Citrus Sinensis ID: 011332

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------49
MSRRPVNPARRLADGGSIPFVGSAHSKSRSSPLLSVILLAVGAVLLIGYLYSGSGKTTIEKEALSKVEGVVSCTLEVQRALPVLKKAYGDSMLKVLHVGPETCSVVSKLLKEEDTEAWGVEPYDLDDADANCRSLVRKGIVRVADIKFPLPYRAKSFSLVIVSDAVDYLSPKYLNRTLPELARVSVDGVVIFAGYPGQHRAKVSELSKFGRPAKLRSSTWWIRYFLQNSLEENEVAAKKFDQASVKRSYKPASSALTAVEYTKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGDIACDEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRDWSADTATKFFFKQDTAASSNEVGLLSR
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHcccccccccccccccccccHHHHHHHHHcEEEEEECccccccccccccEEEcccccccccHHHHHHHHHHHHHHHcccEEEccccccccccCEECcccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccHHHccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHcccccccccccccccccccccHHHHHHHHHHcccccHHHHHccccccccCEccccc
********************************LLSVILLAVGAVLLIGYLYSGSGKTTIEKEALSKVEGVVSCTLEVQRALPVLKKAYGDSMLKVLHVGPETCSVVSKLLKEEDTEAWGVEPYDLDDADANCRSLVRKGIVRVADIKFPLPYRAKSFSLVIVSDAVDYLSPKYLNRTLPELARVSVDGVVIFAGYPGQHRAKVSELSKFGRPAKLRSSTWWIRYFLQNSLEENEVAAKKFDQASVKRSYKPASSALTAVEYTKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGDIACDEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRDWSADTATKFFFKQDTAASSNEVGLLS*
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MSRRPVNPARRLADGGSIPFVGSAHSKSRSSPLLSVILLAVGAVLLIGYLYSGSGKTTIEKEALSKVEGVVSCTLEVQRALPVLKKAYGDSMLKVLHVGPETCSVVSKLLKEEDTEAWGVEPYDLDDADANCRSLVRKGIVRVADIKFPLPYRAKSFSLVIVSDAVDYLSPKYLNRTLPELARVSVDGVVIFAGYPGQHRAKVSELSKFGRPAKLRSSTWWIRYFLQNSLEENEVAAKKFDQASVKRSYKPASSALTAVEYTKNDFPPGFIFGSGTSAYQVEGAANEDGRTPSIWDTFAHAGNVLGNGDIACDEYHKYKEDVKLMAKTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELISYGIQPHVTLHHSDLPQALEDEYGGWINRMIVVANPLVYGDYPKIMKQNAGSRLPAFTDHESQQIKGSADFIGVINYYTVYIKDNPSSLKQKHRDWSADTATKFFFKQDTAASSNEVGLLSR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Uncharacterized protein At3g49720 probableQ9M2Y6

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DGA, chain A
Confidence level:very confident
Coverage over the Query: 241-450
View the alignment between query and template
View the model in PyMOL
Template: 2E9L, chain A
Confidence level:very confident
Coverage over the Query: 95-128,139-150,163-250
View the alignment between query and template
View the model in PyMOL
Template: 3JWH, chain A
Confidence level:probable
Coverage over the Query: 93-213,227-251
View the alignment between query and template
View the model in PyMOL
Template: 1E6Q, chain M
Confidence level:probable
Coverage over the Query: 273-398
View the alignment between query and template
View the model in PyMOL