . ..++.|||++|
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 444 (450)
T 1ges_A 365 DDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAE 444 (450)
T ss_dssp GGGEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGG
T ss_pred CCcEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHH
Confidence 11110 1112346777765 6999999998777877776655 468888776 2 33688999999
Q ss_pred HHHH
Q 011322 474 ALEI 477 (488)
Q Consensus 474 ~~~~ 477 (488)
++..
T Consensus 445 ~~~~ 448 (450)
T 1ges_A 445 EFVT 448 (450)
T ss_dssp GGGS
T ss_pred HHHh
Confidence 8764
No 35
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.7e-41 Score=348.82 Aligned_cols=317 Identities=20% Similarity=0.302 Sum_probs=239.4
Q ss_pred HHHC-CcEEEeCCcEEEEeCCCcEEEeC---C-----CcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHH
Q 011322 130 YKEK-GIEMIYQDPVTSIDIEKQTLITN---S-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL 200 (488)
Q Consensus 130 ~~~~-~v~~~~~~~v~~id~~~~~v~~~---~-----g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 200 (488)
+++. +++++.+ ++..++. ++|.+. + ++++.||+||||||+.|. .|+++|. +.+.+ ++.+
T Consensus 117 l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~~~~~~~~~~d~lViATGs~p~-~p~i~G~--~~~~~------~~~~ 184 (495)
T 2wpf_A 117 FNDTEGLDFFLG-WGSLESK--NVVVVRETADPKSAVKERLQADHILLATGSWPQ-MPAIPGI--EHCIS------SNEA 184 (495)
T ss_dssp HHHCTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEECCCEEEC-CCCCTTG--GGCEE------HHHH
T ss_pred HhcCCCeEEEEe-EEEEeeC--CEEEEeecCCccCCCCeEEEcCEEEEeCCCCcC-CCCCCCc--ccccc------HHHH
Confidence 4566 9999986 5766764 677775 4 677999999999999886 3544543 22222 3333
Q ss_pred HHhhhcCCeEEEECCcHHHHHHHHHHHhC---CCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEe
Q 011322 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 277 (488)
Q Consensus 201 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~---g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 277 (488)
......+++++|||+|.+|+|+|..|.++ |.+|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++.
T Consensus 185 ~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 263 (495)
T 2wpf_A 185 FYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-FDETIREEVTKQLTANGIEIMTNENPAKVSL 263 (495)
T ss_dssp TTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-SCHHHHHHHHHHHHHTTCEEEESCCEEEEEE
T ss_pred HhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 33334578999999999999999999999 9999999999999974 8999999999999999999999999999986
Q ss_pred CCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcc
Q 011322 278 GSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 354 (488)
Q Consensus 278 ~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~ 354 (488)
++++. ..+.+++|+++++|.||+|+|++|++++ ++++|+..+ +|+|.||+++||+.|+|||+|||+..+
T Consensus 264 ~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~------- 335 (495)
T 2wpf_A 264 NTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRL------- 335 (495)
T ss_dssp CTTSC-EEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBCSSTTEEECGGGGCSC-------
T ss_pred cCCce-EEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc-------
Confidence 53333 3678889999999999999999999974 678899876 678999999999999999999999642
Q ss_pred cccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeEeccccCCCCcceeeeEeeCCCCc-------EEE-E-------
Q 011322 355 ARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-I------- 417 (488)
Q Consensus 355 ~~~~~~~~A~~~g~~~a~~i~~~~~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~~-~------- 417 (488)
..+..|..||+.+|.+|++... ..|..+|+ . .|..+ .+..+|....+ ... .
T Consensus 336 ---~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~-~~~~~------~~a~vGl~e~~a~~~~~~~~v~~~~~~~~~ 403 (495)
T 2wpf_A 336 ---MLTPVAINEGAALVDTVFGNKPRKTDHTRVAS--A-VFSIP------PIGTCGLIEEVAAKEFEKVAVYMSSFTPLM 403 (495)
T ss_dssp ---CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEE--E-ECCSS------CEEEEECCHHHHHHHSSEEEEEEEEECCTH
T ss_pred ---cCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCE--E-EECCC------CeEEEeCCHHHHHhcCCCEEEEEEecCchh
Confidence 2566799999999999997433 23444553 2 23221 14455543211 111 1
Q ss_pred ----ccCCCcE-EEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhcCCCCC--hhhhcCCCcHHHHHHHHH
Q 011322 418 ----GNFDPKI-ATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD--KAKLQQASSVEEALEIAR 479 (488)
Q Consensus 418 ----~~~~~~~-~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~ 479 (488)
+.....+ .++.++ +++|+|+++++.++.++... ..+++.+.+++ ...++.||+++|++..++
T Consensus 404 ~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (495)
T 2wpf_A 404 HNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMR 475 (495)
T ss_dssp HHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCC
T ss_pred hhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHH
Confidence 1112457 788775 68999999988877776655 44578888876 233688999999988765
No 36
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.4e-42 Score=356.01 Aligned_cols=401 Identities=17% Similarity=0.237 Sum_probs=263.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CC---CC--C------------CccccCCCCCCCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ER---PA--L------------TKGYLFPLDKKPARL 111 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~---~~--l------------~~~~~~~~~~~~~~~ 111 (488)
++||+|||||+||++||..|++.|. +|+|||+++...- .+ |. + ...+-.... ...++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~ 77 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNA---KVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK-FSFNL 77 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC-CCCCH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC-CccCH
Confidence 4799999999999999999999887 8999999852100 00 00 0 000000000 00000
Q ss_pred CCcccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCC-------------CcEEEeccEEecCCCCCC
Q 011322 112 PGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-------------GKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 112 ~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~-------------g~~i~yd~lVlAtG~~~~ 175 (488)
+.+..... .........++++.+++++.++ +..++. +++++.+ ++++.||+||||||+.|.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~ 154 (500)
T 1onf_A 78 PLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPV 154 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CCCC----------------------------CBSSEEECCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCC
Confidence 00000000 0000001234467799999874 444543 4555543 567999999999999886
Q ss_pred cCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHH
Q 011322 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRY 255 (488)
Q Consensus 176 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~ 255 (488)
.|+++|. +.+.+ ++.+..... +++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+
T Consensus 155 -~p~i~G~--~~~~~------~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l 223 (500)
T 1onf_A 155 -FPPVKGI--ENTIS------SDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-KFDESVINVL 223 (500)
T ss_dssp -CCSCTTG--GGCEE------HHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-TSCHHHHHHH
T ss_pred -CCCCCCC--CcccC------HHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-ccchhhHHHH
Confidence 4554543 22222 223322222 79999999999999999999999999999999999997 4899999999
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcE-EEcCEEEEeecCcCCCh-h-hHhcCCcccCCCEEeCCCCCC
Q 011322 256 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST-IDADTIVIGIGAKPTVS-P-FERVGLNSSVGGIQVDGQFRT 332 (488)
Q Consensus 256 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~-i~~D~vi~a~G~~p~~~-~-~~~~gl~~~~g~i~vd~~~~t 332 (488)
.+.+++.||++++++++++++..+++. ..+.+++|++ +++|.||+|+|++|+++ + ++++|+..++|+|.||+++||
T Consensus 224 ~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~~~t 302 (500)
T 1onf_A 224 ENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDENQRT 302 (500)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTTCBC
T ss_pred HHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCCccc
Confidence 999999999999999999998654343 3678889988 99999999999999986 4 688888887778999999999
Q ss_pred CCCCEEEEceecccCCcc-----------------------CC-cccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCC
Q 011322 333 RMPGIFAIGDVAAFPLKM-----------------------YD-RTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLP 386 (488)
Q Consensus 333 ~~~~Iya~GD~a~~~~~~-----------------------~~-~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p 386 (488)
+.|+|||+|||+..+... .+ .......+..|..||+.+|.||++.... .|..+|
T Consensus 303 ~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p 382 (500)
T 1onf_A 303 SVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIP 382 (500)
T ss_dssp SSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCC
T ss_pred CCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCC
Confidence 999999999999532100 00 0012457888999999999999974432 355566
Q ss_pred ceeEeccccCCCCcceeeeEeeCCCC---------cEEE----------------EccCCCcEEEEEEE--CCEEEEEEe
Q 011322 387 YFYSRVFEYEGSPRKVWWQFFGDNVG---------ETIE----------------IGNFDPKIATFWID--SGKLKGVLV 439 (488)
Q Consensus 387 ~~~~~~~~~~g~~~~~~~~~~g~~~~---------~~~~----------------~~~~~~~~~~~~~~--~~~~~g~~~ 439 (488)
+. .|..+ .+..+|.... .+.. .......+.++.++ +++|+|+++
T Consensus 383 ~~---~~~~~------~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~ 453 (500)
T 1onf_A 383 TV---IFSHP------PIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHI 453 (500)
T ss_dssp EE---ECCSS------CEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEE
T ss_pred eE---EEcCc------ceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEE
Confidence 42 22211 0333443210 1110 01112447777774 589999999
Q ss_pred ecCChHHhhHHHH-HHhcCCCCC-h-hhhcCCCcHHHHHHHHH
Q 011322 440 ESGSPEEFQLLPT-LARSQPFVD-K-AKLQQASSVEEALEIAR 479 (488)
Q Consensus 440 ~~~~~~~~~~~~~-l~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 479 (488)
++.++.++..... +++.+.+++ . ..++.||+++|++..++
T Consensus 454 ~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~ 496 (500)
T 1onf_A 454 IGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFLTLQ 496 (500)
T ss_dssp ESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTTHHHHCC
T ss_pred ECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHhc
Confidence 7777777666644 578888776 2 33688999999998764
No 37
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.5e-42 Score=356.32 Aligned_cols=317 Identities=18% Similarity=0.245 Sum_probs=239.8
Q ss_pred HHHC-CcEEEeCCcEEEEeCCCcEEEeC-----CC---cEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHH
Q 011322 130 YKEK-GIEMIYQDPVTSIDIEKQTLITN-----SG---KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL 200 (488)
Q Consensus 130 ~~~~-~v~~~~~~~v~~id~~~~~v~~~-----~g---~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 200 (488)
+++. +++++.+ .+..++. +++.+. +| +++.||+||||||+.|. .|+++|. +. +.+ .+.+
T Consensus 113 l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~p~-~p~i~g~--~~---~~~---~~~~ 180 (490)
T 1fec_A 113 FADTEGLTFHQG-FGALQDN--HTVLVRESADPNSAVLETLDTEYILLATGSWPQ-HLGIEGD--DL---CIT---SNEA 180 (490)
T ss_dssp HHTSTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEECCCEEEC-CCCSBTG--GG---CBC---HHHH
T ss_pred HhcCCCcEEEEe-EEEEeeC--CEEEEEeeccCCCCceEEEEcCEEEEeCCCCCC-CCCCCCc--cc---eec---HHHH
Confidence 4566 9999986 5777775 456553 66 67999999999999886 4544443 12 222 3333
Q ss_pred HHhhhcCCeEEEECCcHHHHHHHHHHHhC---CCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEe
Q 011322 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 277 (488)
Q Consensus 201 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~---g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 277 (488)
......+++++|||+|++|+|+|..|.++ |.+|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++.
T Consensus 181 ~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 259 (490)
T 1fec_A 181 FYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-FDSELRKQLTEQLRANGINVRTHENPAKVTK 259 (490)
T ss_dssp TTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTTEEEEETCCEEEEEE
T ss_pred hhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 33334578999999999999999999999 9999999999999974 8999999999999999999999999999986
Q ss_pred CCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh-h-hHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcc
Q 011322 278 GSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 354 (488)
Q Consensus 278 ~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~-~-~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~ 354 (488)
++++. ..+.+++|+++++|.||+|+|++|+++ + ++++|+..+ +|+|.||+++||+.|+|||+|||+..+
T Consensus 260 ~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~------- 331 (490)
T 1fec_A 260 NADGT-RHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRV------- 331 (490)
T ss_dssp CTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGGCSC-------
T ss_pred cCCCE-EEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc-------
Confidence 54333 367888998999999999999999987 4 688899876 678999999999999999999999642
Q ss_pred cccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeEeccccCCCCcceeeeEeeCCCCc-------EEE-E-------
Q 011322 355 ARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-I------- 417 (488)
Q Consensus 355 ~~~~~~~~A~~~g~~~a~~i~~~~~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~~-~------- 417 (488)
..+..|..||+.+|.+|++... ..|..+|+ ...++.+ +..+|....+ ... .
T Consensus 332 ---~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~~~-------~a~vG~~e~~a~~~~~~~~~~~~~~~~~~ 399 (490)
T 1fec_A 332 ---MLTPVAINEGAAFVDTVFANKPRATDHTKVAC--AVFSIPP-------MGVCGYVEEDAAKKYDQVAVYESSFTPLM 399 (490)
T ss_dssp ---CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCE--EECCSSC-------EEEEECCHHHHHHHCSEEEEEEEEECCHH
T ss_pred ---cCHHHHHHHHHHHHHHhcCCCCCcCCCCCccE--EEECCCC-------eEEEeCCHHHHHhcCCCEEEEEeecChhh
Confidence 2566799999999999997433 23445553 2222221 4455644211 111 1
Q ss_pred ----ccCCCcEE-EEEEE--CCEEEEEEeecCChHHhhHH-HHHHhcCCCCC-h-hhhcCCCcHHHHHHHHH
Q 011322 418 ----GNFDPKIA-TFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEALEIAR 479 (488)
Q Consensus 418 ----~~~~~~~~-~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 479 (488)
+.....+. +++++ +++|+|+++++.++.++... ..+|+.+.+++ . ..++.||+++|++..++
T Consensus 400 ~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 471 (490)
T 1fec_A 400 HNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMR 471 (490)
T ss_dssp HHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCC
T ss_pred hhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHHH
Confidence 11234577 88776 69999999988877776655 44578888876 2 33688999999998765
No 38
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=4.5e-40 Score=337.63 Aligned_cols=402 Identities=18% Similarity=0.237 Sum_probs=279.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCcc----------------------------cc
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKG----------------------------YL 101 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~----------------------------~~ 101 (488)
+++||+|||||+||++||..|++.|+ +|+|||+++..... ..+... +-
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~gG~-~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g 77 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGL---KTALIEKYKGKEGK-TALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHG 77 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTC---CEEEEECCBCTTSS-BCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---EEEEEeCCCccCCC-CCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999987 89999998632110 000000 00
Q ss_pred CCCCCCCCCCCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--cEEEeccEEecCCCCCCc
Q 011322 102 FPLDKKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASR 176 (488)
Q Consensus 102 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g--~~i~yd~lVlAtG~~~~~ 176 (488)
........++....... ..........++++.+++++.+ .+..++.....+...+| ..+.||+||||||+.|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 156 (476)
T 3lad_A 78 ISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEG-HGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVE 156 (476)
T ss_dssp EECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-EEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECC
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCC
Confidence 00000000000000000 0000000113445678999986 55557776677777777 579999999999998764
Q ss_pred CCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHH
Q 011322 177 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256 (488)
Q Consensus 177 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~ 256 (488)
+|. ++.+.+.+.+ +..+......+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.
T Consensus 157 ~~~-~~~~~~~v~~------~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~ 228 (476)
T 3lad_A 157 IPP-APVDQDVIVD------STGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-AVDEQVAKEAQ 228 (476)
T ss_dssp CTT-SCCCSSSEEE------HHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-TSCHHHHHHHH
T ss_pred CCC-CCCCcccEEe------chhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-ccCHHHHHHHH
Confidence 332 3323334443 333333334679999999999999999999999999999999999998 48999999999
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCC---cEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCC
Q 011322 257 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG---STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQF 330 (488)
Q Consensus 257 ~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g---~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~ 330 (488)
+.+++.||++++++++++++..++ .+ .+.+.++ +++++|.||+|+|++|++++ ++..++..+ +|+|.||+++
T Consensus 229 ~~l~~~Gv~v~~~~~v~~i~~~~~-~~-~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~ 306 (476)
T 3lad_A 229 KILTKQGLKILLGARVTGTEVKNK-QV-TVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYC 306 (476)
T ss_dssp HHHHHTTEEEEETCEEEEEEECSS-CE-EEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTS
T ss_pred HHHHhCCCEEEECCEEEEEEEcCC-EE-EEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCc
Confidence 999999999999999999986533 33 4566554 67999999999999999874 677888876 5779999999
Q ss_pred CCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeEeccccCCCCcceeeeEeeC
Q 011322 331 RTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGD 409 (488)
Q Consensus 331 ~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~ 409 (488)
+|+.|||||+|||+..+. .+..|..||+.+|++|++... ..+..+|+. . |..+ .+..+|.
T Consensus 307 ~t~~~~Iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~--~-~~~~------~~a~vGl 367 (476)
T 3lad_A 307 ATSVPGVYAIGDVVRGAM----------LAHKASEEGVVVAERIAGHKAQMNYDLIPAV--I-YTHP------EIAGVGK 367 (476)
T ss_dssp BCSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHHHCCCCCCTTCCCEE--E-CSSS------EEEEEEC
T ss_pred ccCCCCEEEEEccCCCcc----------cHHHHHHHHHHHHHHhcCCCcccCCCCCCEE--E-ECcC------CEEEeeC
Confidence 999999999999996443 456699999999999997532 234455642 2 3221 1344554
Q ss_pred CCCc------EEEEcc-------------CCCcEEEEEEE--CCEEEEEEeecCChHHhhHHHH-HHhcCCCCC-h-hhh
Q 011322 410 NVGE------TIEIGN-------------FDPKIATFWID--SGKLKGVLVESGSPEEFQLLPT-LARSQPFVD-K-AKL 465 (488)
Q Consensus 410 ~~~~------~~~~~~-------------~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~~~-~-~~~ 465 (488)
...+ -+..+. ....+.++.++ +++|+|+++++.++.++..... +|+.+.+++ . ..+
T Consensus 368 te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~ 447 (476)
T 3lad_A 368 TEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMV 447 (476)
T ss_dssp CHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSC
T ss_pred CHHHHHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCc
Confidence 4311 011111 12356777664 5899999998888887776654 578888876 2 335
Q ss_pred cCCCcHHHHHHHHHccCCcc
Q 011322 466 QQASSVEEALEIARAALPVE 485 (488)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~ 485 (488)
+.|||++|+++.++.++..+
T Consensus 448 ~~hPt~~e~~~~~~~~~~~~ 467 (476)
T 3lad_A 448 FAHPALSEALHEAALAVSGH 467 (476)
T ss_dssp CCSSCSHHHHHHHHHHHTTC
T ss_pred cCCCChHHHHHHHHHHHhcc
Confidence 88999999999998876543
No 39
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=3.8e-41 Score=343.71 Aligned_cols=391 Identities=18% Similarity=0.280 Sum_probs=271.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------CC--C------------CccccCCCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------PA--L------------TKGYLFPLDKKPA 109 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~------~~--l------------~~~~~~~~~~~~~ 109 (488)
+++||+|||||+||+++|.+|++.|. +|+|||++.. .... |. + ...+-+.......
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~-GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~ 78 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGK---RVALIESKAL-GGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTL 78 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---C
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCC---cEEEEcCCCC-CCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCc
Confidence 46899999999999999999999877 8999999742 1000 00 0 0000000000000
Q ss_pred CCCCcccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCC
Q 011322 110 RLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLP 186 (488)
Q Consensus 110 ~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~ 186 (488)
++..+..... ..........+++.+++++.+ ++..++. ++|.+ +|+++.||+||||||+.|. .|+++|. +
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~-~p~i~G~--~ 151 (463)
T 2r9z_A 79 DWPRLVAGRDRYIGAINSFWDGYVERLGITRVDG-HARFVDA--HTIEV-EGQRLSADHIVIATGGRPI-VPRLPGA--E 151 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET--TEEEE-TTEEEEEEEEEECCCEEEC-CCSCTTG--G
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEe-EEEEccC--CEEEE-CCEEEEcCEEEECCCCCCC-CCCCCCc--c
Confidence 0000000000 000000122346679999986 5666664 57777 6778999999999999876 3544442 1
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEE
Q 011322 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 266 (488)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v 266 (488)
...+ .+.+......+++++|||+|.+|+|+|..|.++|.+|+++++.+++++. +++++.+.+.+.+++.||++
T Consensus 152 ---~~~~---~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i 224 (463)
T 2r9z_A 152 ---LGIT---SDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLLSATLAENMHAQGIET 224 (463)
T ss_dssp ---GSBC---HHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEE
T ss_pred ---ceec---HHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEE
Confidence 1222 3333333345789999999999999999999999999999999998874 89999999999999999999
Q ss_pred EcCCeEEEEEeCCCCcEEEEEeCCCc-EEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCCCCEEEEce
Q 011322 267 VKGASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGD 342 (488)
Q Consensus 267 ~~~~~v~~i~~~~~~~v~~v~~~~g~-~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD 342 (488)
++++++++++.++++ ..+.+++|+ ++++|.||+|+|++|++++ ++++|+..+ +|+|.||++++|+.|||||+||
T Consensus 225 ~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD 302 (463)
T 2r9z_A 225 HLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGD 302 (463)
T ss_dssp ESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGG
T ss_pred EeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEee
Confidence 999999999864333 467888998 8999999999999999873 577888876 6779999999999999999999
Q ss_pred ecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC---CCCCCCCceeEeccccCCCCcceeeeEeeCCCC-------
Q 011322 343 VAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT---HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------- 412 (488)
Q Consensus 343 ~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~---~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~------- 412 (488)
|+..+. .+..|..||+.+|.||++... ..|..+|+. .|..+. +..+|....
T Consensus 303 ~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~---~~~~~~------~a~vGl~e~~a~~~~g 363 (463)
T 2r9z_A 303 ITGRDQ----------LTPVAIAAGRRLAERLFDGQSERKLDYDNIPTV---VFAHPP------LSKVGLSEPEARERLG 363 (463)
T ss_dssp GGTSCC----------CHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEE---ECCSSC------EEEEECCHHHHHHHHC
T ss_pred cCCCcc----------cHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEE---EeCCCC------eEEEcCCHHHHHhcCC
Confidence 987432 566799999999999997532 235556642 232211 333443210
Q ss_pred -cEEE------------EccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHHHH-HHhcCCCCC-h-hhhcCCCcHHHH
Q 011322 413 -ETIE------------IGNFDPKIATFWID--SGKLKGVLVESGSPEEFQLLPT-LARSQPFVD-K-AKLQQASSVEEA 474 (488)
Q Consensus 413 -~~~~------------~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~~~-~-~~~~~~~~~~~~ 474 (488)
.+.. .......+.+++++ +++|+|+++++..+.++..... +++.+.+++ . ..++.|||++|+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 443 (463)
T 2r9z_A 364 DVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEE 443 (463)
T ss_dssp SCEEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGG
T ss_pred CCEEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHH
Confidence 1111 01112347777775 6899999987777777666644 478888776 2 335889999999
Q ss_pred HHHHH
Q 011322 475 LEIAR 479 (488)
Q Consensus 475 ~~~~~ 479 (488)
+..++
T Consensus 444 ~~~~~ 448 (463)
T 2r9z_A 444 LVTLK 448 (463)
T ss_dssp GGCCC
T ss_pred HHHHH
Confidence 88754
No 40
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=2.9e-41 Score=346.51 Aligned_cols=396 Identities=19% Similarity=0.220 Sum_probs=272.1
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CC---C--------------CCCccccCCCCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ER---P--------------ALTKGYLFPLDKKPA 109 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~---~--------------~l~~~~~~~~~~~~~ 109 (488)
+.++||+|||||+||++||..|++.|. +|+|||++..-.- .. | .....+.........
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~---~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGA---RAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKF 94 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 346899999999999999999999987 8999998742100 00 0 000000000000000
Q ss_pred CCCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCC--CCcCCC
Q 011322 110 RLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGGY 184 (488)
Q Consensus 110 ~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~--~~~g~~ 184 (488)
++....... ...........++..+++++.+ ++..++.....+. .+++++.||+||||||+.|..++ +++|..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~ 172 (478)
T 3dk9_A 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG-HAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGAS 172 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCc
Confidence 000000000 0000000122345679999886 5666777667777 46778999999999999876421 444422
Q ss_pred CCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCc
Q 011322 185 LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV 264 (488)
Q Consensus 185 ~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV 264 (488)
... +++.+......+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||
T Consensus 173 -----~~~---~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~~~~~l~~~gv 243 (478)
T 3dk9_A 173 -----LGI---TSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNCTEELENAGV 243 (478)
T ss_dssp -----GSB---CHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHTTC
T ss_pred -----eeE---chHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc-ccCHHHHHHHHHHHHHCCC
Confidence 111 2344444344579999999999999999999999999999999999996 4899999999999999999
Q ss_pred EEEcCCeEEEEEeCCCCcEEEEEeCC---C----cEEEcCEEEEeecCcCCCh-h-hHhcCCccc-CCCEEeCCCCCCCC
Q 011322 265 KFVKGASIKNLEAGSDGRVAAVKLED---G----STIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRM 334 (488)
Q Consensus 265 ~v~~~~~v~~i~~~~~~~v~~v~~~~---g----~~i~~D~vi~a~G~~p~~~-~-~~~~gl~~~-~g~i~vd~~~~t~~ 334 (488)
++++++.+++++..+++....+.+.+ | +++++|.|++|+|++|+++ + ++.+|+..+ +|+|.||++++|++
T Consensus 244 ~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~ 323 (478)
T 3dk9_A 244 EVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNV 323 (478)
T ss_dssp EEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSS
T ss_pred EEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCC
Confidence 99999999999865555223566665 2 5799999999999999987 4 788898875 67899999999999
Q ss_pred CCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCC-C--CCCCCCCceeEeccccCCCCcceeeeEeeCCC
Q 011322 335 PGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ-T--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNV 411 (488)
Q Consensus 335 ~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~-~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~ 411 (488)
|||||+|||+..+. .+..|..||+.+|.+|++.. . ..|..+|+ ..|..+- +..+|...
T Consensus 324 ~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~---~~~~~p~------~a~vGlte 384 (478)
T 3dk9_A 324 KGIYAVGDVCGKAL----------LTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPT---VVFSHPP------IGTVGLTE 384 (478)
T ss_dssp TTEEECGGGGCSSC----------CHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCE---EECCSSC------EEEEECCH
T ss_pred CCEEEEEecCCCCc----------cHhHHHHHHHHHHHHHcCCCCcccCCCCCCCe---EEECCCc------eEEeeCCH
Confidence 99999999996443 45668999999999999752 2 24555664 2333221 33444432
Q ss_pred Cc---------EEEE------------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHHHH-HHhcCCCCC--hhhh
Q 011322 412 GE---------TIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLLPT-LARSQPFVD--KAKL 465 (488)
Q Consensus 412 ~~---------~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~~~--~~~~ 465 (488)
.+ .... .+....+.|+.++ +++|+|+++++.++.++..... +|+.+.+++ ...+
T Consensus 385 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~ 464 (478)
T 3dk9_A 385 DEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV 464 (478)
T ss_dssp HHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC
T ss_pred HHHHhhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcc
Confidence 10 1100 0112346777664 5999999998888877776655 568888876 2445
Q ss_pred cCCCcHHHHHHH
Q 011322 466 QQASSVEEALEI 477 (488)
Q Consensus 466 ~~~~~~~~~~~~ 477 (488)
+.|||++|++..
T Consensus 465 ~~hPt~~e~~~~ 476 (478)
T 3dk9_A 465 AIHPTSSEELVT 476 (478)
T ss_dssp CCSSSSGGGGGS
T ss_pred cCCCChHHHHHh
Confidence 899999998864
No 41
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.8e-40 Score=338.60 Aligned_cols=397 Identities=19% Similarity=0.257 Sum_probs=271.4
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---CC-Ccccc---------------CCCCCCCCCCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---AL-TKGYL---------------FPLDKKPARLP 112 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---~l-~~~~~---------------~~~~~~~~~~~ 112 (488)
+||+|||||+||+++|..|++.|. +|+|||+++....... .. ++.++ ........++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~---~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 78 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGM---KVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLP 78 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCC---eEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHH
Confidence 689999999999999999999987 8999999864321100 00 00000 00000000000
Q ss_pred Cccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeC-CCcEEEeccEEecCCCCCCcCCCCcCCCCCcE
Q 011322 113 GFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGV 188 (488)
Q Consensus 113 ~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~-~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v 188 (488)
.+.... ..........++++.+++++.+. +..+++ +.+.+. +|+++.||+||+|||+.|.. |+.++.+..++
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~-~~~i~~--~~~~v~~~g~~~~~d~lviAtG~~p~~-~~~~g~~~~~v 154 (455)
T 2yqu_A 79 ALMAHKDKVVQANTQGVEFLFKKNGIARHQGT-ARFLSE--RKVLVEETGEELEARYILIATGSAPLI-PPWAQVDYERV 154 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESC-EEESSS--SEEEETTTCCEEEEEEEEECCCEEECC-CTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecC--CeEEEeeCCEEEEecEEEECCCCCCCC-CCCCCCCcCcE
Confidence 000000 00000001244566799999875 434443 444443 56789999999999998764 44455333333
Q ss_pred EEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEc
Q 011322 189 HYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 268 (488)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~ 268 (488)
.+ .....+....+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.||++++
T Consensus 155 ~~------~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~ 227 (455)
T 2yqu_A 155 VT------STEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEVSRAAERVFKKQGLTIRT 227 (455)
T ss_dssp EC------HHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHHTCEEEC
T ss_pred ec------hHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-cCHHHHHHHHHHHHHCCCEEEE
Confidence 32 2222222235789999999999999999999999999999999998874 7899999999999999999999
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecc
Q 011322 269 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAA 345 (488)
Q Consensus 269 ~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~ 345 (488)
+++|++++.++ +. ..+.+++|+++++|.||+|+|.+|+.++ ++..|+..+ +|++.||++++|+.|+|||+|||+.
T Consensus 228 ~~~V~~i~~~~-~~-v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~ 305 (455)
T 2yqu_A 228 GVRVTAVVPEA-KG-ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVR 305 (455)
T ss_dssp SCCEEEEEEET-TE-EEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSS
T ss_pred CCEEEEEEEeC-CE-EEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCC
Confidence 99999998643 33 3567778889999999999999999887 678888875 5779999999999999999999997
Q ss_pred cCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCC--CCCCceeEeccccCCCCcceeeeEeeCCCC-------cEEE
Q 011322 346 FPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTY--DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE 416 (488)
Q Consensus 346 ~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~~--~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~-------~~~~ 416 (488)
.+. .+..|..||+.+|.+|++.. ..+ ..+|+ ...++.. +..+|.... ++..
T Consensus 306 ~~~----------~~~~A~~~g~~aa~~i~~~~-~~~~~~~~p~--~~~~~~~-------~a~~G~~~~~a~~~g~~~~~ 365 (455)
T 2yqu_A 306 GPM----------LAHKASEEGIAAVEHMVRGF-GHVDYQAIPS--VVYTHPE-------IAAVGYTEEELKAQGIPYKV 365 (455)
T ss_dssp SCC----------CHHHHHHHHHHHHHHHHHSC-CCCCGGGCCE--EECSSSE-------EEEEECCHHHHHHHTCCEEE
T ss_pred Ccc----------CHHHHHHhHHHHHHHHcCCC-ccCCCCCCCE--EEEcCCc-------eEEEECCHHHHHHcCCCEEE
Confidence 542 45569999999999999743 333 33443 2222211 333443211 1111
Q ss_pred --E----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhcCCCCCh--hhhcCCCcHHHHHHHHH
Q 011322 417 --I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVDK--AKLQQASSVEEALEIAR 479 (488)
Q Consensus 417 --~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~ 479 (488)
. ......+.+++++ +++|+|+++++..+.++... ..+++++.+++. ...+.||+++|++..++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~ 445 (455)
T 2yqu_A 366 GKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAA 445 (455)
T ss_dssp EEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHH
T ss_pred EEEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHH
Confidence 0 0112457788775 79999999876766665544 456788888873 33588999999999998
Q ss_pred ccCCc
Q 011322 480 AALPV 484 (488)
Q Consensus 480 ~~~~~ 484 (488)
+++..
T Consensus 446 ~~~~~ 450 (455)
T 2yqu_A 446 LAAWE 450 (455)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 76543
No 42
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=5e-41 Score=343.26 Aligned_cols=395 Identities=20% Similarity=0.273 Sum_probs=276.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------CC--------------CCccccCCCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------PA--------------LTKGYLFPLDKKPA 109 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~------~~--------------l~~~~~~~~~~~~~ 109 (488)
.++||+|||||++|+++|..|++.|+ +|+|||++. ..... |. ....+.........
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~---~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGK---KVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRF 79 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC---EEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 45899999999999999999999987 899999943 11000 00 00000000000000
Q ss_pred CCCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEe-CCCcEEEeccEEecCCCCCCcCCCCcCCCC
Q 011322 110 RLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT-NSGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (488)
Q Consensus 110 ~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~-~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~ 185 (488)
++....... ..........++++.+++++.+ ++..++ .+++.+ .+++.+.||+||+|||+.|...|.++|.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~- 155 (463)
T 4dna_A 80 DWAKLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG--PNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHE- 155 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS--SSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGG-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--CCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCcc-
Confidence 000000000 0000001123345569999886 666554 467777 57788999999999999876234444422
Q ss_pred CcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcE
Q 011322 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265 (488)
Q Consensus 186 ~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~ 265 (488)
... +.+.+......+++++|||+|.+|+|+|..+.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||+
T Consensus 156 ----~~~---~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~ 227 (463)
T 4dna_A 156 ----LCI---TSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS-RFDQDMRRGLHAAMEEKGIR 227 (463)
T ss_dssp ----GCB---CHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCE
T ss_pred ----ccc---cHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCE
Confidence 122 2333333334689999999999999999999999999999999999886 48999999999999999999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEE-eCCCcEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCCCCEEEEc
Q 011322 266 FVKGASIKNLEAGSDGRVAAVK-LEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIG 341 (488)
Q Consensus 266 v~~~~~v~~i~~~~~~~v~~v~-~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~G 341 (488)
+++++.|++++..+++.+ .|. +++|+ +++|.||+|+|++|+..+ +++.|+..+ +|+|.||+++||++|+|||+|
T Consensus 228 i~~~~~v~~i~~~~~~~~-~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~G 305 (463)
T 4dna_A 228 ILCEDIIQSVSADADGRR-VATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALG 305 (463)
T ss_dssp EECSCCEEEEEECTTSCE-EEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECS
T ss_pred EECCCEEEEEEEcCCCEE-EEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEE
Confidence 999999999987544433 677 88998 999999999999999887 788899876 577999999999999999999
Q ss_pred eecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeEeccccCCCCcceeeeEeeCCCCc------
Q 011322 342 DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------ 413 (488)
Q Consensus 342 D~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~------ 413 (488)
||+..+. .+..|..||+.+|.||++.... .+..+|+. .|..+- +..+|....+
T Consensus 306 D~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p~------~a~vG~te~~a~~~~~ 366 (463)
T 4dna_A 306 DVTDRVQ----------LTPVAIHEAMCFIETEYKNNPTSPDHDLIATA---VFSQPE------IGTVGITEEEAARKFQ 366 (463)
T ss_dssp GGGSSCC----------CHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEE---ECSSSC------EEEEECCHHHHHHHSS
T ss_pred ecCCCCC----------ChHHHHHHHHHHHHHHcCCCCcccCCCCCCEE---EECCCC------eEEecCCHHHHHHcCC
Confidence 9998432 4567999999999999975433 34445542 333221 4445544321
Q ss_pred EEEEc-------------cCCCcEEEEEEE--CCEEEEEEeecCChHHhhHHHH-HHhcCCCCC-h-hhhcCCCcHHHHH
Q 011322 414 TIEIG-------------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLLPT-LARSQPFVD-K-AKLQQASSVEEAL 475 (488)
Q Consensus 414 ~~~~~-------------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~~~-~-~~~~~~~~~~~~~ 475 (488)
-+..+ +....+.|+.++ +++|+|+++++.++.++..... +|+.+.+++ . ..++.|||++|++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~ 446 (463)
T 4dna_A 367 EIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEEL 446 (463)
T ss_dssp EEEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGGG
T ss_pred CeEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHH
Confidence 01100 012346777765 5899999998888888776655 568888876 2 3459999999999
Q ss_pred HHHHcc
Q 011322 476 EIARAA 481 (488)
Q Consensus 476 ~~~~~~ 481 (488)
.+++..
T Consensus 447 ~~~~~~ 452 (463)
T 4dna_A 447 VTMYQP 452 (463)
T ss_dssp TCCCSC
T ss_pred HHHhhh
Confidence 988754
No 43
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.3e-40 Score=336.46 Aligned_cols=395 Identities=16% Similarity=0.226 Sum_probs=269.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-Ccccc-----------------CCCC--C
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TKGYL-----------------FPLD--K 106 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~---~~~l-~~~~~-----------------~~~~--~ 106 (488)
.++||+|||||+||++||..|++.|. +|+|||++.. ... +... ++.++ +... .
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~V~lie~~~~-GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~ 79 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGI---PTVLVEGQAL-GGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVAS 79 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTC---CEEEECSSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---EEEEEccCCC-CCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCC
Confidence 35799999999999999999999987 8999999432 100 0000 00000 0000 0
Q ss_pred CCCCCCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCC
Q 011322 107 KPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGG 183 (488)
Q Consensus 107 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~ 183 (488)
...++..+.... .........+++++.+++++.++.+ .++ .++|.+++ +++.||+||||||+.|..+|.++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~-~~~--~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~- 154 (458)
T 1lvl_A 80 PRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAK-VLD--GKQVEVDG-QRIQCEHLLLATGSSSVELPMLPL- 154 (458)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEE-EEE--TTEEEETT-EEEECSEEEECCCEEECCBTTBCC-
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEE-Ecc--CCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCc-
Confidence 000000000000 0000000124567789999987544 354 46788876 779999999999998864432331
Q ss_pred CCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcC
Q 011322 184 YLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNG 263 (488)
Q Consensus 184 ~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~G 263 (488)
+ ..+. + ..........+++++|||+|++|+|+|..|++.|.+|+++++.+++++ .+++++.+.+.+.+++.|
T Consensus 155 ~-~~v~---~---~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~g 226 (458)
T 1lvl_A 155 G-GPVI---S---STEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-TYDSELTAPVAESLKKLG 226 (458)
T ss_dssp B-TTEE---C---HHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHT
T ss_pred c-CcEe---c---HHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHCC
Confidence 1 1222 2 222322223578999999999999999999999999999999999998 589999999999999999
Q ss_pred cEEEcCCeEEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEeecCcCCChh--hHhcCCcccCCCEEeCCCCCCCCCCEEE
Q 011322 264 VKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSP--FERVGLNSSVGGIQVDGQFRTRMPGIFA 339 (488)
Q Consensus 264 V~v~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~~g~i~vd~~~~t~~~~Iya 339 (488)
|++++++++++++. +.+ .+...+| +++++|.||+|+|++|+.++ ++..|+..++++|.||++++|+.|+|||
T Consensus 227 v~i~~~~~v~~i~~---~~v-~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~~~t~~~~Iya 302 (458)
T 1lvl_A 227 IALHLGHSVEGYEN---GCL-LANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHNVWA 302 (458)
T ss_dssp CEEETTCEEEEEET---TEE-EEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTTCBCSSTTEEE
T ss_pred CEEEECCEEEEEEe---CCE-EEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCCCcCCCCCEEE
Confidence 99999999999984 223 3444456 68999999999999999886 6788888763389999999999999999
Q ss_pred EceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeEeccccCCCCcceeeeEeeCCCC-----
Q 011322 340 IGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG----- 412 (488)
Q Consensus 340 ~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~----- 412 (488)
+|||+..+. .+..|..||+.+|.+|++.. .+ +..+|+ ...++.. +..+|....
T Consensus 303 ~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~--~~~~~p~-------~a~vG~~e~~a~~~ 362 (458)
T 1lvl_A 303 IGDVAGEPM----------LAHRAMAQGEMVAEIIAGKA-RRFEPAAIAA--VCFTDPE-------VVVVGKTPEQASQQ 362 (458)
T ss_dssp CGGGGCSSC----------CHHHHHHHHHHHHHHHTTCC-CCCCCSCCCE--EECSSSE-------EEEEECCHHHHHHT
T ss_pred eeccCCCcc----------cHHHHHHHHHHHHHHhcCCC-ccCCCCCCCE--EEECCCC-------eEEEeCCHHHHHHc
Confidence 999998542 45569999999999999733 33 334453 2222211 233343211
Q ss_pred --cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhh-HHHHHHhcCCCCCh--hhhcCCCcHHH
Q 011322 413 --ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVDK--AKLQQASSVEE 473 (488)
Q Consensus 413 --~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~l~~~~~~~~~--~~~~~~~~~~~ 473 (488)
+... . ......+.+++++ +++|+|+++++..+.++. .+..+++++.+++. ..++.||+++|
T Consensus 363 g~~~~~~~~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 442 (458)
T 1lvl_A 363 GLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGE 442 (458)
T ss_dssp TCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTH
T ss_pred CCCEEEEEEECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHH
Confidence 1110 0 0112457788774 699999998777766655 44556788888762 33588999999
Q ss_pred HHHHHHccCCcc
Q 011322 474 ALEIARAALPVE 485 (488)
Q Consensus 474 ~~~~~~~~~~~~ 485 (488)
++..+++.+..+
T Consensus 443 ~~~~a~~~~~~~ 454 (458)
T 1lvl_A 443 AVQEAALRALGH 454 (458)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhcc
Confidence 999998765543
No 44
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=4.1e-41 Score=345.87 Aligned_cols=398 Identities=17% Similarity=0.151 Sum_probs=268.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------C--------------CCCccccCCCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------P--------------ALTKGYLFPLDKKPA 109 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~------~--------------~l~~~~~~~~~~~~~ 109 (488)
.++||+|||||+||++||..|++.|. +|+|||+++. .... | .....+-........
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~---~V~liE~~~~-GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~ 82 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTD---KVVLIEGGAY-GTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISV 82 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCS---CEEEEESSCS-SCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCC-CCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCcc
Confidence 35899999999999999999999987 8999999751 1000 0 000000000000000
Q ss_pred CCCCcccccC---CCCCCCCHhHHHHC-CcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC
Q 011322 110 RLPGFHTCVG---SGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (488)
Q Consensus 110 ~~~~~~~~~~---~~~~~~~~~~~~~~-~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~ 185 (488)
++..+..... ..........+... +++++.+ ...-.+ .++|.+.+++++.||+||||||+.|. .|+.++...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g-~a~~~~--~~~v~~~~~~~~~~d~lViATGs~p~-~p~~~~~~~ 158 (492)
T 3ic9_A 83 NGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRG-FAKFLD--EHTLQVDDHSQVIAKRIVIATGSRPN-YPEFLAAAG 158 (492)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEES-CEEEEE--TTEEEETTTEEEEEEEEEECCCEECC-CCHHHHTTG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEE-EEEEec--CCEEEEcCCcEEEeCEEEEccCCCCc-CCCCCCccC
Confidence 0000000000 00000000111111 3445543 333233 56888888889999999999999887 344333323
Q ss_pred CcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcE
Q 011322 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265 (488)
Q Consensus 186 ~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~ 265 (488)
+.+.+ ++.+......+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++. |+
T Consensus 159 ~~v~t------~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~-V~ 230 (492)
T 3ic9_A 159 SRLLT------NDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-QDEEMKRYAEKTFNEE-FY 230 (492)
T ss_dssp GGEEC------HHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-CCHHHHHHHHHHHHTT-SE
T ss_pred CcEEc------HHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-CCHHHHHHHHHHHhhC-cE
Confidence 33332 3334333446899999999999999999999999999999999999874 8999999999999988 99
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEeC--CC--cEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeC-CCCCCCCCCE
Q 011322 266 FVKGASIKNLEAGSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVD-GQFRTRMPGI 337 (488)
Q Consensus 266 v~~~~~v~~i~~~~~~~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd-~~~~t~~~~I 337 (488)
+++++.+++++..++ .+ .+.+. +| +++++|.|++|+|++|++++ ++.+|+..+ +|+|.|| ++++|+.|+|
T Consensus 231 i~~~~~v~~i~~~~~-~v-~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~I 308 (492)
T 3ic9_A 231 FDAKARVISTIEKED-AV-EVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHI 308 (492)
T ss_dssp EETTCEEEEEEECSS-SE-EEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTE
T ss_pred EEECCEEEEEEEcCC-EE-EEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCE
Confidence 999999999986533 33 35553 67 67999999999999999988 788899876 6789999 8999999999
Q ss_pred EEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcC-CCC--CCCCCCceeEeccccCCCCcceeeeEeeCCCCc-
Q 011322 338 FAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSA-QTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE- 413 (488)
Q Consensus 338 ya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~-~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~- 413 (488)
||+|||+..+. .+..|..||+.+|.+|++. ... .+..+|+ ..|..+ .+..+|....+
T Consensus 309 yA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~---~~~~~p------~~a~vGlte~~a 369 (492)
T 3ic9_A 309 FVAGDANNTLT----------LLHEAADDGKVAGTNAGAYPVIAQGQRRAPLS---VVFTEP------QVASVGLSLRQI 369 (492)
T ss_dssp EECGGGGTSSC----------SHHHHHHHHHHHHHHHHHTTSCCEECCCCCEE---EECSSS------EEEEEESCHHHH
T ss_pred EEEEecCCCCc----------cHHHHHHHHHHHHHHHcCCCCCcccCCCCCcE---EEECCC------CeEEecCCHHHH
Confidence 99999998643 4567999999999999973 222 2333443 223211 13344433210
Q ss_pred ----------EEEEc-------------cCCCcEEEEEEE--CCEEEEEEeecCChHHhhHHHH-HHhcCCCCC-h-hhh
Q 011322 414 ----------TIEIG-------------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLLPT-LARSQPFVD-K-AKL 465 (488)
Q Consensus 414 ----------~~~~~-------------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~~~-~-~~~ 465 (488)
-+..+ +....+.++.++ +++|+|+++++.++.++..... +|+.+.+++ . ..+
T Consensus 370 ~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~ 449 (492)
T 3ic9_A 370 EDLYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMP 449 (492)
T ss_dssp HHHCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSC
T ss_pred HhccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCC
Confidence 01111 112357777764 5899999998888888776654 568888876 2 345
Q ss_pred cCCCcHHHHHHHHHccCCc
Q 011322 466 QQASSVEEALEIARAALPV 484 (488)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~ 484 (488)
+.|||++|+++.+++++..
T Consensus 450 ~~hPt~~e~~~~a~~~~~~ 468 (492)
T 3ic9_A 450 FYHPVIEEGLRTALRDAQQ 468 (492)
T ss_dssp CCTTCTHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHH
Confidence 8899999999999887654
No 45
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=2.1e-41 Score=347.93 Aligned_cols=395 Identities=21% Similarity=0.270 Sum_probs=274.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------CC--------------CCccccCCCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------PA--------------LTKGYLFPLDKKPA 109 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~------~~--------------l~~~~~~~~~~~~~ 109 (488)
.++||+|||||+||++||..|++.|. +|+|||++. ..... |. ....+.........
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~ 100 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGK---RVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIF 100 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcC---EEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCcc
Confidence 35899999999999999999999987 899999943 11000 00 00000000000000
Q ss_pred CCCCcccc---cCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeC-CCcEEEeccEEecCCCCCCcCCCCcCCCC
Q 011322 110 RLPGFHTC---VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (488)
Q Consensus 110 ~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~-~g~~i~yd~lVlAtG~~~~~~~~~~g~~~ 185 (488)
++...... ...........++++.+++++.+ .+..++. +.+.+. +++.+.||+||||||+.+...|.++|.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~- 176 (484)
T 3o0h_A 101 NWEKLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVDE--HTLELSVTGERISAEKILIATGAKIVSNSAIKGSD- 176 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET--TEEEETTTCCEEEEEEEEECCCEEECCC--CBTGG-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeC--CEEEEecCCeEEEeCEEEEccCCCcccCCCCCCcc-
Confidence 00000000 00000001123446679999986 6777764 567776 7788999999999999876234444432
Q ss_pred CcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcE
Q 011322 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265 (488)
Q Consensus 186 ~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~ 265 (488)
.+.+ .+.+......+++++|||+|.+|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.+++.||+
T Consensus 177 -~~~~------~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~ 248 (484)
T 3o0h_A 177 -LCLT------SNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVAKGIS 248 (484)
T ss_dssp -GSBC------TTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCE
T ss_pred -cccc------HHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-cCHHHHHHHHHHHHHCCCE
Confidence 1111 1222222345799999999999999999999999999999999998875 8999999999999999999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChh--hHhcCCccc-CCCEEeCCCCCCCCCCEEEEce
Q 011322 266 FVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGD 342 (488)
Q Consensus 266 v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD 342 (488)
+++++.|++++..+ +.+ .+.+++|+++++|.||+|+|++|+..+ ++..|+..+ +|+|.||++++|++|+|||+||
T Consensus 249 i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD 326 (484)
T 3o0h_A 249 IIYEATVSQVQSTE-NCY-NVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGD 326 (484)
T ss_dssp EESSCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGG
T ss_pred EEeCCEEEEEEeeC-CEE-EEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEe
Confidence 99999999998653 344 688899999999999999999999887 778898876 5779999999999999999999
Q ss_pred ecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeEeccccCCCCcceeeeEeeCCCCc------E
Q 011322 343 VAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------T 414 (488)
Q Consensus 343 ~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~------~ 414 (488)
|+..+. .+..|..+|+.+|.+|++.... .+..+|+ ..|..+- +..+|....+ -
T Consensus 327 ~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~---~~~~~p~------~a~vGlte~~a~~~g~~ 387 (484)
T 3o0h_A 327 VTGHIQ----------LTPVAIHDAMCFVKNAFENTSTTPDYDLITT---AVFSQPE------IGTVGLSEEDALHRYKR 387 (484)
T ss_dssp GGTSCC----------CHHHHHHHHHHHHHHHHC---CCCCCTTCCE---EECCSSC------EEEEECCHHHHHHHCSE
T ss_pred cCCCCc----------CHHHHHHHHHHHHHHHcCCCCCcCCCCCCcE---EEECCCC------EEEeeCCHHHHHHcCCC
Confidence 997432 4567999999999999975433 3445564 2343221 4455544321 0
Q ss_pred EEEc-------------cCCCcEEEEEEE--CCEEEEEEeecCChHHhhHHHH-HHhcCCCCC--hhhhcCCCcHHHHHH
Q 011322 415 IEIG-------------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLLPT-LARSQPFVD--KAKLQQASSVEEALE 476 (488)
Q Consensus 415 ~~~~-------------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~~ 476 (488)
+..+ +....+.++.++ +++|+|+++++.++.++..... +++.+.+++ ...++.|||++|++.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~ 467 (484)
T 3o0h_A 388 VEIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELV 467 (484)
T ss_dssp EEEEEEEECCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGG
T ss_pred EEEEEecCCcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHH
Confidence 1110 112356777665 5899999998888877776655 468888876 244599999999999
Q ss_pred HHHcc
Q 011322 477 IARAA 481 (488)
Q Consensus 477 ~~~~~ 481 (488)
+++..
T Consensus 468 ~~~~~ 472 (484)
T 3o0h_A 468 TMYKP 472 (484)
T ss_dssp CCCSC
T ss_pred HHhhh
Confidence 88754
No 46
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=3.5e-40 Score=340.96 Aligned_cols=400 Identities=19% Similarity=0.237 Sum_probs=268.9
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCCcccc-------------------------C
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTKGYL-------------------------F 102 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~-~l~~~~~-------------------------~ 102 (488)
+.++||+|||||+||++||..|++.|. +|+|||+++..+.... .+-..++ +
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~ 106 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGK---KVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNY 106 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhc
Confidence 446899999999999999999999987 8999998652211100 0000000 0
Q ss_pred CCC--C-CCCCCCCcccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCc--EEEeccEEecCCCCC
Q 011322 103 PLD--K-KPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTA 174 (488)
Q Consensus 103 ~~~--~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~--~i~yd~lVlAtG~~~ 174 (488)
... . ...++........ ..........++..+++++.+ .+..+++....|...+|+ ++.||+||||||+.|
T Consensus 107 g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 107 GWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp TBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEE
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCc
Confidence 000 0 0000000000000 000000112345679999875 677788777777776664 799999999999988
Q ss_pred CcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHH
Q 011322 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (488)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~ 254 (488)
. .|+++|... ... +.+.+......+++++|||+|.+|+|+|..|+++|.+|+++++. .+++ .+++++.+.
T Consensus 186 ~-~p~i~G~~~----~~~---t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~-~~d~~~~~~ 255 (519)
T 3qfa_A 186 R-YLGIPGDKE----YCI---SSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLR-GFDQDMANK 255 (519)
T ss_dssp C-CCCCTTHHH----HCB---CHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSST-TSCHHHHHH
T ss_pred C-CCCCCCccC----ceE---cHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-cccc-cCCHHHHHH
Confidence 6 344444211 111 23333333345788999999999999999999999999999985 6666 479999999
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEeCCC---CcE-EEEEeCCCc---EEEcCEEEEeecCcCCChh--hHhcCCccc--CCC
Q 011322 255 YEQLYQQNGVKFVKGASIKNLEAGSD---GRV-AAVKLEDGS---TIDADTIVIGIGAKPTVSP--FERVGLNSS--VGG 323 (488)
Q Consensus 255 ~~~~l~~~GV~v~~~~~v~~i~~~~~---~~v-~~v~~~~g~---~i~~D~vi~a~G~~p~~~~--~~~~gl~~~--~g~ 323 (488)
+.+.+++.||++++++.+++++..++ +.+ ..+...+|. ++++|.|++|+|++|++++ ++..|++.+ +|+
T Consensus 256 ~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~ 335 (519)
T 3qfa_A 256 IGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGK 335 (519)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCC
T ss_pred HHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCe
Confidence 99999999999999988888765322 222 223345552 5789999999999999886 678888875 578
Q ss_pred EEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeEeccccCCCCcc
Q 011322 324 IQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRK 401 (488)
Q Consensus 324 i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~ 401 (488)
|.||+++||++|||||+|||+... ...+..|..||+.+|+||++.... .+..+|+ ..|..+
T Consensus 336 I~Vd~~~~Ts~~~IyA~GD~~~g~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~---~~~~~p----- 398 (519)
T 3qfa_A 336 IPVTDEEQTNVPYIYAIGDILEDK---------VELTPVAIQAGRLLAQRLYAGSTVKCDYENVPT---TVFTPL----- 398 (519)
T ss_dssp BCCCTTSBCSSTTEEECGGGBSSS---------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCE---EECSSS-----
T ss_pred EeeCCCCccCCCCEEEEEeccCCC---------CccHHHHHHHHHHHHHHHcCCCCccCCCCcCcE---EEECCC-----
Confidence 999999999999999999999421 125667899999999999975433 3444554 233221
Q ss_pred eeeeEeeCCCCc---------EEE-Ec------------cCCCcEEEEEEE---CCEEEEEEeecCChHHhhHHHH-HHh
Q 011322 402 VWWQFFGDNVGE---------TIE-IG------------NFDPKIATFWID---SGKLKGVLVESGSPEEFQLLPT-LAR 455 (488)
Q Consensus 402 ~~~~~~g~~~~~---------~~~-~~------------~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~-l~~ 455 (488)
.+..+|....+ +.. .. .....+.++.++ +++|+|+++++.++.++..... +|+
T Consensus 399 -~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~ 477 (519)
T 3qfa_A 399 -EYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALK 477 (519)
T ss_dssp -CEEEEECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred -ceEEecCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 13445543210 110 00 012357777765 4899999998888777765544 578
Q ss_pred cCCCCC--hhhhcCCCcHHHHHHHHHc
Q 011322 456 SQPFVD--KAKLQQASSVEEALEIARA 480 (488)
Q Consensus 456 ~~~~~~--~~~~~~~~~~~~~~~~~~~ 480 (488)
.+.+++ ...++.|||++|++..+..
T Consensus 478 ~~~t~~~l~~~~~~hPt~~E~~~~~~~ 504 (519)
T 3qfa_A 478 CGLTKKQLDSTIGIHPVCAEVFTTLSV 504 (519)
T ss_dssp TTCBHHHHHHSCCCTTCGGGGGGGCCC
T ss_pred CCCCHHHHhccccCCCChHHHHHHHHh
Confidence 888886 2445999999999987653
No 47
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=4.5e-41 Score=345.47 Aligned_cols=398 Identities=20% Similarity=0.220 Sum_probs=270.4
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC-CCC-CCCCcc---------------------------
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-YER-PALTKG--------------------------- 99 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~-~~~-~~l~~~--------------------------- 99 (488)
+.++||+|||||+||++||..|++.|. +|+|||+....+ -.. ..+-..
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~ 83 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGA---RVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAA 83 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---EEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHh
Confidence 356899999999999999999999987 899999532111 000 000000
Q ss_pred ccCCCCC-CCCCCCCcccccC---CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCc-EEEeccEEecCCCCC
Q 011322 100 YLFPLDK-KPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK-LLKYGSLIVATGCTA 174 (488)
Q Consensus 100 ~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~-~i~yd~lVlAtG~~~ 174 (488)
+-..... ...++..+..... ..........++..+++++.+ .+..++.....+.+.+|+ ++.||+||||||+.|
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p 162 (483)
T 3dgh_A 84 YGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRP 162 (483)
T ss_dssp TTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEECCCEEE
T ss_pred cCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCc
Confidence 0000000 0000000000000 000000112345678998875 666677666667777774 799999999999988
Q ss_pred CcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHH
Q 011322 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (488)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~ 254 (488)
. .|+++|.+.. .. +++.+......+++++|||+|.+|+|+|..|.++|.+|+++++. .+++ .+++++.+.
T Consensus 163 ~-~p~i~G~~~~----~~---~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~-~~d~~~~~~ 232 (483)
T 3dgh_A 163 R-YPDIPGAVEY----GI---TSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLR-GFDQQMAEL 232 (483)
T ss_dssp C-CCSSTTHHHH----CB---CHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSST-TSCHHHHHH
T ss_pred C-CCCCCCcccc----cC---cHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCCc-ccCHHHHHH
Confidence 6 3554442111 11 23333333345789999999999999999999999999999984 5665 479999999
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc-----EEEcCEEEEeecCcCCChhh--HhcCCcccCCCEEeC
Q 011322 255 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-----TIDADTIVIGIGAKPTVSPF--ERVGLNSSVGGIQVD 327 (488)
Q Consensus 255 ~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~-----~i~~D~vi~a~G~~p~~~~~--~~~gl~~~~g~i~vd 327 (488)
+.+.+++.||++++++.+++++..+++.+ .+.+.+++ ++++|.|++|+|++|+++++ +..|+..++|+|.||
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i~vd 311 (483)
T 3dgh_A 233 VAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVD 311 (483)
T ss_dssp HHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBBCCC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEEEEC
Confidence 99999999999999999999986545544 46666553 79999999999999999886 788998877889999
Q ss_pred CCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeEeccccCCCCcceeee
Q 011322 328 GQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQ 405 (488)
Q Consensus 328 ~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~ 405 (488)
++++|+.|+|||+|||+... ...+..|..||+.+|.||++.... .|..+|+. .|..+ .+.
T Consensus 312 ~~~~t~~~~IyA~GD~~~~~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p------~~a 373 (483)
T 3dgh_A 312 SQEATNVANIYAVGDIIYGK---------PELTPVAVLAGRLLARRLYGGSTQRMDYKDVATT---VFTPL------EYA 373 (483)
T ss_dssp TTCBCSSTTEEECSTTBTTS---------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE---ECSSS------EEE
T ss_pred cCCccCCCCEEEEEcccCCC---------CccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEE---EECCC------ccE
Confidence 99999999999999998421 114567999999999999975433 35556653 22211 133
Q ss_pred EeeCCCC---------cEE-EEc------------cCCCcEEEEEEE---CCEEEEEEeecCChHHhhHHHH-HHhcCCC
Q 011322 406 FFGDNVG---------ETI-EIG------------NFDPKIATFWID---SGKLKGVLVESGSPEEFQLLPT-LARSQPF 459 (488)
Q Consensus 406 ~~g~~~~---------~~~-~~~------------~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~-l~~~~~~ 459 (488)
.+|.... ... ... .....+.++.++ +++|+|+++++.++.++..... +|+++.+
T Consensus 374 ~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t 453 (483)
T 3dgh_A 374 CVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLT 453 (483)
T ss_dssp EEECCHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCB
T ss_pred EEeCCHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCC
Confidence 3443321 011 100 012347777664 4899999998888887776655 5688888
Q ss_pred CC--hhhhcCCCcHHHHHHHHH
Q 011322 460 VD--KAKLQQASSVEEALEIAR 479 (488)
Q Consensus 460 ~~--~~~~~~~~~~~~~~~~~~ 479 (488)
++ ...++.|||++|++..+.
T Consensus 454 ~~~l~~~~~~hPt~~e~~~~~~ 475 (483)
T 3dgh_A 454 INTLINTVGIHPTTAEEFTRLA 475 (483)
T ss_dssp HHHHHTSCCCSSCSGGGGGGCC
T ss_pred HHHHhhcccCCCChHHHHHHHH
Confidence 76 234589999999998765
No 48
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=5.4e-40 Score=337.75 Aligned_cols=398 Identities=19% Similarity=0.232 Sum_probs=270.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC-CCCCcc---------------------------cc
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER-PALTKG---------------------------YL 101 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~-~~l~~~---------------------------~~ 101 (488)
+++||+|||||+||++||..|++.|. +|+|||+.+..++.. ..+-.. +-
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g 81 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGK---KVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYG 81 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999987 899999843322110 000000 00
Q ss_pred CCCC-CCCCCCCCccccc---CCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--cEEEeccEEecCCCCCC
Q 011322 102 FPLD-KKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 102 ~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g--~~i~yd~lVlAtG~~~~ 175 (488)
.... ....++....... ...........+++.+++++.+ .+..+++....+.+.+| .++.||+||||||+.|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 82 WEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCC
Confidence 0000 0000000000000 0000000112345678998864 66666666666666676 47999999999999886
Q ss_pred cCCC-CcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHH
Q 011322 176 RFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (488)
Q Consensus 176 ~~~~-~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~ 254 (488)
. |+ ++|.+... . +++.+......+++++|||+|.+|+|+|..|.++|.+|+++++.. +++ .+++++.+.
T Consensus 161 ~-p~~i~G~~~~~----~---~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~l~-~~d~~~~~~ 230 (488)
T 3dgz_A 161 Y-PTQVKGALEYG----I---TSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-PLR-GFDQQMSSL 230 (488)
T ss_dssp C-CSSCBTHHHHC----B---CHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SST-TSCHHHHHH
T ss_pred C-CCCCCCccccc----C---cHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-ccc-cCCHHHHHH
Confidence 4 44 55532111 1 233333333467899999999999999999999999999999864 555 479999999
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC---Cc--EEEcCEEEEeecCcCCChh--hHhcCCccc--CCCEE
Q 011322 255 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TIDADTIVIGIGAKPTVSP--FERVGLNSS--VGGIQ 325 (488)
Q Consensus 255 ~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~~--~~~~gl~~~--~g~i~ 325 (488)
+.+.+++.||++++++.+++++..+++.+ .+.+.+ |+ ++++|.|++|+|++|++++ ++..++..+ +|+|.
T Consensus 231 l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~ 309 (488)
T 3dgz_A 231 VTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKII 309 (488)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEe
Confidence 99999999999999999999986444443 344443 54 4799999999999999987 678888875 67899
Q ss_pred eCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeEeccccCCCCccee
Q 011322 326 VDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVW 403 (488)
Q Consensus 326 vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~ 403 (488)
||+++||++|||||+|||+... ...+..|..||+.+|.||++.... .+..+|+.. |..+ .
T Consensus 310 vd~~~~t~~~~IyA~GD~~~~~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~---~~~p------~ 371 (488)
T 3dgz_A 310 VDAQEATSVPHIYAIGDVAEGR---------PELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTV---FTPL------E 371 (488)
T ss_dssp CCTTSBCSSTTEEECGGGBTTC---------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEE---CSSS------E
T ss_pred ECCCCccCCCCEEEeEEecCCC---------CcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEE---ECCC------C
Confidence 9999999999999999998521 114567999999999999975432 355566532 3221 1
Q ss_pred eeEeeCCCC---------cE-EEEc------------cCCCcEEEEEEE---CCEEEEEEeecCChHHhhHHHH-HHhcC
Q 011322 404 WQFFGDNVG---------ET-IEIG------------NFDPKIATFWID---SGKLKGVLVESGSPEEFQLLPT-LARSQ 457 (488)
Q Consensus 404 ~~~~g~~~~---------~~-~~~~------------~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~-l~~~~ 457 (488)
+..+|.... .. +... +....+.++.++ +++|+|+++++.++.++..... +|+++
T Consensus 372 ~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 451 (488)
T 3dgz_A 372 YGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCG 451 (488)
T ss_dssp EEEEECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred eEEEeCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 334444321 01 1110 012457777765 4999999998888877776654 56888
Q ss_pred CCCC--hhhhcCCCcHHHHHHHHHc
Q 011322 458 PFVD--KAKLQQASSVEEALEIARA 480 (488)
Q Consensus 458 ~~~~--~~~~~~~~~~~~~~~~~~~ 480 (488)
.+++ ...++.|||++|++..++.
T Consensus 452 ~t~~~l~~~~~~hPt~~e~~~~~~~ 476 (488)
T 3dgz_A 452 ASYAQVMQTVGIHPTCSEEVVKLHI 476 (488)
T ss_dssp CBHHHHHTSCCCSSCSTHHHHTCCE
T ss_pred CCHHHHhccccCCCChHHHHHHHHH
Confidence 8886 2346999999999988653
No 49
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=6.7e-41 Score=343.71 Aligned_cols=298 Identities=21% Similarity=0.279 Sum_probs=226.7
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
..++++|||||||+||+++|..|++.++ +|||||+++++.|. |.|+. .... ...+..+ .....
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~---~VtLId~~~~~~~~-PlL~~-va~G-~l~~~~i-----------~~p~~ 101 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKY---NVSIISPRSYFLFT-PLLPS-APVG-TVDEKSI-----------IEPIV 101 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTC---EEEEEESSSEEECG-GGGGG-TTTT-SSCGGGG-----------EEEHH
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCC---cEEEECCCCCcccc-cchhH-Hhhc-cccHHHh-----------hhhHH
Confidence 4567899999999999999999988765 89999999987664 55432 1111 0001000 00011
Q ss_pred hHH--HHCCcEEEeCCcEEEEeCCCcEEEeC--------------------CCcEEEeccEEecCCCCCCcCCCCcCCCC
Q 011322 128 EWY--KEKGIEMIYQDPVTSIDIEKQTLITN--------------------SGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (488)
Q Consensus 128 ~~~--~~~~v~~~~~~~v~~id~~~~~v~~~--------------------~g~~i~yd~lVlAtG~~~~~~~~~~g~~~ 185 (488)
... .+.+++++. .+|++||+++++|++. ++.+++||+||||||+.+.. +.+||..
T Consensus 102 ~~~~~~~~~v~~~~-~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~-~~ipG~~- 178 (502)
T 4g6h_A 102 NFALKKKGNVTYYE-AEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNT-FGIPGVT- 178 (502)
T ss_dssp HHHTTCSSCEEEEE-EEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECC-TTCTTHH-
T ss_pred HHHHhhcCCeEEEE-EEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCccccc-CCccCcc-
Confidence 221 235788887 4899999999988763 35679999999999999874 4445532
Q ss_pred CcEEEecCHHHHHHHHHhhh-----------------cCCeEEEECCcHHHHHHHHHHHhCC--------------CcEE
Q 011322 186 PGVHYIRDVADADALISSLE-----------------KAKKVVVVGGGYIGMEVAAAAVGWK--------------LDTT 234 (488)
Q Consensus 186 ~~v~~~~~~~~~~~~~~~~~-----------------~~~~vvVvG~G~~g~e~A~~l~~~g--------------~~vt 234 (488)
+..+.++++.++..+++.+. ...+++|||||++|+|+|.+|.+++ .+|+
T Consensus 179 e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~ 258 (502)
T 4g6h_A 179 DYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIH 258 (502)
T ss_dssp HHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEE
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeE
Confidence 33467888888876655431 1247999999999999999987643 5799
Q ss_pred EEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc----EEEcCEEEEeecCcCCC-
Q 011322 235 IIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS----TIDADTIVIGIGAKPTV- 309 (488)
Q Consensus 235 lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~----~i~~D~vi~a~G~~p~~- 309 (488)
++++.+++++. +++++++.+++.|+++||++++++.|++++. ++.+....++||+ ++++|.||||+|.+|+.
T Consensus 259 lve~~~~il~~-~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~ 335 (502)
T 4g6h_A 259 LVEALPIVLNM-FEKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATGNKARPV 335 (502)
T ss_dssp EECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCCEECCHH
T ss_pred EeccccccccC-CCHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccCCcCCHH
Confidence 99999999985 8999999999999999999999999999973 3434455667774 69999999999999983
Q ss_pred --hhhHhcCCccc-CCCEEeCCCCCC-CCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011322 310 --SPFERVGLNSS-VGGIQVDGQFRT-RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 310 --~~~~~~gl~~~-~g~i~vd~~~~t-~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
++....++..+ +|+|.||++||+ ++|||||+|||+..+.++ ..+.|.+||+.+|+||.+
T Consensus 336 ~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~--------~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 336 ITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPP--------TAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp HHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCC--------CHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCC--------chHHHHHHHHHHHHHHHH
Confidence 23445555544 688999999999 899999999999876543 566799999999999954
No 50
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=5e-40 Score=338.06 Aligned_cols=398 Identities=18% Similarity=0.215 Sum_probs=252.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-CCCCC-----------ccccCCC-----CCCCCCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-RPALT-----------KGYLFPL-----DKKPARLPG 113 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~-~~~l~-----------~~~~~~~-----~~~~~~~~~ 113 (488)
.+|++|||||+||++||.++++.|. +|+|||+.....+. +..+- |.++... ........+
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~---kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGA---RVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTC---CEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 3799999999999999999999987 89999976532211 11110 0000000 000000000
Q ss_pred cccc-cCCCC--------------CCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeC----CCcEEEeccEEecCCCCC
Q 011322 114 FHTC-VGSGG--------------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN----SGKLLKYGSLIVATGCTA 174 (488)
Q Consensus 114 ~~~~-~~~~~--------------~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~----~g~~i~yd~lVlAtG~~~ 174 (488)
+... ....+ .......+++.+|+++.+ ...-+++..-.|... +++++.+|++|||||++|
T Consensus 119 i~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G-~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P 197 (542)
T 4b1b_A 119 WKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYING-LAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRP 197 (542)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECE-EEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEE
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-eEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCC
Confidence 0000 00000 000123346678998875 444455433333332 335799999999999998
Q ss_pred CcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHH
Q 011322 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (488)
Q Consensus 175 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~ 254 (488)
..+|.+++ ....+ .+++.++.....+++++|||||++|+|+|..++++|.+||++.+. ++++. +|+++.+.
T Consensus 198 ~~P~~~~~-~~~~~------~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~-~~L~~-~D~ei~~~ 268 (542)
T 4b1b_A 198 HIPDDVEG-AKELS------ITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS-IVLRG-FDQQCAVK 268 (542)
T ss_dssp CCCSSSBT-HHHHC------BCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS-CSSTT-SCHHHHHH
T ss_pred CCCCcccC-CCccc------cCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc-ccccc-cchhHHHH
Confidence 74433222 11111 135556555567899999999999999999999999999999874 66764 89999999
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChh--hHhcCCccc-CCC-EEeCCCC
Q 011322 255 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGG-IQVDGQF 330 (488)
Q Consensus 255 ~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~--~~~~gl~~~-~g~-i~vd~~~ 330 (488)
+.+.|++.||++++++.+++++..+ +. ..+.+.+++++.+|.|++|+|++||++. ++..++..+ +++ +.+|+++
T Consensus 269 l~~~l~~~gi~~~~~~~v~~~~~~~-~~-~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~ 346 (542)
T 4b1b_A 269 VKLYMEEQGVMFKNGILPKKLTKMD-DK-ILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLS 346 (542)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEEET-TE-EEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTS
T ss_pred HHHHHHhhcceeecceEEEEEEecC-Ce-EEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccc
Confidence 9999999999999999999998653 33 3578889999999999999999999986 456777765 344 5789999
Q ss_pred CCCCCCEEEEceeccc-CCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeEeccccCCCCcceeeeEe
Q 011322 331 RTRMPGIFAIGDVAAF-PLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFF 407 (488)
Q Consensus 331 ~t~~~~Iya~GD~a~~-~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~ 407 (488)
||++|+|||+|||+.. |. ....|..+|+.++.++++.... .|..+|+ .+|..+- +..+
T Consensus 347 ~Ts~p~IyAiGDv~~~~p~----------La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~---~vft~Pe------iA~V 407 (542)
T 4b1b_A 347 CTNIPSIFAVGDVAENVPE----------LAPVAIKAGEILARRLFKDSDEIMDYSYIPT---SIYTPIE------YGAC 407 (542)
T ss_dssp BCSSTTEEECTTSBTTCCC----------CHHHHHHHHHHHHHHHHSCCCCCCCCSSCCE---EECSSSC------EEEE
T ss_pred cccCCCeEEeccccCCchh----------HHHHHHHHHHHHHHHHhcCCCcccCCCCCce---EEeCCCC------eEEE
Confidence 9999999999999963 22 2345889999999999985543 4556775 3343321 2233
Q ss_pred eCCCCc---------E-EE--------------------------EccCCCcEEEEEE-E--CCEEEEEEeecCChHHhh
Q 011322 408 GDNVGE---------T-IE--------------------------IGNFDPKIATFWI-D--SGKLKGVLVESGSPEEFQ 448 (488)
Q Consensus 408 g~~~~~---------~-~~--------------------------~~~~~~~~~~~~~-~--~~~~~g~~~~~~~~~~~~ 448 (488)
|....+ + +. .......|.++.. + +++|+|+++++.++.++.
T Consensus 408 GlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI 487 (542)
T 4b1b_A 408 GYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVT 487 (542)
T ss_dssp ECCHHHHHHHHCTTTEEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHH
T ss_pred eCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHH
Confidence 332110 0 00 0001123556553 3 589999999888888888
Q ss_pred HHHHH-HhcCCCCC--hhhhcCCCcHHHHHHHHHccC
Q 011322 449 LLPTL-ARSQPFVD--KAKLQQASSVEEALEIARAAL 482 (488)
Q Consensus 449 ~~~~l-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 482 (488)
+...+ |+.+.+++ ...++.|||++|++.++..++
T Consensus 488 ~~~alAi~~~~t~~dl~~~i~~HPTlsE~l~~~~~t~ 524 (542)
T 4b1b_A 488 QGMALALRLKVKKKDFDNCIGIHPTDAESFMNLFVTI 524 (542)
T ss_dssp HHHHHHHHTCCBHHHHHHC------------------
T ss_pred HHHHHHHHcCCCHHHHhccCCcCCCHHHHHHHHHHHH
Confidence 77665 68888876 244699999999999987764
No 51
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=1.3e-38 Score=335.57 Aligned_cols=397 Identities=17% Similarity=0.223 Sum_probs=264.3
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCCcccc-------------------------C
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTKGYL-------------------------F 102 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~-~l~~~~~-------------------------~ 102 (488)
..++||+|||||+||++||..|++.|. +|+|||+....+.... .+...++ +
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~---~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~ 181 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGA---KTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHF 181 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccEEEECCCccHHHHHHHHHhCCC---eEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhC
Confidence 446899999999999999999999987 8999997422111100 0000000 0
Q ss_pred CCCCCCCC-C-CCcccccCCCCCC--------CCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCC--cEEEeccEEecC
Q 011322 103 PLDKKPAR-L-PGFHTCVGSGGER--------QTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVAT 170 (488)
Q Consensus 103 ~~~~~~~~-~-~~~~~~~~~~~~~--------~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g--~~i~yd~lVlAt 170 (488)
... .+.. . ..+.... .+.. .....+...+++++.+ .+..++.....+...+| .++.||+|||||
T Consensus 182 g~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~~~~v~v~~~~g~~~~~~~d~lviAt 257 (598)
T 2x8g_A 182 GWS-LDRSKISHNWSTMV--EGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLISPHEVQITDKNQKVSTITGNKIILAT 257 (598)
T ss_dssp TCC-CCGGGCCCCHHHHH--HHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEEECC
T ss_pred Ccc-ccCCcCccCHHHHH--HHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcCCCEEEEEeCCCCeEEEEeCEEEEeC
Confidence 000 0000 0 0000000 0000 0011234568998864 56667765555555666 469999999999
Q ss_pred CCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHH
Q 011322 171 GCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPS 250 (488)
Q Consensus 171 G~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~ 250 (488)
|+.|. .|+++|.+. ... +.+.+......+++++|||+|++|+|+|..|+++|.+|+++++. .+++ .++++
T Consensus 258 Gs~p~-~p~i~G~~~-~~~------~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~-~~d~~ 327 (598)
T 2x8g_A 258 GERPK-YPEIPGAVE-YGI------TSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLR-GFDQQ 327 (598)
T ss_dssp CEEEC-CCSSTTHHH-HCE------EHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSST-TSCHH
T ss_pred CCCCC-CCCCCCccc-ceE------cHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcC-cCCHH
Confidence 99876 454444211 111 12333332345789999999999999999999999999999998 6665 47999
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEeC-----CC---CcE-EEEEeCCCcEEE--cCEEEEeecCcCCChh--hHhcCC
Q 011322 251 LAQRYEQLYQQNGVKFVKGASIKNLEAG-----SD---GRV-AAVKLEDGSTID--ADTIVIGIGAKPTVSP--FERVGL 317 (488)
Q Consensus 251 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~-----~~---~~v-~~v~~~~g~~i~--~D~vi~a~G~~p~~~~--~~~~gl 317 (488)
+.+.+.+.+++.||++++++.++++... ++ +.+ ..+.+.+|++++ +|.|++|+|++|++++ ++..|+
T Consensus 328 ~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl 407 (598)
T 2x8g_A 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGV 407 (598)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCC
T ss_pred HHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCc
Confidence 9999999999999999999988888532 11 333 123356787665 9999999999999887 577888
Q ss_pred ccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeEeccc
Q 011322 318 NSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFE 394 (488)
Q Consensus 318 ~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~--~~~~~~p~~~~~~~~ 394 (488)
..+ +|+|.||++++|+.|+|||+|||+... ...+..|..+|+.+|.+|++... ..|..+|+.+ |.
T Consensus 408 ~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~---~~ 475 (598)
T 2x8g_A 408 KLDKNGRVVCTDDEQTTVSNVYAIGDINAGK---------PQLTPVAIQAGRYLARRLFAGATELTDYSNVATTV---FT 475 (598)
T ss_dssp CBCTTSCBCCCTTSBCSSTTEEECGGGBTTS---------CCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEE---CS
T ss_pred eECCCCcEEeCCCCcCCCCCEEEEeeecCCC---------CccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEE---EC
Confidence 875 577999999999999999999996531 11566799999999999997543 2355566532 22
Q ss_pred cCCCCcceeeeEeeCCCC---------cEEEE------------c-cCCCcEEEEEEE---CCEEEEEEeecCChHHhhH
Q 011322 395 YEGSPRKVWWQFFGDNVG---------ETIEI------------G-NFDPKIATFWID---SGKLKGVLVESGSPEEFQL 449 (488)
Q Consensus 395 ~~g~~~~~~~~~~g~~~~---------~~~~~------------~-~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~ 449 (488)
.+ .+..+|.... ..... + .....+.++.++ +++|+|+++++.++.++..
T Consensus 476 ~~------~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~ 549 (598)
T 2x8g_A 476 PL------EYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQ 549 (598)
T ss_dssp SS------CEEEEECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHH
T ss_pred CC------ceEEEeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHH
Confidence 11 1333443211 01110 0 112347777765 6999999987777777665
Q ss_pred HHH-HHhcCCCCC--hhhhcCCCcHHHHHHHHHc
Q 011322 450 LPT-LARSQPFVD--KAKLQQASSVEEALEIARA 480 (488)
Q Consensus 450 ~~~-l~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 480 (488)
... +|+.+.+++ ...++.|||++|++..++.
T Consensus 550 ~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 583 (598)
T 2x8g_A 550 GYAVAIKMGATKADFDRTIGIHPTCSETFTTLHV 583 (598)
T ss_dssp HHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCCC
T ss_pred HHHHHHHcCCCHHHHhhccccCCCHHHHHHHHHH
Confidence 544 578888876 2446999999999988875
No 52
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=2.7e-39 Score=327.60 Aligned_cols=330 Identities=18% Similarity=0.164 Sum_probs=234.9
Q ss_pred cccccccceeeccccc--CCCCcccccc---ccccccccccccccc------cc---ccCCCCCeEEEEcCchHHHHHHH
Q 011322 3 SVSNSLSFKHGLSLWC--PQSPSLHRIR---HSSAKNFQRRGFVVA------YS---SFANENREFVIVGGGNAAGYAAR 68 (488)
Q Consensus 3 ~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~------~~---~~~~~~~~vvIIGgG~AGl~aA~ 68 (488)
..+|||+.+||++|.+ +|+.+|.+.. .++++....++..+. .. +.....++|+|||||+||+++|.
T Consensus 60 ~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~ 139 (456)
T 2vdc_G 60 QATNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAE 139 (456)
T ss_dssp HHHCSCHHHHHHHCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHH
T ss_pred HhhCCCCccccccCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHH
Confidence 3579999999999999 9999999985 566666666665321 11 11245689999999999999999
Q ss_pred HHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeC
Q 011322 69 TFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDI 148 (488)
Q Consensus 69 ~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~ 148 (488)
.|++.|+ +|+|||+++..... + .+..+....+..+ ..+..+++++.+++++.++.|.
T Consensus 140 ~L~~~G~---~V~v~e~~~~~GG~---l--~~gip~~~~~~~~-----------~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 140 ELRAKGY---EVHVYDRYDRMGGL---L--VYGIPGFKLEKSV-----------VERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp HHHHHTC---CEEEECSSSSCSTH---H--HHTSCTTTSCHHH-----------HHHHHHHHHHTTCEEETTCCBT----
T ss_pred HHHHCCC---eEEEEeccCCCCCe---e--eecCCCccCCHHH-----------HHHHHHHHHHCCcEEEeCCEec----
Confidence 9999987 79999998654210 0 0101110000000 1123466788899999886542
Q ss_pred CCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHH--H----------hhhcCCeEEEECCc
Q 011322 149 EKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALI--S----------SLEKAKKVVVVGGG 216 (488)
Q Consensus 149 ~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~--~----------~~~~~~~vvVvG~G 216 (488)
+.++++++. +.||+||||||+.....+.++|.+.+++++..++....... . ....+++|+|||+|
T Consensus 197 --~~v~~~~~~-~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG 273 (456)
T 2vdc_G 197 --RDASLPELR-RKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGG 273 (456)
T ss_dssp --TTBCHHHHH-SSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSS
T ss_pred --cEEEhhHhH-hhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCC
Confidence 223333332 57999999999974335567787778887654332221111 0 01357899999999
Q ss_pred HHHHHHHHHHHhCCC-cEEEEecCCCC-cccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe------
Q 011322 217 YIGMEVAAAAVGWKL-DTTIIFPENHL-LQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL------ 288 (488)
Q Consensus 217 ~~g~e~A~~l~~~g~-~vtlv~~~~~~-~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~------ 288 (488)
.+|+|+|..+.+.|. +|++++|++.+ ++. .+.+ .+.+++.||++++++.++++.. ++++.++.+
T Consensus 274 ~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~-~~~e-----~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~ 345 (456)
T 2vdc_G 274 DTAMDCVRTAIRQGATSVKCLYRRDRKNMPG-SQRE-----VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLG 345 (456)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSSCSTTCSS-CHHH-----HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEE
T ss_pred hhHHHHHHHHHHcCCCEEEEEEeCCccCCCC-CHHH-----HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEec
Confidence 999999999999988 49999998876 543 2222 2456788999999999998874 333322222
Q ss_pred ---C---------CC--cEEEcCEEEEeecCcCCCh--hhHhcCCccc-CCCEEeCCC-CCCCCCCEEEEceecccCCcc
Q 011322 289 ---E---------DG--STIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKM 350 (488)
Q Consensus 289 ---~---------~g--~~i~~D~vi~a~G~~p~~~--~~~~~gl~~~-~g~i~vd~~-~~t~~~~Iya~GD~a~~~~~~ 350 (488)
. +| .++++|.||+|+|+.|+.. +++++++..+ +|+|.||++ ++|+.|+|||+|||+..+.
T Consensus 346 ~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~-- 423 (456)
T 2vdc_G 346 VADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGAS-- 423 (456)
T ss_dssp EEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCC--
T ss_pred ccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCch--
Confidence 1 23 4699999999999999876 7888888875 688999997 9999999999999997643
Q ss_pred CCcccccccHHHHHHHHHHHHHHHhc
Q 011322 351 YDRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 351 ~~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
.+..|+.+|+.+|.+|..
T Consensus 424 --------~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 424 --------LVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp --------SHHHHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHHHH
Confidence 456688899999988864
No 53
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=7.9e-38 Score=306.39 Aligned_cols=298 Identities=18% Similarity=0.249 Sum_probs=219.3
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHh
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (488)
+++++|+|||||+||+++|..|++.|+ +|+|||+++....... ...+ .......+++.............+
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gg~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 73 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGL---SFRFVDPLPEPGGQLT-----ALYP-EKYIYDVAGFPKVYAKDLVKGLVE 73 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSCHHHH-----HTCT-TSEECCSTTCSSEEHHHHHHHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCeee-----ccCC-CceeeccCCCCCCCHHHHHHHHHH
Confidence 446899999999999999999999887 8999999875421100 0000 000011111110000000112234
Q ss_pred HHHHCCcEEEeCCcEEEEeCCC--cEEEeCCCcEEEeccEEecCCCC---CCcCCCCcCCCC---CcEEE-ecCHHHHHH
Q 011322 129 WYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCT---ASRFPEKIGGYL---PGVHY-IRDVADADA 199 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~~--~~v~~~~g~~i~yd~lVlAtG~~---~~~~~~~~g~~~---~~v~~-~~~~~~~~~ 199 (488)
.+++.+++++.+++|+.++.+. .+|.+.+++++.||+||+|||+. |. .+.++|.+. .++++ +++..
T Consensus 74 ~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~-~~~i~g~~~~~~~~~~~~~~~~~---- 148 (335)
T 2zbw_A 74 QVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPR-RIGAPGEREFEGRGVYYAVKSKA---- 148 (335)
T ss_dssp HHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEEC-CCCCTTTTTTBTTTEESSCSCGG----
T ss_pred HHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCC-CCCCCChhhccCcEEEEecCchh----
Confidence 4456789999899999998765 35777788889999999999984 43 333444321 12322 12111
Q ss_pred HHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCC
Q 011322 200 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 279 (488)
Q Consensus 200 ~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~ 279 (488)
...+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+++ .+...+.+.+.+++.||++++++.+++++.
T Consensus 149 ----~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~-- 219 (335)
T 2zbw_A 149 ----EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAHEEGRLEVLTPYELRRVEG-- 219 (335)
T ss_dssp ----GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHHHTTSSEEETTEEEEEEEE--
T ss_pred ----hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhccccCCeEEecCCcceeEcc--
Confidence 12579999999999999999999999999999999988765 356778888889999999999999999986
Q ss_pred CCcEEEEEeC---CC--cEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcc
Q 011322 280 DGRVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 354 (488)
Q Consensus 280 ~~~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~ 354 (488)
++.+..+.+. +| +++++|.||+|+|++|+.++++++++..++|++.||++++|+.|||||+|||+..+..
T Consensus 220 ~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~----- 294 (335)
T 2zbw_A 220 DERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMATSIPGVYACGDIVTYPGK----- 294 (335)
T ss_dssp SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCBCSSTTEEECSTTEECTTC-----
T ss_pred CCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCCCCCCCEEEeccccccCcc-----
Confidence 3444456665 67 5799999999999999998999999988788999999999999999999999986532
Q ss_pred cccccHHHHHHHHHHHHHHHhc
Q 011322 355 ARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 355 ~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
...+..|..+|+.+|++|.+
T Consensus 295 --~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 295 --LPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp --CCCHHHHHHHHHHHHHHHHH
T ss_pred --hhhhhhhHHHHHHHHHHHHH
Confidence 22567788999999999875
No 54
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=8.3e-38 Score=309.42 Aligned_cols=300 Identities=22% Similarity=0.339 Sum_probs=219.6
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHh
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (488)
++++||+|||||+||+++|..|++.|+ +|+|||+++....... ...+ .......+++...........+.+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gg~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 82 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNI---SCRIIESMPQLGGQLA-----ALYP-EKHIYDVAGFPEVPAIDLVESLWA 82 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHH-----HTCT-TSEECCSTTCSSEEHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCCCCCccc-----ccCC-CcccccCCCCCCCCHHHHHHHHHH
Confidence 446899999999999999999999887 8999999865421100 0000 000011111111000000112234
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc---EEEeCCCcEEEeccEEecCCCCCC--cCCCCcC-C-CCC--cEEE-ecCHHHHH
Q 011322 129 WYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS--RFPEKIG-G-YLP--GVHY-IRDVADAD 198 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~~~---~v~~~~g~~i~yd~lVlAtG~~~~--~~~~~~g-~-~~~--~v~~-~~~~~~~~ 198 (488)
.+++.+++++.+++|+.++.... .|++.+|+++.||+||+|||+.+. ..+.+++ . ... ++++ +++..
T Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~--- 159 (360)
T 3ab1_A 83 QAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVE--- 159 (360)
T ss_dssp HHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGG---
T ss_pred HHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHH---
Confidence 45567899999889999987643 788888888999999999999431 1333444 2 222 2332 12211
Q ss_pred HHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeC
Q 011322 199 ALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG 278 (488)
Q Consensus 199 ~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~ 278 (488)
...+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+++. +...+.+.+.+++.||++++++++++++.+
T Consensus 160 -----~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~---~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~ 231 (360)
T 3ab1_A 160 -----DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH---GKTAHEVERARANGTIDVYLETEVASIEES 231 (360)
T ss_dssp -----GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC---SHHHHSSHHHHHHTSEEEESSEEEEEEEEE
T ss_pred -----HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC---HHHHHHHHHHhhcCceEEEcCcCHHHhccC
Confidence 125799999999999999999999999999999999877652 456777888888999999999999999864
Q ss_pred CCCcEEEEEeC--CC--cEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcc
Q 011322 279 SDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 354 (488)
Q Consensus 279 ~~~~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~ 354 (488)
++++..|.+. +| +++++|.||+|+|++|+.++++.+++..++|+|.||++++|++|+|||+|||+..+..
T Consensus 232 -~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~----- 305 (360)
T 3ab1_A 232 -NGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGK----- 305 (360)
T ss_dssp -TTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCTTSBCSSTTEEECSTTEECTTC-----
T ss_pred -CCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecCCCcCCCCCEEEecCccCCCCc-----
Confidence 4555556664 77 5799999999999999999999999887788999999999999999999999986532
Q ss_pred cccccHHHHHHHHHHHHHHHhc
Q 011322 355 ARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 355 ~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
...+..|..||+.+|++|.+
T Consensus 306 --~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 306 --LKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp --CCSHHHHHHHHHHHHHHHHH
T ss_pred --cceeehhHHHHHHHHHHHHh
Confidence 22567789999999999875
No 55
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.4e-37 Score=298.86 Aligned_cols=293 Identities=22% Similarity=0.299 Sum_probs=209.2
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
+.+.+||+||||||||++||.+|++.|+ +|+|||++.. .. .++.. . ...++|++....+.+......
T Consensus 3 te~~yDvvIIG~GpAGl~aA~~l~~~g~---~V~liE~~~~--gG------~~~~~-~-~i~~~p~~~~~~~~~~~~~~~ 69 (312)
T 4gcm_A 3 TEIDFDIAIIGAGPAGMTAAVYASRANL---KTVMIERGIP--GG------QMANT-E-EVENFPGFEMITGPDLSTKMF 69 (312)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT--TG------GGGGC-S-CBCCSTTCSSBCHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCC--CC------eeecc-c-ccCCcCCccccchHHHHHHHH
Confidence 3456999999999999999999999987 8999998632 11 01100 0 011122222111111112233
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCC---cEEEecCHHHHHHHHHhh
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLP---GVHYIRDVADADALISSL 204 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~---~v~~~~~~~~~~~~~~~~ 204 (488)
.++.+.+..+..+..+...+.....+...+++++.||+||||||+.|+ .|++||.+.. ++.+. .......
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~-~~~ipG~~~~~~~~v~~~------~~~~~~~ 142 (312)
T 4gcm_A 70 EHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYK-KIGVPGEQELGGRGVSYC------AVCDGAF 142 (312)
T ss_dssp HHHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEEC-CCCCTTTTTTBTTTEESC------HHHHGGG
T ss_pred HHHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccC-cCCCCChhhhCCccEEee------eccCccc
Confidence 455667788887777777777777777788889999999999999887 4556664432 23322 1222334
Q ss_pred hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCc--
Q 011322 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGR-- 282 (488)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~-- 282 (488)
..+|+++|||+|++|+|+|..|+++|.+||++++.+++++.. . ...+.+++.++.......+......+...
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQR---I---LQDRAFKNDKIDFIWSHTLKSINEKDGKVGS 216 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCH---H---HHHHHHHCTTEEEECSEEEEEEEEETTEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcch---h---HHHHHHHhcCcceeeecceeeeecccccccc
Confidence 568999999999999999999999999999999999887641 1 22345677889988887777665432211
Q ss_pred EEEEEe--CCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccH
Q 011322 283 VAAVKL--EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 360 (488)
Q Consensus 283 v~~v~~--~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~ 360 (488)
...... .++..+++|.|++++|.+|+..+++..++..++|+|.||+++|||+|||||+|||+..+.. .+
T Consensus 217 ~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~~---------~~ 287 (312)
T 4gcm_A 217 VTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLR---------QI 287 (312)
T ss_dssp EEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBCSSTTEEECSTTBSCSCC---------SH
T ss_pred ceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCccCCCCEEEEeecCCCcch---------HH
Confidence 111122 2345799999999999999999999999988888999999999999999999999974321 34
Q ss_pred HHHHHHHHHHHHHHh
Q 011322 361 DHARQSAQHCIKALL 375 (488)
Q Consensus 361 ~~A~~~g~~~a~~i~ 375 (488)
..|..+|+.||.++.
T Consensus 288 ~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 288 VTATGDGSIAAQSAA 302 (312)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 568888999988875
No 56
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.8e-36 Score=294.84 Aligned_cols=290 Identities=21% Similarity=0.251 Sum_probs=213.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
+++||+|||||+||+++|..|++.|+ +|+|||++ .. ... .. ......++++.............++
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~--~g-g~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYML---KTLVIGET--PG-GQL------TE--AGIVDDYLGLIEIQASDMIKVFNKH 79 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESS--TT-GGG------GG--CCEECCSTTSTTEEHHHHHHHHHHH
T ss_pred CccCEEEECccHHHHHHHHHHHHCCC---cEEEEecc--CC-Cee------cc--cccccccCCCCCCCHHHHHHHHHHH
Confidence 35799999999999999999999987 79999997 11 100 00 0000111111111111111223455
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--cEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC---CcEEEecCHHHHHHHHHhh
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~--~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~ 204 (488)
+++.+++++. ++|++++.+. ..+.+.++.++.||+||+|||+.+. .+.+++... +++++. .......
T Consensus 80 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~-~~~i~g~~~~~~~~~~~~------~~~~~~~ 151 (323)
T 3f8d_A 80 IEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR-KLGVPGEQEFAGRGISYC------SVADAPL 151 (323)
T ss_dssp HHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC-CCCCTTTTTTBTTTEESC------HHHHGGG
T ss_pred HHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc-cCCCCchhhhcCCceEEe------ccCCHhH
Confidence 5677999998 8999998774 4678888888999999999999876 455555433 444332 1122234
Q ss_pred hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEE
Q 011322 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (488)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~ 284 (488)
..+++++|+|+|.+|+|+|..|.+.+.+|+++++.+++++ ++. .+.+.+++.||++++++.+++++.+ +.+.
T Consensus 152 ~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~ 223 (323)
T 3f8d_A 152 FKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPI---YVETVKKKPNVEFVLNSVVKEIKGD--KVVK 223 (323)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEES--SSEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CHH---HHHHHHhCCCcEEEeCCEEEEEecc--Ccee
Confidence 5689999999999999999999999999999999988775 332 2333444559999999999999854 4455
Q ss_pred EEEeCC---Cc--EEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccc
Q 011322 285 AVKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVE 358 (488)
Q Consensus 285 ~v~~~~---g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~ 358 (488)
.+.+.+ |+ ++++|.||+++|++|+.++++.+++..+ +|+|.||++++|+.|||||+|||+..+. ...
T Consensus 224 ~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~-------~~~ 296 (323)
T 3f8d_A 224 QVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWL-------GFR 296 (323)
T ss_dssp EEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTT-------TCC
T ss_pred EEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCC-------ccc
Confidence 677765 76 7999999999999999999999999865 6889999999999999999999998641 022
Q ss_pred cHHHHHHHHHHHHHHHhc
Q 011322 359 HVDHARQSAQHCIKALLS 376 (488)
Q Consensus 359 ~~~~A~~~g~~~a~~i~~ 376 (488)
.+..|..+|+.+|.++..
T Consensus 297 ~~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 297 QVITAVAQGAVAATSAYR 314 (323)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred ceeehhhHHHHHHHHHHH
Confidence 567788899998888863
No 57
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.6e-37 Score=303.56 Aligned_cols=293 Identities=17% Similarity=0.234 Sum_probs=214.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
+++||+|||||+||+++|..|++.|+ +|+|||+++...... . ...+ ......++++.............++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gG~~----~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQA---SVKIIESLPQLGGQL----S-ALYP-EKYIYDVAGFPKIRAQELINNLKEQ 76 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHH----H-HHCT-TSEECCSTTCSSEEHHHHHHHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCC---CEEEEEcCCCCCcee----h-hcCC-CceEeccCCCCCCCHHHHHHHHHHH
Confidence 35799999999999999999999887 899999987543100 0 0000 0000111211111111111223345
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc---EEEeCCCcEEEeccEEecCCC---CCCcCCCCcCCCC---CcEEEecCHHHHHHH
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGC---TASRFPEKIGGYL---PGVHYIRDVADADAL 200 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~---~v~~~~g~~i~yd~lVlAtG~---~~~~~~~~~g~~~---~~v~~~~~~~~~~~~ 200 (488)
+++.+++++++++|+.++...+ .+.+.+++ +.||+||+|||+ .+. .+.+++... ..+++ ...+..
T Consensus 77 ~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~-~~~~~g~~~~~g~~~~~--~~~~~~-- 150 (332)
T 3lzw_A 77 MAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR-KLELENAEQYEGKNLHY--FVDDLQ-- 150 (332)
T ss_dssp HTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC-CCCCTTGGGGBTTTEES--SCSCGG--
T ss_pred HHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC-CCCCCChhhccCceEEE--ecCCHH--
Confidence 5567899999999999998765 78888887 999999999999 554 344455332 23332 111111
Q ss_pred HHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCC
Q 011322 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 280 (488)
Q Consensus 201 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~ 280 (488)
...+++++|||+|.+|+|+|..|.+.+.+|+++++.+++.+. ++ ..+.+++.||+++.++.+++++.+++
T Consensus 151 ---~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~--~~-----~~~~l~~~gv~~~~~~~v~~i~~~~~ 220 (332)
T 3lzw_A 151 ---KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH--EH-----SVENLHASKVNVLTPFVPAELIGEDK 220 (332)
T ss_dssp ---GGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC--HH-----HHHHHHHSSCEEETTEEEEEEECSSS
T ss_pred ---HcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc--HH-----HHHHHhcCCeEEEeCceeeEEecCCc
Confidence 125799999999999999999999999999999999887542 22 23447889999999999999985432
Q ss_pred CcEEEEEeCC-----CcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCccc
Q 011322 281 GRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 355 (488)
Q Consensus 281 ~~v~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~ 355 (488)
+..+.+.+ ++++++|.||+|+|++|+.++++.+++..++|+|.||++++|+.|||||+|||+..+..
T Consensus 221 --~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~------ 292 (332)
T 3lzw_A 221 --IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGK------ 292 (332)
T ss_dssp --CCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSBCSSTTEEECGGGEECTTC------
T ss_pred --eEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCceecCCEEEccceecCCCC------
Confidence 33566655 45799999999999999999999999988888999999999999999999999976432
Q ss_pred ccccHHHHHHHHHHHHHHHhc
Q 011322 356 RVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 356 ~~~~~~~A~~~g~~~a~~i~~ 376 (488)
...+..|..+|+.+|.+|+.
T Consensus 293 -~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 293 -VNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp -CCCHHHHHHHHHHHHHHHHH
T ss_pred -cceEeeehhhHHHHHHHHHH
Confidence 22567788999999998875
No 58
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=2.3e-37 Score=342.43 Aligned_cols=348 Identities=17% Similarity=0.177 Sum_probs=243.5
Q ss_pred cccccccceeeccccc--CCCCcccccc---cccccccccccccccc---------ccc--------CCCCCeEEEEcCc
Q 011322 3 SVSNSLSFKHGLSLWC--PQSPSLHRIR---HSSAKNFQRRGFVVAY---------SSF--------ANENREFVIVGGG 60 (488)
Q Consensus 3 ~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~--------~~~~~~vvIIGgG 60 (488)
..+|||+.+||++|.+ +|+.+|.+.. .++++..+.|+..+.. .|. ....++|+|||||
T Consensus 117 ~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~VvVIGgG 196 (1025)
T 1gte_A 117 FSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAG 196 (1025)
T ss_dssp HHHCTTHHHHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEEEECCS
T ss_pred HhcCChhHhhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCccccccccCCccCCCEEEEECcc
Confidence 3589999999999987 9999999965 6788877777766531 010 1235799999999
Q ss_pred hHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHHHHCCcEEEeC
Q 011322 61 NAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQ 140 (488)
Q Consensus 61 ~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 140 (488)
+||++||..|++.|+. +|+|||+++..... + .+..+. ..++. . ......+++++.+++++.+
T Consensus 197 pAGl~aA~~L~~~G~~--~Vtv~E~~~~~GG~---~--~~~ip~----~~~~~--~-----~~~~~~~~~~~~gv~~~~~ 258 (1025)
T 1gte_A 197 PASISCASFLARLGYS--DITIFEKQEYVGGL---S--TSEIPQ----FRLPY--D-----VVNFEIELMKDLGVKIICG 258 (1025)
T ss_dssp HHHHHHHHHHHHTTCC--CEEEEESSSSCSTH---H--HHTSCT----TTSCH--H-----HHHHHHHHHHTTTCEEEES
T ss_pred HHHHHHHHHHHhcCCC--cEEEEeCCCCCCcc---c--cccCCc----ccCCH--H-----HHHHHHHHHHHCCcEEEcc
Confidence 9999999999999872 69999998654221 0 000010 01100 0 0011235677889999998
Q ss_pred CcEEEEeCCCcEEEeCCCcEEEeccEEecCCCC-CCcCCCCcCCC-CCcEEEecCHHHHHHHHHh----------hhcCC
Q 011322 141 DPVTSIDIEKQTLITNSGKLLKYGSLIVATGCT-ASRFPEKIGGY-LPGVHYIRDVADADALISS----------LEKAK 208 (488)
Q Consensus 141 ~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~-~~~~~~~~g~~-~~~v~~~~~~~~~~~~~~~----------~~~~~ 208 (488)
+.+. .+.++++++..+.||+||||||+. +..++..+|.. .+++++..++......... ...++
T Consensus 259 ~~v~-----~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~ 333 (1025)
T 1gte_A 259 KSLS-----ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRG 333 (1025)
T ss_dssp CCBS-----TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCS
T ss_pred cEec-----cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCC
Confidence 6652 134555555557899999999984 66444333422 4567664332221111100 12357
Q ss_pred eEEEECCcHHHHHHHHHHHhCCC-cEEEEecCCC-CcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEE
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH-LLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 286 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~-~vtlv~~~~~-~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v 286 (488)
+|+|||||.+|+|+|..+.++|. +||++++.+. +++ .+++++ +.+++.||++++++.++++..+ ++++..+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~-~~~~e~-----~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v 406 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIR-AVPEEV-----ELAKEEKCEFLPFLSPRKVIVK-GGRIVAV 406 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCC-SCHHHH-----HHHHHTTCEEECSEEEEEEEEE-TTEEEEE
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCC-CCHHHH-----HHHHHcCCEEEeCCCceEEEcc-CCeEEEE
Confidence 99999999999999999999996 8999999884 444 344433 4567889999999999999753 5666556
Q ss_pred EeC------CC---------cEEEcCEEEEeecCcCC-ChhhHh-cCCccc-CCCEEeCC-CCCCCCCCEEEEceecccC
Q 011322 287 KLE------DG---------STIDADTIVIGIGAKPT-VSPFER-VGLNSS-VGGIQVDG-QFRTRMPGIFAIGDVAAFP 347 (488)
Q Consensus 287 ~~~------~g---------~~i~~D~vi~a~G~~p~-~~~~~~-~gl~~~-~g~i~vd~-~~~t~~~~Iya~GD~a~~~ 347 (488)
.+. +| +++++|.||+|+|++|+ ..++.+ .|+..+ +|+|.||+ +++|+.|+|||+|||+..+
T Consensus 407 ~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~ 486 (1025)
T 1gte_A 407 QFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMA 486 (1025)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSC
T ss_pred EEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCc
Confidence 542 23 36899999999999864 556666 488876 67799997 8999999999999999854
Q ss_pred CccCCcccccccHHHHHHHHHHHHHHHhc------C-CCCCCCCCCceeE
Q 011322 348 LKMYDRTARVEHVDHARQSAQHCIKALLS------A-QTHTYDYLPYFYS 390 (488)
Q Consensus 348 ~~~~~~~~~~~~~~~A~~~g~~~a~~i~~------~-~~~~~~~~p~~~~ 390 (488)
. .+..|..+|+.+|.+|.+ + ....++.+||||+
T Consensus 487 ~----------~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ 526 (1025)
T 1gte_A 487 N----------TTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYT 526 (1025)
T ss_dssp C----------CHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCC
T ss_pred h----------HHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCcccccc
Confidence 3 344578889999888863 1 2224577999998
No 59
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=2.5e-36 Score=305.33 Aligned_cols=302 Identities=20% Similarity=0.207 Sum_probs=214.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
.++|||||||+||++||.+|++.+. +.+|||||+++++.|. |.+.. +... .....++ .....+++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~-~~~VtlI~~~~~~~~~-p~l~~-v~~g-~~~~~~i-----------~~~~~~~~ 66 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFT-PAFPH-LAMG-WRKFEDI-----------SVPLAPLL 66 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECG-GGHHH-HHHT-CSCGGGS-----------EEESTTTG
T ss_pred CCcEEEECCCHHHHHHHHHHhccCc-CCeEEEEcCCCCCccC-ccHHH-HhcC-CCCHHHh-----------hhcHHHHH
Confidence 4689999999999999999999875 6799999999988774 54432 1111 1111111 12234556
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhh---cC
Q 011322 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE---KA 207 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~---~~ 207 (488)
++.+++++.+ +|+.||+++++|++++|+++.||+||||||+++. + .++|.. ++...+.+..++.++++.+. ..
T Consensus 67 ~~~gv~~i~~-~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~-~i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~ 142 (430)
T 3hyw_A 67 PKFNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-F-GAEGQE-ENSTSICTAEHALETQKKLQELYAN 142 (430)
T ss_dssp GGGTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-C-CSBTHH-HHSCCCSSHHHHHHHHHHHHHHHHS
T ss_pred HHCCcEEEEe-EEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-C-CccCcc-cCcCCcccHHHHHHHHHHHHhhccC
Confidence 7789999875 8999999999999999999999999999998753 3 344432 33456777777776665543 34
Q ss_pred CeEEEECCcH------HHHHHH----HHHHhCC----CcEEEEecCCCCcc--cccCHHHHHHHHHHHHHcCcEEEcCCe
Q 011322 208 KKVVVVGGGY------IGMEVA----AAAVGWK----LDTTIIFPENHLLQ--RLFTPSLAQRYEQLYQQNGVKFVKGAS 271 (488)
Q Consensus 208 ~~vvVvG~G~------~g~e~A----~~l~~~g----~~vtlv~~~~~~~~--~~~~~~~~~~~~~~l~~~GV~v~~~~~ 271 (488)
+.++|+|++. .+.|++ ..+.+.+ .++++++..+.+.. ....+...+.+++.++++||++++++.
T Consensus 143 ~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~ 222 (430)
T 3hyw_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVA 222 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCE
T ss_pred CceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCce
Confidence 5566665542 233444 3445554 46888887765532 234567788899999999999999999
Q ss_pred EEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEeecCcCCChhhHhcCCc--cc-CCCEEeCCCCC-CCCCCEEEEceecc
Q 011322 272 IKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERVGLN--SS-VGGIQVDGQFR-TRMPGIFAIGDVAA 345 (488)
Q Consensus 272 v~~i~~~~~~~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~--~~-~g~i~vd~~~~-t~~~~Iya~GD~a~ 345 (488)
|++++.+ .+ .+...+| +++++|.+++++|.+|+ +++..+++. .+ +|.+.||+++| |++|||||+|||+.
T Consensus 223 v~~v~~~---~~-~~~~~~g~~~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~ 297 (430)
T 3hyw_A 223 VKAIEPD---KV-IYEDLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTA 297 (430)
T ss_dssp EEEECSS---EE-EEECTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBC
T ss_pred EEEEeCC---ce-EEEeeCCCceEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEe
Confidence 9999732 22 2333343 57999999999999998 677666543 34 35689999999 79999999999999
Q ss_pred cCCccCCc--ccccccHHHHHHHHHHHHHHHhc
Q 011322 346 FPLKMYDR--TARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 346 ~~~~~~~~--~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
.|...... .....+.+.|.+||+.+|+||+.
T Consensus 298 ~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 298 IPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp CCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCcccCcCcCccchHHHHHHHHHHHHHHHHHH
Confidence 87532111 11123556799999999999975
No 60
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=8.6e-36 Score=289.91 Aligned_cols=289 Identities=24% Similarity=0.278 Sum_probs=209.4
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHh
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (488)
++++||+|||||+||+++|..|++.|+ +|+|||+... . ... .... ....++++....+........+
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~-g-g~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGF---SVAILDKAVA-G-GLT------AEAP--LVENYLGFKSIVGSELAKLFAD 80 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSST-T-GGG------GGCS--CBCCBTTBSSBCHHHHHHHHHH
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCC-C-ccc------cccc--hhhhcCCCcccCHHHHHHHHHH
Confidence 345799999999999999999999987 7999998531 1 100 0000 0001111100000000112234
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC---CcEEEecCHHHHHHHHHh
Q 011322 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISS 203 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~ 203 (488)
++++.+++++. .+|+.++.+.+ +|.+ ++.++.||+||+|||+.+. .+.+++.+. .++++... ....
T Consensus 81 ~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~-~~~i~g~~~~~~~~~~~~~~------~~~~ 151 (319)
T 3cty_A 81 HAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK-HLGVKGESEYFGKGTSYCST------CDGY 151 (319)
T ss_dssp HHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESCHH------HHGG
T ss_pred HHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc-cCCCCChHHhCCceEEEEEe------cchh
Confidence 45667899887 68999987655 5655 5667999999999999876 444555321 34433221 1223
Q ss_pred hhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcE
Q 011322 204 LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 283 (488)
Q Consensus 204 ~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v 283 (488)
...+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.. ++. +.+.+++.||+++++++++++..+ ++++
T Consensus 152 ~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~~----l~~~l~~~gv~i~~~~~v~~i~~~-~~~v 223 (319)
T 3cty_A 152 LFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---ENA----YVQEIKKRNIPYIMNAQVTEIVGD-GKKV 223 (319)
T ss_dssp GGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CHH----HHHHHHHTTCCEECSEEEEEEEES-SSSE
T ss_pred hcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CHH----HHHHHhcCCcEEEcCCeEEEEecC-CceE
Confidence 45689999999999999999999999999999999887643 333 445566889999999999999864 3445
Q ss_pred EEEEeC---CCc--EEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCccccc
Q 011322 284 AAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 357 (488)
Q Consensus 284 ~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~ 357 (488)
..+.+. +|+ ++++|.||+|+|++|+.+++++.++..+ +|+|.||++++|+.|+|||+|||+..+.
T Consensus 224 ~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--------- 294 (319)
T 3cty_A 224 TGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNF--------- 294 (319)
T ss_dssp EEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC---------
T ss_pred EEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcch---------
Confidence 566664 675 6999999999999999999998888865 5889999999999999999999998632
Q ss_pred ccHHHHHHHHHHHHHHHhc
Q 011322 358 EHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 358 ~~~~~A~~~g~~~a~~i~~ 376 (488)
..+..|..+|+.+|.+|..
T Consensus 295 ~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 295 AQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 1466789999999998864
No 61
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4e-36 Score=288.89 Aligned_cols=278 Identities=21% Similarity=0.160 Sum_probs=204.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
++||+|||||+||+++|..|++.|+ +|+|||+++..... +.....+.. ..............+.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 66 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARK---NILLVDAGERRNRF-ASHSHGFLG-----------QDGKAPGEIIAEARRQI 66 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECCCCGGGG-CSCCCSSTT-----------CTTCCHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCccccc-chhhcCCcC-----------CCCCCHHHHHHHHHHHH
Confidence 4799999999999999999999987 89999987532110 111111110 00000000011123334
Q ss_pred HHC-CcEEEeCCcEEEEeCCC--cEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC---CcEEEecCHHHHHHHHHhh
Q 011322 131 KEK-GIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (488)
Q Consensus 131 ~~~-~v~~~~~~~v~~id~~~--~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~ 204 (488)
.+. +++++. ++|+.++++. ..+++.+++++.||+||+|||+.+. .|.+++... .++++.. ......
T Consensus 67 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~-~~~~~g~~~~~~~~~~~~~------~~~~~~ 138 (297)
T 3fbs_A 67 ERYPTIHWVE-GRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE-LPEIAGLRERWGSAVFHCP------YCHGYE 138 (297)
T ss_dssp TTCTTEEEEE-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE-CCCCBTTGGGBTTTEESCH------HHHTGG
T ss_pred HhcCCeEEEE-eEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC-CCCCCCchhhcCCeeEEcc------cCcchh
Confidence 444 688876 5899998765 4788888988999999999999876 455555432 2333221 112223
Q ss_pred hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEE
Q 011322 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (488)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~ 284 (488)
..+++++|||+|.+|+|+|..|.+.+ +|+++.+.+.. +.+ .+.+.+++.||+++. +++++++.+ +
T Consensus 139 ~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----~~~----~~~~~l~~~gv~i~~-~~v~~i~~~--~--- 203 (297)
T 3fbs_A 139 LDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----PDA----DQHALLAARGVRVET-TRIREIAGH--A--- 203 (297)
T ss_dssp GTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----CCH----HHHHHHHHTTCEEEC-SCEEEEETT--E---
T ss_pred hcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----CCH----HHHHHHHHCCcEEEc-ceeeeeecC--C---
Confidence 46899999999999999999999999 99999987752 232 456778899999996 889999743 2
Q ss_pred EEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCcccC---C-CEEeCCCCCCCCCCEEEEceecccCCccCCcccccccH
Q 011322 285 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSV---G-GIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 360 (488)
Q Consensus 285 ~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~---g-~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~ 360 (488)
.+.+++|+++++|.||+++|++|+.++++++++..++ | ++.||++++|+.|||||+|||+..+. .+
T Consensus 204 ~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~~----------~~ 273 (297)
T 3fbs_A 204 DVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPAG----------SV 273 (297)
T ss_dssp EEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTTC----------CH
T ss_pred eEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCchH----------HH
Confidence 6788999999999999999999999999999988653 4 79999999999999999999998633 46
Q ss_pred HHHHHHHHHHHHHHhc
Q 011322 361 DHARQSAQHCIKALLS 376 (488)
Q Consensus 361 ~~A~~~g~~~a~~i~~ 376 (488)
..|..+|+.+|.+|..
T Consensus 274 ~~A~~~g~~aa~~i~~ 289 (297)
T 3fbs_A 274 ALAVGDGAMAGAAAHR 289 (297)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHH
Confidence 6788889888888753
No 62
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=5.5e-36 Score=300.68 Aligned_cols=297 Identities=19% Similarity=0.201 Sum_probs=220.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
.+||||||||+||++||.+|++.+. +.+|||||+++.+.|. |.+. .+.... .....+ ....+.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~-~~~Vtlie~~~~~~~~-p~~~-~v~~g~-~~~~~~------------~~~~~~~ 65 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADP-SIEVTLIEPNETYYTC-YMSN-EVIGGD-RELASL------------RVGYDGL 65 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSCSSEECS-TTHH-HHHHTS-SCGGGG------------EECSHHH
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCc-CCeEEEEeCCCCCCCc-cCHH-HHhcCC-CCHHHH------------hhCHHHH
Confidence 4799999999999999999999885 6799999998875443 3322 122111 111111 2334566
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCC----CCcEEEecCHHHHHHHHHhhh-
Q 011322 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYIRDVADADALISSLE- 205 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~----~~~v~~~~~~~~~~~~~~~~~- 205 (488)
...+++++. .+|+.||++++++++.+|+++.||+||||||+.+. ++.++|.. ...++.+.+..+...+.+.+.
T Consensus 66 ~~~gv~~i~-~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~-~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (401)
T 3vrd_B 66 RAHGIQVVH-DSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLL-YDKIEGYSEALAAKLPHAWKAGEQTALLRRQLES 143 (401)
T ss_dssp HHTTCEEEC-SCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-GGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHH
T ss_pred HHCCCEEEE-eEEEEEEccCcEEEecccceeecceeeeccCCccc-cCCccCchhhcccCccceeccHHHHHHHHHHHHh
Confidence 788999987 58999999999999999999999999999999876 45555532 223455666677766665543
Q ss_pred --cCCeEEEECCc------H----HHHHHHHHHHhCC--CcEEEEecCCCCcc-cccCHHHHHHHHHHHHHcCcEEEcCC
Q 011322 206 --KAKKVVVVGGG------Y----IGMEVAAAAVGWK--LDTTIIFPENHLLQ-RLFTPSLAQRYEQLYQQNGVKFVKGA 270 (488)
Q Consensus 206 --~~~~vvVvG~G------~----~g~e~A~~l~~~g--~~vtlv~~~~~~~~-~~~~~~~~~~~~~~l~~~GV~v~~~~ 270 (488)
.+..+++.+++ . .+.+++..+.+.+ .+|++++..+.+.. ..+++.+.+.+.+.+++.||++++++
T Consensus 144 ~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~ 223 (401)
T 3vrd_B 144 MDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGP 223 (401)
T ss_dssp SCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTT
T ss_pred cccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCc
Confidence 33444444321 1 3456666666554 57899988887643 23566677777777889999999999
Q ss_pred eEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCC-CC-CCCCCEEEEceeccc-C
Q 011322 271 SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ-FR-TRMPGIFAIGDVAAF-P 347 (488)
Q Consensus 271 ~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~-~~-t~~~~Iya~GD~a~~-~ 347 (488)
++..++.+.+.. .+.+++|+++++|.+++++|.+|+ .+++++++..++|+|.||++ +| |++|||||+|||+.. |
T Consensus 224 ~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~~~~-~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~ 300 (401)
T 3vrd_B 224 DAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQRAG-KIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAP 300 (401)
T ss_dssp TTCEEEEETTTT--EEEETTSCEEECSEEEECCCEEEC-HHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTT
T ss_pred eEEEEEecccce--EEEcCCCcEEEeeEEEEecCcCCc-hhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCC
Confidence 999987654433 578999999999999999999998 78999999888899999986 55 689999999999864 2
Q ss_pred CccCCcccccccHHHHHHHHHHHHHHHhc
Q 011322 348 LKMYDRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 348 ~~~~~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
.+ .+...|..||+.+|+||++
T Consensus 301 ~p--------k~a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 301 MP--------KSAYSANSQAKVAAAAVVA 321 (401)
T ss_dssp SC--------BSHHHHHHHHHHHHHHHHH
T ss_pred CC--------chHHHHHHHHHHHHHHHHH
Confidence 22 2456689999999999864
No 63
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=2.4e-35 Score=296.71 Aligned_cols=288 Identities=20% Similarity=0.212 Sum_probs=221.8
Q ss_pred CeEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHh
Q 011322 52 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (488)
++|||||||+||+++|..|++ .|. +|+|||+++.+.|. |.+.. .........++ .....+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~---~V~vie~~~~~~~~-~~~~~--~~~~~~~~~~~-----------~~~~~~ 64 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKA---DVKVINKSRFSYFR-PALPH--VAIGVRDVDEL-----------KVDLSE 64 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGS---EEEEEESSSEEEEC-CSSCC--CCSSCCCCCCE-----------EEEHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEeCCCCceec-cchhh--cccCCcCHHHH-----------HHHHHH
Confidence 689999999999999999999 655 89999999876554 33321 11111111111 123456
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcE----EEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhh
Q 011322 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL----LKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~----i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 204 (488)
++++.+++++.+ +|+.++++.+.|++.+++. +.||+||+|||+.+. .+.++|.+. ....+.+..+...+.+.+
T Consensus 65 ~~~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~-~~~ipG~~~-~~~~~~~~~~~~~~~~~l 141 (409)
T 3h8l_A 65 ALPEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA-TELVKGWDK-YGYSVCEPEFATKLREKL 141 (409)
T ss_dssp HTGGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC-GGGSBTHHH-HCEESSSTTHHHHHHHHH
T ss_pred HHhhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC-ccCCCChhh-cCcCcCCHHHHHHHHHHH
Confidence 667789999986 9999999999999888764 999999999999776 344455321 345566667777766655
Q ss_pred hcC-CeEEEECCcH-------------------------HHHHHHH----HHHhCCC----cEEEEecCCCCcccccCHH
Q 011322 205 EKA-KKVVVVGGGY-------------------------IGMEVAA----AAVGWKL----DTTIIFPENHLLQRLFTPS 250 (488)
Q Consensus 205 ~~~-~~vvVvG~G~-------------------------~g~e~A~----~l~~~g~----~vtlv~~~~~~~~~~~~~~ 250 (488)
... ++++|||+|. .++|+|. .+.+.|. +|+++++.+ +++ .+++.
T Consensus 142 ~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~-~~~~~ 219 (409)
T 3h8l_A 142 ESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLS-DLSPN 219 (409)
T ss_dssp HHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SST-TBCHH
T ss_pred HHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-ccc-ccCHH
Confidence 443 6778999992 4677774 5566774 899999988 665 37889
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhc--CCcccCCCEEeCC
Q 011322 251 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV--GLNSSVGGIQVDG 328 (488)
Q Consensus 251 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~--gl~~~~g~i~vd~ 328 (488)
+.+.+.+.+++.||+++++++|++++.+ .+++++|+++++|.||+++|++|+ .+++++ ++..++|++.||+
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~------~v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l~~~~G~i~vd~ 292 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIREH------EIVDEKGNTIPADITILLPPYTGN-PALKNSTPDLVDDGGFIPTDL 292 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECSS------EEEETTSCEEECSEEEEECCEECC-HHHHTSCGGGSCTTSCBCBBT
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECCC------eEEECCCCEEeeeEEEECCCCCcc-HHHHhccccCcCCCCCEEeCc
Confidence 9999999999999999999999999743 478899999999999999999998 678877 5544567899999
Q ss_pred CCCC-CCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011322 329 QFRT-RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 329 ~~~t-~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
++|| ++|||||+|||+..+.+. ....|..||+.+|+||.+
T Consensus 293 ~~~~~~~~~vfa~GD~~~~~~~~--------~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 293 NMVSIKYDNVYAVGDANSMTVPK--------LGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp TSBBSSCTTEEECGGGBTTCCSC--------CHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEeehhccCCCCc--------HHHHHHHHHHHHHHHHHH
Confidence 9999 899999999999864322 456689999999999975
No 64
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=2.2e-36 Score=293.38 Aligned_cols=299 Identities=19% Similarity=0.218 Sum_probs=202.7
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccc-cCCCCCCCCH
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTP 127 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 127 (488)
++.+||+||||||||++||.+|++.|+ +|+|||++...... + .+.+.. .....++++++.. .+.+...+..
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~---~v~liE~~~~gg~~-~---~G~~~~-~~~i~~~~g~~~~i~~~~l~~~~~ 73 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSL---KPVMYEGFMAGGVA-A---GGQLTT-TTIIENFPGFPNGIDGNELMMNMR 73 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSGGGCC-T---TCGGGG-SSEECCSTTCTTCEEHHHHHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCCcc-c---CCCcCC-hHHhhhccCCcccCCHHHHHHHHH
Confidence 346899999999999999999999987 79999987532110 0 011110 1111122222211 0111112234
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCC--cEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhh
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE 205 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~--~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~ 205 (488)
+..++.++++... .+....... +.+.+.++.++.||+||||||+.|+ .|++||.+.............+. .....
T Consensus 74 ~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~-~~~ipG~~~~~~~~~~~~~~~~~-~~~~~ 150 (314)
T 4a5l_A 74 TQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAK-RMHVPGEDKYWQNGVSACAICDG-AVPIF 150 (314)
T ss_dssp HHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEEC-CCCCTTHHHHBTTTEESCHHHHT-TSGGG
T ss_pred HHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEccccccc-ccCCCccccccccceeeehhhhh-hhhhc
Confidence 4556778888764 666665543 4677788889999999999999886 45555543222111222122222 22234
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 285 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~ 285 (488)
.+++++|||+|++|+|+|..|.++|.+||++++.+.... .+. ...+.+...+++.+....+.++... +.....
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~ 223 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKT---MQERVLNHPKIEVIWNSELVELEGD-GDLLNG 223 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEES-SSSEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cch---hhhhhhcccceeeEeeeeeEEEEee-eeccce
Confidence 679999999999999999999999999999998876543 222 2334556678999999888888754 233333
Q ss_pred EEe-----CCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccH
Q 011322 286 VKL-----EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 360 (488)
Q Consensus 286 v~~-----~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~ 360 (488)
+.+ .+++++++|.|++++|++|++++++.. +..++++++||+++|||+|||||+|||+..+.. .+
T Consensus 224 ~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~-~~~~~~G~iv~~~~~Ts~pgIyA~GDv~~~~~~---------~~ 293 (314)
T 4a5l_A 224 AKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQ-VKTADDGYILTEGPKTSVDGVFACGDVCDRVYR---------QA 293 (314)
T ss_dssp EEEEETTTCCEEEEECSEEEECSCEEESCGGGTTS-SCBCTTSCBCCBTTBCSSTTEEECSTTTCSSCC---------CH
T ss_pred eEEeecccccceeeccccceEecccccChhHhccc-ceEcCCeeEeCCCCccCCCCEEEEEeccCCcch---------HH
Confidence 332 345689999999999999999988654 445555677999999999999999999986542 23
Q ss_pred HHHHHHHHHHHHHHh
Q 011322 361 DHARQSAQHCIKALL 375 (488)
Q Consensus 361 ~~A~~~g~~~a~~i~ 375 (488)
..|..+|+.||.++.
T Consensus 294 ~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 294 IVAAGSGCMAALSCE 308 (314)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 457778888887764
No 65
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.2e-35 Score=287.60 Aligned_cols=285 Identities=22% Similarity=0.297 Sum_probs=207.1
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-CCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
+||+|||||+||+++|..|++.|+ +|+|||+...-.+ ..+... .+................+++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~---~v~li~~~~gG~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 66 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGI---RTGLMGERFGGQILDTVDIE------------NYISVPKTEGQKLAGALKVHV 66 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSTTGGGGGCCEEC------------CBTTBSSEEHHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCceeccccccc------------cccCcCCCCHHHHHHHHHHHH
Confidence 689999999999999999999887 8999986421000 000000 000000000000011233455
Q ss_pred HHCCcEEEeCCcEEEEeCC-----CcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCC---CCcEEEecCHHHHHHHHH
Q 011322 131 KEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALIS 202 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~-----~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~ 202 (488)
++.+++++.+++|+.++++ ...+.+++|+++.||+||+|||+.+. .|.+++.+ ..++++. ..+..
T Consensus 67 ~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~-~~~~~g~~~~~~~~~~~~------~~~~~ 139 (310)
T 1fl2_A 67 DEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR-NMNVPGEDQYRTKGVTYC------PHCDG 139 (310)
T ss_dssp HTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC-CCCCTTTTTTBTTTEESC------HHHHG
T ss_pred HHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC-CCCCCChhhcccceeEEe------ccCcH
Confidence 6779999998899999865 35788888888999999999999875 34455532 1233322 22233
Q ss_pred hhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHH-cCcEEEcCCeEEEEEeCCCC
Q 011322 203 SLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDG 281 (488)
Q Consensus 203 ~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~~ 281 (488)
....+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+. +++ .+.+.+++ .||+++++++++++..+ ++
T Consensus 140 ~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~----~~~~~l~~~~gv~v~~~~~v~~i~~~-~~ 211 (310)
T 1fl2_A 140 PLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---ADQ----VLQDKLRSLKNVDIILNAQTTEVKGD-GS 211 (310)
T ss_dssp GGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SCH----HHHHHHHTCTTEEEESSEEEEEEEES-SS
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---ccH----HHHHHHhhCCCeEEecCCceEEEEcC-CC
Confidence 44578999999999999999999999999999999998773 343 34455666 69999999999999854 45
Q ss_pred cEEEEEeCC---Cc--EEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCccc
Q 011322 282 RVAAVKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 355 (488)
Q Consensus 282 ~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~ 355 (488)
++..+.+.+ |+ ++++|.||+|+|++|+.+++++. +..+ +|+|.||++++|+.|+|||+|||+..+..
T Consensus 212 ~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~------ 284 (310)
T 1fl2_A 212 KVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYK------ 284 (310)
T ss_dssp SEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSSC------
T ss_pred cEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCccCCCCEEEeecccCCcch------
Confidence 555666653 53 68999999999999999888764 6554 68899999999999999999999986532
Q ss_pred ccccHHHHHHHHHHHHHHHhc
Q 011322 356 RVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 356 ~~~~~~~A~~~g~~~a~~i~~ 376 (488)
.+..|..+|+.+|.+|..
T Consensus 285 ---~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 285 ---QIIIATGEGAKASLSAFD 302 (310)
T ss_dssp ---CHHHHHHHHHHHHHHHHH
T ss_pred ---hhhhhHhhHHHHHHHHHH
Confidence 455688889988888864
No 66
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=7.6e-36 Score=302.66 Aligned_cols=304 Identities=18% Similarity=0.185 Sum_probs=221.5
Q ss_pred CCeEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 51 NREFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
+++|||||||+||+++|..|++ .+. +|+|||+++.+.|. |.+.. +... .....++ .....
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~---~Vtlie~~~~~~~~-~~~~~-~~~g-~~~~~~~-----------~~~l~ 66 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGH---EVTLISANDYFQFV-PSNPW-VGVG-WKERDDI-----------AFPIR 66 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGS---EEEEECSSSEEECG-GGHHH-HHHT-SSCHHHH-----------EEECH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcC---EEEEEeCCCCCccc-CCccc-cccC-ccCHHHH-----------HHHHH
Confidence 5799999999999999999999 555 89999999876664 32211 1110 0000011 13456
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC--CcEEEecCHHHHHHHHHhhh
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL--PGVHYIRDVADADALISSLE 205 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~ 205 (488)
+++++.+++++. ++|+.++++.++|++++++++.||+||+|||+.+. .+.++|... .....+.+..++..+.+.+.
T Consensus 67 ~~~~~~gv~~~~-~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~-~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~ 144 (437)
T 3sx6_A 67 HYVERKGIHFIA-QSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLA-FENVPGSDPHEGPVQSICTVDHAERAFAEYQ 144 (437)
T ss_dssp HHHHTTTCEEEC-SCEEEEETTTTEEEETTSCEEECSEEEECCCCEEC-GGGSTTCSTTTSSEECCSSHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEE-eEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcC-cccCCCCCcccCcceecccccHHHHHHHHHH
Confidence 778889999986 69999999999999999999999999999999876 455666543 24556667777766654332
Q ss_pred ---cCCeEEEECCcHH----H--HHHH----HHHHhCCCc-----EEEEecCCCCccccc--CHHHHHHHHHHHHHcCcE
Q 011322 206 ---KAKKVVVVGGGYI----G--MEVA----AAAVGWKLD-----TTIIFPENHLLQRLF--TPSLAQRYEQLYQQNGVK 265 (488)
Q Consensus 206 ---~~~~vvVvG~G~~----g--~e~A----~~l~~~g~~-----vtlv~~~~~~~~~~~--~~~~~~~~~~~l~~~GV~ 265 (488)
..++++|||+|.. | +|+| ..+.+.|.+ |+++++.+.+....+ .++....+.+.+++.||+
T Consensus 145 ~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~ 224 (437)
T 3sx6_A 145 ALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIE 224 (437)
T ss_dssp HHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCE
T ss_pred HHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCE
Confidence 3556788888554 4 7777 556677764 999999987743211 135788899999999999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEeCC-----CcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCC-CCCCEEE
Q 011322 266 FVKGASIKNLEAGSDGRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRT-RMPGIFA 339 (488)
Q Consensus 266 v~~~~~v~~i~~~~~~~v~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t-~~~~Iya 339 (488)
+++++.+++++.+ +........+ ++++++|.+++++|++++..+.+..++..++|+|.||+++|| ++|||||
T Consensus 225 ~~~~~~v~~v~~~--~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa 302 (437)
T 3sx6_A 225 AYTNCKVTKVEDN--KMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFA 302 (437)
T ss_dssp EECSEEEEEEETT--EEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEE
T ss_pred EEcCCEEEEEECC--eEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCEEE
Confidence 9999999999732 2111111223 567999999999999988555444677666788999999999 9999999
Q ss_pred EceecccCCccCCcc---cccccHHHHHHHHHHHHHHHhc
Q 011322 340 IGDVAAFPLKMYDRT---ARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 340 ~GD~a~~~~~~~~~~---~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
+|||+..+... +.. ....+...|..||+.+|+||..
T Consensus 303 ~GD~~~~~~~~-~~~~~~~~pk~~~~A~~qg~~aA~ni~~ 341 (437)
T 3sx6_A 303 AGIAIAIPPVE-TTPVPTGAPKTGYMIESMVSAAVHNIKA 341 (437)
T ss_dssp CGGGBCCCCSC-CCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCcC-CCcCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999876421 110 1123567799999999999975
No 67
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=3.5e-35 Score=286.39 Aligned_cols=288 Identities=20% Similarity=0.270 Sum_probs=207.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCccc-ccCCCCCCCCHh
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPE 128 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 128 (488)
+++||+|||||+||+++|..|++.|+ +|+|||++. .... ..... .+ ..++++.. ...........+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~-~gg~-~~~~~-~~-------~~~~~~~~~~~~~~~~~~l~~ 73 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQL---STLILEKGM-PGGQ-IAWSE-EV-------ENFPGFPEPIAGMELAQRMHQ 73 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTGG-GGGCS-CB-------CCSTTCSSCBCHHHHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCC---cEEEEeCCC-CCcc-ccccc-cc-------ccCCCCCCCCCHHHHHHHHHH
Confidence 45799999999999999999999987 899999983 1110 00000 00 00111100 000000112344
Q ss_pred HHHHCCcEEEeCCcEEEEeCC--C---cEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC---CcEEEecCHHHHHHH
Q 011322 129 WYKEKGIEMIYQDPVTSIDIE--K---QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 200 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~--~---~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~ 200 (488)
++++.+++++. .+|+.++.+ + .++.+.+|+++.||+||+|||+.+. .|.+++.+. .++++.. ..
T Consensus 74 ~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~-~~~i~g~~~~~~~~~~~~~------~~ 145 (325)
T 2q7v_A 74 QAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR-KLGIPGEDNFWGKGVSTCA------TC 145 (325)
T ss_dssp HHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC-CCCCTTTTTTBTTTEESCH------HH
T ss_pred HHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC-CCCCCChhhccCceEEEec------cC
Confidence 56678999987 589999876 3 4677788888999999999999875 455555321 2333321 12
Q ss_pred HHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCC
Q 011322 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 280 (488)
Q Consensus 201 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~ 280 (488)
......+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.. ++.+ ..+.+++.||+++++++++++..+
T Consensus 146 ~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~---~~~l~~~~gv~i~~~~~v~~i~~~-- 217 (325)
T 2q7v_A 146 DGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVA---QARAFANPKMKFIWDTAVEEIQGA-- 217 (325)
T ss_dssp HGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEES--
T ss_pred CHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHH---HHHHHhcCCceEecCCceEEEccC--
Confidence 22345679999999999999999999999999999999887643 3332 223334469999999999999853
Q ss_pred CcEEEEEeC---CCc--EEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcc
Q 011322 281 GRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 354 (488)
Q Consensus 281 ~~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~ 354 (488)
+.+..|.+. +|+ ++++|.||+|+|++|+.+++++. +..+ +|+|.||++++|+.|+|||+|||+..+.
T Consensus 218 ~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~------ 290 (325)
T 2q7v_A 218 DSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY------ 290 (325)
T ss_dssp SSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC------
T ss_pred CcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCccCCCCEEEeecccCccH------
Confidence 445566665 675 79999999999999999998876 6654 6889999999999999999999998631
Q ss_pred cccccHHHHHHHHHHHHHHHhc
Q 011322 355 ARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 355 ~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
..+..|..||+.+|.+|..
T Consensus 291 ---~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 291 ---RQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp ---CCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHH
Confidence 1566788999999998864
No 68
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1e-35 Score=289.36 Aligned_cols=292 Identities=18% Similarity=0.252 Sum_probs=211.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccc-cCCCCCCCCHh
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTPE 128 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 128 (488)
+++||+|||||+||+++|..|++.|+ +|+|+|+... ... +..... ...++++... ...........
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~-gg~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 70 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANL---QPVLITGMEK-GGQ-------LTTTTE--VENWPGDPNDLTGPLLMERMHE 70 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTC---CCEEECCSST-TGG-------GGGCSB--CCCSTTCCSSCBHHHHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEccCCC-Cce-------Eecchh--hhhCCCCCCCCCHHHHHHHHHH
Confidence 45799999999999999999999987 7999996421 100 000000 0011111100 00000112234
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEE-eCCCcEEEeccEEecCCCCCCcCCCCcCCC---CCcEEEecCHHHHHHHHHhh
Q 011322 129 WYKEKGIEMIYQDPVTSIDIEKQTLI-TNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALISSL 204 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~~~~v~-~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~~~ 204 (488)
++++.+++++.+ .|+.++.+.+.++ +.++.++.||+||+|||+.+. .|.+++.. ..++++.. .....+
T Consensus 71 ~~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~-~~~~~g~~~~~~~~~~~~~------~~~~~~ 142 (320)
T 1trb_A 71 HATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGASAR-YLGLPSEEAFKGRGVSACA------TSDGFF 142 (320)
T ss_dssp HHHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEEC-CCCCHHHHHTBTTTEESCH------HHHGGG
T ss_pred HHHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcC-CCCCCChHHhCCceeEecc------cCCccc
Confidence 566789999987 5999998765433 567788999999999999875 34444421 12333221 222334
Q ss_pred hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEE
Q 011322 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (488)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~ 284 (488)
..+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.. ++.+.+.+.+.+++.||++++++++++++.+ ++.+.
T Consensus 143 ~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~ 218 (320)
T 1trb_A 143 YRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA---EKILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVT 218 (320)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC---CHHHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc---CHHHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceE
Confidence 5789999999999999999999999999999999887653 6778888888899999999999999999864 34565
Q ss_pred EEEeCC----C--cEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCC-----CCCCCCEEEEceecccCCccCCc
Q 011322 285 AVKLED----G--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQF-----RTRMPGIFAIGDVAAFPLKMYDR 353 (488)
Q Consensus 285 ~v~~~~----g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~-----~t~~~~Iya~GD~a~~~~~~~~~ 353 (488)
.|.+.+ | +++++|.||+|+|++|+.++++ .++..++|++.||+++ +|+.|+|||+|||+..+..
T Consensus 219 ~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~---- 293 (320)
T 1trb_A 219 GVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYR---- 293 (320)
T ss_dssp EEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT-TTSCEETTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSC----
T ss_pred EEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc-ccccccCceEEECCCcccccccCCCCCEEEcccccCCcch----
Confidence 677654 4 5799999999999999988876 4566557889999987 7899999999999986421
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 011322 354 TARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 354 ~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
.+..|..+|+.+|.+|..
T Consensus 294 -----~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 294 -----QAITSAGTGCMAALDAER 311 (320)
T ss_dssp -----CHHHHHHHHHHHHHHHHH
T ss_pred -----hhhhhhccHHHHHHHHHH
Confidence 455688888888888753
No 69
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=6.2e-36 Score=293.06 Aligned_cols=295 Identities=18% Similarity=0.248 Sum_probs=208.6
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCccc-ccCCCCCCCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQT 126 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 126 (488)
..+++||+|||||+||+++|..|++.|+ +|+|||+++..... +. +.+... .....++++.. ..........
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~vie~~~~~~~~-~g---g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEI---KPILYEGMMANGIA-AG---GQLTTT-TEIENFPGFPDGLTGSELMDRM 90 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSBTTBC-TT---CGGGGS-SEECCSTTCTTCEEHHHHHHHH
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCCCCCCC-cC---cccccc-hhhcccCCCcccCCHHHHHHHH
Confidence 3456899999999999999999999987 79999997521110 10 111100 00011111111 0000111223
Q ss_pred HhHHHHCCcEEEeCCcEEEEeCCCcEEEe-----CCCcEEEeccEEecCCCCCCcCCCCcCCC---CCcEEEecCHHHHH
Q 011322 127 PEWYKEKGIEMIYQDPVTSIDIEKQTLIT-----NSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADAD 198 (488)
Q Consensus 127 ~~~~~~~~v~~~~~~~v~~id~~~~~v~~-----~~g~~i~yd~lVlAtG~~~~~~~~~~g~~---~~~v~~~~~~~~~~ 198 (488)
.+++++.+++++.++ |++++.+.+.+.+ .++..+.||+||+|||+.+. .+.+++.. ..++.+. .
T Consensus 91 ~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~-~~~~~g~~~~~~~~~~~~------~ 162 (338)
T 3itj_A 91 REQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK-RMHLPGEETYWQKGISAC------A 162 (338)
T ss_dssp HHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC-CCCCTTHHHHBTTTEESC------H
T ss_pred HHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC-CCCCCCchhccCccEEEc------h
Confidence 456677899999976 9999988765444 46678999999999999875 44444421 1222222 2
Q ss_pred HHHHh--hhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHc-CcEEEcCCeEEEE
Q 011322 199 ALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN-GVKFVKGASIKNL 275 (488)
Q Consensus 199 ~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~-GV~v~~~~~v~~i 275 (488)
..... ...+++++|||+|.+|+|+|..|.+.+.+|+++++.+.++. ...+.+.+.+. ||++++++.++++
T Consensus 163 ~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~~~gv~i~~~~~v~~i 235 (338)
T 3itj_A 163 VCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEKNEKIEILYNTVALEA 235 (338)
T ss_dssp HHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHHCTTEEEECSEEEEEE
T ss_pred hcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHhcCCeEEeecceeEEE
Confidence 22222 34689999999999999999999999999999999987765 22344555555 9999999999999
Q ss_pred EeCCCCcEEEEEeCC-----CcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEe-CCCCCCCCCCEEEEceecccCC
Q 011322 276 EAGSDGRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQV-DGQFRTRMPGIFAIGDVAAFPL 348 (488)
Q Consensus 276 ~~~~~~~v~~v~~~~-----g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~v-d~~~~t~~~~Iya~GD~a~~~~ 348 (488)
+.+ ++.+..|.+.+ ++++++|.||+|+|++|+..+++. ++..+ +|++.| |++++|+.|||||+|||+..+.
T Consensus 236 ~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~ 313 (338)
T 3itj_A 236 KGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKY 313 (338)
T ss_dssp EES-SSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSC
T ss_pred Ecc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCc
Confidence 865 44555677765 467999999999999999988876 77765 677874 8899999999999999998432
Q ss_pred ccCCcccccccHHHHHHHHHHHHHHHhc
Q 011322 349 KMYDRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 349 ~~~~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
..+..|..+|+.+|.+|..
T Consensus 314 ---------~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 314 ---------RQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHH
T ss_pred ---------cceeeehhhhHHHHHHHHH
Confidence 2456788899999988864
No 70
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=4.9e-35 Score=283.73 Aligned_cols=289 Identities=21% Similarity=0.221 Sum_probs=206.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEE-EcCCCCCCCCCCCCCccccCCCCCCCCCCCCcc-cccCCCCCCCCH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCI-VSKEAYAPYERPALTKGYLFPLDKKPARLPGFH-TCVGSGGERQTP 127 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~l-ie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 127 (488)
.++||+|||||+||++||..|++.|+ +|+| +|++. .... +... .....++++. ............
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~li~e~~~-~gG~-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 69 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGL---KNVVMFEKGM-PGGQ-------ITSS--SEIENYPGVAQVMDGISFMAPWS 69 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTC---SCEEEECSSS-TTGG-------GGGC--SCBCCSTTCCSCBCHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC---CeEEEEeCCC-CCce-------eeee--ceeccCCCCCCCCCHHHHHHHHH
Confidence 46899999999999999999999987 7999 99842 2110 0000 0000111111 000000112233
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCC----cEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC---CcEEEecCHHHHHHH
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEK----QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 200 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~----~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~ 200 (488)
+++++.+++++.+ +|..+ .+. ..+.+..+.++.||+||+|||+.+. .|.+++... .++++. ...
T Consensus 70 ~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~-~~~~~g~~~~~~~~~~~~------~~~ 140 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK-KAGFKGEDEFFGKGVSTC------ATC 140 (315)
T ss_dssp HHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESC------HHH
T ss_pred HHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCCC-CCCCCChhhcCCCeEEee------ecc
Confidence 4556679999986 89888 444 3421433228999999999999775 455566443 333332 222
Q ss_pred HHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCC
Q 011322 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 280 (488)
Q Consensus 201 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~ 280 (488)
......+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.. ++. .+.+.+++.||++++++.+++++.+ +
T Consensus 141 ~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~~~~v~~i~~~-~ 213 (315)
T 3r9u_A 141 DGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA---APS---TVEKVKKNEKIELITSASVDEVYGD-K 213 (315)
T ss_dssp HGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS---CHH---HHHHHHHCTTEEEECSCEEEEEEEE-T
T ss_pred cccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC---CHH---HHHHHHhcCCeEEEeCcEEEEEEcC-C
Confidence 33345789999999999999999999999999999999987742 333 3445567889999999999999854 4
Q ss_pred CcEEEEEeC--CCc--EEEcCEEEEeecCcCCChhhHh---cC-Cccc-CCCEEeCCCCCCCCCCEEEEceecccCCccC
Q 011322 281 GRVAAVKLE--DGS--TIDADTIVIGIGAKPTVSPFER---VG-LNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY 351 (488)
Q Consensus 281 ~~v~~v~~~--~g~--~i~~D~vi~a~G~~p~~~~~~~---~g-l~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~ 351 (488)
+.+..+.+. +|+ ++++|.||+|+|++|+..+++. +| +..+ +|+|.||++++|+.|||||+|||+..+.
T Consensus 214 ~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~--- 290 (315)
T 3r9u_A 214 MGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAP--- 290 (315)
T ss_dssp TEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCC---
T ss_pred CcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCch---
Confidence 455556665 786 7999999999999999988766 54 7765 5889999999999999999999996432
Q ss_pred CcccccccHHHHHHHHHHHHHHHhc
Q 011322 352 DRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 352 ~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
..+..|..+|+.+|.+|..
T Consensus 291 ------~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 291 ------KQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp ------CCHHHHHHHHHHHHHHHHH
T ss_pred ------hhhhhHHhhHHHHHHHHHH
Confidence 2566788999999998863
No 71
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=5.8e-35 Score=282.93 Aligned_cols=288 Identities=18% Similarity=0.226 Sum_probs=207.6
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCccc-ccCCCCCCCCHhHH
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPEWY 130 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 130 (488)
+||+|||||+||+++|..|++.|+. +|+|||++..... +.... ....++++.. ...........+++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~--~v~lie~~~~gg~--------~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~ 69 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVK--NAVLFEKGMPGGQ--------ITGSS--EIENYPGVKEVVSGLDFMQPWQEQC 69 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCS--SEEEECSSSTTCG--------GGGCS--CBCCSTTCCSCBCHHHHHHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCC--cEEEEcCCCCCcc--------ccccc--ccccCCCCcccCCHHHHHHHHHHHH
Confidence 6899999999999999999998762 7999998632110 00000 0000111100 00000011223445
Q ss_pred HHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC---CcEEEecCHHHHHHHHHhhh
Q 011322 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSLE 205 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~~ 205 (488)
++.+++++. ++|+.++.+.+ ++++.+++++.||+||+|||+.+. .|.+++... ++++++. .......
T Consensus 70 ~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~-~~~~~g~~~~~~~~~~~~~------~~~~~~~ 141 (311)
T 2q0l_A 70 FRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK-RTGIKGESEYWGKGVSTCA------TCDGFFY 141 (311)
T ss_dssp HTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC-CCCCBTHHHHBTTTEESCH------HHHGGGG
T ss_pred HHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC-CCCCCChhhccCCcEEEee------cCChhhc
Confidence 667999988 78999987766 677788888999999999998875 454444211 3344332 1222345
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHH-HcCcEEEcCCeEEEEEeCCCCcEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ-QNGVKFVKGASIKNLEAGSDGRVA 284 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~-~~GV~v~~~~~v~~i~~~~~~~v~ 284 (488)
.+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+. .++. +.+.+. +.||++++++.+++++.+ ++.+.
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~----~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~ 213 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---CAPI----TLEHAKNNDKIEFLTPYVVEEIKGD-ASGVS 213 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SCHH----HHHHHHTCTTEEEETTEEEEEEEEE-TTEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CCHH----HHHHHhhCCCeEEEeCCEEEEEECC-CCcEe
Confidence 67999999999999999999999999999999988764 2443 333444 479999999999999854 34444
Q ss_pred EEEeC---CCc--EEEcCEEEEeecCcCCChhhHhcC----Cccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcc
Q 011322 285 AVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVG----LNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 354 (488)
Q Consensus 285 ~v~~~---~g~--~i~~D~vi~a~G~~p~~~~~~~~g----l~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~ 354 (488)
.+.++ +|+ ++++|.||+|+|++|+.++++..+ +..+ +|+|.||++++|+.|+|||+|||+..+.
T Consensus 214 ~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~------ 287 (311)
T 2q0l_A 214 SLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP------ 287 (311)
T ss_dssp EEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC------
T ss_pred EEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch------
Confidence 56665 675 799999999999999999988775 7654 6889999999999999999999998631
Q ss_pred cccccHHHHHHHHHHHHHHHhc
Q 011322 355 ARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 355 ~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
..+..|..||+.+|.+|..
T Consensus 288 ---~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 288 ---KQVVCAASDGATAALSVIS 306 (311)
T ss_dssp ---CCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhHHHHHHHHHH
Confidence 1567799999999999864
No 72
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=1.2e-35 Score=286.83 Aligned_cols=285 Identities=14% Similarity=0.130 Sum_probs=195.5
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
.|+++||+||||||||++||.+|++.|+ +|+|||++..-..- .....++... ++.. ..+......
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~---~v~lie~~~~gg~~-~~~~~~~~~~--------~~~~---~~~~~~~~~ 67 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARK---QIALFDNNTNRNRV-TQNSHGFITR--------DGIK---PEEFKEIGL 67 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCGGGG-SSCBCCSTTC--------TTBC---HHHHHHHHH
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCCee-eeecCCccCC--------CCCC---HHHHHHHHH
Confidence 4677999999999999999999999987 89999987421100 0000001000 0000 000000111
Q ss_pred hHHHHC-CcEEEeCCcEEEEeCC---CcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC---CcEEEecCHHHHHHH
Q 011322 128 EWYKEK-GIEMIYQDPVTSIDIE---KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 200 (488)
Q Consensus 128 ~~~~~~-~v~~~~~~~v~~id~~---~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~ 200 (488)
+...++ .+.+.. ..+..++.. .+++.+.+|+++.||+||||||+.|. .|+++|.+. .++++ +...
T Consensus 68 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~-~p~i~G~~~~~~~~v~~------~~~~ 139 (304)
T 4fk1_A 68 NEVMKYPSVHYYE-KTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE-FPSIPNVREYYGKSLFS------CPYC 139 (304)
T ss_dssp HHHTTSTTEEEEE-CCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE-CCSCTTHHHHBTTTEES------CHHH
T ss_pred HHHHhcCCEEEEe-eEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc-cccccCccccccceeee------cccc
Confidence 222233 345554 456555432 35788899999999999999999886 455555321 12222 2223
Q ss_pred HHhhhcCCeEEEECCcH-HHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCC
Q 011322 201 ISSLEKAKKVVVVGGGY-IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 279 (488)
Q Consensus 201 ~~~~~~~~~vvVvG~G~-~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~ 279 (488)
......+++++|||||. .+.|+|..+...+.+|+++.+.+.+.. .+.+.+++.|++++.+. ++.+.. +
T Consensus 140 ~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~~---------~~~~~l~~~g~~~~~~~-v~~~~~-~ 208 (304)
T 4fk1_A 140 DGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELSQ---------TIMDELSNKNIPVITES-IRTLQG-E 208 (304)
T ss_dssp HSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCCH---------HHHHHHHTTTCCEECSC-EEEEES-G
T ss_pred chhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccchh---------hhhhhhhccceeEeeee-EEEeec-C
Confidence 33345677888888776 467899999899999999988765432 34566888999999874 777763 3
Q ss_pred CCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccc
Q 011322 280 DGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVE 358 (488)
Q Consensus 280 ~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~ 358 (488)
++.+..+.+++|+++++|.+++++|.+|+..+++++|++.+ +|+|.||+++|||+|||||+|||+..+..
T Consensus 209 ~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~~--------- 279 (304)
T 4fk1_A 209 GGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPS--------- 279 (304)
T ss_dssp GGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSCC---------
T ss_pred CCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcch---------
Confidence 56666899999999999999998888888889999999876 56799999999999999999999975432
Q ss_pred cHHHHHHHHHHHHHHHh
Q 011322 359 HVDHARQSAQHCIKALL 375 (488)
Q Consensus 359 ~~~~A~~~g~~~a~~i~ 375 (488)
.+..|..+|+.||.+|.
T Consensus 280 ~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 280 SLIIAASQGNKAAIAIN 296 (304)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34567788888887764
No 73
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.8e-34 Score=282.21 Aligned_cols=300 Identities=19% Similarity=0.234 Sum_probs=203.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCccc-ccCCCCCCCCHh
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPE 128 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 128 (488)
++++|+|||||++|+++|..|++.|+ +|+|||+...... .....+.... ....++.+.. .........+.+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~---~v~lie~~~~~~~---~~gg~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~ 78 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAEL---KPLLFEGWMANDI---APGGQLTTTT--DVENFPGFPEGILGVELTDKFRK 78 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSBTTB---CTTCGGGGCS--EECCSTTCTTCEEHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeccCcccc---CCCceeeecc--ccccCCCCccCCCHHHHHHHHHH
Confidence 45799999999999999999999987 8999998210000 0000011000 0001111110 000001112334
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCC-CcEEEecCHHHHHHHHHhh-
Q 011322 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL-PGVHYIRDVADADALISSL- 204 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~-~~v~~~~~~~~~~~~~~~~- 204 (488)
++++.+++++.++ |+.++.+.+ +|++ ++.++.||+||+|||+.+. .+.+++... .+.+..+.+..........
T Consensus 79 ~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 155 (333)
T 1vdc_A 79 QSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK-RLSFVGSGEVLGGFWNRGISACAVCDGAAP 155 (333)
T ss_dssp HHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC-CCCCBTCSSSSSCCBTTTEESCHHHHTTSG
T ss_pred HHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC-CCCCCCccccccccccCcEEEeccCccchh
Confidence 5567899999875 889987655 6666 7778999999999999876 344555432 1111111111111222222
Q ss_pred -hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCC-c
Q 011322 205 -EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG-R 282 (488)
Q Consensus 205 -~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~-~ 282 (488)
..+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.. .+.+ ..+.+++.||++++++++++++.++++ .
T Consensus 156 ~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~---~~~~~~~~gv~i~~~~~v~~i~~~~~~~~ 229 (333)
T 1vdc_A 156 IFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIM---QQRALSNPKIDVIWNSSVVEAYGDGERDV 229 (333)
T ss_dssp GGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEESSSSSS
T ss_pred hcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHH---HHHHHhCCCeeEecCCceEEEeCCCCccc
Confidence 5689999999999999999999999999999999987643 2222 224456789999999999999864321 5
Q ss_pred EEEEEeC---CC--cEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCC-CCCCCCCEEEEceecccCCccCCccc
Q 011322 283 VAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKMYDRTA 355 (488)
Q Consensus 283 v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~-~~t~~~~Iya~GD~a~~~~~~~~~~~ 355 (488)
+..+.+. +| +++++|.||+|+|++|+.++++ .++..+ +|+|.||++ ++|+.|+|||+|||+..+..
T Consensus 230 v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~------ 302 (333)
T 1vdc_A 230 LGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYR------ 302 (333)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCC------
T ss_pred eeeEEEEecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCCCEEechhhcccCCCCEEEeeeccCCCch------
Confidence 5456664 45 5799999999999999998876 467655 688999997 68999999999999986421
Q ss_pred ccccHHHHHHHHHHHHHHHhc
Q 011322 356 RVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 356 ~~~~~~~A~~~g~~~a~~i~~ 376 (488)
.+..|..+|+.+|.+|..
T Consensus 303 ---~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 303 ---QAITAAGTGCMAALDAEH 320 (333)
T ss_dssp ---CHHHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHhHHHHHHHHHH
Confidence 455688888888888753
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.2e-34 Score=283.95 Aligned_cols=300 Identities=16% Similarity=0.225 Sum_probs=196.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccC-------CCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVG-------SGGE 123 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 123 (488)
+++|+|||||++|+++|..|++.|+ +|+|||+++.......................++++..... ....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~---~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGL---SYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVL 79 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSC---CEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHH
Confidence 5799999999999999999999987 89999998753210000000000000000000111100000 0001
Q ss_pred CCCHhHHHHCCcEEEeCCcEEEEeCCCcE---EEeCCCcEEEeccEEecCCCCCC-cCCCCcCCC-CCcE-EEecCHHHH
Q 011322 124 RQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTAS-RFPEKIGGY-LPGV-HYIRDVADA 197 (488)
Q Consensus 124 ~~~~~~~~~~~v~~~~~~~v~~id~~~~~---v~~~~g~~i~yd~lVlAtG~~~~-~~~~~~g~~-~~~v-~~~~~~~~~ 197 (488)
....+++++.+++++.+++|++++.+++. |++.++ ++.||+||+|||.... ..|.++|.. ..+. .+.....+
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 157 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYST- 157 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCC-
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCC-
Confidence 12234456679999999999999987765 667777 7999999999996432 134444432 1121 11111111
Q ss_pred HHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecC-CCCccccc-CHHHHHHHHHHHH---------------
Q 011322 198 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE-NHLLQRLF-TPSLAQRYEQLYQ--------------- 260 (488)
Q Consensus 198 ~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~-~~~~~~~~-~~~~~~~~~~~l~--------------- 260 (488)
.....+++++|||+|.+|+|+|..|.+.+ +|+++.+. +.+++..+ +..+.+.+.+.+.
T Consensus 158 ----~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (357)
T 4a9w_A 158 ----PAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGF 232 (357)
T ss_dssp ----SGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC---------------------
T ss_pred ----hhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccc
Confidence 11236799999999999999999999998 69999988 56655432 2333333222222
Q ss_pred -------------HcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeC
Q 011322 261 -------------QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVD 327 (488)
Q Consensus 261 -------------~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd 327 (488)
+.|+ +..+..+.+++.. .+.+++|+++++|.||+|+|++|+++++++.++..++|+|.||
T Consensus 233 ~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~------~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G~i~vd 305 (357)
T 4a9w_A 233 GDIVMVPPVLDARARGV-LAAVPPPARFSPT------GMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQGQVEVD 305 (357)
T ss_dssp -CBCCCHHHHHHHHTTC-CCEECCCSEEETT------EEECTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTTSCBCBC
T ss_pred cCcccChhHHHHHhcCc-eEEecCcceEeCC------eeEECCCCEecCCEEEECCCcCCCCcccCcccccCCCCCcccc
Confidence 3444 5556667777632 5889999999999999999999999999999999667889999
Q ss_pred CC--CCCCCCCEEEEc--eecccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011322 328 GQ--FRTRMPGIFAIG--DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 328 ~~--~~t~~~~Iya~G--D~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
++ ++|+.|||||+| ||+..... .+..|..+|+.+|.+|..
T Consensus 306 ~~~l~~t~~~~vya~Gd~d~~~~~~~---------~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 306 GSGLRALAVPSVWLLGYGDWNGMASA---------TLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp TTSCBBSSCTTEEECSSCGGGSTTCS---------STTTHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCCeEEeccccccccchh---------hhhhhHHHHHHHHHHHHH
Confidence 99 899999999999 56652211 223377888888888864
No 75
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-33 Score=280.67 Aligned_cols=307 Identities=19% Similarity=0.222 Sum_probs=206.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC------CCCCCCCCCCcccc---CCC-CC---CCCCCCCccc-
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA------YAPYERPALTKGYL---FPL-DK---KPARLPGFHT- 116 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~------~~~~~~~~l~~~~~---~~~-~~---~~~~~~~~~~- 116 (488)
+++|+|||||+||+++|..|++.|+ . +|+|||+++ ..+.....+...+. +.. .. .....+.+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~-~-~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGI-T-DVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-C-CEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCC-C-cEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhcccccccccccc
Confidence 5799999999999999999999875 2 799999986 11111000000000 000 00 0000000000
Q ss_pred ---ccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCC--cEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEe
Q 011322 117 ---CVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYI 191 (488)
Q Consensus 117 ---~~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~--~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~ 191 (488)
............++++.+++++.+++|++++++. ..|.+.++ ++.||+||+|||+.+. |.+++ ..+.+.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~--p~ip~---~~~~~~ 155 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF--PKKPF---KYGIHY 155 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS--BCCCS---SSCEEG
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc--cCCCC---Cceech
Confidence 0000000112234466899999998999998763 56777776 5899999999998764 33333 222332
Q ss_pred cCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc------ccCHHHHHHHHHHHHHcC-c
Q 011322 192 RDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------LFTPSLAQRYEQLYQQNG-V 264 (488)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~------~~~~~~~~~~~~~l~~~G-V 264 (488)
..+.+.. ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++. .+++...+.+.+.+++.| |
T Consensus 156 ~~~~~~~-----~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v 230 (369)
T 3d1c_A 156 SEIEDFD-----NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARI 230 (369)
T ss_dssp GGCSCGG-----GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCE
T ss_pred hhcCChh-----hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcE
Confidence 2211111 125689999999999999999999999999999999887742 245677888999999997 9
Q ss_pred EEEcCCeEEEEEeCCCCcEEEEEeCCCcEEE-cCEEEEeecCcCCChhhHhcCCcccCCCEEeCCC-CCCCCCCEEEEce
Q 011322 265 KFVKGASIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ-FRTRMPGIFAIGD 342 (488)
Q Consensus 265 ~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~-~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~-~~t~~~~Iya~GD 342 (488)
++++++.|++++..+ +. ..+.+.+|+++. +|.||+|+|++|+.+++.+.++..++|++.||++ ++|++|+|||+||
T Consensus 231 ~~~~~~~v~~i~~~~-~~-~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD 308 (369)
T 3d1c_A 231 EMNVHYTVKDIDFNN-GQ-YHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGA 308 (369)
T ss_dssp EEECSCCEEEEEEET-TE-EEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSSTTEEECST
T ss_pred EEecCcEEEEEEecC-Cc-eEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCCCeEEecc
Confidence 999999999996432 22 357788998775 6999999999999877766556544677999985 6789999999999
Q ss_pred ecccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 011322 343 VAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 378 (488)
Q Consensus 343 ~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~ 378 (488)
|+..+....+ .+..+.+||+.+|++|.+..
T Consensus 309 ~~~~~~~~~~------~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 309 TVENDNAKLC------YIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp TCCCSSCCCC------SHHHHGGGHHHHHHHHHHHT
T ss_pred ccccCCeeEE------EEehhhHHHHHHHHHHhccc
Confidence 9987654322 34457888999999998643
No 76
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=2.4e-33 Score=289.75 Aligned_cols=289 Identities=22% Similarity=0.307 Sum_probs=210.0
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHh
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (488)
+..+||+|||||+||+++|.+|++.|+ +|+|||+...-.+ ..... ...+.++....+........+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~---~v~lie~~~GG~~---------~~~~~--~~~~~~~~~~~~~~l~~~l~~ 275 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGI---RTGLMGERFGGQV---------LDTVD--IENYISVPKTEGQKLAGALKA 275 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSTTGGG---------TTCSC--BCCBTTBSSBCHHHHHHHHHH
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCC---eEEEEECCCCCcc---------ccccc--ccccCCCCCCCHHHHHHHHHH
Confidence 346799999999999999999999987 8999986421100 00000 000111000000001112334
Q ss_pred HHHHCCcEEEeCCcEEEEeCC-----CcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCC---CCcEEEecCHHHHHHH
Q 011322 129 WYKEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADAL 200 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~-----~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~ 200 (488)
.+++.+++++.+++|+.++++ ..+|++++|+++.||+||+|||+.+.. +.++|.. ..++++....
T Consensus 276 ~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~-~~ipG~~~~~~~~v~~~~~~------ 348 (521)
T 1hyu_A 276 HVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN-MNVPGEDQYRTKGVTYCPHC------ 348 (521)
T ss_dssp HHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC-CCCTTTTTTTTTTEECCTTC------
T ss_pred HHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC-CCCCChhhhcCceEEEeecC------
Confidence 556789999998899999864 457888889889999999999998763 4455532 1344433221
Q ss_pred HHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHH-cCcEEEcCCeEEEEEeCC
Q 011322 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGS 279 (488)
Q Consensus 201 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~ 279 (488)
......+++++|||+|.+|+|+|..|++.+.+|+++++.+.+.. + ..+.+.+++ .||++++++.++++..+
T Consensus 349 ~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~~~gV~v~~~~~v~~i~~~- 420 (521)
T 1hyu_A 349 DGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRSLKNVDIILNAQTTEVKGD- 420 (521)
T ss_dssp CGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTTCTTEEEECSEEEEEEEEC-
T ss_pred chhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhcCCCcEEEeCCEEEEEEcC-
Confidence 12235689999999999999999999999999999999987764 2 245566666 69999999999999853
Q ss_pred CCcEEEEEeCC---Cc--EEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCCCCCCCEEEEceecccCCccCCc
Q 011322 280 DGRVAAVKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 353 (488)
Q Consensus 280 ~~~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~ 353 (488)
++++..+.+.+ |+ ++++|.|++++|.+|+++++++ .+..+ +|+|.||++++|++|+|||+|||+..+..
T Consensus 421 ~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~~---- 495 (521)
T 1hyu_A 421 GSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYK---- 495 (521)
T ss_dssp SSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSSC----
T ss_pred CCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCCcEEeCCCCCCCCCCEEEeecccCCCcc----
Confidence 45565666653 54 6899999999999999988876 36654 68899999999999999999999987532
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 011322 354 TARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 354 ~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
.+..|..+|+.+|.++..
T Consensus 496 -----~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 496 -----QIIIATGEGAKASLSAFD 513 (521)
T ss_dssp -----CHHHHHHHHHHHHHHHHH
T ss_pred -----eeeehHHhHHHHHHHHHH
Confidence 455688888888888753
No 77
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.5e-34 Score=278.57 Aligned_cols=288 Identities=18% Similarity=0.303 Sum_probs=201.3
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccc-cCCCCCCCCH
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTP 127 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 127 (488)
++++||+|||||+||+++|..|++.|+ +|+|||+.... . .+.... ....++++... ..........
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~g--g------~~~~~~--~~~~~~~~~~~~~~~~~~~~l~ 78 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQL---APLVFEGTSFG--G------ALMTTT--DVENYPGFRNGITGPELMDEMR 78 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTC---CCEEECCSSCS--C------GGGSCS--CBCCSTTCTTCBCHHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCCC--C------ceeccc--hhhhcCCCCCCCCHHHHHHHHH
Confidence 456899999999999999999999987 89999975211 0 011000 00011111100 0000011233
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCC-cEE-EeCCCcEEEeccEEecCCCCCCcCCCCcCCC---CCcEEEecCHHHHHHHHH
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEK-QTL-ITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALIS 202 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~-~~v-~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~ 202 (488)
+++++.+++++.++ |++++... .+| .+.+++++.||+||+|||+.+. .|.+++.. ..+++.. .....
T Consensus 79 ~~~~~~~v~~~~~~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~-~~~i~g~~~~~~~~~~~~------~~~~~ 150 (335)
T 2a87_A 79 EQALRFGADLRMED-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAAR-YLQVPGEQELLGRGVSSC------ATCDG 150 (335)
T ss_dssp HHHHHTTCEEECCC-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEEC-CCCCTHHHHTBTTTEESC------HHHHG
T ss_pred HHHHHcCCEEEEee-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCcc-CCCCCchHhccCCceEEe------eccch
Confidence 45667899999875 99998732 467 7788888999999999999875 34444421 1233322 12223
Q ss_pred hhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCc
Q 011322 203 SLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGR 282 (488)
Q Consensus 203 ~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~ 282 (488)
.+..+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.. .+.+ ..+.+++.||++++++++++++.++ .
T Consensus 151 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~~~---~~~~~~~~gV~v~~~~~v~~i~~~~--~ 222 (335)
T 2a87_A 151 FFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SKIM---LDRARNNDKIRFLTNHTVVAVDGDT--T 222 (335)
T ss_dssp GGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CTTH---HHHHHHCTTEEEECSEEEEEEECSS--S
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cHHH---HHHHhccCCcEEEeCceeEEEecCC--c
Confidence 345689999999999999999999999999999999887653 2222 1244567899999999999998542 3
Q ss_pred EEEEEeC---CC--cEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCC-CCCCCCCEEEEceecccCCccCCccc
Q 011322 283 VAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKMYDRTA 355 (488)
Q Consensus 283 v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~-~~t~~~~Iya~GD~a~~~~~~~~~~~ 355 (488)
+..+.+. +| +++++|.||+|+|++|+.++++ .++..+ +|+|.||++ ++|+.|+|||+|||+..+..
T Consensus 223 ~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~------ 295 (335)
T 2a87_A 223 VTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYR------ 295 (335)
T ss_dssp CCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCC------
T ss_pred EeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHH------
Confidence 2234443 45 5799999999999999988876 466654 688999985 68999999999999986421
Q ss_pred ccccHHHHHHHHHHHHHHHh
Q 011322 356 RVEHVDHARQSAQHCIKALL 375 (488)
Q Consensus 356 ~~~~~~~A~~~g~~~a~~i~ 375 (488)
.+..|..+|+.+|.++.
T Consensus 296 ---~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 296 ---QAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp ---CHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHhHHHHHHHHH
Confidence 35567788888888775
No 78
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=5.7e-34 Score=288.38 Aligned_cols=298 Identities=19% Similarity=0.198 Sum_probs=211.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
+++|||||||+||+++|..|++.+. +.+|+|||+++.+.|. |.+.. +... ......+ .....+++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~-~~~~~-~~~g-~~~~~~~-----------~~~~~~~~ 66 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFT-PAFPH-LAMG-WRKFEDI-----------SVPLAPLL 66 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECG-GGHHH-HHHT-CSCGGGS-----------EEESTTTG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcC-CCcch-hccC-ccCHHHH-----------HHHHHHHH
Confidence 4799999999999999999999432 4499999999887664 32211 1110 0011111 12334556
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCC-cEEEecCHHHHHHHHHhh---hc
Q 011322 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLP-GVHYIRDVADADALISSL---EK 206 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~-~v~~~~~~~~~~~~~~~~---~~ 206 (488)
++.+++++. .+|+.++++.++|.+++++++.||+||+|||+.+. +| +.... ....+.+..+...+.+.+ ..
T Consensus 67 ~~~gv~~~~-~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~-~p---g~~~~g~~~~~~~~~~a~~~~~~~~~~~~ 141 (430)
T 3h28_A 67 PKFNIEFIN-EKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FG---AEGQEENSTSICTAEHALETQKKLQELYA 141 (430)
T ss_dssp GGGTEEEEC-SCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CC---SBTHHHHSCCCSSHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEE-EEEEEEECCCCEEEECCCcEEECCEEEEcCCcccc-cC---CCCCcCCccCcCCHHHHHHHHHHHHHHHh
Confidence 678999987 59999999999999999999999999999999865 33 21111 122344555555544332 23
Q ss_pred CCeEEEECCcHHH------HHHHH----HHHhCC----CcEEEEecCCCCccccc--CHHHHHHHHHHHHHcCcEEEcCC
Q 011322 207 AKKVVVVGGGYIG------MEVAA----AAVGWK----LDTTIIFPENHLLQRLF--TPSLAQRYEQLYQQNGVKFVKGA 270 (488)
Q Consensus 207 ~~~vvVvG~G~~g------~e~A~----~l~~~g----~~vtlv~~~~~~~~~~~--~~~~~~~~~~~l~~~GV~v~~~~ 270 (488)
.++++|||+|..+ +|+|. .+.+.| .+|+++++.+.+....+ .+...+.+.+.+++.||++++++
T Consensus 142 ~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~ 221 (430)
T 3h28_A 142 NPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANV 221 (430)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSC
T ss_pred cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCC
Confidence 5567888887543 78774 455666 47999999887632111 23578888999999999999999
Q ss_pred eEEEEEeCCCCcEEEEEeCC----CcEEEcCEEEEeecCcCCChhhHh--cCCcccCC-CEEeCCCCCC-CCCCEEEEce
Q 011322 271 SIKNLEAGSDGRVAAVKLED----GSTIDADTIVIGIGAKPTVSPFER--VGLNSSVG-GIQVDGQFRT-RMPGIFAIGD 342 (488)
Q Consensus 271 ~v~~i~~~~~~~v~~v~~~~----g~~i~~D~vi~a~G~~p~~~~~~~--~gl~~~~g-~i~vd~~~~t-~~~~Iya~GD 342 (488)
.|++++.+ .+.+++ ++++++|.|++++|++|+ .++.+ .++..++| +|.||+++|| ++|||||+||
T Consensus 222 ~v~~v~~~------~v~~~~~~~~g~~i~~D~vv~a~G~~~~-~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD 294 (430)
T 3h28_A 222 AVKAIEPD------KVIYEDLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGV 294 (430)
T ss_dssp EEEEECSS------EEEEECTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECST
T ss_pred EEEEEeCC------eEEEEecCCCceEEeeeEEEECCCCccc-hhHhhccccCcCCCCCEEecCccccCCCCCCEEEEEe
Confidence 99999742 244555 778999999999999987 45555 57765678 8999999999 9999999999
Q ss_pred ecccCCccCCcc---cccccHHHHHHHHHHHHHHHhc
Q 011322 343 VAAFPLKMYDRT---ARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 343 ~a~~~~~~~~~~---~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
|+..+... +.. ........|..||+.+|+||..
T Consensus 295 ~~~~~~~~-~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 295 VTAIPPIE-KTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TBCCCCSS-CCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eeccCCcc-CCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99876421 110 0123566799999999999975
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.98 E-value=9e-33 Score=280.53 Aligned_cols=291 Identities=16% Similarity=0.163 Sum_probs=198.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
.+++|+|||||+||+++|..|++.+. +.+|+|||+++.. |... ..+ ..+....... ......++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~vie~~~~~-gg~~--~~g-~~p~~~~~~~-----------~~~~~~~~ 68 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHS-RAHVDIYEKQLVP-FGLV--RFG-VAPDHPEVKN-----------VINTFTQT 68 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCS-SCEEEEECSSSSS-CTHH--HHT-SCTTCGGGGG-----------HHHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCC-CCCEEEEeCCCcC-Ccee--ecc-cCCCCccHHH-----------HHHHHHHH
Confidence 45799999999999999999999883 4599999998764 3211 000 0000000000 01123455
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHH----HHHh--
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADA----LISS-- 203 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~----~~~~-- 203 (488)
+++.+++++.++.+ .+.|++++. .+.||+||||||+.+...++++|.+.+++++.+++....+ ....
T Consensus 69 ~~~~gv~~~~~~~v------~~~V~~~~~-~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~ 141 (460)
T 1cjc_A 69 ARSDRCAFYGNVEV------GRDVTVQEL-QDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAP 141 (460)
T ss_dssp HTSTTEEEEBSCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCC
T ss_pred HHhCCcEEEeeeEE------eeEEEeccc-eEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCcccccccc
Confidence 66789999987655 133444443 3689999999999863456778877788887654322110 0000
Q ss_pred hhcCCeEEEECCcHHHHHHHHHHH--------------------hCCC-cEEEEecCCCCc--------------cc---
Q 011322 204 LEKAKKVVVVGGGYIGMEVAAAAV--------------------GWKL-DTTIIFPENHLL--------------QR--- 245 (488)
Q Consensus 204 ~~~~~~vvVvG~G~~g~e~A~~l~--------------------~~g~-~vtlv~~~~~~~--------------~~--- 245 (488)
...+++++|||+|++|+|+|..|. +.+. +|+++.|++.+. +.
T Consensus 142 ~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~ 221 (460)
T 1cjc_A 142 DLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRP 221 (460)
T ss_dssp CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCcee
Confidence 014789999999999999999999 5676 799999987652 21
Q ss_pred -----cc----------CHH---HHHHHHHHHHH--------------cCcEEEcCCeEEEEEeCCCC-cEEEEEeC---
Q 011322 246 -----LF----------TPS---LAQRYEQLYQQ--------------NGVKFVKGASIKNLEAGSDG-RVAAVKLE--- 289 (488)
Q Consensus 246 -----~~----------~~~---~~~~~~~~l~~--------------~GV~v~~~~~v~~i~~~~~~-~v~~v~~~--- 289 (488)
.+ +.. +.+.+.+.+++ +||++++++.++++..++++ ++..|.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~ 301 (460)
T 1cjc_A 222 MLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTR 301 (460)
T ss_dssp ECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEE
T ss_pred EechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEE
Confidence 01 110 23344445555 89999999999999854335 56555543
Q ss_pred ------------CC--cEEEcCEEEEeecCcCCChhhHhcCC-ccc-CCCEEeCCCCCCC-CCCEEEEceecccCCccCC
Q 011322 290 ------------DG--STIDADTIVIGIGAKPTVSPFERVGL-NSS-VGGIQVDGQFRTR-MPGIFAIGDVAAFPLKMYD 352 (488)
Q Consensus 290 ------------~g--~~i~~D~vi~a~G~~p~~~~~~~~gl-~~~-~g~i~vd~~~~t~-~~~Iya~GD~a~~~~~~~~ 352 (488)
+| ++++||.||+++|++|+. + .|+ ..+ +|+|.||+++||+ +|+|||+|||+..+..
T Consensus 302 l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~--- 374 (460)
T 1cjc_A 302 LEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPTG--- 374 (460)
T ss_dssp EESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C---CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTTC---
T ss_pred EccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C---CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCCc---
Confidence 34 579999999999999996 3 566 655 5889999999998 7999999999975432
Q ss_pred cccccccHHHHHHHHHHHHHHHhc
Q 011322 353 RTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 353 ~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
.+..|+.+|..+|.+|++
T Consensus 375 ------~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 375 ------VITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp ------CHHHHHHHHHHHHHHHHH
T ss_pred ------cHHHHHHHHHHHHHHHHH
Confidence 244577778888877764
No 80
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=2.4e-32 Score=292.78 Aligned_cols=294 Identities=16% Similarity=0.201 Sum_probs=199.5
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
...+++|+|||||+||++||..|++.|+ +|+|||+++..... +... ..++++... ....
T Consensus 386 ~~~~~~VvIIGgGpAGl~aA~~L~~~G~---~Vtlie~~~~~GG~-------~~~~-----~~~pg~~~~------~~~~ 444 (729)
T 1o94_A 386 TKNKDSVLIVGAGPSGSEAARVLMESGY---TVHLTDTAEKIGGH-------LNQV-----AALPGLGEW------SYHR 444 (729)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSTTTT-------HHHH-----TTSTTCGGG------HHHH
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCcCCe-------eeec-----ccCCChHHH------HHHH
Confidence 3456899999999999999999999987 89999998764221 0000 011111100 0111
Q ss_pred hHHHHCCcEEE--eCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCC-------cCCCCcCCC--CCcEEEecCHHH
Q 011322 128 EWYKEKGIEMI--YQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS-------RFPEKIGGY--LPGVHYIRDVAD 196 (488)
Q Consensus 128 ~~~~~~~v~~~--~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~-------~~~~~~g~~--~~~v~~~~~~~~ 196 (488)
++++. .++.+ .+..+..++. ++.++++++..+.||+||||||+.+. ..++++|.+ .+++++. .+
T Consensus 445 ~~~~~-~i~~~~~~~~~~v~i~~-~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~---~~ 519 (729)
T 1o94_A 445 DYRET-QITKLLKKNKESQLALG-QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTP---EQ 519 (729)
T ss_dssp HHHHH-HHHHHHHHSTTCEEECS-CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECH---HH
T ss_pred HHHHH-HHHHhhcccCCceEEEe-CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEH---HH
Confidence 12111 11110 0112233332 23444555556899999999999842 234556654 4555543 22
Q ss_pred HHHHHHhhhcCCeEEEEC--CcHHHHHHHHHHHhCCCcEEEEecCCCCccc-ccCHHHHHHHHHHHHHcCcEEEcCCeEE
Q 011322 197 ADALISSLEKAKKVVVVG--GGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-LFTPSLAQRYEQLYQQNGVKFVKGASIK 273 (488)
Q Consensus 197 ~~~~~~~~~~~~~vvVvG--~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~-~~~~~~~~~~~~~l~~~GV~v~~~~~v~ 273 (488)
. +......+++|+||| +|.+|+|+|..|+++|.+|+++++.+ ++++ .++.. ...+.+.|++.||++++++.++
T Consensus 520 ~--l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~ 595 (729)
T 1o94_A 520 V--MDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCS 595 (729)
T ss_dssp H--HHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEE
T ss_pred H--hcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEE
Confidence 2 222234578999998 99999999999999999999999998 6653 13333 4567788899999999999999
Q ss_pred EEEeCCCCcEEEEE--eCCC-cE------------------EEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCC
Q 011322 274 NLEAGSDGRVAAVK--LEDG-ST------------------IDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRT 332 (488)
Q Consensus 274 ~i~~~~~~~v~~v~--~~~g-~~------------------i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t 332 (488)
+++. ++ + .+. +.++ ++ +++|.||+|+|.+|+++++++++. .+|++++|
T Consensus 596 ~i~~--~~-v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~~-------~vd~~~~t 664 (729)
T 1o94_A 596 RIEP--GR-M-EIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELKA-------RESEWAEN 664 (729)
T ss_dssp EEET--TE-E-EEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHHH-------TGGGTGGG
T ss_pred EEEC--Ce-E-EEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHHHhh-------hccccccc
Confidence 9973 22 2 222 1233 33 999999999999999988775431 26889999
Q ss_pred CCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeEeccccC
Q 011322 333 RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYE 396 (488)
Q Consensus 333 ~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~ 396 (488)
++|+|||+|||+... .+..|..+|+.+|.+|.+. ..+..+|| |++++++.
T Consensus 665 ~~~~VyAiGD~~~~~-----------~~~~A~~~G~~aA~~i~~~--l~~~~~p~-~~~~~~~~ 714 (729)
T 1o94_A 665 DIKGIYLIGDAEAPR-----------LIADATFTGHRVAREIEEA--NPQIAIPY-KRETIAWG 714 (729)
T ss_dssp TCCEEEECGGGTSCC-----------CHHHHHHHHHHHHHTTTSS--CTTSCCCC-CCCCCCTT
T ss_pred CCCCeEEEeCccchh-----------hHHHHHHHHHHHHHHhhhh--cccCCCCe-eeecccCc
Confidence 999999999999621 4567999999999999853 34667888 77887754
No 81
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.97 E-value=4.5e-31 Score=268.99 Aligned_cols=289 Identities=15% Similarity=0.150 Sum_probs=195.5
Q ss_pred CCeEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCC----CCC-CC-----------CCccccCCCCCCCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAP----YER-PA-----------LTKGYLFPLDKKPARL 111 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~lie~~~~~~----~~~-~~-----------l~~~~~~~~~~~~~~~ 111 (488)
.++|+|||||+||++||..|++ .|.+..+|+|||+++... |.. +. +..............+
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCB
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhccc
Confidence 3699999999999999999999 887212299999986532 110 00 0000000000000001
Q ss_pred CCccccc-----------CCCCCCCCHhHHHHCCcE--EEeCCcEEEEeCCCc----EEEeCC---C--cEEEeccEEec
Q 011322 112 PGFHTCV-----------GSGGERQTPEWYKEKGIE--MIYQDPVTSIDIEKQ----TLITNS---G--KLLKYGSLIVA 169 (488)
Q Consensus 112 ~~~~~~~-----------~~~~~~~~~~~~~~~~v~--~~~~~~v~~id~~~~----~v~~~~---g--~~i~yd~lVlA 169 (488)
+.+.... .......+.+++++.+++ ++++++|+.++.... +|++.+ | .++.||+||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 82 ADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEEC
Confidence 1110000 000001122334556887 888899999987654 677654 4 56899999999
Q ss_pred CC--CCCCcCCCCcCCCC-Cc-EEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc
Q 011322 170 TG--CTASRFPEKIGGYL-PG-VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR 245 (488)
Q Consensus 170 tG--~~~~~~~~~~g~~~-~~-v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~ 245 (488)
|| +.|. .|.++|.+. ++ +.+..++.+. ....+++|+|||+|.+|+|+|..|++.+.+|+++++++.+++.
T Consensus 162 tG~~s~p~-~p~ipG~~~~~g~~~hs~~~~~~-----~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~ 235 (464)
T 2xve_A 162 TGHFSTPY-VPEFEGFEKFGGRILHAHDFRDA-----LEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY 235 (464)
T ss_dssp CCSSSSBC-CCCCBTTTTCCSEEEEGGGCCCG-----GGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC
T ss_pred CCCCCCCc-cCCCCCcccCCceEEehhhhCCH-----hHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC
Confidence 99 6665 455666432 33 3332221111 1236899999999999999999999999999999999887764
Q ss_pred ccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHh-cCCcccCC-C
Q 011322 246 LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER-VGLNSSVG-G 323 (488)
Q Consensus 246 ~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~-~gl~~~~g-~ 323 (488)
.++ .||+++ ..|++++. + .|.++||+++++|.||+|||++|+.+++.. .++..+++ .
T Consensus 236 ~~~-------------~~V~~~--~~V~~i~~---~---~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~ 294 (464)
T 2xve_A 236 KWP-------------ENWDER--PNLVRVDT---E---NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLW 294 (464)
T ss_dssp CCC-------------TTEEEC--SCEEEECS---S---EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSC
T ss_pred CCC-------------CceEEc--CCeEEEeC---C---EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCcc
Confidence 322 478887 67888852 2 578899999999999999999999988875 67777655 4
Q ss_pred EEeCCC---CCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 011322 324 IQVDGQ---FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 378 (488)
Q Consensus 324 i~vd~~---~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~ 378 (488)
+ ++.+ ++|+.|+|||+|||+... .+..|..||+.+|+++.+..
T Consensus 295 v-~~~~~~~~~t~~p~i~aiGd~~~~~-----------~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 295 P-LNLYKGVVWEDNPKFFYIGMQDQWY-----------SFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp C-SSEETTTEESSSTTEEECSCSCCSS-----------CHHHHHHHHHHHHHHHTTSS
T ss_pred c-ccccceEecCCCCCEEEEeCccccc-----------chHHHHHHHHHHHHHHcCCC
Confidence 4 4433 568999999999988632 45678999999999998754
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=6.2e-32 Score=274.06 Aligned_cols=287 Identities=18% Similarity=0.203 Sum_probs=193.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHH-c------CCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVE-H------GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGG 122 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~-~------g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (488)
.+++|+|||||+||++||..|++ . +. +|+|||+++.+ |.... .+ ..+....... .
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~---~V~lie~~~~~-gg~~~--~g-v~p~~~~~~~-----------~ 63 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDM---AVDMLEMLPTP-WGLVR--SG-VAPDHPKIKS-----------I 63 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCE---EEEEEESSSSC-STHHH--HT-SCTTCTGGGG-----------G
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCC---eEEEEecCCCC-CCccc--cc-cCCCCCCHHH-----------H
Confidence 35799999999999999999999 7 65 89999998763 32110 00 1110000000 0
Q ss_pred CCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHH-H
Q 011322 123 ERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL-I 201 (488)
Q Consensus 123 ~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~ 201 (488)
.....+++++.+++++.+..+ .+.|++++++ +.||+||||||+.+...++++|.+.+++++.+++....+- .
T Consensus 64 ~~~~~~~~~~~~v~~~~~v~v------~~~v~~~~~~-~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~ 136 (456)
T 1lqt_A 64 SKQFEKTAEDPRFRFFGNVVV------GEHVQPGELS-ERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHP 136 (456)
T ss_dssp HHHHHHHHTSTTEEEEESCCB------TTTBCHHHHH-HHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCG
T ss_pred HHHHHHHHhcCCCEEEeeEEE------CCEEEECCCe-EeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCc
Confidence 122345566678999887443 2345555553 7999999999997323456778777788775443211000 0
Q ss_pred ---Hhh--hcCCeEEEECCcHHHHHHHHHHHhC--------------------C-CcEEEEecCCCCcccccC-------
Q 011322 202 ---SSL--EKAKKVVVVGGGYIGMEVAAAAVGW--------------------K-LDTTIIFPENHLLQRLFT------- 248 (488)
Q Consensus 202 ---~~~--~~~~~vvVvG~G~~g~e~A~~l~~~--------------------g-~~vtlv~~~~~~~~~~~~------- 248 (488)
... ..+++++|||+|++|+|+|..|.+. + .+|+++.|++.+...+..
T Consensus 137 d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~ 216 (456)
T 1lqt_A 137 HFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELA 216 (456)
T ss_dssp GGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGG
T ss_pred ccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhh
Confidence 011 1578999999999999999999974 4 489999998866542111
Q ss_pred -----------HHH------------------HHHHHHHHHH------cCcEEEcCCeEEEEEeCCCCcEEEEEeC----
Q 011322 249 -----------PSL------------------AQRYEQLYQQ------NGVKFVKGASIKNLEAGSDGRVAAVKLE---- 289 (488)
Q Consensus 249 -----------~~~------------------~~~~~~~l~~------~GV~v~~~~~v~~i~~~~~~~v~~v~~~---- 289 (488)
+++ .+.+.+.+++ +||++++++.++++..+ +.+..|.++
T Consensus 217 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~ 294 (456)
T 1lqt_A 217 DLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNEL 294 (456)
T ss_dssp GCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEE
T ss_pred cCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEe
Confidence 111 2344444555 79999999999999843 344344443
Q ss_pred ------------CC--cEEEcCEEEEeecCcCCChhhHhcCCccc-CCCEEeCCCCC-CCCCCEEEEceecccCCccCCc
Q 011322 290 ------------DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFR-TRMPGIFAIGDVAAFPLKMYDR 353 (488)
Q Consensus 290 ------------~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~-t~~~~Iya~GD~a~~~~~~~~~ 353 (488)
+| ++++||.|++++|++|+. + .++..+ +|++.+|+++| |+.|+|||+|||+..|...
T Consensus 295 ~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~--- 367 (456)
T 1lqt_A 295 VSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGV--- 367 (456)
T ss_dssp EECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSC---
T ss_pred cCCCcccccccCCCceEEEEcCEEEEccccccCC-C---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchh---
Confidence 34 469999999999999986 3 355554 57899999999 7999999999999755421
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 011322 354 TARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 354 ~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
+..|+.+|..+|.+|++
T Consensus 368 ------i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 368 ------IGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp ------TTHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHH
Confidence 22366777777777754
No 83
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=6e-31 Score=289.25 Aligned_cols=279 Identities=15% Similarity=0.171 Sum_probs=205.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC-CCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA-LTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
.+||||||||+||++||.+|++.|+ +|+|||+++..... .. .++..+ ++... ..+.....+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~---~V~lie~~~~~GG~-~~~~~k~~i----------~~~~~---~~~~~~~~~~ 190 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGA---RVMLLDERAEAGGT-LLDTAGEQI----------DGMDS---SAWIEQVTSE 190 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSSGG-GGGSSCCEE----------TTEEH---HHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCCCCce-eccCCcccc----------CCCCH---HHHHHHHHHH
Confidence 4789999999999999999999987 89999998764311 10 000000 00000 0000111223
Q ss_pred HHH-CCcEEEeCCcEEEEeCCCcEEEe-----------------CCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEe
Q 011322 130 YKE-KGIEMIYQDPVTSIDIEKQTLIT-----------------NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYI 191 (488)
Q Consensus 130 ~~~-~~v~~~~~~~v~~id~~~~~v~~-----------------~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~ 191 (488)
+.+ .+++++.+++|..++.++....+ .++.++.||+||||||+.+. .++++|.+.+++++.
T Consensus 191 l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~-~~~ipG~~~~gv~~~ 269 (965)
T 2gag_A 191 LAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHER-PIVFENNDRPGIMLA 269 (965)
T ss_dssp HHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEEC-CCCCBTCCSTTEEEH
T ss_pred HhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccC-CCCCCCCCCCCEEEh
Confidence 344 48999998899998876532211 11236899999999999876 456788888898876
Q ss_pred cCHHHHHHHHHh--hhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcC
Q 011322 192 RDVADADALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKG 269 (488)
Q Consensus 192 ~~~~~~~~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~ 269 (488)
.++. .+... ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++ . .+.+++.||+++++
T Consensus 270 ~~~~---~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~-----~-----~~~l~~~GV~v~~~ 336 (965)
T 2gag_A 270 GAVR---SYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA-----A-----AAQAVADGVQVISG 336 (965)
T ss_dssp HHHH---HHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH-----H-----HHHHHHTTCCEEET
T ss_pred HHHH---HHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch-----h-----HHHHHhCCeEEEeC
Confidence 4432 22221 22468999999999999999999999999999999987654 1 45678999999999
Q ss_pred CeEEEEEeCCCCcEEEEEeCC-------C--cEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCC-----CCCC
Q 011322 270 ASIKNLEAGSDGRVAAVKLED-------G--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR-----TRMP 335 (488)
Q Consensus 270 ~~v~~i~~~~~~~v~~v~~~~-------g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~-----t~~~ 335 (488)
+.+++++..+++.+..|++.+ | ++++||.|++++|++|++++++.. .++|.+|++++ |+.|
T Consensus 337 ~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~-----~g~i~vd~~~~~~v~~ts~p 411 (965)
T 2gag_A 337 SVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR-----QGKLDWDTTIHAFVPADAVA 411 (965)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT-----TCCEEEETTTTEEEECSCCT
T ss_pred CEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC-----CCcEEEcCcccccccCCCCC
Confidence 999999853245555666654 5 679999999999999999988765 36899999887 8999
Q ss_pred CEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011322 336 GIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 336 ~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
+|||+|||+..+. ...|..+|+.+|.+|++
T Consensus 412 ~IyAaGD~a~~~~-----------l~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 412 NQHLAGAMTGRLD-----------TASALSTGAATGAAAAT 441 (965)
T ss_dssp TEEECGGGGTCCS-----------HHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCchh-----------HHHHHHHHHHHHHHHHH
Confidence 9999999998642 23588999999999864
No 84
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=7.8e-32 Score=287.70 Aligned_cols=276 Identities=18% Similarity=0.163 Sum_probs=194.4
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
...++||+|||||+||++||..|++.|+ +|+|||+++..... ... . .. +++.... ........
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~---~V~liE~~~~~GG~-~~~-~-~~---------~p~~~~~--~~~~~~~~ 450 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGY---DVVLAEAGRDLGGR-VTQ-E-SA---------LPGLSAW--GRVKEYRE 450 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSCTH-HHH-H-HT---------STTCGGG--GHHHHHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCCCCE-eee-c-cC---------CCchhHH--HHHHHHHH
Confidence 3457899999999999999999999987 89999998754321 000 0 00 0110000 00001123
Q ss_pred hHHHHC-CcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCC-------cCCCCcCCCCCcEEEecCHHHHHH
Q 011322 128 EWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS-------RFPEKIGGYLPGVHYIRDVADADA 199 (488)
Q Consensus 128 ~~~~~~-~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~-------~~~~~~g~~~~~v~~~~~~~~~~~ 199 (488)
..+.+. ++++++++.++ .+++.++.||+||+|||+.+. ..+.++|.+.+++.+. .+ .
T Consensus 451 ~~~~~~~gv~~~~~~~v~----------~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~---~~--~ 515 (690)
T 3k30_A 451 AVLAELPNVEIYRESPMT----------GDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGP---DD--L 515 (690)
T ss_dssp HHHHTCTTEEEESSCCCC----------HHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECH---HH--H
T ss_pred HHHHHcCCCEEEECCeec----------HHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcH---HH--H
Confidence 344555 88888775432 233445789999999999853 1344555544444332 22 1
Q ss_pred HHHhhhcCCeEEEEC--CcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEe
Q 011322 200 LISSLEKAKKVVVVG--GGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 277 (488)
Q Consensus 200 ~~~~~~~~~~vvVvG--~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 277 (488)
+......+++++||| +|.+|+|+|..|.+.|.+|+++++.+.+++...++.....+.+.+++.||+++++++|++++.
T Consensus 516 l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~ 595 (690)
T 3k30_A 516 FAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGA 595 (690)
T ss_dssp HTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEET
T ss_pred hCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEEC
Confidence 222334678899999 999999999999999999999999998887655566678888999999999999999999984
Q ss_pred CCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCccccc
Q 011322 278 GSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 357 (488)
Q Consensus 278 ~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~ 357 (488)
+ +..+..+...+++++++|.||+|+|++|+.++++.++.... +|+.|+|||+|||+..+
T Consensus 596 ~-~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~~~~----------~t~~~~VyaiGD~~~~~---------- 654 (690)
T 3k30_A 596 G-GVTVRDTYASIERELECDAVVMVTARLPREELYLDLVARRD----------AGEIASVRGIGDAWAPG---------- 654 (690)
T ss_dssp T-EEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHHHHH----------HTSCSEEEECGGGTSCB----------
T ss_pred C-eEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhhhhc----------ccCCCCEEEEeCCCchh----------
Confidence 2 21111111235668999999999999999988776532211 78899999999999742
Q ss_pred ccHHHHHHHHHHHHHHHhcC
Q 011322 358 EHVDHARQSAQHCIKALLSA 377 (488)
Q Consensus 358 ~~~~~A~~~g~~~a~~i~~~ 377 (488)
.+..|..+|+.+|.+|.+.
T Consensus 655 -~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 655 -TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp -CHHHHHHHHHHHHHHTTCC
T ss_pred -hHHHHHHHHHHHHHHHHhh
Confidence 3456999999999999864
No 85
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=1.7e-30 Score=265.68 Aligned_cols=314 Identities=14% Similarity=0.084 Sum_probs=191.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCC---CcEEEEcCCCCCCCCCCCCCccccCC------C--CCCCCCCCCcc---
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMAD---GRLCIVSKEAYAPYERPALTKGYLFP------L--DKKPARLPGFH--- 115 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~---~~V~lie~~~~~~~~~~~l~~~~~~~------~--~~~~~~~~~~~--- 115 (488)
.++||+|||||+||+++|..|++.|. + .+|+|||+++...|....+..+.... . ...+.....+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~-~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQ-AQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHH-HHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhccc-ccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 34699999999999999999999982 1 38999999987665431111000000 0 00000000000
Q ss_pred cccC---------C------CCCCCCHhHHHHCCcEEEeCCcEEEEeCC---Cc----EEEeCCCc----EEEeccEEec
Q 011322 116 TCVG---------S------GGERQTPEWYKEKGIEMIYQDPVTSIDIE---KQ----TLITNSGK----LLKYGSLIVA 169 (488)
Q Consensus 116 ~~~~---------~------~~~~~~~~~~~~~~v~~~~~~~v~~id~~---~~----~v~~~~g~----~i~yd~lVlA 169 (488)
...+ . .+..+...+.++.+++++++++|++++++ .+ +|++.+++ ++.||+||+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVS 187 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEEC
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEEC
Confidence 0000 0 00000111223457889999899999876 43 66666765 7999999999
Q ss_pred CCCCCCcCCC-CcCCCCC-cEEEecCHHH-HHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhC--CCcEEEEecCCCCcc
Q 011322 170 TGCTASRFPE-KIGGYLP-GVHYIRDVAD-ADALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQ 244 (488)
Q Consensus 170 tG~~~~~~~~-~~g~~~~-~v~~~~~~~~-~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~--g~~vtlv~~~~~~~~ 244 (488)
||+.|. .|. ..+.... .+.+.....+ ...+......+++|+|||+|.+|+|+|..|.+. +.+|++++|.+.+++
T Consensus 188 tG~~p~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p 266 (463)
T 3s5w_A 188 PGGTPR-IPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP 266 (463)
T ss_dssp CCCEEC-CCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB
T ss_pred CCCCCC-CcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC
Confidence 999765 343 2221111 3333322221 111211112588999999999999999999998 889999999988755
Q ss_pred cc-------------------cCHHHHHHHHHHHHH--------------------------cCcEEEcCCeEEEEEeCC
Q 011322 245 RL-------------------FTPSLAQRYEQLYQQ--------------------------NGVKFVKGASIKNLEAGS 279 (488)
Q Consensus 245 ~~-------------------~~~~~~~~~~~~l~~--------------------------~GV~v~~~~~v~~i~~~~ 279 (488)
.. +++.....+.+.+.. .||++++++.|++++.++
T Consensus 267 ~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~ 346 (463)
T 3s5w_A 267 ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA 346 (463)
T ss_dssp CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET
T ss_pred ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC
Confidence 21 122222222222222 599999999999998643
Q ss_pred CCcEEEEEeC---CCcE--EEcCEEEEeecCcCC--ChhhHhcCCcccCCCEEeCCCCCCC-----CCCEEEEceecccC
Q 011322 280 DGRVAAVKLE---DGST--IDADTIVIGIGAKPT--VSPFERVGLNSSVGGIQVDGQFRTR-----MPGIFAIGDVAAFP 347 (488)
Q Consensus 280 ~~~v~~v~~~---~g~~--i~~D~vi~a~G~~p~--~~~~~~~gl~~~~g~i~vd~~~~t~-----~~~Iya~GD~a~~~ 347 (488)
+. ..+.+. +|+. +++|.||+|||++|+ .++++.+.... |++.||+++++. .|+|||+|||....
T Consensus 347 -~~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~--g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~ 422 (463)
T 3s5w_A 347 -QG-IELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL--GDHEIGRDYRLQTDERCKVAIYAQGFSQASH 422 (463)
T ss_dssp -TE-EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB--C--CCCTTSBCCBCTTBCSEEEESSCCHHHH
T ss_pred -CE-EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh--CCcccCcccccccCCCCCCeEEEcCCCcccC
Confidence 32 245555 6654 999999999999999 66776654333 789999999874 46799999998643
Q ss_pred CccCCcccccccHHHHHHHHHHHHHHH
Q 011322 348 LKMYDRTARVEHVDHARQSAQHCIKAL 374 (488)
Q Consensus 348 ~~~~~~~~~~~~~~~A~~~g~~~a~~i 374 (488)
..... ..-..|.+++.+++..+
T Consensus 423 g~~~~-----~l~~~a~r~~~i~~~~~ 444 (463)
T 3s5w_A 423 GLSDT-----LLSVLPVRAEEISGSLY 444 (463)
T ss_dssp CTTTT-----SSTTHHHHHHHHHHHHH
T ss_pred CcCcc-----chhHHHHHHHHHHHHHH
Confidence 32111 11223666666554433
No 86
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=1.6e-30 Score=266.90 Aligned_cols=253 Identities=16% Similarity=0.165 Sum_probs=189.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
++||+|||||+||+++|.+|++. + +|+|||+++...+.....+.... . ++. . ......++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~---~V~vie~~~~~GG~~~~~~~~~~-g-------~~~----~----~~~~~~~l 167 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-L---TVALIEERGWLGGDMWLKGIKQE-G-------FNK----D----SRKVVEEL 167 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-C---CEEEECTTSSSSCSGGGTCSEET-T-------TTE----E----HHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-C---CEEEEeCCCCCCCeeeccccccC-C-------CCC----C----HHHHHHHH
Confidence 46899999999999999999998 5 89999999876655332221110 0 000 0 00011121
Q ss_pred H---HCCcEEEeCCcEEEEeCCCcEEEe---CCCc--EEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHH
Q 011322 131 K---EKGIEMIYQDPVTSIDIEKQTLIT---NSGK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALIS 202 (488)
Q Consensus 131 ~---~~~v~~~~~~~v~~id~~~~~v~~---~~g~--~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 202 (488)
. ..+++++.+++|.+++.+.+.+.+ ++++ .+.||+||||||+.+. .+++++.+.+++++.. +...+.+
T Consensus 168 ~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~-~~~~~g~~~~gv~~~~---~~~~~~~ 243 (493)
T 1y56_A 168 VGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDS-TMLFENNDMPGVFRRD---FALEVMN 243 (493)
T ss_dssp HHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEEC-CCCCTTTTSTTEEEHH---HHHHHHH
T ss_pred HHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCcc-CCCCCCCCCCCEEEcH---HHHHHHH
Confidence 1 358898888888888877653322 4454 6899999999999886 4567788888887753 3333433
Q ss_pred h--hhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCC
Q 011322 203 S--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 280 (488)
Q Consensus 203 ~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~ 280 (488)
. ...+++++|+|+|++|+| +.+++.||++++++.+++++.+
T Consensus 244 ~~~~~~~~~vvViGgG~~gle-----------------------------------~~l~~~GV~v~~~~~v~~i~~~-- 286 (493)
T 1y56_A 244 VWEVAPGRKVAVTGSKADEVI-----------------------------------QELERWGIDYVHIPNVKRVEGN-- 286 (493)
T ss_dssp TSCBCSCSEEEEESTTHHHHH-----------------------------------HHHHHHTCEEEECSSEEEEECS--
T ss_pred hcccCCCCEEEEECCCHHHHH-----------------------------------HHHHhCCcEEEeCCeeEEEecC--
Confidence 3 235689999999999988 4567889999999999999843
Q ss_pred CcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCccc---CCCEE-eCCCCCCCCCCEEEEceecccCCccCCcccc
Q 011322 281 GRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS---VGGIQ-VDGQFRTRMPGIFAIGDVAAFPLKMYDRTAR 356 (488)
Q Consensus 281 ~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~---~g~i~-vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~ 356 (488)
+.+..+.+++|+++++|.||+++|++|+.++++.+|+... +|++. ||++++ +.|+|||+|||+..+
T Consensus 287 ~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~~--------- 356 (493)
T 1y56_A 287 EKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSIK--------- 356 (493)
T ss_dssp SSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCCC---------
T ss_pred CceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCcc---------
Confidence 3445677889999999999999999999999999988652 56676 899999 999999999999743
Q ss_pred cccHHHHHHHHHHHHHHHhc
Q 011322 357 VEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 357 ~~~~~~A~~~g~~~a~~i~~ 376 (488)
.+..|..+|+.+|.+|.+
T Consensus 357 --~~~~A~~~g~~aa~~i~~ 374 (493)
T 1y56_A 357 --PHYANYLEGKLVGAYILK 374 (493)
T ss_dssp --CHHHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHH
Confidence 455689999999999875
No 87
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1.7e-29 Score=268.89 Aligned_cols=262 Identities=18% Similarity=0.206 Sum_probs=188.2
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
...+++|+|||||+||++||..|++.|+ +|+|||+++.+.+. +.+.. ..+... . +.. ......
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~---~V~lie~~~~~gg~-~~~~~--~~~~~~---~---~~~-----~~~~~~ 432 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGH---QVTLFDAHSEIGGQ-FNIAK--QIPGKE---E---FYE-----TLRYYR 432 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSSCTT-HHHHT--TSTTCT---T---HHH-----HHHHHH
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCCe-eeccc--cCCCHH---H---HHH-----HHHHHH
Confidence 3456899999999999999999999887 89999998775433 11110 000000 0 000 001123
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEE-EeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhc
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLL-KYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 206 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i-~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~ 206 (488)
.++++.++++++++.|.. ..+ .||+||||||+.|. .|.++|.+.+++++.. +.+......
T Consensus 433 ~~~~~~gv~~~~~~~v~~-------------~~~~~~d~lviAtG~~p~-~~~i~G~~~~~v~~~~-----~~l~~~~~~ 493 (671)
T 1ps9_A 433 RMIEVTGVTLKLNHTVTA-------------DQLQAFDETILASGIVPR-TPPIDGIDHPKVLSYL-----DVLRDKAPV 493 (671)
T ss_dssp HHHHHHTCEEEESCCCCS-------------SSSCCSSEEEECCCEEEC-CCCCBTTTSTTEEEHH-----HHHTSCCCC
T ss_pred HHHHHcCCEEEeCcEecH-------------HHhhcCCEEEEccCCCcC-CCCCCCCCCCcEeeHH-----HHhhCCCCC
Confidence 455678999999875531 114 89999999999886 4566776556666542 222222345
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-------------------------------------cEEEEecCCCCcccccCH
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKL-------------------------------------DTTIIFPENHLLQRLFTP 249 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~-------------------------------------~vtlv~~~~~~~~~~~~~ 249 (488)
+++|+|||+|.+|+|+|..|++.|. +|+++++.+..+.+.+++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~ 573 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGK 573 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCT
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhcccccc
Confidence 7999999999999999999998763 456777777666666777
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeC
Q 011322 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVD 327 (488)
Q Consensus 250 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd 327 (488)
.....+.+.|++.||++++++++++++. ++ + .+. .+| +++++|.||+|+|++|++++++.+.
T Consensus 574 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~-v-~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l~----------- 637 (671)
T 1ps9_A 574 TTGWIHRTTLLSRGVKMIPGVSYQKIDD--DG-L-HVV-INGETQVLAVDNVVICAGQEPNRALAQPLI----------- 637 (671)
T ss_dssp TTHHHHHHHHHHTTCEEECSCEEEEEET--TE-E-EEE-ETTEEEEECCSEEEECCCEEECCTTHHHHH-----------
T ss_pred ccHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce-E-EEe-cCCeEEEEeCCEEEECCCccccHHHHHHHH-----------
Confidence 7788888999999999999999999973 22 2 222 577 5799999999999999988876531
Q ss_pred CCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHH
Q 011322 328 GQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 374 (488)
Q Consensus 328 ~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i 374 (488)
...++||++|||+..... .+..|..||..+|.+|
T Consensus 638 ----~~g~~v~aiGD~~~~~~~---------~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 638 ----DSGKTVHLIGGCDVAMEL---------DARRAIAQGTRLALEI 671 (671)
T ss_dssp ----TTTCCEEECGGGTCCSSC---------CHHHHHHHHHHHHHHC
T ss_pred ----hcCCCEEEECCcCccCch---------hHHHHHHHHHHHHHhC
Confidence 122689999999985421 4667999999999875
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.96 E-value=7.7e-29 Score=252.00 Aligned_cols=289 Identities=11% Similarity=0.080 Sum_probs=189.0
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC----CCCC-C----CCc---cc----cCC-------CC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP----YERP-A----LTK---GY----LFP-------LD 105 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~----~~~~-~----l~~---~~----~~~-------~~ 105 (488)
++.++|+|||||+||+++|..|++.|. ..+|+|+|+.+... |... . .+. .. +.. ..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~-~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKA-FDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTC-CSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCC-CCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 456899999999999999999999876 44899999986432 2110 0 000 00 000 00
Q ss_pred CCCC-----------CCCCcccccCCCC-------CCCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEeCC---Cc---
Q 011322 106 KKPA-----------RLPGFHTCVGSGG-------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNS---GK--- 159 (488)
Q Consensus 106 ~~~~-----------~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~v~~id~~~~--~v~~~~---g~--- 159 (488)
.... .+.++........ ...+.++.++.+..++++++|+.++.... +|++.+ |+
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 0000 0000000000000 00112233344667888899999987654 566655 66
Q ss_pred EEEeccEEecCCC--CCCcCCCCcCCC-----CCc-EEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCC
Q 011322 160 LLKYGSLIVATGC--TASRFPEKIGGY-----LPG-VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKL 231 (488)
Q Consensus 160 ~i~yd~lVlAtG~--~~~~~~~~~g~~-----~~~-v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~ 231 (488)
++.||+||+|||. .|. .|.++|.+ .++ +.+..++.+.. ...+++|+|||+|.+|+|+|..|++.+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~-~p~i~G~~~~~~~~~g~v~~~~~~~~~~-----~~~~k~VvVvG~G~sg~e~A~~l~~~~~ 236 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPY-IPNIKGLDEYAKAVPGSVLHSSLFREPE-----LFVGESVLVVGGASSANDLVRHLTPVAK 236 (447)
T ss_dssp EEEESEEEECCCSSSSBC-BCCCBTHHHHHHHSTTSEEEGGGCCCGG-----GGTTCCEEEECSSHHHHHHHHHHTTTSC
T ss_pred EEEeCEEEECCCCCCCCC-CCCCCChhhhhccCCccEEEecccCChh-----hcCCCEEEEEccCcCHHHHHHHHHHHhC
Confidence 7999999999998 443 44545532 122 44333222211 1258999999999999999999999999
Q ss_pred c-EEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcE-EEcCEEEEeecCcCCC
Q 011322 232 D-TTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST-IDADTIVIGIGAKPTV 309 (488)
Q Consensus 232 ~-vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~-i~~D~vi~a~G~~p~~ 309 (488)
+ |+++++.+.+ +++.||.+ +..|+++..+ ++ .|.++||++ +++|.||+|||++|+.
T Consensus 237 ~~V~l~~r~~~~----------------l~~~~i~~--~~~v~~~~~~-~~---~v~~~dG~~~~~~D~vi~atG~~~~~ 294 (447)
T 2gv8_A 237 HPIYQSLLGGGD----------------IQNESLQQ--VPEITKFDPT-TR---EIYLKGGKVLSNIDRVIYCTGYLYSV 294 (447)
T ss_dssp SSEEEECTTCCS----------------CBCSSEEE--ECCEEEEETT-TT---EEEETTTEEECCCSEEEECCCBCCCC
T ss_pred CcEEEEeCCCCc----------------CCCCCeEE--ecCeEEEecC-CC---EEEECCCCEeccCCEEEECCCCCcCC
Confidence 9 9999998765 33457774 4678888632 22 578899987 7999999999999999
Q ss_pred hh-----hHhc--CCcccCCCEEeCCCCC---CCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 011322 310 SP-----FERV--GLNSSVGGIQVDGQFR---TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 378 (488)
Q Consensus 310 ~~-----~~~~--gl~~~~g~i~vd~~~~---t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~~~ 378 (488)
++ ++++ ++.. ++.+.++.+.+ ++.|+||++||+.... .+..|..||+.+|+++.+..
T Consensus 295 ~~l~~~~l~~~~~~i~~-~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-----------~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 295 PFPSLAKLKSPETKLID-DGSHVHNVYQHIFYIPDPTLAFVGLALHVV-----------PFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp CCHHHHSCCSTTTCCCS-SSSSCCSEETTTEETTCTTEEESSCCBSSC-----------HHHHHHHHHHHHHHHHTTSS
T ss_pred CCCcccccccccCceec-CCCcccccccccccCCCCcEEEEecccccc-----------CchHHHHHHHHHHHHHcCCC
Confidence 88 6654 2333 24455555555 6899999999997632 45678999999999998743
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=1.2e-27 Score=247.22 Aligned_cols=300 Identities=17% Similarity=0.221 Sum_probs=190.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHH-HcCCCCCcEEEEcCCCCCCC-----CCCCCC-----ccccCCCCCC---CCCCCCcc
Q 011322 50 ENREFVIVGGGNAAGYAARTFV-EHGMADGRLCIVSKEAYAPY-----ERPALT-----KGYLFPLDKK---PARLPGFH 115 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~-~~g~~~~~V~lie~~~~~~~-----~~~~l~-----~~~~~~~~~~---~~~~~~~~ 115 (488)
+++||+|||||+||+++|..|+ +.|+ +|+|||+++.... ..|... ..+.+..... ...+...
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~---~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~- 82 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGL---TTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTT- 82 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---CEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBS-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCC---CEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCccc-
Confidence 3579999999999999999999 8776 8999999764321 111110 0000100000 0000000
Q ss_pred cccCCCCCCCCHhHHHHCCc--EEEeCCcEEEEeCCCc----EEEeCCCcEEEeccEEecCCC--CCCcCCCCcCCC-CC
Q 011322 116 TCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATGC--TASRFPEKIGGY-LP 186 (488)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~id~~~~----~v~~~~g~~i~yd~lVlAtG~--~~~~~~~~~g~~-~~ 186 (488)
.....+.........++.++ +++++++|++++.+.. +|++++|+++.||+||+|||. .|. .|.++|.+ ..
T Consensus 83 ~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~ 161 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN-FPNLPGLDTFE 161 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC-CCCCTTGGGCC
T ss_pred CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC-CCCCCCccccC
Confidence 00000001122344566787 7888999999987655 788899999999999999994 554 45555533 22
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccC----HHHHHHHH------
Q 011322 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFT----PSLAQRYE------ 256 (488)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~----~~~~~~~~------ 256 (488)
+.. +++.. ........+|+|+|||+|.+|+|+|..|++.+.+|++++|.+.++...++ +...+.++
T Consensus 162 g~~-~~~~~---~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~ 237 (540)
T 3gwf_A 162 GET-IHTAA---WPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRI 237 (540)
T ss_dssp SEE-EEGGG---CCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHH
T ss_pred CCE-EEeec---CCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHH
Confidence 321 11110 00112246899999999999999999999999999999999874221222 22211111
Q ss_pred -------------------------------------------------------------------HH-----------
Q 011322 257 -------------------------------------------------------------------QL----------- 258 (488)
Q Consensus 257 -------------------------------------------------------------------~~----------- 258 (488)
+.
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~ 317 (540)
T 3gwf_A 238 WERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETA 317 (540)
T ss_dssp HHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHH
T ss_pred HHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 00
Q ss_pred ----------------------HHHcCcEEEc--CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHh
Q 011322 259 ----------------------YQQNGVKFVK--GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER 314 (488)
Q Consensus 259 ----------------------l~~~GV~v~~--~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~ 314 (488)
+.+.+|+++. +..|++++++ +|.++||+++++|.||+|||++++..++..
T Consensus 318 ~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~------gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~ 391 (540)
T 3gwf_A 318 RKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK------GVVTEDGVLHELDVLVFATGFDAVDGNYRR 391 (540)
T ss_dssp HHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS------EEEETTCCEEECSEEEECCCBSCSSHHHHT
T ss_pred HhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC------eEEcCCCCEEECCEEEECCccCccccCcCc
Confidence 1134788885 6789999753 688999999999999999999998767766
Q ss_pred cCCcccCCCEEeCCC----------CCC-CCCCEEEE-ceecccCCccCCcccccccHHHHHHHHHHHHHHHh
Q 011322 315 VGLNSSVGGIQVDGQ----------FRT-RMPGIFAI-GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 375 (488)
Q Consensus 315 ~gl~~~~g~i~vd~~----------~~t-~~~~Iya~-GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~ 375 (488)
.++... +|+.+++. +.+ +.||+|.+ |+.+...+ ....+..|++.+++.|.
T Consensus 392 ~~i~g~-~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s----------~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 392 IEIRGR-DGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTN----------LPPSIETQVEWISDTIG 453 (540)
T ss_dssp SEEECG-GGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSC----------HHHHHHHHHHHHHHHHH
T ss_pred ceEECC-CCcCHHHhhccChhhccccccCCCCceEEEecCCCCCcc----------HHHHHHHHHHHHHHHHH
Confidence 554322 34444422 222 78999999 87654111 23446777888777663
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.93 E-value=3.5e-26 Score=236.67 Aligned_cols=307 Identities=16% Similarity=0.189 Sum_probs=182.8
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-----CCCCC----Cc---cccCCCCC-CCCCCCCcc
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-----ERPAL----TK---GYLFPLDK-KPARLPGFH 115 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-----~~~~l----~~---~~~~~~~~-~~~~~~~~~ 115 (488)
++++||||||||+||+++|..|++.|+ +|+|||+++.... ..|.. .. .+.+.... .........
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~---~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~ 83 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGM---KVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENF 83 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCC---CEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccC
Confidence 446799999999999999999999887 7999999865320 00110 00 00000000 000000000
Q ss_pred cccCCCCCCCCHhHHHHCCc--EEEeCCcEEEEeCCCc----EEEeCCCcEEEeccEEecCC--CCCCcCCCCcCCC-CC
Q 011322 116 TCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LP 186 (488)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~id~~~~----~v~~~~g~~i~yd~lVlAtG--~~~~~~~~~~g~~-~~ 186 (488)
..+.+...+.....++.++ .++++++|++++.+.. +|++++|+++.||+||+||| +.|. .|.++|.+ ..
T Consensus 84 -~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~-~p~ipG~~~f~ 161 (545)
T 3uox_A 84 -ASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR-MPDIKGIDSFK 161 (545)
T ss_dssp -CBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC----CCCTTGGGCC
T ss_pred -CCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc-CCCCCCccccC
Confidence 0000001112234455676 6888899999987654 88899999999999999999 6665 45555533 22
Q ss_pred cE--EEecCHHHHHHHH-HhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC-cccc---cCHHHHHHH----
Q 011322 187 GV--HYIRDVADADALI-SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-LQRL---FTPSLAQRY---- 255 (488)
Q Consensus 187 ~v--~~~~~~~~~~~~~-~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~-~~~~---~~~~~~~~~---- 255 (488)
+. ++.+...+..... .....+|+|+|||+|.+|+|+|..|++.+.+|+++.|.+.+ ++.. +++...+.+
T Consensus 162 g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~ 241 (545)
T 3uox_A 162 GESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRY 241 (545)
T ss_dssp SEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHHHTH
T ss_pred CCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHHhhh
Confidence 31 1111111000000 01236799999999999999999999999999999999874 3321 111111111
Q ss_pred --------------------------------------------------------------------------------
Q 011322 256 -------------------------------------------------------------------------------- 255 (488)
Q Consensus 256 -------------------------------------------------------------------------------- 255 (488)
T Consensus 242 p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~ 321 (545)
T 3uox_A 242 PTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPV 321 (545)
T ss_dssp HHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHH
T ss_pred HHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHH
Confidence
Q ss_pred -----------------------HHHHHHcCcEEEc--CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh
Q 011322 256 -----------------------EQLYQQNGVKFVK--GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 256 -----------------------~~~l~~~GV~v~~--~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
.+.|.+.+|+++. +..|++|+++ +|.++|| ++++|.||+|||+++++.
T Consensus 322 ~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~------gv~~~dG-~~~~D~IV~ATGf~~~~~ 394 (545)
T 3uox_A 322 VAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPE------GIKTADA-AYDLDVIIYATGFDAVTG 394 (545)
T ss_dssp HHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETT------EEEESSC-EEECSEEEECCCCBSSSC
T ss_pred HHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccC------eEEeCCC-eeecCEEEECCccccccc
Confidence 1112233788885 6789999853 6889999 999999999999998766
Q ss_pred hhHhcCCcccCCCEEeCCCC-----------CCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHh
Q 011322 311 PFERVGLNSSVGGIQVDGQF-----------RTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 375 (488)
Q Consensus 311 ~~~~~gl~~~~g~i~vd~~~-----------~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~ 375 (488)
++....+.. ++|+.+++.+ -.+.||+|.+. .|+...+. ......+..|++.+++.|.
T Consensus 395 ~~~~~~i~g-~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~----gp~~~~~~---~s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 395 SLDRIDIRG-KDNVRLIDAWAEGPSTYLGLQARGFPNFFTLV----GPHNGSTF---CNVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp SCTTSEEEC-GGGCBHHHHTTTSCCCBTTTBCTTCTTEEECS----SGGGTGGG---SCHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEC-CCCccHHHhhccccceeeccccCCCCcEEEEe----CCCCCCcc---ccHHHHHHHHHHHHHHHHH
Confidence 555443322 2344444221 12789999883 12211111 1123346678888877663
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.93 E-value=3.2e-25 Score=229.61 Aligned_cols=304 Identities=17% Similarity=0.202 Sum_probs=183.7
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC----C-CCCC----C-ccccCCCCCC---CCCCCCcc
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY----E-RPAL----T-KGYLFPLDKK---PARLPGFH 115 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~----~-~~~l----~-~~~~~~~~~~---~~~~~~~~ 115 (488)
+.+++|||||||+||+++|..|++.|+ +|+|||+++.... . .|.. . ..+.+..... ...+...
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~---~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~- 94 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGL---TVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEK- 94 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSS-
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCC---CEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccC-
Confidence 345799999999999999999999887 8999999764320 0 1111 0 0000000000 0000000
Q ss_pred cccCCCCCCCCHhHHHHCCc--EEEeCCcEEEEeCCCc----EEEeCCCcEEEeccEEecCC--CCCCcCCCCcCCC-CC
Q 011322 116 TCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LP 186 (488)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~id~~~~----~v~~~~g~~i~yd~lVlAtG--~~~~~~~~~~g~~-~~ 186 (488)
...+.+...+.....++.++ .++++++|++++.+.. +|++.+|+++.||+||+||| +.|. .|.++|.+ ..
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~ 173 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN-TPAFDGLDRFT 173 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC-CCCCTTGGGCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCC
Confidence 00000001112334566777 7888999999987665 88899999999999999999 6665 45556643 23
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHH------------
Q 011322 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR------------ 254 (488)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~------------ 254 (488)
+........+.+ .....+|+|+|||+|.+|+|+|..|++.+.+|++++|.+.++-...++.+...
T Consensus 174 g~~~~~~~~~~~---~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~~~~ 250 (549)
T 4ap3_A 174 GDIVHTARWPHD---GVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQKANYAER 250 (549)
T ss_dssp SEEEEGGGCCTT---CCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHHHTHHHH
T ss_pred CceEEecccccc---ccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHHhccHHH
Confidence 321111000000 11136899999999999999999999999999999999874221122111111
Q ss_pred ---------------------------------------------------------------HHHH-------------
Q 011322 255 ---------------------------------------------------------------YEQL------------- 258 (488)
Q Consensus 255 ---------------------------------------------------------------~~~~------------- 258 (488)
+++.
T Consensus 251 ~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~ 330 (549)
T 4ap3_A 251 RRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAEL 330 (549)
T ss_dssp HHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHH
T ss_pred HHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHh
Confidence 1111
Q ss_pred ----------------------HHHcCcEEE--cCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHh
Q 011322 259 ----------------------YQQNGVKFV--KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER 314 (488)
Q Consensus 259 ----------------------l~~~GV~v~--~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~ 314 (488)
+.+.+|+++ ....|++|+++ +|.++|| ++++|.||+|||++++..++..
T Consensus 331 l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~------gv~~~dG-~~~~D~iI~ATGf~~~~~~~~~ 403 (549)
T 4ap3_A 331 LTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDET------GIVTTGA-HYDLDMIVLATGFDAMTGSLDK 403 (549)
T ss_dssp HSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETT------EEEESSC-EEECSEEEECCCEEESSTTGGG
T ss_pred CCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCC------cEEeCCC-ceecCEEEECCcccccccccCc
Confidence 122378887 24678888853 6889999 9999999999999998756665
Q ss_pred cCCcccCCCEEeCCCCC-----------CCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHh
Q 011322 315 VGLNSSVGGIQVDGQFR-----------TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 375 (488)
Q Consensus 315 ~gl~~~~g~i~vd~~~~-----------t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~ 375 (488)
..+.. ++|+.+++.++ .+.||+|.+. .|+...+. ......+..|++.+++.|.
T Consensus 404 ~~i~g-~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~----Gp~~~~~~---~s~~~~~e~~~~~i~~~i~ 467 (549)
T 4ap3_A 404 LEIVG-RGGRTLKETWAAGPRTYLGLGIDGFPNFFNLT----GPGSPSVL---ANMVLHSELHVDWVADAIA 467 (549)
T ss_dssp SEEEC-GGGCBHHHHTTTSCCCBTTTBCTTCTTEEETT----CTTSCGGG---SCHHHHHHHHHHHHHHHHH
T ss_pred eeEEC-CCCcCHHHhhccchhhccccccCCCCcEEEEe----CCCCCCcC---ccHHHHHHHHHHHHHHHHH
Confidence 54432 34555553321 2678888852 12111111 1123346677777776653
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.92 E-value=2.3e-24 Score=223.87 Aligned_cols=303 Identities=16% Similarity=0.213 Sum_probs=183.2
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-----CCCCCC---ccccCCCCCCC-----CCCCCcc
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-----ERPALT---KGYLFPLDKKP-----ARLPGFH 115 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-----~~~~l~---~~~~~~~~~~~-----~~~~~~~ 115 (488)
+.++||+|||||++|+++|..|++.|+ +|+|+|+++.... ..|... ..........+ ..+...
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~---~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~- 89 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGR---SVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTER- 89 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBS-
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccc-
Confidence 345799999999999999999999987 8999999875420 001110 00000000000 000000
Q ss_pred cccCCCCCCCCHhHHHHCC--cEEEeCCcEEEEeCCC----cEEEeCCCcEEEeccEEecCCC--CCCcCCCCcCCC-CC
Q 011322 116 TCVGSGGERQTPEWYKEKG--IEMIYQDPVTSIDIEK----QTLITNSGKLLKYGSLIVATGC--TASRFPEKIGGY-LP 186 (488)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~--v~~~~~~~v~~id~~~----~~v~~~~g~~i~yd~lVlAtG~--~~~~~~~~~g~~-~~ 186 (488)
.....+...+.....++.+ .+++++++|++++.+. .+|++++|+++.||+||+|||. .+. .|.++|.+ ..
T Consensus 90 ~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~-~p~i~G~~~f~ 168 (542)
T 1w4x_A 90 YASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQ-LPNFPGLKDFA 168 (542)
T ss_dssp SCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCC-CCCCTTGGGCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCC
Confidence 0000000001112234444 5688899999987643 3688888988999999999995 443 45555532 33
Q ss_pred cEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc-ccc---cCHHHH----------
Q 011322 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-QRL---FTPSLA---------- 252 (488)
Q Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~-~~~---~~~~~~---------- 252 (488)
+..........+ .....+|+|+|||+|.+|+|++..+++.+.+|+++.|.+.+. ++. +.+...
T Consensus 169 G~~~hs~~~~~~---~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l 245 (542)
T 1w4x_A 169 GNLYHTGNWPHE---PVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEF 245 (542)
T ss_dssp SEEEEGGGCCSS---CCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHH
T ss_pred CceEECCCCCCc---hhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHH
Confidence 421111100000 011368999999999999999999999999999999987662 210 111110
Q ss_pred -------------------------------------------------------------HHHHHHH------------
Q 011322 253 -------------------------------------------------------------QRYEQLY------------ 259 (488)
Q Consensus 253 -------------------------------------------------------------~~~~~~l------------ 259 (488)
+.+++.+
T Consensus 246 ~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (542)
T 1w4x_A 246 REESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAER 325 (542)
T ss_dssp HHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHH
T ss_pred HHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHh
Confidence 0111111
Q ss_pred -----------------------HHcCcEEE--cCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHh
Q 011322 260 -----------------------QQNGVKFV--KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER 314 (488)
Q Consensus 260 -----------------------~~~GV~v~--~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~ 314 (488)
.+.+|+++ .+..|++++++ +|.++| +++++|.||+|||+++++.++..
T Consensus 326 l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~------gv~~~d-~~~~~D~ii~atG~~~~~~~~~~ 398 (542)
T 1w4x_A 326 LVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPR------GVRTSE-REYELDSLVLATGFDALTGALFK 398 (542)
T ss_dssp HSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSS------EEEESS-CEEECSEEEECCCCCCTTHHHHT
T ss_pred cCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCC------eEEeCC-eEEecCEEEEcCCccccccCcCc
Confidence 12346666 36678888642 688899 89999999999999998788776
Q ss_pred cCCcccCCCEEeCCCCC----------C-CCCCEEEE-ceecccCCccCCcccccccH-HHHHHHHHHHHHHHhc
Q 011322 315 VGLNSSVGGIQVDGQFR----------T-RMPGIFAI-GDVAAFPLKMYDRTARVEHV-DHARQSAQHCIKALLS 376 (488)
Q Consensus 315 ~gl~~~~g~i~vd~~~~----------t-~~~~Iya~-GD~a~~~~~~~~~~~~~~~~-~~A~~~g~~~a~~i~~ 376 (488)
.++... +++.+++.++ + +.||+|++ |+.+.. ...++ ..+..|++.++++|..
T Consensus 399 ~~i~g~-~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~---------~~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 399 IDIRGV-GNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPS---------ALSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp SEEECG-GGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSG---------GGSCHHHHHHHHHHHHHHHHHH
T ss_pred eeeECC-CCCCHHHhhcCchheecccccCCCCceEEEcCCCCCc---------ccccHHHHHHHHHHHHHHHHHH
Confidence 655443 3555554332 1 45666665 555421 12244 5788899999998864
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.88 E-value=9.3e-22 Score=174.22 Aligned_cols=153 Identities=22% Similarity=0.229 Sum_probs=130.4
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc--------cc-----CHHHHHHHHHHHHHcCcEEEcCCeEEEE
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR--------LF-----TPSLAQRYEQLYQQNGVKFVKGASIKNL 275 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~--------~~-----~~~~~~~~~~~l~~~GV~v~~~~~v~~i 275 (488)
+++|||+|++|+++|..|++.|.+|+++++.+.++.+ .+ ++++.+.+.+.+++.|++++.+ +++++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6899999999999999999999999999998866532 12 4678899999999999999999 99999
Q ss_pred EeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCccc
Q 011322 276 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 355 (488)
Q Consensus 276 ~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~ 355 (488)
+.++++ ..+.+++| ++++|.||+|+|..|+ +++.++++.++|.+.||++++|+.|+|||+|||+..+.+
T Consensus 82 ~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~~------ 150 (180)
T 2ywl_A 82 RDMGGV--FEVETEEG-VEKAERLLLCTHKDPT--LPSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVPG------ 150 (180)
T ss_dssp EECSSS--EEEECSSC-EEEEEEEEECCTTCCH--HHHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCSC------
T ss_pred EEcCCE--EEEEECCC-EEEECEEEECCCCCCC--ccccCCCCccCceEEeCCCCCcCCCCEEEeecccCcchh------
Confidence 865333 35788888 8999999999999984 567788887767788999999999999999999987542
Q ss_pred ccccHHHHHHHHHHHHHHHhc
Q 011322 356 RVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 356 ~~~~~~~A~~~g~~~a~~i~~ 376 (488)
.+..|..+|+.+|.+|.+
T Consensus 151 ---~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 151 ---HAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp ---CHHHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHhHHHHHHHHHH
Confidence 456789999999999975
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.82 E-value=1.3e-18 Score=178.60 Aligned_cols=292 Identities=17% Similarity=0.217 Sum_probs=161.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCC-----------CCcEEEEcCCCCCCCCCCCCCcc------ccCCCC--CCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMA-----------DGRLCIVSKEAYAPYERPALTKG------YLFPLD--KKPAR 110 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~-----------~~~V~lie~~~~~~~~~~~l~~~------~~~~~~--~~~~~ 110 (488)
..+||||||+||+||++|..|.+.+.+ ....+.+|+.+.+.++.-.+..+ ++.+.- ..|..
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s 117 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRS 117 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCC
Confidence 357999999999999999999986532 22567889887655442111110 000000 00000
Q ss_pred CCCcc-------------cc-----cCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCC----------cEEEeCCC----
Q 011322 111 LPGFH-------------TC-----VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEK----------QTLITNSG---- 158 (488)
Q Consensus 111 ~~~~~-------------~~-----~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~----------~~v~~~~g---- 158 (488)
.-.|. .. ...++..++....++.+..++++++|+++.+.. .+|++.++
T Consensus 118 ~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~ 197 (501)
T 4b63_A 118 SFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGE 197 (501)
T ss_dssp TTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCC
T ss_pred ccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCce
Confidence 00000 00 000000111112234466688899999986532 35666543
Q ss_pred -cEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHH-HHHHHhhhcCCeEEEECCcHHHHHHHHHHHhC--CCcEE
Q 011322 159 -KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADA-DALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLDTT 234 (488)
Q Consensus 159 -~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~--g~~vt 234 (488)
+++.++.||+|||..|. +|...+. .+.+.+.....+. +.+......+|+|+|||+|.+|+|++..|++. +.+|+
T Consensus 198 ~~~~~ar~vVlatG~~P~-iP~~~~~-~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~ 275 (501)
T 4b63_A 198 ISARRTRKVVIAIGGTAK-MPSGLPQ-DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTT 275 (501)
T ss_dssp EEEEEEEEEEECCCCEEC-CCTTSCC-CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEEeCEEEECcCCCCC-CCCCCCC-CcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEE
Confidence 35889999999998765 4433322 2344443332222 22222234789999999999999999999864 67899
Q ss_pred EEecCCCCccc--------ccCHHHHH-------------------------------HHHHH-HHH---------cCcE
Q 011322 235 IIFPENHLLQR--------LFTPSLAQ-------------------------------RYEQL-YQQ---------NGVK 265 (488)
Q Consensus 235 lv~~~~~~~~~--------~~~~~~~~-------------------------------~~~~~-l~~---------~GV~ 265 (488)
++.|++.+.+. .+.++..+ .+.+. +++ ....
T Consensus 276 ~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~ 355 (501)
T 4b63_A 276 LIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHR 355 (501)
T ss_dssp EECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSE
T ss_pred EEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCccccccee
Confidence 99998755432 11111111 11111 111 1124
Q ss_pred EEcCCeEEEEEeCCC-CcE-----------EEEEeCCCcEEEcCEEEEeecCcCCCh-hh-Hhc-CCc-ccCCCEEeCCC
Q 011322 266 FVKGASIKNLEAGSD-GRV-----------AAVKLEDGSTIDADTIVIGIGAKPTVS-PF-ERV-GLN-SSVGGIQVDGQ 329 (488)
Q Consensus 266 v~~~~~v~~i~~~~~-~~v-----------~~v~~~~g~~i~~D~vi~a~G~~p~~~-~~-~~~-gl~-~~~g~i~vd~~ 329 (488)
+..+..+..+..... +.+ .++.+.+|+++++|.||+|||++++.. ++ ..+ .+. ..+|.+.|+.+
T Consensus 356 l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rd 435 (501)
T 4b63_A 356 ILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRD 435 (501)
T ss_dssp EECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTT
T ss_pred ecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCC
Confidence 555666666553222 211 134567889999999999999998853 22 211 122 23567888876
Q ss_pred CCC--------CCCCEEEEcee
Q 011322 330 FRT--------RMPGIFAIGDV 343 (488)
Q Consensus 330 ~~t--------~~~~Iya~GD~ 343 (488)
++. ..++||+-|-+
T Consensus 436 y~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 436 YRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp SBBCCCTTTBCTTCEEEECSCC
T ss_pred cEEeecCCccCCCceEEecCCC
Confidence 553 23679999943
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.70 E-value=8e-20 Score=186.17 Aligned_cols=223 Identities=15% Similarity=0.098 Sum_probs=129.3
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEE---EeC-CCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHH---
Q 011322 129 WYKEKGIEMIYQDPVTSIDIEKQTL---ITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALI--- 201 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~~~~v---~~~-~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~--- 201 (488)
.+++.+++++.++.| ++..++..+ .+. ++.++.+|.+|+|||..+..++...+. ++ .+...+..+.+.-
T Consensus 128 ~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~~--~~-~tGdgi~~a~~aGa~~ 203 (472)
T 2e5v_A 128 LAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQ--ST-NIGDGMAIAFKAGTIL 203 (472)
T ss_dssp HHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSSC--TT-CSCHHHHHHHHTTCCE
T ss_pred HHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccCC--CC-CchHHHHHHHHcCCCE
Confidence 335679999999889 987665543 332 223478999999999987643321110 11 1110001111100
Q ss_pred ---HhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHH--------HHHHHHHHHHHcCcEEEcCC
Q 011322 202 ---SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPS--------LAQRYEQLYQQNGVKFVKGA 270 (488)
Q Consensus 202 ---~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~--------~~~~~~~~l~~~GV~v~~~~ 270 (488)
+..+...+++++|+| +++++..+...|..+ +..+.++++++ +++. +...+.+.+++.|. ++++.
T Consensus 204 ~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~-~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~ 278 (472)
T 2e5v_A 204 ADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFN-YDKRGELAPRDILSRAIYIEMLKGHK-VFIDL 278 (472)
T ss_dssp ECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGG-TCTTGGGSCHHHHHHHHHHHHHHTCC-EEEEC
T ss_pred eCCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCcc-CCcccCcCchhHHHHHHHHHHHhCCc-EEEec
Confidence 001111234455766 888888888888777 77888888865 3433 25566666666653 33221
Q ss_pred eEEEEEeCCCCcEEEEEeCCCcEEE-cCEEEEeecCcCCChhhHhcCC-cccCCCEEeCCCCCCCCCCEEEEceecccCC
Q 011322 271 SIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIGAKPTVSPFERVGL-NSSVGGIQVDGQFRTRMPGIFAIGDVAAFPL 348 (488)
Q Consensus 271 ~v~~i~~~~~~~v~~v~~~~g~~i~-~D~vi~a~G~~p~~~~~~~~gl-~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~ 348 (488)
+. + .. + .++++ .|.++++.|..|+ ++++-.+. ....|+|.||+++||++|||||+|||+....
T Consensus 279 ~~--~-----~~-----~--~~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~ 343 (472)
T 2e5v_A 279 SK--I-----ED-----F--ERKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGL 343 (472)
T ss_dssp TT--C-----TT-----H--HHHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSS
T ss_pred cc--h-----HH-----H--HHHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhccccc
Confidence 10 0 00 0 01233 4667788899998 55442211 1236899999999999999999999998322
Q ss_pred ccCCcccccccHHHHHHHHHHHHHHHhc
Q 011322 349 KMYDRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 349 ~~~~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
...++. ...++..+...|+.+++++.+
T Consensus 344 hg~~rl-~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 344 HGANRL-ASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp STTSCC-TTHHHHHHHHHHHHGGGTTTS
T ss_pred CCCCCC-CcccHHHHHHHHHHHHHHHHh
Confidence 111111 112345566778877777754
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.62 E-value=8e-15 Score=134.90 Aligned_cols=155 Identities=18% Similarity=0.239 Sum_probs=112.7
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCC-----------------CCcccccC-------HHHHHHHHHHHHHc-
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN-----------------HLLQRLFT-------PSLAQRYEQLYQQN- 262 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~-----------------~~~~~~~~-------~~~~~~~~~~l~~~- 262 (488)
.+|+|||+|+.|+++|..|++.|.+|+++++.. .++.. ++ ..+.+.+.+.+++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~-~~d~~g~~~~~~~~~l~~~~~~~~ 82 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLER-AYDPKDERVWAFHARAKYLLEGLR 82 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHH-HCCTTCCCHHHHHHHHHHHHHTCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhh-hccCCCCCHHHHHHHHHHHHHcCC
Confidence 469999999999999999999999999999872 11111 11 26677788888887
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC--------------------Chh---hHhcCCcc
Q 011322 263 GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT--------------------VSP---FERVGLNS 319 (488)
Q Consensus 263 GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~--------------------~~~---~~~~gl~~ 319 (488)
|++++ +++++++..+ ++.+..+.+.+|+++++|.||+|+|..++ ..+ +++.++..
T Consensus 83 gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~ 160 (232)
T 2cul_A 83 PLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRF 160 (232)
T ss_dssp TEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCE
T ss_pred CcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeE
Confidence 99999 5689999864 45566788889988999999999999443 223 33455544
Q ss_pred cCCC----------------EEeCC-------CCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011322 320 SVGG----------------IQVDG-------QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 320 ~~g~----------------i~vd~-------~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
.++. ..... ...|++|||||+|||+ ... .+..+.+||+.+|.+|+.
T Consensus 161 ~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g----------~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 161 VEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG----------DYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp EEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC----------CHHHHHHHHHHHHHHHHH
T ss_pred EccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc----------cHHHHHHHHHHHHHHHHh
Confidence 3211 00110 1126899999999999 432 455688999999999874
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.56 E-value=9.1e-18 Score=163.07 Aligned_cols=257 Identities=14% Similarity=0.056 Sum_probs=139.0
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQT 126 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (488)
...+||+||||||||++||.+|+++ |+ +|+|||+++..... ....++..+ ... .....
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~---~V~viEk~~~~GG~--~~~~~~~~~-----~~~----------l~~~~ 122 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDL---KVCIIESSVAPGGG--SWLGGQLFS-----AMV----------MRKPA 122 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSSSCCTT--TTCCSTTCC-----CEE----------EETTT
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCC---eEEEEECCCCCCce--EEeCCccCC-----HHH----------HHHHH
Confidence 3467999999999999999999764 65 89999998764322 111111111 000 01234
Q ss_pred HhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhc
Q 011322 127 PEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 206 (488)
Q Consensus 127 ~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~ 206 (488)
...+++.++++..+... ....+.++++++..+.. +..++........... +.........
T Consensus 123 ~~~~~e~Gv~~~~~~~~----------------~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~---~~~~~~~~~~ 182 (326)
T 3fpz_A 123 HLFLQELEIPYEDEGDY----------------VVVKHAALFISTVLSKV-LQLPNVKLFNATCVED---LVTRPPTEKG 182 (326)
T ss_dssp HHHHHHTTCCCEECSSE----------------EEESCHHHHHHHHHHHH-HTSTTEEEETTEEEEE---EEEESSCSSS
T ss_pred HHHHHHcCCEEEECCcc----------------eecceeEEEEcchhhhc-cccccceeecccccce---eeccCCcccC
Confidence 56677788877654321 12334445555544432 2222221111000000 0000112345
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 286 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v 286 (488)
+++++++|+|.++++.|..+...+.+++++.+......... +... .. .+.... ..++.. .
T Consensus 183 ~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~-----------~~~~-~~-----~~~~~~-g~~~~~--~ 242 (326)
T 3fpz_A 183 EVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRD-----------LSQK-HG-----VILSTT-GHDGPF--G 242 (326)
T ss_dssp SCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBC-----------TTSC-CC-----EEEECC-CSCSSS--C
T ss_pred CCEEEEEccCceeeehhhhhhhccCcEEEEeeccccccccc-----------ceee-cc-----eEEEEe-cceeeE--e
Confidence 78999999999999999999999999998877654332110 0000 00 111111 111100 0
Q ss_pred EeCCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCCCCCCCCCCEEEEceecccCCccCCcccccccHHHHHHH
Q 011322 287 KLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQS 366 (488)
Q Consensus 287 ~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~ 366 (488)
.......+.+|.+..+.|.++.... ...+.|.+|+.++|++|+|||+||++....... +..+ .+..++..
T Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~~-------~~e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~-rmGp--~~g~mi~S 312 (326)
T 3fpz_A 243 AFCAKRIVDIDQNQKLGGMKGLDMN-------HAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN-RMGP--TFGAMALS 312 (326)
T ss_dssp SHHHHHHHHHCTTCCCCCCCCBCHH-------HHHHHHHHHCEECTTSBTEEECTHHHHHHHTCC-BCCS--CCHHHHHH
T ss_pred ecceeEEEecCceeeecceeccccc-------ccCCeEEECCCeEECCCCEEEEchHhccccCCC-cCch--HHHHHHHH
Confidence 0001123566777777777764322 223567788889999999999999986422111 0000 12234456
Q ss_pred HHHHHHHHh
Q 011322 367 AQHCIKALL 375 (488)
Q Consensus 367 g~~~a~~i~ 375 (488)
|+.||+.|+
T Consensus 313 G~~AAe~I~ 321 (326)
T 3fpz_A 313 GVHAAEQIL 321 (326)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777765
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.49 E-value=1.1e-15 Score=152.18 Aligned_cols=122 Identities=19% Similarity=0.166 Sum_probs=73.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-------CCCCCCc------cccCCCCCCCCC------
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------ERPALTK------GYLFPLDKKPAR------ 110 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-------~~~~l~~------~~~~~~~~~~~~------ 110 (488)
+++||+|||||++|+++|..|++.|. +|+|+|+.+.... .+..+.. .++.........
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~---~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGK---SVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYT 79 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCC---CEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCC
Confidence 35899999999999999999999987 8999999875310 0111100 001000000000
Q ss_pred ---------CCCcccc-----------cCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCC----C--cEEEeCCCcEEEec
Q 011322 111 ---------LPGFHTC-----------VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIE----K--QTLITNSGKLLKYG 164 (488)
Q Consensus 111 ---------~~~~~~~-----------~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~----~--~~v~~~~g~~i~yd 164 (488)
-.+.... ........+.+.+++.+++++.+++|+++..+ . ..|++.++ ++.+|
T Consensus 80 ~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad 158 (401)
T 2gqf_A 80 NWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCK 158 (401)
T ss_dssp HHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEES
T ss_pred HHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECC
Confidence 0000000 00000011233445679999999999998754 2 35666666 69999
Q ss_pred cEEecCCCCCC
Q 011322 165 SLIVATGCTAS 175 (488)
Q Consensus 165 ~lVlAtG~~~~ 175 (488)
+||+|||..+.
T Consensus 159 ~VVlAtG~~s~ 169 (401)
T 2gqf_A 159 NLIVATGGLSM 169 (401)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999998873
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.22 E-value=2.6e-12 Score=129.46 Aligned_cols=95 Identities=17% Similarity=0.266 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeec--------CcCCChhhHh--cCC
Q 011322 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--------AKPTVSPFER--VGL 317 (488)
Q Consensus 248 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G--------~~p~~~~~~~--~gl 317 (488)
+..+...+...+++.| ++++++.|++|+..++ .+ .|.+.+|+++.+|.||+|+| +.|+.+..+. .+.
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~ 279 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGD-VV-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE 279 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSS-SE-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCC-eE-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh
Confidence 4445666777777778 9999999999986543 34 58888998899999999999 8888765332 111
Q ss_pred cccCCCEEeCCCCCCCCCCEEEEceecc
Q 011322 318 NSSVGGIQVDGQFRTRMPGIFAIGDVAA 345 (488)
Q Consensus 318 ~~~~g~i~vd~~~~t~~~~Iya~GD~a~ 345 (488)
......++|+..++++.+++|+.||+..
T Consensus 280 ~~~~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 280 GHGGQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp CCCCCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred CCCcceEEEEEEECCCCcCceEcCCCCE
Confidence 1223459999999999999999999843
No 100
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.21 E-value=5.1e-11 Score=112.87 Aligned_cols=164 Identities=17% Similarity=0.175 Sum_probs=110.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhC-CCcEEEEecCCCCcccc-------------------------------------cCH
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHLLQRL-------------------------------------FTP 249 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~-g~~vtlv~~~~~~~~~~-------------------------------------~~~ 249 (488)
..|+|||+|++|+.+|..|++. |.+|+++++.+.+.... ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 99999999886542100 113
Q ss_pred HHHHHHHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEEeC---------CC-----cEEEcCEEEEeecCcCCChh---
Q 011322 250 SLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLE---------DG-----STIDADTIVIGIGAKPTVSP--- 311 (488)
Q Consensus 250 ~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~~~v~~v~~~---------~g-----~~i~~D~vi~a~G~~p~~~~--- 311 (488)
.+...+.+.+.+ .|+++++++.++++..+ ++.+..+.+. +| .++++|.||+|+|..+....
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHH
Confidence 344455566655 69999999999999854 4555556542 32 57999999999998876431
Q ss_pred --hHhcC----CcccCCCEEeCC-------CCCCCCCCEEEEceecccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011322 312 --FERVG----LNSSVGGIQVDG-------QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 376 (488)
Q Consensus 312 --~~~~g----l~~~~g~i~vd~-------~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~i~~ 376 (488)
+...+ +... .++.+|. +.+++.|++|++||++... ++.......+..+..+|+.+|.++..
T Consensus 199 ~~~~~~g~~~~v~~~-~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~---~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 199 KRLKSIGMIDHVPGM-KALDMNTAEDAIVRLTREVVPGMIVTGMEVAEI---DGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHHTTSSSCCCCC-EEECHHHHHHHHHHHCEEEETTEEECTHHHHHH---HTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCcCCc-CCchhhhhhHHHhhccccccCCEEEEeeehhhh---cCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 22222 2212 2343332 3456779999999987531 11111112456678889999988865
No 101
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.12 E-value=1.3e-10 Score=102.03 Aligned_cols=107 Identities=18% Similarity=0.202 Sum_probs=73.5
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCccc-ccCCCCCCCCHhHH
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPEWY 130 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 130 (488)
++|+|||||++|+.+|..|++.|. +|+|+|+.+........+ ..+++++. ..+........+.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~---~v~lie~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~ 66 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGL---KVLVLDGGRSKVKGVSRV------------PNYPGLLDEPSGEELLRRLEAHA 66 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCTTTTCSCC------------CCSTTCTTCCCHHHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCcccCchhh------------hccCCCcCCCCHHHHHHHHHHHH
Confidence 689999999999999999999987 899999987432110000 01111100 00000112234556
Q ss_pred HHCCcEEEeCCcEEEEeCCC--cEEEeCCCcEEEeccEEecCCCCCC
Q 011322 131 KEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~--~~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
++.+++++.+ +|++++.+. ..+++++| ++.+|.||+|+|..+.
T Consensus 67 ~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 67 RRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp HHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH
T ss_pred HHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC
Confidence 7789999998 999998653 36777788 7999999999998863
No 102
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.11 E-value=8.2e-11 Score=122.95 Aligned_cols=36 Identities=25% Similarity=0.360 Sum_probs=31.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
.+||||||||+||++||..|++.|. +.+|+|||+.+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~-~~~V~vlEk~~ 40 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANP-NAKIALISKVY 40 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCT-TCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCC-CCcEEEEeCCC
Confidence 5799999999999999999999982 23899999975
No 103
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.06 E-value=2.5e-11 Score=124.18 Aligned_cols=169 Identities=14% Similarity=-0.048 Sum_probs=98.5
Q ss_pred ccccccceeeccccc---CCCCcccccc-cccccccccccccc------------------cccccCCCCCeEEEEcCch
Q 011322 4 VSNSLSFKHGLSLWC---PQSPSLHRIR-HSSAKNFQRRGFVV------------------AYSSFANENREFVIVGGGN 61 (488)
Q Consensus 4 ~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~------------------~~~~~~~~~~~vvIIGgG~ 61 (488)
.+||++.+||.+|.. .|...|.+.. .++.++...++... .........++|+|||||+
T Consensus 23 ~~~~~~~~~~rvc~~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~ 102 (497)
T 2bry_A 23 ETFVQAQLCQDVLSSFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGP 102 (497)
T ss_dssp HHHHHCCSHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSH
T ss_pred HhCCCHHHHHHHHHHHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccH
Confidence 579999999999986 5777777744 22222222121111 0011134568999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCCcc---ccCCCC----CCCCCCCCcccccCCCCCCCCHhHHHHC
Q 011322 62 AAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTKG---YLFPLD----KKPARLPGFHTCVGSGGERQTPEWYKEK 133 (488)
Q Consensus 62 AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~-~l~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (488)
+|+++|..|++.|. +|+|||+.+.....+. .+... .+.... ........+...........+.+.+++.
T Consensus 103 aGl~aA~~La~~G~---~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 179 (497)
T 2bry_A 103 CGLRAAVELALLGA---RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLL 179 (497)
T ss_dssp HHHHHHHHHHHTTC---EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCC---eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhC
Confidence 99999999999987 8999999875421100 00000 000000 0000000000000000001123444567
Q ss_pred CcEEEeCCcEEEEeCC-----CcEEEe--C-CC--cEEEeccEEecCCCCCC
Q 011322 134 GIEMIYQDPVTSIDIE-----KQTLIT--N-SG--KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 134 ~v~~~~~~~v~~id~~-----~~~v~~--~-~g--~~i~yd~lVlAtG~~~~ 175 (488)
+++++.+++|+++..+ ...|++ . +| .++.+|+||+|+|..+.
T Consensus 180 gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 180 GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 9999999999999863 236666 3 56 46899999999998764
No 104
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.01 E-value=2e-09 Score=110.99 Aligned_cols=160 Identities=18% Similarity=0.132 Sum_probs=91.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC-CCCCCCCCCCccccCCCC--CCCCCCCC------------c
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA-YAPYERPALTKGYLFPLD--KKPARLPG------------F 114 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~------------~ 114 (488)
..+||+|||||+||++||..|++.|. +|+|||+.+ ......+..+.+...... .....+.+ +
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~---kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGA---KTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---CEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 35899999999999999999999987 899999974 221110100000000000 00000000 0
Q ss_pred cc---ccCC------------CCCCCCHhHHHH-CCcEEEeCCcEEEEeCCCc---EEEeCCCcEEEeccEEecCCCCCC
Q 011322 115 HT---CVGS------------GGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 115 ~~---~~~~------------~~~~~~~~~~~~-~~v~~~~~~~v~~id~~~~---~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
.. ..+. .+...+.+.+++ .+++++ +++|+++..++. .|.+.+|..+.+|.||+|||..+.
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 00 0000 000111233444 489985 579999876544 367788888999999999998765
Q ss_pred cCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEe
Q 011322 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIF 237 (488)
Q Consensus 176 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~ 237 (488)
. +..+| ...+. ..+ .|+.++.+++..|.+.|.++..+.
T Consensus 182 ~-~~~~G-----~~~~~--------------~Gr----~G~~~A~~la~~L~~lG~~v~~l~ 219 (637)
T 2zxi_A 182 G-VIYIG-----DKMIP--------------GGR----LGEPRSEGLSDFYRRFDFPLIRFK 219 (637)
T ss_dssp C-EEEET-----TEEEE--------------CSB----TTBCCBCTHHHHHHHTTCCCEEEE
T ss_pred C-ceecc-----ceecC--------------CCC----CCchhHHHHHHHHHhcCCceEEec
Confidence 2 22222 22211 122 235677889999999888765543
No 105
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.97 E-value=3.2e-09 Score=104.11 Aligned_cols=68 Identities=13% Similarity=0.269 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEeecCcCCChhhHhc-CC
Q 011322 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERV-GL 317 (488)
Q Consensus 248 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~~~~~~-gl 317 (488)
+..+...+.+.+++.|++++++++|++++.++++.+ .|.+.+| .++.+|.||+|+|.... .+++.+ |+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s~-~l~~~~~g~ 219 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHAP-GLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGHH-HHHHTEETS
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcchH-HHHHHhcCC
Confidence 346778888889999999999999999987644434 4788888 47999999999998753 566666 54
No 106
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.94 E-value=3.8e-10 Score=115.42 Aligned_cols=147 Identities=15% Similarity=0.119 Sum_probs=102.4
Q ss_pred EeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHH---------HHh--hhcCCeEEEECCcHHHHHHHHHHHhCC
Q 011322 162 KYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL---------ISS--LEKAKKVVVVGGGYIGMEVAAAAVGWK 230 (488)
Q Consensus 162 ~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~---------~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g 230 (488)
.||++++++|+.+.. +++++..++++.......+..++ ... .....+|+|||||+.|+.+|..|++.|
T Consensus 37 ~~~~l~~~~g~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G 115 (497)
T 2bry_A 37 SFQGLCRALGVESGG-GLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLG 115 (497)
T ss_dssp HHHHHHHHHTCCTTC-HHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCC-CcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCC
Confidence 478899999998653 33333233344444444444433 111 123568999999999999999999999
Q ss_pred CcEEEEecCCCCccc----cc----------------------------CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeC
Q 011322 231 LDTTIIFPENHLLQR----LF----------------------------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAG 278 (488)
Q Consensus 231 ~~vtlv~~~~~~~~~----~~----------------------------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~ 278 (488)
.+|+++++.+.+... .. ...+.+.+.+.+++.|+++++++++++++.+
T Consensus 116 ~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~ 195 (497)
T 2bry_A 116 ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPP 195 (497)
T ss_dssp CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECC
T ss_pred CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEe
Confidence 999999988654210 00 0456667778888899999999999999853
Q ss_pred C-CCcEEEEEe--C-CC--cEEEcCEEEEeecCcCCC
Q 011322 279 S-DGRVAAVKL--E-DG--STIDADTIVIGIGAKPTV 309 (488)
Q Consensus 279 ~-~~~v~~v~~--~-~g--~~i~~D~vi~a~G~~p~~ 309 (488)
+ ++....|.+ . +| +++.+|.||.|+|..+..
T Consensus 196 ~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 196 PRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp CSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred cCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 2 222234555 4 66 579999999999998765
No 107
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.93 E-value=1.4e-09 Score=111.66 Aligned_cols=57 Identities=25% Similarity=0.365 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 249 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
..+.+.+.+.+++.|++|++++.|++|..+ ++++++|+++||+++.||.||++++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 467788888999999999999999999864 677888999999999999999987754
No 108
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.93 E-value=8.7e-10 Score=109.96 Aligned_cols=124 Identities=20% Similarity=0.269 Sum_probs=72.6
Q ss_pred cCCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-------CCCCC------ccccCCCCCCC-----
Q 011322 47 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-------RPALT------KGYLFPLDKKP----- 108 (488)
Q Consensus 47 ~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~-------~~~l~------~~~~~~~~~~~----- 108 (488)
|+++++||+|||||+||++||..|++.|. +|+|+|+.+..... +..+. ..+........
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~---~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~ 99 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGR---RVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALA 99 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHH
Confidence 45567899999999999999999999987 89999998753210 00000 00000000000
Q ss_pred -------------------CCCCCcccccC--CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEecc
Q 011322 109 -------------------ARLPGFHTCVG--SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGS 165 (488)
Q Consensus 109 -------------------~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~ 165 (488)
....+...... ......+.+.+++.+++++.+++|+++..++. .|.+.+| ++.+|+
T Consensus 100 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~ 178 (417)
T 3v76_A 100 RYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAAS 178 (417)
T ss_dssp HSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESE
T ss_pred hcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeE
Confidence 00000000000 00001122344567999999999999976543 5667777 799999
Q ss_pred EEecCCCCC
Q 011322 166 LIVATGCTA 174 (488)
Q Consensus 166 lVlAtG~~~ 174 (488)
||+|||..+
T Consensus 179 VIlAtG~~S 187 (417)
T 3v76_A 179 LVVASGGKS 187 (417)
T ss_dssp EEECCCCSS
T ss_pred EEECCCCcc
Confidence 999999875
No 109
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.91 E-value=2.1e-12 Score=135.36 Aligned_cols=67 Identities=12% Similarity=0.223 Sum_probs=50.3
Q ss_pred HHcCcEEEcCCeEEEEEeCCC-CcEEEEEeC---CCc--EEEcCEEEEeecCcCCChhhHhcCCcc----cCCCEEe
Q 011322 260 QQNGVKFVKGASIKNLEAGSD-GRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNS----SVGGIQV 326 (488)
Q Consensus 260 ~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~~----~~g~i~v 326 (488)
++.|+++++++.|+++..+++ +++.+|++. +|+ ++.+|.||+|+|..++..++..+|+.. ...+|.+
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~ 347 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE 347 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCccccccccCCCC
Confidence 345899999999999986433 367777764 354 688999999999999988888776632 2345555
No 110
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.90 E-value=2.3e-09 Score=98.15 Aligned_cols=117 Identities=15% Similarity=0.165 Sum_probs=71.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCC-CCcccccCC---CCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARL-PGFHTCVGS---GGERQ 125 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~ 125 (488)
+++||+|||||++|+++|..|++.|. +|+|||+...... .+ ... ...... ...+ ..+.+..+. .....
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~---~v~lie~~~~~~G-~~-~~~-~~~~~~--~~~~~~~~~d~~g~~~~~~~~~ 73 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGV---RVGLLTQSLDAVM-MP-FLP-PKPPFP--PGSLLERAYDPKDERVWAFHAR 73 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTT-CC-SSC-CCSCCC--TTCHHHHHCCTTCCCHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCCCcCC-cc-cCc-cccccc--hhhHHhhhccCCCCCHHHHHHH
Confidence 46899999999999999999999987 8999999732111 00 000 000000 0000 000000000 00011
Q ss_pred CHhHHHHC-CcEEEeCCcEEEEeCCCc---EEEeCCCcEEEeccEEecCCCCCC
Q 011322 126 TPEWYKEK-GIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 126 ~~~~~~~~-~v~~~~~~~v~~id~~~~---~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+.+.+++. +++++. ++|+++..++. .+.+.+|+++.+|+||+|||....
T Consensus 74 l~~~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 74 AKYLLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 23444555 899885 69999986543 366778888999999999998643
No 111
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.88 E-value=2e-09 Score=111.39 Aligned_cols=160 Identities=14% Similarity=0.151 Sum_probs=89.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC-CCCCCCCCCccccCCCC--CCCCCCCC------------c
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY-APYERPALTKGYLFPLD--KKPARLPG------------F 114 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~-~~~~~~~l~~~~~~~~~--~~~~~~~~------------~ 114 (488)
..+||||||||+||++||..|++.|. +|+|||+.+. ........+.+...... .....+.+ +
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQ---QTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCC---CEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 46899999999999999999999987 8999998742 21110100000000000 00000000 0
Q ss_pred ccc---cCC------------CCCCCCHhHHHH-CCcEEEeCCcEEEEeCCCc---EEEeCCCcEEEeccEEecCCCCCC
Q 011322 115 HTC---VGS------------GGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 115 ~~~---~~~------------~~~~~~~~~~~~-~~v~~~~~~~v~~id~~~~---~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
... .+. .+...+.+.+++ .+++++ +++|+.+..++. .|.+.+|.++.+|.||+|||+.+.
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 000 000 000011233444 589985 579999976543 467778888999999999998765
Q ss_pred cCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEe
Q 011322 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIF 237 (488)
Q Consensus 176 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~ 237 (488)
. +. .+|...+ .+.+ +| +.++++++..|.+.|.+|+.+.
T Consensus 183 ~-~~-----i~G~~~~--------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 183 G-KI-----HIGLDNY--------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp C-EE-----ECC-------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred C-cc-----ccCcccC--------------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 2 22 2222211 1222 46 7889999999999999988774
No 112
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.85 E-value=2.7e-09 Score=105.44 Aligned_cols=121 Identities=16% Similarity=0.151 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---------------CCccccCCCCCCCCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---------------LTKGYLFPLDKKPARLPG 113 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~---------------l~~~~~~~~~~~~~~~~~ 113 (488)
+++++|+|||||++|+++|..|++.|. +|+|+|+.+........ +...+.. .......+ .
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~---~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~-~~~~~~~~-~ 83 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGW---DVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQ-GSHTPPTY-E 83 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHT-TCBCCSCE-E
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHh-hCCCccce-E
Confidence 346899999999999999999999987 89999998654211000 0000000 00000000 0
Q ss_pred cccc-------c--CC--------CCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCC
Q 011322 114 FHTC-------V--GS--------GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 114 ~~~~-------~--~~--------~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+... . +. .....+.+.+.+.+++++.+++|++++.+. .|++.+|+++.+|.||.|+|....
T Consensus 84 ~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 84 TWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCH
T ss_pred EEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHH
Confidence 0000 0 00 000112234456799999999999998755 888889989999999999998653
No 113
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.83 E-value=8.4e-09 Score=105.84 Aligned_cols=124 Identities=18% Similarity=0.222 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC--------------CCC---CCCC-cc-ccCCCCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--------------YER---PALT-KG-YLFPLDKKPA 109 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~--------------~~~---~~l~-~~-~~~~~~~~~~ 109 (488)
...+||+|||||++|+++|..|++.|+ +|+|+|+.+... ... .... .+ ..+.......
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~---kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~ 181 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGF---NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYS 181 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTC---CCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---eEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEE
Confidence 345899999999999999999999987 899999985320 000 0000 00 0000000000
Q ss_pred CCCC--c--------------cc---ccCC---------CCCCCCHhHHHHCCcEEEeCCcEEEEeCCCc---EEEeCCC
Q 011322 110 RLPG--F--------------HT---CVGS---------GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSG 158 (488)
Q Consensus 110 ~~~~--~--------------~~---~~~~---------~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~---~v~~~~g 158 (488)
.+.. . .. .... .....+.+.+++.+++++++++|+++..++. .|++.+|
T Consensus 182 ~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G 261 (549)
T 3nlc_A 182 QVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG 261 (549)
T ss_dssp CSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTS
T ss_pred EeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCC
Confidence 0000 0 00 0000 0000122344567999999999999987653 4778889
Q ss_pred cEEEeccEEecCCCCCC
Q 011322 159 KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 159 ~~i~yd~lVlAtG~~~~ 175 (488)
+++.+|.||+|+|..+.
T Consensus 262 ~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 262 EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp CEEECSCEEECCCTTCH
T ss_pred CEEECCEEEECCCCChh
Confidence 89999999999998763
No 114
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.82 E-value=4.5e-08 Score=97.93 Aligned_cols=67 Identities=15% Similarity=0.188 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc--EEEcCEEEEeecCcCCChhhHhcCCc
Q 011322 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS--TIDADTIVIGIGAKPTVSPFERVGLN 318 (488)
Q Consensus 250 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~--~i~~D~vi~a~G~~p~~~~~~~~gl~ 318 (488)
.+...+.+.+++.|++++.+++|++++..+++....+.+.+|+ ++.+|.||.|+|..+ .+.+.+++.
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s--~l~~~~g~~ 175 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR--VIPRMFGLD 175 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC--HHHHHTTCE
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch--hhHHhcCCC
Confidence 4556677777788999999999999987655554567778888 799999999999876 344445544
No 115
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.80 E-value=2e-08 Score=104.16 Aligned_cols=59 Identities=20% Similarity=0.377 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHc-CcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 249 PSLAQRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 249 ~~~~~~~~~~l~~~-GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
..+.+.+.+.+++. ||+++.+ +|+++...+++.+..|.+.+|+++.+|.||.|+|....
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 35777888888888 9999999 99999876566667888999988999999999998765
No 116
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.80 E-value=1.4e-07 Score=100.52 Aligned_cols=58 Identities=16% Similarity=0.220 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc-EEEcCEEEEeecCcCC
Q 011322 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVIGIGAKPT 308 (488)
Q Consensus 249 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~-~i~~D~vi~a~G~~p~ 308 (488)
..+...+.+.+++.|++++++++|+++..++++ + .|.+.+|+ ++.+|.||+|+|....
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-W-QLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-E-EEEEC-CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-E-EEEeCCCcEEEECCEEEECCCcchh
Confidence 467778888888999999999999999875444 3 67888887 8999999999998743
No 117
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.78 E-value=7.7e-09 Score=104.44 Aligned_cols=123 Identities=20% Similarity=0.302 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-------CCCCCCc-----ccc--CCCCCC-CC----
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------ERPALTK-----GYL--FPLDKK-PA---- 109 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-------~~~~l~~-----~~~--~~~~~~-~~---- 109 (488)
.+++||+|||||+||+++|..|++.|. +|+|+|+.+...- .+..+.. .++ ...... ..
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~---~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGA---NVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFS 100 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCC---CEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHH
Confidence 345899999999999999999999987 8999999864310 0000000 000 000000 00
Q ss_pred CC-----------CCccc---ccC---------CCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCc---EEEeCCCcEEEe
Q 011322 110 RL-----------PGFHT---CVG---------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKY 163 (488)
Q Consensus 110 ~~-----------~~~~~---~~~---------~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~---~v~~~~g~~i~y 163 (488)
.+ .+... ..+ ......+.+.+++.+++++.+++|+++..++. .|++.+|+++.+
T Consensus 101 ~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~A 180 (447)
T 2i0z_A 101 IFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLET 180 (447)
T ss_dssp HSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEEC
T ss_pred hcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEEC
Confidence 00 00000 000 00001122344567999999999999975443 477788878999
Q ss_pred ccEEecCCCCC
Q 011322 164 GSLIVATGCTA 174 (488)
Q Consensus 164 d~lVlAtG~~~ 174 (488)
|.||+|||...
T Consensus 181 d~VVlAtGg~s 191 (447)
T 2i0z_A 181 NHVVIAVGGKS 191 (447)
T ss_dssp SCEEECCCCSS
T ss_pred CEEEECCCCCc
Confidence 99999999876
No 118
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.78 E-value=9e-08 Score=95.14 Aligned_cols=65 Identities=18% Similarity=0.301 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcC
Q 011322 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 316 (488)
Q Consensus 249 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~g 316 (488)
..+...+.+.+++.|++++.+++|+++..+ ++.+..|.+.+| ++.+|.||+|+|.... .+.+..+
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~-~l~~~~g 238 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSS-VLAEMAG 238 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHH-HHHHHHT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHH-HHHHHcC
Confidence 367778888889999999999999999865 455667888888 6999999999998653 3444444
No 119
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.76 E-value=1e-08 Score=105.71 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=40.8
Q ss_pred HHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 252 AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 252 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
........++.|+++++++.|++|+.. ++.+ .|.+.+|+++.+|.||++++..
T Consensus 215 ~~l~~~l~~~lg~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 215 GQVSERIMDLLGDRVKLERPVIYIDQT-RENV-LVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHHHHGGGEESSCCEEEEECS-SSSE-EEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHHHHcCCcEEcCCeeEEEEEC-CCeE-EEEECCCeEEEeCEEEECCCHH
Confidence 344444445558999999999999865 3445 4888899999999999998864
No 120
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.76 E-value=1.4e-07 Score=98.08 Aligned_cols=61 Identities=20% Similarity=0.250 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeC--CCc--EEEcCEEEEeecCcCC
Q 011322 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPT 308 (488)
Q Consensus 248 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~--~g~--~i~~D~vi~a~G~~p~ 308 (488)
...+...+.+.+++.||++++++.++++..++++++.+|.+. +|+ ++.+|.||+|+|..+.
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 346777888888999999999999999976533677677665 664 6899999999997653
No 121
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.74 E-value=2.4e-07 Score=98.56 Aligned_cols=58 Identities=14% Similarity=0.218 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 249 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
..+...+.+.+++.|++++++++|+++..++ +.+ .|.+.+|.++.+|.||+|+|....
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD-DCW-LLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TEE-EEEETTSCEEEESEEEECCGGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-CeE-EEEECCCCEEECCEEEECCCcchh
Confidence 4677788888889999999999999998653 344 688888888999999999998743
No 122
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.73 E-value=4.9e-08 Score=100.18 Aligned_cols=111 Identities=14% Similarity=0.283 Sum_probs=87.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc-------------------------------------ccc---
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------QRL--- 246 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~-------------------------------------~~~--- 246 (488)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. ...
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4679999999999999999999999999999875320 000
Q ss_pred ---------------c----------------CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEE
Q 011322 247 ---------------F----------------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID 295 (488)
Q Consensus 247 ---------------~----------------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~ 295 (488)
. ...+.+.+.+.+++.|++++++++|+++... ++.+..|.+.+|+++.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIK 265 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEE
Confidence 0 0345566777788899999999999999864 5567789999999999
Q ss_pred cCEEEEeecCcCCC--hhhHhcCCc
Q 011322 296 ADTIVIGIGAKPTV--SPFERVGLN 318 (488)
Q Consensus 296 ~D~vi~a~G~~p~~--~~~~~~gl~ 318 (488)
||.||+|+|..+.. .++...|+.
T Consensus 266 Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 266 SRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp CSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred CCEEEECCCCChhhHHHHHHHcCCC
Confidence 99999999998852 235555554
No 123
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.73 E-value=3.4e-08 Score=95.57 Aligned_cols=119 Identities=15% Similarity=0.170 Sum_probs=69.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---------CCCccccCCC-----------------
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---------ALTKGYLFPL----------------- 104 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---------~l~~~~~~~~----------------- 104 (488)
++||+|||||++|+++|..|++.|. +|+|+|+.+....... .....++...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~---~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHV 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCC---cEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCe
Confidence 4799999999999999999999987 8999999864310000 0000000000
Q ss_pred ------------CCCCCCCCCcccccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCC--cEEEeCCCcEEE-eccEEec
Q 011322 105 ------------DKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLK-YGSLIVA 169 (488)
Q Consensus 105 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~--~~v~~~~g~~i~-yd~lVlA 169 (488)
.....................+.+.+ ..+++++++++|++++.+. .+|++.+|+.+. +|+||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a 157 (336)
T 1yvv_A 79 AEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAM-RGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIA 157 (336)
T ss_dssp EEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHH-HTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEEC
T ss_pred eeccccceeccCcccccCCCCCccEEcCccHHHHHHHH-HccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEc
Confidence 00000000000000000011111122 2388999999999998654 367778887664 9999999
Q ss_pred CCCC
Q 011322 170 TGCT 173 (488)
Q Consensus 170 tG~~ 173 (488)
+|..
T Consensus 158 ~g~~ 161 (336)
T 1yvv_A 158 TPAP 161 (336)
T ss_dssp SCHH
T ss_pred CCHH
Confidence 9964
No 124
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.72 E-value=5e-08 Score=96.91 Aligned_cols=124 Identities=12% Similarity=0.075 Sum_probs=73.6
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-C--CCcc---cc--CCC--CCCCCCCCCc--cc
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-A--LTKG---YL--FPL--DKKPARLPGF--HT 116 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~-~--l~~~---~~--~~~--~~~~~~~~~~--~~ 116 (488)
+++++|+|||||++|+++|..|++.|+ +|+|+|+.+.....+. . +... .+ ... .......... ..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 79 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGV---DVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVD 79 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEe
Confidence 456899999999999999999999987 8999999865311100 0 0000 00 000 0000000000 00
Q ss_pred c-cCCC-------CC----CCCHhHHHH--CCcEEEeCCcEEEEeCCC--cEEEeCCCcEEEeccEEecCCCCCC
Q 011322 117 C-VGSG-------GE----RQTPEWYKE--KGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 117 ~-~~~~-------~~----~~~~~~~~~--~~v~~~~~~~v~~id~~~--~~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
. .+.. .. ..+.+.+.+ .+++++.+++|+++..+. .++++.+|+++.+|.||.|+|....
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 80 ALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp TTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred cCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 0 0000 00 001122222 378999999999997654 3677888988999999999998653
No 125
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.72 E-value=2.6e-08 Score=100.67 Aligned_cols=66 Identities=23% Similarity=0.393 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEeC--------------CCCcEEEEEeCCCcEE--EcCEEEEeecCcCCChhh
Q 011322 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAG--------------SDGRVAAVKLEDGSTI--DADTIVIGIGAKPTVSPF 312 (488)
Q Consensus 249 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~--------------~~~~v~~v~~~~g~~i--~~D~vi~a~G~~p~~~~~ 312 (488)
..+...+.+.+++.|++++.+++|+++..+ +++.+..|.+.+| ++ .+|.||+|+|.... .++
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~-~l~ 258 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN-RLL 258 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH-HHH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH-HHH
Confidence 377888888899999999999999999861 2445556788888 58 99999999998643 455
Q ss_pred HhcC
Q 011322 313 ERVG 316 (488)
Q Consensus 313 ~~~g 316 (488)
+.++
T Consensus 259 ~~~g 262 (448)
T 3axb_A 259 NPLG 262 (448)
T ss_dssp GGGT
T ss_pred HHcC
Confidence 5444
No 126
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.71 E-value=1.3e-08 Score=105.61 Aligned_cols=122 Identities=17% Similarity=0.149 Sum_probs=70.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-C--------------CCCCccccCCCCCCCCC-CCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-R--------------PALTKGYLFPLDKKPAR-LPG 113 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~-~--------------~~l~~~~~~~~~~~~~~-~~~ 113 (488)
+++||+|||||++|+++|..|++.|+ +|+|||+.+..... + ..+...+.......... +.+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~---~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~ 124 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGV---GALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAG 124 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTC---CEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCC
Confidence 46799999999999999999999988 89999998653211 0 00000000000000000 000
Q ss_pred c-------cccc-CCCCCC---------CCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEe--CCC-cEEEeccEEecCC
Q 011322 114 F-------HTCV-GSGGER---------QTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLIT--NSG-KLLKYGSLIVATG 171 (488)
Q Consensus 114 ~-------~~~~-~~~~~~---------~~~~~~~~~~v~~~~~~~v~~id~~~~--~v~~--~~g-~~i~yd~lVlAtG 171 (488)
. .... ...... .+.+.+++.+++++.+++|++++.+.. +|++ .+| +++.+|+||.|.|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG 204 (570)
T 3fmw_A 125 IFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDG 204 (570)
T ss_dssp BCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSC
T ss_pred cccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCC
Confidence 0 0000 000000 112333456999999999999977653 4555 677 6899999999999
Q ss_pred CCC
Q 011322 172 CTA 174 (488)
Q Consensus 172 ~~~ 174 (488)
...
T Consensus 205 ~~S 207 (570)
T 3fmw_A 205 GRS 207 (570)
T ss_dssp SSC
T ss_pred CCc
Confidence 865
No 127
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.71 E-value=2.5e-08 Score=103.82 Aligned_cols=124 Identities=21% Similarity=0.298 Sum_probs=73.6
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC--------------CCC-------------ccc
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP--------------ALT-------------KGY 100 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~--------------~l~-------------~~~ 100 (488)
+|+.+||+|||||+||+++|..|++.|+ +|+|||+.+....... .+. ..+
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~---~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 96 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGH---DVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATF 96 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEE
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCC---CEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEE
Confidence 3456899999999999999999999987 8999999864322110 000 000
Q ss_pred cCCCCCCCC------------CCCCcccccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCC-C--cEEEeC-CC--cEEE
Q 011322 101 LFPLDKKPA------------RLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIE-K--QTLITN-SG--KLLK 162 (488)
Q Consensus 101 ~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~-~--~~v~~~-~g--~~i~ 162 (488)
......... ..+.............+.+.+++.|++++.+++|+++..+ . ..|++. +| .++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~ 176 (591)
T 3i3l_A 97 LWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVE 176 (591)
T ss_dssp ECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEE
T ss_pred EecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEE
Confidence 000000000 0000000000000001123345679999999999999864 2 356665 66 5799
Q ss_pred eccEEecCCCCC
Q 011322 163 YGSLIVATGCTA 174 (488)
Q Consensus 163 yd~lVlAtG~~~ 174 (488)
+|.||.|+|...
T Consensus 177 AdlVV~AdG~~S 188 (591)
T 3i3l_A 177 SDFVIDAGGSGG 188 (591)
T ss_dssp ESEEEECCGGGC
T ss_pred cCEEEECCCCcc
Confidence 999999999754
No 128
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.70 E-value=1.3e-08 Score=101.06 Aligned_cols=123 Identities=16% Similarity=0.193 Sum_probs=72.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCC--Cc---------cc---cCCCCCCCCCC----
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPAL--TK---------GY---LFPLDKKPARL---- 111 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l--~~---------~~---~~~~~~~~~~~---- 111 (488)
.++||+|||||++|+++|..|++.|+ +|+|+|+.+......... .. +. +.........+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~---~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGH---RVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVY 81 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEe
Confidence 35799999999999999999999987 899999986531110000 00 00 00000000000
Q ss_pred -CC--cccccCC-------CC-------CCCCHhHHHHC-CcEEEeCCcEEEEeCCCc----EEEeCCCcEEEeccEEec
Q 011322 112 -PG--FHTCVGS-------GG-------ERQTPEWYKEK-GIEMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVA 169 (488)
Q Consensus 112 -~~--~~~~~~~-------~~-------~~~~~~~~~~~-~v~~~~~~~v~~id~~~~----~v~~~~g~~i~yd~lVlA 169 (488)
.+ ....... .. ...+.+.+++. +++++.+++|++++.+.. .+++.+|+++.+|.||.|
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~A 161 (399)
T 2x3n_A 82 HDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGA 161 (399)
T ss_dssp ETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEEC
T ss_pred CCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEEC
Confidence 00 0000000 00 00011222334 899999999999986543 677888888999999999
Q ss_pred CCCCCC
Q 011322 170 TGCTAS 175 (488)
Q Consensus 170 tG~~~~ 175 (488)
+|....
T Consensus 162 dG~~s~ 167 (399)
T 2x3n_A 162 DGIASY 167 (399)
T ss_dssp CCTTCH
T ss_pred CCCChH
Confidence 998653
No 129
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.69 E-value=2.9e-07 Score=92.53 Aligned_cols=58 Identities=24% Similarity=0.278 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHcCcEEEcCC---eEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcC
Q 011322 249 PSLAQRYEQLYQQNGVKFVKGA---SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 307 (488)
Q Consensus 249 ~~~~~~~~~~l~~~GV~v~~~~---~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 307 (488)
..+...+.+.+++.|+++++++ +|+++... ++.+.+|.+.+|+++.+|.||+|+|...
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 4677788888899999999999 99999864 5667679999998899999999999764
No 130
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.69 E-value=1.8e-07 Score=90.99 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=78.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc---------------------c-cC---------HHHHHHHH
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR---------------------L-FT---------PSLAQRYE 256 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~---------------------~-~~---------~~~~~~~~ 256 (488)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+... . .+ ..+.+++.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 46999999999999999999999999999988653110 0 00 57788888
Q ss_pred HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 257 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 257 ~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
+.+++.|++++++++|++++.. ++.+..|.+++| ++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHF-GERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 8889999999999999999865 333322777777 79999999999963
No 131
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.67 E-value=1.6e-07 Score=93.34 Aligned_cols=123 Identities=14% Similarity=0.116 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCC-------------------C---
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLD-------------------K--- 106 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~-------------------~--- 106 (488)
+++++|+|||||++|+++|..|++.|+ +|+|+|+.+..........- .+.+.. .
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~g~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~~ 99 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGI---DVSVYERDNDREARIFGGTL-DLHKGSGQEAMKKAGLLQTYYDLALPMGV 99 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC---EEEEEECSSSTTCCCCSCCE-ECCTTTHHHHHHHTTCHHHHHHHCBCCCE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCccccccCCee-eeCCccHHHHHHhcChHHHHHHhhcccce
Confidence 456899999999999999999999987 89999998653221000000 000000 0
Q ss_pred CCCCCCCccccc-------CCCCCC----CCHhHHHHC--CcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCC
Q 011322 107 KPARLPGFHTCV-------GSGGER----QTPEWYKEK--GIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATG 171 (488)
Q Consensus 107 ~~~~~~~~~~~~-------~~~~~~----~~~~~~~~~--~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG 171 (488)
......+..... ...... .+.+.+.+. +++++++++|++++.+.. +|++.+|+++.+|.||.|+|
T Consensus 100 ~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG 179 (398)
T 2xdo_A 100 NIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANG 179 (398)
T ss_dssp EEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSC
T ss_pred EEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCC
Confidence 000000000000 000000 011122221 357888999999986543 67788888899999999999
Q ss_pred CCCC
Q 011322 172 CTAS 175 (488)
Q Consensus 172 ~~~~ 175 (488)
....
T Consensus 180 ~~S~ 183 (398)
T 2xdo_A 180 GMSK 183 (398)
T ss_dssp TTCS
T ss_pred cchh
Confidence 8654
No 132
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.64 E-value=4.3e-08 Score=97.16 Aligned_cols=121 Identities=17% Similarity=0.211 Sum_probs=71.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCC---Ccccc----CCCC-CC-CCCC--------CC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPAL---TKGYL----FPLD-KK-PARL--------PG 113 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l---~~~~~----~~~~-~~-~~~~--------~~ 113 (488)
++||+|||||+||+++|..|++.|+ +|+|+|+.+......... +...+ .... .. .... .+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~---~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 80 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSE 80 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCC
Confidence 5799999999999999999999987 899999987532211000 00000 0000 00 0000 00
Q ss_pred cc--cccCC------CC-------CCCCHhHHHHCCcEEEeCCcEEEEeCCCcE---EEe---CCCcEEEeccEEecCCC
Q 011322 114 FH--TCVGS------GG-------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LIT---NSGKLLKYGSLIVATGC 172 (488)
Q Consensus 114 ~~--~~~~~------~~-------~~~~~~~~~~~~v~~~~~~~v~~id~~~~~---v~~---~~g~~i~yd~lVlAtG~ 172 (488)
.. ..... .+ ...+.+.+.+.|++++.+++|+++..++.. |++ .++.++.+|.||.|+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 81 KRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp SSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred CEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCc
Confidence 00 00000 00 001122334569999999999999876553 444 34567999999999997
Q ss_pred CC
Q 011322 173 TA 174 (488)
Q Consensus 173 ~~ 174 (488)
..
T Consensus 161 ~s 162 (397)
T 3cgv_A 161 ES 162 (397)
T ss_dssp TC
T ss_pred ch
Confidence 65
No 133
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.63 E-value=3.9e-08 Score=92.94 Aligned_cols=122 Identities=10% Similarity=0.096 Sum_probs=69.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHc-CCCCCcEEEEcCCCCCCCCCCCCCccccCC----CC--------CCCCCC-CCcc
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAPYERPALTKGYLFP----LD--------KKPARL-PGFH 115 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~-g~~~~~V~lie~~~~~~~~~~~l~~~~~~~----~~--------~~~~~~-~~~~ 115 (488)
.++||+|||||++|+++|..|++. |. +|+|||+.+....... .....+.. .. ..+... ..+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~---~V~viEk~~~~gg~~~-~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~ 113 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNV---QVAIIEQSVSPGGGAW-LGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYV 113 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTS---CEEEEESSSSCCTTTT-CCSTTCCCEEEETTTHHHHHHHTCCCEECSSEE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCC---eEEEEECCCCCCCcee-cCCcchHHHHcCcHHHHHHHHcCCCcccCCCEE
Confidence 457999999999999999999997 76 8999999875421100 00000000 00 000000 0000
Q ss_pred cc-cCCCCCCCCHhHHHH-CCcEEEeCCcEEEEeCCCcEE---EeC---------CC-----cEEEeccEEecCCCCCC
Q 011322 116 TC-VGSGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQTL---ITN---------SG-----KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 116 ~~-~~~~~~~~~~~~~~~-~~v~~~~~~~v~~id~~~~~v---~~~---------~g-----~~i~yd~lVlAtG~~~~ 175 (488)
.. ........+.+.+.+ .+++++.+++|+++..+...+ .+. ++ .++.+|.||+|||..+.
T Consensus 114 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 114 VVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp EESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred EecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchH
Confidence 00 000000011222333 589999999999998665432 332 22 56999999999997654
No 134
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.62 E-value=7.8e-08 Score=93.40 Aligned_cols=118 Identities=18% Similarity=0.249 Sum_probs=70.1
Q ss_pred CeEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCC----CC----CCC----ccccCCCCC----------
Q 011322 52 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYE----RP----ALT----KGYLFPLDK---------- 106 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~lie~~~~~~~~----~~----~l~----~~~~~~~~~---------- 106 (488)
+||+|||||++|+++|..|++ .|+ +|+|+|+++..... +. ... ..++.....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~---~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 78 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL---YLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYD 78 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE---EEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc---eEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHH
Confidence 589999999999999999999 776 89999998643210 00 000 000000000
Q ss_pred ------CCCCC----------CCcccccCCCCCCCCH-hHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEE
Q 011322 107 ------KPARL----------PGFHTCVGSGGERQTP-EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLI 167 (488)
Q Consensus 107 ------~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lV 167 (488)
....+ ..............+. .+.+..+++++++++|++|..++. +|++.+|+.+.+|+||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV 158 (342)
T 3qj4_A 79 ELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIV 158 (342)
T ss_dssp HHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEE
T ss_pred HHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEE
Confidence 00000 0000011111111112 233445899999999999987543 6777788878999999
Q ss_pred ecCCC
Q 011322 168 VATGC 172 (488)
Q Consensus 168 lAtG~ 172 (488)
+|+..
T Consensus 159 ~A~p~ 163 (342)
T 3qj4_A 159 LTMPV 163 (342)
T ss_dssp ECSCH
T ss_pred ECCCH
Confidence 99974
No 135
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.59 E-value=7.4e-08 Score=99.58 Aligned_cols=38 Identities=18% Similarity=0.343 Sum_probs=34.1
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
+.+++|+|||||++|+++|..|++.|. +|+|||+.+..
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~---~v~viEr~~~~ 40 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGV---RVLVVERRPGL 40 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSSSC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 456899999999999999999999988 89999998753
No 136
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.59 E-value=1.8e-08 Score=99.33 Aligned_cols=64 Identities=17% Similarity=0.132 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcC
Q 011322 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 316 (488)
Q Consensus 249 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~g 316 (488)
..+...+.+.+++.|++++.+++|+++..+++ . ..|.+.+| ++.+|.||+|+|.... .+++.++
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~g-~i~a~~VV~A~G~~s~-~l~~~~g 217 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDAG-SYRAAVLVNAAGAWCD-AIAGLAG 217 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSSE-EEEESEEEECCGGGHH-HHHHHHT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCCC-EEEcCEEEECCChhHH-HHHHHhC
Confidence 46777788888999999999999999986533 3 46788777 7999999999998653 4444444
No 137
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.59 E-value=1.9e-07 Score=89.94 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=81.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccc------------------cCHHHHHHHHHHHHHcCcEEEcC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------FTPSLAQRYEQLYQQNGVKFVKG 269 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~------------------~~~~~~~~~~~~l~~~GV~v~~~ 269 (488)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-... ...++...+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 579999999999999999999999999999976432110 13567778888888889999999
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecC---cCCC
Q 011322 270 ASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA---KPTV 309 (488)
Q Consensus 270 ~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~---~p~~ 309 (488)
++|++++..+++. ..+.+.+|+ +.+|.||+|+|. .|..
T Consensus 88 ~~v~~i~~~~~~~-~~v~~~~g~-~~~d~vVlAtG~~~~~p~~ 128 (332)
T 3lzw_A 88 QAVESVEKQADGV-FKLVTNEET-HYSKTVIITAGNGAFKPRK 128 (332)
T ss_dssp CCEEEEEECTTSC-EEEEESSEE-EEEEEEEECCTTSCCEECC
T ss_pred CEEEEEEECCCCc-EEEEECCCE-EEeCEEEECCCCCcCCCCC
Confidence 9999998754433 357788886 999999999999 6653
No 138
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.58 E-value=1.2e-07 Score=94.90 Aligned_cols=57 Identities=14% Similarity=0.279 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 248 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
...+.+.+.+.+++.|+++++++.|++|+.+ ++.+ | +.+|+++.+|.||+|+|....
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHH
Confidence 3567888889999999999999999999854 4444 4 567888999999999997543
No 139
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.58 E-value=5.2e-07 Score=89.06 Aligned_cols=79 Identities=18% Similarity=0.400 Sum_probs=57.4
Q ss_pred CcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh
Q 011322 231 LDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 231 ~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
....++.+....+. +..+...+.+.+++.|++++.+++|++++..+++ + .+.+.+| ++.+|.||+|+|...+ .
T Consensus 135 ~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~a~~vV~A~G~~~~-~ 207 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF---SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-V-KIETANG-SYTADKLIVSMGAWNS-K 207 (389)
T ss_dssp TEEEEEETTCEEEE---HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-E-EEEETTE-EEEEEEEEECCGGGHH-H
T ss_pred CceEEEeCCCcEEe---HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCCC-EEEeCEEEEecCccHH-H
Confidence 34566666554443 3567788888899999999999999999865443 3 4666666 6999999999998754 4
Q ss_pred hhHhcC
Q 011322 311 PFERVG 316 (488)
Q Consensus 311 ~~~~~g 316 (488)
++...+
T Consensus 208 l~~~~g 213 (389)
T 2gf3_A 208 LLSKLN 213 (389)
T ss_dssp HGGGGT
T ss_pred Hhhhhc
Confidence 555444
No 140
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.58 E-value=3.4e-07 Score=91.16 Aligned_cols=100 Identities=22% Similarity=0.283 Sum_probs=78.9
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccc---------------------------------------
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL--------------------------------------- 246 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~--------------------------------------- 246 (488)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.+....
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 34579999999999999999999999999999876532100
Q ss_pred ------------------------cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEe
Q 011322 247 ------------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIG 302 (488)
Q Consensus 247 ------------------------~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a 302 (488)
....+.+.+.+.+++.|++++++++|+++..+++ . ..|.+.+| ++.+|.||+|
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~-~-~~V~~~~g-~i~ad~VIlA 182 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS-G-FRVTTSAG-TVDAASLVVA 182 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-E-EEEEETTE-EEEESEEEEC
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-E-EEEEECCc-EEEeeEEEEC
Confidence 0124566777888889999999999999986533 3 36778887 7999999999
Q ss_pred ecCcCC
Q 011322 303 IGAKPT 308 (488)
Q Consensus 303 ~G~~p~ 308 (488)
+|..+.
T Consensus 183 tG~~S~ 188 (417)
T 3v76_A 183 SGGKSI 188 (417)
T ss_dssp CCCSSC
T ss_pred CCCccC
Confidence 999863
No 141
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.57 E-value=3.6e-08 Score=97.50 Aligned_cols=37 Identities=27% Similarity=0.467 Sum_probs=33.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
+++||+||||||||+++|..|+++|+ +|+|+|+.+..
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~---~V~v~Er~~~~ 39 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 46899999999999999999999998 89999997654
No 142
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.56 E-value=3.8e-08 Score=101.89 Aligned_cols=162 Identities=13% Similarity=0.153 Sum_probs=90.3
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC-CCCCCCCCCccc------------cCCC----------
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY-APYERPALTKGY------------LFPL---------- 104 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~-~~~~~~~l~~~~------------~~~~---------- 104 (488)
....+||+|||||+||++||..|++.|. +|+|||+.+. ........+.+. +...
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi 94 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARGGL---HCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGI 94 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEE
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHCCC---cEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCC
Confidence 3456899999999999999999999987 8999998742 111100000000 0000
Q ss_pred --CC-CCCCCCCccc---ccC-CCCCCCCHhHHHH-CCcEEEeCCcEEEEeCCCcE---EEeCCCcEEEeccEEecCCCC
Q 011322 105 --DK-KPARLPGFHT---CVG-SGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCT 173 (488)
Q Consensus 105 --~~-~~~~~~~~~~---~~~-~~~~~~~~~~~~~-~~v~~~~~~~v~~id~~~~~---v~~~~g~~i~yd~lVlAtG~~ 173 (488)
.. ....-+.... ... ..+.....+.+++ .+++++. .+|+.+..++.. |.+.+|.++.+|.||+|||..
T Consensus 95 ~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 95 QFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp EEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred chhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 00 0000000000 000 0000111233444 4899865 589988765543 667788889999999999987
Q ss_pred CCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEE
Q 011322 174 ASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTII 236 (488)
Q Consensus 174 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv 236 (488)
+.... .+ +...+. +.+++ |+..+++++..|.+.|.++..+
T Consensus 174 s~~~i-~~-----G~~~~~--------------~g~~v---G~~~a~~la~~L~~~G~kv~~l 213 (641)
T 3cp8_A 174 LNGLI-HI-----GMDHFP--------------GGRST---AEPPVEGLTESLASLGFSFGRL 213 (641)
T ss_dssp BTCEE-EE-----TTEEEE--------------CSSST---TSCCBCSHHHHHHHTTCCEEEE
T ss_pred CCccc-ee-----eeeeec--------------ccccc---CCchhhhhHHHHHhCCceEEee
Confidence 54211 11 111110 11211 3567788998999999887644
No 143
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.56 E-value=6.8e-08 Score=99.25 Aligned_cols=124 Identities=17% Similarity=0.209 Sum_probs=72.3
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCC-c---ccc--CC-------CCCCCC-----
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALT-K---GYL--FP-------LDKKPA----- 109 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~-~l~-~---~~~--~~-------~~~~~~----- 109 (488)
++++||+|||||++|+++|..|++.|+ +|+|||+.+...+..- .+. . .++ .. ......
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~---~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~ 81 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGH---RVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTF 81 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCC---CEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceE
Confidence 345799999999999999999999987 8999999873221100 000 0 000 00 000000
Q ss_pred CCCC--------ccc--ccCCCCC---------CCCHhHHHHCCcEEEeCCcEEEEeCCCcE---EE--eCCCc--EEEe
Q 011322 110 RLPG--------FHT--CVGSGGE---------RQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LI--TNSGK--LLKY 163 (488)
Q Consensus 110 ~~~~--------~~~--~~~~~~~---------~~~~~~~~~~~v~~~~~~~v~~id~~~~~---v~--~~~g~--~i~y 163 (488)
.... +.. ....... ..+.+.+.+.|++++.+++|+++..++.. |+ ..+|+ ++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~a 161 (512)
T 3e1t_A 82 RWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHA 161 (512)
T ss_dssp ECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEE
T ss_pred EecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEc
Confidence 0000 000 0000000 01123345579999999999999876543 33 34574 7999
Q ss_pred ccEEecCCCCCC
Q 011322 164 GSLIVATGCTAS 175 (488)
Q Consensus 164 d~lVlAtG~~~~ 175 (488)
|.||.|+|....
T Consensus 162 d~VI~AdG~~S~ 173 (512)
T 3e1t_A 162 RFIVDASGNRTR 173 (512)
T ss_dssp EEEEECCCTTCS
T ss_pred CEEEECCCcchH
Confidence 999999998654
No 144
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.55 E-value=3.8e-08 Score=97.08 Aligned_cols=46 Identities=30% Similarity=0.338 Sum_probs=36.4
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcE---EEeCCCcEEEeccEEecCCCCC
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTA 174 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~~~---v~~~~g~~i~yd~lVlAtG~~~ 174 (488)
+.+++.|++++.+++|+++..++.. |++.+| ++.+|.||+|+|...
T Consensus 157 ~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 157 VKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 4456679999999999999866543 566666 699999999999754
No 145
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.55 E-value=5.9e-08 Score=96.69 Aligned_cols=125 Identities=11% Similarity=0.033 Sum_probs=70.6
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---------------CCC-----------cc-c
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---------------ALT-----------KG-Y 100 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---------------~l~-----------~~-~ 100 (488)
.++++||+|||||++|+++|..|++.|+ +|+|+|+.+....... .+. .. +
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~---~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~ 96 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGI---DCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAY 96 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEE
Confidence 3456899999999999999999999988 8999999865311000 000 00 0
Q ss_pred cCCC-CCCCCCCCCcc--cc-cCCCCCC---CCHhHHHH--CCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEec
Q 011322 101 LFPL-DKKPARLPGFH--TC-VGSGGER---QTPEWYKE--KGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVA 169 (488)
Q Consensus 101 ~~~~-~~~~~~~~~~~--~~-~~~~~~~---~~~~~~~~--~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlA 169 (488)
.... ......++... .. ....+.. .+...+.+ ..++++.+++|++++.+.. ++++.+|+++.+|.||.|
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~A 176 (407)
T 3rp8_A 97 RDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAA 176 (407)
T ss_dssp EETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEEC
T ss_pred EECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEEC
Confidence 0000 00000000000 00 0000000 01111111 1278889999999987654 567789999999999999
Q ss_pred CCCCCC
Q 011322 170 TGCTAS 175 (488)
Q Consensus 170 tG~~~~ 175 (488)
+|....
T Consensus 177 dG~~S~ 182 (407)
T 3rp8_A 177 DGSHSA 182 (407)
T ss_dssp CCTTCS
T ss_pred CCcChH
Confidence 997653
No 146
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.54 E-value=1.1e-06 Score=90.75 Aligned_cols=102 Identities=16% Similarity=0.195 Sum_probs=82.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc--------------------c----------------cCHHH
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR--------------------L----------------FTPSL 251 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~--------------------~----------------~~~~~ 251 (488)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... . -.+++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 57999999999999999999999999999986532100 0 12467
Q ss_pred HHHHHHHHHHcCc--EEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeec--CcCCC
Q 011322 252 AQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--AKPTV 309 (488)
Q Consensus 252 ~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G--~~p~~ 309 (488)
.+++.+..++.|+ +++++++|++++.+++.....|.+++|+++.+|.||+|+| .+|..
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCC
Confidence 7788888888898 8999999999987655445578889999999999999999 45543
No 147
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.53 E-value=6.6e-08 Score=98.89 Aligned_cols=123 Identities=15% Similarity=0.210 Sum_probs=73.1
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-C--------------CCCCccccCCCCCCC-CCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-R--------------PALTKGYLFPLDKKP-ARL 111 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~-~--------------~~l~~~~~~~~~~~~-~~~ 111 (488)
..++++|+|||||++|+++|..|++.|+ +|+|||+.+..... + ..+...+... .... ..+
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~ 83 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGV---EVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGHF 83 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-cccccccc
Confidence 3456899999999999999999999988 89999998653211 0 0010000000 0000 000
Q ss_pred CCcc-ccc--CCC--C---------CCCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCc---EEEeccEEecCCC
Q 011322 112 PGFH-TCV--GSG--G---------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGC 172 (488)
Q Consensus 112 ~~~~-~~~--~~~--~---------~~~~~~~~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~---~i~yd~lVlAtG~ 172 (488)
.+.. ... ... . ...+.+.+.+.+++++.+++|+++..+.. ++++.++. ++.+|+||.|.|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~ 163 (500)
T 2qa1_A 84 GGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGG 163 (500)
T ss_dssp TTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCT
T ss_pred cceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCc
Confidence 0000 000 000 0 00112233556899999999999976554 45555654 7999999999998
Q ss_pred CC
Q 011322 173 TA 174 (488)
Q Consensus 173 ~~ 174 (488)
..
T Consensus 164 ~S 165 (500)
T 2qa1_A 164 RS 165 (500)
T ss_dssp TC
T ss_pred ch
Confidence 65
No 148
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.53 E-value=8.5e-07 Score=86.63 Aligned_cols=99 Identities=15% Similarity=0.204 Sum_probs=80.2
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc------------------ccCHHHHHHHHHHHHHcCcEEEc
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------LFTPSLAQRYEQLYQQNGVKFVK 268 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~------------------~~~~~~~~~~~~~l~~~GV~v~~ 268 (488)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-.. ....++.+.+.+.+++.|++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 457999999999999999999999999999987643110 01256677778888888999999
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 269 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 269 ~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
++.|+.++..+++.+ .|.+.+|+++.+|.||+|+|..
T Consensus 94 ~~~v~~i~~~~~~~~-~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 NETVTKYTKLDDGTF-ETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp SCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEEEEECCCceE-EEEECCCcEEEeeEEEEccCCC
Confidence 999999986544333 5788889899999999999994
No 149
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.52 E-value=1.2e-07 Score=93.47 Aligned_cols=101 Identities=24% Similarity=0.400 Sum_probs=77.9
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc-c-ccC---------HHHHHHHHHHHHHcCcEEEcCCeEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-R-LFT---------PSLAQRYEQLYQQNGVKFVKGASIKN 274 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~-~-~~~---------~~~~~~~~~~l~~~GV~v~~~~~v~~ 274 (488)
...+|+|||+|+.|+.+|..|...+.+|+++++.+.+.. + .++ .++.....+.+++.||+++++++|++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 345799999999999999999778899999998876421 1 011 11112234667888999999999999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh
Q 011322 275 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 275 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
++.. .. .|++++|+++.+|.+|+|||.+|...
T Consensus 88 id~~-~~---~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 88 IDPN-NK---LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp EETT-TT---EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EECC-CC---EEEECCCCEEECCEEEEecCCCcCCC
Confidence 9854 22 57889999999999999999988743
No 150
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.52 E-value=1.1e-07 Score=93.81 Aligned_cols=36 Identities=17% Similarity=0.275 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
..++||+|||||++|+++|+.|++.|. +|+|||+..
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~---~V~llE~~~ 50 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENK---NTALFESGT 50 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCC
Confidence 345899999999999999999999987 899999975
No 151
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.51 E-value=4.4e-07 Score=87.59 Aligned_cols=101 Identities=15% Similarity=0.199 Sum_probs=79.2
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCC----CCc------------cc----ccCHHHHHHHHHHHHHcCcE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN----HLL------------QR----LFTPSLAQRYEQLYQQNGVK 265 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~----~~~------------~~----~~~~~~~~~~~~~l~~~GV~ 265 (488)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+ .+- +. ...+++...+.+.+++.|++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 100 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTE 100 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCE
Confidence 34689999999999999999999999999999843 110 01 11347788888999999999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEe---CCCcEEEcCEEEEeecCcCCC
Q 011322 266 FVKGASIKNLEAGSDGRVAAVKL---EDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 266 v~~~~~v~~i~~~~~~~v~~v~~---~~g~~i~~D~vi~a~G~~p~~ 309 (488)
++.++ ++.++.. ++.+ .+.+ .++.++.+|.+|+|+|.+|..
T Consensus 101 i~~~~-v~~i~~~-~~~~-~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 101 IITET-VSKVDLS-SKPF-KLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp EECSC-EEEEECS-SSSE-EEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred EEEeE-EEEEEEc-CCEE-EEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 99998 9999864 3333 4555 467789999999999998764
No 152
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.50 E-value=1.3e-07 Score=95.55 Aligned_cols=99 Identities=17% Similarity=0.285 Sum_probs=75.2
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||++|+.+|..|++.|. +|+|+++.+... |... ..+ .....+.
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g~---~V~lv~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 217 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLGA---EVIVLEYMDRIL---PTMD-----------LEV-----------SRAAERV 217 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSC-----------HHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---EEEEEecCCccc---cccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999986 899999876521 1000 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCCc
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASR 176 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~~ 176 (488)
+++.+++++.+++|++++.+.. .+++.+|+++.+|.||+|+|..|..
T Consensus 218 l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 218 FKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 7788999999999999987654 4555688889999999999988763
No 153
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.50 E-value=7.5e-07 Score=86.00 Aligned_cols=97 Identities=18% Similarity=0.220 Sum_probs=78.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc------------------cccCHHHHHHHHHHHHHcCcEEEcC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------RLFTPSLAQRYEQLYQQNGVKFVKG 269 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~------------------~~~~~~~~~~~~~~l~~~GV~v~~~ 269 (488)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+.. .....++.+.+.+.+++.+++++.+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 5799999999999999999999999999998764311 0012456677777788889999999
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 270 ASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 270 ~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
++|+.++..++ . ..+.+.+|+++.+|.||+|+|..
T Consensus 86 ~~v~~i~~~~~-~-~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGD-L-FKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETT-E-EEEEETTSCEEEEEEEEECCTTS
T ss_pred CEEEEEEECCC-E-EEEEECCCCEEEeCEEEECCCCC
Confidence 99999986533 2 35777888889999999999994
No 154
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.50 E-value=3.1e-08 Score=100.17 Aligned_cols=123 Identities=18% Similarity=0.262 Sum_probs=71.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-CCCCC---CccccC--C-CCCCCC----CCCCcccc-
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-ERPAL---TKGYLF--P-LDKKPA----RLPGFHTC- 117 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-~~~~l---~~~~~~--~-~~~~~~----~~~~~~~~- 117 (488)
+++||+|||||+||+++|..|++.|+ +|+|+|+.+.... ..+.. ....+. . ...... ...+....
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~---~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGL---KILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSC---CEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 35899999999999999999999987 8999999864211 10000 000000 0 000000 00000000
Q ss_pred ---------cCCCC-------CCCCHhHHHHCCcEEEeCCcEEEEeCCCcE---EEeC---CCc--EEEeccEEecCCCC
Q 011322 118 ---------VGSGG-------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LITN---SGK--LLKYGSLIVATGCT 173 (488)
Q Consensus 118 ---------~~~~~-------~~~~~~~~~~~~v~~~~~~~v~~id~~~~~---v~~~---~g~--~i~yd~lVlAtG~~ 173 (488)
.+..+ ...+.+.+.+.|++++.+++|+++..++.. |++. +|+ ++.+|.||.|+|..
T Consensus 82 ~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 82 PDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYS 161 (453)
T ss_dssp TTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGG
T ss_pred CCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCc
Confidence 00000 001122334579999999999999876544 4443 665 79999999999976
Q ss_pred CC
Q 011322 174 AS 175 (488)
Q Consensus 174 ~~ 175 (488)
..
T Consensus 162 s~ 163 (453)
T 3atr_A 162 RS 163 (453)
T ss_dssp CT
T ss_pred hh
Confidence 54
No 155
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.50 E-value=1.6e-07 Score=97.76 Aligned_cols=38 Identities=26% Similarity=0.436 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
...+||||||||+||++||..|++.|. +|+|+|+.+..
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~---~V~vlEk~~~~ 161 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGA---KVILIEKEPVI 161 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 346899999999999999999999987 89999998754
No 156
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.50 E-value=1.7e-07 Score=95.88 Aligned_cols=123 Identities=15% Similarity=0.191 Sum_probs=73.0
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-C--------------CCCCccccCCCCCCCCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-R--------------PALTKGYLFPLDKKPARLPG 113 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~-~--------------~~l~~~~~~~~~~~~~~~~~ 113 (488)
.++++|+|||||++|+++|..|++.|+ +|+|||+.+..... + ..+...+..........+.+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 86 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGV---DVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGG 86 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecc
Confidence 456899999999999999999999988 89999998653211 0 00000000000000000000
Q ss_pred cc-cc--cCCCC-----------CCCCHhHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCc---EEEeccEEecCCCCC
Q 011322 114 FH-TC--VGSGG-----------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGCTA 174 (488)
Q Consensus 114 ~~-~~--~~~~~-----------~~~~~~~~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~---~i~yd~lVlAtG~~~ 174 (488)
.. .. ..... ...+.+.+.+.+++++.+++|+++..+.. ++++.++. ++.+|+||.|.|...
T Consensus 87 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 87 RPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred eecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 00 00 00000 00112334556899999999999976543 56666664 799999999999865
No 157
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.49 E-value=1.1e-07 Score=98.89 Aligned_cols=38 Identities=24% Similarity=0.417 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
...+||||||||+||++||..|++.|. +|+|||+.+..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~---~V~vlEk~~~~ 156 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGA---NVILVDKAPFS 156 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTC---CEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 345799999999999999999999987 89999998754
No 158
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.49 E-value=9.3e-07 Score=87.05 Aligned_cols=97 Identities=22% Similarity=0.254 Sum_probs=79.6
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc-----------------------------------------
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 245 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~----------------------------------------- 245 (488)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987654210
Q ss_pred --ccC-----------HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 246 --LFT-----------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 246 --~~~-----------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
.++ ..+.+.+.+.+++.|+++++++++++++. ++ .|++.+|+++.+|.||.|+|..+.
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHH
Confidence 000 34566777888888999999999999985 33 477889999999999999999874
No 159
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.48 E-value=1.8e-07 Score=94.17 Aligned_cols=100 Identities=22% Similarity=0.322 Sum_probs=77.5
Q ss_pred CeEEEECCcHHHHHHHHHHHh---CCCcEEEEecCCCCcccc----------cCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------FTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~---~g~~vtlv~~~~~~~~~~----------~~~~~~~~~~~~l~~~GV~v~~~~~v~~ 274 (488)
++|+|||||+.|+.+|..|++ .+.+|+++++.+.+.... ...++...+.+.+++.||+++. .+++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 789999999987542211 1122333356777889999985 58999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhh
Q 011322 275 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 312 (488)
Q Consensus 275 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 312 (488)
++.+ +. .|.+++|+++.+|.+|+|+|.+|+...+
T Consensus 84 id~~-~~---~V~~~~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 84 IDAE-AQ---NITLADGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp EETT-TT---EEEETTSCEEECSEEEECCCCEECGGGS
T ss_pred EEcC-CC---EEEECCCCEEECCEEEECCCCCcCcccC
Confidence 9854 22 5788899999999999999999875433
No 160
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.48 E-value=1.1e-06 Score=87.10 Aligned_cols=99 Identities=11% Similarity=0.195 Sum_probs=77.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc--------------c------c---------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ--------------R------L--------------------- 246 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~--------------~------~--------------------- 246 (488)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 4699999999999999999999999999998764310 0 0
Q ss_pred ----------------------cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCC---CCcEEEEEeCCCcEEEcCEEEE
Q 011322 247 ----------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS---DGRVAAVKLEDGSTIDADTIVI 301 (488)
Q Consensus 247 ----------------------~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~---~~~v~~v~~~~g~~i~~D~vi~ 301 (488)
....+.+.+.+.+++.||++++++.++++..++ ++.+ .|.+.+| ++.+|.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEEE
Confidence 123455667788888999999999999998541 2333 5777776 799999999
Q ss_pred eecCcCC
Q 011322 302 GIGAKPT 308 (488)
Q Consensus 302 a~G~~p~ 308 (488)
|+|..+.
T Consensus 163 AtG~~s~ 169 (401)
T 2gqf_A 163 ATGGLSM 169 (401)
T ss_dssp CCCCSSC
T ss_pred CCCCccC
Confidence 9999884
No 161
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.47 E-value=9.3e-07 Score=84.65 Aligned_cols=100 Identities=19% Similarity=0.281 Sum_probs=79.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecC--CCCc--------cc---ccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE--NHLL--------QR---LFTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~--~~~~--------~~---~~~~~~~~~~~~~l~~~GV~v~~~~~v~~ 274 (488)
.+|+|||+|+.|+.+|..|++.|.+|+++++. ..+. +. ....++.+.+.+.+++.|++++. .++++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 57999999999999999999999999999985 1111 11 11246777888888889999999 88999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh
Q 011322 275 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 275 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
++..+ +. ..+.+.+|+++.+|.+|+|+|..|...
T Consensus 95 i~~~~-~~-~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENRG-DE-FVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC---C-EEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEecC-CE-EEEEECCCCEEEcCEEEECcCCCCccC
Confidence 98653 22 357788888999999999999987643
No 162
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.47 E-value=7.7e-07 Score=91.67 Aligned_cols=101 Identities=17% Similarity=0.179 Sum_probs=81.4
Q ss_pred CeEEEECCcHHHHHHHHHHH-hCCCcEEEEecCCCCccc--------------------c----------------cCHH
Q 011322 208 KKVVVVGGGYIGMEVAAAAV-GWKLDTTIIFPENHLLQR--------------------L----------------FTPS 250 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~-~~g~~vtlv~~~~~~~~~--------------------~----------------~~~~ 250 (488)
.+|+|||+|+.|+.+|..|+ +.|.+|+++++.+.+... . ..++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 999999999987533100 0 0235
Q ss_pred HHHHHHHHHHHcCc--EEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecC--cCC
Q 011322 251 LAQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA--KPT 308 (488)
Q Consensus 251 ~~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~--~p~ 308 (488)
+.+++.+..++.|+ +++++++|++++.++++....|.+++|+++.+|.||+|+|. +|.
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC
Confidence 67778888888898 89999999999876554455788899999999999999994 554
No 163
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.47 E-value=4.1e-07 Score=94.79 Aligned_cols=37 Identities=38% Similarity=0.553 Sum_probs=33.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHc------CCCCCcEEEEcCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEH------GMADGRLCIVSKEAYA 89 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~------g~~~~~V~lie~~~~~ 89 (488)
+.+||||||||+||+++|..|++. |. +|+|||+.+..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~---~V~vlEk~~~~ 76 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDL---RVCLVEKAAHI 76 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCC---CEEEECSSSST
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCC---cEEEEeCCCCC
Confidence 358999999999999999999998 77 89999998654
No 164
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.46 E-value=8.7e-07 Score=84.51 Aligned_cols=101 Identities=20% Similarity=0.268 Sum_probs=78.4
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCC--CCc---------c--cccCHHHHHHHHHHHHHcCcEEEcCCeEEEE
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--HLL---------Q--RLFTPSLAQRYEQLYQQNGVKFVKGASIKNL 275 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~--~~~---------~--~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i 275 (488)
+++|||+|+.|+.+|..|++.|.+|+++++.. .+. . ....+.+.+.+.+.+++.|++++.+++++.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 58999999999999999999999999997531 111 0 0012467778888888899999999999999
Q ss_pred EeCCC-CcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 276 EAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 276 ~~~~~-~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
+...+ +....+.+++|+++.+|.+|+|+|..|..
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 75322 22246778888889999999999998754
No 165
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.46 E-value=2.2e-07 Score=92.09 Aligned_cols=121 Identities=16% Similarity=0.213 Sum_probs=72.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC---CCCCCC-CCcc---cc--CCC-----------------
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA---PYERPA-LTKG---YL--FPL----------------- 104 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~---~~~~~~-l~~~---~~--~~~----------------- 104 (488)
++||+|||||++|+++|..|++.|+ +|+|+|+.+.. .-.+.. +... .+ ...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGI---DNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTC---CEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEE
Confidence 4799999999999999999999988 89999997631 000000 0000 00 000
Q ss_pred -CCCCCCCCCccccc-CCC--------CCCCCHhHHHHCCcEEEeCCcEEEEeCCC---cEEEe-CCCc--EEEeccEEe
Q 011322 105 -DKKPARLPGFHTCV-GSG--------GERQTPEWYKEKGIEMIYQDPVTSIDIEK---QTLIT-NSGK--LLKYGSLIV 168 (488)
Q Consensus 105 -~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~v~~~~~~~v~~id~~~---~~v~~-~~g~--~i~yd~lVl 168 (488)
......+ .+.... +.. ....+.+.+.+.+++++.+++|+++..+. ..|++ .+|+ ++.+|.||.
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~ 157 (394)
T 1k0i_A 79 FAGQRRRI-DLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAG 157 (394)
T ss_dssp ETTEEEEE-CHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEE
T ss_pred ECCceEEe-ccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEE
Confidence 0000000 000000 000 00011223345699999999999997642 46776 6887 799999999
Q ss_pred cCCCCCC
Q 011322 169 ATGCTAS 175 (488)
Q Consensus 169 AtG~~~~ 175 (488)
|+|....
T Consensus 158 AdG~~S~ 164 (394)
T 1k0i_A 158 CDGFHGI 164 (394)
T ss_dssp CCCTTCS
T ss_pred CCCCCcH
Confidence 9998654
No 166
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.44 E-value=2.8e-07 Score=92.42 Aligned_cols=96 Identities=24% Similarity=0.350 Sum_probs=72.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhCC--CcEEEEecCCCCcccccCHH----------HHHHHHHHHHHcCcEEEcCCeEEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQRLFTPS----------LAQRYEQLYQQNGVKFVKGASIKNL 275 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g--~~vtlv~~~~~~~~~~~~~~----------~~~~~~~~l~~~GV~v~~~~~v~~i 275 (488)
|+|+|||+|+.|+.+|..|++++ .+||++++++.+.....-+. +...+.+.+++.||+++.+ ++++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 68999999999999999999865 68999999875432111111 1112335567789999877 69999
Q ss_pred EeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 276 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 276 ~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
+.+ .. .|++++|+++++|.+|+|||.++.
T Consensus 82 d~~-~~---~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DPD-AN---TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ETT-TT---EEEETTCCEEECSEEEECCCCEEE
T ss_pred ECC-CC---EEEECCCCEEECCEEEEeCCCCcc
Confidence 854 22 578899999999999999998753
No 167
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.43 E-value=1e-06 Score=91.56 Aligned_cols=141 Identities=15% Similarity=0.171 Sum_probs=93.4
Q ss_pred ecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhh----cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 011322 168 VATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE----KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 243 (488)
Q Consensus 168 lAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~----~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~ 243 (488)
.++.++.......|....++....+...+...+...+. ..-.|+|||+|..|+.+|..|++.|.+|+++++.+.+.
T Consensus 78 ~c~~ch~~~~~~~p~~~~~~~~~w~~~~~~~~i~~~i~~~~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~g 157 (566)
T 1qo8_A 78 YCNECHSFDIKPMPFSDAKKKKSWDDGWDQDKIQKAIAAGPSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSG 157 (566)
T ss_dssp GGGGTCCCCCCCCTTTTSCCCCCSCCCCCHHHHHHHHHTCCSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred hhhhhcCCCcCCCCCCCCCCCcccccccccHHHHHhhccCCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 45555544323334444444444443333333322222 22369999999999999999999999999999875331
Q ss_pred cc------------------------------------------------------------------------------
Q 011322 244 QR------------------------------------------------------------------------------ 245 (488)
Q Consensus 244 ~~------------------------------------------------------------------------------ 245 (488)
..
T Consensus 158 g~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~ 237 (566)
T 1qo8_A 158 GNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVD 237 (566)
T ss_dssp TTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSC
T ss_pred CcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCC
Confidence 10
Q ss_pred -c--------cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeC--CCc--EEEcCEEEEeecCcCC
Q 011322 246 -L--------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPT 308 (488)
Q Consensus 246 -~--------~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~--~g~--~i~~D~vi~a~G~~p~ 308 (488)
. ....+...+.+.+++.||++++++.++++..++++++.+|.+. +|+ ++.+|.||+|+|....
T Consensus 238 r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 238 RTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp CEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred ceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 0 0122445566777888999999999999986543777667664 675 6899999999997553
No 168
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.42 E-value=4.3e-07 Score=89.13 Aligned_cols=35 Identities=14% Similarity=0.316 Sum_probs=32.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
++||+|||||++|+++|++|++.|. +|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~---~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGL---NVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTC---CEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCC
Confidence 4799999999999999999999987 8999999764
No 169
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.42 E-value=1.2e-06 Score=82.72 Aligned_cols=99 Identities=12% Similarity=0.257 Sum_probs=76.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc---------cc---ccCHHHHHHHHHHHHHc-CcEEEcCCeEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL---------QR---LFTPSLAQRYEQLYQQN-GVKFVKGASIKN 274 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~---------~~---~~~~~~~~~~~~~l~~~-GV~v~~~~~v~~ 274 (488)
.+++|||+|+.|+.+|..|++.|.+|+++++.+... +. ....++...+.+.+++. +++++.+ +++.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 479999999999999999999999999999753211 00 11235667777777776 7888765 8999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 275 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 275 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
++..+++ ..+.+.+|+++.+|.||+|+|..|..
T Consensus 82 i~~~~~~--~~v~~~~g~~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 82 AKGSFGE--FIVEIDGGRRETAGRLILAMGVTDEL 114 (297)
T ss_dssp EEEETTE--EEEEETTSCEEEEEEEEECCCCEEEC
T ss_pred EEEcCCe--EEEEECCCCEEEcCEEEECCCCCCCC
Confidence 9865332 36788899999999999999998754
No 170
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.39 E-value=5.6e-07 Score=89.60 Aligned_cols=96 Identities=20% Similarity=0.328 Sum_probs=74.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
.++|+|||||+.|+.+|..|++.|. +|+++++.+... +. .+ ...+ .....+.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~----~~------~~~~-----------~~~l~~~l 197 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGV---HVSLVETQPRLM---SR----AA------PATL-----------ADFVARYH 197 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---TT----TS------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---EEEEEEeCCccc---cc----cc------CHHH-----------HHHHHHHH
Confidence 5899999999999999999999986 899999876421 00 00 0000 01234567
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCC
Q 011322 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
++.|++++.+++|.+++ ++ .|++.+|+++++|.+|+|+|..|.
T Consensus 198 ~~~GV~i~~~~~v~~i~-~~-~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 198 AAQGVDLRFERSVTGSV-DG-VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp HHTTCEEEESCCEEEEE-TT-EEEETTSCEEECSEEEECSCEEEC
T ss_pred HHcCcEEEeCCEEEEEE-CC-EEEECCCCEEEcCEEEECcCCCcc
Confidence 88999999999999998 44 888899999999999999998764
No 171
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.39 E-value=1.7e-06 Score=82.49 Aligned_cols=98 Identities=16% Similarity=0.320 Sum_probs=76.5
Q ss_pred eEEEECCcHHHHHHHHHHHhCCC-cEEEEecCCC---C--------ccc---cc-CHHHHHHHHHHHHHcCcEEEcCCeE
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH---L--------LQR---LF-TPSLAQRYEQLYQQNGVKFVKGASI 272 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~-~vtlv~~~~~---~--------~~~---~~-~~~~~~~~~~~l~~~GV~v~~~~~v 272 (488)
+++|||+|+.|+.+|..|++.|. +|+++++... + .+. .. ...+.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999998521 0 111 11 246677788888889999998 689
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 273 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 273 ~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
+.++..+ +. ..+.+.+|+++.+|.||+|+|..|..
T Consensus 82 ~~i~~~~-~~-~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 82 QRVSKKD-SH-FVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp EEEEEET-TE-EEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEcC-CE-EEEEEcCCCEEECCEEEECCCCCCCC
Confidence 8887643 32 24667888899999999999987754
No 172
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.39 E-value=4.1e-07 Score=90.38 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=32.2
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
.+|+||||||||+++|..|+++|+ +|+|+|+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~---~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGI---KVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC---CEEEEecCCCC
Confidence 589999999999999999999998 89999998654
No 173
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.39 E-value=1.9e-06 Score=82.77 Aligned_cols=100 Identities=22% Similarity=0.257 Sum_probs=76.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC---C--------cccc----cCHHHHHHHHHHHHHcCcEEEcCCeE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQRL----FTPSLAQRYEQLYQQNGVKFVKGASI 272 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~---~--------~~~~----~~~~~~~~~~~~l~~~GV~v~~~~~v 272 (488)
.+++|||+|+.|+.+|..|++.|.+|+++++... + .+.. ...++.+.+.+.+++.|++++. .++
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 5799999999999999999999999999998721 0 1110 1235677778888899999998 578
Q ss_pred EEEEeC--CCCcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 273 KNLEAG--SDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 273 ~~i~~~--~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
+.++.. ++... .+.+.+|+++.+|.||+|+|..|..
T Consensus 88 ~~i~~~~~~~~~~-~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 88 QGVQHDATSHPYP-FTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEECTTSSSCC-EEEEESSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceE-EEEECCCCEEEeCEEEECcCCCcCC
Confidence 888764 22212 4566788899999999999998764
No 174
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.38 E-value=2.5e-06 Score=86.35 Aligned_cols=103 Identities=17% Similarity=0.241 Sum_probs=77.0
Q ss_pred CeEEEECCcHHHHHHHHHHHh---CCCc---EEEEecCCCCcccc-----------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVG---WKLD---TTIIFPENHLLQRL----------------------------------- 246 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~---~g~~---vtlv~~~~~~~~~~----------------------------------- 246 (488)
++|+|||+|+.|+.+|..|++ .|.+ |+++++.+.+....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 9999 99999875421000
Q ss_pred -c---------------CHHHHHHHHHHHHHcCcE--EEcCCeEEEEEeCCCCcEEEEEeCC---C--cEEEcCEEEEee
Q 011322 247 -F---------------TPSLAQRYEQLYQQNGVK--FVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGI 303 (488)
Q Consensus 247 -~---------------~~~~~~~~~~~l~~~GV~--v~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~vi~a~ 303 (488)
+ ...+.+++.+.+++.|++ ++++++|+.++..+++....|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 0 134566777778888998 9999999999865432122455544 4 578999999999
Q ss_pred c--CcCCCh
Q 011322 304 G--AKPTVS 310 (488)
Q Consensus 304 G--~~p~~~ 310 (488)
| ..|...
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 677643
No 175
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.38 E-value=2.8e-06 Score=85.56 Aligned_cols=111 Identities=24% Similarity=0.396 Sum_probs=85.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc------------------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------------ 245 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~------------------------------------------ 245 (488)
..|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 47999999999999999999999999999987532100
Q ss_pred -------------------cc-----CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEE
Q 011322 246 -------------------LF-----TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVI 301 (488)
Q Consensus 246 -------------------~~-----~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~ 301 (488)
.+ ...+.+.+.+.+++.||+++++++|+++..+ ++.+..|.+.+|+++.+|.||+
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEE
Confidence 00 0234456667778899999999999999864 4565678888998899999999
Q ss_pred eecCcCCC---------hhhHhcCCcc
Q 011322 302 GIGAKPTV---------SPFERVGLNS 319 (488)
Q Consensus 302 a~G~~p~~---------~~~~~~gl~~ 319 (488)
|+|..+.. .+++.+|+..
T Consensus 186 AtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 186 AVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp CCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred CCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 99987721 3456666543
No 176
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.38 E-value=1e-06 Score=90.89 Aligned_cols=101 Identities=13% Similarity=0.139 Sum_probs=80.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc----------------------------------cc--cCHHH
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------------------------------RL--FTPSL 251 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~----------------------------------~~--~~~~~ 251 (488)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+-. .. -.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 4799999999999999999999999999998754310 00 12567
Q ss_pred HHHHHHHHHHcCc--EEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeec--CcCC
Q 011322 252 AQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--AKPT 308 (488)
Q Consensus 252 ~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G--~~p~ 308 (488)
..++.+..++.|+ .+.++++|++++.+++.....|.+++|+++.||.||+|+| .+|.
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR 150 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC--
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc
Confidence 7788888888888 7899999999986554444578889999999999999999 5554
No 177
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.36 E-value=4.8e-07 Score=89.85 Aligned_cols=100 Identities=22% Similarity=0.283 Sum_probs=73.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCC--CcEEEEecCCCCcccccCHHHH---------HHHHHHHHHcCcEEEcCCeEEEE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQRLFTPSLA---------QRYEQLYQQNGVKFVKGASIKNL 275 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g--~~vtlv~~~~~~~~~~~~~~~~---------~~~~~~l~~~GV~v~~~~~v~~i 275 (488)
+|+|+|||+|+.|+.+|..|++.+ .+|+++++.+......+...+. ..-.+.+.+.||+++.+ +++.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 799999999999999999998765 5899999887533221111110 01123456789999876 68899
Q ss_pred EeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChh
Q 011322 276 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP 311 (488)
Q Consensus 276 ~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~ 311 (488)
+.+ .+ .+.+.+|+++++|.+|+|+|.+++...
T Consensus 81 d~~--~~--~v~~~~g~~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 81 DPD--KK--LVKTAGGAEFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp ETT--TT--EEEETTSCEEECSEEEECCCEEECGGG
T ss_pred Ecc--Cc--EEEecccceeecceeeeccCCccccCC
Confidence 853 22 478899999999999999999887543
No 178
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.36 E-value=3e-07 Score=91.57 Aligned_cols=98 Identities=21% Similarity=0.337 Sum_probs=74.5
Q ss_pred CeEEEECCcHHHHHHHHHHHh---CCCcEEEEecCCCCcccc----------cCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------FTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~---~g~~vtlv~~~~~~~~~~----------~~~~~~~~~~~~l~~~GV~v~~~~~v~~ 274 (488)
++|+|||||+.|+.+|..|++ .|.+|+++++.+.+.... ...++...+.+.+++.|++++.+ +++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 899999999887542210 11223344666777889999988 8999
Q ss_pred EEeCCCCcEEEEEeCCCc----EEEcCEEEEeecCcCCCh
Q 011322 275 LEAGSDGRVAAVKLEDGS----TIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 275 i~~~~~~~v~~v~~~~g~----~i~~D~vi~a~G~~p~~~ 310 (488)
++.+ +. .|.+.+++ ++.+|.||+|+|.+|+..
T Consensus 81 i~~~-~~---~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAK-SS---MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETT-TT---EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeCC-CC---EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 9853 22 35566665 399999999999988754
No 179
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.35 E-value=5.5e-07 Score=91.20 Aligned_cols=98 Identities=21% Similarity=0.283 Sum_probs=75.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+. ..+ .....+.
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~~G~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 216 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRSFGS---EVTVVALEDRLL---FQFD-----------PLL-----------SATLAEN 216 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEEcCCccc---cccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999986 899999875421 0000 000 0123566
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--cEEEeCCCc-EEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGK-LLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~--~~v~~~~g~-~i~yd~lVlAtG~~~~ 175 (488)
+++.+++++.+++|.+++.+. ..+++.+|+ ++.+|.||+|+|..|.
T Consensus 217 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 217 MHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp HHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 788999999999999998643 467788898 8999999999998775
No 180
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.35 E-value=1.8e-06 Score=83.29 Aligned_cols=98 Identities=16% Similarity=0.237 Sum_probs=76.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEec----CCCCc------------cc----ccCHHHHHHHHHHHHHcCcEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFP----ENHLL------------QR----LFTPSLAQRYEQLYQQNGVKFV 267 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~----~~~~~------------~~----~~~~~~~~~~~~~l~~~GV~v~ 267 (488)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+. +. ....++...+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5799999999999999999999999999997 22110 00 1124677778888889999999
Q ss_pred cCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 268 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 268 ~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
.++ ++.++..+ +.+ .|.+ +|+++.+|.||+|+|..|..
T Consensus 89 ~~~-v~~i~~~~-~~~-~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 89 TET-VTKVDFSS-KPF-KLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CCC-CCEEECSS-SSE-EEEC-SSEEEEEEEEEECCCEEECC
T ss_pred EeE-EEEEEEcC-CEE-EEEE-CCcEEEcCEEEECCCCCcCC
Confidence 986 88887543 332 4566 77889999999999998764
No 181
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.35 E-value=6.8e-07 Score=88.24 Aligned_cols=98 Identities=13% Similarity=0.174 Sum_probs=74.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
.++++|||||+.|+.+|..|++.|. +|+++++.+...-. .+ ...+ .....+.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~~~~-------~~------~~~~-----------~~~l~~~l 197 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGY---QLDVVAPCEQVMPG-------LL------HPAA-----------AKAVQAGL 197 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSSTT-------TS------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCcchhhc-------cc------CHHH-----------HHHHHHHH
Confidence 6899999999999999999999986 89999987542100 00 0000 01234566
Q ss_pred HHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCC
Q 011322 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
++.+++++.+++|.+++.+.. .+++.+|+++.+|.+|+|+|..|.
T Consensus 198 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 198 EGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp HTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcC
Confidence 778999999999999976543 677788989999999999998765
No 182
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.35 E-value=2.9e-06 Score=80.79 Aligned_cols=99 Identities=10% Similarity=0.164 Sum_probs=70.1
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC----------Ccc--cccCHHHHHHHHHHHHHcC-cEEEcCCeEEEE
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH----------LLQ--RLFTPSLAQRYEQLYQQNG-VKFVKGASIKNL 275 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~----------~~~--~~~~~~~~~~~~~~l~~~G-V~v~~~~~v~~i 275 (488)
.|+|||+|+.|+.+|..+++.|.+|+++++... +.. ...++++.+...+.+.+.+ +.++. ..+..+
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 86 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYE-KTVVMI 86 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEE-CCEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEe-eEEEEe
Confidence 589999999999999999999999999987531 000 1112345555555555554 45544 455666
Q ss_pred EeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 276 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 276 ~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
...+++. ..+.+.+|+++.+|.||+|||.+|..
T Consensus 87 ~~~~~~~-~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 87 TKQSTGL-FEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp EECTTSC-EEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred eecCCCc-EEEEECCCCEEEeCEEEEccCCcccc
Confidence 5444443 36888999999999999999998754
No 183
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.35 E-value=4.1e-06 Score=82.55 Aligned_cols=98 Identities=20% Similarity=0.296 Sum_probs=72.2
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc-------------------------------------------
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------------- 245 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~------------------------------------------- 245 (488)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+-..
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 4899999999999999999999999999986432100
Q ss_pred ------------ccC-HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe-CCC--cEEEcCEEEEeecCcC
Q 011322 246 ------------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL-EDG--STIDADTIVIGIGAKP 307 (488)
Q Consensus 246 ------------~~~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~-~~g--~~i~~D~vi~a~G~~p 307 (488)
.++ ..+...+.+..++.|++++.+++++.+... ++.+..+.. .++ .++.+|+||-|.|...
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 000 234556667778889999999999998764 454444433 233 3689999999999653
No 184
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.34 E-value=5.7e-07 Score=90.73 Aligned_cols=98 Identities=14% Similarity=0.120 Sum_probs=75.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+.. .+ .....+.
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 217 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLGA---KTHLFEMFDAPL---PSFDP-----------MI-----------SETLVEV 217 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCC---EEEEEEeCCchh---hhhhH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999875421 00000 00 1123556
Q ss_pred HHHCCcEEEeCCcEEEEeCCC---cEEEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~---~~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.+++++.+++|.+++.+. ..+++.+|+++.+|.||+|+|..|.
T Consensus 218 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 218 MNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp HHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 778899999999999998653 3678888988999999999998765
No 185
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.34 E-value=4.6e-06 Score=81.53 Aligned_cols=98 Identities=17% Similarity=0.266 Sum_probs=75.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCC-cEEEEecCC------C------Cccc----------------------------c
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPEN------H------LLQR----------------------------L 246 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~-~vtlv~~~~------~------~~~~----------------------------~ 246 (488)
.+|+|||+|+.|+.+|..|++.|. +|+++++.+ . ++.. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 469999999999999999999999 999999875 0 0000 0
Q ss_pred -cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 247 -FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 247 -~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
....+...+.+.+++.|++++.++.|++++..+++ . .|.+.++ ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY-Y-TIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-E-EEEeCCC-EEEeCEEEECCCCCCc
Confidence 01345566777778899999999999999865333 2 4666776 5999999999999754
No 186
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=5.8e-07 Score=88.11 Aligned_cols=99 Identities=23% Similarity=0.315 Sum_probs=73.3
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc-c---------ccC-HHHHHHHHHHHHHcCcEEEcCCeEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-R---------LFT-PSLAQRYEQLYQQNGVKFVKGASIKN 274 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~-~---------~~~-~~~~~~~~~~l~~~GV~v~~~~~v~~ 274 (488)
.+.+++|||+|+.|+.+|..|++.| +|+++++.+.+.. + ..+ .++.....+.+++.||+++.++.++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 4789999999999999999999999 9999998865321 0 011 11112234567788999999999999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh
Q 011322 275 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 275 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
++.. .. .|. .+|+++.+|.+|+|||.+|...
T Consensus 86 id~~-~~---~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 86 IDRG-RK---VVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EETT-TT---EEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EECC-CC---EEE-ECCcEEECCEEEECCCCCCCCC
Confidence 9853 22 344 6778899999999999988743
No 187
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.33 E-value=1e-06 Score=90.30 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=33.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
..+||||||||+||++||..|++.|. +|+||||.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~---~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGA---DVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 35799999999999999999999987 89999998753
No 188
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.33 E-value=1.6e-06 Score=86.87 Aligned_cols=102 Identities=24% Similarity=0.423 Sum_probs=76.3
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCC--cEEEEecCCCCcc------c-ccC-----HHHHHHHHHHHHHcCcEEEcCCeE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLLQ------R-LFT-----PSLAQRYEQLYQQNGVKFVKGASI 272 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~--~vtlv~~~~~~~~------~-~~~-----~~~~~~~~~~l~~~GV~v~~~~~v 272 (488)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+.. . .+. ..+.....+.+++.||+++.++.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999998 7999998754321 0 000 011111235667889999999999
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhh
Q 011322 273 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 312 (488)
Q Consensus 273 ~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 312 (488)
+.++.. +. .|.+++|+++.+|.+|+|||.+|....+
T Consensus 84 ~~i~~~-~~---~v~~~~g~~~~~d~lviAtG~~p~~~~i 119 (431)
T 1q1r_A 84 TAINRD-RQ---QVILSDGRALDYDRLVLATGGRPRPLPV 119 (431)
T ss_dssp EEEETT-TT---EEEETTSCEEECSEEEECCCEEECCCGG
T ss_pred EEEECC-CC---EEEECCCCEEECCEEEEcCCCCccCCCC
Confidence 999853 22 4777889899999999999999875433
No 189
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.33 E-value=9.6e-07 Score=87.78 Aligned_cols=97 Identities=23% Similarity=0.417 Sum_probs=74.7
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCC--cEEEEecCCCCccc-------cc-----CHHHHHHHHHHHHHcCcEEEcCCeEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLLQR-------LF-----TPSLAQRYEQLYQQNGVKFVKGASIK 273 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~--~vtlv~~~~~~~~~-------~~-----~~~~~~~~~~~l~~~GV~v~~~~~v~ 273 (488)
++++|||+|+.|+.+|..|++.|. +|+++++.+.+... .+ ...+.....+.+++.|++++. ++++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 89999987632110 00 111222345667788999999 8999
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 274 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 274 ~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
.++.. .. .+.+.+|+++.+|.+|+|||.+|..
T Consensus 81 ~id~~-~~---~v~~~~g~~~~~d~lvlAtG~~p~~ 112 (404)
T 3fg2_P 81 SIDRE-GR---KLLLASGTAIEYGHLVLATGARNRM 112 (404)
T ss_dssp EEETT-TT---EEEESSSCEEECSEEEECCCEEECC
T ss_pred EEECC-CC---EEEECCCCEEECCEEEEeeCCCccC
Confidence 99853 22 4788899999999999999998764
No 190
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.32 E-value=4.5e-07 Score=91.71 Aligned_cols=97 Identities=22% Similarity=0.308 Sum_probs=72.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||++|+.+|..|++.|. +|+|+++.+... |.+. ..+ .....+.
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 221 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGA---QVSVVEARERIL---PTYD-----------SEL-----------TAPVAES 221 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCC---eEEEEEcCCccc---cccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999986 899999876521 0000 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeC--CC--cEEEeccEEecCCCCCCc
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQTLITN--SG--KLLKYGSLIVATGCTASR 176 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~~v~~~--~g--~~i~yd~lVlAtG~~~~~ 176 (488)
+++.+++++.+++|.+++. +. +.+. +| +++.+|.||+|+|..|..
T Consensus 222 l~~~gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 222 LKKLGIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHHTCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred HHHCCCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCcCC
Confidence 6788999999999999987 43 4443 56 579999999999988763
No 191
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.32 E-value=2.8e-06 Score=84.60 Aligned_cols=99 Identities=23% Similarity=0.412 Sum_probs=75.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCc--EEEEecCCCCccc--ccCHHHH---------HHHHHHHHHcCcEEEcCCeEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLD--TTIIFPENHLLQR--LFTPSLA---------QRYEQLYQQNGVKFVKGASIKN 274 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~--vtlv~~~~~~~~~--~~~~~~~---------~~~~~~l~~~GV~v~~~~~v~~ 274 (488)
++++|||+|+.|+.+|..|++.|.+ |+++++.+.+... .+...+. ....+.+++.|++++.+++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 5899999999999999999999987 9999988654211 1111111 1123456788999999999999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh
Q 011322 275 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 275 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
++.. .. .|.+.+|+++.+|.+|+|||.+|...
T Consensus 83 id~~-~~---~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 83 LDVQ-TR---TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EETT-TT---EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EECC-CC---EEEECCCCEEECCEEEEccCCcccCC
Confidence 9853 22 57788999999999999999987643
No 192
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.32 E-value=3.3e-06 Score=83.68 Aligned_cols=100 Identities=15% Similarity=0.123 Sum_probs=78.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc-------------------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------------------------------- 244 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~------------------------------------------- 244 (488)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998754300
Q ss_pred --c--------------ccCHHHHHHHHHHHHHc-CcEEEcCCeEEEEEeCCCCcEE-EEEeCCCcEEEcCEEEEeecCc
Q 011322 245 --R--------------LFTPSLAQRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVA-AVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 245 --~--------------~~~~~~~~~~~~~l~~~-GV~v~~~~~v~~i~~~~~~~v~-~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
. .....+.+.+.+.+++. |+++++++++++++.+++ .+. .+++.+|+++.+|.||.|+|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~-~v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDER-HAIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC-ceEEEEEECCCCEEECCEEEECCCCC
Confidence 0 00024556666777776 999999999999987544 342 5788899899999999999997
Q ss_pred CC
Q 011322 307 PT 308 (488)
Q Consensus 307 p~ 308 (488)
+.
T Consensus 166 s~ 167 (399)
T 2x3n_A 166 SY 167 (399)
T ss_dssp CH
T ss_pred hH
Confidence 64
No 193
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.32 E-value=6.3e-07 Score=90.82 Aligned_cols=98 Identities=12% Similarity=0.208 Sum_probs=73.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... +.. ...+ .....+.
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~-----------~~~~-----------~~~l~~~ 219 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRRLGA---EVTLIEYMPEIL---PQG-----------DPET-----------AALLRRA 219 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTS-----------CHHH-----------HHHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCC---eEEEEEcCCccc---ccc-----------CHHH-----------HHHHHHH
Confidence 35799999999999999999999886 899999875421 000 0000 0123556
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeC-C--Cc--EEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN-S--GK--LLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~-~--g~--~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.+++|++++.+.. .+++. + |+ ++++|.||+|+|..|.
T Consensus 220 l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 220 LEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp HHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred HHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 7788999999999999986553 45554 5 76 7999999999998775
No 194
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.32 E-value=4.4e-07 Score=84.53 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=33.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
|+.||+|||||||||+||..|+++|+ +|+|+|+.+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~---~V~v~Ek~~~~ 37 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRGS 37 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCC
Confidence 35799999999999999999999998 89999998754
No 195
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.31 E-value=1.4e-06 Score=87.58 Aligned_cols=95 Identities=15% Similarity=0.274 Sum_probs=75.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
.++++|||||+.|+.+|..+++.|. +|+|+++.+... ...+. .+ .....+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~ll-----------~~~d~---~~-----------~~~~~~~l 198 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGL---HPTLIHRSDKIN-----------KLMDA---DM-----------NQPILDEL 198 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC---EEEEEESSSCCS-----------TTSCG---GG-----------GHHHHHHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCC---cceeeeeecccc-----------ccccc---hh-----------HHHHHHHh
Confidence 5689999999999999999999987 899999875421 00000 00 12345677
Q ss_pred HHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCC
Q 011322 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
++.+++++.+++|.+++. ..+++.+|+++++|.+++|+|..|.
T Consensus 199 ~~~gV~i~~~~~v~~~~~--~~v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 199 DKREIPYRLNEEINAING--NEITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp HHTTCCEEESCCEEEEET--TEEEETTSCEEECSEEEECCCEEES
T ss_pred hccceEEEeccEEEEecC--CeeeecCCeEEeeeeEEEEeceecC
Confidence 889999999999998874 5788999999999999999998765
No 196
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.30 E-value=3.8e-07 Score=91.51 Aligned_cols=98 Identities=22% Similarity=0.312 Sum_probs=74.5
Q ss_pred CeEEEECCcHHHHHHHHHHHh--CCCcEEEEecCCCCccccc----------CHHHHHHHHHHHHHcCcEEEcCCeEEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVG--WKLDTTIIFPENHLLQRLF----------TPSLAQRYEQLYQQNGVKFVKGASIKNL 275 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~--~g~~vtlv~~~~~~~~~~~----------~~~~~~~~~~~l~~~GV~v~~~~~v~~i 275 (488)
++|+|||+|+.|+.+|..|++ .+.+|+++++.+.+..... ..++...+.+.+++.|++++.+ +++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 689999999999999999999 7889999999876532110 0111122344566789999975 89999
Q ss_pred EeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh
Q 011322 276 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 276 ~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
+.+ .. .+.+++|+++.+|.+|+|+|.+|+..
T Consensus 82 d~~-~~---~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPD-AN---TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETT-TT---EEEETTCCEEECSEEEECCCCEEECC
T ss_pred ECC-CC---EEEECCCcEEECCEEEEcCCcccccC
Confidence 853 22 57788998999999999999987643
No 197
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.30 E-value=3.5e-07 Score=91.18 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=32.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCc-EEEEcCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGR-LCIVSKEAY 88 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~-V~lie~~~~ 88 (488)
++++|+|||||++|+++|..|++.|+ + |+|+|+.+.
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~---~~v~v~E~~~~ 39 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGI---GKVTLLESSSE 39 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC---SEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC---CeEEEEECCCC
Confidence 45899999999999999999999987 8 999999865
No 198
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.29 E-value=2.1e-06 Score=85.05 Aligned_cols=35 Identities=26% Similarity=0.522 Sum_probs=32.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
++||+|||||++|+++|+.|+++|. +|+|||+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~---~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGH---RVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCC
Confidence 4799999999999999999999987 7999999764
No 199
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.29 E-value=1.3e-06 Score=89.28 Aligned_cols=98 Identities=14% Similarity=0.196 Sum_probs=75.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
.++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~l 227 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGI---DSYIFARGNRIL---RKFDE-----------SV-----------INVLENDM 227 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCC---eEEEEecCCccC---cccch-----------hh-----------HHHHHHHH
Confidence 6799999999999999999999876 899999875421 00000 00 01235667
Q ss_pred HHCCcEEEeCCcEEEEeCCC---cEEEeCCCcE-EEeccEEecCCCCCCc
Q 011322 131 KEKGIEMIYQDPVTSIDIEK---QTLITNSGKL-LKYGSLIVATGCTASR 176 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~~~---~~v~~~~g~~-i~yd~lVlAtG~~~~~ 176 (488)
++.|++++++++|.+++.+. ..+++.+|++ +.+|.||+|+|..|..
T Consensus 228 ~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 228 KKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred HhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 88999999999999998643 3678888887 9999999999988763
No 200
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.29 E-value=3.6e-06 Score=86.42 Aligned_cols=103 Identities=21% Similarity=0.277 Sum_probs=80.1
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCC--CCc-----------ccccCHHHHHHHHHHHHHcCcEEEcCCeEE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--HLL-----------QRLFTPSLAQRYEQLYQQNGVKFVKGASIK 273 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~--~~~-----------~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~ 273 (488)
..+++|||||+.|+.+|..|++.|.+|+++++.. .+. +....+++...+.+.+++.|++++.+++++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 4579999999999999999999999999997531 111 001234677788888899999999999999
Q ss_pred EEEeCCC-CcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 274 NLEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 274 ~i~~~~~-~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
.++...+ +....|.+++|+++.+|.||+|+|.+|..
T Consensus 292 ~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 292 KLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 9974321 22246788899899999999999988753
No 201
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.28 E-value=5.9e-06 Score=85.94 Aligned_cols=100 Identities=17% Similarity=0.166 Sum_probs=77.7
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc------------------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------------ 245 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~------------------------------------------ 245 (488)
..|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDP 206 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 57999999999999999999999999999987543210
Q ss_pred ---------------------------------------------ccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCC
Q 011322 246 ---------------------------------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 280 (488)
Q Consensus 246 ---------------------------------------------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~ 280 (488)
..+..+...+.+.+++.||+++++++++++..+++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 286 (571)
T 1y0p_A 207 ALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK 286 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT
T ss_pred HHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC
Confidence 00123445566777888999999999999986544
Q ss_pred CcEEEEEeC--CCc--EEEcCEEEEeecCcC
Q 011322 281 GRVAAVKLE--DGS--TIDADTIVIGIGAKP 307 (488)
Q Consensus 281 ~~v~~v~~~--~g~--~i~~D~vi~a~G~~p 307 (488)
+++.+|.+. +|+ ++.+|.||+|+|...
T Consensus 287 g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 287 GTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp SCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred CeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 777666665 675 689999999999754
No 202
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.27 E-value=1.1e-06 Score=88.62 Aligned_cols=98 Identities=17% Similarity=0.251 Sum_probs=73.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||++|+.+|..|++.|. +|+|+++.+...- . .+ ...+ .....+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~------~-~~------~~~~-----------~~~l~~~ 200 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGK---KVTVIDILDRPLG------V-YL------DKEF-----------TDVLTEE 200 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTT------T-TC------CHHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---eEEEEecCccccc------c-cC------CHHH-----------HHHHHHH
Confidence 46899999999999999999999986 8999998764210 0 00 0000 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.++.|.+++.+++ .+.+ ++.++++|.||+|+|..|.
T Consensus 201 l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 201 MEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred HHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 6778999999999999987643 3555 5567999999999998775
No 203
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.26 E-value=4.6e-07 Score=93.64 Aligned_cols=45 Identities=20% Similarity=0.386 Sum_probs=35.7
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--c--EEEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK--Q--TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~--~--~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+.+.|++++.+ +|+++..+. . .|++.+|+++.+|.||.|+|....
T Consensus 175 a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 175 AVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 34579999998 899997642 2 577788888999999999998654
No 204
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.26 E-value=4.3e-06 Score=80.73 Aligned_cols=99 Identities=19% Similarity=0.303 Sum_probs=76.5
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCC---CC--------ccc----ccCHHHHHHHHHHHHHcCcEEEcCCe
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN---HL--------LQR----LFTPSLAQRYEQLYQQNGVKFVKGAS 271 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~---~~--------~~~----~~~~~~~~~~~~~l~~~GV~v~~~~~ 271 (488)
..+++|||+|+.|+.+|..|++.|.+|+++++.. .+ .+. ...+++.+.+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 4579999999999999999999999999998531 00 011 1124677777888888999999987
Q ss_pred EEEEEeCCCCcEEEE-EeCCCcEEEcCEEEEeecCcCCC
Q 011322 272 IKNLEAGSDGRVAAV-KLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 272 v~~i~~~~~~~v~~v-~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
+..++. ++.. .+ .+++|+++.+|.||+|+|..|..
T Consensus 93 v~~i~~--~~~~-~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 93 VESVSL--HGPL-KSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp EEEEEC--SSSS-EEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEe--CCcE-EEEEeCCCCEEEeCEEEECCCCCccC
Confidence 888875 2222 35 67888899999999999998764
No 205
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.25 E-value=2.9e-06 Score=87.41 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=31.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
..+||||||||+||++||.+|++ |. +|+||||.+.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~---~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QH---QVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TS---CEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CC---cEEEEECCCC
Confidence 35799999999999999999999 87 8999999864
No 206
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.25 E-value=4.6e-06 Score=84.02 Aligned_cols=102 Identities=19% Similarity=0.195 Sum_probs=75.6
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCC--cEEEEecCCCCcc----c---------------------------------c
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLLQ----R---------------------------------L 246 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~--~vtlv~~~~~~~~----~---------------------------------~ 246 (488)
..++|+|||+|+.|+.+|..|++.|. +|+++++.+.+.. . .
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35789999999999999999999999 9999998743210 0 0
Q ss_pred --------------c--------------CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC---Cc---
Q 011322 247 --------------F--------------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--- 292 (488)
Q Consensus 247 --------------~--------------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~---g~--- 292 (488)
+ ...+.+++.+..++.++.++++++|+.++..+ +. ..|++.+ |+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~-~~-~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD-GS-WVVTYKGTKAGSPIS 162 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET-TE-EEEEEEESSTTCCEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-Ce-EEEEEeecCCCCeeE
Confidence 0 01455666676667788899999999998643 32 2455544 66
Q ss_pred EEEcCEEEEeecC--cCCC
Q 011322 293 TIDADTIVIGIGA--KPTV 309 (488)
Q Consensus 293 ~i~~D~vi~a~G~--~p~~ 309 (488)
++.+|.||+|+|. .|+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEEESEEEECCCSSSSBCB
T ss_pred EEEeCEEEECCCCCCCCCC
Confidence 7999999999998 5553
No 207
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.25 E-value=1.3e-06 Score=88.88 Aligned_cols=99 Identities=15% Similarity=0.221 Sum_probs=75.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 235 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGS---ETHLVIRGETVL---RKFDE-----------CI-----------QNTITDH 235 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEEeCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 45799999999999999999999886 899999876421 00000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC----cEEEeCCC-cEEEeccEEecCCCCCCc
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK----QTLITNSG-KLLKYGSLIVATGCTASR 176 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~----~~v~~~~g-~~i~yd~lVlAtG~~~~~ 176 (488)
+++.|++++++++|.+++.+. ..+++.+| +++.+|.+|+|+|..|..
T Consensus 236 l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 236 YVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred HHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 778899999999999998642 36788888 789999999999987763
No 208
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=8.4e-07 Score=89.67 Aligned_cols=98 Identities=14% Similarity=0.279 Sum_probs=72.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... |.+. ..+ .....+.
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 220 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGT---KVTILEGAGEIL---SGFE-----------KQM-----------AAIIKKR 220 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEEcCCccc---cccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999986 899999875421 0000 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeC---CCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN---SGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~---~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.+++|.+++.+.. .+++. +++++++|.+|+|+|..|.
T Consensus 221 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 221 LKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp HHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 7788999999999999986553 34443 4567999999999998875
No 209
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.25 E-value=5e-06 Score=79.52 Aligned_cols=99 Identities=18% Similarity=0.251 Sum_probs=75.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC-----------Cccc----ccCHHHHHHHHHHHHHcCcEEEcCCeE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-----------LLQR----LFTPSLAQRYEQLYQQNGVKFVKGASI 272 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~-----------~~~~----~~~~~~~~~~~~~l~~~GV~v~~~~~v 272 (488)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+. ...+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 5799999999999999999999999999985410 0011 1224677778888889999999986 8
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh
Q 011322 273 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 273 ~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
+.++.. ++.+ .+ +.+++++.+|.+|+|+|.+|...
T Consensus 85 ~~i~~~-~~~~-~v-~~~~~~~~~~~lv~AtG~~~~~~ 119 (320)
T 1trb_A 85 NKVDLQ-NRPF-RL-NGDNGEYTCDALIIATGASARYL 119 (320)
T ss_dssp EEEECS-SSSE-EE-EESSCEEEEEEEEECCCEEECCC
T ss_pred eEEEec-CCEE-EE-EeCCCEEEcCEEEECCCCCcCCC
Confidence 888754 3333 34 56788899999999999987643
No 210
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.25 E-value=2.5e-06 Score=85.02 Aligned_cols=100 Identities=25% Similarity=0.361 Sum_probs=76.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCc--EEEEecCCCCccc-------cc-----CHHHHHHHHHHHHHcCcEEEcCCeE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLD--TTIIFPENHLLQR-------LF-----TPSLAQRYEQLYQQNGVKFVKGASI 272 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~--vtlv~~~~~~~~~-------~~-----~~~~~~~~~~~l~~~GV~v~~~~~v 272 (488)
.++|+|||+|+.|+.+|..|++.|.+ |+++++.+.+... .+ ...+.....+.+++.|++++.++++
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 88 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEV 88 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEE
Confidence 45799999999999999999999987 9999987643110 00 1122223356678899999999999
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh
Q 011322 273 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 273 ~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
+.++.. .. .+.+.+|+++.+|.+|+|||.+|...
T Consensus 89 ~~id~~-~~---~v~~~~g~~~~~d~lvlAtG~~~~~~ 122 (415)
T 3lxd_A 89 VSLDPA-AH---TVKLGDGSAIEYGKLIWATGGDPRRL 122 (415)
T ss_dssp EEEETT-TT---EEEETTSCEEEEEEEEECCCEECCCC
T ss_pred EEEECC-CC---EEEECCCCEEEeeEEEEccCCccCCC
Confidence 999853 22 57788999999999999999988643
No 211
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.24 E-value=1.5e-06 Score=88.79 Aligned_cols=98 Identities=17% Similarity=0.301 Sum_probs=75.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQT 126 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~---g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (488)
..++++|||||+.|+.+|..|++. |. +|+|+++.+... +.+.. .+ ....
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l 241 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGG---KVTLCYRNNLIL---RGFDE-----------TI-----------REEV 241 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTC---EEEEEESSSSSC---TTSCH-----------HH-----------HHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHH
Confidence 357999999999999999999998 76 899999876421 10000 00 0123
Q ss_pred HhHHHHCCcEEEeCCcEEEEeCCC---cEEEeCCCcEEEeccEEecCCCCCC
Q 011322 127 PEWYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 127 ~~~~~~~~v~~~~~~~v~~id~~~---~~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
.+.+++.+++++++++|.+++.+. ..+++.+|+++.+|.+|+|+|..|.
T Consensus 242 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 242 TKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp HHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 566788999999999999998653 3678888988999999999998765
No 212
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.24 E-value=1.4e-06 Score=91.04 Aligned_cols=98 Identities=19% Similarity=0.376 Sum_probs=77.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 237 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGI---EVTLVEMANQVM---PPIDY-----------EM-----------AAYVHEH 237 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCccc---ccCCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999886 899999775421 10000 00 0123466
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.++.|.+++.+...|++.+|+++.+|.+|+|+|..|.
T Consensus 238 l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 238 MKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp HHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCC
Confidence 7889999999999999988767899999999999999999998765
No 213
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.23 E-value=1.6e-06 Score=88.38 Aligned_cols=99 Identities=17% Similarity=0.258 Sum_probs=76.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQT 126 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~---g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (488)
..++++|||||+.|+.+|..|++. |. +|+++++.+... +.+. ..+ ....
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~~l---~~~d-----------~~~-----------~~~l 237 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGG---QVDLAYRGDMIL---RGFD-----------SEL-----------RKQL 237 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTC---EEEEEESSSSSS---TTSC-----------HHH-----------HHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcC---eEEEEEcCCCcc---cccC-----------HHH-----------HHHH
Confidence 357999999999999999999998 76 899999876421 0000 000 1124
Q ss_pred HhHHHHCCcEEEeCCcEEEEeCCC---cEEEeCCCcEEEeccEEecCCCCCCc
Q 011322 127 PEWYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 176 (488)
Q Consensus 127 ~~~~~~~~v~~~~~~~v~~id~~~---~~v~~~~g~~i~yd~lVlAtG~~~~~ 176 (488)
.+.+++.|++++.++.|.+++.+. ..+++.+|+++.+|.||+|+|..|..
T Consensus 238 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 238 TEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 566778999999999999998653 36788888889999999999987753
No 214
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.22 E-value=5.5e-06 Score=82.04 Aligned_cols=100 Identities=17% Similarity=0.275 Sum_probs=74.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc-----ccCHHHHH----------------------------
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----LFTPSLAQ---------------------------- 253 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~-----~~~~~~~~---------------------------- 253 (488)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... .+.+...+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987653211 01221111
Q ss_pred ---------------HHHHHHHH--cCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 254 ---------------RYEQLYQQ--NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 254 ---------------~~~~~l~~--~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
.+.+.|.+ .|+++++++++++++.++++ + .+++.+|+++.+|+||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET-V-QMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC-E-EEEETTSCEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE-E-EEEECCCCEEECCEEEECCCcchh
Confidence 12222222 38999999999999865443 3 588899999999999999998764
No 215
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.22 E-value=1.3e-05 Score=77.21 Aligned_cols=98 Identities=12% Similarity=0.131 Sum_probs=71.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc-------------------ccCHHHHHHHH------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------------------LFTPSLAQRYE------------ 256 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~-------------------~~~~~~~~~~~------------ 256 (488)
.+|+|||+|++|+.+|..|++.|.+|+++++.+.+-.+ ...+.+.+.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 47999999999999999999999999999988643110 01122222222
Q ss_pred -------------------------------HHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEE-cCEEEEeec
Q 011322 257 -------------------------------QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIG 304 (488)
Q Consensus 257 -------------------------------~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~-~D~vi~a~G 304 (488)
+.+. .|++++++++|++++..+++ + .|.+.+|+.+. +|.||.|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~-~-~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEH-W-NLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSC-E-EEEETTSCEEEEESEEEECSC
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCE-E-EEEeCCCcCccccCEEEEcCC
Confidence 2222 28899999999999876444 3 57788998764 999999999
Q ss_pred CcCC
Q 011322 305 AKPT 308 (488)
Q Consensus 305 ~~p~ 308 (488)
....
T Consensus 160 ~~~~ 163 (336)
T 1yvv_A 160 APQA 163 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7543
No 216
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.22 E-value=7e-06 Score=81.11 Aligned_cols=101 Identities=18% Similarity=0.187 Sum_probs=76.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC------cccc-----------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL------LQRL----------------------------------- 246 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~------~~~~----------------------------------- 246 (488)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ....
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 36999999999999999999999999999987531 0000
Q ss_pred -----------------cC-HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe-CCCc--EEEcCEEEEeecC
Q 011322 247 -----------------FT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGA 305 (488)
Q Consensus 247 -----------------~~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~-~~g~--~i~~D~vi~a~G~ 305 (488)
++ ..+.+.+.+.+.+.|+++++++++++++..+++.+ .|.+ .+|+ ++.+|+||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCC
Confidence 01 23445566667778999999999999986433333 4666 6887 7999999999999
Q ss_pred cCCC
Q 011322 306 KPTV 309 (488)
Q Consensus 306 ~p~~ 309 (488)
....
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 8753
No 217
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.21 E-value=7.4e-06 Score=83.73 Aligned_cols=35 Identities=17% Similarity=0.459 Sum_probs=31.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+++||+|||||++|+++|+.|+++|. +|+|+|+++
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~---~V~llE~~~ 36 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGL---SVLMLEAQD 36 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---CEEEEECCC
Confidence 45799999999999999999999987 799999975
No 218
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.20 E-value=8.2e-06 Score=80.19 Aligned_cols=63 Identities=16% Similarity=0.290 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcC
Q 011322 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 316 (488)
Q Consensus 250 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~g 316 (488)
.+...+.+.+++.|++++.+++|++++.. ++.+ .|.+.+| ++.+|.||+|+|.... .++...+
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~-~l~~~~~ 227 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSG-MFFKQLG 227 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTH-HHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHH-HHHHhcC
Confidence 35566777788899999999999999864 4445 6777777 7999999999998753 4555554
No 219
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.20 E-value=2.6e-06 Score=87.49 Aligned_cols=99 Identities=10% Similarity=0.090 Sum_probs=75.1
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
...+++++|||||+.|+..|..+++.|. +|||+++...++.. +. ++ .....
T Consensus 220 ~~lP~~lvIIGgG~IGlE~A~~~~~lG~---~VTii~~~~~L~~~------------D~---ei-----------~~~l~ 270 (542)
T 4b1b_A 220 KKDPGKTLVVGASYVALECSGFLNSLGY---DVTVAVRSIVLRGF------------DQ---QC-----------AVKVK 270 (542)
T ss_dssp SSCCCSEEEECCSHHHHHHHHHHHHHTC---CEEEEESSCSSTTS------------CH---HH-----------HHHHH
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhcCC---eEEEeccccccccc------------ch---hH-----------HHHHH
Confidence 3446899999999999999999999987 89999865332110 00 00 11245
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCC
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
..+++.+++++.+..+..+..... .+.+.++..+.+|.|++|+|-+|+
T Consensus 271 ~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 271 LYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp HHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCC
Confidence 677889999999999998876654 456678888999999999997665
No 220
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.20 E-value=8e-06 Score=78.16 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=75.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC---C--------ccc---ccCHHHHHHHHHHHHHcCcEEEcCCeE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQR---LFTPSLAQRYEQLYQQNGVKFVKGASI 272 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~---~--------~~~---~~~~~~~~~~~~~l~~~GV~v~~~~~v 272 (488)
..+++|||+|+.|+.+|..|++.|.+|+++++... + .+. ....++.+.+.+.+++.|++++. .++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 94 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEV 94 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeE
Confidence 35799999999999999999999999999998421 0 111 11245667777888889999998 688
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 273 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 273 ~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
+.++..+ +.+ .|.+ ++.++.+|.+|+|+|..|..
T Consensus 95 ~~i~~~~-~~~-~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 95 RSIKKTQ-GGF-DIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEEET-TEE-EEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEEEEeC-CEE-EEEE-CCCEEEeCEEEECCCCCccc
Confidence 8887543 222 3555 56789999999999988764
No 221
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.20 E-value=2e-06 Score=88.50 Aligned_cols=96 Identities=20% Similarity=0.236 Sum_probs=74.0
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (488)
++++|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ .....+.++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~l~ 266 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGR---RTVMLVRTEPLK---LIKD-----------NET-----------RAYVLDRMK 266 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCTTT---TCCS-----------HHH-----------HHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC---eEEEEEecCccc---cccc-----------HHH-----------HHHHHHHHH
Confidence 899999999999999999999986 899999876421 0000 000 112456678
Q ss_pred HCCcEEEeCCcEEEEeC--CC----cEEEeCCCc-EEEeccEEecCCCCCC
Q 011322 132 EKGIEMIYQDPVTSIDI--EK----QTLITNSGK-LLKYGSLIVATGCTAS 175 (488)
Q Consensus 132 ~~~v~~~~~~~v~~id~--~~----~~v~~~~g~-~i~yd~lVlAtG~~~~ 175 (488)
+.|++++.+++|++++. +. ..|++.+|+ ++.+|.||+|+|..|.
T Consensus 267 ~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~ 317 (523)
T 1mo9_A 267 EQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPR 317 (523)
T ss_dssp HTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEEC
T ss_pred hCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccC
Confidence 89999999999999986 33 347777887 8999999999998775
No 222
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.19 E-value=1.8e-06 Score=82.65 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=33.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 89 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~lie~~~~~ 89 (488)
..+||+|||||++|+++|..|+++ |. +|+|||+.+..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~---~V~LiEk~~~~ 116 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDL---RITIVEAGVAP 116 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTS---CEEEEESSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCC---EEEEEeCCCcc
Confidence 458999999999999999999997 66 89999998654
No 223
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.19 E-value=1.1e-06 Score=89.44 Aligned_cols=98 Identities=13% Similarity=0.168 Sum_probs=73.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+. ..+ .....+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 235 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLGS---RLDVVEMMDGLM---QGAD-----------RDL-----------VKVWQKQ 235 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEECCccc---cccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999986 899999876421 0000 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCC----CcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNS----GKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~~----g~~i~yd~lVlAtG~~~~ 175 (488)
+++.+++++++++|.+++.+.. .+++.+ |+++.+|.+|+|+|..|.
T Consensus 236 l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 236 NEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp HGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEEC
T ss_pred HHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcC
Confidence 6788999999999999986543 566666 777999999999998775
No 224
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.18 E-value=3.2e-06 Score=85.18 Aligned_cols=100 Identities=23% Similarity=0.404 Sum_probs=70.7
Q ss_pred CCeEEEECCcHHHHHHHHHHHhC--CCcEEEEecCCCCccc------cc-----CHHHHHHHHHHH-HHcCcEEEcCCeE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQR------LF-----TPSLAQRYEQLY-QQNGVKFVKGASI 272 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~--g~~vtlv~~~~~~~~~------~~-----~~~~~~~~~~~l-~~~GV~v~~~~~v 272 (488)
.++++|||+|+.|+.+|..|++. +.+|+++++.+.+... .+ ...+.....+.+ ++.|++++.++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 36899999999999999999988 7799999998753211 00 011122222333 6789999999999
Q ss_pred EEEEeCCCCcEEEEEeCCC-cEEEcCEEEEeecCcCCCh
Q 011322 273 KNLEAGSDGRVAAVKLEDG-STIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 273 ~~i~~~~~~~v~~v~~~~g-~~i~~D~vi~a~G~~p~~~ 310 (488)
+.++.. . ..+.+.++ .++.+|.+|+|||.+|...
T Consensus 83 ~~i~~~--~--~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 83 IEVDTG--Y--VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEECSS--E--EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEecC--C--CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 998632 2 24667777 4799999999999988643
No 225
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.18 E-value=1.7e-06 Score=89.99 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=32.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
.+||||||||+||++||..|++.|. +|+||||.+.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~---~V~vlEK~~~ 41 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQ---TCALLSKVFP 41 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---cEEEEecCCC
Confidence 5799999999999999999999987 8999999853
No 226
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.18 E-value=2e-05 Score=81.28 Aligned_cols=99 Identities=14% Similarity=0.181 Sum_probs=75.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc--------cc------------ccC----------------HHH
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL--------QR------------LFT----------------PSL 251 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~--------~~------------~~~----------------~~~ 251 (488)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+- +. .+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 469999999999999999999999999999875421 00 001 235
Q ss_pred HHHHHHHHHHcC--cEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 252 AQRYEQLYQQNG--VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 252 ~~~~~~~l~~~G--V~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
.+++....++.+ ++++++++|++++.+++.....|.+++|+++.+|.||+|+|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 556666666655 6789999999998654433346888899899999999999963
No 227
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.17 E-value=1.6e-06 Score=88.21 Aligned_cols=98 Identities=17% Similarity=0.322 Sum_probs=73.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhHH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (488)
.++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+. ..+ .....+.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~l 234 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGS---KVTVVEFQPQIG---ASMD-----------GEV-----------AKATQKFL 234 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---SSSC-----------HHH-----------HHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC---EEEEEEeCCccc---cccC-----------HHH-----------HHHHHHHH
Confidence 5799999999999999999999986 899999876421 0000 000 11235667
Q ss_pred HHCCcEEEeCCcEEEEeC--CCc--EEEeC-----CCcEEEeccEEecCCCCCCc
Q 011322 131 KEKGIEMIYQDPVTSIDI--EKQ--TLITN-----SGKLLKYGSLIVATGCTASR 176 (488)
Q Consensus 131 ~~~~v~~~~~~~v~~id~--~~~--~v~~~-----~g~~i~yd~lVlAtG~~~~~ 176 (488)
++.|++++.+++|++++. +.. .+++. +++++.+|.||+|+|..|..
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 888999999999999986 443 45554 35679999999999987753
No 228
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.17 E-value=2.2e-06 Score=87.05 Aligned_cols=99 Identities=11% Similarity=0.161 Sum_probs=72.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+|+++.+...-. .+. ..+ .....+.
T Consensus 177 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~~--~~~-----------~~~-----------~~~l~~~ 229 (474)
T 1zmd_A 177 VPEKMVVIGAGVIGVELGSVWQRLGA---DVTAVEFLGHVGGV--GID-----------MEI-----------SKNFQRI 229 (474)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSSCS--SCC-----------HHH-----------HHHHHHH
T ss_pred cCceEEEECCCHHHHHHHHHHHHcCC---EEEEEeccCccCCc--ccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999986 89999987642100 000 000 0123566
Q ss_pred HHHCCcEEEeCCcEEEEeCCC---cEEEe-----CCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK---QTLIT-----NSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~---~~v~~-----~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.+++|.+++.+. ..+++ .+++++++|.||+|+|..|.
T Consensus 230 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 230 LQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp HHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEEC
T ss_pred HHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcC
Confidence 788999999999999998654 23442 45678999999999998765
No 229
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.16 E-value=8.6e-06 Score=77.65 Aligned_cols=99 Identities=14% Similarity=0.167 Sum_probs=74.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC----C----c------------ccccCHHHHHHHHHHHHHcCcEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH----L----L------------QRLFTPSLAQRYEQLYQQNGVKFV 267 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~----~----~------------~~~~~~~~~~~~~~~l~~~GV~v~ 267 (488)
..|+|||+|+.|+.+|..++++|.+|+++++... + . .....+++...+.+.+++.++++.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTII 84 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEE
Confidence 3689999999999999999999999999987531 1 0 001124677778888899999988
Q ss_pred cCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 268 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 268 ~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
... +.......+. ..+.+.++.++.+|.+|+|||.+|..
T Consensus 85 ~~~-v~~~~~~~~~--~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 85 TET-IDHVDFSTQP--FKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp CCC-EEEEECSSSS--EEEEETTCCEEEEEEEEECCCEEECC
T ss_pred EeE-EEEeecCCCc--eEEEECCCeEEEEeEEEEcccccccc
Confidence 764 5555433222 35677888999999999999998764
No 230
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.16 E-value=6e-07 Score=89.30 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=31.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~lie~~~ 87 (488)
.++||+|||||++|+++|+.|+++ |. +|+|||+..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~---~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGR---SLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCC---eEEEEeCCC
Confidence 347999999999999999999999 87 899999974
No 231
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.16 E-value=2e-06 Score=87.06 Aligned_cols=98 Identities=20% Similarity=0.272 Sum_probs=72.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... |.+. ..+ .....+.
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 221 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGV---DVTIVEFLPRAL---PNED-----------ADV-----------SKEIEKQ 221 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCC---eEEEEEcCCccc---cccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999986 899999875420 0000 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeC-CC--cEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN-SG--KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~-~g--~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.+++|.+++.+.. .+.+. +| +++.+|.+|+|+|..|.
T Consensus 222 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 222 FKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp HHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred HHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 7788999999999999986543 44553 56 57999999999998775
No 232
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.15 E-value=4.2e-06 Score=84.72 Aligned_cols=102 Identities=14% Similarity=0.155 Sum_probs=75.6
Q ss_pred eEEEECCcHHHHHHHHHHHhCC-----CcEEEEecCCCCccc--------------------------------------
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWK-----LDTTIIFPENHLLQR-------------------------------------- 245 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g-----~~vtlv~~~~~~~~~-------------------------------------- 245 (488)
+|+|||+|+.|+.+|..|++.| .+|+++++.+.+--.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 6999999999999999999999 899999987632100
Q ss_pred ----------c--cCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCC-CcE--EEEEeCCCc----EEEcCEEEEeecCc
Q 011322 246 ----------L--FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD-GRV--AAVKLEDGS----TIDADTIVIGIGAK 306 (488)
Q Consensus 246 ----------~--~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~-~~v--~~v~~~~g~----~i~~D~vi~a~G~~ 306 (488)
. ...++.+++....++.+++++++++|++++..++ +.. ..|.+.+|+ ++.+|.||+|+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 0 0123445555556667899999999999976421 222 256666665 89999999999998
Q ss_pred CCCh
Q 011322 307 PTVS 310 (488)
Q Consensus 307 p~~~ 310 (488)
|...
T Consensus 192 p~~p 195 (463)
T 3s5w_A 192 PRIP 195 (463)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 7644
No 233
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.15 E-value=4e-06 Score=85.75 Aligned_cols=99 Identities=14% Similarity=0.259 Sum_probs=75.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ .....+.
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d-----------~~~-----------~~~l~~~ 232 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGV---PVTVVASQDHVL---PYED-----------ADA-----------ALVLEES 232 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTC---CEEEECSSSSSS---CCSS-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEcCCccc---cccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999876 899999876421 0000 000 1123566
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--cEEEeCCCcEEEeccEEecCCCCCCc
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASR 176 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~--~~v~~~~g~~i~yd~lVlAtG~~~~~ 176 (488)
+++.|+++++++.|.+++.+. -.+.+.+|+++.+|.+|+|+|..|..
T Consensus 233 l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 233 FAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 788999999999999998765 35666788889999999999988753
No 234
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.15 E-value=1.5e-05 Score=82.61 Aligned_cols=99 Identities=19% Similarity=0.236 Sum_probs=76.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC-Cc-----------------------cc------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR------------------ 245 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~-~~-----------------------~~------------------ 245 (488)
-.|+|||||..|+++|..+++.|.+|.++++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4699999999999999999999999999997631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 246 -----------LFT-PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 246 -----------~~~-~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
..+ ..+...+.+.+++ .|++++ +..++.+..+ ++.+.+|.+.+|.++.||.||+|+|..+.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEES-SSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEec-CCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 001 1345566777777 699995 5689999754 56677888999988999999999998654
No 235
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.15 E-value=3.4e-06 Score=85.99 Aligned_cols=98 Identities=17% Similarity=0.297 Sum_probs=73.2
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++|+|||||+.|+.+|..|++.|. +|+|+++.+... .. .+ ...+ .....+.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l------~~-~~------~~~~-----------~~~l~~~ 245 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGK---EVVLIDVVDTCL------AG-YY------DRDL-----------TDLMAKN 245 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTT------TT-TS------CHHH-----------HHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC---eEEEEEcccchh------hh-HH------HHHH-----------HHHHHHH
Confidence 46899999999999999999999986 899999876421 00 00 0000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.+++|++++.+++ .+.+ +|+++++|.||+|+|..|.
T Consensus 246 l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 246 MEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred HHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 6788999999999999987543 3555 6778999999999998765
No 236
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.14 E-value=1.6e-05 Score=78.19 Aligned_cols=61 Identities=16% Similarity=0.225 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcC
Q 011322 253 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 316 (488)
Q Consensus 253 ~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~g 316 (488)
..+.+.+++.|++++.+++|++++.+ ++.+..|.+.+| ++.+|.||+|+|.... .+++..+
T Consensus 153 ~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~-~l~~~~g 213 (382)
T 1y56_B 153 TAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWAN-LINAMAG 213 (382)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHH-HHHHHHT
T ss_pred HHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHH-HHHHHcC
Confidence 34566677889999999999999865 456656788777 7999999999998753 3444333
No 237
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.14 E-value=4.3e-06 Score=84.39 Aligned_cols=101 Identities=14% Similarity=0.236 Sum_probs=73.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhC--CCcEEEEecCCCCcc--c----ccCH------HHHHHHHHHHHHcCcEEEcCCeEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQ--R----LFTP------SLAQRYEQLYQQNGVKFVKGASIK 273 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~--g~~vtlv~~~~~~~~--~----~~~~------~~~~~~~~~l~~~GV~v~~~~~v~ 273 (488)
++++|||+|+.|+.+|..|++. +.+|+++++.+.+.. . .+.. .+.....+.+++.|++++.+++++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 889999998875431 0 0111 111113466788999999999999
Q ss_pred EEEeCCCCcEEEEE-eCCCcEEEcCEEEEeecCcCCCh
Q 011322 274 NLEAGSDGRVAAVK-LEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 274 ~i~~~~~~~v~~v~-~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
.++.. ...+ .+. ..+++++.+|.+|+|||.+|...
T Consensus 83 ~id~~-~~~v-~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDVE-NQLI-AWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEETT-TTEE-EEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEECC-CCEE-EEEecCceEEEEcCEEEECCCcccCCC
Confidence 99854 3332 232 23566899999999999988643
No 238
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.13 E-value=3e-06 Score=88.50 Aligned_cols=35 Identities=31% Similarity=0.317 Sum_probs=32.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
..+||||||||+||++||..|++.|. +|+|||+.+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~---~V~vlEK~~ 51 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGF---NTACVTKLF 51 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCC---cEEEEeccC
Confidence 35799999999999999999999987 899999975
No 239
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.13 E-value=1.6e-05 Score=82.14 Aligned_cols=99 Identities=17% Similarity=0.251 Sum_probs=76.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC-Cc-----------------------cc------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR------------------ 245 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~-~~-----------------------~~------------------ 245 (488)
-.|+|||||..|+++|..+++.|.+|.++++.+. +. ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999997631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 246 -----------LFT-PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 246 -----------~~~-~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
..+ ..+...+.+.+++ .|++++ +..|+++..+ ++.+.+|.+.+|.++.+|.||+|+|..++
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEES-SSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 001 1245556677777 599995 6789998754 56777899999999999999999998654
No 240
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.13 E-value=1.5e-05 Score=78.73 Aligned_cols=107 Identities=21% Similarity=0.260 Sum_probs=79.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc--------------------c----------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ--------------------R---------------------- 245 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~--------------------~---------------------- 245 (488)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+-. .
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 3699999999999999999999999999998742110 0
Q ss_pred ccC--------------HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe---CCCcEEEcCEEEEeecCcCC
Q 011322 246 LFT--------------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 246 ~~~--------------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~---~~g~~i~~D~vi~a~G~~p~ 308 (488)
.++ ..+...+.+.+++.|++++.+++|++++.+ ++.+.+|.+ .++.++.+|.||.|+|...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s- 162 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES- 162 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC-
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch-
Confidence 000 124456677778889999999999999865 555555666 4566899999999999876
Q ss_pred ChhhHhcCC
Q 011322 309 VSPFERVGL 317 (488)
Q Consensus 309 ~~~~~~~gl 317 (488)
.+.+.+++
T Consensus 163 -~~~~~~g~ 170 (397)
T 3cgv_A 163 -EFGRWAGL 170 (397)
T ss_dssp -HHHHHHTC
T ss_pred -HhHHhcCC
Confidence 33344443
No 241
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.12 E-value=3.2e-06 Score=85.75 Aligned_cols=98 Identities=15% Similarity=0.237 Sum_probs=72.2
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ .....+.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d-----------~~~-----------~~~l~~~ 224 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGA---EVTVVEFAPRCA---PTLD-----------EDV-----------TNALVGA 224 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCC---EEEEEecCCccc---ccCC-----------HHH-----------HHHHHHH
Confidence 45799999999999999999999886 899999875421 0000 000 1123556
Q ss_pred H-HHCCcEEEeCCcEEEEeCCC--cEEEeC--CC--cEEEeccEEecCCCCCC
Q 011322 130 Y-KEKGIEMIYQDPVTSIDIEK--QTLITN--SG--KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~-~~~~v~~~~~~~v~~id~~~--~~v~~~--~g--~~i~yd~lVlAtG~~~~ 175 (488)
+ ++.+++++.+++|.+++.+. ..+.+. +| +++++|.+|+|+|..|.
T Consensus 225 l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 225 LAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp HHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred HhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 7 88999999999999998754 345554 66 57999999999998775
No 242
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.12 E-value=1.7e-05 Score=78.55 Aligned_cols=99 Identities=15% Similarity=0.153 Sum_probs=73.1
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc------ccCHHHH------------------------------
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------LFTPSLA------------------------------ 252 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~------~~~~~~~------------------------------ 252 (488)
+|+|||+|+.|+-+|..|++.|.+|+++++.+.+... .+.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999987543221 0111100
Q ss_pred -----------------------------HHHHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEe
Q 011322 253 -----------------------------QRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIG 302 (488)
Q Consensus 253 -----------------------------~~~~~~l~~-~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a 302 (488)
..+.+.|.+ .+..++++++++.++..+++.+ .+.++||+++.+|+||-|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgA 161 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGA 161 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEEC
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEEC
Confidence 112233322 3456888999999987666655 689999999999999999
Q ss_pred ecCcCC
Q 011322 303 IGAKPT 308 (488)
Q Consensus 303 ~G~~p~ 308 (488)
-|....
T Consensus 162 DG~~S~ 167 (412)
T 4hb9_A 162 DGSNSK 167 (412)
T ss_dssp CCTTCH
T ss_pred CCCCcc
Confidence 998753
No 243
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.11 E-value=1.9e-06 Score=90.87 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=33.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHH-cCCCCCcEEEEcCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSKEAYA 89 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~-~g~~~~~V~lie~~~~~ 89 (488)
.+++|+|||||++|+++|..|++ .|. +|+|||+.+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~---~V~viEr~~~~ 68 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDI---RTCIVEQKEGP 68 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTS---CEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCC---CEEEEeCCCCC
Confidence 35799999999999999999999 887 89999998653
No 244
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.10 E-value=1e-05 Score=76.96 Aligned_cols=99 Identities=15% Similarity=0.203 Sum_probs=73.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEE-EecCCCC------------ccc----ccCHHHHHHHHHHHHHcCcEEEcC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTI-IFPENHL------------LQR----LFTPSLAQRYEQLYQQNGVKFVKG 269 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtl-v~~~~~~------------~~~----~~~~~~~~~~~~~l~~~GV~v~~~ 269 (488)
.++|+|||+|+.|+.+|..|++.|.+|++ +++. .+ .+. ....++..++.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE
Confidence 35799999999999999999999999999 8873 21 011 012467788888888999999998
Q ss_pred CeEEEEEeCCC-CcEEEE-EeCCCcEEEcCEEEEeecCcCCCh
Q 011322 270 ASIKNLEAGSD-GRVAAV-KLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 270 ~~v~~i~~~~~-~~v~~v-~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
++.++ .+++ +.. .+ ...++ ++.+|.+|+|+|.+|...
T Consensus 83 -~v~~i-~~~~~~~~-~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 83 -GVEQI-LKNSDGSF-TIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp -CEEEE-EECTTSCE-EEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred -EEEEE-ecCCCCcE-EEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 78888 4331 222 32 22334 899999999999987643
No 245
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.10 E-value=3.1e-06 Score=87.56 Aligned_cols=36 Identities=17% Similarity=0.257 Sum_probs=32.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
+++|+|||||++|+++|..|++.|. +|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~---~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQV---GHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 4799999999999999999999987 79999998653
No 246
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.10 E-value=1.6e-05 Score=80.11 Aligned_cols=100 Identities=20% Similarity=0.210 Sum_probs=77.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc------c------------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------R------------------------------------ 245 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~------~------------------------------------ 245 (488)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4699999999999999999999999999998753210 0
Q ss_pred ---------ccC-HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeC---CCc--EEEcCEEEEeecCcCC
Q 011322 246 ---------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTIVIGIGAKPT 308 (488)
Q Consensus 246 ---------~~~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~---~g~--~i~~D~vi~a~G~~p~ 308 (488)
.++ ..+.+.+.+.+++.|++++.+++|+++..+ ++.+.+|++. +|+ ++.+|.||.|+|..+.
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 000 235566777777889999999999999864 4555555554 676 7999999999998765
No 247
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.10 E-value=6.8e-06 Score=83.37 Aligned_cols=101 Identities=21% Similarity=0.297 Sum_probs=64.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhC--CCcEEEEecCCCCc------ccccC------HHH-------HHHHHHHHHHcCcEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL------QRLFT------PSL-------AQRYEQLYQQNGVKF 266 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~--g~~vtlv~~~~~~~------~~~~~------~~~-------~~~~~~~l~~~GV~v 266 (488)
++|+|||+|+.|+.+|..|++. +.+|+++++.+.+. +..+. ..+ ........++.|+++
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 83 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVEA 83 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcEE
Confidence 6899999999999999999998 89999999987631 11111 111 122222233579999
Q ss_pred EcCCeEEEEEeCCCCcEEEEE-eCCCc--EEEcCEEEEeecCcCCCh
Q 011322 267 VKGASIKNLEAGSDGRVAAVK-LEDGS--TIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 267 ~~~~~v~~i~~~~~~~v~~v~-~~~g~--~i~~D~vi~a~G~~p~~~ 310 (488)
+.++++++++.. ...+ .+. +.+|+ ++.+|.+|+|||.+|...
T Consensus 84 ~~~~~V~~id~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 84 LVETRAHAIDRA-AHTV-EIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp ECSEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EECCEEEEEECC-CCEE-EEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999999853 3333 233 23465 799999999999987643
No 248
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.10 E-value=4.1e-06 Score=84.50 Aligned_cols=99 Identities=15% Similarity=0.297 Sum_probs=72.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+++++.+... + . .+ ...+ .....+.
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~---~-~~------~~~~-----------~~~l~~~ 200 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNY---NVNLIDGHERVL---Y---K-YF------DKEF-----------TDILAKD 200 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSTT---T---T-TS------CHHH-----------HHHHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCC---EEEEEEcCCchh---h---h-hh------hhhH-----------HHHHHHH
Confidence 35799999999999999999999876 899999875421 0 0 00 0000 0123556
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEE--EeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQTL--ITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~~v--~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++++++|.+++.++..+ ...+|+++.+|.+|+|+|..|.
T Consensus 201 l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 201 YEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 788999999999999998633322 2347788999999999998775
No 249
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.09 E-value=5.9e-06 Score=84.10 Aligned_cols=98 Identities=20% Similarity=0.343 Sum_probs=75.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||+|+.|+..|..|++.|. +|+++++.+... +.+. ..+ .....+.
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtli~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 241 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGV---KTTLLHRGDLIL---RNFD-----------YDL-----------RQLLNDA 241 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCC---eEEEEECCCccc---cccC-----------HHH-----------HHHHHHH
Confidence 36799999999999999999999876 899999876421 0000 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.++.|.+++.+.. .+++.+|+++.+|.||+|+|..|.
T Consensus 242 l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 242 MVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 6778999999999999987543 678888988999999999998765
No 250
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.09 E-value=3.1e-05 Score=80.50 Aligned_cols=111 Identities=19% Similarity=0.296 Sum_probs=83.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhC------CCcEEEEecCCCCccc------------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGW------KLDTTIIFPENHLLQR------------------------------------ 245 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~------g~~vtlv~~~~~~~~~------------------------------------ 245 (488)
-.|+|||+|+.|+-+|..|++. |.+|+++++.+.+-..
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4699999999999999999998 9999999986432100
Q ss_pred --------cc---C--------------HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeC------CC---
Q 011322 246 --------LF---T--------------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE------DG--- 291 (488)
Q Consensus 246 --------~~---~--------------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~------~g--- 291 (488)
.+ + ..+.+.+.+.+++.||++++++.++++..++++.+.+|.+. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 00 0 13456677777888999999999999987666777667776 33
Q ss_pred ------cEEEcCEEEEeecCcCCC--hhhHhcCCc
Q 011322 292 ------STIDADTIVIGIGAKPTV--SPFERVGLN 318 (488)
Q Consensus 292 ------~~i~~D~vi~a~G~~p~~--~~~~~~gl~ 318 (488)
.++.+|+||.|.|..... .+++..++.
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~ 230 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLR 230 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTT
T ss_pred cccCCceEEECCEEEEeeCCCchHHHHHHHHhCCC
Confidence 679999999999998743 233444443
No 251
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.09 E-value=5e-06 Score=85.31 Aligned_cols=45 Identities=11% Similarity=0.139 Sum_probs=35.7
Q ss_pred HHHCCcEEEeCCcEEEEeCC--C--cEEEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIE--K--QTLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~--~--~~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+.+.|++++.+ +|+++..+ . ..|++.+|+++.+|.||.|+|....
T Consensus 183 a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 183 AIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 34569999998 99999763 2 2467788888999999999998654
No 252
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=2.6e-06 Score=86.39 Aligned_cols=98 Identities=16% Similarity=0.318 Sum_probs=73.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+. ..+ .....+.
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtli~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 227 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGS---EVTVVEFASEIV---PTMD-----------AEI-----------RKQFQRS 227 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEEcCCccc---cccc-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999986 899999876421 0000 000 0123556
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeC---CC--cEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN---SG--KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~---~g--~~i~yd~lVlAtG~~~~ 175 (488)
+++.+++++.+++|.+++.+.. .+++. +| +++++|.+|+|+|..|.
T Consensus 228 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 228 LEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp HHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred HHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 7888999999999999987653 44543 44 67999999999998775
No 253
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.07 E-value=6.9e-06 Score=85.03 Aligned_cols=36 Identities=17% Similarity=0.326 Sum_probs=33.2
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+..+||+|||||++|+++|..|+++|. +|+|+|+++
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~~G~---~V~LlEk~d 51 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQVRGI---QTGLVEMND 51 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---cEEEEECCC
Confidence 456899999999999999999999988 899999985
No 254
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.07 E-value=4.4e-06 Score=87.87 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=32.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
..+||||||||.||++||.+|++.|. +|+|||+.+.
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~---~V~vlEK~~~ 39 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGL---STIVLSLIPV 39 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCC---cEEEEeccCC
Confidence 35799999999999999999999987 8999999763
No 255
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.07 E-value=3.6e-06 Score=91.52 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=32.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
+++||+|||||++|+++|++|+++|. .+|+|||++..
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~--~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGW--NNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC--CCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCC--CcEEEEeCCCC
Confidence 46899999999999999999999985 26999999864
No 256
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.06 E-value=4.9e-06 Score=86.50 Aligned_cols=98 Identities=15% Similarity=0.286 Sum_probs=73.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... +.... .+ .....+.
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 201 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLGI---KTTLLELADQVM---TPVDR-----------EM-----------AGFAHQA 201 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSC---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC---cEEEEEcCCccc---hhcCH-----------HH-----------HHHHHHH
Confidence 35699999999999999999999986 899999875420 00000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeC-------------------CCc--EEEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDI-------------------EKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~-------------------~~~--~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.+++++.++.|.+++. ... .+++.+|+++.+|.+|+|+|..|.
T Consensus 202 l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 202 IRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp HHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 7789999999999999876 222 566788889999999999998765
No 257
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.06 E-value=4e-06 Score=85.27 Aligned_cols=97 Identities=18% Similarity=0.267 Sum_probs=72.2
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+ ...+ .....+.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~-----------~~~~-----------~~~l~~~ 236 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGK---KVRMIERNDHIG---TIY-----------DGDM-----------AEYIYKE 236 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTC---EEEEECCGGGTT---SSS-----------CHHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCC---eEEEEEeCCchh---hcC-----------CHHH-----------HHHHHHH
Confidence 46899999999999999999999986 899999875421 000 0000 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcE--EEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQT--LITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~~--v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.++.|.+++.+++. +.++ +.++++|.||+|+|..|.
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 237 ADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECSEEEECSCEEES
T ss_pred HHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcCEEEECcCCCcC
Confidence 77889999999999999876542 4454 457999999999998765
No 258
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.05 E-value=3.6e-05 Score=73.34 Aligned_cols=98 Identities=19% Similarity=0.230 Sum_probs=73.4
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC---Cc--------c---cccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---LL--------Q---RLFTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~---~~--------~---~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~ 274 (488)
.|+|||+|+.|+.+|..|+++|.+|+++++... ++ + ....+++.........+.+..+..+.....
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 589999999999999999999999999987521 11 0 011245666777777888888888876666
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCCh
Q 011322 275 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 275 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
.... .. .+...+++++.+|.+|+|||.+|...
T Consensus 88 ~~~~-~~---~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 88 EDKG-EY---KVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EECS-SC---EEEECSSCEEEEEEEEECCCEEECCC
T ss_pred eeee-cc---eeeccCCeEEEeceeEEcccCccCcC
Confidence 5532 22 34567788999999999999988643
No 259
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.05 E-value=6.2e-06 Score=86.66 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=31.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHc------CCCCCcEEEEcCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEH------GMADGRLCIVSKEAY 88 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~------g~~~~~V~lie~~~~ 88 (488)
++||||||||+||++||.+|++. |. +|+||||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~---~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEA---KILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTC---CEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCC---cEEEEEecCC
Confidence 57999999999999999999997 76 8999999753
No 260
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.05 E-value=2.7e-05 Score=80.96 Aligned_cols=108 Identities=16% Similarity=0.233 Sum_probs=81.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc-----------------------------------------
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 245 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~----------------------------------------- 245 (488)
..+|+|||||+.|+-+|..|++.|.+|+++++.+..-..
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 468999999999999999999999999999987211000
Q ss_pred ---------------------ccC-HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeC-CC--cEEEcCEEE
Q 011322 246 ---------------------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTIV 300 (488)
Q Consensus 246 ---------------------~~~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~-~g--~~i~~D~vi 300 (488)
.++ ..+...+.+.+++.|++++.+++|+++... ++.+..|.+. +| .++.+|.||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEE
Confidence 011 245566777788899999999999999854 3444567776 67 579999999
Q ss_pred EeecCcCCChhhHhcCC
Q 011322 301 IGIGAKPTVSPFERVGL 317 (488)
Q Consensus 301 ~a~G~~p~~~~~~~~gl 317 (488)
.|+|... .+.+.+++
T Consensus 182 ~AdG~~S--~lr~~lg~ 196 (591)
T 3i3l_A 182 DAGGSGG--PISRKLGV 196 (591)
T ss_dssp ECCGGGC--HHHHHHTC
T ss_pred ECCCCcc--hhHHHcCC
Confidence 9999865 23344443
No 261
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.04 E-value=2.3e-05 Score=81.17 Aligned_cols=101 Identities=18% Similarity=0.303 Sum_probs=76.3
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC-Cc-----------------------cc----------------
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR---------------- 245 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~-~~-----------------------~~---------------- 245 (488)
..-.|+|||||..|+++|..+++.|.+|+++++.+. +. ..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 345799999999999999999999999999997631 10 00
Q ss_pred -------------ccCH-HHHHHHHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 246 -------------LFTP-SLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 246 -------------~~~~-~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
..+. .+...+.+.+++ .|++++.+ .++.+..+ ++.+.+|.+.+|+++.||.||+|+|..++
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 0111 345566677777 49999654 78888753 56676788899999999999999997754
No 262
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.04 E-value=3.4e-05 Score=79.07 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=76.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC--------ccc----------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL--------LQR---------------------------------- 245 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~--------~~~---------------------------------- 245 (488)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.. .+.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 47999999999999999999999999999987410 000
Q ss_pred -------------------ccC-HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEE--eCCCc--EEEcCEEEE
Q 011322 246 -------------------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK--LEDGS--TIDADTIVI 301 (488)
Q Consensus 246 -------------------~~~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~--~~~g~--~i~~D~vi~ 301 (488)
.++ ..+.+.+.+.+++.|++++.+++|+++... ++.+..|. ..+|+ ++.+|+||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 000 234556777778899999999999999864 45554444 45674 799999999
Q ss_pred eecCcCC
Q 011322 302 GIGAKPT 308 (488)
Q Consensus 302 a~G~~p~ 308 (488)
|+|....
T Consensus 167 AdG~~S~ 173 (512)
T 3e1t_A 167 ASGNRTR 173 (512)
T ss_dssp CCCTTCS
T ss_pred CCCcchH
Confidence 9998754
No 263
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.03 E-value=6e-06 Score=84.19 Aligned_cols=97 Identities=14% Similarity=0.173 Sum_probs=70.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... +.... .+ .....+.
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 224 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGV---IVKVFGRSGSVA---NLQDE-----------EM-----------KRYAEKT 224 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTC---EEEEECCTTCCT---TCCCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEECCccc---ccCCH-----------HH-----------HHHHHHH
Confidence 46899999999999999999999986 899999876521 10000 00 0122344
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeC--CC--cEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN--SG--KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~--~g--~~i~yd~lVlAtG~~~~ 175 (488)
+++. ++++.++.|..+..++. .+++. +| +++.+|.||+|+|..|.
T Consensus 225 l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 225 FNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp HHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred HhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 5555 99999999999976543 45553 67 67999999999998775
No 264
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.03 E-value=2.7e-05 Score=75.28 Aligned_cols=95 Identities=18% Similarity=0.185 Sum_probs=69.5
Q ss_pred eEEEECCcHHHHHHHHHHHh---CCCcEEEEecCCCCcccc----------------------cCH---HH---------
Q 011322 209 KVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------------------FTP---SL--------- 251 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~---~g~~vtlv~~~~~~~~~~----------------------~~~---~~--------- 251 (488)
+|+|||+|..|+-+|..|++ .|.+|+++++.+.+-.+. .++ .+
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 69999999999999999999 899999999774321100 000 11
Q ss_pred -----------------------------HHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEe
Q 011322 252 -----------------------------AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIG 302 (488)
Q Consensus 252 -----------------------------~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a 302 (488)
...++...++.|++++++++|++++..+++ + .|.+.+|+++.+|.||+|
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vV~A 160 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK-W-EVSKQTGSPEQFDLIVLT 160 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS-E-EEEESSSCCEEESEEEEC
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEEC
Confidence 112223334448999999999999875443 3 578888888999999999
Q ss_pred ecC
Q 011322 303 IGA 305 (488)
Q Consensus 303 ~G~ 305 (488)
+..
T Consensus 161 ~p~ 163 (342)
T 3qj4_A 161 MPV 163 (342)
T ss_dssp SCH
T ss_pred CCH
Confidence 874
No 265
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.02 E-value=6.8e-06 Score=83.27 Aligned_cols=96 Identities=18% Similarity=0.269 Sum_probs=72.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+++++.+... | ... .+ .....+.
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~-~~~-----------~~-----------~~~l~~~ 225 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGS---KVTVLARNTLFF---R-EDP-----------AI-----------GEAVTAA 225 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCTTT---T-SCH-----------HH-----------HHHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEEECCccC---C-CCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999875420 0 000 00 1224566
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.+++|.+++.++. .+.++ +.++++|.+|+|+|..|.
T Consensus 226 l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 226 FRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEES
T ss_pred HHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcC
Confidence 7889999999999999986554 35555 557999999999998765
No 266
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.02 E-value=4e-05 Score=74.91 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcC
Q 011322 251 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 307 (488)
Q Consensus 251 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 307 (488)
+...+.+.+++.|++++.+++|++++.+++ .+ .+.+.+|+ +.+|.||+|+|...
T Consensus 151 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~-~~-~v~~~~g~-~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 151 AIKTWIQLAKEAGCAQLFNCPVTAIRHDDD-GV-TIETADGE-YQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSS-SE-EEEESSCE-EEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEcCC-EE-EEEECCCe-EEcCEEEEcCCccH
Confidence 344556667788999999999999986543 33 57777775 99999999999764
No 267
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.00 E-value=1e-05 Score=77.02 Aligned_cols=37 Identities=22% Similarity=0.469 Sum_probs=32.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 89 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~lie~~~~~ 89 (488)
..+||+|||||++|+++|..|++. |. +|+|+|+.+..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~---~V~v~e~~~~~ 102 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDL---KVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCC---eEEEEecCccc
Confidence 346999999999999999999998 65 89999998754
No 268
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.99 E-value=3.8e-05 Score=79.17 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=76.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc--------------------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------------- 243 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~-------------------------------------------- 243 (488)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+.
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999999874220
Q ss_pred -------c----c-----------------cc-CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCC---cEEEEEeCCC
Q 011322 244 -------Q----R-----------------LF-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG---RVAAVKLEDG 291 (488)
Q Consensus 244 -------~----~-----------------~~-~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~---~v~~v~~~~g 291 (488)
. . .+ ...+...+.+.+++.|+++++++++++++.++++ .+ .+.+.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v-~v~~~~~ 164 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGV-TARLAGP 164 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEE-EEEEEET
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccE-EEEEEcC
Confidence 0 0 00 1235566777788889999999999999876442 33 4666665
Q ss_pred ---cEEEcCEEEEeecCcC
Q 011322 292 ---STIDADTIVIGIGAKP 307 (488)
Q Consensus 292 ---~~i~~D~vi~a~G~~p 307 (488)
.++.||+||.|.|...
T Consensus 165 ~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 165 DGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp TEEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCCcc
Confidence 6799999999999875
No 269
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.99 E-value=8.7e-06 Score=82.36 Aligned_cols=97 Identities=19% Similarity=0.300 Sum_probs=74.2
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||+|+.|+..|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vt~v~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 220 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGV---KTTLIYRGKEIL---SRFDQ-----------DM-----------RRGLHAA 220 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 46799999999999999999999876 899999876421 00000 00 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC-c--EEE-eCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK-Q--TLI-TNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~-~--~v~-~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.++.|.+++.+. . .|+ +.+|+ +.+|.+|+|+|..|.
T Consensus 221 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 221 MEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp HHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred HHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 788999999999999998753 2 677 78888 999999999998765
No 270
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.99 E-value=8.7e-06 Score=82.68 Aligned_cols=98 Identities=15% Similarity=0.282 Sum_probs=73.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||+|+.|+.+|..|++.|. +|+++++.+... +.+. ..+ .....+.
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 230 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGA---EVTVLEAMDKFL---PAVD-----------EQV-----------AKEAQKI 230 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEecCCCcC---cccC-----------HHH-----------HHHHHHH
Confidence 45799999999999999999999886 899999876421 0000 000 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCC---cEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSG---KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~~g---~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.++.|.+++.+.. .+++.++ +++.+|.+|+|+|..|.
T Consensus 231 l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 231 LTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp HHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEEC
T ss_pred HHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCccc
Confidence 7788999999999999986543 4556554 57999999999998765
No 271
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.99 E-value=3.1e-05 Score=76.81 Aligned_cols=100 Identities=20% Similarity=0.296 Sum_probs=74.6
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc----------------------------------------
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR---------------------------------------- 245 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~---------------------------------------- 245 (488)
...+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3468999999999999999999999999999987532100
Q ss_pred -----cc-----------------CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEee
Q 011322 246 -----LF-----------------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGI 303 (488)
Q Consensus 246 -----~~-----------------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~ 303 (488)
.+ ...+.+.+.+.+++ ++++++++|++++..++ .+ .+.+.+|+++.+|+||.|.
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v-~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD-GV-TVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT-EE-EEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC-cE-EEEEcCCCEEeeCEEEECC
Confidence 00 01233444444444 88999999999986543 33 5888999999999999999
Q ss_pred cCcCCC
Q 011322 304 GAKPTV 309 (488)
Q Consensus 304 G~~p~~ 309 (488)
|.....
T Consensus 178 G~~S~v 183 (407)
T 3rp8_A 178 GSHSAL 183 (407)
T ss_dssp CTTCSS
T ss_pred CcChHH
Confidence 987654
No 272
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.97 E-value=5.6e-06 Score=83.37 Aligned_cols=90 Identities=14% Similarity=0.194 Sum_probs=70.1
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC-------ccc-ccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEe
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-------LQR-LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 277 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~-------~~~-~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 277 (488)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ ++. .++.++.....+.+++.||++++++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec----
Confidence 3578999999999999999999999999999998764 121 1355677777888999999999997652
Q ss_pred CCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 278 GSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 278 ~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
. .+.++++ .+.+|.||+|+|..
T Consensus 197 ---~---~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 ---R---DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp ---T---TBCHHHH-HSSCSEEEECCCCC
T ss_pred ---c---EEEhhHh-HhhCCEEEEecCCC
Confidence 0 1233333 26799999999986
No 273
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.96 E-value=2.5e-05 Score=77.32 Aligned_cols=100 Identities=18% Similarity=0.304 Sum_probs=71.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc----cc---CHH---H-------------------------
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----LF---TPS---L------------------------- 251 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~----~~---~~~---~------------------------- 251 (488)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+..+ .+ ... +
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 468999999999999999999999999999987643211 00 000 0
Q ss_pred ---------------------HHHHHHHHHHc--CcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 252 ---------------------AQRYEQLYQQN--GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 252 ---------------------~~~~~~~l~~~--GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
...+.+.|.+. +++++++++|++++.+++ .+ .|++.+|+++.+|+||.|.|....
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v-~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKK-KW-TLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSS-SE-EEEETTSCCEEESEEEECSCTTCS
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCC-EE-EEEECCCcEEecCEEEECCCcchh
Confidence 01122222221 357889999999986543 33 588899989999999999998765
No 274
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.96 E-value=8.3e-06 Score=83.17 Aligned_cols=98 Identities=17% Similarity=0.248 Sum_probs=72.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... +... ..+ .....+.
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d-----------~~~-----------~~~l~~~ 248 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGA---KVTVVEFLDTIL---GGMD-----------GEV-----------AKQLQRM 248 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---SSSC-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---EEEEEecccccc---ccCC-----------HHH-----------HHHHHHH
Confidence 45799999999999999999999986 899999776421 0000 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCC---C--cEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNS---G--KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~~---g--~~i~yd~lVlAtG~~~~ 175 (488)
+++.+++++.+++|.++..+.. .+.+.+ | +++++|.||+|+|..|.
T Consensus 249 l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 249 LTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp HHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred HHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 7788999999989999876543 344442 4 57999999999998765
No 275
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.96 E-value=3.2e-05 Score=80.11 Aligned_cols=107 Identities=17% Similarity=0.218 Sum_probs=79.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc-------------------------------------ccc----
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------QRL---- 246 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~-------------------------------------~~~---- 246 (488)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+. ...
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 469999999999999999999999999999763211 000
Q ss_pred ---------------c-CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe--CCC-cEEEcCEEEEeecCcC
Q 011322 247 ---------------F-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL--EDG-STIDADTIVIGIGAKP 307 (488)
Q Consensus 247 ---------------~-~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~--~~g-~~i~~D~vi~a~G~~p 307 (488)
+ ...+...+.+.+++.|++++++++|++++.++++ + .|++ .+| +++.+|+||.|.|...
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-v-~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-V-EVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-E-EEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-E-EEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 0 1235666777778889999999999999865444 3 3555 788 6899999999999875
Q ss_pred CChhhHhcCCc
Q 011322 308 TVSPFERVGLN 318 (488)
Q Consensus 308 ~~~~~~~~gl~ 318 (488)
..-+.+|+.
T Consensus 208 --~vR~~lGi~ 216 (570)
T 3fmw_A 208 --TVRRLAADR 216 (570)
T ss_dssp --HHHHHTTCC
T ss_pred --hHHHHcCCC
Confidence 333444443
No 276
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.95 E-value=1.1e-05 Score=82.32 Aligned_cols=101 Identities=18% Similarity=0.258 Sum_probs=72.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCC-CCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMA-DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
.++|+|||||+.|+.+|..|++.+.. ..+|+++++.+.. ..+ .+ + ..+ .....+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~-~~~------~l-~-----~~~-----------~~~~~~~ 235 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN-MGK------IL-P-----EYL-----------SNWTMEK 235 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST-TTT------TS-C-----HHH-----------HHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc-ccc------cC-C-----HHH-----------HHHHHHH
Confidence 57999999999999999999874210 2379999876431 000 00 0 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCc--EEEeCCCcEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~--~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
+++.|++++.++.|++++.++. .+++.+|+++++|.+|+|+|..|.
T Consensus 236 l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 236 VRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 6788999999999999975443 577889999999999999998765
No 277
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.94 E-value=7e-05 Score=71.19 Aligned_cols=101 Identities=21% Similarity=0.232 Sum_probs=73.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhC--CCcEEEEecCCCCcccc-------------------------------------cC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQRL-------------------------------------FT 248 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~--g~~vtlv~~~~~~~~~~-------------------------------------~~ 248 (488)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.+-... ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 3799999999999999999998 99999999865432100 01
Q ss_pred HHHHHHHHHHHHH-cCcEEEcCCeEEEEEeCC--C-C--cEEEEEeC--------------CCcEEEc------------
Q 011322 249 PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGS--D-G--RVAAVKLE--------------DGSTIDA------------ 296 (488)
Q Consensus 249 ~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~--~-~--~v~~v~~~--------------~g~~i~~------------ 296 (488)
..+...+.+.+.+ .||+++.++.++++..++ + + ++.+|.+. ++.++.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 2334455565666 499999999999997653 3 4 77777652 3457999
Q ss_pred ---CEEEEeecCcCC
Q 011322 297 ---DTIVIGIGAKPT 308 (488)
Q Consensus 297 ---D~vi~a~G~~p~ 308 (488)
|.||.|||....
T Consensus 226 ~~~~~VV~ATG~~~~ 240 (326)
T 2gjc_A 226 QKHGVILSTTGHDGP 240 (326)
T ss_dssp TTCCEEEECCCCC--
T ss_pred ccCCEEEECcCCCch
Confidence 999999998754
No 278
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.93 E-value=9.2e-06 Score=82.65 Aligned_cols=97 Identities=13% Similarity=0.163 Sum_probs=70.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+++++....+ .+. ..+ .....+.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~l~----~~d-----------~~~-----------~~~l~~~ 236 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGY---EPTVMVRSIVLR----GFD-----------QQM-----------AELVAAS 236 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSCSST----TSC-----------HHH-----------HHHHHHH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCC---EEEEEeCCCCCc----ccC-----------HHH-----------HHHHHHH
Confidence 35789999999999999999999876 899998642211 000 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC---cEEEeCCCc-----EEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK---QTLITNSGK-----LLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~---~~v~~~~g~-----~i~yd~lVlAtG~~~~ 175 (488)
+++.+++++.++.|.++.... ..+++.++. ++.+|.+|+|+|..|.
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 237 MEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp HHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 788899999999999987632 246665543 7999999999998765
No 279
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.92 E-value=0.00012 Score=75.37 Aligned_cols=56 Identities=16% Similarity=0.290 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCC
Q 011322 253 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 253 ~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 309 (488)
..+.+.+++.|++++.+ +|++++.++++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 44555666789999999 899998765666667888999889999999999997653
No 280
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.92 E-value=9.4e-06 Score=82.49 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=71.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.... .+ .....+.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~~~~~ 237 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGS---KTSLMIRHDKVL---RSFDS-----------MI-----------STNCTEE 237 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCC---eEEEEEeCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999986 899999875421 00000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC-c---EEEeCC---C----cEEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK-Q---TLITNS---G----KLLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~-~---~v~~~~---g----~~i~yd~lVlAtG~~~~ 175 (488)
+++.+++++.++.|.+++... . .+.+.+ + +++.+|.+|+|+|..|.
T Consensus 238 l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 238 LENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp HHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 788899999998999987542 2 455554 2 57999999999998765
No 281
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.87 E-value=1.7e-05 Score=80.72 Aligned_cols=97 Identities=12% Similarity=0.151 Sum_probs=69.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+++++....+ .+. ..+ .....+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~l~----~~d-----------~~~-----------~~~l~~~ 234 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGL---DTTVMMRSIPLR----GFD-----------QQM-----------SSLVTEH 234 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSST----TSC-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEEcCcccc----cCC-----------HHH-----------HHHHHHH
Confidence 45689999999999999999999986 899998753211 000 000 1123556
Q ss_pred HHHCCcEEEeCCcEEEEeCC-C--cEEEeCC---Cc--EEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIE-K--QTLITNS---GK--LLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~-~--~~v~~~~---g~--~i~yd~lVlAtG~~~~ 175 (488)
+++.+++++.++.+.++... . ..+++.+ |+ ++.+|.+++|+|..|.
T Consensus 235 l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 235 MESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp HHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 78889999999888888652 2 2455543 54 4789999999998765
No 282
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.87 E-value=0.00011 Score=75.20 Aligned_cols=58 Identities=19% Similarity=0.321 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC-Cc--EEEcC-EEEEeecCcC
Q 011322 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED-GS--TIDAD-TIVIGIGAKP 307 (488)
Q Consensus 250 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~-g~--~i~~D-~vi~a~G~~p 307 (488)
.+...+.+.+++.|+++++++.++++..++++++.+|...+ ++ ++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 45556667778889999999999999876567887777654 32 58996 9999999754
No 283
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.85 E-value=2.9e-05 Score=78.56 Aligned_cols=98 Identities=23% Similarity=0.291 Sum_probs=71.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccc------------------------------cCH-H------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------------------FTP-S------ 250 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~------------------------------~~~-~------ 250 (488)
..++|||+|+.|+.+|..|++.|.+|+++++.+.+-... ++. .
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 369999999999999999999999999999776542110 000 0
Q ss_pred ----HH--HHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcE--EEcCEEEEeecCcCCCh
Q 011322 251 ----LA--QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST--IDADTIVIGIGAKPTVS 310 (488)
Q Consensus 251 ----~~--~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~--i~~D~vi~a~G~~p~~~ 310 (488)
+. ..+...+++.||+++.+ ++..++. .. ..|.+.+|++ +.+|.+|+|||.+|...
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~---~~-~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYKG-YVKIKDP---TH-VIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESE-EEEEEET---TE-EEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred hheeccccchHHHHHHhCCCEEEEe-EEEEecC---Ce-EEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 01 33444556679999888 5666652 22 3577788888 99999999999988643
No 284
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.84 E-value=0.00018 Score=73.39 Aligned_cols=100 Identities=18% Similarity=0.266 Sum_probs=77.3
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc----------------------c-----------------
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------L----------------- 246 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~----------------------~----------------- 246 (488)
...+|+|||+|+.|+-+|..|++.|.+|+++++.+.+... .
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 3457999999999999999999999999999976322100 0
Q ss_pred -------------c-CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc---EEEcCEEEEeecCcC
Q 011322 247 -------------F-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDADTIVIGIGAKP 307 (488)
Q Consensus 247 -------------~-~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~---~i~~D~vi~a~G~~p 307 (488)
+ ...+.+.+.+.+++.|+++++++++++++.++++ + .+++.+++ ++.+|+||.|.|...
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEcCCCcEEEEeCEEEEccCccc
Confidence 0 0235566777778889999999999999876443 4 46777764 799999999999875
No 285
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.84 E-value=0.00011 Score=70.16 Aligned_cols=139 Identities=20% Similarity=0.237 Sum_probs=90.3
Q ss_pred CCeEEEECCcHHHHHHHHHHHhC--CCcEEEEecCCCCccc------------------------------------c-c
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQR------------------------------------L-F 247 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~--g~~vtlv~~~~~~~~~------------------------------------~-~ 247 (488)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+-.. . .
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 35799999999999999999997 9999999987533200 0 0
Q ss_pred CHHHHHHHHHHHHH-cCcEEEcCCeEEEEEeCCC----------------C--cEEEEEeC--------------CCcEE
Q 011322 248 TPSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSD----------------G--RVAAVKLE--------------DGSTI 294 (488)
Q Consensus 248 ~~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~----------------~--~v~~v~~~--------------~g~~i 294 (488)
..++.+.+.+.+.+ .|++++.++.++++..+++ + ++.+|... +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 12334555566666 5999999999998865432 2 56666542 23479
Q ss_pred EcCEEEEeecCcCCC-h----hhHhcCCccc-CCCEEeC---------CCCCCCCCCEEEEceecc
Q 011322 295 DADTIVIGIGAKPTV-S----PFERVGLNSS-VGGIQVD---------GQFRTRMPGIFAIGDVAA 345 (488)
Q Consensus 295 ~~D~vi~a~G~~p~~-~----~~~~~gl~~~-~g~i~vd---------~~~~t~~~~Iya~GD~a~ 345 (488)
.+++||.|||..... . -+...++... .|.-..| ++-+--+|++|++|=.+.
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~ 304 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELS 304 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHH
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhH
Confidence 999999999987652 1 1334454311 1111111 011113799999997664
No 286
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.84 E-value=6.9e-05 Score=80.13 Aligned_cols=38 Identities=24% Similarity=0.453 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
+..++|+|||||++|+++|..|++.|+ +|+|+|+.+..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~ 371 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGI---KVTVLEAKDRI 371 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEecccce
Confidence 446899999999999999999999987 89999997643
No 287
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.84 E-value=1.4e-05 Score=81.45 Aligned_cols=101 Identities=17% Similarity=0.316 Sum_probs=68.7
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc---------ccCH-HHHHHHHHHH--HHcCcEEEcCCeEEE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR---------LFTP-SLAQRYEQLY--QQNGVKFVKGASIKN 274 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~---------~~~~-~~~~~~~~~l--~~~GV~v~~~~~v~~ 274 (488)
.++|||||+|+.|+.+|..|.+.+.+||+|++.+...-. .+++ .+...+.+.+ ++.+++++.+ ++++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~ 120 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATS 120 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEE
Confidence 358999999999999999999989999999998753211 1111 1111122222 3457888876 6888
Q ss_pred EEeCCCCcEEEEE------------------eCCCcEEEcCEEEEeecCcCCCh
Q 011322 275 LEAGSDGRVAAVK------------------LEDGSTIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 275 i~~~~~~~v~~v~------------------~~~g~~i~~D~vi~a~G~~p~~~ 310 (488)
|+.+ ...+ .+. ..++.++++|.+|+|||.+|+..
T Consensus 121 ID~~-~k~V-~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 121 INPD-RNTV-TIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EEGG-GTEE-EEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred EEhh-hCEE-EEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 8753 2322 221 13567899999999999998753
No 288
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.84 E-value=8.8e-06 Score=83.38 Aligned_cols=52 Identities=17% Similarity=0.311 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecC
Q 011322 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 305 (488)
Q Consensus 250 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~ 305 (488)
.+.+.+.+.+++.|+++++++.|++|..+ ++ .+++.+|+++.||.||+++..
T Consensus 223 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~---~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 223 GIWIAVANTLPKEKTRFGEKGKVTKVNAN-NK---TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHTSCGGGEEESGGGCEEEEETT-TT---EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHhcCeeeecceEEEEEEcc-CC---EEEEcCCCEEECCEEEECCCH
Confidence 45666777778889999999999999853 33 467899999999999998664
No 289
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.82 E-value=1.1e-05 Score=85.36 Aligned_cols=35 Identities=31% Similarity=0.459 Sum_probs=32.2
Q ss_pred CCeEEEEcCchHHHHHHHHHHH-----cCCCCCcEEEEcCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVE-----HGMADGRLCIVSKEAY 88 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~-----~g~~~~~V~lie~~~~ 88 (488)
+++|+|||||++|+++|..|++ .|+ +|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi---~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL---KVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC---CEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC---CEEEEeCCCC
Confidence 5799999999999999999999 888 8999999764
No 290
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.82 E-value=8.8e-05 Score=73.62 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=72.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCc-EEEEecCCCCccc----cc-----------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLD-TTIIFPENHLLQR----LF----------------------------------- 247 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~-vtlv~~~~~~~~~----~~----------------------------------- 247 (488)
.+|+|||+|+.|+-+|..|++.|.+ |+++++.+.+.+. .+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g~ 84 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSGA 84 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCCC
Confidence 5799999999999999999999999 9999987543110 00
Q ss_pred ---------------------CHHHHHHHHHHHHH-cC-cEEEcCCeEEEEEeCCCCcEEEEEeCC---C--cEEEcCEE
Q 011322 248 ---------------------TPSLAQRYEQLYQQ-NG-VKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTI 299 (488)
Q Consensus 248 ---------------------~~~~~~~~~~~l~~-~G-V~v~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~v 299 (488)
...+.+.+.+.+++ .| +++++++++++++. +++ + .+.+.+ | +++.+|+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v-~v~~~~~~~g~~~~~~ad~v 161 (410)
T 3c96_A 85 TVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-R-VLIGARDGHGKPQALGADVL 161 (410)
T ss_dssp EEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-E-EEEEEEETTSCEEEEEESEE
T ss_pred EEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-c-EEEEecCCCCCceEEecCEE
Confidence 01344556666665 35 68999999999986 444 3 355554 7 57999999
Q ss_pred EEeecCcCC
Q 011322 300 VIGIGAKPT 308 (488)
Q Consensus 300 i~a~G~~p~ 308 (488)
|.|.|....
T Consensus 162 V~AdG~~S~ 170 (410)
T 3c96_A 162 VGADGIHSA 170 (410)
T ss_dssp EECCCTTCH
T ss_pred EECCCccch
Confidence 999998764
No 291
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.79 E-value=0.00018 Score=73.24 Aligned_cols=100 Identities=20% Similarity=0.226 Sum_probs=76.6
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc----------------------cc-----------------
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------------------RL----------------- 246 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~----------------------~~----------------- 246 (488)
....|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. ..
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecc
Confidence 445799999999999999999999999999997632110 00
Q ss_pred ---c-----------CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc---EEEcCEEEEeecCcC
Q 011322 247 ---F-----------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDADTIVIGIGAKP 307 (488)
Q Consensus 247 ---~-----------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~---~i~~D~vi~a~G~~p 307 (488)
. ...+.+.+.+.+++.|+++++++++++++.+++ .+ .+++.+++ ++.+|+||.|.|...
T Consensus 90 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v-~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 90 FGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA-GV-TVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECCCTTC
T ss_pred cccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC-eE-EEEEEcCCCCEEEEeCEEEECCCcch
Confidence 0 023556667777888999999999999986544 34 46676664 799999999999875
No 292
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.76 E-value=4.5e-05 Score=75.64 Aligned_cols=63 Identities=24% Similarity=0.254 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEE---------EEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhH-hcCC
Q 011322 251 LAQRYEQLYQQNGVKFVKGASIK---------NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE-RVGL 317 (488)
Q Consensus 251 ~~~~~~~~l~~~GV~v~~~~~v~---------~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~-~~gl 317 (488)
+...+.+.+++.|++++.+++|+ ++..+ ++.+ .|.+.+| ++.+|.||+|+|.... .+++ .+++
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s~-~l~~~~~g~ 246 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAGP-ALVEQGLGL 246 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGHH-HHHHHHHCC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccHH-HHHHHhcCC
Confidence 44556677778899999999999 77643 3444 5666666 7999999999998753 4555 4443
No 293
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.75 E-value=3.4e-05 Score=78.63 Aligned_cols=100 Identities=17% Similarity=0.211 Sum_probs=70.7
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccc---------cC---HHHHHHHHHHHHHcCcEEEcCCeEEE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL---------FT---PSLAQRYEQLYQQNGVKFVKGASIKN 274 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~---------~~---~~~~~~~~~~l~~~GV~v~~~~~v~~ 274 (488)
..+|+|||+|+.|+.+|..|++. .+|+++++.+.+-... ++ .++...+.+.+ +.|++++.++.+.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~ 185 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALG 185 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEE
Confidence 35799999999999999999999 9999999887552110 11 12223333333 56999999999988
Q ss_pred EEeCCCCcEEEEEeCCCc--EEEcCEEEEeecCcCCC
Q 011322 275 LEAGSDGRVAAVKLEDGS--TIDADTIVIGIGAKPTV 309 (488)
Q Consensus 275 i~~~~~~~v~~v~~~~g~--~i~~D~vi~a~G~~p~~ 309 (488)
+...+ ..+......+++ ++.+|.+|+|||..|..
T Consensus 186 i~~~~-~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~ 221 (493)
T 1y56_A 186 VFDKG-EYFLVPVVRGDKLIEILAKRVVLATGAIDST 221 (493)
T ss_dssp CEECS-SSEEEEEEETTEEEEEEESCEEECCCEEECC
T ss_pred EEcCC-cEEEEEEecCCeEEEEECCEEEECCCCCccC
Confidence 87543 333222334554 68999999999998764
No 294
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.73 E-value=2.6e-05 Score=76.04 Aligned_cols=37 Identities=16% Similarity=0.355 Sum_probs=33.3
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+.+++||+|||||++|+++|++|++.|. +|+|+|++.
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~---~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGY---SVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCC---EEEEEeccC
Confidence 3456899999999999999999999987 899999875
No 295
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.73 E-value=1.3e-05 Score=81.00 Aligned_cols=41 Identities=27% Similarity=0.519 Sum_probs=34.5
Q ss_pred cEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 264 VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 264 V~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
+++++++.|++|+..+++ + .|.+.+|+++.+|.||+|++..
T Consensus 248 ~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vi~a~p~~ 288 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSC-Y-SLELDNGVTLDADSVIVTAPHK 288 (470)
T ss_dssp EEEECSCCEEEEEECSSS-E-EEEESSSCEEEESEEEECSCHH
T ss_pred CEEEeCCceEEEEEcCCe-E-EEEECCCCEEECCEEEECCCHH
Confidence 699999999999876444 3 6888999889999999998753
No 296
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.73 E-value=0.00027 Score=69.68 Aligned_cols=59 Identities=24% Similarity=0.374 Sum_probs=42.7
Q ss_pred HHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcC
Q 011322 254 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 316 (488)
Q Consensus 254 ~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~g 316 (488)
.+.+.+++.|++++.++.|++++.++ +.+ .|.+.+| ++.+|.||+|+|.... .+++.++
T Consensus 158 ~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~v-~v~t~~g-~i~a~~VV~A~G~~s~-~l~~~~g 216 (397)
T 2oln_A 158 ALFTLAQAAGATLRAGETVTELVPDA-DGV-SVTTDRG-TYRAGKVVLACGPYTN-DLLEPLG 216 (397)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEEET-TEE-EEEESSC-EEEEEEEEECCGGGHH-HHHGGGT
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEcC-CeE-EEEECCC-EEEcCEEEEcCCcChH-HHhhhcC
Confidence 34455677899999999999998653 334 4666665 6999999999998643 3445444
No 297
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.70 E-value=0.00031 Score=71.82 Aligned_cols=55 Identities=16% Similarity=0.262 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 253 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 253 ~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
..+.+.+++.|++++.+ +|++++.++++.+..|.+.+|+++.+|.||.|+|....
T Consensus 177 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 177 RYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 44555667789999999 99999875566667888899988999999999999764
No 298
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.70 E-value=5.7e-05 Score=77.45 Aligned_cols=97 Identities=15% Similarity=0.241 Sum_probs=66.2
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++++|||||+.|+.+|..|++.|. +|+++++....+ .+.. .+ .....+.
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~---~Vtlv~~~~~l~----~~d~-----------~~-----------~~~~~~~ 259 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGL---DVTVMVRSILLR----GFDQ-----------DM-----------ANKIGEH 259 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSST----TSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCC---eEEEEecccccc----cCCH-----------HH-----------HHHHHHH
Confidence 35679999999999999999999986 899998642111 0000 00 1123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC----c--EEE--eCCC-c--EEEeccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDIEK----Q--TLI--TNSG-K--LLKYGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~----~--~v~--~~~g-~--~i~yd~lVlAtG~~~~ 175 (488)
+++.+|+++.++.+..+.... . .++ ..++ + ++.+|.+++|+|..|.
T Consensus 260 l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 260 MEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp HHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCccc
Confidence 788999999987766665321 2 232 2344 2 5789999999998775
No 299
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.69 E-value=0.00023 Score=77.34 Aligned_cols=63 Identities=25% Similarity=0.335 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCCChhhHhcC
Q 011322 251 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 316 (488)
Q Consensus 251 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~g 316 (488)
+...+.+.+++.|++++.++.|++++.. ++.+..|.+.+| ++.||.||+|+|.... .+++..|
T Consensus 153 l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~-~l~~~~g 215 (830)
T 1pj5_A 153 AVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWGA-KIGAMIG 215 (830)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGHH-HHHHTTT
T ss_pred HHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccchH-HHHHHhC
Confidence 3344566677889999999999999864 455656778777 7999999999998653 3444333
No 300
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.68 E-value=0.00041 Score=69.00 Aligned_cols=50 Identities=22% Similarity=0.408 Sum_probs=40.1
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcC
Q 011322 256 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 307 (488)
Q Consensus 256 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 307 (488)
.+.+++.|+++++++.|++|..+ ++++..|.++ |+++.+|.||+|+|...
T Consensus 203 ~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 203 ETVISANGGKIHTGQEVSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHH
T ss_pred HHHHHHcCCEEEECCceeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHH
Confidence 35566789999999999999865 4566667765 77899999999998754
No 301
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.67 E-value=0.00025 Score=72.87 Aligned_cols=55 Identities=16% Similarity=0.266 Sum_probs=44.0
Q ss_pred HHHHHHHHH-cCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 253 QRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 253 ~~~~~~l~~-~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
+.+.+.+++ .|++++.+ +|++++.++++.+..|.+.+|+++.+|+||.|+|....
T Consensus 179 ~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 344555666 79999999 69999876566666788888888999999999999764
No 302
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.66 E-value=2.9e-05 Score=77.67 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=31.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
++++|+|||||++|+++|..|++.|+ +|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~---~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDV---DVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTC---EEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCC---eEEEEcCCC
Confidence 45799999999999999999999988 899999976
No 303
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.65 E-value=2.2e-05 Score=79.18 Aligned_cols=91 Identities=14% Similarity=0.184 Sum_probs=69.2
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCC--CcEEEEecCCCCc--------cc-ccCHHHHHHHHHHHHHcCcEEEcCCeEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLL--------QR-LFTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g--~~vtlv~~~~~~~--------~~-~~~~~~~~~~~~~l~~~GV~v~~~~~v~~ 274 (488)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. ....++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3578999999999999999999988 8999999987664 11 1123466677788888999999987652
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcC
Q 011322 275 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 307 (488)
Q Consensus 275 i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p 307 (488)
. .|.+++. ++.+|.||+|||..|
T Consensus 84 ------~---~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ------R---DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp ------T---TBCHHHH-HHHSSEEEECCCCCE
T ss_pred ------e---EEEeccc-eEEcCEEEEecCcCC
Confidence 1 1333333 478999999999985
No 304
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.65 E-value=4.9e-05 Score=74.05 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=34.7
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC-CCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE-AYA 89 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~-~~~ 89 (488)
+...++|+|||||++||+||..|++.|+ +|+|+|++ +..
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~---~V~VlE~~~~~v 80 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGH---DVTILEANANRV 80 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSC---EEEEECSCSSCC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCC---cEEEEecccccc
Confidence 4456899999999999999999999987 89999998 654
No 305
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.65 E-value=2.8e-05 Score=86.24 Aligned_cols=93 Identities=20% Similarity=0.264 Sum_probs=71.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-cEEEEecCCCCcc--------cccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEe
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHLLQ--------RLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 277 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~-~vtlv~~~~~~~~--------~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 277 (488)
+++|+|||+|+.|+.+|..|++.|. +|+++++.+.+.. ..++.+..++..+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 5789999999999999999999998 7999999865421 113445666667788999999999976521
Q ss_pred CCCCcEEEEEeCCCcEEEcCEEEEeecC-cCC
Q 011322 278 GSDGRVAAVKLEDGSTIDADTIVIGIGA-KPT 308 (488)
Q Consensus 278 ~~~~~v~~v~~~~g~~i~~D~vi~a~G~-~p~ 308 (488)
. .+.+++++++.+|.||+|||. +|.
T Consensus 264 ---~---~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 264 ---N---EITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp ---T---SBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred ---c---eEEhhhcCccCCCEEEEecCCCCCC
Confidence 1 234455556889999999998 475
No 306
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.63 E-value=5.2e-05 Score=80.56 Aligned_cols=99 Identities=13% Similarity=0.178 Sum_probs=72.6
Q ss_pred CCCeEEEEc--CchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 50 ENREFVIVG--GGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 50 ~~~~vvIIG--gG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
..++|+||| +|..|+.+|..|++.|. +|++++..+...- .... ... .....
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~---~Vtlv~~~~~l~~--------~~~~-----~~~-----------~~~l~ 574 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGY---EVSIVTPGAQVSS--------WTNN-----TFE-----------VNRIQ 574 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTC---EEEEEESSSSTTG--------GGGG-----GTC-----------HHHHH
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCC---eeEEEeccccccc--------cccc-----chh-----------HHHHH
Confidence 356899999 99999999999999986 8999997754210 0000 000 01235
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEe---CCCcEEEeccEEecCCCCCC
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEKQTLIT---NSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~~~v~~---~~g~~i~yd~lVlAtG~~~~ 175 (488)
+.+++.+++++.+++|++++.+...+.. .+++++++|.||+|+|..|.
T Consensus 575 ~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 575 RRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp HHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred HHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 6678899999999999999876655553 24567999999999997654
No 307
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.62 E-value=0.00023 Score=78.41 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=71.6
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccc-------c----CHHHHHHHHHHHHHc-CcEEEcCCeEEE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-------F----TPSLAQRYEQLYQQN-GVKFVKGASIKN 274 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~-------~----~~~~~~~~~~~l~~~-GV~v~~~~~v~~ 274 (488)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+-... + ..+....+.+.+.+. +++++.++.+..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 3579999999999999999999999999999876542111 1 123334445556664 999999999988
Q ss_pred EEeCCCCcEEEEEe---------------CCCcEEEcCEEEEeecCcCCC
Q 011322 275 LEAGSDGRVAAVKL---------------EDGSTIDADTIVIGIGAKPTV 309 (488)
Q Consensus 275 i~~~~~~~v~~v~~---------------~~g~~i~~D~vi~a~G~~p~~ 309 (488)
+.. .+.+..+.. .++.++.+|.||+|||..|..
T Consensus 208 i~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 208 SYD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp EET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred eec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 863 222222211 112368999999999998754
No 308
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.61 E-value=5.8e-05 Score=75.25 Aligned_cols=54 Identities=17% Similarity=0.271 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 250 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
.+........++.+.++++++.|++|+.. ++.+ .|.+.+|+ +.+|.||++++..
T Consensus 204 g~~~l~~~l~~~l~~~v~~~~~V~~i~~~-~~~v-~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 204 GTQAMFEHLNATLEHPAERNVDITRITRE-DGKV-HIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp CHHHHHHHHHHHSSSCCBCSCCEEEEECC-TTCE-EEEESSCE-EEESEEEECSCHH
T ss_pred hHHHHHHHHHHhhcceEEcCCEEEEEEEE-CCEE-EEEECCCe-EEcCEEEECCCHH
Confidence 34555555556667788999999999865 4445 47888875 8999999998864
No 309
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.60 E-value=4.7e-05 Score=77.15 Aligned_cols=55 Identities=29% Similarity=0.465 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 250 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
.+.+.+.+.+++.|+++++++.|++|+..+++.+ .|.+ ++.++.+|.||+|++..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~-~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRW-KVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCE-EEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceE-EEEE-CCeEEEcCEEEECCCHH
Confidence 5777888888999999999999999986543323 5655 55579999999998753
No 310
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.59 E-value=1.9e-05 Score=79.62 Aligned_cols=89 Identities=15% Similarity=0.203 Sum_probs=68.3
Q ss_pred CCeEEEECCcHHHHHHHHHHHh-C------CCcEEEEecCCCCccc---------ccCHHHHHHHHHHHHHcCcEEEcCC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVG-W------KLDTTIIFPENHLLQR---------LFTPSLAQRYEQLYQQNGVKFVKGA 270 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~-~------g~~vtlv~~~~~~~~~---------~~~~~~~~~~~~~l~~~GV~v~~~~ 270 (488)
.++|+|||+|+.|+.+|..|.+ . +.+|+++++.+.+... ....++...+.+.+++.||+++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999998 7 8999999998765421 1223566677778888899999885
Q ss_pred eEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 271 SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 271 ~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
.+ + . .|.++++ ++.+|.||+|||..
T Consensus 83 ~v-----~--~---~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV-----G--E---HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB-----T--T---TBCHHHH-HHHSSEEEECCCCC
T ss_pred EE-----C--C---EEEECCC-eEeCCEEEEeeCCC
Confidence 43 1 1 2445555 48899999999997
No 311
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.59 E-value=0.00011 Score=76.79 Aligned_cols=97 Identities=11% Similarity=0.205 Sum_probs=66.4
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++|+|||||+.|+.+|..|++.|. +|+++++.... +.+.. .+ .....+.
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~l----~~~d~-----------~~-----------~~~~~~~ 335 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLGG---DVTVMVRSILL----RGFDQ-----------QM-----------AEKVGDY 335 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSS----TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEECCcCc----CcCCH-----------HH-----------HHHHHHH
Confidence 34689999999999999999999986 79999976211 00000 00 0123455
Q ss_pred HHHCCcEEEeCCcEEEEeC-------C--CcE--EE--eCCCcEEE--eccEEecCCCCCC
Q 011322 130 YKEKGIEMIYQDPVTSIDI-------E--KQT--LI--TNSGKLLK--YGSLIVATGCTAS 175 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~-------~--~~~--v~--~~~g~~i~--yd~lVlAtG~~~~ 175 (488)
+++.|++++.++.+..+.. . ... +. ..+|+++. +|.+|+|+|..|.
T Consensus 336 l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 336 MENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp HHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEEC
T ss_pred HHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccc
Confidence 6788999999877766632 1 122 32 35776555 9999999998765
No 312
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.58 E-value=3.8e-05 Score=78.81 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=34.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcC-CCCCcEEEEcCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEAYAP 90 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g-~~~~~V~lie~~~~~~ 90 (488)
++++|+|||||+|||+||..|++.| + +|+|+|+++...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~---~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQ---DCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCC---SEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCC---CEEEEeCCCCCC
Confidence 4579999999999999999999998 6 899999997653
No 313
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.57 E-value=3.8e-05 Score=77.36 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=33.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
.++||+|||||++||+||..|++.|+ +|+|+|+++..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~ 40 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGL---SVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---cEEEEECCCCC
Confidence 45799999999999999999999987 79999998765
No 314
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.56 E-value=5.6e-05 Score=75.30 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=32.0
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
+||+|||||++|++||+.|++.|. +|+|+|+++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~---~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGH---EVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTC---EEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC---ceEEEeCCCCC
Confidence 489999999999999999999987 89999998753
No 315
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.54 E-value=7.5e-05 Score=75.21 Aligned_cols=59 Identities=19% Similarity=0.228 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCC-CCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGS-DGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 249 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~-~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
..+.+.+.+.+++.|+++++++.|++|.... ++++..|.+ +|+++.||.||+++|..+.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4677888888999999999999999998642 566666776 5788999999999998764
No 316
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.53 E-value=0.00064 Score=69.28 Aligned_cols=60 Identities=15% Similarity=0.182 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEeecCcCCChhhH
Q 011322 251 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAKPTVSPFE 313 (488)
Q Consensus 251 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vi~a~G~~p~~~~~~ 313 (488)
+...+.+.+++.|++++.+++|+++..++ .+..|.+ .+|+ ++.+|.||.|+|.... .+.+
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~-~l~~ 215 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK-QFFD 215 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHH-HHHH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHH-HHHH
Confidence 34455666778899999999999998643 4456666 3565 7999999999998754 3443
No 317
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.52 E-value=7.9e-05 Score=73.68 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=34.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHc-CCCCCcEEEEcCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAP 90 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~-g~~~~~V~lie~~~~~~ 90 (488)
.++||+|||||++|++||..|++. |. +|+|+|+++...
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~---~v~v~E~~~~~G 44 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDK---RVLVLERRPHIG 44 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCC---CEEEECSSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCC---CEEEEeCCCCCC
Confidence 368999999999999999999998 77 899999997653
No 318
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.51 E-value=9e-05 Score=75.37 Aligned_cols=39 Identities=18% Similarity=0.353 Sum_probs=34.6
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 90 (488)
++.++|+|||||+|||+||..|++.|+ +|+|+|+.+...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~---~v~v~E~~~~~G 47 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGY---KVTVLEARTRPG 47 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeccCCCC
Confidence 446799999999999999999999987 899999987643
No 319
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.51 E-value=0.00016 Score=76.66 Aligned_cols=87 Identities=17% Similarity=0.288 Sum_probs=66.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc-----ccC-----HHHHHHHHHHHHHcCcEEEcCCeEEEEE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----LFT-----PSLAQRYEQLYQQNGVKFVKGASIKNLE 276 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~-----~~~-----~~~~~~~~~~l~~~GV~v~~~~~v~~i~ 276 (488)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .++ .+....+.+.+++.||+++.++.++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 468999999999999999999999999999988654211 011 13345566778888999998875421
Q ss_pred eCCCCcEEEEEeCCCcEE-EcCEEEEeecCcCCCh
Q 011322 277 AGSDGRVAAVKLEDGSTI-DADTIVIGIGAKPTVS 310 (488)
Q Consensus 277 ~~~~~~v~~v~~~~g~~i-~~D~vi~a~G~~p~~~ 310 (488)
..+ .+|.||+|||.+|...
T Consensus 451 ---------------~~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 451 ---------------DQLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ---------------SSSCCSSEEEECCCEEECCC
T ss_pred ---------------HHhhcCCEEEEccCCCcCCC
Confidence 124 8999999999988753
No 320
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.50 E-value=9e-05 Score=72.80 Aligned_cols=40 Identities=25% Similarity=0.417 Sum_probs=35.0
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 90 (488)
....+||+|||||++|+++|..|++.|. +|+|+|+.+...
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~---~v~v~E~~~~~G 65 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQ---RVLIVDRRPHIG 65 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCC---ceEEEeccCCCC
Confidence 3456899999999999999999999987 799999987653
No 321
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.50 E-value=0.001 Score=69.02 Aligned_cols=52 Identities=21% Similarity=0.222 Sum_probs=39.8
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEeecCc
Q 011322 255 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAK 306 (488)
Q Consensus 255 ~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vi~a~G~~ 306 (488)
+.+.+++.||+++.++.++++..++++++.+|.. .+|+ ++.++.||+|+|-.
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 4455567799999999999998643566766664 4665 58999999999963
No 322
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.47 E-value=8.2e-05 Score=76.46 Aligned_cols=44 Identities=23% Similarity=0.244 Sum_probs=34.7
Q ss_pred HH-CCcEEEeCCcEEEEeCCC--c--EEEeCCCcEEEeccEEecCCCCCC
Q 011322 131 KE-KGIEMIYQDPVTSIDIEK--Q--TLITNSGKLLKYGSLIVATGCTAS 175 (488)
Q Consensus 131 ~~-~~v~~~~~~~v~~id~~~--~--~v~~~~g~~i~yd~lVlAtG~~~~ 175 (488)
.+ .|++++.+ +|+++..+. . .|++.+|.++.+|.||.|+|....
T Consensus 186 ~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 186 TQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 45 79999998 699997542 2 566777777999999999998654
No 323
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.47 E-value=9.1e-05 Score=75.03 Aligned_cols=39 Identities=23% Similarity=0.180 Sum_probs=33.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
+++||+|||||++|+++|+.|++.|. +.+|+|+|+++..
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~-~~~v~v~E~~~~~ 41 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFP-DLNITLLEAGERL 41 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCT-TSEEEEECSSSSS
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCC-CCCEEEEECCCCC
Confidence 35799999999999999999999982 3489999997654
No 324
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.46 E-value=0.00071 Score=69.90 Aligned_cols=61 Identities=18% Similarity=0.147 Sum_probs=44.4
Q ss_pred HHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC---C--cEEEcCEEEEeecCcCCChhhHhcC
Q 011322 254 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGIGAKPTVSPFERVG 316 (488)
Q Consensus 254 ~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~vi~a~G~~p~~~~~~~~g 316 (488)
.+.+.+++.|++++.+++|+++..+ ++.+.+|.+.+ | .++.+|.||.|+|.... .+.+..+
T Consensus 175 ~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~-~l~~~~g 240 (561)
T 3da1_A 175 EIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVD-TLREKDR 240 (561)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHH-HHHHTTT
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcchH-HHHHhcC
Confidence 3445567789999999999999864 55666676653 3 46899999999997653 3444444
No 325
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.46 E-value=0.00063 Score=68.72 Aligned_cols=97 Identities=19% Similarity=0.281 Sum_probs=70.2
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc----------c--------------------------------
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------L-------------------------------- 246 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~----------~-------------------------------- 246 (488)
.|+|||+|..|+-+|..|++.|.+|+++++.. .... .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~-~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRI-DGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSST-TCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 37999999999999999999999999998761 0000 0
Q ss_pred ---------------c----------------------CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeC
Q 011322 247 ---------------F----------------------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE 289 (488)
Q Consensus 247 ---------------~----------------------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~ 289 (488)
+ ...+...+.+.+++.||+++.++.+ ++..+ ++.+.++...
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~ 157 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTE 157 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEET
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEE
Confidence 0 0123444555567789999999999 98754 4566566543
Q ss_pred -CCcEEEcCEEEEeecCcCC
Q 011322 290 -DGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 290 -~g~~i~~D~vi~a~G~~p~ 308 (488)
++.++.+|.||+|+|..+.
T Consensus 158 ~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 158 KRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp TTEEECCCSEEEECCCCCGG
T ss_pred eCCCeEEeeeEEECCCCCcc
Confidence 2335789999999998764
No 326
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.41 E-value=0.00011 Score=72.07 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=31.7
Q ss_pred CeEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCCCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 89 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~lie~~~~~ 89 (488)
++|+|||||++|+++|..|++. |. +|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~---~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLW---AIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS---EEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCC---CEEEEECCCCC
Confidence 4899999999999999999998 77 89999998654
No 327
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.39 E-value=0.00014 Score=73.76 Aligned_cols=39 Identities=21% Similarity=0.173 Sum_probs=34.0
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
+++++|+|||||++|+++|..|++.|. .+|+|+|+++..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~--~~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGY--KNWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTC--CSEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCC--CCEEEEeCCCCC
Confidence 456899999999999999999999872 289999998765
No 328
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.38 E-value=0.00012 Score=74.16 Aligned_cols=39 Identities=18% Similarity=0.264 Sum_probs=32.7
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
...++||+|||||++|++||..|++.|+ +|+|+|+++..
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~---~v~v~E~~~~~ 51 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGT---DAVLLESSARL 51 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTC---CEEEECSSSSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEEcCCCC
Confidence 3456899999999999999999999987 89999998764
No 329
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.37 E-value=0.0001 Score=71.51 Aligned_cols=36 Identities=14% Similarity=0.073 Sum_probs=30.9
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCC---CCCcEEEEcCCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGM---ADGRLCIVSKEA 87 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~---~~~~V~lie~~~ 87 (488)
+||+|||||++|+++|++|+++|. ++.+|+|+|++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 489999999999999999999971 123899999986
No 330
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.33 E-value=0.00015 Score=73.95 Aligned_cols=38 Identities=21% Similarity=0.347 Sum_probs=33.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 90 (488)
++++|+|||||++||+||..|++.|+ +|+|+|+.+...
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~G 49 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGL---NVTVFEAEGKAG 49 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSC---EEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEEeCCCCC
Confidence 46899999999999999999999987 899999997653
No 331
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.33 E-value=0.001 Score=70.00 Aligned_cols=100 Identities=19% Similarity=0.267 Sum_probs=73.9
Q ss_pred CeEEEECCcHHHHHHHHHHHh-CCCcEEEEecCCCCcc------------------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVG-WKLDTTIIFPENHLLQ------------------------------------------ 244 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~-~g~~vtlv~~~~~~~~------------------------------------------ 244 (488)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+.+..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 469999999999999999999 9999999997632110
Q ss_pred --c---------------------ccC-HHHHHHHHHHHHHcCc--EEEcCCeEEEEEeCCC--CcEEEEEeC------C
Q 011322 245 --R---------------------LFT-PSLAQRYEQLYQQNGV--KFVKGASIKNLEAGSD--GRVAAVKLE------D 290 (488)
Q Consensus 245 --~---------------------~~~-~~~~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~--~~v~~v~~~------~ 290 (488)
. .++ ..+.+.+.+.+++.|+ ++++++++++++.+++ +....+++. +
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 000 1455667777888877 9999999999987542 112245544 4
Q ss_pred C--cEEEcCEEEEeecCcC
Q 011322 291 G--STIDADTIVIGIGAKP 307 (488)
Q Consensus 291 g--~~i~~D~vi~a~G~~p 307 (488)
| +++.+|+||.|.|...
T Consensus 193 G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARS 211 (639)
T ss_dssp TCEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCcch
Confidence 6 5799999999999865
No 332
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.33 E-value=0.00016 Score=70.88 Aligned_cols=88 Identities=15% Similarity=0.185 Sum_probs=67.9
Q ss_pred CeEEEECCcHHHHHHHHHHHhC--CCcEEEEecCCCC----------------------c-cc-----------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL----------------------L-QR----------------- 245 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~--g~~vtlv~~~~~~----------------------~-~~----------------- 245 (488)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.+ . ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3689999999999999999998 9999999987543 0 00
Q ss_pred --------------ccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 246 --------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 246 --------------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
.....+.+.+.+.+++.|++++++++|++++.. +++.+|+||.|.|..+.
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------------CGGGCSEEEECCGGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-------------ccccCCEEEECCCCCch
Confidence 001346677777788889999999988877521 13689999999998663
No 333
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.32 E-value=0.00017 Score=70.82 Aligned_cols=37 Identities=22% Similarity=0.444 Sum_probs=33.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 90 (488)
+++|+|||||++|+++|..|++.|. +|+|+|+++...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGH---QVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---cEEEEEecCCcC
Confidence 4799999999999999999999876 899999987653
No 334
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.31 E-value=0.0002 Score=73.00 Aligned_cols=38 Identities=24% Similarity=0.335 Sum_probs=34.1
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
..+++|+|||||++|++||..|++.|. +|+|+|+.+..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~---~v~vlE~~~~~ 68 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGH---QVTVLEASERP 68 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTC---EEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEECCCCC
Confidence 446899999999999999999999987 89999998754
No 335
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.30 E-value=0.00017 Score=73.35 Aligned_cols=56 Identities=21% Similarity=0.350 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHcC-cEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 249 PSLAQRYEQLYQQNG-VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 249 ~~~~~~~~~~l~~~G-V~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
..+.+.+.+.+++.| +++++++.|++|+..++ .+ .|.+.+|+++.+|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD-AA-RVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS-SE-EEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC-EE-EEEECCCCEEEcCEEEECCCHH
Confidence 356777778888888 99999999999986543 33 5788889889999999999963
No 336
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.27 E-value=7e-05 Score=80.73 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=34.7
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 90 (488)
...++|+|||||++||+||..|++.|+ +|+|+|+.+...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~---~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGM---DVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEEecCcCC
Confidence 456899999999999999999999988 899999987643
No 337
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.26 E-value=0.00025 Score=68.50 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=32.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
++||+|||||+||+.||..|++.|. +|+|+|+.+.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~---~V~liE~~~~ 35 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGV---PVRLFEMRPK 35 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECCTTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCC---cEEEEeccCC
Confidence 3689999999999999999999987 8999998864
No 338
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.25 E-value=0.00018 Score=76.90 Aligned_cols=98 Identities=19% Similarity=0.212 Sum_probs=69.3
Q ss_pred CCCeEEEEc--CchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCH
Q 011322 50 ENREFVIVG--GGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (488)
Q Consensus 50 ~~~~vvIIG--gG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (488)
..++|+||| ||..|+.+|..|++.|. +|+|+++.+ ..- ....+.. .....
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~---~Vtlv~~~~-l~~-------~~~~~~~-----------------~~~~~ 578 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGH---EVTIVSGVH-LAN-------YMHFTLE-----------------YPNMM 578 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTC---EEEEEESSC-TTH-------HHHHTTC-----------------HHHHH
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCC---EEEEEeccc-ccc-------ccccccc-----------------HHHHH
Confidence 357999999 99999999999999986 899999875 210 0000000 01234
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCcEEEe--CCC-cE------------------EEeccEEecCCCCCC
Q 011322 128 EWYKEKGIEMIYQDPVTSIDIEKQTLIT--NSG-KL------------------LKYGSLIVATGCTAS 175 (488)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~id~~~~~v~~--~~g-~~------------------i~yd~lVlAtG~~~~ 175 (488)
+.+++.||+++.++.+.+++.+...+.. .++ +. +.+|.||+|+|..|.
T Consensus 579 ~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 579 RRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp HHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred HHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 5667889999999999999865433432 232 32 899999999997654
No 339
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.24 E-value=0.0002 Score=69.83 Aligned_cols=35 Identities=17% Similarity=0.345 Sum_probs=32.1
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
+||+|||||++|+++|..|++.|. +|+|+|+++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNK---KVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTC---CEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC---cEEEEecCCCC
Confidence 589999999999999999999987 89999998764
No 340
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.23 E-value=0.0015 Score=68.07 Aligned_cols=97 Identities=19% Similarity=0.245 Sum_probs=70.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhCC--CcEEEEecCCCCccc------------------------------c---------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQR------------------------------L--------- 246 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g--~~vtlv~~~~~~~~~------------------------------~--------- 246 (488)
-.|+|||+|..|+-+|..|++.| .+|+++++.+..... .
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 36999999999999999999999 999999876321000 0
Q ss_pred ------------------c----------------------------CHHHHHHHHHHHHHcC-cEEEcCCeEEEEEeCC
Q 011322 247 ------------------F----------------------------TPSLAQRYEQLYQQNG-VKFVKGASIKNLEAGS 279 (488)
Q Consensus 247 ------------------~----------------------------~~~~~~~~~~~l~~~G-V~v~~~~~v~~i~~~~ 279 (488)
+ +..+...+.+.+++.| |+++.++.++++..+
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~- 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD- 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-
Confidence 0 0123334445556677 999999999999864
Q ss_pred CCcEEEEEe---CCCc--EEEcCEEEEeecC
Q 011322 280 DGRVAAVKL---EDGS--TIDADTIVIGIGA 305 (488)
Q Consensus 280 ~~~v~~v~~---~~g~--~i~~D~vi~a~G~ 305 (488)
++++.++.. .+|+ ++.++.||+|+|.
T Consensus 165 ~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 165 DGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp TTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred CCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 466555543 5776 6899999999994
No 341
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.10 E-value=0.0034 Score=64.65 Aligned_cols=95 Identities=19% Similarity=0.303 Sum_probs=68.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc-------------------------------------------
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------------------------------- 244 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~------------------------------------------- 244 (488)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 3699999999999999999999999999997632210
Q ss_pred -c-c---c---------------------C-HHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC---C--c
Q 011322 245 -R-L---F---------------------T-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--S 292 (488)
Q Consensus 245 -~-~---~---------------------~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~---g--~ 292 (488)
. . + + ..+.+.+.+.+++. +++++++++++.++++ + .+++.+ | +
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v-~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V-RATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-EEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-EEEEEECCCCCEE
Confidence 0 0 0 0 12344455555554 8899999999875444 3 355544 6 4
Q ss_pred EEEcCEEEEeecCcC
Q 011322 293 TIDADTIVIGIGAKP 307 (488)
Q Consensus 293 ~i~~D~vi~a~G~~p 307 (488)
++.+|+||.|.|...
T Consensus 182 ~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 182 AVHARYLVACDGASS 196 (549)
T ss_dssp EEEEEEEEECCCTTC
T ss_pred EEEeCEEEECCCCCc
Confidence 799999999999865
No 342
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.09 E-value=0.00048 Score=68.83 Aligned_cols=59 Identities=17% Similarity=0.337 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 248 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
...+.+.+.+.+++.|+++++++.|++|... ++++..|. .+|+++.||.||+++|..+.
T Consensus 233 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 233 LGELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 3467778888888999999999999999864 45665555 47888999999999998764
No 343
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.08 E-value=0.0014 Score=67.39 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=29.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~ 241 (488)
-.|+|||+|..|+-+|..+++ |.+|+++++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 369999999999999999999 999999998753
No 344
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.08 E-value=0.0058 Score=63.19 Aligned_cols=51 Identities=14% Similarity=0.135 Sum_probs=38.5
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeC---CCc--EEEcCEEEEeecCcC
Q 011322 256 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTIVIGIGAKP 307 (488)
Q Consensus 256 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~---~g~--~i~~D~vi~a~G~~p 307 (488)
.+.+++.|++++.+++|+++..+ ++.+..|.+. +|+ ++.+|.||+|+|...
T Consensus 195 ~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 195 IKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 34456789999999999999864 4566566653 343 699999999999764
No 345
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.06 E-value=0.00028 Score=73.06 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=32.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
.++||+|||||++|+++|+.|+++|. +|+|+|+++
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~---~V~LlE~~~ 65 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGI---KTGLIEMQD 65 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCC
Confidence 46899999999999999999999987 899999976
No 346
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.01 E-value=0.0042 Score=64.74 Aligned_cols=51 Identities=20% Similarity=0.180 Sum_probs=37.8
Q ss_pred HHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEeecCcC
Q 011322 256 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAKP 307 (488)
Q Consensus 256 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vi~a~G~~p 307 (488)
.+.+.+.||+++.++.++++..+ ++++.+|.. .+|+ .+.++.||+|+|-..
T Consensus 162 ~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 162 YGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 33345568999999999998754 566666655 4675 689999999999643
No 347
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.00 E-value=0.00055 Score=68.66 Aligned_cols=59 Identities=15% Similarity=0.302 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecCc
Q 011322 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 306 (488)
Q Consensus 248 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~~ 306 (488)
..++.+.+.+.+++.|+++++++.|++|..++++++.+|.+.+|+++.||.||++++..
T Consensus 255 ~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 255 LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 34788888899999999999999999998745678889999999999999999999988
No 348
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.95 E-value=0.0011 Score=67.65 Aligned_cols=32 Identities=22% Similarity=0.215 Sum_probs=29.0
Q ss_pred eEEEECCcHHHHHHHHHHHh-CCCcEEEEecCC
Q 011322 209 KVVVVGGGYIGMEVAAAAVG-WKLDTTIIFPEN 240 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~-~g~~vtlv~~~~ 240 (488)
.|+|||||++|+-+|..|++ .|.+|+|+++++
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 59999999999999999987 599999999873
No 349
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.92 E-value=0.00048 Score=72.37 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=31.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHH---H-cCCCCCcEEEEcCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFV---E-HGMADGRLCIVSKEAY 88 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~---~-~g~~~~~V~lie~~~~ 88 (488)
..+||||||||+||++||..|+ + .|. +|+||||.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~---~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGL---KVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTC---CEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCC---eEEEEeCcCC
Confidence 3579999999999999999999 5 776 8999999864
No 350
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.90 E-value=0.00091 Score=70.59 Aligned_cols=38 Identities=21% Similarity=0.389 Sum_probs=34.3
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
...++|+|||||++|+++|..|++.|+ +|+|+|+.+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~---~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGM---DVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTC---EEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCC---eEEEEecCCCC
Confidence 456899999999999999999999987 89999998764
No 351
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.87 E-value=0.0078 Score=63.15 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=37.9
Q ss_pred HHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEeecCc
Q 011322 255 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAK 306 (488)
Q Consensus 255 ~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vi~a~G~~ 306 (488)
+.+.+.+.||+++.++.++++..+ ++++.++.. .+|+ .+.+|.||+|||-.
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 344455679999999999999753 566666654 5676 48999999999953
No 352
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.80 E-value=0.00056 Score=71.83 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=32.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCC-----CCCcEEEEcCCC-CC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGM-----ADGRLCIVSKEA-YA 89 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~-----~~~~V~lie~~~-~~ 89 (488)
.++|+|||||++||+||+.|.+.|. +..+|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 4789999999999999999999871 013899999987 54
No 353
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.75 E-value=0.0076 Score=63.50 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=29.7
Q ss_pred CeEEEECCcHHHHHHHHHHHh-----CCCcEEEEecC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVG-----WKLDTTIIFPE 239 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~-----~g~~vtlv~~~ 239 (488)
..|+|||+|+.|+-+|..|++ .|.+|+++++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~ 45 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKR 45 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCC
Confidence 369999999999999999999 99999999976
No 354
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.68 E-value=0.012 Score=62.85 Aligned_cols=42 Identities=17% Similarity=0.365 Sum_probs=34.9
Q ss_pred cCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecC
Q 011322 262 NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 305 (488)
Q Consensus 262 ~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~ 305 (488)
.|++|++++.|++|+..+++ + .|.+.+|+++.+|.||+|+..
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~-v-~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDE-V-QVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSS-E-EEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCE-E-EEEECCCcEEEcCEEEECCCH
Confidence 37899999999999865443 4 588889989999999999864
No 355
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.64 E-value=0.011 Score=59.13 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=32.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhCC------CcEEEEecCCCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWK------LDTTIIFPENHL 242 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g------~~vtlv~~~~~~ 242 (488)
++|+|||+|.+|+-+|..|++.| .+|+++++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 57999999999999999999999 899999987654
No 356
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.61 E-value=0.0018 Score=65.30 Aligned_cols=41 Identities=22% Similarity=0.368 Sum_probs=34.7
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeecC
Q 011322 263 GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 305 (488)
Q Consensus 263 GV~v~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vi~a~G~ 305 (488)
|.++++++.|++|+..+ +.+ .|.+.+|+++.+|.||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~-~~v-~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSP-GGV-TVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECS-SCE-EEEETTSCEEEESEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcC-CcE-EEEECCCCEEEcCEEEEecCH
Confidence 67899999999998754 344 488899999999999999875
No 357
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.55 E-value=0.016 Score=60.74 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=36.6
Q ss_pred HHHHc-Cc-EEEcCCeEEEEEeCCC--CcEEEEEe---CCCc--EEEcCEEEEeecCc
Q 011322 258 LYQQN-GV-KFVKGASIKNLEAGSD--GRVAAVKL---EDGS--TIDADTIVIGIGAK 306 (488)
Q Consensus 258 ~l~~~-GV-~v~~~~~v~~i~~~~~--~~v~~v~~---~~g~--~i~~D~vi~a~G~~ 306 (488)
.+++. || +++.++.++++..+++ +++.+|.. .+|+ .+.++.||+|+|-.
T Consensus 160 ~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 160 AAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp HHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 34455 89 9999999999986533 27776653 5665 68999999999964
No 358
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.54 E-value=0.0018 Score=66.65 Aligned_cols=64 Identities=16% Similarity=0.272 Sum_probs=47.7
Q ss_pred HHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC---Cc--EE---EcCEEEEeecCcCCChhhHhcCCc
Q 011322 254 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TI---DADTIVIGIGAKPTVSPFERVGLN 318 (488)
Q Consensus 254 ~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i---~~D~vi~a~G~~p~~~~~~~~gl~ 318 (488)
++....++.|+++++++.|+++..+ ++++.+|++.+ |+ ++ .++.||+|+|......++..+|+.
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 4444444469999999999999864 46777888865 64 34 889999999987655677777764
No 359
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.50 E-value=0.001 Score=68.27 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=42.7
Q ss_pred HHHcCcEEEcCCeEEEEEeCCC--CcEEEEEeC--CCc--EE---EcCEEEEeecCcCCChhhHhcCC
Q 011322 259 YQQNGVKFVKGASIKNLEAGSD--GRVAAVKLE--DGS--TI---DADTIVIGIGAKPTVSPFERVGL 317 (488)
Q Consensus 259 l~~~GV~v~~~~~v~~i~~~~~--~~v~~v~~~--~g~--~i---~~D~vi~a~G~~p~~~~~~~~gl 317 (488)
.++.|+++++++.|+++..+++ +++.+|... +|+ ++ .++.||+|+|.-.+..++..+|+
T Consensus 204 ~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGi 271 (536)
T 1ju2_A 204 GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGV 271 (536)
T ss_dssp SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCC
Confidence 4567999999999999986543 477788774 465 34 57899999997644455555554
No 360
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.26 E-value=0.0024 Score=65.45 Aligned_cols=58 Identities=19% Similarity=0.367 Sum_probs=42.3
Q ss_pred HHcCcEEEcCCeEEEEEeCCCCcEEEEEeCCC---cEEEcCEEEEeecCcCCChhhHhcCCc
Q 011322 260 QQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG---STIDADTIVIGIGAKPTVSPFERVGLN 318 (488)
Q Consensus 260 ~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~g---~~i~~D~vi~a~G~~p~~~~~~~~gl~ 318 (488)
.+.++.+..++.+.++..+ ++++++|...+. .++.++.||+|.|..-...+|..+|+.
T Consensus 222 ~r~nl~v~~~~~v~~i~~~-~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~SGig 282 (526)
T 3t37_A 222 GRKNLTILTGSRVRRLKLE-GNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRSGIG 282 (526)
T ss_dssp TCTTEEEECSCEEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHTTEE
T ss_pred CCCCeEEEeCCEEEEEEec-CCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhccCC
Confidence 3568999999999999864 556666655332 357889999999986655677766653
No 361
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.23 E-value=0.0025 Score=65.79 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=41.2
Q ss_pred HHcCcEEEcCCeEEEEEeCC-CCcEEEEEeC--CCc--EEEc-CEEEEeecCcCCChhhHhcCC
Q 011322 260 QQNGVKFVKGASIKNLEAGS-DGRVAAVKLE--DGS--TIDA-DTIVIGIGAKPTVSPFERVGL 317 (488)
Q Consensus 260 ~~~GV~v~~~~~v~~i~~~~-~~~v~~v~~~--~g~--~i~~-D~vi~a~G~~p~~~~~~~~gl 317 (488)
++.|+++++++.++++.-++ ++++++|++. +|+ ++.+ ..||+|+|.-....+|..+|+
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGI 280 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGI 280 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCC
Confidence 45699999999999997643 5677788774 354 4566 569999997654455555554
No 362
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.18 E-value=0.016 Score=60.80 Aligned_cols=51 Identities=14% Similarity=0.208 Sum_probs=36.5
Q ss_pred HHHHHHHc--CcEEEcCCeEEEEEeCCC--CcEEEEEe---CCCc--EEEcCEEEEeecC
Q 011322 255 YEQLYQQN--GVKFVKGASIKNLEAGSD--GRVAAVKL---EDGS--TIDADTIVIGIGA 305 (488)
Q Consensus 255 ~~~~l~~~--GV~v~~~~~v~~i~~~~~--~~v~~v~~---~~g~--~i~~D~vi~a~G~ 305 (488)
+.+.+++. ||+++.++.++++..+++ +++.+|.. .+|+ .+.++.||+|||-
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 34444555 899999988888776544 37777654 4554 5899999999994
No 363
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.14 E-value=0.027 Score=57.09 Aligned_cols=61 Identities=16% Similarity=0.186 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCC------cEEEEEeCCC-----cEEEcCEEEEeecCcCCCh
Q 011322 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG------RVAAVKLEDG-----STIDADTIVIGIGAKPTVS 310 (488)
Q Consensus 250 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~------~v~~v~~~~g-----~~i~~D~vi~a~G~~p~~~ 310 (488)
++.++++...++.+..+.++++|++++..+.+ ....|+..++ +++.|+.||+|+|..|...
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCC
Confidence 46666776667777789999999999864332 1234555443 3688999999999888754
No 364
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.12 E-value=0.022 Score=57.02 Aligned_cols=34 Identities=26% Similarity=0.495 Sum_probs=31.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
.++|+|+|+|-.|.+.|..|.+.|+ +|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~---~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENN---DITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTE---EEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCC---CEEEEECCH
Confidence 4589999999999999999998877 899999987
No 365
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.03 E-value=0.0061 Score=55.77 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=31.9
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
.|+|||+|+.|+-+|..|++.|.+|+|+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999988765
No 366
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.99 E-value=0.004 Score=64.24 Aligned_cols=66 Identities=15% Similarity=0.309 Sum_probs=46.2
Q ss_pred HHHHHHHHHHcCcEEEcCCeEEEEEeCC---CCcEEEEEeC--CCc--EEEcC-EEEEeecCcCCChhhHhcCC
Q 011322 252 AQRYEQLYQQNGVKFVKGASIKNLEAGS---DGRVAAVKLE--DGS--TIDAD-TIVIGIGAKPTVSPFERVGL 317 (488)
Q Consensus 252 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~---~~~v~~v~~~--~g~--~i~~D-~vi~a~G~~p~~~~~~~~gl 317 (488)
..++...+++.+++|++++.|++|.-++ ++++++|++. +|+ ++.+. -||+|+|.--...+|..+|+
T Consensus 230 ~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGI 303 (583)
T 3qvp_A 230 REWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGI 303 (583)
T ss_dssp HHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTB
T ss_pred HHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCC
Confidence 3444445567899999999999997543 5678888764 564 46775 69999998655455555443
No 367
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.97 E-value=0.0055 Score=62.35 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=43.0
Q ss_pred HHHc-CcEEEcCCeEEEEEeCCCC-cEEEEEeC--CC-----cEEEcCEEEEeecCcCCChhhHhcC
Q 011322 259 YQQN-GVKFVKGASIKNLEAGSDG-RVAAVKLE--DG-----STIDADTIVIGIGAKPTVSPFERVG 316 (488)
Q Consensus 259 l~~~-GV~v~~~~~v~~i~~~~~~-~v~~v~~~--~g-----~~i~~D~vi~a~G~~p~~~~~~~~g 316 (488)
.+++ ++++++++.|++|..++++ ++++|++. +| .++.++.||+|+|.-....+|..+|
T Consensus 231 a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 231 ALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp HHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHhcc
Confidence 3445 5999999999999865434 67788774 56 3688999999999865446665555
No 368
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.86 E-value=0.0084 Score=60.02 Aligned_cols=82 Identities=21% Similarity=0.125 Sum_probs=60.2
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 285 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~ 285 (488)
.+++++|||.|.+|+-+|..|.++|.+|++.+..+.-. + ...+.|++.|++++.+....++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~----~-----~~~~~L~~~gi~~~~g~~~~~~---------- 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE----N-----PTAQSLLEEGIKVVCGSHPLEL---------- 68 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG----C-----HHHHHHHHTTCEEEESCCCGGG----------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC----C-----hHHHHHHhCCCEEEECCChHHh----------
Confidence 57899999999999999999999999999998765211 1 1234678889999877431100
Q ss_pred EEeCCCcEEEcCEEEEeecCcCCChhh
Q 011322 286 VKLEDGSTIDADTIVIGIGAKPTVSPF 312 (488)
Q Consensus 286 v~~~~g~~i~~D~vi~a~G~~p~~~~~ 312 (488)
+.+ .+|.||+++|..++.+.+
T Consensus 69 --~~~----~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 69 --LDE----DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp --GGS----CEEEEEECTTSCTTSHHH
T ss_pred --hcC----CCCEEEECCcCCCCChhH
Confidence 000 179999999998887653
No 369
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.83 E-value=0.0069 Score=61.67 Aligned_cols=63 Identities=10% Similarity=0.133 Sum_probs=44.8
Q ss_pred HHHHHHHHcCcEEEcCCeEEEEEeCCCC-cEEEEEeC--CC-----cEEEcCEEEEeecCcCCChhhHhcC
Q 011322 254 RYEQLYQQNGVKFVKGASIKNLEAGSDG-RVAAVKLE--DG-----STIDADTIVIGIGAKPTVSPFERVG 316 (488)
Q Consensus 254 ~~~~~l~~~GV~v~~~~~v~~i~~~~~~-~v~~v~~~--~g-----~~i~~D~vi~a~G~~p~~~~~~~~g 316 (488)
++....+..++++++++.|++|..++++ ++++|... +| .++.++.||+|+|.-....+|..+|
T Consensus 232 ~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg 302 (507)
T 1coy_A 232 YLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMK 302 (507)
T ss_dssp HHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHhcc
Confidence 3444334446999999999999875444 67788774 55 3688999999999865446665554
No 370
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=95.79 E-value=0.019 Score=57.57 Aligned_cols=40 Identities=15% Similarity=0.336 Sum_probs=35.5
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 90 (488)
++..+||+|||+|++|+++|..|++.|. +|+++|+++...
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~---~v~~~e~~~~~G 56 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGK---KILVLDRNPYYG 56 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeccCCCC
Confidence 3456899999999999999999999987 899999998654
No 371
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.71 E-value=0.0073 Score=62.61 Aligned_cols=64 Identities=13% Similarity=0.220 Sum_probs=45.1
Q ss_pred HHHHHHHHcCcEEEcCCeEEEEEeCCC---CcEEEEEeC--CCc--EEEc-CEEEEeecCcCCChhhHhcCC
Q 011322 254 RYEQLYQQNGVKFVKGASIKNLEAGSD---GRVAAVKLE--DGS--TIDA-DTIVIGIGAKPTVSPFERVGL 317 (488)
Q Consensus 254 ~~~~~l~~~GV~v~~~~~v~~i~~~~~---~~v~~v~~~--~g~--~i~~-D~vi~a~G~~p~~~~~~~~gl 317 (488)
++....++.|+++++++.|+++..+++ +++.+|... +|+ ++.+ +.||+|+|.-....+|..+|+
T Consensus 236 ~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGI 307 (587)
T 1gpe_A 236 WLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGI 307 (587)
T ss_dssp HTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTE
T ss_pred HHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCC
Confidence 333334567999999999999975432 467777664 564 5678 899999998765566665554
No 372
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.66 E-value=0.007 Score=62.21 Aligned_cols=64 Identities=22% Similarity=0.356 Sum_probs=45.4
Q ss_pred HHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEeCC---Cc--EEEcC-EEEEeecCcCCChhhHhcCC
Q 011322 254 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TIDAD-TIVIGIGAKPTVSPFERVGL 317 (488)
Q Consensus 254 ~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i~~D-~vi~a~G~~p~~~~~~~~gl 317 (488)
++....++.|+++++++.|++|..++++++.+|.+.+ |+ ++.++ .||+|+|.-....++..+|+
T Consensus 214 ~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGi 283 (546)
T 2jbv_A 214 YIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGI 283 (546)
T ss_dssp HTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCC
Confidence 3444344679999999999999865436777887644 53 68898 99999997433356655554
No 373
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.65 E-value=0.013 Score=48.08 Aligned_cols=37 Identities=11% Similarity=0.271 Sum_probs=32.5
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
...+.+|+|+|.|.-|...|..|.+.|+ +|+++|+++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~---~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDI---PLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCH
Confidence 3456789999999999999999999987 899999764
No 374
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.52 E-value=0.016 Score=55.17 Aligned_cols=81 Identities=23% Similarity=0.243 Sum_probs=58.9
Q ss_pred cCCeEEEECCcHHHHH-HHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEE
Q 011322 206 KAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e-~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~ 284 (488)
..+++.|||.|-+|+. +|..|.++|.+|++.+..+. ++ ..+.|++.|++++.+.....
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~------~~-----~~~~L~~~gi~v~~g~~~~~---------- 61 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY------PP-----MSTQLEALGIDVYEGFDAAQ---------- 61 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC------TT-----HHHHHHHTTCEEEESCCGGG----------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC------cH-----HHHHHHhCCCEEECCCCHHH----------
Confidence 3578999999999996 88999999999999987653 11 23457788999886632100
Q ss_pred EEEeCCCcEEEcCEEEEeecCcCCChhhH
Q 011322 285 AVKLEDGSTIDADTIVIGIGAKPTVSPFE 313 (488)
Q Consensus 285 ~v~~~~g~~i~~D~vi~a~G~~p~~~~~~ 313 (488)
+.. ..+|.||+++|..|+.+.++
T Consensus 62 ---l~~---~~~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 62 ---LDE---FKADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp ---GGS---CCCSEEEECTTCCTTCHHHH
T ss_pred ---cCC---CCCCEEEECCCcCCCCHHHH
Confidence 000 14899999999998876543
No 375
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.50 E-value=0.0057 Score=62.96 Aligned_cols=67 Identities=15% Similarity=0.221 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHcCcEEEcCCeEEEEEeC---CC-CcEEEEEeCC--C-c--EEEc-CEEEEeecCcCCChhhHhcCC
Q 011322 251 LAQRYEQLYQQNGVKFVKGASIKNLEAG---SD-GRVAAVKLED--G-S--TIDA-DTIVIGIGAKPTVSPFERVGL 317 (488)
Q Consensus 251 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~---~~-~~v~~v~~~~--g-~--~i~~-D~vi~a~G~~p~~~~~~~~gl 317 (488)
...++...+++.+++|++++.|++|.-+ ++ +++++|++.+ | + ++.+ .-||+|.|.--...+|..+|+
T Consensus 210 ~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGI 286 (566)
T 3fim_B 210 STAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGI 286 (566)
T ss_dssp HHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred HHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCC
Confidence 3445555556789999999999999754 12 4666777643 4 3 4667 789999997544355555554
No 376
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.39 E-value=0.011 Score=59.87 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=31.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 244 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~ 244 (488)
|+|+|||+|..|+-+|..|++.|.+|+++++++++-.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCC
Confidence 6899999999999999999999999999999876543
No 377
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.38 E-value=0.015 Score=51.78 Aligned_cols=107 Identities=15% Similarity=0.231 Sum_probs=66.3
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 285 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~ 285 (488)
.+++++|||||.+|..-+..|.+.|.+|+++.+. +.++ +.+..++.+++++... +.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~-------~~~~----l~~l~~~~~i~~i~~~----~~--------- 85 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT-------VSAE----INEWEAKGQLRVKRKK----VG--------- 85 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS-------CCHH----HHHHHHTTSCEEECSC----CC---------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC-------CCHH----HHHHHHcCCcEEEECC----CC---------
Confidence 5799999999999999999999999999999753 2333 3344445567665331 11
Q ss_pred EEeCCCcEEEcCEEEEeecCcCCChhhHhcCCcccCCCEEeCC----CCCC-CCCCEEEEceec
Q 011322 286 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDG----QFRT-RMPGIFAIGDVA 344 (488)
Q Consensus 286 v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~----~~~t-~~~~Iya~GD~a 344 (488)
.+.--.+|+||.|||.......+... .. .++.||. .+-+ ..|-++--|++.
T Consensus 86 ----~~dL~~adLVIaAT~d~~~N~~I~~~---ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 86 ----EEDLLNVFFIVVATNDQAVNKFVKQH---IK-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp ----GGGSSSCSEEEECCCCTHHHHHHHHH---SC-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred ----HhHhCCCCEEEECCCCHHHHHHHHHH---Hh-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 11112489999999976543333222 11 3455542 1222 356666666654
No 378
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.20 E-value=0.026 Score=47.10 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=30.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
.+.+|+|+|+|..|...+..|.+.|+ +|+++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~---~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ---NVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC---CEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEECC
Confidence 35789999999999999999999887 89999975
No 379
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.07 E-value=0.054 Score=51.51 Aligned_cols=35 Identities=17% Similarity=0.119 Sum_probs=30.1
Q ss_pred CCCeEEEEcCchHHHH-HHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGY-AARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~-aA~~L~~~g~~~~~V~lie~~~ 87 (488)
.+++|.|||.|.+|++ +|..|.++|+ +|++.|..+
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~---~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGF---EVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTC---EEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCC---EEEEEcCCC
Confidence 3578999999999997 7888899988 899999764
No 380
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.02 E-value=0.028 Score=47.05 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
....+|+|+|+|.-|...|..|.+.|. +|+++++++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~---~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGH---SVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 345789999999999999999999886 899999764
No 381
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.00 E-value=0.023 Score=46.63 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=30.6
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+++|+|+|+|.-|...|..|.+.|+ +|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~---~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK---KVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---eEEEEECCH
Confidence 5689999999999999999999987 899999753
No 382
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.38 E-value=0.039 Score=43.27 Aligned_cols=33 Identities=12% Similarity=0.286 Sum_probs=29.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcC-CCCCcEEEEcCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKE 86 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g-~~~~~V~lie~~ 86 (488)
+++|+|+|+|..|...+..|.+.| + +|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~---~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNY---SVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSE---EEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCc---eEEEEeCC
Confidence 468999999999999999999987 5 79998865
No 383
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.37 E-value=0.19 Score=47.54 Aligned_cols=85 Identities=13% Similarity=0.157 Sum_probs=55.7
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEc--CCeEEEEEeCCCCcEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--GASIKNLEAGSDGRVAA 285 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~--~~~v~~i~~~~~~~v~~ 285 (488)
.+|+|||+|..|.-+|..|.+.|.+|+++.|.+ . +.+++.|+.+.. .... .+.+ + .
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~----------~-----~~i~~~Gl~~~~~~~g~~-~~~~-----~-~ 60 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD----------Y-----ETVKAKGIRIRSATLGDY-TFRP-----A-A 60 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT----------H-----HHHHHHCEEEEETTTCCE-EECC-----S-C
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh----------H-----HHHHhCCcEEeecCCCcE-EEee-----e-e
Confidence 479999999999999999999999999987753 0 335666876653 1111 1100 0 1
Q ss_pred EEeCCC-cEE-EcCEEEEeecCcCCChhhHhc
Q 011322 286 VKLEDG-STI-DADTIVIGIGAKPTVSPFERV 315 (488)
Q Consensus 286 v~~~~g-~~i-~~D~vi~a~G~~p~~~~~~~~ 315 (488)
+. .+- +.. ++|+||+|+-.....+.++..
T Consensus 61 ~~-~~~~~~~~~~DlVilavK~~~~~~~l~~l 91 (320)
T 3i83_A 61 VV-RSAAELETKPDCTLLCIKVVEGADRVGLL 91 (320)
T ss_dssp EE-SCGGGCSSCCSEEEECCCCCTTCCHHHHH
T ss_pred eE-CCHHHcCCCCCEEEEecCCCChHHHHHHH
Confidence 11 222 222 689999998877766666554
No 384
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.33 E-value=0.048 Score=44.30 Aligned_cols=32 Identities=19% Similarity=0.344 Sum_probs=29.1
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
++|+|||+|.-|...|..|.+.|+ +|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~---~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH---DIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC---eEEEEECC
Confidence 589999999999999999999886 79999865
No 385
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.08 E-value=0.064 Score=54.22 Aligned_cols=40 Identities=28% Similarity=0.370 Sum_probs=35.3
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR 245 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~ 245 (488)
..++|+|||+|.+|+.+|..|.+.|.+|+++++.+++..+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 3578999999999999999999999999999998766543
No 386
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=93.88 E-value=0.058 Score=53.23 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=32.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
++|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 36999999999999999999999999999998664
No 387
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.82 E-value=0.062 Score=47.78 Aligned_cols=36 Identities=25% Similarity=0.521 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
....++|+|||||..|...+..|.+.|. +|+|++++
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA---~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA---AITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC---CEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEECCC
Confidence 3567899999999999999999999976 89999975
No 388
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=93.54 E-value=0.044 Score=52.09 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=44.8
Q ss_pred CCeEEEECCcHHHHHHHHHHHh--CCCcEEEEecCCCCccccc------C-HHHHHHHHHHHHHcCcEEEcCCe
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVG--WKLDTTIIFPENHLLQRLF------T-PSLAQRYEQLYQQNGVKFVKGAS 271 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~--~g~~vtlv~~~~~~~~~~~------~-~~~~~~~~~~l~~~GV~v~~~~~ 271 (488)
...|+|||+|+.|+-+|..|++ .|.+|+++++.+.+-.... + ..+...+...+++.|+++..+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~ 138 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGD 138 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCc
Confidence 3579999999999999999974 5999999998765422110 0 11222344567778888876543
No 389
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.48 E-value=0.08 Score=54.87 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCC-CcEEEEEeCCCcEEEcCEEEEeecCcCC
Q 011322 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPT 308 (488)
Q Consensus 248 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~g~~i~~D~vi~a~G~~p~ 308 (488)
...+.+.+.+.++..|.++++++.|.+|..+++ +++.+|.+.+|+++.||.||......|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 457888888899999999999999999976543 7788888888999999999998776664
No 390
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.39 E-value=0.08 Score=45.47 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHc-CCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~-g~~~~~V~lie~~~ 87 (488)
....+|+|||.|.-|...|..|.+. |+ +|+++|+++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~---~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK---ISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS---CEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC---eEEEEECCH
Confidence 3456899999999999999999998 87 799999763
No 391
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.38 E-value=0.068 Score=52.97 Aligned_cols=33 Identities=21% Similarity=0.375 Sum_probs=31.3
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~ 240 (488)
++|+|||+|+.|+-+|..|++.|.+|+++++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 679999999999999999999999999999875
No 392
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.32 E-value=0.084 Score=50.68 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=31.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~ 241 (488)
..|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEG 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 4699999999999999999999999999999853
No 393
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.24 E-value=0.084 Score=52.16 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=31.5
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
+|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 5899999999999999999999999999987654
No 394
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.16 E-value=0.089 Score=42.84 Aligned_cols=34 Identities=21% Similarity=0.417 Sum_probs=30.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+++|+|+|+|..|...+..|.+.|. +|+++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~---~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH---EVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4679999999999999999999886 799998753
No 395
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.14 E-value=0.084 Score=52.95 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=32.2
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCC--cEEEEecCCCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHL 242 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~--~vtlv~~~~~~ 242 (488)
++|+|||||.+|+-+|..|++.|. +|+++++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 579999999999999999999999 99999987654
No 396
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.12 E-value=0.097 Score=52.86 Aligned_cols=78 Identities=15% Similarity=0.154 Sum_probs=57.1
Q ss_pred hcCCeEEEECCcHHHHH-HHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcE
Q 011322 205 EKAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 283 (488)
Q Consensus 205 ~~~~~vvVvG~G~~g~e-~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v 283 (488)
...+++.|||-|-+|+- +|..|.++|.+|+..+.... + ..+.|++.|++++.+.....
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~-------~-----~~~~l~~~gi~~~~g~~~~~--------- 78 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN-------S-----VTQHLTALGAQIYFHHRPEN--------- 78 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC-------H-----HHHHHHHTTCEEESSCCGGG---------
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC-------H-----HHHHHHHCCCEEECCCCHHH---------
Confidence 35689999999999996 79999999999999875431 1 22457888999987632100
Q ss_pred EEEEeCCCcEEEcCEEEEeecCcCCChhh
Q 011322 284 AAVKLEDGSTIDADTIVIGIGAKPTVSPF 312 (488)
Q Consensus 284 ~~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 312 (488)
+ ..+|.||+++|..++.+.+
T Consensus 79 ----~-----~~~d~vV~Spgi~~~~p~~ 98 (494)
T 4hv4_A 79 ----V-----LDASVVVVSTAISADNPEI 98 (494)
T ss_dssp ----G-----TTCSEEEECTTSCTTCHHH
T ss_pred ----c-----CCCCEEEECCCCCCCCHHH
Confidence 1 1389999999998876653
No 397
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.12 E-value=0.04 Score=54.87 Aligned_cols=79 Identities=18% Similarity=0.178 Sum_probs=56.6
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 285 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~ 285 (488)
.+++++|||.|.+|+..|..|.++|.+|+..+........ ..|+ .|+++..+... . . .
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~-----------~~l~-~G~~~~~g~~~---~-~------~ 61 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL-----------DKLP-EAVERHTGSLN---D-E------W 61 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTG-----------GGSC-TTSCEEESSCC---H-H------H
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchh-----------HHhh-CCCEEEECCCc---H-H------H
Confidence 4688999999999999999999999999999876532210 2345 68888766421 0 0 0
Q ss_pred EEeCCCcEEEcCEEEEeecCcCCChhhH
Q 011322 286 VKLEDGSTIDADTIVIGIGAKPTVSPFE 313 (488)
Q Consensus 286 v~~~~g~~i~~D~vi~a~G~~p~~~~~~ 313 (488)
+. .+|.||+++|..|+.+.+.
T Consensus 62 --~~-----~~d~vV~s~gi~~~~p~~~ 82 (439)
T 2x5o_A 62 --LM-----AADLIVASPGIALAHPSLS 82 (439)
T ss_dssp --HH-----TCSEEEECTTSCTTCHHHH
T ss_pred --hc-----cCCEEEeCCCCCCCCHHHH
Confidence 11 4789999999987755443
No 398
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.10 E-value=0.23 Score=40.46 Aligned_cols=77 Identities=14% Similarity=0.192 Sum_probs=51.0
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEE
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 286 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v 286 (488)
.++++|+|.|..|..+|..|.+.|.+|+++++.+ +. + +.+++.|+.++.+.. . +. .
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~---------~~---~-~~~~~~g~~~i~gd~------~-~~---~- 62 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR---------TR---V-DELRERGVRAVLGNA------A-NE---E- 62 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH---------HH---H-HHHHHTTCEEEESCT------T-SH---H-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH---------HH---H-HHHHHcCCCEEECCC------C-CH---H-
Confidence 4689999999999999999999999999998753 21 1 234556777664410 0 00 0
Q ss_pred EeCCCcEEEcCEEEEeecCcC
Q 011322 287 KLEDGSTIDADTIVIGIGAKP 307 (488)
Q Consensus 287 ~~~~g~~i~~D~vi~a~G~~p 307 (488)
.+..-..-.+|.||++++...
T Consensus 63 ~l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 63 IMQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp HHHHTTGGGCSEEEECCSCHH
T ss_pred HHHhcCcccCCEEEEECCChH
Confidence 011101136899999988654
No 399
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.04 E-value=0.33 Score=49.85 Aligned_cols=164 Identities=13% Similarity=0.064 Sum_probs=0.0
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC----------------------------------------
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA---------------------------------------- 87 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~---------------------------------------- 87 (488)
...+.+++|+|.|.-|...|..|.+.+. +++++|+++
T Consensus 124 ~~~~~hviI~G~g~~g~~la~~L~~~~~---~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t~ 200 (565)
T 4gx0_A 124 DDTRGHILIFGIDPITRTLIRKLESRNH---LFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANL 200 (565)
T ss_dssp TTCCSCEEEESCCHHHHHHHHHTTTTTC---CEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEECS
T ss_pred cccCCeEEEECCChHHHHHHHHHHHCCC---CEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEeC
Q ss_pred -----------------------------------------------------------CCCCCCCCCCccccCCCCCCC
Q 011322 88 -----------------------------------------------------------YAPYERPALTKGYLFPLDKKP 108 (488)
Q Consensus 88 -----------------------------------------------------------~~~~~~~~l~~~~~~~~~~~~ 108 (488)
....+.......+....-..+
T Consensus 201 ~D~~n~~~~~~ar~~~~~~iiar~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~p~~~~~~~~~~~~~~l~e~~v~ 280 (565)
T 4gx0_A 201 SDPDNANLCLTVRSLCQTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATTCGALAHILDSFGNLQIAELPVH 280 (565)
T ss_dssp CHHHHHHHHHHHHTTCCCCEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHHHHC----------------------
T ss_pred CcHHHHHHHHHHHHhcCceEEEEECCHHHHHHHHHcCCCEEEChHHHHHHHHHHHhcccccccchhcccCCceEEEEEEC
Q ss_pred CCCCCcccccCCCCCCCCHhHHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcE
Q 011322 109 ARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGV 188 (488)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v 188 (488)
.- ...-.-+.+.+..-..+..+..+.++++.+.-.....+...-.++-.|.... +..
T Consensus 281 -~s------------~l~G~~l~el~~~~~~~~~vi~i~r~g~~~~p~~~~~l~~GD~L~v~g~~~~-l~~--------- 337 (565)
T 4gx0_A 281 -GT------------PFAGKTIGESGIRQRTGLSIIGVWERGSLTTPQRETVLTEQSLLVLAGTKSQ-LAA--------- 337 (565)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CC------------ccCCCCHHHcCcchhcCCEEEEEEECCEEeCCCCCcEeCCCCEEEEEeCHHH-HHH---------
Q ss_pred EEecCHHHHHHHHHhhhcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCccc
Q 011322 189 HYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR 245 (488)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~ 245 (488)
...........++++|+|.|..|..+|..|.+.|.+|++++..+.....
T Consensus 338 --------~~~~~~~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~ 386 (565)
T 4gx0_A 338 --------LEYLIGEAPEDELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCN 386 (565)
T ss_dssp -----------------CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC
T ss_pred --------HHHHhcCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhh
No 400
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.01 E-value=0.11 Score=51.18 Aligned_cols=61 Identities=18% Similarity=0.250 Sum_probs=45.3
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCC-CcEEEEecCCCCcccc----------------cCHHHHHHHHHHHHHcCcEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHLLQRL----------------FTPSLAQRYEQLYQQNGVKFV 267 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g-~~vtlv~~~~~~~~~~----------------~~~~~~~~~~~~l~~~GV~v~ 267 (488)
...+|+|||+|..|+-+|..|++.| .+|+++++.+++-.+. +.+ ....+.+.+++.|+++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~-~~~~~~~l~~~~g~~~~ 82 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVP-SYDTIQEIMDRTGDKVD 82 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCT-TCHHHHHHHHHHCCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecC-CcHHHHHHHHHhCCccc
Confidence 3568999999999999999999999 8999999887653211 111 12346677788887653
No 401
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.95 E-value=0.12 Score=50.07 Aligned_cols=37 Identities=24% Similarity=0.402 Sum_probs=33.3
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecC-CCC
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE-NHL 242 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~-~~~ 242 (488)
...+|+|||+|..|+-+|..|.+.|.+|+++++. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3568999999999999999999999999999988 554
No 402
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.93 E-value=0.12 Score=50.13 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=30.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~ 240 (488)
++|+|||+|..|++.|..+++.|.+|+++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999764
No 403
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=92.84 E-value=0.11 Score=52.87 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCC-CcEEEEecCCCC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHL 242 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g-~~vtlv~~~~~~ 242 (488)
..+|+|||+|..|+-+|..|.+.| .+|+++++++++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 357999999999999999999999 999999987654
No 404
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.83 E-value=0.12 Score=48.36 Aligned_cols=39 Identities=15% Similarity=0.239 Sum_probs=32.0
Q ss_pred ccCCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 46 SFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 46 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+|.+.+++|.|||+|.-|...|..|++.|+ +|+++|.++
T Consensus 10 ~~~~~~~~I~VIG~G~mG~~iA~~la~~G~---~V~~~d~~~ 48 (302)
T 1f0y_A 10 AKKIIVKHVTVIGGGLMGAGIAQVAAATGH---TVVLVDQTE 48 (302)
T ss_dssp --CCCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 333445789999999999999999999987 899999764
No 405
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=92.62 E-value=0.11 Score=51.10 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=31.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~ 240 (488)
.+|+|||||+.|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 406
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=92.54 E-value=0.12 Score=52.43 Aligned_cols=61 Identities=28% Similarity=0.366 Sum_probs=46.2
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccc-----------------cCHHHHHHHHHHHHHcCcEEEc
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-----------------FTPSLAQRYEQLYQQNGVKFVK 268 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~GV~v~~ 268 (488)
..+|+|||+|..|+-+|..|++.|.+|+++++++++-.+. +... ...+.+.+++.|++...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~~~ 81 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-QNRILRLAKELGLETYK 81 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-CHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-cHHHHHHHHHcCCccee
Confidence 3579999999999999999999999999999987663321 1111 34566778888887643
No 407
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.52 E-value=0.096 Score=52.05 Aligned_cols=130 Identities=15% Similarity=0.168 Sum_probs=74.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHhH
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (488)
..++|+|||.|.+|+++|..|.++|+ +|++.|.....+.. .+
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~---~v~~~D~~~~~~~~-----------------------------------~~ 45 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGV---TPRVMDTRMTPPGL-----------------------------------DK 45 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTC---CCEEEESSSSCTTG-----------------------------------GG
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCC---EEEEEECCCCcchh-----------------------------------HH
Confidence 34689999999999999999999988 89999976542100 11
Q ss_pred HHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCCe
Q 011322 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKK 209 (488)
Q Consensus 130 ~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 209 (488)
++ .|+++..+... .+. + . .+|.+|+++|..+. .|.+......++..+.. .+.+... ...+.
T Consensus 46 l~-~G~~~~~g~~~----~~~--~--~-----~~d~vV~s~gi~~~-~p~~~~a~~~~~~v~~~---~~~~~~~-~~~~v 106 (439)
T 2x5o_A 46 LP-EAVERHTGSLN----DEW--L--M-----AADLIVASPGIALA-HPSLSAAADAGIEIVGD---IELFCRE-AQAPI 106 (439)
T ss_dssp SC-TTSCEEESSCC----HHH--H--H-----TCSEEEECTTSCTT-CHHHHHHHHTTCEEECH---HHHHHHH-CCSCE
T ss_pred hh-CCCEEEECCCc----HHH--h--c-----cCCEEEeCCCCCCC-CHHHHHHHHCCCcEEEH---HHHHHHh-cCCCE
Confidence 13 46666554311 000 0 0 36889999986543 23221111123344432 2222222 23456
Q ss_pred EEEECC---cHHHHHHHHHHHhCCCcEEEE
Q 011322 210 VVVVGG---GYIGMEVAAAAVGWKLDTTII 236 (488)
Q Consensus 210 vvVvG~---G~~g~e~A~~l~~~g~~vtlv 236 (488)
|.|-|+ +-+..-++..|...|.++.+.
T Consensus 107 I~VTGTnGKTTT~~ml~~iL~~~g~~~~~~ 136 (439)
T 2x5o_A 107 VAITGSNGKSTVTTLVGEMAKAAGVNVGVG 136 (439)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 666665 334455666777788776544
No 408
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.52 E-value=0.12 Score=50.18 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=30.7
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~ 241 (488)
+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 699999999999999999999999999998753
No 409
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.50 E-value=0.068 Score=49.15 Aligned_cols=36 Identities=19% Similarity=0.443 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
...++|+|||||-.|...+..|.+.|. +|+||+++.
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga---~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGC---KLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTC---EEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCC---EEEEEcCCC
Confidence 456899999999999999999999986 899999764
No 410
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.46 E-value=0.32 Score=45.92 Aligned_cols=88 Identities=17% Similarity=0.248 Sum_probs=52.6
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 285 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~ 285 (488)
...+|.|||+|..|.-+|..|++.|.+|+++ +++ +. .+.+++.|+.+.... . .+.. .+ .
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~---------~~----~~~i~~~g~~~~~~~-~-~~~~----~~-~ 76 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP---------QH----VQAIEATGLRLETQS-F-DEQV----KV-S 76 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH---------HH----HHHHHHHCEEEECSS-C-EEEE----CC-E
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH---------hH----HHHHHhCCeEEEcCC-C-cEEE----ee-e
Confidence 5678999999999999999999999999988 432 11 133455677665321 1 1110 00 1
Q ss_pred EEeCCCcE-EEcCEEEEeecCcCCChhhHhc
Q 011322 286 VKLEDGST-IDADTIVIGIGAKPTVSPFERV 315 (488)
Q Consensus 286 v~~~~g~~-i~~D~vi~a~G~~p~~~~~~~~ 315 (488)
+. .+-+. -++|+||+|+......+.++..
T Consensus 77 ~~-~~~~~~~~~D~vilavk~~~~~~~l~~l 106 (318)
T 3hwr_A 77 AS-SDPSAVQGADLVLFCVKSTDTQSAALAM 106 (318)
T ss_dssp EE-SCGGGGTTCSEEEECCCGGGHHHHHHHH
T ss_pred ee-CCHHHcCCCCEEEEEcccccHHHHHHHH
Confidence 11 22121 2589999998765433344443
No 411
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.46 E-value=0.13 Score=51.50 Aligned_cols=38 Identities=29% Similarity=0.407 Sum_probs=32.6
Q ss_pred hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
....+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 34578999999999999999999999999999988654
No 412
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.35 E-value=0.14 Score=51.52 Aligned_cols=39 Identities=23% Similarity=0.213 Sum_probs=34.4
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcc
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 244 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~ 244 (488)
...+|+|||+|..|+-+|..|.+.|.+|+++++.+++-.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 456899999999999999999999999999998876443
No 413
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=92.34 E-value=0.27 Score=49.55 Aligned_cols=36 Identities=17% Similarity=0.369 Sum_probs=33.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 89 (488)
.+||+|||||++||+||..|++.|+ +|+|+|+++..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~---~v~v~E~~~~~ 74 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGF---KTLLLEARDRI 74 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTC---CEEEECSSSBS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 3799999999999999999999987 89999998765
No 414
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.33 E-value=0.15 Score=49.12 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=33.0
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 90 (488)
|++|+|||||..|..+++.+++.|+ +++++|.++..+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~---~vv~vd~~~~~~ 37 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGM---KVVLVDKNPQAL 37 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCTTCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCCCCh
Confidence 5789999999999999999999998 899999876543
No 415
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.29 E-value=0.13 Score=51.28 Aligned_cols=134 Identities=13% Similarity=0.170 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCcccccCCCCCCCCHh
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (488)
...++|+|||.|.+|+++|..|+++|+ +|++.|..+.. . ....+
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~---~V~~~D~~~~~---~------------------------------~~~~~ 50 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA---IVTVNDGKPFD---E------------------------------NPTAQ 50 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC---EEEEEESSCGG---G------------------------------CHHHH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC---EEEEEeCCccc---C------------------------------ChHHH
Confidence 346899999999999999999999998 89999976420 0 01234
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCcEEEeCCCcEEEeccEEecCCCCCCcCCCCcCCCCCcEEEecCHHHHHHHHHhhhcCC
Q 011322 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208 (488)
Q Consensus 129 ~~~~~~v~~~~~~~v~~id~~~~~v~~~~g~~i~yd~lVlAtG~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 208 (488)
.+++.|+++..+.. ++.. + ++ .+|.+|+++|..+. .|........++..+.. .+-+.. +...+
T Consensus 51 ~L~~~gi~~~~g~~-----~~~~---~-~~---~~d~vv~spgi~~~-~p~~~~a~~~gi~v~~~---~e~~~~-~~~~~ 113 (451)
T 3lk7_A 51 SLLEEGIKVVCGSH-----PLEL---L-DE---DFCYMIKNPGIPYN-NPMVKKALEKQIPVLTE---VELAYL-VSESQ 113 (451)
T ss_dssp HHHHTTCEEEESCC-----CGGG---G-GS---CEEEEEECTTSCTT-SHHHHHHHHTTCCEECH---HHHHHH-HCCSE
T ss_pred HHHhCCCEEEECCC-----hHHh---h-cC---CCCEEEECCcCCCC-ChhHHHHHHCCCcEEeH---HHHHHH-hcCCC
Confidence 56778999887643 1100 0 00 27999999997553 22211111123333332 222222 22344
Q ss_pred eEEEECC-c--HHHHHHHHHHHhCCCcEEE
Q 011322 209 KVVVVGG-G--YIGMEVAAAAVGWKLDTTI 235 (488)
Q Consensus 209 ~vvVvG~-G--~~g~e~A~~l~~~g~~vtl 235 (488)
.|.|-|+ | -+..-++..|...|.++.+
T Consensus 114 ~IaVTGTnGKTTTt~ml~~iL~~~g~~~~~ 143 (451)
T 3lk7_A 114 LIGITGSNGKTTTTTMIAEVLNAGGQRGLL 143 (451)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 4555564 2 2334456667777776643
No 416
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.26 E-value=0.14 Score=49.35 Aligned_cols=33 Identities=30% Similarity=0.435 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~ 239 (488)
...|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 357999999999999999999999999999975
No 417
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.22 E-value=0.12 Score=49.96 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=31.9
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
..++|+|||+|.+|+-+|..|+ .|.+|+++++.+.+
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 3578999999999999999999 59999999988644
No 418
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.18 E-value=0.11 Score=45.95 Aligned_cols=32 Identities=28% Similarity=0.580 Sum_probs=29.2
Q ss_pred eEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 53 ~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+|+|+|+|.-|...|..|.+.|+ +|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~---~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY---GVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 69999999999999999999887 899999763
No 419
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.03 E-value=0.39 Score=38.96 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=30.3
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~ 239 (488)
.++++|+|+|..|..+|..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999999999999999999999999764
No 420
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.99 E-value=0.21 Score=41.47 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=33.1
Q ss_pred hcCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCC
Q 011322 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (488)
Q Consensus 205 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~ 241 (488)
..+++++|+|+|.+|..++..|.+.|.+|+++.+.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4678999999999999999999999999999987653
No 421
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=91.93 E-value=0.27 Score=49.03 Aligned_cols=38 Identities=11% Similarity=0.209 Sum_probs=34.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 90 (488)
..+||||||||++|++||..|++.|+ +|+|+|+++...
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~---~V~vlE~~~~~G 47 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGK---KVLHIDKQDHYG 47 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCCCCC
Confidence 45899999999999999999999988 899999998754
No 422
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=91.88 E-value=0.47 Score=49.16 Aligned_cols=39 Identities=18% Similarity=0.321 Sum_probs=35.4
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 90 (488)
.+++||+|||+|..|...|..|++.|. +|.+||++++..
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~---~vl~id~~~~~g 44 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQ---RVLHVDSRSYYG 44 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCC---EEEEEcCCCccc
Confidence 346999999999999999999999987 899999999764
No 423
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=91.88 E-value=0.19 Score=51.08 Aligned_cols=80 Identities=20% Similarity=0.136 Sum_probs=57.4
Q ss_pred hcCCeEEEECCcHHHHH-HHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcE
Q 011322 205 EKAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 283 (488)
Q Consensus 205 ~~~~~vvVvG~G~~g~e-~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v 283 (488)
...+++.+||-|-+|+- +|..|.++|.+|+..+.... ++ ..+.|++.|++++.+.....+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~------~~-----~~~~L~~~gi~~~~G~~~~~~-------- 77 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY------PP-----MSTQLEQAGVTIEEGYLIAHL-------- 77 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------TT-----HHHHHHHTTCEEEESCCGGGG--------
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC------cH-----HHHHHHHCCCEEECCCCHHHc--------
Confidence 46799999999999997 68888999999999887542 11 234577889998766321100
Q ss_pred EEEEeCCCcEEEcCEEEEeecCcCCChhh
Q 011322 284 AAVKLEDGSTIDADTIVIGIGAKPTVSPF 312 (488)
Q Consensus 284 ~~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 312 (488)
.-.+|.||+++|..++.+.+
T Consensus 78 ---------~~~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 78 ---------QPAPDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp ---------CSCCSEEEECTTCCTTSHHH
T ss_pred ---------CCCCCEEEECCCcCCCCHHH
Confidence 02479999999998876653
No 424
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=91.81 E-value=0.19 Score=48.96 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=32.6
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 243 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~ 243 (488)
.+++|||+|.+|+-+|..|.+.|.+|+++++.+++-
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 479999999999999999999999999999887653
No 425
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.79 E-value=0.28 Score=46.14 Aligned_cols=85 Identities=16% Similarity=0.158 Sum_probs=53.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 287 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~ 287 (488)
.+++|||+|..|.-+|..|.+.|.+|+++.|.+ . +.+++.|+.+.....-..+.+ + .+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~-------------~~i~~~g~~~~~~~g~~~~~~-----~-~~~ 61 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--Y-------------EAIAGNGLKVFSINGDFTLPH-----V-KGY 61 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--H-------------HHHHHTCEEEEETTCCEEESC-----C-CEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--H-------------HHHHhCCCEEEcCCCeEEEee-----c-eee
Confidence 479999999999999999999999999987642 0 335667877653210001100 0 111
Q ss_pred eCCCc-EEEcCEEEEeecCcCCChhhHh
Q 011322 288 LEDGS-TIDADTIVIGIGAKPTVSPFER 314 (488)
Q Consensus 288 ~~~g~-~i~~D~vi~a~G~~p~~~~~~~ 314 (488)
.+-+ .-++|+||+|+-.....+.++.
T Consensus 62 -~~~~~~~~~D~vilavk~~~~~~~l~~ 88 (312)
T 3hn2_A 62 -RAPEEIGPMDLVLVGLKTFANSRYEEL 88 (312)
T ss_dssp -SCHHHHCCCSEEEECCCGGGGGGHHHH
T ss_pred -cCHHHcCCCCEEEEecCCCCcHHHHHH
Confidence 1211 1268999999876655454444
No 426
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.53 E-value=0.19 Score=50.79 Aligned_cols=38 Identities=29% Similarity=0.330 Sum_probs=34.0
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 243 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~ 243 (488)
...+|+|||+|..|+-+|..|.+.|.+|+++++.+++-
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 35789999999999999999999999999999987754
No 427
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=91.48 E-value=0.2 Score=49.77 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=32.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
.+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 47999999999999999999999999999987654
No 428
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=91.45 E-value=0.2 Score=48.85 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=32.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 243 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~ 243 (488)
..+++|||+|.+|+-+|..|++.|.+|+++++.+++-
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 3479999999999999999999999999999886543
No 429
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.31 E-value=0.21 Score=49.38 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-cEEEEecCCC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH 241 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~-~vtlv~~~~~ 241 (488)
...|+|||+|..|+-+|..|++.|. +|+++++.+.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 3579999999999999999999999 9999998764
No 430
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.27 E-value=0.21 Score=48.10 Aligned_cols=37 Identities=24% Similarity=0.418 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
....+|||+|+|.||+.+|..|...|.+ +|+++|+..
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~--~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGAT--KVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCC--eEEEEECCC
Confidence 3467999999999999999999999863 899999874
No 431
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=91.23 E-value=0.21 Score=49.51 Aligned_cols=39 Identities=13% Similarity=0.317 Sum_probs=34.6
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 90 (488)
++.+||+|||+|++|+++|..|++.|+ +|+|+|+++...
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~---~v~~~e~~~~~g 42 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGK---KVLHMDRNPYYG 42 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEecCCCcc
Confidence 346899999999999999999999987 899999987653
No 432
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.22 E-value=0.24 Score=45.84 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=31.3
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+.++|.|||+|.-|...|..|++.|+ +|+++|.++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~---~V~l~d~~~ 37 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGF---AVTAYDINT 37 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCH
Confidence 35799999999999999999999987 899998764
No 433
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.18 E-value=0.22 Score=47.89 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=32.6
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
....+|||+|+|.+|..+|..|...|.+ +|+++|+..
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~--~I~v~Dr~G 226 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVK--NVVAVDRKG 226 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCC
Confidence 4568999999999999999999999863 899999873
No 434
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.16 E-value=0.16 Score=49.49 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=30.7
Q ss_pred CeEEEECCcHHHHHHHHHHHh-CC-CcEEEEecCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVG-WK-LDTTIIFPEN 240 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~-~g-~~vtlv~~~~ 240 (488)
.+|+|||+|..|+.+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 469999999999999999999 89 9999999875
No 435
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.11 E-value=0.23 Score=46.88 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=31.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
++.+|+|||+|..|.+.|..|...+. -.+|+++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~-~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQT-ANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC-SSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 35689999999999999999999876 45899999753
No 436
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.10 E-value=0.52 Score=44.17 Aligned_cols=72 Identities=21% Similarity=0.331 Sum_probs=0.0
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEEe
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 288 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~ 288 (488)
+++|||+|..|.-+|..|. .|.+|+++.|.+ .-.+.+++.|+.+...... ... .+..
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~-------------~~~~~l~~~G~~~~~~~~~-~~~--------~~~~ 60 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ-------------EQAAAIQSEGIRLYKGGEE-FRA--------DCSA 60 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSCH-------------HHHHHHHHHCEEEEETTEE-EEE--------CCEE
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECCH-------------HHHHHHHhCCceEecCCCe-ecc--------cccc
Q ss_pred CCCcEEEcCEEEEee
Q 011322 289 EDGSTIDADTIVIGI 303 (488)
Q Consensus 289 ~~g~~i~~D~vi~a~ 303 (488)
.....-++|+||+|+
T Consensus 61 ~~~~~~~~D~vilav 75 (307)
T 3ego_A 61 DTSINSDFDLLVVTV 75 (307)
T ss_dssp ESSCCSCCSEEEECC
T ss_pred cccccCCCCEEEEEe
No 437
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.89 E-value=0.34 Score=40.08 Aligned_cols=33 Identities=12% Similarity=0.136 Sum_probs=30.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~ 239 (488)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999875
No 438
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=90.89 E-value=0.24 Score=47.59 Aligned_cols=39 Identities=18% Similarity=0.249 Sum_probs=31.8
Q ss_pred ccCCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 46 SFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 46 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+|.+++.+|.|||+|.-|.+.|..|++.|+ +|+++++++
T Consensus 24 ~m~~~~mkI~VIGaG~mG~alA~~La~~G~---~V~l~~r~~ 62 (356)
T 3k96_A 24 AMEPFKHPIAILGAGSWGTALALVLARKGQ---KVRLWSYES 62 (356)
T ss_dssp ---CCCSCEEEECCSHHHHHHHHHHHTTTC---CEEEECSCH
T ss_pred cccccCCeEEEECccHHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 334445789999999999999999999987 799998764
No 439
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.88 E-value=0.29 Score=46.46 Aligned_cols=37 Identities=11% Similarity=0.225 Sum_probs=30.9
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
.++.+|.|||+|..|.+.|..|++.|+- +|+|+|.++
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~--~V~L~D~~~ 43 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELA--DVVLYDVVK 43 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCh
Confidence 3346899999999999999999998752 599999763
No 440
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.87 E-value=0.26 Score=47.86 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=30.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
..+|+|||+|.+|+.+|..++..|. +|+++|..+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGA---VVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 5799999999999999999999986 899999764
No 441
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=90.84 E-value=0.2 Score=48.95 Aligned_cols=36 Identities=19% Similarity=0.388 Sum_probs=32.5
Q ss_pred CCeEEEECCcHHHHHHHHHHHhC-CCcEEEEecCCCC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHL 242 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~-g~~vtlv~~~~~~ 242 (488)
..+++|||+|..|+-+|..|++. |.+|+++++++++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 45799999999999999999998 9999999988654
No 442
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.82 E-value=0.28 Score=46.16 Aligned_cols=37 Identities=11% Similarity=0.270 Sum_probs=31.9
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
+++.++|.|||+|..|.+.|..|++.++ .+|+++|..
T Consensus 5 ~~~~~kv~ViGaG~vG~~ia~~l~~~g~--~~v~l~D~~ 41 (315)
T 3tl2_A 5 TIKRKKVSVIGAGFTGATTAFLLAQKEL--ADVVLVDIP 41 (315)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCG
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEecc
Confidence 3456799999999999999999999876 489999965
No 443
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.75 E-value=0.23 Score=52.34 Aligned_cols=35 Identities=14% Similarity=0.300 Sum_probs=31.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
..|+|||||..|+-+|..|++.|.+|+++++.+.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 57999999999999999999999999999986433
No 444
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.71 E-value=0.23 Score=52.46 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=31.8
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
..|+|||||..|+-+|..|++.|.+|+++++.+.+
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 57999999999999999999999999999986543
No 445
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.69 E-value=0.3 Score=46.20 Aligned_cols=37 Identities=14% Similarity=0.367 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
....+|.|||+|..|.+.|..|++.+. -.+++++|..
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~-~~~l~l~D~~ 39 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGI-TDELVVIDVN 39 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-CceEEEEecc
Confidence 345789999999999999999999886 4589999864
No 446
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=90.69 E-value=0.17 Score=48.44 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=29.5
Q ss_pred eEEEECCcHHHHHHHHHHHhCC------CcEEEEecCC
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWK------LDTTIIFPEN 240 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g------~~vtlv~~~~ 240 (488)
.|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999997 8999999874
No 447
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.68 E-value=0.3 Score=45.77 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=29.0
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~ 239 (488)
.+|.|||+|..|.-+|..|.+.|.+|+++.|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999999999988764
No 448
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.65 E-value=0.25 Score=44.79 Aligned_cols=36 Identities=22% Similarity=0.401 Sum_probs=32.1
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
..+|+|||+|-.|..+|..|.+.|. ++|+|+|.+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv--~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV--GNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC--SEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC--CeEEEEcCCCc
Confidence 5789999999999999999999986 38999998753
No 449
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.43 E-value=0.33 Score=48.38 Aligned_cols=78 Identities=13% Similarity=0.170 Sum_probs=53.0
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEE
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 285 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~ 285 (488)
.+++++|||+|.+|...+..|.+.|.+|+++.+. +.++ +.+..++.+++++.+.. .
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~-------~~~~----~~~l~~~~~i~~~~~~~----~--------- 66 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT-------FIPQ----FTVWANEGMLTLVEGPF----D--------- 66 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS-------CCHH----HHHHHTTTSCEEEESSC----C---------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC-------CCHH----HHHHHhcCCEEEEECCC----C---------
Confidence 5789999999999999999999999999999753 2232 23333335666654321 1
Q ss_pred EEeCCCcEEEcCEEEEeecCcC-CChh
Q 011322 286 VKLEDGSTIDADTIVIGIGAKP-TVSP 311 (488)
Q Consensus 286 v~~~~g~~i~~D~vi~a~G~~p-~~~~ 311 (488)
.+.--.+|+||.+||... |..+
T Consensus 67 ----~~~l~~~~lVi~at~~~~~n~~i 89 (457)
T 1pjq_A 67 ----ETLLDSCWLAIAATDDDTVNQRV 89 (457)
T ss_dssp ----GGGGTTCSEEEECCSCHHHHHHH
T ss_pred ----ccccCCccEEEEcCCCHHHHHHH
Confidence 111114899999999873 4443
No 450
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=90.40 E-value=0.28 Score=50.28 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHHHHh---CCCcEEEEecCC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPEN 240 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~---~g~~vtlv~~~~ 240 (488)
..+|+|||||..|+-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 5689999999999999999999 999999999864
No 451
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=90.38 E-value=0.25 Score=47.65 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=31.1
Q ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 209 ~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
+++|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 5899999999999999999999999999987654
No 452
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.21 E-value=0.3 Score=46.18 Aligned_cols=33 Identities=15% Similarity=0.421 Sum_probs=29.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
+++|.|||+|.-|.+.|..|.+.|. +|++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGH---CVSVVSRS 34 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTC---EEEEECST
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC---eEEEEeCC
Confidence 3689999999999999999999886 89999875
No 453
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.20 E-value=0.23 Score=49.69 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=31.1
Q ss_pred CeEEEECCcHHHHHHHHHHHhCC--CcEEEEecCCC
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENH 241 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g--~~vtlv~~~~~ 241 (488)
.+|+|||+|.+|+-+|..|.+.| .+|+++++.++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 57999999999999999999999 99999998644
No 454
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.15 E-value=0.28 Score=47.22 Aligned_cols=35 Identities=17% Similarity=0.070 Sum_probs=31.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
...+|+|||+|..|+.+|..++..|. +|+++|+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA---KTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 35799999999999999999999986 799998764
No 455
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.02 E-value=0.36 Score=45.56 Aligned_cols=37 Identities=19% Similarity=0.366 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
+++.+|+|||+|..|.+.|..|...+. -.++.++|.+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~-~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSI-VDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCS-CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 345799999999999999999998875 4589999854
No 456
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=89.92 E-value=0.34 Score=50.81 Aligned_cols=37 Identities=24% Similarity=0.520 Sum_probs=33.4
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
..++|+|||+|..|+.+|..|.+.|.+|+++++.+++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4578999999999999999999999999999987654
No 457
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.87 E-value=0.41 Score=45.59 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=30.9
Q ss_pred CCCeEEEEcC-chHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 50 ENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 50 ~~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
.+.+|+|||+ |..|.++|..+...|. ..+|+++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 4578999997 9999999999999886 4489999964
No 458
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.77 E-value=0.39 Score=45.33 Aligned_cols=38 Identities=11% Similarity=0.187 Sum_probs=31.5
Q ss_pred CCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
.|++.+|.|||+|..|.+.|..|...+. . +|+++|..+
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~-~-~v~L~Di~~ 41 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKEL-G-DVVLFDIAE 41 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTC-C-EEEEECSSS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCC-C-eEEEEeCCc
Confidence 3456799999999999999999999886 3 899999654
No 459
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=89.63 E-value=0.37 Score=51.92 Aligned_cols=36 Identities=22% Similarity=0.505 Sum_probs=32.7
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~ 242 (488)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 468999999999999999999999999999987654
No 460
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.58 E-value=0.64 Score=44.15 Aligned_cols=77 Identities=16% Similarity=0.247 Sum_probs=49.4
Q ss_pred CeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCcccccCHHHHHHHHHHHHHcCcEEEcCCeEEEEEeCCCCcEEEEE
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 287 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~ 287 (488)
.+|.|||+|..|.-+|..|.+.|.+|+++.|.+ . .+.+++.|+.+..... . .... + .+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~-------------~-~~~~~~~g~~~~~~~~-~-~~~~----~-~~~ 62 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARGA-------------T-LQALQTAGLRLTEDGA-T-HTLP----V-RAT 62 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH-------------H-HHHHHHTCEEEEETTE-E-EEEC----C-EEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH-------------H-HHHHHHCCCEEecCCC-e-EEEe----e-eEE
Confidence 579999999999999999999999999986531 1 1345677877653211 1 1100 0 111
Q ss_pred eCCCc-EEEcCEEEEeecCc
Q 011322 288 LEDGS-TIDADTIVIGIGAK 306 (488)
Q Consensus 288 ~~~g~-~i~~D~vi~a~G~~ 306 (488)
.+-+ .-++|+||+|+...
T Consensus 63 -~~~~~~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 63 -HDAAALGEQDVVIVAVKAP 81 (335)
T ss_dssp -SCHHHHCCCSEEEECCCHH
T ss_pred -CCHHHcCCCCEEEEeCCch
Confidence 1211 13589999997654
No 461
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.34 E-value=0.37 Score=46.13 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=29.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
+.+|.|||+|.-|...|..|.+.|+ +|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~---~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ---SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC---EEEEEeCC
Confidence 4689999999999999999999886 79998865
No 462
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.33 E-value=0.48 Score=38.08 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=29.2
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~ 239 (488)
..+++|+|+|.+|..++..|.+.|.+|+++.+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 357999999999999999999999999998764
No 463
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.28 E-value=0.43 Score=43.99 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=30.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+++|+|.|+|+-|...+..|.+.|+ +|+++++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~---~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGH---EVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 4689999999999999999999987 899998764
No 464
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.14 E-value=0.33 Score=45.63 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=28.5
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
++|.|||+|.-|.+.|..|.+.|. +|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE---DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC---CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC---eEEEEEcC
Confidence 589999999999999999999886 79999865
No 465
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=89.12 E-value=0.26 Score=48.86 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=29.5
Q ss_pred CeEEEECCcHHHHHHHHHHHhCC-CcEEEEec
Q 011322 208 KKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFP 238 (488)
Q Consensus 208 ~~vvVvG~G~~g~e~A~~l~~~g-~~vtlv~~ 238 (488)
..|+|||+|..|+-+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 466
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.11 E-value=0.29 Score=43.43 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=29.6
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEE-EcCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCI-VSKE 86 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~l-ie~~ 86 (488)
+++.+|.|||+|.-|.+.|..|.+.|+ +|++ ++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~---~V~~v~~r~ 56 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQI---PAIIANSRG 56 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTC---CEEEECTTC
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCC---EEEEEECCC
Confidence 345689999999999999999999887 7888 6654
No 467
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.08 E-value=0.42 Score=45.46 Aligned_cols=33 Identities=21% Similarity=0.445 Sum_probs=29.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
+++|.|||+|.-|...|..|.+.|+ +|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~---~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE---AINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC---CEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC---EEEEEECh
Confidence 4689999999999999999999987 79998853
No 468
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=89.02 E-value=0.46 Score=47.74 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=33.0
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCC-CcEEEEecCCCC
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHL 242 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g-~~vtlv~~~~~~ 242 (488)
...+++|||+|..|+-+|..|.+.| .+|+++++.+++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 3468999999999999999999998 799999988655
No 469
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.98 E-value=0.4 Score=44.88 Aligned_cols=32 Identities=13% Similarity=0.232 Sum_probs=29.0
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
.+|.|||+|.-|...|..|.+.|+ +|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN---DVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC---cEEEEECC
Confidence 589999999999999999999887 89998865
No 470
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.96 E-value=0.46 Score=44.97 Aligned_cols=37 Identities=19% Similarity=0.534 Sum_probs=33.1
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
...+|+|||+|-.|-.+|..|++.|. ++++|+|.+..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGV--g~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGV--RKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCC--CEEEEecCCEe
Confidence 46799999999999999999999997 49999998754
No 471
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.66 E-value=0.54 Score=44.29 Aligned_cols=36 Identities=11% Similarity=0.362 Sum_probs=31.0
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
+..+|.|||+|..|.+.|..|+..+. ..+|+++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~-~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGI-ADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 35699999999999999999998875 4589999965
No 472
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.65 E-value=0.43 Score=37.00 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=29.4
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCC-CcEEEEecC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPE 239 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g-~~vtlv~~~ 239 (488)
.++++|+|+|.+|..++..|.+.| .+|+++.+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 788888764
No 473
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=88.61 E-value=0.43 Score=43.29 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=32.7
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
...+|+|||+|-.|..+|..|++.|.. +++|+|.+..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg--~i~lvD~d~v 63 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVG--TLVLADDDDV 63 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCS--EEEEECCCBC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCC--eEEEEeCCCc
Confidence 367999999999999999999999973 8999998754
No 474
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.46 E-value=0.39 Score=47.82 Aligned_cols=36 Identities=36% Similarity=0.565 Sum_probs=32.1
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
.+.++|+|||||..|...+..|.+.|. +|++++++.
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga---~V~vi~~~~ 45 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGA---RLTVNALTF 45 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTB---EEEEEESSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC---EEEEEcCCC
Confidence 346899999999999999999999886 899999864
No 475
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=88.40 E-value=0.36 Score=47.46 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=29.9
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
...+|.|||.|.-|+..|..|++ |+ +|+++|.++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~---~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NH---EVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TS---EEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CC---eEEEEecCH
Confidence 44689999999999999999998 87 899999764
No 476
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.35 E-value=0.42 Score=44.31 Aligned_cols=37 Identities=22% Similarity=0.387 Sum_probs=32.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
...+|+|||+|-.|-.+|..|++.|. ++++|+|.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGV--G~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGI--GKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTC--SEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCC--CEEEEECCCcc
Confidence 45799999999999999999999996 48999997754
No 477
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.34 E-value=0.55 Score=37.90 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=29.9
Q ss_pred CCeEEEECCcHHHHHHHHHHHhCCCcEEEEecC
Q 011322 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (488)
Q Consensus 207 ~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~ 239 (488)
.++++|+|+|.+|..++..|.+.|.+|+++.+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 568999999999999999999999999988764
No 478
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.28 E-value=0.48 Score=46.27 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=30.4
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
..+|+|||+|.+|+.++..++..|. +|+++|..+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGA---IVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 5789999999999999999999886 799998764
No 479
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.22 E-value=0.62 Score=43.94 Aligned_cols=37 Identities=16% Similarity=0.303 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
|++.+|.|||+|..|.+.|..|+..+. . +++++|..+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~-~-~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQL-G-DVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-C-EEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-c-eEEEEeCCh
Confidence 445799999999999999999999876 3 899999764
No 480
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.21 E-value=0.54 Score=44.23 Aligned_cols=36 Identities=11% Similarity=0.275 Sum_probs=30.5
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+.+|+|||+|..|...|..|.+.|. ..+|+++|.++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~-~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGI-AREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 3589999999999999999999875 34799998753
No 481
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.94 E-value=0.35 Score=44.36 Aligned_cols=34 Identities=24% Similarity=0.492 Sum_probs=31.6
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecC
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~ 239 (488)
.+++|+|||+|.+|...+..|.+.|.+|+++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5789999999999999999999999999999764
No 482
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.89 E-value=0.43 Score=46.81 Aligned_cols=34 Identities=15% Similarity=0.415 Sum_probs=30.8
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+.+|+|||.|.-|...|..|.+.|+ +|++||.++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~---~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV---KMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC---CEEEEECCH
Confidence 4579999999999999999999987 799999774
No 483
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.89 E-value=0.61 Score=43.79 Aligned_cols=34 Identities=9% Similarity=0.219 Sum_probs=29.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
...+|.|||+|.-|...|..|.+.|+ +|++++++
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g~---~V~~~~~~ 62 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMGH---TVTVWNRT 62 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTC---CEEEECSS
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCCC---EEEEEeCC
Confidence 34689999999999999999999886 79988765
No 484
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.87 E-value=0.43 Score=43.94 Aligned_cols=33 Identities=21% Similarity=0.346 Sum_probs=29.5
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
+++|+|.|+|+-|...+..|.+.|+ +|+.+.+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~---~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW---RIIGTSRN 37 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC---EEEEEESC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC---EEEEEEcC
Confidence 4689999999999999999999987 79988764
No 485
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.83 E-value=0.47 Score=44.70 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=30.5
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
..++|.|||+|.-|...|..|++.|+ +|+++|.++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~---~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 45789999999999999999999988 799999764
No 486
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.73 E-value=0.6 Score=45.33 Aligned_cols=35 Identities=20% Similarity=0.113 Sum_probs=30.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
...+|+|||+|.+|+.++..++..|. +|+++|..+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA---VVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 46799999999999999999999886 799998664
No 487
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.70 E-value=0.5 Score=44.45 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=30.6
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
...+|.|||+|.-|...|..++..|+ +|+|+|.++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~---~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 35689999999999999999999998 899999765
No 488
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.66 E-value=0.44 Score=44.33 Aligned_cols=33 Identities=12% Similarity=0.186 Sum_probs=29.3
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
+++|.|||+|.-|.+.|..|.+.|. +|++++++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~---~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLP---HTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCT---TCEEEESS
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCC---eEEEEEec
Confidence 3589999999999999999999986 79999876
No 489
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.58 E-value=0.7 Score=42.69 Aligned_cols=33 Identities=15% Similarity=0.320 Sum_probs=29.2
Q ss_pred CCeEEEEcC-chHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 51 NREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 51 ~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
+.+|.|||+ |.-|...|..|.+.|+ +|+++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~---~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAH---HLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSS---EEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECC
Confidence 468999999 9999999999999886 79888754
No 490
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=87.57 E-value=0.62 Score=45.21 Aligned_cols=40 Identities=15% Similarity=0.219 Sum_probs=34.0
Q ss_pred ccCCCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011322 46 SFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (488)
Q Consensus 46 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 88 (488)
||.+++++|+|+|+|..|...+..+++.|+ ++.+++..+.
T Consensus 6 pm~~~~~~ili~g~g~~~~~~~~a~~~~G~---~v~~~~~~~~ 45 (391)
T 1kjq_A 6 ALRPAATRVMLLGSGELGKEVAIECQRLGV---EVIAVDRYAD 45 (391)
T ss_dssp TTSTTCCEEEEESCSHHHHHHHHHHHTTTC---EEEEEESSTT
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEECCCC
Confidence 445567899999999999999999999987 7999987654
No 491
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.56 E-value=0.51 Score=44.38 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=32.3
Q ss_pred cCCeEEEECCcHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 011322 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 243 (488)
Q Consensus 206 ~~~~vvVvG~G~~g~e~A~~l~~~g~~vtlv~~~~~~~ 243 (488)
..++|.|||+|..|.-+|..++..|.+|++++..+..+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l 42 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQI 42 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 35789999999999999999999999999998765433
No 492
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=87.50 E-value=0.56 Score=44.62 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=29.7
Q ss_pred CCCCeEEEEcC-chHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 49 NENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 49 ~~~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
|.+++|+|.|| |.-|...+..|.+.|+ +|+++.+.+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHR---PTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTC---CEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC---CEEEEECCC
Confidence 34568999999 9999999999999986 799988764
No 493
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.49 E-value=0.66 Score=40.68 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=29.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
..++|.|||+|.-|.+.|..|.+.|+ +|+++++++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~---~V~~~~~~~ 52 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGH---EVTYYGSKD 52 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC---EEEEECTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 35689999999999999999999886 899998664
No 494
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.35 E-value=0.59 Score=41.63 Aligned_cols=36 Identities=17% Similarity=0.313 Sum_probs=29.9
Q ss_pred CCCCCeEEEEcC-chHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 48 ANENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 48 ~~~~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
..+.++|+|.|| |.-|...+..|.+.|+ +|+++++.
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~---~V~~~~R~ 54 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGH---EPVAMVRN 54 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCC---eEEEEECC
Confidence 345679999998 9999999999999987 89998865
No 495
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.15 E-value=0.72 Score=42.16 Aligned_cols=33 Identities=18% Similarity=0.442 Sum_probs=29.9
Q ss_pred CCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
.++++|||+|-+|-+++..|.+.|. +|+|+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~---~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL---QVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCC
Confidence 6799999999999999999999984 89998765
No 496
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.11 E-value=0.82 Score=42.96 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=30.8
Q ss_pred CCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
+.++|.|||.|.-|.+.|..|++.|+ ..+|++++++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr~ 67 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDIN 67 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEECC
Confidence 35789999999999999999999987 4578888765
No 497
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.03 E-value=0.58 Score=41.28 Aligned_cols=34 Identities=15% Similarity=0.346 Sum_probs=30.1
Q ss_pred CCeEEEEcC-chHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 51 NREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 51 ~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
+++|+|.|| |.-|...+..|.+.|+ +|+++++.+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF---EVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC---EEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEEcCc
Confidence 468999996 9999999999999986 899998764
No 498
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=86.95 E-value=0.7 Score=43.23 Aligned_cols=35 Identities=26% Similarity=0.337 Sum_probs=30.2
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
++|+|||+|..|.+.|..|+..|+ ..+|+++|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~-~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGS-CSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCH
Confidence 379999999999999999999876 45799999763
No 499
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.93 E-value=0.64 Score=46.15 Aligned_cols=33 Identities=21% Similarity=0.331 Sum_probs=30.3
Q ss_pred CeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011322 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (488)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 87 (488)
++|.|||.|.-|+..|..|++.|+ +|+++|.++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~---~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA---NVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC---EEEEEECCH
Confidence 589999999999999999999987 899999764
No 500
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.91 E-value=0.78 Score=43.29 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011322 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (488)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 86 (488)
....+|.|||+|..|.+.|..|+..+. -.++.|+|..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~-~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGI-AQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-CCeEEEEeCC
Confidence 345799999999999999999999876 4589999964
Done!