Query 011333
Match_columns 488
No_of_seqs 278 out of 2102
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 05:57:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011333.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011333hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kya_A Putative phosphatase; s 99.9 3E-22 1E-26 214.6 16.4 151 83-235 310-480 (496)
2 4hw6_A Hypothetical protein, I 99.8 5.4E-20 1.8E-24 193.3 16.9 144 84-229 274-432 (433)
3 3tc9_A Hypothetical hydrolase; 99.8 4.7E-19 1.6E-23 185.7 18.8 144 83-229 270-429 (430)
4 3hrp_A Uncharacterized protein 99.8 1E-18 3.5E-23 181.5 17.6 138 84-229 267-409 (409)
5 3kya_A Putative phosphatase; s 99.7 6.1E-16 2.1E-20 165.8 16.4 132 83-231 247-411 (496)
6 3tc9_A Hypothetical hydrolase; 99.7 1.1E-15 3.8E-20 160.1 18.0 148 82-249 225-408 (430)
7 4hw6_A Hypothetical protein, I 99.7 1.3E-15 4.6E-20 159.8 17.3 148 82-248 227-410 (433)
8 3fvz_A Peptidyl-glycine alpha- 99.6 1.7E-14 6E-19 143.4 20.2 140 79-233 87-231 (329)
9 3hrp_A Uncharacterized protein 99.6 1.1E-14 3.6E-19 151.3 18.9 153 81-250 217-390 (409)
10 3fvz_A Peptidyl-glycine alpha- 99.6 4.6E-14 1.6E-18 140.3 19.1 145 80-250 21-206 (329)
11 1ijq_A LDL receptor, low-densi 99.5 1.2E-12 4.1E-17 130.8 22.1 133 82-248 76-217 (316)
12 3v64_C Agrin; beta propeller, 99.5 4.5E-13 1.5E-17 136.2 18.4 135 82-249 115-255 (349)
13 3sov_A LRP-6, low-density lipo 99.5 5.4E-13 1.9E-17 134.4 18.8 134 82-249 78-218 (318)
14 3p5b_L Low density lipoprotein 99.5 5.6E-13 1.9E-17 138.2 18.7 134 82-249 158-300 (400)
15 1npe_A Nidogen, entactin; glyc 99.5 4E-12 1.4E-16 122.2 20.8 133 82-248 78-217 (267)
16 3v64_C Agrin; beta propeller, 99.5 3.9E-12 1.3E-16 129.2 21.6 135 82-250 72-213 (349)
17 3v65_B Low-density lipoprotein 99.5 8.4E-13 2.9E-17 136.0 16.8 134 82-249 158-298 (386)
18 1npe_A Nidogen, entactin; glyc 99.4 4E-12 1.4E-16 122.1 19.2 132 84-250 37-177 (267)
19 3v65_B Low-density lipoprotein 99.4 3.5E-12 1.2E-16 131.3 19.7 135 82-250 115-256 (386)
20 1ijq_A LDL receptor, low-densi 99.4 3.4E-12 1.2E-16 127.5 18.8 134 81-248 118-258 (316)
21 3m0c_C LDL receptor, low-densi 99.4 2.2E-12 7.5E-17 145.4 19.2 134 81-248 469-611 (791)
22 3sov_A LRP-6, low-density lipo 99.4 5.5E-12 1.9E-16 127.1 19.4 132 81-248 120-258 (318)
23 1q7f_A NHL, brain tumor CG1071 99.4 8.7E-12 3E-16 119.6 19.3 136 82-250 76-217 (286)
24 3s94_A LRP-6, low-density lipo 99.4 6.6E-12 2.3E-16 137.7 19.9 135 82-250 391-532 (619)
25 3p5b_L Low density lipoprotein 99.4 9E-12 3.1E-16 129.1 19.5 139 82-251 111-257 (400)
26 1q7f_A NHL, brain tumor CG1071 99.4 1.5E-11 5E-16 118.0 19.6 141 81-250 28-174 (286)
27 1rwi_B Serine/threonine-protei 99.4 5.4E-12 1.9E-16 119.3 16.4 134 82-250 66-202 (270)
28 3m0c_C LDL receptor, low-densi 99.4 1E-11 3.5E-16 140.0 19.9 140 82-252 423-570 (791)
29 4a0p_A LRP6, LRP-6, low-densit 99.4 9.6E-12 3.3E-16 136.7 19.2 133 82-249 79-217 (628)
30 2fp8_A Strictosidine synthase; 99.4 8.3E-12 2.8E-16 123.4 16.9 134 83-250 80-239 (322)
31 1rwi_B Serine/threonine-protei 99.4 1.6E-11 5.6E-16 116.0 17.0 134 82-249 107-243 (270)
32 3s94_A LRP-6, low-density lipo 99.3 2.7E-11 9.3E-16 132.9 20.0 137 82-252 348-491 (619)
33 4a0p_A LRP6, LRP-6, low-densit 99.3 3E-11 1E-15 132.8 20.2 135 82-250 36-176 (628)
34 2qc5_A Streptogramin B lactona 99.3 8E-11 2.7E-15 111.9 19.2 135 82-250 145-282 (300)
35 1n7d_A LDL receptor, low-densi 99.3 1.6E-11 5.3E-16 136.5 14.8 135 82-250 452-595 (699)
36 2qc5_A Streptogramin B lactona 99.3 3.7E-10 1.3E-14 107.3 19.6 135 82-250 103-240 (300)
37 2fp8_A Strictosidine synthase; 99.2 5.9E-11 2E-15 117.2 12.8 151 82-250 18-195 (322)
38 3e5z_A Putative gluconolactona 99.2 5.2E-10 1.8E-14 108.1 19.1 136 82-250 27-182 (296)
39 2p4o_A Hypothetical protein; p 99.2 4.6E-10 1.6E-14 110.6 16.9 113 83-231 32-148 (306)
40 3e5z_A Putative gluconolactona 99.2 9.8E-10 3.4E-14 106.2 18.7 136 83-250 69-228 (296)
41 2z2n_A Virginiamycin B lyase; 99.2 1.4E-09 4.8E-14 103.2 19.2 135 82-250 98-235 (299)
42 2z2n_A Virginiamycin B lyase; 99.2 1.9E-09 6.6E-14 102.3 19.5 132 82-247 140-274 (299)
43 1n7d_A LDL receptor, low-densi 99.1 1.7E-10 5.7E-15 128.2 11.6 114 82-229 495-613 (699)
44 2ism_A Putative oxidoreductase 99.1 1.4E-09 4.9E-14 110.5 17.3 134 82-230 74-241 (352)
45 3a9g_A Putative uncharacterize 99.1 1.8E-09 6.1E-14 110.2 17.9 150 68-249 17-206 (354)
46 3dr2_A Exported gluconolactona 99.1 2.2E-09 7.6E-14 105.1 17.8 134 83-250 45-198 (305)
47 3dr2_A Exported gluconolactona 99.1 1.9E-09 6.5E-14 105.6 16.8 134 83-250 86-249 (305)
48 2ism_A Putative oxidoreductase 99.1 2E-09 6.8E-14 109.5 16.6 141 82-249 30-211 (352)
49 2p4o_A Hypothetical protein; p 99.1 4.3E-09 1.5E-13 103.6 17.2 140 84-250 73-222 (306)
50 3g4e_A Regucalcin; six bladed 99.0 2.2E-09 7.4E-14 105.0 14.8 132 82-248 97-249 (297)
51 3g4e_A Regucalcin; six bladed 99.0 3.1E-09 1.1E-13 103.8 14.8 133 84-250 55-209 (297)
52 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 5.2E-09 1.8E-13 100.7 15.3 139 82-248 17-180 (314)
53 2qe8_A Uncharacterized protein 99.0 1.5E-08 5.1E-13 101.3 18.9 157 80-250 64-258 (343)
54 3sre_A PON1, serum paraoxonase 99.0 5.5E-09 1.9E-13 107.5 15.2 145 83-262 112-285 (355)
55 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 3.6E-08 1.2E-12 94.8 16.4 132 83-248 117-276 (314)
56 2g8s_A Glucose/sorbosone dehyd 98.9 7.7E-08 2.6E-12 97.9 18.6 166 67-263 5-217 (353)
57 2qe8_A Uncharacterized protein 98.9 8E-08 2.7E-12 96.0 18.3 123 83-231 17-155 (343)
58 2dg1_A DRP35, lactonase; beta 98.8 1.5E-07 5E-12 91.8 18.3 136 83-248 135-288 (333)
59 3dsm_A Uncharacterized protein 98.8 1.3E-07 4.5E-12 93.9 18.1 135 82-249 83-234 (328)
60 3das_A Putative oxidoreductase 98.8 1.4E-07 4.9E-12 96.7 18.6 163 71-265 23-223 (347)
61 2dg1_A DRP35, lactonase; beta 98.8 1.9E-07 6.5E-12 91.0 18.0 134 83-249 45-191 (333)
62 1cru_A Protein (soluble quinop 98.8 1.3E-07 4.3E-12 100.1 17.3 158 66-249 13-237 (454)
63 3dsm_A Uncharacterized protein 98.7 1.9E-07 6.5E-12 92.8 15.2 127 84-249 132-276 (328)
64 3a9g_A Putative uncharacterize 98.7 2.1E-07 7.2E-12 94.9 14.9 128 82-229 72-230 (354)
65 2ghs_A AGR_C_1268P; regucalcin 98.6 7.6E-07 2.6E-11 88.4 17.4 130 83-248 134-279 (326)
66 2p9w_A MAL S 1 allergenic prot 98.6 1.7E-06 5.9E-11 88.2 20.1 132 84-231 64-216 (334)
67 3vgz_A Uncharacterized protein 98.6 3.9E-06 1.3E-10 81.3 19.7 140 84-250 42-195 (353)
68 3hfq_A Uncharacterized protein 98.5 1.2E-06 4.2E-11 85.8 15.3 125 83-229 40-170 (347)
69 2ghs_A AGR_C_1268P; regucalcin 98.5 1.7E-06 5.7E-11 85.9 16.2 133 84-250 91-240 (326)
70 3no2_A Uncharacterized protein 98.5 2.6E-06 9E-11 83.3 16.3 135 84-250 78-223 (276)
71 3no2_A Uncharacterized protein 98.5 2.9E-06 9.9E-11 83.0 16.4 132 84-247 126-273 (276)
72 2p9w_A MAL S 1 allergenic prot 98.5 1.2E-06 4.1E-11 89.4 13.4 147 84-249 14-194 (334)
73 3vgz_A Uncharacterized protein 98.5 2.7E-05 9.3E-10 75.3 22.3 140 84-250 90-241 (353)
74 3sre_A PON1, serum paraoxonase 98.4 3.1E-07 1.1E-11 94.5 7.5 111 80-229 162-297 (355)
75 3hfq_A Uncharacterized protein 98.4 8.1E-06 2.8E-10 79.8 16.1 121 83-229 187-316 (347)
76 3u4y_A Uncharacterized protein 98.3 2.2E-05 7.5E-10 75.7 18.1 143 82-248 175-322 (331)
77 3scy_A Hypothetical bacterial 98.3 4.1E-05 1.4E-09 75.4 19.2 145 84-250 156-316 (361)
78 3scy_A Hypothetical bacterial 98.3 3.4E-05 1.2E-09 76.0 17.9 119 82-229 210-336 (361)
79 2g8s_A Glucose/sorbosone dehyd 98.2 3E-06 1E-10 86.1 10.1 128 84-227 67-228 (353)
80 3das_A Putative oxidoreductase 98.2 1.4E-05 4.9E-10 81.9 14.6 129 82-230 79-235 (347)
81 4a9v_A PHOX; hydrolase, beta-p 98.2 1.4E-05 4.7E-10 86.9 13.4 122 80-217 381-549 (592)
82 2iwa_A Glutamine cyclotransfer 98.0 0.00011 3.8E-09 72.6 16.2 132 84-250 67-216 (266)
83 3u4y_A Uncharacterized protein 98.0 7.8E-05 2.7E-09 71.8 14.6 119 82-233 127-255 (331)
84 1ri6_A Putative isomerase YBHE 98.0 0.00037 1.3E-08 66.6 18.0 141 83-250 178-333 (343)
85 2iwa_A Glutamine cyclotransfer 97.9 0.0001 3.5E-09 72.8 14.1 110 84-231 22-136 (266)
86 1ri6_A Putative isomerase YBHE 97.9 0.00037 1.3E-08 66.6 16.1 114 84-230 39-160 (343)
87 3nok_A Glutaminyl cyclase; bet 97.8 0.00041 1.4E-08 68.7 16.3 130 85-250 98-245 (268)
88 1cru_A Protein (soluble quinop 97.8 4.5E-05 1.5E-09 80.5 9.8 121 84-221 78-249 (454)
89 2wg3_C Hedgehog-interacting pr 97.8 0.00076 2.6E-08 71.5 18.4 162 68-252 2-229 (463)
90 3nol_A Glutamine cyclotransfer 97.8 0.00078 2.7E-08 66.5 17.0 130 85-250 89-235 (262)
91 3mbr_X Glutamine cyclotransfer 97.8 0.00092 3.1E-08 65.2 17.4 130 85-250 67-214 (243)
92 1l0q_A Surface layer protein; 97.8 0.0011 3.7E-08 65.3 18.1 128 84-248 75-208 (391)
93 3qqz_A Putative uncharacterize 97.8 0.00051 1.7E-08 67.4 15.4 125 86-229 124-252 (255)
94 1jof_A Carboxy-CIS,CIS-muconat 97.7 0.0013 4.4E-08 65.4 18.2 149 83-249 145-316 (365)
95 3qqz_A Putative uncharacterize 97.7 0.0013 4.4E-08 64.5 17.5 153 83-258 70-240 (255)
96 1jof_A Carboxy-CIS,CIS-muconat 97.7 0.00069 2.4E-08 67.4 14.9 133 82-231 192-342 (365)
97 1jmx_B Amine dehydrogenase; ox 97.7 0.00035 1.2E-08 67.1 12.2 117 85-230 2-134 (349)
98 3nol_A Glutamine cyclotransfer 97.6 0.0011 3.9E-08 65.3 15.8 126 84-229 128-255 (262)
99 1l0q_A Surface layer protein; 97.6 0.0039 1.3E-07 61.2 19.6 112 84-233 33-150 (391)
100 3mbr_X Glutamine cyclotransfer 97.5 0.0018 6.1E-08 63.2 15.5 127 84-229 106-234 (243)
101 1pby_B Quinohemoprotein amine 97.5 0.0019 6.5E-08 61.4 15.1 115 84-233 35-166 (337)
102 3bws_A Protein LP49; two-domai 97.5 0.0024 8.2E-08 63.7 16.0 110 84-230 304-432 (433)
103 3nok_A Glutaminyl cyclase; bet 97.4 0.0016 5.4E-08 64.5 13.2 106 85-231 57-165 (268)
104 1jmx_B Amine dehydrogenase; ox 97.3 0.0022 7.5E-08 61.4 13.2 115 84-232 44-177 (349)
105 1tl2_A L10, protein (tachylect 97.3 0.0032 1.1E-07 61.0 13.5 135 56-228 14-161 (236)
106 1nir_A Nitrite reductase; hemo 97.3 0.012 4.2E-07 62.7 19.4 140 84-250 180-334 (543)
107 3bws_A Protein LP49; two-domai 97.3 0.0033 1.1E-07 62.7 13.9 136 84-249 124-263 (433)
108 3c75_H MADH, methylamine dehyd 97.1 0.0037 1.3E-07 65.6 12.8 110 93-233 83-212 (426)
109 3amr_A 3-phytase; beta-propell 97.1 0.034 1.2E-06 57.0 19.4 161 68-265 58-254 (355)
110 3sjl_D Methylamine dehydrogena 97.0 0.0048 1.6E-07 64.0 12.9 111 91-233 41-172 (386)
111 2mad_H Methylamine dehydrogena 97.0 0.012 4.2E-07 59.7 15.6 115 83-228 67-194 (373)
112 3zwu_A Alkaline phosphatase PH 97.0 0.0053 1.8E-07 67.0 13.6 122 80-216 381-548 (592)
113 2oiz_A Aromatic amine dehydrog 97.0 0.014 4.7E-07 58.5 15.5 48 201-250 307-358 (361)
114 1pby_B Quinohemoprotein amine 96.9 0.033 1.1E-06 52.7 16.4 127 95-250 2-145 (337)
115 3c75_H MADH, methylamine dehyd 96.9 0.006 2E-07 64.0 12.0 75 83-170 119-206 (426)
116 1nir_A Nitrite reductase; hemo 96.8 0.0056 1.9E-07 65.4 11.7 107 89-233 144-260 (543)
117 1qks_A Cytochrome CD1 nitrite 96.8 0.12 4.2E-06 55.7 21.6 130 83-233 197-376 (567)
118 4a9v_A PHOX; hydrolase, beta-p 96.7 0.0089 3E-07 65.0 12.2 121 140-264 381-552 (592)
119 1mda_H Methylamine dehydrogena 96.7 0.011 3.6E-07 60.7 11.8 106 94-230 32-158 (368)
120 1fwx_A Nitrous oxide reductase 96.6 0.0053 1.8E-07 67.0 9.8 116 83-223 277-413 (595)
121 2mad_H Methylamine dehydrogena 96.5 0.033 1.1E-06 56.6 14.5 110 92-232 30-158 (373)
122 3sjl_D Methylamine dehydrogena 96.5 0.064 2.2E-06 55.5 16.7 113 83-223 79-212 (386)
123 1mda_H Methylamine dehydrogena 96.5 0.0073 2.5E-07 61.9 9.4 114 83-230 66-194 (368)
124 3q6k_A 43.2 kDa salivary prote 96.5 0.075 2.6E-06 54.9 16.9 155 84-262 153-342 (381)
125 2ece_A 462AA long hypothetical 96.2 0.078 2.7E-06 56.2 15.4 31 199-229 321-351 (462)
126 1qks_A Cytochrome CD1 nitrite 96.2 0.027 9.3E-07 60.8 12.2 103 90-230 163-275 (567)
127 2ece_A 462AA long hypothetical 96.2 0.082 2.8E-06 56.0 15.3 142 84-229 252-424 (462)
128 3q6k_A 43.2 kDa salivary prote 96.1 0.037 1.3E-06 57.3 12.2 105 83-217 220-341 (381)
129 1fwx_A Nitrous oxide reductase 96.1 0.036 1.2E-06 60.5 12.5 72 143-230 277-361 (595)
130 2oiz_A Aromatic amine dehydrog 96.0 0.048 1.6E-06 54.6 12.0 109 94-233 16-143 (361)
131 3s25_A Hypothetical 7-bladed b 95.9 0.029 9.8E-07 55.8 9.9 107 87-236 108-222 (302)
132 2wg3_C Hedgehog-interacting pr 95.9 0.098 3.4E-06 55.2 14.4 75 143-227 276-370 (463)
133 3hxj_A Pyrrolo-quinoline quino 95.9 0.084 2.9E-06 50.3 12.8 69 144-232 216-286 (330)
134 2ymu_A WD-40 repeat protein; u 95.5 0.26 8.8E-06 50.9 15.5 112 85-233 429-542 (577)
135 2ymu_A WD-40 repeat protein; u 95.4 0.58 2E-05 48.2 17.8 109 85-230 19-129 (577)
136 3hxj_A Pyrrolo-quinoline quino 95.4 0.22 7.6E-06 47.3 13.6 106 85-229 217-323 (330)
137 1gxr_A ESG1, transducin-like e 95.3 1.2 4.3E-05 41.5 18.3 114 84-234 185-300 (337)
138 1gxr_A ESG1, transducin-like e 95.3 0.31 1E-05 45.8 14.0 108 84-228 226-335 (337)
139 4a2l_A BT_4663, two-component 95.2 0.15 5E-06 56.3 13.3 113 84-232 89-204 (795)
140 3ow8_A WD repeat-containing pr 95.0 0.62 2.1E-05 45.1 15.9 114 85-234 167-283 (321)
141 3s25_A Hypothetical 7-bladed b 94.7 0.21 7.1E-06 49.5 11.6 104 88-234 20-142 (302)
142 1tl2_A L10, protein (tachylect 94.7 0.55 1.9E-05 45.4 14.0 111 86-233 91-213 (236)
143 3iz6_a 40S ribosomal protein R 94.6 1.4 4.9E-05 43.4 17.6 121 85-230 252-375 (380)
144 3amr_A 3-phytase; beta-propell 94.6 0.45 1.5E-05 48.7 14.0 75 81-170 178-260 (355)
145 3ow8_A WD repeat-containing pr 94.6 0.52 1.8E-05 45.7 13.9 108 85-228 209-319 (321)
146 4ery_A WD repeat-containing pr 94.3 1.1 3.9E-05 42.2 15.5 114 84-233 25-141 (312)
147 4gqb_B Methylosome protein 50; 94.3 0.46 1.6E-05 46.9 13.0 115 85-232 130-248 (344)
148 2ynn_A Coatomer subunit beta'; 94.2 1.4 4.9E-05 41.8 16.0 112 84-231 15-129 (304)
149 1got_B GT-beta; complex (GTP-b 94.2 0.96 3.3E-05 43.8 15.0 113 85-231 187-302 (340)
150 3zwl_B Eukaryotic translation 94.0 1.3 4.5E-05 41.8 15.2 110 84-230 34-151 (369)
151 1k8k_C P40, ARP2/3 complex 41 94.0 0.7 2.4E-05 44.2 13.3 115 85-231 11-128 (372)
152 3v9f_A Two-component system se 94.0 0.87 3E-05 50.0 15.6 120 83-235 495-616 (781)
153 4ery_A WD repeat-containing pr 93.9 2.7 9.3E-05 39.5 17.2 114 84-233 67-183 (312)
154 3ei3_B DNA damage-binding prot 93.7 1.1 3.6E-05 43.7 14.3 109 85-230 166-282 (383)
155 2aq5_A Coronin-1A; WD40 repeat 93.6 3 0.0001 40.9 17.4 116 84-231 133-255 (402)
156 1erj_A Transcriptional repress 93.5 1.2 4.2E-05 44.1 14.5 112 85-232 126-240 (393)
157 2aq5_A Coronin-1A; WD40 repeat 93.4 1.6 5.3E-05 43.0 15.0 117 84-233 83-210 (402)
158 3mmy_A MRNA export factor; mRN 93.4 1.3 4.6E-05 41.7 13.9 114 84-231 41-161 (368)
159 3zwl_B Eukaryotic translation 93.2 1.9 6.5E-05 40.7 14.8 110 84-230 220-346 (369)
160 3v9f_A Two-component system se 93.2 1.3 4.3E-05 48.7 15.2 119 84-233 451-571 (781)
161 1got_B GT-beta; complex (GTP-b 93.1 1.3 4.5E-05 42.8 13.7 109 84-226 228-339 (340)
162 2hqs_A Protein TOLB; TOLB, PAL 93.1 3.4 0.00011 41.6 17.2 114 84-234 224-348 (415)
163 3zwu_A Alkaline phosphatase PH 93.0 0.95 3.3E-05 49.3 13.6 121 140-264 381-552 (592)
164 1vyh_C Platelet-activating fac 93.0 0.87 3E-05 45.7 12.6 114 84-233 110-226 (410)
165 1r5m_A SIR4-interacting protei 92.9 0.9 3.1E-05 43.9 12.1 68 84-170 291-358 (425)
166 3iz6_a 40S ribosomal protein R 92.9 4.5 0.00016 39.7 17.5 119 87-233 210-332 (380)
167 1vyh_C Platelet-activating fac 92.8 1.2 4E-05 44.7 13.3 113 85-233 153-268 (410)
168 1sq9_A Antiviral protein SKI8; 92.8 1.1 3.9E-05 43.3 12.7 141 84-230 235-395 (397)
169 3vl1_A 26S proteasome regulato 92.7 3.5 0.00012 40.2 16.2 130 84-233 141-281 (420)
170 2ynn_A Coatomer subunit beta'; 92.6 2.6 8.9E-05 40.0 14.9 110 86-230 59-172 (304)
171 1r5m_A SIR4-interacting protei 92.4 1.7 5.8E-05 41.9 13.4 109 85-230 250-361 (425)
172 1sq9_A Antiviral protein SKI8; 92.4 4.6 0.00016 38.9 16.5 132 84-233 188-325 (397)
173 4a2l_A BT_4663, two-component 92.2 4.1 0.00014 44.7 17.8 118 84-234 499-618 (795)
174 2pbi_B Guanine nucleotide-bind 92.1 1.7 5.9E-05 42.5 13.1 108 85-226 243-353 (354)
175 3ei3_B DNA damage-binding prot 92.0 2.1 7.1E-05 41.6 13.5 113 84-230 120-236 (383)
176 3mkq_A Coatomer beta'-subunit; 91.9 4.3 0.00015 43.6 17.2 112 84-231 15-129 (814)
177 2hqs_A Protein TOLB; TOLB, PAL 91.8 9.7 0.00033 38.2 18.8 113 84-233 180-303 (415)
178 4g56_B MGC81050 protein; prote 91.8 0.96 3.3E-05 44.5 10.9 115 85-232 142-260 (357)
179 4e54_B DNA damage-binding prot 91.7 2.5 8.7E-05 42.3 14.1 117 85-232 122-242 (435)
180 3vl1_A 26S proteasome regulato 91.7 3 0.0001 40.7 14.3 110 89-234 104-216 (420)
181 4gqb_B Methylosome protein 50; 91.5 3.9 0.00013 40.2 15.1 116 86-233 86-204 (344)
182 3k26_A Polycomb protein EED; W 91.5 4.1 0.00014 38.3 14.7 114 84-230 71-192 (366)
183 3fm0_A Protein CIAO1; WDR39,SG 91.4 4 0.00014 39.5 14.9 113 85-231 64-182 (345)
184 3frx_A Guanine nucleotide-bind 91.4 3.2 0.00011 39.7 14.0 116 84-229 198-316 (319)
185 3f3f_A Nucleoporin SEH1; struc 91.1 3.5 0.00012 38.0 13.6 112 85-230 14-143 (351)
186 4h5i_A Guanine nucleotide-exch 91.1 1.6 5.5E-05 43.1 11.8 69 145-230 272-343 (365)
187 2vdu_B TRNA (guanine-N(7)-)-me 91.1 2.2 7.6E-05 42.9 13.1 115 84-232 151-273 (450)
188 2xyi_A Probable histone-bindin 91.1 3.2 0.00011 41.6 14.1 114 84-230 233-353 (430)
189 1erj_A Transcriptional repress 90.7 4.5 0.00016 39.9 14.7 116 85-230 168-287 (393)
190 1k8k_C P40, ARP2/3 complex 41 90.6 2.3 7.7E-05 40.5 12.0 113 84-229 54-172 (372)
191 3dw8_B Serine/threonine-protei 90.6 10 0.00035 37.0 17.1 142 84-233 228-376 (447)
192 3fm0_A Protein CIAO1; WDR39,SG 90.5 2.3 7.9E-05 41.2 12.2 113 85-230 19-136 (345)
193 3odt_A Protein DOA1; ubiquitin 90.4 6.7 0.00023 36.0 14.8 109 84-231 186-297 (313)
194 2pm9_A Protein WEB1, protein t 90.3 2.4 8.1E-05 41.2 12.0 114 84-231 216-338 (416)
195 4e54_B DNA damage-binding prot 90.3 2.3 7.9E-05 42.6 12.3 113 85-230 167-282 (435)
196 3lrv_A PRE-mRNA-splicing facto 90.2 4.5 0.00015 38.9 13.8 113 85-233 128-247 (343)
197 2xyi_A Probable histone-bindin 90.0 4.1 0.00014 40.8 13.8 121 84-231 130-264 (430)
198 3jrp_A Fusion protein of prote 89.9 2.9 0.0001 39.6 12.1 112 85-230 14-134 (379)
199 3dwl_C Actin-related protein 2 89.7 2.3 8E-05 40.9 11.3 112 85-229 58-176 (377)
200 2ojh_A Uncharacterized protein 89.6 9 0.00031 34.4 14.7 72 145-233 44-122 (297)
201 4aow_A Guanine nucleotide-bind 89.5 7.2 0.00024 36.4 14.3 116 85-229 218-336 (340)
202 2ojh_A Uncharacterized protein 89.4 12 0.00039 33.7 16.8 69 84-170 43-116 (297)
203 1nr0_A Actin interacting prote 89.4 2.4 8.2E-05 44.9 12.1 117 85-231 451-568 (611)
204 4aez_A CDC20, WD repeat-contai 89.3 9.7 0.00033 37.3 15.8 114 84-231 261-381 (401)
205 4g56_B MGC81050 protein; prote 89.2 3.5 0.00012 40.4 12.4 112 84-230 228-343 (357)
206 4aez_A CDC20, WD repeat-contai 89.0 9.9 0.00034 37.3 15.6 111 84-231 219-337 (401)
207 2pm7_B Protein transport prote 88.6 7.6 0.00026 36.5 13.9 111 86-230 13-132 (297)
208 2pbi_B Guanine nucleotide-bind 88.5 9.9 0.00034 36.9 15.0 112 86-233 158-274 (354)
209 3frx_A Guanine nucleotide-bind 88.4 10 0.00035 36.1 14.9 113 85-234 110-231 (319)
210 3sfz_A APAF-1, apoptotic pepti 88.2 6.9 0.00024 44.6 15.6 115 84-233 617-735 (1249)
211 3mkq_A Coatomer beta'-subunit; 88.0 17 0.00059 38.8 17.8 112 85-231 143-260 (814)
212 1yfq_A Cell cycle arrest prote 87.5 3.3 0.00011 38.9 10.5 114 84-230 13-131 (342)
213 3dw8_B Serine/threonine-protei 87.5 8.4 0.00029 37.7 13.9 128 84-230 179-315 (447)
214 1nr0_A Actin interacting prote 87.4 18 0.00062 38.0 17.3 138 85-234 193-359 (611)
215 2vdu_B TRNA (guanine-N(7)-)-me 87.4 6.9 0.00024 39.2 13.4 117 84-234 104-233 (450)
216 3i2n_A WD repeat-containing pr 87.3 2.7 9.3E-05 39.6 9.8 109 90-230 176-291 (357)
217 2pm9_A Protein WEB1, protein t 87.2 5.6 0.00019 38.5 12.2 123 84-234 69-201 (416)
218 3dm0_A Maltose-binding peripla 87.2 15 0.00051 39.2 16.7 117 85-233 433-553 (694)
219 2z3z_A Dipeptidyl aminopeptida 86.9 18 0.00062 38.3 17.0 116 85-231 260-392 (706)
220 2xzm_R RACK1; ribosome, transl 86.7 11 0.00037 36.2 14.0 111 86-230 25-149 (343)
221 1pgu_A Actin interacting prote 86.5 12 0.00041 38.2 14.8 120 84-233 162-286 (615)
222 1pgu_A Actin interacting prote 86.4 5 0.00017 41.1 11.9 110 84-229 490-613 (615)
223 3dm0_A Maltose-binding peripla 86.1 18 0.00063 38.5 16.7 118 85-235 475-597 (694)
224 2ecf_A Dipeptidyl peptidase IV 85.9 22 0.00074 37.8 17.1 82 84-170 38-135 (741)
225 3vu4_A KMHSV2; beta-propeller 85.3 13 0.00044 36.1 13.8 125 84-229 197-335 (355)
226 3o4h_A Acylamino-acid-releasin 85.3 6.3 0.00021 41.0 12.2 114 86-228 153-274 (582)
227 3azo_A Aminopeptidase; POP fam 85.1 30 0.001 36.3 17.5 121 86-231 191-326 (662)
228 3dwl_C Actin-related protein 2 85.1 0.48 1.6E-05 45.8 3.2 69 86-170 15-83 (377)
229 3mmy_A MRNA export factor; mRN 84.9 25 0.00085 32.7 15.7 68 84-170 88-157 (368)
230 3jrp_A Fusion protein of prote 84.7 26 0.0009 32.8 16.7 118 84-231 103-241 (379)
231 3vu4_A KMHSV2; beta-propeller 84.6 16 0.00056 35.4 14.2 70 145-230 198-271 (355)
232 3lrv_A PRE-mRNA-splicing facto 84.4 7.1 0.00024 37.4 11.3 115 85-230 173-292 (343)
233 2hes_X YDR267CP; beta-propelle 84.2 15 0.0005 35.2 13.5 111 85-229 110-229 (330)
234 2hes_X YDR267CP; beta-propelle 83.9 13 0.00043 35.7 12.9 112 85-230 61-184 (330)
235 3ott_A Two-component system se 83.4 15 0.00052 39.9 14.6 115 85-234 474-590 (758)
236 1yfq_A Cell cycle arrest prote 83.0 24 0.00081 32.8 14.2 123 84-233 152-285 (342)
237 3sfz_A APAF-1, apoptotic pepti 83.0 14 0.00048 42.1 14.7 112 84-231 659-775 (1249)
238 2z3z_A Dipeptidyl aminopeptida 82.8 13 0.00044 39.5 13.5 64 84-170 83-147 (706)
239 3k26_A Polycomb protein EED; W 82.2 17 0.00058 34.0 12.8 121 84-234 20-151 (366)
240 3bg1_A Protein SEC13 homolog; 82.1 11 0.00037 35.9 11.5 112 86-230 17-136 (316)
241 4aow_A Guanine nucleotide-bind 82.0 32 0.0011 31.8 16.5 70 85-170 41-114 (340)
242 3v7d_B Cell division control p 81.9 42 0.0014 33.1 16.5 108 89-234 275-385 (464)
243 2xzm_R RACK1; ribosome, transl 81.3 38 0.0013 32.2 16.3 68 85-170 79-146 (343)
244 4h5i_A Guanine nucleotide-exch 80.9 6.2 0.00021 38.8 9.5 69 85-170 272-340 (365)
245 3azo_A Aminopeptidase; POP fam 80.9 26 0.00091 36.6 15.0 83 84-177 243-331 (662)
246 2oaj_A Protein SNI1; WD40 repe 80.5 5.9 0.0002 44.6 10.3 75 87-170 440-516 (902)
247 3jro_A Fusion protein of prote 80.1 8 0.00027 42.2 10.9 70 85-170 12-83 (753)
248 2oit_A Nucleoporin 214KDA; NH2 80.0 5.1 0.00017 40.9 8.8 117 84-231 94-224 (434)
249 3v7d_B Cell division control p 80.0 48 0.0017 32.6 17.4 113 84-234 312-425 (464)
250 3i2n_A WD repeat-containing pr 79.9 6 0.00021 37.1 8.7 129 84-229 211-352 (357)
251 2oaj_A Protein SNI1; WD40 repe 79.8 21 0.00073 40.1 14.6 111 84-233 19-132 (902)
252 4a11_B DNA excision repair pro 79.8 23 0.00078 33.7 13.0 110 84-230 101-218 (408)
253 3pe7_A Oligogalacturonate lyas 79.7 14 0.00049 35.3 11.6 69 85-170 190-270 (388)
254 3gre_A Serine/threonine-protei 79.5 14 0.00049 36.2 11.7 64 91-170 179-242 (437)
255 2ecf_A Dipeptidyl peptidase IV 78.2 45 0.0015 35.4 15.9 76 85-175 289-372 (741)
256 3c5m_A Oligogalacturonate lyas 77.8 46 0.0016 31.5 14.5 120 85-232 240-386 (396)
257 3o4h_A Acylamino-acid-releasin 77.1 13 0.00045 38.5 11.1 71 146-234 153-231 (582)
258 2j04_A TAU60, YPL007P, hypothe 75.7 18 0.00063 39.2 11.9 117 84-232 87-213 (588)
259 3jro_A Fusion protein of prote 75.6 29 0.00097 37.8 13.7 114 84-231 101-239 (753)
260 3odt_A Protein DOA1; ubiquitin 75.6 47 0.0016 30.1 14.8 110 84-228 61-172 (313)
261 3pe7_A Oligogalacturonate lyas 75.6 33 0.0011 32.7 12.8 64 88-170 41-108 (388)
262 4a5s_A Dipeptidyl peptidase 4 75.5 19 0.00064 39.0 12.1 117 87-230 21-151 (740)
263 4a11_B DNA excision repair pro 74.4 59 0.002 30.7 16.8 84 85-170 189-273 (408)
264 3f3f_A Nucleoporin SEH1; struc 74.1 24 0.00082 32.2 10.9 71 84-170 169-246 (351)
265 1k32_A Tricorn protease; prote 72.1 23 0.0008 40.0 12.2 68 84-170 380-458 (1045)
266 3gre_A Serine/threonine-protei 71.8 76 0.0026 30.8 15.1 130 84-234 113-249 (437)
267 1k32_A Tricorn protease; prote 71.3 66 0.0023 36.2 15.8 35 144-178 380-416 (1045)
268 3c5m_A Oligogalacturonate lyas 70.9 72 0.0025 30.2 14.0 33 145-177 240-279 (396)
269 1xfd_A DIP, dipeptidyl aminope 69.5 13 0.00045 39.4 8.9 71 84-170 18-97 (723)
270 2pm7_B Protein transport prote 68.7 74 0.0025 29.5 14.2 69 86-170 57-129 (297)
271 2j04_A TAU60, YPL007P, hypothe 67.5 1.4E+02 0.0049 32.3 17.4 72 85-170 132-208 (588)
272 3ott_A Two-component system se 65.6 1.4E+02 0.0048 32.1 16.3 120 85-229 326-447 (758)
273 3q7m_A Lipoprotein YFGL, BAMB; 64.7 84 0.0029 30.1 13.1 55 93-170 239-293 (376)
274 4gga_A P55CDC, cell division c 62.7 1.1E+02 0.0038 29.9 13.7 107 85-229 150-260 (420)
275 2j04_B YDR362CP, TAU91; beta p 62.4 19 0.00065 37.9 8.4 68 145-230 358-428 (524)
276 2ovr_B FBW7, F-BOX/WD repeat p 60.9 1.2E+02 0.0039 29.8 13.5 28 201-229 410-441 (445)
277 3q7m_A Lipoprotein YFGL, BAMB; 60.7 1E+02 0.0035 29.5 12.9 65 85-170 270-334 (376)
278 4ggc_A P55CDC, cell division c 59.7 1E+02 0.0035 27.9 13.9 108 85-230 70-181 (318)
279 4gq1_A NUP37; propeller, trans 57.6 36 0.0012 33.4 9.1 109 93-231 100-219 (393)
280 2gop_A Trilobed protease; beta 56.3 94 0.0032 29.0 11.5 56 84-159 60-121 (347)
281 1xfd_A DIP, dipeptidyl aminope 55.8 1.2E+02 0.004 31.9 13.2 69 84-170 62-140 (723)
282 1z68_A Fibroblast activation p 54.9 66 0.0023 34.0 11.2 69 86-170 19-96 (719)
283 3sbq_A Nitrous-oxide reductase 53.3 27 0.00092 38.1 7.6 75 83-170 323-405 (638)
284 4gq1_A NUP37; propeller, trans 52.7 1.5E+02 0.0053 28.7 12.8 128 85-230 139-286 (393)
285 4gga_A P55CDC, cell division c 51.0 1.8E+02 0.0063 28.2 14.4 66 87-170 110-175 (420)
286 1p22_A F-BOX/WD-repeat protein 49.7 1.9E+02 0.0066 28.1 13.2 62 89-170 138-199 (435)
287 4a5s_A Dipeptidyl peptidase 4 47.5 61 0.0021 34.9 9.5 119 86-231 263-401 (740)
288 3sbq_A Nitrous-oxide reductase 47.4 28 0.00097 37.9 6.6 82 143-229 323-407 (638)
289 2j04_B YDR362CP, TAU91; beta p 46.0 1.6E+02 0.0054 30.7 12.2 114 85-232 269-388 (524)
290 3elq_A Arylsulfate sulfotransf 42.6 2.8E+02 0.0096 29.8 13.5 134 84-233 356-543 (571)
291 2gop_A Trilobed protease; beta 41.3 1.3E+02 0.0046 27.9 9.9 26 145-170 61-91 (347)
292 1z68_A Fibroblast activation p 39.5 1.2E+02 0.004 32.1 10.0 25 86-110 256-284 (719)
293 4ggc_A P55CDC, cell division c 36.8 2.3E+02 0.008 25.4 14.8 65 88-170 31-95 (318)
294 2oit_A Nucleoporin 214KDA; NH2 35.7 70 0.0024 32.2 7.2 70 84-171 151-221 (434)
295 2xdw_A Prolyl endopeptidase; a 35.6 3.8E+02 0.013 28.3 13.5 29 86-114 128-161 (710)
296 2bkl_A Prolyl endopeptidase; m 33.2 2.7E+02 0.0091 29.5 11.7 113 86-231 171-305 (695)
297 2ad6_A Methanol dehydrogenase 30.8 4.4E+02 0.015 27.6 12.8 69 93-170 62-131 (571)
298 1kv9_A Type II quinohemoprotei 30.3 4.2E+02 0.014 28.3 12.7 14 146-159 384-398 (668)
299 3bg1_A Protein SEC13 homolog; 29.9 1.5E+02 0.0052 27.6 8.2 69 86-170 61-133 (316)
300 1p22_A F-BOX/WD-repeat protein 29.6 3.9E+02 0.013 25.8 12.7 20 210-229 345-364 (435)
301 4h3o_A Lectin; cadmium, plant 27.1 2.5E+02 0.0085 22.7 9.8 26 83-108 50-75 (105)
302 1xip_A Nucleoporin NUP159; bet 25.2 5.3E+02 0.018 25.9 12.4 69 85-166 90-158 (388)
303 1yiq_A Quinohemoprotein alcoho 25.0 2.8E+02 0.0094 29.9 10.1 23 147-170 480-502 (689)
304 1kv9_A Type II quinohemoprotei 23.9 6.8E+02 0.023 26.6 15.5 17 151-167 321-337 (668)
305 3mez_B Mannose-specific lectin 23.8 2.3E+02 0.0079 23.1 7.3 17 147-163 60-76 (113)
306 2bkl_A Prolyl endopeptidase; m 23.5 6.6E+02 0.023 26.4 12.7 65 86-170 230-301 (695)
307 3s9j_A Member of DUF4221 famil 23.4 4.8E+02 0.017 26.2 10.9 72 91-174 35-112 (369)
308 2xdw_A Prolyl endopeptidase; a 23.4 6.7E+02 0.023 26.4 14.0 71 86-170 174-265 (710)
309 1xip_A Nucleoporin NUP159; bet 23.0 4.9E+02 0.017 26.1 10.9 118 84-225 39-160 (388)
310 2w18_A PALB2, fancn, partner a 20.8 6.5E+02 0.022 25.2 14.1 58 87-159 183-243 (356)
311 3dzw_A Agglutinin; lectin, man 20.5 3.1E+02 0.011 22.0 7.4 18 146-163 52-69 (109)
312 1kb0_A Quinohemoprotein alcoho 20.3 5.8E+02 0.02 27.3 11.4 110 86-230 396-567 (677)
No 1
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=3e-22 Score=214.62 Aligned_cols=151 Identities=26% Similarity=0.324 Sum_probs=125.3
Q ss_pred CCceEEEEccCCc-EEEEECCCCeEEEEeCCCCc--ccccEEEecCCCCccccCCCcccccccCCcc-eEEEc-------
Q 011333 83 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSL--YSRPKLVAGSAEGYSGHVDGKPREARMNHPK-GLTVD------- 151 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~--~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~-GIAvD------- 151 (488)
..|.+|+++++|+ |||+|..+|+|++++.++.. +...++++|.. |..|+.||.+..++|+.|. |+++|
T Consensus 310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~-g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~ 388 (496)
T 3kya_A 310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY-KQSGYRDDVGTEARMNNPCQGVFVKNPDYTGE 388 (496)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT-TBCCCBCCBGGGCBCSSEEEEEEEECTTCCSS
T ss_pred CCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC-CCCcccCCcccccccCCCeEEEEEcccccccc
Confidence 3689999999998 99999999999998876422 12237888863 5677779999999999999 89998
Q ss_pred CCCcEEEEECCCCEEEEEc-CCCcEEEeCCcc------CCCCCCCCC-CcccccCCCCCeeEEECCC-CeEEEEECCCCe
Q 011333 152 DRGNIYIADTMNMAIRKIS-DSGVTTIAGGKW------GRGGGHVDG-PSEDAKFSNDFDVVYIGSS-CSLLVIDRGNRA 222 (488)
Q Consensus 152 ~dG~LYVAD~~N~rIrkid-~ggVttIaGg~~------g~~~g~~dG-~~~~a~f~~P~gIa~vd~~-G~LYVaD~gN~r 222 (488)
.+|+|||||+.|||||+|+ +|.++|++|... +..+|+.|| ++.+++|+.|.+|+ ++++ |+|||+|++|+|
T Consensus 389 ~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIa-vd~~~g~lyVaD~~N~r 467 (496)
T 3kya_A 389 EEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLV-YDDVKEMFYVHDQVGHT 467 (496)
T ss_dssp CCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEE-EETTTTEEEEEETTTTE
T ss_pred CCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEE-EECCCCEEEEEeCCCCE
Confidence 6899999999999999999 677999998532 122366787 88999999999999 6765 999999999999
Q ss_pred EEEEEcCCCceEE
Q 011333 223 IREIQLHFDDCAY 235 (488)
Q Consensus 223 IrkI~~~g~~~~~ 235 (488)
||+|++.++.|.-
T Consensus 468 Irki~~~~~~~~~ 480 (496)
T 3kya_A 468 IRTISMEQEENVA 480 (496)
T ss_dssp EEEEEECCCC---
T ss_pred EEEEECCCCcccc
Confidence 9999999877753
No 2
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.83 E-value=5.4e-20 Score=193.33 Aligned_cols=144 Identities=24% Similarity=0.369 Sum_probs=121.8
Q ss_pred CceEEEEccCCc-EEEEECCCCeEEEEeCC--CCcccccEEEecCCCCccccCCCcccccccCCcceEEE---------c
Q 011333 84 EPYSVEVLPGGE-LLILDSANSNLYRISSS--LSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV---------D 151 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~~--g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAv---------D 151 (488)
.+.+|+++++|+ |||+|..+++|++++.+ ++.+..+.+++|.. +..|..||.+..++|+.|.||++ |
T Consensus 274 ~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd 352 (433)
T 4hw6_A 274 SNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQH-SSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE 352 (433)
T ss_dssp SCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECT-TCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred CcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecC-CCCccCCCcccceEEcCCccEEEEccccccccC
Confidence 467899999998 99999999999999876 33334567888863 55667788888999999999999 9
Q ss_pred CCCcEEEEECCCCEEEEEc-CCCcEEEeCCccCCCCCCCCC-CcccccCCCCCeeEEEC-CCCeEEEEECCCCeEEEEEc
Q 011333 152 DRGNIYIADTMNMAIRKIS-DSGVTTIAGGKWGRGGGHVDG-PSEDAKFSNDFDVVYIG-SSCSLLVIDRGNRAIREIQL 228 (488)
Q Consensus 152 ~dG~LYVAD~~N~rIrkid-~ggVttIaGg~~g~~~g~~dG-~~~~a~f~~P~gIa~vd-~~G~LYVaD~gN~rIrkI~~ 228 (488)
.+|+|||||+.|++|++++ +|.+++++|.......|+.+| .+.+++|+.|.+|+ ++ ++|+|||+|++|+|||+|++
T Consensus 353 ~~g~lyvaD~~n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~gia-vd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 353 DEYDFYFCDRDSHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIA-YDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp CCEEEEEEETTTTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEE-EETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCcEEEEECCCCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEE-EECCCCEEEEEeCCCCEEEEEec
Confidence 9999999999999999999 666999998643222456777 78889999999999 56 89999999999999999987
Q ss_pred C
Q 011333 229 H 229 (488)
Q Consensus 229 ~ 229 (488)
+
T Consensus 432 e 432 (433)
T 4hw6_A 432 E 432 (433)
T ss_dssp C
T ss_pred C
Confidence 5
No 3
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=4.7e-19 Score=185.73 Aligned_cols=144 Identities=29% Similarity=0.451 Sum_probs=120.0
Q ss_pred CCceEEEEccCCc-EEEEECCCCeEEEEeCCCC--cccccEEEecCCCCccccCCCcccccccCCcc-eEEE--------
Q 011333 83 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLS--LYSRPKLVAGSAEGYSGHVDGKPREARMNHPK-GLTV-------- 150 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~--~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~-GIAv-------- 150 (488)
..|.+|+++++|+ |||+|..+++|++++.++. .+..+.+++|.. |..|..+|.+..++|+.|. |+++
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~ 348 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQ-GAKDWVDGVGKKARMHAPRQGTFVKNPAYKGS 348 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECT-TCBCCBCEEGGGCBBSSEEEEEEEECGGGTTS
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccC-CCCCCCCCCCcceEeCCCcceEEEcccccccc
Confidence 4799999999998 9999999999999988742 234467888863 5566668888889999999 8999
Q ss_pred cCCCcEEEEECCCCEEEEEc-CCCcEEEeCCcc-CCCCCCCCC-CcccccCCCCCeeEEECC-CCeEEEEECCCCeEEEE
Q 011333 151 DDRGNIYIADTMNMAIRKIS-DSGVTTIAGGKW-GRGGGHVDG-PSEDAKFSNDFDVVYIGS-SCSLLVIDRGNRAIREI 226 (488)
Q Consensus 151 D~dG~LYVAD~~N~rIrkid-~ggVttIaGg~~-g~~~g~~dG-~~~~a~f~~P~gIa~vd~-~G~LYVaD~gN~rIrkI 226 (488)
|++|+|||||+.|++|++++ +|.+++++|... +. .|+.|| .+.+++|+.|.+|+ +++ +|+|||+|++|++||+|
T Consensus 349 D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~-~G~~dG~~~~~~~~~~P~gia-vd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 349 SDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGT-SGYNDGDLRQEARFNHPEGIV-YDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp SCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSS-SSCBCEETTTTCBCSSEEEEE-EETTTTEEEEEEGGGTEEEEE
T ss_pred CCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCC-CcccCCCchhhcEeCCCcEEE-EECCCCEEEEEECCCCeEEEE
Confidence 46799999999999999999 666899987532 22 355577 78889999999999 566 79999999999999999
Q ss_pred EcC
Q 011333 227 QLH 229 (488)
Q Consensus 227 ~~~ 229 (488)
+++
T Consensus 427 ~~e 429 (430)
T 3tc9_A 427 GYE 429 (430)
T ss_dssp EEC
T ss_pred ccC
Confidence 875
No 4
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.79 E-value=1e-18 Score=181.54 Aligned_cols=138 Identities=26% Similarity=0.391 Sum_probs=118.8
Q ss_pred Cce-EEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 84 EPY-SVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 84 ~P~-GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
+|. +|++++ +|.|||+|..+++|++++.++ .+.+++|.. +..|..+|.+..++|+.|.||++|++|+|||||+
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g----~~~~~~g~~-~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG----ECEWFCGSA-TQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETTTTEEEEECTTC----CEEEEEECT-TCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred CccccEEEeCCCCEEEEEeCCCCEEEEEecCC----CEEEEEeCC-CCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 577 999999 689999999999999999985 577888863 3456668888889999999999999999999999
Q ss_pred -CCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 162 -MNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 162 -~N~rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
.|++|++++ . +.+++++|.... .|+.+|.+..++|+.|.+|+ ++++|+|||+|++|++|++|+++
T Consensus 342 ~~~~~I~~~~~~~G~v~~~~g~~~~--~g~~~g~~~~~~~~~P~gia-vd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 342 FKGYCLRKLDILDGYVSTVAGQVDV--ASQIDGTPLEATFNYPYDIC-YDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTTCEEEEEETTTTEEEEEEECTTC--BSCCCBSTTTCCBSSEEEEE-ECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCCEEEEEECCCCEEEEEeCCCCC--CCcCCCChhceEeCCceEEE-EcCCCCEEEEECCCCeEEEEEeC
Confidence 999999999 4 558888875322 45667888889999999999 78889999999999999999863
No 5
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=6.1e-16 Score=165.79 Aligned_cols=132 Identities=17% Similarity=0.177 Sum_probs=101.9
Q ss_pred CCceEEEEcc-CCcEEEEECCCCeEEEEeCC-------CCcccc---------cEEEecCCCCccccCCCcccccccCCc
Q 011333 83 IEPYSVEVLP-GGELLILDSANSNLYRISSS-------LSLYSR---------PKLVAGSAEGYSGHVDGKPREARMNHP 145 (488)
Q Consensus 83 ~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~-------g~~~g~---------i~tvaG~~~G~~G~~dG~a~~a~Ln~P 145 (488)
.+|+++++++ +|.||++|..+++|++++++ ++.... ...++-. ..-..|
T Consensus 247 ~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~--------------~~~~~p 312 (496)
T 3kya_A 247 KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI--------------ADPSWE 312 (496)
T ss_dssp SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC--------------SSSSCC
T ss_pred CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec--------------CCCCCc
Confidence 5799999999 78899999999999999986 422100 0011100 012468
Q ss_pred ceEEEcCCCc-EEEEECCCCEEEEEc-CCC---c---EEEeCCccCCCCCCCCCCcccccCCCCC-eeEEEC-------C
Q 011333 146 KGLTVDDRGN-IYIADTMNMAIRKIS-DSG---V---TTIAGGKWGRGGGHVDGPSEDAKFSNDF-DVVYIG-------S 209 (488)
Q Consensus 146 ~GIAvD~dG~-LYVAD~~N~rIrkid-~gg---V---ttIaGg~~g~~~g~~dG~~~~a~f~~P~-gIa~vd-------~ 209 (488)
.+||++++|+ |||||+.+|+|++++ ++. + ++++|.. +. .|+.||.+..++|+.|. +++ ++ .
T Consensus 313 ~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~-g~-~G~~DG~~~~a~f~~P~~gv~-vd~~~~~~~~ 389 (496)
T 3kya_A 313 FQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY-KQ-SGYRDDVGTEARMNNPCQGVF-VKNPDYTGEE 389 (496)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT-TB-CCCBCCBGGGCBCSSEEEEEE-EECTTCCSSC
T ss_pred eEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC-CC-CcccCCcccccccCCCeEEEE-EccccccccC
Confidence 9999999998 899999999999988 432 2 6788742 22 46668999999999999 666 66 6
Q ss_pred CCeEEEEECCCCeEEEEEcCCC
Q 011333 210 SCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 210 ~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
+|+|||||++|||||+|+++|.
T Consensus 390 ~g~lyVaD~~N~rIr~i~~~G~ 411 (496)
T 3kya_A 390 EYDFYFVDRLNFCVRKVTPEGI 411 (496)
T ss_dssp CEEEEEEEGGGTEEEEECTTCB
T ss_pred CCeEEEEECCCCEEEEEeCCCC
Confidence 8999999999999999998874
No 6
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=1.1e-15 Score=160.07 Aligned_cols=148 Identities=19% Similarity=0.219 Sum_probs=114.0
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVA 159 (488)
+..|+++++++ +|.|||+|..+++|+++++++. ....+.... ....|++|++|++|+ |||+
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~---~~~~~~~~~--------------~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ---ETTPLFTIQ--------------DSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT---EEEEEEECS--------------SSSCCEEEEECTTSSEEEEE
T ss_pred CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC---cEEEEEEcC--------------CCCcceeEEEcCCCCEEEEE
Confidence 56899999999 8999999999999999999863 332332210 034699999999998 9999
Q ss_pred ECCCCEEEEEc-CCC------cEEEeCCccCCCCCCCCCCcccccCCCCC-eeEEE--------CCCCeEEEEECCCCeE
Q 011333 160 DTMNMAIRKIS-DSG------VTTIAGGKWGRGGGHVDGPSEDAKFSNDF-DVVYI--------GSSCSLLVIDRGNRAI 223 (488)
Q Consensus 160 D~~N~rIrkid-~gg------VttIaGg~~g~~~g~~dG~~~~a~f~~P~-gIa~v--------d~~G~LYVaD~gN~rI 223 (488)
|..+++|++++ ++. +.+++|.. +. .|+.+|....++|+.|. +++ + |.+|+|||+|++|++|
T Consensus 288 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~-~g~~dg~~~~a~~~~P~~gv~-v~~~~y~~~D~~g~lyvaD~~n~~I 364 (430)
T 3tc9_A 288 VVNQHYILRSDYDWKTKRLTTPYIVCGQQ-GA-KDWVDGVGKKARMHAPRQGTF-VKNPAYKGSSDEYDFYFCDRENHCI 364 (430)
T ss_dssp ETTTTEEEEEEEETTTTEECCCEEEEECT-TC-BCCBCEEGGGCBBSSEEEEEE-EECGGGTTSSCCEEEEEEEGGGTEE
T ss_pred ECCCCEEEEEeCCcccccccceEEEeccC-CC-CCCCCCCCcceEeCCCcceEE-EccccccccCCCCeEEEEECCCcEE
Confidence 99999999998 432 56777642 11 35567777888999999 787 5 5679999999999999
Q ss_pred EEEEcCCCceEEec-----------c-------CCCcceEEEEe
Q 011333 224 REIQLHFDDCAYQY-----------G-------SSFPLGIAVLL 249 (488)
Q Consensus 224 rkI~~~g~~~~~~~-----------~-------~g~P~GIav~~ 249 (488)
++|+.+|....... + +..|.||+++.
T Consensus 365 ~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 408 (430)
T 3tc9_A 365 RILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDE 408 (430)
T ss_dssp EEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEET
T ss_pred EEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEEC
Confidence 99998774333221 1 34799999985
No 7
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.66 E-value=1.3e-15 Score=159.85 Aligned_cols=148 Identities=14% Similarity=0.155 Sum_probs=113.4
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCccccc-EEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYI 158 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i-~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYV 158 (488)
+..|.+|++++ +|+|||+|..+++|+++++++ +.+ ..+... + . ...+.+|++|++|+ |||
T Consensus 227 ~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~---g~~~~~~~~~--~-------~-----~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 227 ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT---GTLTEEEVMM--D-------T-----KGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp CSSBCCCEECTTTCCEEECBTTCSEEEEECTTT---CCEEEEEEEC--S-------C-----CSSCEEEEECTTSSEEEE
T ss_pred cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC---CeEEEEEecc--C-------C-----CCCcccEEEeCCCCEEEE
Confidence 56899999999 899999999999999999984 333 333322 1 0 22356899999998 999
Q ss_pred EECCCCEEEEEc-C---CC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEE--------CCCCeEEEEECCCCeE
Q 011333 159 ADTMNMAIRKIS-D---SG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYI--------GSSCSLLVIDRGNRAI 223 (488)
Q Consensus 159 AD~~N~rIrkid-~---gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~v--------d~~G~LYVaD~gN~rI 223 (488)
+|..+++|++++ + +. +.+++|.. +. .|+.+|....++|+.|.+|+++ +.+|+|||+|++|++|
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~-~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I 367 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQH-SS-PGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTV 367 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEECT-TC-CCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEecC-CC-CccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEE
Confidence 999999999988 3 22 35777642 11 4566888889999999999932 8999999999999999
Q ss_pred EEEEcCCCceEEe-----------c-------cCCCcceEEEE
Q 011333 224 REIQLHFDDCAYQ-----------Y-------GSSFPLGIAVL 248 (488)
Q Consensus 224 rkI~~~g~~~~~~-----------~-------~~g~P~GIav~ 248 (488)
++|+++|...... . .+..|.|||++
T Consensus 368 ~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd 410 (433)
T 4hw6_A 368 RVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYD 410 (433)
T ss_dssp EEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEE
Confidence 9999877433221 1 13458889888
No 8
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.62 E-value=1.7e-14 Score=143.36 Aligned_cols=140 Identities=17% Similarity=0.230 Sum_probs=104.3
Q ss_pred CCCCCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEE
Q 011333 79 SKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIY 157 (488)
Q Consensus 79 ~~~l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LY 157 (488)
...+..|.+|+++++|+|||+|..+++|+++++++.. ..+..+... +..|.. ...|+.|++|++|+ +|+||
T Consensus 87 ~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~--~~~g~~-----~~~~~~P~~ia~~~~~g~ly 158 (329)
T 3fvz_A 87 KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRS--MQPGSD-----QNHFCQPTDVAVEPSTGAVF 158 (329)
T ss_dssp TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBT--TBCCCS-----TTCCSSEEEEEECTTTCCEE
T ss_pred CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEeccc--CCCCCC-----ccccCCCcEEEEeCCCCeEE
Confidence 3456789999999999999999999999999998631 133444222 223321 24589999999999 89999
Q ss_pred EEEC-CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC-CeEEEEECCCCeEEEEEcC-CCce
Q 011333 158 IADT-MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS-CSLLVIDRGNRAIREIQLH-FDDC 233 (488)
Q Consensus 158 VAD~-~N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~-G~LYVaD~gN~rIrkI~~~-g~~~ 233 (488)
|+|. .+++|++++ ++.+....+... . .+.+....|..|.+|+ ++++ |+|||+|.++++|+++++. |...
T Consensus 159 v~d~~~~~~I~~~~~~g~~~~~~~~~g-~-----~~~~~~~~~~~p~gia-~d~~~g~l~v~d~~~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 159 VSDGYCNSRIVQFSPSGKFVTQWGEES-S-----GSSPRPGQFSVPHSLA-LVPHLDQLCVADRENGRIQCFKTDTKEFV 231 (329)
T ss_dssp EEECSSCCEEEEECTTSCEEEEECEEC-C-----SSSCCTTEESCEEEEE-EETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred EEeCCCCCeEEEEcCCCCEEEEeccCC-C-----CCCCCCcccCCCcEEE-EECCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 9997 799999999 566544443211 0 1122345789999999 5665 9999999999999999998 5433
No 9
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.62 E-value=1.1e-14 Score=151.29 Aligned_cols=153 Identities=19% Similarity=0.175 Sum_probs=116.6
Q ss_pred CCCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcc-eEEEcC-CCcEE
Q 011333 81 LGIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPK-GLTVDD-RGNIY 157 (488)
Q Consensus 81 ~l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~-GIAvD~-dG~LY 157 (488)
.+..|+++++++ +|.||++|. +++|++++.++ +...++++. +..|. . -..|. +|++++ +|+||
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~---~~~~~~~~~--~~~g~-~-------~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKT---QEVTLIKQL--ELSGS-L-------GTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECT-TCEEEEEETTT---CCEEEEEEC--CCCSC-C-------CCSSCCEEEEETTTTEEE
T ss_pred hcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCC---CCEEEEecc--cccCC-C-------CCCccccEEEeCCCCEEE
Confidence 456899999999 899999886 78999999986 344555443 11111 0 12377 999999 68999
Q ss_pred EEECCCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC-CCCeEEEEE-cCCCceE
Q 011333 158 IADTMNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR-GNRAIREIQ-LHFDDCA 234 (488)
Q Consensus 158 VAD~~N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~-gN~rIrkI~-~~g~~~~ 234 (488)
|+|..+++|++++ ++.+.+++|.... .|..+|....++|+.|.+|+ ++++|+|||+|+ +|++|++|+ ..+....
T Consensus 283 v~d~~~~~I~~~~~~g~~~~~~g~~~~--~g~~dg~~~~~~~~~P~gia-~d~dG~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGECEWFCGSATQ--KTVQDGLREEALFAQPNGMT-VDEDGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp EEETTTTEEEEECTTCCEEEEEECTTC--CSCBCEEGGGCBCSSEEEEE-ECTTCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred EEeCCCCEEEEEecCCCEEEEEeCCCC--CCcCCCcccccEeCCCeEEE-EeCCCCEEEEeCCCCCEEEEEECCCCEEEE
Confidence 9999999999999 6778888875321 45677788889999999999 799999999999 999999999 4443222
Q ss_pred Eecc---------------CCCcceEEEEec
Q 011333 235 YQYG---------------SSFPLGIAVLLA 250 (488)
Q Consensus 235 ~~~~---------------~g~P~GIav~~g 250 (488)
.... +..|.||+++..
T Consensus 360 ~~g~~~~~g~~~g~~~~~~~~~P~giavd~~ 390 (409)
T 3hrp_A 360 VAGQVDVASQIDGTPLEATFNYPYDICYDGE 390 (409)
T ss_dssp EEECTTCBSCCCBSTTTCCBSSEEEEEECSS
T ss_pred EeCCCCCCCcCCCChhceEeCCceEEEEcCC
Confidence 2111 357999999854
No 10
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=4.6e-14 Score=140.29 Aligned_cols=145 Identities=18% Similarity=0.224 Sum_probs=108.3
Q ss_pred CCCCCceEEEEccCCcEEEEECCCC------------------------eEEEEeCCCCcccccEEEecCCCCccccCCC
Q 011333 80 KLGIEPYSVEVLPGGELLILDSANS------------------------NLYRISSSLSLYSRPKLVAGSAEGYSGHVDG 135 (488)
Q Consensus 80 ~~l~~P~GIaVd~dG~LYVaD~~n~------------------------rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG 135 (488)
..+..|.+|+++++|+|||++..++ +|++++.++ +++....+.
T Consensus 21 ~~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~---------- 87 (329)
T 3fvz_A 21 LLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN---AEILQSSGK---------- 87 (329)
T ss_dssp CCCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT---CCEEEEECT----------
T ss_pred eecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC---CeEEeccCC----------
Confidence 3466899999999999999999884 688898864 344333332
Q ss_pred cccccccCCcceEEEcCCCcEEEEECCCCEEEEEc-CCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-C
Q 011333 136 KPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS-DSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-S 210 (488)
Q Consensus 136 ~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rIrkid-~gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~-~ 210 (488)
..|+.|.||++|++|+|||+|..+++|++++ ++. +.++... +. .|. ....|..|.+|+ +++ +
T Consensus 88 ----~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~--~~-~g~-----~~~~~~~P~~ia-~~~~~ 154 (329)
T 3fvz_A 88 ----NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRS--MQ-PGS-----DQNHFCQPTDVA-VEPST 154 (329)
T ss_dssp ----TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBT--TB-CCC-----STTCCSSEEEEE-ECTTT
T ss_pred ----CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEeccc--CC-CCC-----CccccCCCcEEE-EeCCC
Confidence 2378999999999999999999999999999 554 3444321 10 111 134688999999 676 8
Q ss_pred CeEEEEEC-CCCeEEEEEcCCCceEEec-----------cCCCcceEEEEec
Q 011333 211 CSLLVIDR-GNRAIREIQLHFDDCAYQY-----------GSSFPLGIAVLLA 250 (488)
Q Consensus 211 G~LYVaD~-gN~rIrkI~~~g~~~~~~~-----------~~g~P~GIav~~g 250 (488)
|+|||+|. ++++|++++.+|....... ....|.||+++..
T Consensus 155 g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~ 206 (329)
T 3fvz_A 155 GAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH 206 (329)
T ss_dssp CCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETT
T ss_pred CeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECC
Confidence 99999997 8999999998876554432 1235999999843
No 11
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.51 E-value=1.2e-12 Score=130.84 Aligned_cols=133 Identities=16% Similarity=0.100 Sum_probs=103.8
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+..|.||++|. +|+||++|..+++|.+++.++. ...+++.. .+..|+||++|+ +|.||++
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~---------------~~~~P~~iavdp~~g~ly~~ 137 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------NGSKPRAIVVDPVHGFMYWT 137 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEEEEC---------------TTCCEEEEEEETTTTEEEEE
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC---ceEEEEEC---------------CCCCcceEEeCCCCCEEEEE
Confidence 45899999996 7889999999999999999863 23333321 267899999997 7789999
Q ss_pred ECCC-CEEEEEc-CCCcEE-EeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe
Q 011333 160 DTMN-MAIRKIS-DSGVTT-IAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ 236 (488)
Q Consensus 160 D~~N-~rIrkid-~ggVtt-IaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~ 236 (488)
|..+ ++|.+++ +|.... +... .+..|++|++....+.||++|+.+++|.+++++|......
T Consensus 138 d~~~~~~I~~~~~dG~~~~~~~~~----------------~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 138 DWGTPAKIKKGGLNGVDIYSLVTE----------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp ECSSSCEEEEEETTSCCEEEEECS----------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ccCCCCeEEEEcCCCCCeEEEEEC----------------CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 9986 8999999 665433 3321 3678999995446889999999999999999998644332
Q ss_pred ----ccCCCcceEEEE
Q 011333 237 ----YGSSFPLGIAVL 248 (488)
Q Consensus 237 ----~~~g~P~GIav~ 248 (488)
.....|.||+++
T Consensus 202 ~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 202 LEDEKRLAHPFSLAVF 217 (316)
T ss_dssp EECTTTTSSEEEEEEE
T ss_pred eecCCccCCcEEEEEE
Confidence 234679999997
No 12
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.50 E-value=4.5e-13 Score=136.16 Aligned_cols=135 Identities=18% Similarity=0.149 Sum_probs=105.2
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+..|.||++|. +|+||++|..+++|.+++.+|. ...+++. ..|..|+||++|+ +|.||++
T Consensus 115 ~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---~~~~l~~---------------~~l~~P~~iavdp~~g~ly~t 176 (349)
T 3v64_C 115 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---HRKVLLW---------------QSLEKPRAIALHPMEGTIYWT 176 (349)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEEC---------------TTCSCEEEEEEETTTTEEEEE
T ss_pred CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC---ceEEEEe---------------CCCCCcceEEEecCcCeEEEe
Confidence 45899999996 7889999999999999999863 2233322 1278899999997 7789999
Q ss_pred ECCC-CEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE--
Q 011333 160 DTMN-MAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY-- 235 (488)
Q Consensus 160 D~~N-~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~-- 235 (488)
|..+ ++|.+++ +|...+.... ..+..|++|++...++.||++|+++++|++++++|.....
T Consensus 177 d~~~~~~I~r~~~dG~~~~~~~~---------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~ 241 (349)
T 3v64_C 177 DWGNTPRIEASSMDGSGRRIIAD---------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI 241 (349)
T ss_dssp ECSSSCEEEEEETTSCSCEESCC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ccCCCCEEEEEeCCCCCcEEEEE---------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEE
Confidence 9998 9999999 6554333211 1367899999544789999999999999999999864432
Q ss_pred eccCCCcceEEEEe
Q 011333 236 QYGSSFPLGIAVLL 249 (488)
Q Consensus 236 ~~~~g~P~GIav~~ 249 (488)
....+.|.||+++.
T Consensus 242 ~~~~~~P~giav~~ 255 (349)
T 3v64_C 242 SQGLPHPFAITVFE 255 (349)
T ss_dssp CSSCSSEEEEEEET
T ss_pred eCCCCCceEEEEEC
Confidence 34567899999953
No 13
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.50 E-value=5.4e-13 Score=134.42 Aligned_cols=134 Identities=15% Similarity=0.102 Sum_probs=105.1
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+..|.||++|. +|+||++|..+++|.+++++|. ...++... .+..|+||++|+ .|.||++
T Consensus 78 l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---~~~~l~~~---------------~~~~P~giavdp~~g~ly~t 139 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS---LRKVLFWQ---------------ELDQPRAIALDPSSGFMYWT 139 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECS---------------SCSSEEEEEEEGGGTEEEEE
T ss_pred CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC---cEEEEEeC---------------CCCCccEEEEeCCCCEEEEE
Confidence 45899999996 7889999999999999999863 23333321 278899999997 6899999
Q ss_pred ECC-CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe
Q 011333 160 DTM-NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ 236 (488)
Q Consensus 160 D~~-N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~ 236 (488)
|.. +++|.+++ +|. ..++... .+..|++|++...++.||++|+.+++|++++++|......
T Consensus 140 d~~~~~~I~r~~~dG~~~~~~~~~----------------~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 140 DWGEVPKIERAGMDGSSRFIIINS----------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECS----------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ecCCCCEEEEEEcCCCCeEEEEEC----------------CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 976 79999999 555 3444321 2678999995446899999999999999999998654332
Q ss_pred --ccCCCcceEEEEe
Q 011333 237 --YGSSFPLGIAVLL 249 (488)
Q Consensus 237 --~~~g~P~GIav~~ 249 (488)
.....|.||+++.
T Consensus 204 ~~~~~~~P~glav~~ 218 (318)
T 3sov_A 204 VKGSLPHPFALTLFE 218 (318)
T ss_dssp ECSCCSCEEEEEEET
T ss_pred ecCCCCCceEEEEeC
Confidence 2467899999974
No 14
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.50 E-value=5.6e-13 Score=138.19 Aligned_cols=134 Identities=16% Similarity=0.108 Sum_probs=105.0
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+..|.|||+|. +++||++|..+++|.+++++|. ...+++.. .|..|+||++|+ .|.||++
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~---~~~~l~~~---------------~~~~P~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------NGSKPRAIVVDPVHGFMYWT 219 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC---SEEEEEEC---------------SSCCEEEEEEETTTTEEEEE
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCC---ceEEEEeC---------------CCCCcceEEEecccCeEEEE
Confidence 55899999997 7899999999999999999963 23344321 278899999998 6789999
Q ss_pred ECC-CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe
Q 011333 160 DTM-NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ 236 (488)
Q Consensus 160 D~~-N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~ 236 (488)
|.+ +++|.+++ +|. ..++... .|..|++|++....++||++|+.+++|++++++|......
T Consensus 220 d~~~~~~I~~~~~dG~~~~~~~~~----------------~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 220 DWGTPAKIKKGGLNGVDIYSLVTE----------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp ECSSSCCEEEEETTSCSCEEEECS----------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred eCCCCCEEEEEeCCCCccEEEEEC----------------CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 987 58999999 555 4444321 3678999995447899999999999999999998654432
Q ss_pred -c---cCCCcceEEEEe
Q 011333 237 -Y---GSSFPLGIAVLL 249 (488)
Q Consensus 237 -~---~~g~P~GIav~~ 249 (488)
. ....|.||+++.
T Consensus 284 ~~~~~~l~~P~gl~v~~ 300 (400)
T 3p5b_L 284 LEDEKRLAHPFSLAVFE 300 (400)
T ss_dssp EECSSTTSSEEEEEEET
T ss_pred EeCCCCCCCCEEEEEeC
Confidence 2 346799999864
No 15
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.46 E-value=4e-12 Score=122.17 Aligned_cols=133 Identities=17% Similarity=0.220 Sum_probs=101.4
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+..|.+|++++ +|.||++|..+++|.+++.++. ....+... .+..|++|++|+ .|.|||+
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~~---------------~~~~P~~i~vd~~~g~lyv~ 139 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT---QRRVLFDT---------------GLVNPRGIVTDPVRGNLYWT 139 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECS---------------SCSSEEEEEEETTTTEEEEE
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC---CEEEEEEC---------------CCCCccEEEEeeCCCEEEEE
Confidence 45899999998 5789999999999999999863 22333221 167899999999 6889999
Q ss_pred ECC--CCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE-
Q 011333 160 DTM--NMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA- 234 (488)
Q Consensus 160 D~~--N~rIrkid-~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~- 234 (488)
|.. +++|.+++ ++.. .++... .+..|++|++....+.|||+|+++++|+++++++....
T Consensus 140 ~~~~~~~~I~~~~~dg~~~~~~~~~----------------~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 203 (267)
T 1npe_A 140 DWNRDNPKIETSHMDGTNRRILAQD----------------NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK 203 (267)
T ss_dssp ECCSSSCEEEEEETTSCCCEEEECT----------------TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE
T ss_pred ECCCCCcEEEEEecCCCCcEEEEEC----------------CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE
Confidence 987 68999998 5553 333311 25689999954346799999999999999999864332
Q ss_pred EeccCCCcceEEEE
Q 011333 235 YQYGSSFPLGIAVL 248 (488)
Q Consensus 235 ~~~~~g~P~GIav~ 248 (488)
.......|.||+++
T Consensus 204 ~~~~~~~P~gi~~d 217 (267)
T 1npe_A 204 VLEGLQYPFAVTSY 217 (267)
T ss_dssp EEECCCSEEEEEEE
T ss_pred EecCCCCceEEEEe
Confidence 23455689999987
No 16
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.46 E-value=3.9e-12 Score=129.23 Aligned_cols=135 Identities=15% Similarity=0.137 Sum_probs=106.4
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+.+|.+|++++ ++.||++|..+++|++++++++ ....++.. .+..|.|||+|. .|+||++
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~---------------~~~~p~glavd~~~g~ly~~ 133 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVST---------------GLESPGGLAVDWVHDKLYWT 133 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECS---------------SCSCCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCC---CceEEEeC---------------CCCCccEEEEecCCCeEEEE
Confidence 45799999995 7889999999999999999873 33444322 167899999996 7899999
Q ss_pred ECCCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-CeEEEEEcCCCceEEe
Q 011333 160 DTMNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-RAIREIQLHFDDCAYQ 236 (488)
Q Consensus 160 D~~N~rIrkid-~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN-~rIrkI~~~g~~~~~~ 236 (488)
|..+++|.+++ +|.. .++.. ..+..|.+|++.+..|.||++|+++ ++|.+++++|......
T Consensus 134 d~~~~~I~~~~~dG~~~~~l~~----------------~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 197 (349)
T 3v64_C 134 DSGTSRIEVANLDGAHRKVLLW----------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 197 (349)
T ss_dssp ETTTTEEEEEETTSCSCEEEEC----------------TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES
T ss_pred cCCCCeEEEEcCCCCceEEEEe----------------CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 99999999999 5553 34332 1367899999444589999999998 9999999998655443
Q ss_pred --ccCCCcceEEEEec
Q 011333 237 --YGSSFPLGIAVLLA 250 (488)
Q Consensus 237 --~~~g~P~GIav~~g 250 (488)
.....|.||+++..
T Consensus 198 ~~~~~~~PnGla~d~~ 213 (349)
T 3v64_C 198 ADTHLFWPNGLTIDYA 213 (349)
T ss_dssp CCSSCSCEEEEEEETT
T ss_pred EECCCCCcceEEEeCC
Confidence 45668999999954
No 17
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.46 E-value=8.4e-13 Score=135.95 Aligned_cols=134 Identities=19% Similarity=0.156 Sum_probs=105.4
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+..|.||++|+ +|.||++|..+++|.+++.++. ...+++.. .|..|+||++|+ +|.||++
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~---~~~~l~~~---------------~l~~P~giavdp~~g~ly~t 219 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---HRKVLLWQ---------------SLEKPRAIALHPMEGTIYWT 219 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC---SCEEEECS---------------SCSCEEEEEEETTTTEEEEE
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC---ceEEeecC---------------CCCCCcEEEEEcCCCeEEEe
Confidence 45899999996 7889999999999999999863 23333321 278899999996 6789999
Q ss_pred ECCC-CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE-
Q 011333 160 DTMN-MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY- 235 (488)
Q Consensus 160 D~~N-~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~- 235 (488)
|..+ ++|.+++ +|. ..++... .+..|++|++....++|||+|+.+++|++++++|.....
T Consensus 220 d~~~~~~I~r~~~dG~~~~~~~~~----------------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 220 DWGNTPRIEASSMDGSGRRIIADT----------------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECS----------------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEE
T ss_pred ccCCCCEEEEEeCCCCCcEEEEEC----------------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEE
Confidence 9998 9999999 555 3444321 266899999544789999999999999999999864432
Q ss_pred -eccCCCcceEEEEe
Q 011333 236 -QYGSSFPLGIAVLL 249 (488)
Q Consensus 236 -~~~~g~P~GIav~~ 249 (488)
..+.+.|.||+++.
T Consensus 284 ~~~~~~~P~giav~~ 298 (386)
T 3v65_B 284 ISQGLPHPFAITVFE 298 (386)
T ss_dssp ECSSCSSEEEEEEET
T ss_pred EECCCCCceEEEEEC
Confidence 34567899999953
No 18
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.44 E-value=4e-12 Score=122.12 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=102.3
Q ss_pred CceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC-CcEEEEEC
Q 011333 84 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d-G~LYVAD~ 161 (488)
+|+++++++ ++.||++|..+++|++++.++. .+..+... .+..|.+|++|++ |+|||+|.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~---------------~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGG---EPTTIIRQ---------------DLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSC---CCEEEECT---------------TCCCEEEEEEETTTTEEEEEET
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCC---CcEEEEEC---------------CCCCccEEEEEecCCeEEEEEC
Confidence 799999998 5789999999999999999863 23333321 2678999999984 78999999
Q ss_pred CCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEEEECC--CCeEEEEEcCCCceEEe
Q 011333 162 MNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLVIDRG--NRAIREIQLHFDDCAYQ 236 (488)
Q Consensus 162 ~N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~-~G~LYVaD~g--N~rIrkI~~~g~~~~~~ 236 (488)
.+++|.+++ ++. ..++... .+..|.+|+ +++ .+.|||+|.+ +++|.++++++......
T Consensus 99 ~~~~I~~~~~~g~~~~~~~~~----------------~~~~P~~i~-vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 99 QLDRIEVAKMDGTQRRVLFDT----------------GLVNPRGIV-TDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp TTTEEEEEETTSCSCEEEECS----------------SCSSEEEEE-EETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred CCCEEEEEEcCCCCEEEEEEC----------------CCCCccEEE-EeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 999999999 554 3444321 256899999 565 7999999987 78999999988654332
Q ss_pred --ccCCCcceEEEEec
Q 011333 237 --YGSSFPLGIAVLLA 250 (488)
Q Consensus 237 --~~~g~P~GIav~~g 250 (488)
.....|.||+++..
T Consensus 162 ~~~~~~~P~gia~d~~ 177 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAF 177 (267)
T ss_dssp ECTTCSCEEEEEEETT
T ss_pred EECCCCCCcEEEEcCC
Confidence 34568999999853
No 19
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.44 E-value=3.5e-12 Score=131.32 Aligned_cols=135 Identities=15% Similarity=0.142 Sum_probs=106.6
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+..|.||++++ ++.||++|..+++|+++++++. .+..++.. .+..|.|||+|. .|+||++
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~---------------~~~~p~glavd~~~g~lY~~ 176 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVST---------------GLESPGGLAVDWVHDKLYWT 176 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CEEEEECS---------------SCSCCCCEEEETTTTEEEEE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---CcEEEEeC---------------CCCCccEEEEEeCCCeEEEE
Confidence 45899999995 7889999999999999999863 34444332 167899999996 6799999
Q ss_pred ECCCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-CeEEEEEcCCCceEE-
Q 011333 160 DTMNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-RAIREIQLHFDDCAY- 235 (488)
Q Consensus 160 D~~N~rIrkid-~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN-~rIrkI~~~g~~~~~- 235 (488)
|..+++|.+++ ++.. .++... .|..|.+|++.+..|.||++|.++ ++|++++++|.....
T Consensus 177 d~~~~~I~~~~~dg~~~~~l~~~----------------~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 240 (386)
T 3v65_B 177 DSGTSRIEVANLDGAHRKVLLWQ----------------SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 240 (386)
T ss_dssp ETTTTEEEECBTTSCSCEEEECS----------------SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred cCCCCeEEEEeCCCCceEEeecC----------------CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 99999999999 5553 444321 367899999544689999999998 999999999865543
Q ss_pred -eccCCCcceEEEEec
Q 011333 236 -QYGSSFPLGIAVLLA 250 (488)
Q Consensus 236 -~~~~g~P~GIav~~g 250 (488)
..+...|.||+++..
T Consensus 241 ~~~~~~~PnGlavd~~ 256 (386)
T 3v65_B 241 ADTHLFWPNGLTIDYA 256 (386)
T ss_dssp ECSSCSCEEEEEEEGG
T ss_pred EECCCCCeeeEEEeCC
Confidence 345667999999843
No 20
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.44 E-value=3.4e-12 Score=127.55 Aligned_cols=134 Identities=19% Similarity=0.224 Sum_probs=99.0
Q ss_pred CCCCceEEEEcc-CCcEEEEECCC-CeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEE
Q 011333 81 LGIEPYSVEVLP-GGELLILDSAN-SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIY 157 (488)
Q Consensus 81 ~l~~P~GIaVd~-dG~LYVaD~~n-~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LY 157 (488)
.+..|.+|++|+ +|.||++|.++ ++|.+++++|. ...+++.. .+..|+||++|+ ++.||
T Consensus 118 ~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~---~~~~~~~~---------------~~~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 118 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---DIYSLVTE---------------NIQWPNGITLDLLSGRLY 179 (316)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---CEEEEECS---------------SCSCEEEEEEETTTTEEE
T ss_pred CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC---CeEEEEEC---------------CCCCceEEEEeccCCEEE
Confidence 356899999997 78899999886 89999999863 22233221 278899999996 56899
Q ss_pred EEECCCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEc-CCCceE
Q 011333 158 IADTMNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQL-HFDDCA 234 (488)
Q Consensus 158 VAD~~N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~-~g~~~~ 234 (488)
++|..+++|.+++ +|. ..+++... ..+..|.+|+ ++ .+.||++|+++++|.+++. .|....
T Consensus 180 ~~D~~~~~I~~~d~dg~~~~~~~~~~--------------~~~~~P~gia-v~-~~~ly~~d~~~~~V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 180 WVDSKLHSISSIDVNGGNRKTILEDE--------------KRLAHPFSLA-VF-EDKVFWTDIINEAIFSANRLTGSDVN 243 (316)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEECT--------------TTTSSEEEEE-EE-TTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred EEECCCCeEEEEecCCCceEEEeecC--------------CccCCcEEEE-EE-CCEEEEEECCCCeEEEEeCCCCcceE
Confidence 9999999999999 554 55554321 1366899999 55 5899999999999999997 444332
Q ss_pred -EeccCCCcceEEEE
Q 011333 235 -YQYGSSFPLGIAVL 248 (488)
Q Consensus 235 -~~~~~g~P~GIav~ 248 (488)
...+...|.||++.
T Consensus 244 ~i~~~~~~p~~i~v~ 258 (316)
T 1ijq_A 244 LLAENLLSPEDMVLF 258 (316)
T ss_dssp EEECSCSCCCCEEEE
T ss_pred EEecCCCCceEEEEe
Confidence 22333456666654
No 21
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.43 E-value=2.2e-12 Score=145.39 Aligned_cols=134 Identities=16% Similarity=0.101 Sum_probs=103.5
Q ss_pred CCCCceEEEEccC-CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC-CcEEE
Q 011333 81 LGIEPYSVEVLPG-GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYI 158 (488)
Q Consensus 81 ~l~~P~GIaVd~d-G~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d-G~LYV 158 (488)
.+..|.|||||.. ++||++|..+++|.+++++|. ...+++.. .|..|+|||||+. |.||+
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~---~~~~l~~~---------------~l~~P~gIaVDp~~g~LYw 530 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------NGSKPRAIVVDPVHGFMYW 530 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEEEEC---------------TTCCEEEEEEETTTTEEEE
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC---eEEEEEeC---------------CCCCcceEEEecCCCCEEE
Confidence 3568999999974 589999999999999999963 33444322 2778999999984 89999
Q ss_pred EECCC-CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE
Q 011333 159 ADTMN-MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY 235 (488)
Q Consensus 159 AD~~N-~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~ 235 (488)
+|.++ ++|.+++ +|. +.++... .|..|++|++....++|||+|+++++|++++++|.....
T Consensus 531 tD~g~~~~I~~~~~dG~~~~~lv~~----------------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~ 594 (791)
T 3m0c_C 531 TDWGTPAKIKKGGLNGVDIYSLVTE----------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 594 (791)
T ss_dssp EECSSSCEEEEEETTSCCEEEEECS----------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ecCCCCCeEEEEecCCCceEEEEeC----------------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEE
Confidence 99886 8999999 555 3444321 367999999544789999999999999999999865543
Q ss_pred ec----cCCCcceEEEE
Q 011333 236 QY----GSSFPLGIAVL 248 (488)
Q Consensus 236 ~~----~~g~P~GIav~ 248 (488)
.. ....|.||++.
T Consensus 595 v~~~~~~l~~P~glav~ 611 (791)
T 3m0c_C 595 ILEDEKRLAHPFSLAVF 611 (791)
T ss_dssp EEECTTTTSSEEEEEEE
T ss_pred EecCCCccCCCCEEEEe
Confidence 22 23467777775
No 22
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.42 E-value=5.5e-12 Score=127.05 Aligned_cols=132 Identities=19% Similarity=0.197 Sum_probs=100.2
Q ss_pred CCCCceEEEEcc-CCcEEEEECC-CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEE
Q 011333 81 LGIEPYSVEVLP-GGELLILDSA-NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIY 157 (488)
Q Consensus 81 ~l~~P~GIaVd~-dG~LYVaD~~-n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LY 157 (488)
.+..|.||++|+ +|.||++|.+ +++|++++++|. ...+++.. .+..|+|||+|+ +++||
T Consensus 120 ~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---~~~~~~~~---------------~l~~Pnglavd~~~~~lY 181 (318)
T 3sov_A 120 ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS---SRFIIINS---------------EIYWPNGLTLDYEEQKLY 181 (318)
T ss_dssp SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC---SCEEEECS---------------SCSCEEEEEEETTTTEEE
T ss_pred CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC---CeEEEEEC---------------CCCCccEEEEeccCCEEE
Confidence 466899999997 6889999975 799999999863 23333321 278899999997 67899
Q ss_pred EEECCCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC-CCce-
Q 011333 158 IADTMNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH-FDDC- 233 (488)
Q Consensus 158 VAD~~N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~-g~~~- 233 (488)
++|+.+++|.+++ +|. ..+++.+ .+..|.+|+ ++ .+.||++|+++++|.++++. |...
T Consensus 182 ~aD~~~~~I~~~d~dG~~~~~~~~~----------------~~~~P~gla-v~-~~~lywtd~~~~~V~~~~~~~G~~~~ 243 (318)
T 3sov_A 182 WADAKLNFIHKSNLDGTNRQAVVKG----------------SLPHPFALT-LF-EDILYWTDWSTHSILACNKYTGEGLR 243 (318)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECS----------------CCSCEEEEE-EE-TTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred EEECCCCEEEEEcCCCCceEEEecC----------------CCCCceEEE-Ee-CCEEEEEecCCCeEEEEECCCCCceE
Confidence 9999999999999 554 4555421 266899999 55 57999999999999999984 4432
Q ss_pred EEeccCCCcceEEEE
Q 011333 234 AYQYGSSFPLGIAVL 248 (488)
Q Consensus 234 ~~~~~~g~P~GIav~ 248 (488)
........|.+|++.
T Consensus 244 ~i~~~~~~P~~i~v~ 258 (318)
T 3sov_A 244 EIHSDIFSPMDIHAF 258 (318)
T ss_dssp EEECCCSSCCCEEEE
T ss_pred EEeCCCCCCcEEEEe
Confidence 333444567777664
No 23
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.42 E-value=8.7e-12 Score=119.64 Aligned_cols=136 Identities=16% Similarity=0.288 Sum_probs=103.6
Q ss_pred CCCceEEEE-ccCCcEEEEECC-CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEE
Q 011333 82 GIEPYSVEV-LPGGELLILDSA-NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaV-d~dG~LYVaD~~-n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVA 159 (488)
+..|.+|++ +++|+|||++.. +++|++++.++ ......+. ..+..|.+|++|++|+|||+
T Consensus 76 ~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g----~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~ 137 (286)
T 1q7f_A 76 LLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG----QFVRKFGA--------------TILQHPRGVTVDNKGRIIVV 137 (286)
T ss_dssp BSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS----CEEEEECT--------------TTCSCEEEEEECTTSCEEEE
T ss_pred ccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCC----cEEEEecC--------------ccCCCceEEEEeCCCCEEEE
Confidence 458999999 579999999975 78999999775 22222221 12668999999999999999
Q ss_pred ECCCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEecc
Q 011333 160 DTMNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQYG 238 (488)
Q Consensus 160 D~~N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~~~ 238 (488)
|..+++|++++ ++.+....+.. ..+..|.+|+ ++++|+|||+|..+++|++++..+........
T Consensus 138 ~~~~~~i~~~~~~g~~~~~~~~~--------------~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~ 202 (286)
T 1q7f_A 138 ECKVMRVIIFDQNGNVLHKFGCS--------------KHLEFPNGVV-VNDKQEIFISDNRAHCVKVFNYEGQYLRQIGG 202 (286)
T ss_dssp ETTTTEEEEECTTSCEEEEEECT--------------TTCSSEEEEE-ECSSSEEEEEEGGGTEEEEEETTCCEEEEESC
T ss_pred ECCCCEEEEEcCCCCEEEEeCCC--------------CccCCcEEEE-ECCCCCEEEEECCCCEEEEEcCCCCEEEEEcc
Confidence 99999999999 55543322211 1356799999 78999999999999999999998765444322
Q ss_pred ---CCCcceEEEEec
Q 011333 239 ---SSFPLGIAVLLA 250 (488)
Q Consensus 239 ---~g~P~GIav~~g 250 (488)
...|.+|+++..
T Consensus 203 ~g~~~~p~~i~~d~~ 217 (286)
T 1q7f_A 203 EGITNYPIGVGINSN 217 (286)
T ss_dssp TTTSCSEEEEEECTT
T ss_pred CCccCCCcEEEECCC
Confidence 357999999853
No 24
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.40 E-value=6.6e-12 Score=137.72 Aligned_cols=135 Identities=12% Similarity=0.094 Sum_probs=107.0
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+..|.|||+|. .++||++|..+++|.+++.+|. ...+++.. .|+.|++||+|+ +|.||++
T Consensus 391 ~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~---~~~~l~~~---------------~l~~P~~iavdp~~G~ly~t 452 (619)
T 3s94_A 391 IAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT---MRKILISE---------------DLEEPRAIVLDPMVGYMYWT 452 (619)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECT---------------TCCSEEEEEEETTTTEEEEE
T ss_pred CCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC---eEEEEEEC---------------CCCCeeeEEEEcCCCcEEEe
Confidence 56899999996 7889999999999999999873 23444321 288999999998 5999999
Q ss_pred ECCC-CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE-
Q 011333 160 DTMN-MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY- 235 (488)
Q Consensus 160 D~~N-~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~- 235 (488)
|.++ .+|.+++ +|. ..++... .|..|+||++...+++||++|+++++|++++++|.....
T Consensus 453 D~g~~~~I~r~~~dG~~~~~l~~~----------------~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~ 516 (619)
T 3s94_A 453 DWGEIPKIERAALDGSDRVVLVNT----------------SLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVL 516 (619)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECS----------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE
T ss_pred cCCCCCEEEEEccCCCccEEEEeC----------------CCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 9875 8999998 655 3444321 377999999544689999999999999999999875543
Q ss_pred -eccCCCcceEEEEec
Q 011333 236 -QYGSSFPLGIAVLLA 250 (488)
Q Consensus 236 -~~~~g~P~GIav~~g 250 (488)
......|.||++..+
T Consensus 517 ~~~~l~~P~glav~~~ 532 (619)
T 3s94_A 517 VEDKIPHIFGFTLLGD 532 (619)
T ss_dssp EECCCCSSCCEEEETT
T ss_pred eccCCCCcEEEEEECC
Confidence 345678999998743
No 25
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.40 E-value=9e-12 Score=129.12 Aligned_cols=139 Identities=17% Similarity=0.105 Sum_probs=105.0
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCc-ccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSL-YSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYI 158 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~-~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYV 158 (488)
+..|.+|++++ ++.||++|..+++|++++.++.. .+...+++.. .+..|.|||+|. .++||+
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~---------------~~~~p~glavD~~~~~lY~ 175 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR---------------DIQAPDGLAVDWIHSNIYW 175 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS---------------SCSCEEEEEEETTTTEEEE
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC---------------CCCCcccEEEEecCCceEE
Confidence 55899999997 68899999999999999988521 0123334332 277899999997 789999
Q ss_pred EECCCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC-CCeEEEEEcCCCceEE
Q 011333 159 ADTMNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-NRAIREIQLHFDDCAY 235 (488)
Q Consensus 159 AD~~N~rIrkid-~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-N~rIrkI~~~g~~~~~ 235 (488)
+|..+++|.+++ +++. .++... .+..|.+|++.+..|.||++|.+ +++|++++++|.....
T Consensus 176 ~d~~~~~I~~~~~~g~~~~~l~~~----------------~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 176 TDSVLGTVSVADTKGVKRKTLFRE----------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp EETTTTEEEEECTTTCSEEEEEEC----------------SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred EECCCCeEEEEeCCCCceEEEEeC----------------CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 999999999999 6653 444321 36789999944458999999987 5899999999865543
Q ss_pred --eccCCCcceEEEEecC
Q 011333 236 --QYGSSFPLGIAVLLAA 251 (488)
Q Consensus 236 --~~~~g~P~GIav~~g~ 251 (488)
......|.||+++...
T Consensus 240 ~~~~~l~~P~glavd~~~ 257 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLS 257 (400)
T ss_dssp EECSSCSCEEEEEEETTT
T ss_pred EEECCCCceEEEEEEeCC
Confidence 3455789999999543
No 26
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.40 E-value=1.5e-11 Score=118.04 Aligned_cols=141 Identities=15% Similarity=0.186 Sum_probs=105.4
Q ss_pred CCCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEE-cCCCcEEEE
Q 011333 81 LGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV-DDRGNIYIA 159 (488)
Q Consensus 81 ~l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAv-D~dG~LYVA 159 (488)
.+..|.+|+++++|+|||+|..+++|+++++++. .+..+ +.. +. ....+..|.+|++ +++|+|||+
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~---~~~~~-~~~----~~-----~~~~~~~p~~i~~~~~~g~l~v~ 94 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR---FKFQF-GEC----GK-----RDSQLLYPNRVAVVRNSGDIIVT 94 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC---EEEEE-CCB----SS-----STTCBSSEEEEEEETTTTEEEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCCc---EEEEe-ccc----CC-----CcccccCceEEEEEcCCCeEEEE
Confidence 3558999999999999999999999999998852 22233 221 11 1134788999999 589999999
Q ss_pred ECC-CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe-
Q 011333 160 DTM-NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ- 236 (488)
Q Consensus 160 D~~-N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~- 236 (488)
|.. +++|++++ ++.+....+. ..+..|.+|+ ++++|+|||+|..+++|++++..+......
T Consensus 95 ~~~~~~~i~~~d~~g~~~~~~~~---------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~ 158 (286)
T 1q7f_A 95 ERSPTHQIQIYNQYGQFVRKFGA---------------TILQHPRGVT-VDNKGRIIVVECKVMRVIIFDQNGNVLHKFG 158 (286)
T ss_dssp ECGGGCEEEEECTTSCEEEEECT---------------TTCSCEEEEE-ECTTSCEEEEETTTTEEEEECTTSCEEEEEE
T ss_pred cCCCCCEEEEECCCCcEEEEecC---------------ccCCCceEEE-EeCCCCEEEEECCCCEEEEEcCCCCEEEEeC
Confidence 975 89999999 5554322221 1256799999 788999999999999999999887654433
Q ss_pred --ccCCCcceEEEEec
Q 011333 237 --YGSSFPLGIAVLLA 250 (488)
Q Consensus 237 --~~~g~P~GIav~~g 250 (488)
.....|.+|+++..
T Consensus 159 ~~~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 159 CSKHLEFPNGVVVNDK 174 (286)
T ss_dssp CTTTCSSEEEEEECSS
T ss_pred CCCccCCcEEEEECCC
Confidence 23356899999854
No 27
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=5.4e-12 Score=119.28 Aligned_cols=134 Identities=22% Similarity=0.315 Sum_probs=102.3
Q ss_pred CCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 82 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
+..|.+|+++++|+|||++. +++|+++++++. ....+.. ..+..|.+|++|++|+|||+|.
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~---~~~~~~~---------------~~~~~p~~i~~~~~g~l~v~~~ 126 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN---NQTVLPF---------------DGLNYPEGLAVDTQGAVYVADR 126 (270)
T ss_dssp CCSCCCEEECTTCCEEEEET-TTEEEEECTTCS---CCEECCC---------------CSCSSEEEEEECTTCCEEEEEG
T ss_pred cCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc---eEeeeec---------------CCcCCCcceEECCCCCEEEEEC
Confidence 45899999999999999998 889999998863 2222211 1156799999999999999999
Q ss_pred CCCEEEEEcCCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe--cc
Q 011333 162 MNMAIRKISDSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ--YG 238 (488)
Q Consensus 162 ~N~rIrkid~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~--~~ 238 (488)
.+++|.+++.+. ...... ...+..|.+|+ ++++|+|||+|.++++|.+++..+...... ..
T Consensus 127 ~~~~i~~~~~~~~~~~~~~---------------~~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~ 190 (270)
T 1rwi_B 127 GNNRVVKLAAGSKTQTVLP---------------FTGLNDPDGVA-VDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD 190 (270)
T ss_dssp GGTEEEEECTTCCSCEECC---------------CCSCCSCCCEE-ECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS
T ss_pred CCCEEEEEECCCceeEeec---------------cccCCCceeEE-EeCCCCEEEEECCCCEEEEEecCCCceEeecccC
Confidence 999999998544 222211 11256799999 788999999999999999999987655432 23
Q ss_pred CCCcceEEEEec
Q 011333 239 SSFPLGIAVLLA 250 (488)
Q Consensus 239 ~g~P~GIav~~g 250 (488)
...|.+|+++..
T Consensus 191 ~~~p~~i~~d~~ 202 (270)
T 1rwi_B 191 ITAPWGIAVDEA 202 (270)
T ss_dssp CCSEEEEEECTT
T ss_pred CCCceEEEECCC
Confidence 367889998843
No 28
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.38 E-value=1e-11 Score=139.97 Aligned_cols=140 Identities=18% Similarity=0.101 Sum_probs=105.2
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcc-cccEEEecCCCCccccCCCcccccccCCcceEEEcCCC-cEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLY-SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYI 158 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~-g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~LYV 158 (488)
+..|.+|+++. ++.||++|..+++|++++.++... +...+++.. .|..|.|||||..+ +||+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~---------------~l~~P~GLAvD~~~~~LY~ 487 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR---------------DIQAPDGLAVDWIHSNIYW 487 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS---------------SCSCCCEEEEETTTTEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec---------------CCCCcceeeeeecCCcEEE
Confidence 55899999997 788999999999999999885211 123344432 27889999999755 8999
Q ss_pred EECCCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-CeEEEEEcCCCceEE
Q 011333 159 ADTMNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-RAIREIQLHFDDCAY 235 (488)
Q Consensus 159 AD~~N~rIrkid-~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN-~rIrkI~~~g~~~~~ 235 (488)
+|..+++|++++ +|.. .+++.. .|..|.+||+.+..|.||++|+++ ++|++++++|.....
T Consensus 488 tD~~~~~I~v~~ldG~~~~~l~~~----------------~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 488 TDSVLGTVSVADTKGVKRKTLFRE----------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp EETTTTEEEEEETTSSSEEEEEEC----------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred EecCCCeEEEEeCCCCeEEEEEeC----------------CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 999999999999 6664 444321 366899999544569999999987 899999999876543
Q ss_pred e--ccCCCcceEEEEecCC
Q 011333 236 Q--YGSSFPLGIAVLLAAG 252 (488)
Q Consensus 236 ~--~~~g~P~GIav~~g~g 252 (488)
. .....|.||+++...+
T Consensus 552 lv~~~l~~P~GLavD~~~~ 570 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSG 570 (791)
T ss_dssp EECSSCSCEEEEEEETTTT
T ss_pred EEeCCCCCceEEEEecCCC
Confidence 3 3456899999995433
No 29
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.38 E-value=9.6e-12 Score=136.70 Aligned_cols=133 Identities=14% Similarity=0.117 Sum_probs=105.4
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+..|.|||+|. .|+||++|..+++|.+++.+|. ...+++.. .|..|++||+|+ +|.||++
T Consensus 79 ~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~---~~~~l~~~---------------~l~~P~~iavdp~~G~lY~t 140 (628)
T 4a0p_A 79 LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ---HRQVLVWK---------------DLDSPRALALDPAEGFMYWT 140 (628)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTST---TCEEEECS---------------SCCCEEEEEEETTTTEEEEE
T ss_pred CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCC---cEEEEEeC---------------CCCCcccEEEccCCCeEEEe
Confidence 35799999996 6789999999999999999863 23344321 278899999997 7899999
Q ss_pred ECC-CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE-
Q 011333 160 DTM-NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY- 235 (488)
Q Consensus 160 D~~-N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~- 235 (488)
|.+ +.+|.+++ +|. +.+++. .+..|+||++....++||++|.++++|++++++|.....
T Consensus 141 D~g~~~~I~r~~~dG~~~~~l~~-----------------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~ 203 (628)
T 4a0p_A 141 EWGGKPKIDRAAMDGSERTTLVP-----------------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVI 203 (628)
T ss_dssp ECSSSCEEEEEETTSCSCEEEEC-----------------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCCCCEEEEEeCCCCceEEEEC-----------------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEe
Confidence 987 78999999 555 555542 256899999544579999999999999999999854433
Q ss_pred eccCCCcceEEEEe
Q 011333 236 QYGSSFPLGIAVLL 249 (488)
Q Consensus 236 ~~~~g~P~GIav~~ 249 (488)
......|.|++++.
T Consensus 204 ~~~l~~P~glav~~ 217 (628)
T 4a0p_A 204 ADDLPHPFGLTQYQ 217 (628)
T ss_dssp EECCSCEEEEEEET
T ss_pred eccCCCceEEEEEC
Confidence 34566899999984
No 30
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.38 E-value=8.3e-12 Score=123.41 Aligned_cols=134 Identities=18% Similarity=0.136 Sum_probs=99.0
Q ss_pred CCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEEE
Q 011333 83 IEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIAD 160 (488)
Q Consensus 83 ~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVAD 160 (488)
..|.||++++ +|+|||+|.. +.|+++++++ +.+..++... ++ ..++.|++|++|+ +|+|||+|
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~---g~~~~~~~~~-------~~----~~~~~p~~i~~d~~~G~l~v~d 144 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGSEG---GHATQLATSV-------DG----VPFKWLYAVTVDQRTGIVYFTD 144 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECTTC---EECEEEESEE-------TT----EECSCEEEEEECTTTCCEEEEE
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeCCC---CEEEEecccC-------CC----CcccccceEEEecCCCEEEEEC
Confidence 3799999997 8999999986 4699999875 4455554421 11 2478899999999 99999999
Q ss_pred CCC-----------------CEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCC
Q 011333 161 TMN-----------------MAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGN 220 (488)
Q Consensus 161 ~~N-----------------~rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gN 220 (488)
..+ ++|.+++ + +.+..+.. .+..|++|+ ++++| .|||+|+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----------------~~~~p~gia-~~~dg~~lyv~d~~~ 206 (322)
T 2fp8_A 145 VSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-----------------ELHVPGGAE-VSADSSFVLVAEFLS 206 (322)
T ss_dssp SCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-----------------EESCCCEEE-ECTTSSEEEEEEGGG
T ss_pred CcccccccccceehcccCCCceEEEEeCCCCEEEEecc-----------------CCccCcceE-ECCCCCEEEEEeCCC
Confidence 763 5788888 3 33544432 256899999 67776 599999999
Q ss_pred CeEEEEEcCCC----ceEEeccCCCcceEEEEec
Q 011333 221 RAIREIQLHFD----DCAYQYGSSFPLGIAVLLA 250 (488)
Q Consensus 221 ~rIrkI~~~g~----~~~~~~~~g~P~GIav~~g 250 (488)
++|+++++.+. ........+ |.||+++..
T Consensus 207 ~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 207 HQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNAD 239 (322)
T ss_dssp TEEEEEESSSTTTTCEEEEEECSS-EEEEEECTT
T ss_pred CeEEEEECCCCcCCccceEEeCCC-CCCeEECCC
Confidence 99999998852 112222234 999999864
No 31
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.36 E-value=1.6e-11 Score=116.00 Aligned_cols=134 Identities=19% Similarity=0.305 Sum_probs=100.9
Q ss_pred CCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 82 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
+..|.+|+++++|+|||+|..+++|++++..+. ... ... ...+..|.+|++|++|+|||+|.
T Consensus 107 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~---~~~-~~~--------------~~~~~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 107 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK---TQT-VLP--------------FTGLNDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC---SCE-ECC--------------CCSCCSCCCEEECTTCCEEEEEG
T ss_pred cCCCcceEECCCCCEEEEECCCCEEEEEECCCc---eeE-eec--------------cccCCCceeEEEeCCCCEEEEEC
Confidence 357999999999999999999999999975431 111 111 01267899999999999999999
Q ss_pred CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEec--c
Q 011333 162 MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQY--G 238 (488)
Q Consensus 162 ~N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~~--~ 238 (488)
.+++|.+++ ++........ ..+..|.+|+ ++.+|+|||++.++++|++++..+....... +
T Consensus 169 ~~~~i~~~~~~~~~~~~~~~---------------~~~~~p~~i~-~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~ 232 (270)
T 1rwi_B 169 DNNRVVKLEAESNNQVVLPF---------------TDITAPWGIA-VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG 232 (270)
T ss_dssp GGTEEEEECTTTCCEEECCC---------------SSCCSEEEEE-ECTTCCEEEEETTTSCEEEECTTCSCCEECCCCS
T ss_pred CCCEEEEEecCCCceEeecc---------------cCCCCceEEE-ECCCCCEEEEECCCCcEEEEcCCCCcceeeccCC
Confidence 999999999 4433222110 1246799999 7889999999999999999999876544422 2
Q ss_pred CCCcceEEEEe
Q 011333 239 SSFPLGIAVLL 249 (488)
Q Consensus 239 ~g~P~GIav~~ 249 (488)
...|.+|+++.
T Consensus 233 ~~~p~~i~~~~ 243 (270)
T 1rwi_B 233 LNTPLAVAVDS 243 (270)
T ss_dssp CSCEEEEEECT
T ss_pred CCCceeEEECC
Confidence 35688888874
No 32
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.34 E-value=2.7e-11 Score=132.86 Aligned_cols=137 Identities=19% Similarity=0.213 Sum_probs=108.0
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+.+|.+|++|+ +|.||++|..+++|++++++|. ...+++.. .+..|.|||+|. .++||++
T Consensus 348 l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~---~~~~v~~~---------------~~~~p~GlAvD~~~~~lY~t 409 (619)
T 3s94_A 348 IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS---GSQFVVTA---------------QIAHPDGIAVDWVARNLYWT 409 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECS---------------SCSCCCEEEEETTTTEEEEE
T ss_pred cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC---ccEEEEEC---------------CCCCcCceEEecccCcEEEE
Confidence 56899999997 7889999999999999999863 34444432 277899999996 7889999
Q ss_pred ECCCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-CeEEEEEcCCCceEE-
Q 011333 160 DTMNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-RAIREIQLHFDDCAY- 235 (488)
Q Consensus 160 D~~N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN-~rIrkI~~~g~~~~~- 235 (488)
|..+++|.+++ +|. ..++... .|+.|.+||+.+..|.||++|.++ .+|.++.++|.....
T Consensus 410 D~~~~~I~v~~~~G~~~~~l~~~----------------~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l 473 (619)
T 3s94_A 410 DTGTDRIEVTRLNGTMRKILISE----------------DLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVL 473 (619)
T ss_dssp ETTTTEEEEEETTSCSCEEEECT----------------TCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred eCCCCcEEEEeCCCCeEEEEEEC----------------CCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEE
Confidence 99999999999 665 3444421 378999999544579999999875 899999999865433
Q ss_pred -eccCCCcceEEEEecCC
Q 011333 236 -QYGSSFPLGIAVLLAAG 252 (488)
Q Consensus 236 -~~~~g~P~GIav~~g~g 252 (488)
......|.||+++...+
T Consensus 474 ~~~~l~~P~GlalD~~~~ 491 (619)
T 3s94_A 474 VNTSLGWPNGLALDYDEG 491 (619)
T ss_dssp ECSSCSCEEEEEEETTTT
T ss_pred EeCCCCCCeeeEEcccCC
Confidence 33567899999995433
No 33
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.34 E-value=3e-11 Score=132.79 Aligned_cols=135 Identities=15% Similarity=0.091 Sum_probs=107.3
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+.+|.+|++++ +|.||++|..+++|++++.+|. .+.+++.. .+..|.|||+|. .|+||++
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~---~~~~v~~~---------------g~~~P~GlAvD~~~~~LY~t 97 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGS---ALEHVVEF---------------GLDYPEGMAVDWLGKNLYWA 97 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECS---------------SCSCCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCC---CcEEEEeC---------------CCCCcceEEEEeCCCEEEEE
Confidence 45899999997 6889999999999999999873 34555443 166799999996 5789999
Q ss_pred ECCCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC-CCeEEEEEcCCCceE-E
Q 011333 160 DTMNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-NRAIREIQLHFDDCA-Y 235 (488)
Q Consensus 160 D~~N~rIrkid-~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-N~rIrkI~~~g~~~~-~ 235 (488)
|..+++|.+++ +|.. .++... .|..|.+||+.+..|.||++|++ +++|.+++++|.... .
T Consensus 98 D~~~~~I~v~~~dG~~~~~l~~~----------------~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l 161 (628)
T 4a0p_A 98 DTGTNRIEVSKLDGQHRQVLVWK----------------DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL 161 (628)
T ss_dssp ETTTTEEEEEETTSTTCEEEECS----------------SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred ECCCCEEEEEecCCCcEEEEEeC----------------CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEE
Confidence 99999999999 6653 444321 36789999954468999999987 899999999986543 3
Q ss_pred eccCCCcceEEEEec
Q 011333 236 QYGSSFPLGIAVLLA 250 (488)
Q Consensus 236 ~~~~g~P~GIav~~g 250 (488)
......|.||+++..
T Consensus 162 ~~~~~~P~GlalD~~ 176 (628)
T 4a0p_A 162 VPNVGRANGLTIDYA 176 (628)
T ss_dssp ECSCSSEEEEEEETT
T ss_pred ECCCCCcceEEEccc
Confidence 456678999999864
No 34
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.32 E-value=8e-11 Score=111.94 Aligned_cols=135 Identities=16% Similarity=0.233 Sum_probs=104.2
Q ss_pred CCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 82 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
...|.+|+++++|+|||++..++.|++++.++ .+..+... ..+..|.+|++|++|+|||++.
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g----~~~~~~~~--------------~~~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITNTG----KLEEYPLP--------------TNAAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECTTC----CEEEEECS--------------STTCCEEEEEECTTSSEEEEET
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECCCC----cEEEeeCC--------------CCCCCcceEEECCCCCEEEEcc
Confidence 45899999999999999999999999999863 33333211 1256799999999999999999
Q ss_pred CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEec--c
Q 011333 162 MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQY--G 238 (488)
Q Consensus 162 ~N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~~--~ 238 (488)
.+++|.+++ ++.+..+... ..+..|.+|+ ++++|+|||++.++++|.++++.+....+.. .
T Consensus 207 ~~~~i~~~~~~g~~~~~~~~---------------~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~ 270 (300)
T 2qc5_A 207 MGNKIGRITTTGEISEYDIP---------------TPNARPHAIT-AGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTE 270 (300)
T ss_dssp TTTEEEEECTTCCEEEEECS---------------STTCCEEEEE-ECSTTCEEEEETTTTEEEEECTTSCEEEEECCST
T ss_pred CCCEEEEEcCCCcEEEEECC---------------CCCCCceEEE-ECCCCCEEEeccCCCeEEEECCCCcEEEEECCcc
Confidence 999999999 5555544321 1245799999 7889999999999999999999765443322 3
Q ss_pred CCCcceEEEEec
Q 011333 239 SSFPLGIAVLLA 250 (488)
Q Consensus 239 ~g~P~GIav~~g 250 (488)
...|.+|+++..
T Consensus 271 ~~~~~~i~~~~~ 282 (300)
T 2qc5_A 271 NAEPHGITFGKD 282 (300)
T ss_dssp TCCCCCEEECTT
T ss_pred CCccceeEeCCC
Confidence 457899998743
No 35
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.30 E-value=1.6e-11 Score=136.46 Aligned_cols=135 Identities=16% Similarity=0.101 Sum_probs=101.3
Q ss_pred CCCceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVA 159 (488)
+..|.||+|+. +|+||++|..+++|.++++++. .+.+++.. .+..|+|||+|+ .|.||++
T Consensus 452 ~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~---~~~~l~~~---------------~~~~P~giavDp~~g~ly~t 513 (699)
T 1n7d_A 452 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------QGSKPRAIVVDPVHGFMYWT 513 (699)
T ss_dssp C--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC---CEEEECCC---------------SSCCCCCEECCSSSSCCEEC
T ss_pred CCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC---ceEEEEeC---------------CCCCcceEEEccCCCcEEEc
Confidence 45799999994 7889999999999999999862 33444321 267899999998 5789999
Q ss_pred ECCC-CEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe
Q 011333 160 DTMN-MAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ 236 (488)
Q Consensus 160 D~~N-~rIrkid-~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~ 236 (488)
|..+ ++|.+++ +|.. .+++. ..|..|++||+....++|||+|+.+++|++++++|......
T Consensus 514 d~~~~~~I~~~~~dG~~~~~l~~----------------~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~ 577 (699)
T 1n7d_A 514 DWGTPAKIKKGGLNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 577 (699)
T ss_dssp CCSSSCCEEBCCSSSCCCCEESC----------------SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEE
T ss_pred ccCCCCeEEEEeCCCCCeeEEEe----------------CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEE
Confidence 9876 8999998 5543 33321 13678999994335789999999999999999987544332
Q ss_pred ----ccCCCcceEEEEec
Q 011333 237 ----YGSSFPLGIAVLLA 250 (488)
Q Consensus 237 ----~~~g~P~GIav~~g 250 (488)
.....|.||+++..
T Consensus 578 ~~~~~~~~~P~glavd~~ 595 (699)
T 1n7d_A 578 LEDEKRLAHPFSLAVFED 595 (699)
T ss_dssp CCCSSSCSSCCCCEEETT
T ss_pred EecCCcCCCceEeEEECC
Confidence 23467999999743
No 36
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.25 E-value=3.7e-10 Score=107.30 Aligned_cols=135 Identities=11% Similarity=0.136 Sum_probs=103.6
Q ss_pred CCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 82 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
...|.+|+++++|+|||++..++.|.++++++ .+..+... ..+..|.+|++|++|+|||++.
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g----~~~~~~~~--------------~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTADG----TIYEYDLP--------------NKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTTS----CEEEEECS--------------STTCCEEEEEECTTSSEEEEET
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCCC----CEEEccCC--------------CCCCCceeEEECCCCCEEEEec
Confidence 35799999999999999999889999999874 33333211 1256799999999999999999
Q ss_pred CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe--cc
Q 011333 162 MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ--YG 238 (488)
Q Consensus 162 ~N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~--~~ 238 (488)
.+++|.+++ ++.+..+... ..+..|.+|+ ++++|+|||++..+++|.+++..+...... ..
T Consensus 165 ~~~~i~~~~~~g~~~~~~~~---------------~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~ 228 (300)
T 2qc5_A 165 QNNSIGRITNTGKLEEYPLP---------------TNAAAPVGIT-SGNDGALWFVEIMGNKIGRITTTGEISEYDIPTP 228 (300)
T ss_dssp TTTEEEEECTTCCEEEEECS---------------STTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCEEEEECSST
T ss_pred CCCeEEEECCCCcEEEeeCC---------------CCCCCcceEE-ECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCC
Confidence 999999999 5555544321 1245789999 788999999999999999999966544332 23
Q ss_pred CCCcceEEEEec
Q 011333 239 SSFPLGIAVLLA 250 (488)
Q Consensus 239 ~g~P~GIav~~g 250 (488)
...|.+|+++..
T Consensus 229 ~~~~~~i~~d~~ 240 (300)
T 2qc5_A 229 NARPHAITAGKN 240 (300)
T ss_dssp TCCEEEEEECST
T ss_pred CCCceEEEECCC
Confidence 456888888744
No 37
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.22 E-value=5.9e-11 Score=117.24 Aligned_cols=151 Identities=11% Similarity=0.109 Sum_probs=105.3
Q ss_pred CCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccc--cCCC---cccccccCCcceEEEcC-CCc
Q 011333 82 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSG--HVDG---KPREARMNHPKGLTVDD-RGN 155 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G--~~dG---~a~~a~Ln~P~GIAvD~-dG~ 155 (488)
+..|.+++++++|++|++|..+++|+++++++ +.+..+.... ...+ ..+| ......+..|.||++|+ +|+
T Consensus 18 ~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~---~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 18 SYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPN---SGFVDFAYAS-PYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp SSCCCCEECCTTCSSEEEECTTSEEEEECCTT---TCEEEEEESC-TTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred cCCceEEEEcCCCCEEEEEcCCCeEEEECCCC---CceEEEeccc-ccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 45899999999999666788889999999886 3455554321 0000 0011 11223467899999997 899
Q ss_pred EEEEECCCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEEEECCC------------
Q 011333 156 IYIADTMNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLVIDRGN------------ 220 (488)
Q Consensus 156 LYVAD~~N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~-~G~LYVaD~gN------------ 220 (488)
|||+|.. +.|++++ +++ +++++.... ...+..|++|+ +++ +|+|||+|..+
T Consensus 94 l~v~d~~-~~i~~~d~~~g~~~~~~~~~~------------~~~~~~p~~i~-~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 94 LYIVDCY-YHLSVVGSEGGHATQLATSVD------------GVPFKWLYAVT-VDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp EEEEETT-TEEEEECTTCEECEEEESEET------------TEECSCEEEEE-ECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred EEEEECC-CCEEEEeCCCCEEEEecccCC------------CCcccccceEE-EecCCCEEEEECCcccccccccceehc
Confidence 9999985 5699999 434 666654211 12467899999 788 99999999763
Q ss_pred -----CeEEEEEcCCCce-EEeccCCCcceEEEEec
Q 011333 221 -----RAIREIQLHFDDC-AYQYGSSFPLGIAVLLA 250 (488)
Q Consensus 221 -----~rIrkI~~~g~~~-~~~~~~g~P~GIav~~g 250 (488)
++|.+++..+... ........|.||+++..
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d 195 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSAD 195 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTT
T ss_pred ccCCCceEEEEeCCCCEEEEeccCCccCcceEECCC
Confidence 6899999875433 23445578999999854
No 38
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.22 E-value=5.2e-10 Score=108.12 Aligned_cols=136 Identities=15% Similarity=0.086 Sum_probs=104.8
Q ss_pred CCCceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEE
Q 011333 82 GIEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 160 (488)
Q Consensus 82 l~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD 160 (488)
+..|.|++++++|+ ||+++..+++|+++++++ + ...+... ...|.+|+++++|+|||++
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~---~-~~~~~~~----------------~~~~~~l~~~~dg~l~v~~ 86 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG---Q-LSPEMHP----------------SHHQNGHCLNKQGHLIACS 86 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS---C-EEEEESS----------------CSSEEEEEECTTCCEEEEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCC---C-eEEEECC----------------CCCcceeeECCCCcEEEEe
Confidence 44799999999998 999999999999999986 3 4444321 2458999999999999999
Q ss_pred CCCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC-----------------CCC
Q 011333 161 TMNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR-----------------GNR 221 (488)
Q Consensus 161 ~~N~rIrkid--~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~-----------------gN~ 221 (488)
..+++|.+++ ++.+..+..... ...+..|++|+ ++++|+|||+|. ..+
T Consensus 87 ~~~~~i~~~d~~~g~~~~~~~~~~------------~~~~~~~~~i~-~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 87 HGLRRLERQREPGGEWESIADSFE------------GKKLNSPNDVC-LAPDGSLWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp TTTTEEEEECSTTCCEEEEECEET------------TEECCCCCCEE-ECTTSCEEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred cCCCeEEEEcCCCCcEEEEeeccC------------CCCCCCCCCEE-ECCCCCEEEECCccccccccccccccccCCCc
Confidence 9889999999 455665543211 12366899999 799999999985 246
Q ss_pred eEEEEEcCCCceEEeccCCCcceEEEEec
Q 011333 222 AIREIQLHFDDCAYQYGSSFPLGIAVLLA 250 (488)
Q Consensus 222 rIrkI~~~g~~~~~~~~~g~P~GIav~~g 250 (488)
.|++++..+...........|.|+++...
T Consensus 154 ~l~~~~~~g~~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 154 WVFRLAPDGTLSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp EEEEECTTSCEEEEECCCSSEEEEEECTT
T ss_pred EEEEECCCCCEEEeecCCCCCccEEECCC
Confidence 89999988655455556677899988754
No 39
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.18 E-value=4.6e-10 Score=110.55 Aligned_cols=113 Identities=14% Similarity=0.073 Sum_probs=87.8
Q ss_pred CCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 83 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
..|.+++++++|+|||+|..+++|+++++++ ....++.. -..|.||+++++|+|||||..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g----~~~~~~~~----------------~~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG----NQQIHATV----------------EGKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC----CEEEEEEC----------------SSEEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC----ceEEEEeC----------------CCCceeEEEcCCCcEEEEecc
Confidence 4799999999999999999999999999985 33333332 124999999999999999976
Q ss_pred CC--EEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 163 NM--AIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 163 N~--rIrkid--~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
++ +|.+++ ++.+..++.... ...|.+++ +..++.+||+|..+++|++++..+.
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~~~~~---------------~~~~~g~~-~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLLTLPD---------------AIFLNGIT-PLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEECTT---------------CSCEEEEE-ESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCcceEEEEcCCCCeEEEEEeCCC---------------ccccCccc-ccCCCcEEEEECCCCeEEEEeCCCC
Confidence 54 588887 455766654211 23567888 5778899999999999999998753
No 40
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.18 E-value=9.8e-10 Score=106.20 Aligned_cols=136 Identities=15% Similarity=0.158 Sum_probs=100.8
Q ss_pred CCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 83 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
..|.+|+++++|.|||++..+++|.++++.. +.+..+.... ....++.|++|++|++|+|||+|..
T Consensus 69 ~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~---g~~~~~~~~~-----------~~~~~~~~~~i~~d~~G~l~vtd~~ 134 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIACSHGLRRLERQREPG---GEWESIADSF-----------EGKKLNSPNDVCLAPDGSLWFSDPT 134 (296)
T ss_dssp SSEEEEEECTTCCEEEEETTTTEEEEECSTT---CCEEEEECEE-----------TTEECCCCCCEEECTTSCEEEEECS
T ss_pred CCcceeeECCCCcEEEEecCCCeEEEEcCCC---CcEEEEeecc-----------CCCCCCCCCCEEECCCCCEEEECCc
Confidence 4799999999999999999889999999854 3455554321 0123678999999999999999862
Q ss_pred -----------------CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEE
Q 011333 163 -----------------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIR 224 (488)
Q Consensus 163 -----------------N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIr 224 (488)
...|.+++ ++.+..+... +..|++|+ ++++|+++|+|+.+++|+
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~-----------------~~~~~gi~-~s~dg~~lv~~~~~~~i~ 196 (296)
T 3e5z_A 135 YGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRD-----------------RVKPNGLA-FLPSGNLLVSDTGDNATH 196 (296)
T ss_dssp HHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECC-----------------CSSEEEEE-ECTTSCEEEEETTTTEEE
T ss_pred cccccccccccccccCCCcEEEEECCCCCEEEeecC-----------------CCCCccEE-ECCCCCEEEEeCCCCeEE
Confidence 45899998 4556555432 45789999 678887779999999999
Q ss_pred EEEcC--CCc---e-EEeccCCCcceEEEEec
Q 011333 225 EIQLH--FDD---C-AYQYGSSFPLGIAVLLA 250 (488)
Q Consensus 225 kI~~~--g~~---~-~~~~~~g~P~GIav~~g 250 (488)
++++. +.. . ......+.|.+|+++..
T Consensus 197 ~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 197 RYCLNARGETEYQGVHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp EEEECSSSCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred EEEECCCCcCcCCCeEeeCCCCCCCeEEECCC
Confidence 99986 222 1 11123457899999854
No 41
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.17 E-value=1.4e-09 Score=103.23 Aligned_cols=135 Identities=15% Similarity=0.211 Sum_probs=102.1
Q ss_pred CCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 82 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
...|.+|+++++|.|||++..++.|+++++++ .+..+... .....|.+|++|++|+|||++.
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g----~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMNGNRIGRITDDG----KIREYELP--------------NKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTC----CEEEEECS--------------STTCCEEEEEECTTSCEEEEET
T ss_pred CCCceeeEECCCCCEEEEecCCceEEEECCCC----CEEEecCC--------------CCCCCCceEEEcCCCCEEEEeC
Confidence 45899999999999999999889999999853 33433221 1145799999999999999999
Q ss_pred CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEec--c
Q 011333 162 MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQY--G 238 (488)
Q Consensus 162 ~N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~~--~ 238 (488)
.++.|.+++ ++.+..+... ..+..|.+|+ ++++|+|||++..++.|.++++.+....+.. .
T Consensus 160 ~~~~i~~~~~~g~~~~~~~~---------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~ 223 (299)
T 2z2n_A 160 QNNAIGRITESGDITEFKIP---------------TPASGPVGIT-KGNDDALWFVEIIGNKIGRITTSGEITEFKIPTP 223 (299)
T ss_dssp TTTEEEEECTTCCEEEEECS---------------STTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCEEEEECSST
T ss_pred CCCEEEEEcCCCcEEEeeCC---------------CCCCcceeEE-ECCCCCEEEEccCCceEEEECCCCcEEEEECCCC
Confidence 899999999 5555544221 1245789999 7889999999999999999999554333321 2
Q ss_pred CCCcceEEEEec
Q 011333 239 SSFPLGIAVLLA 250 (488)
Q Consensus 239 ~g~P~GIav~~g 250 (488)
...|.+|+++..
T Consensus 224 ~~~~~~i~~~~~ 235 (299)
T 2z2n_A 224 NARPHAITAGAG 235 (299)
T ss_dssp TCCEEEEEECST
T ss_pred CCCceeEEECCC
Confidence 356888888743
No 42
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.16 E-value=1.9e-09 Score=102.25 Aligned_cols=132 Identities=17% Similarity=0.224 Sum_probs=99.7
Q ss_pred CCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 82 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
...|.+|+++++|+||+++..++.|++++.+ +.+..+... ..+..|.+|++|++|+|||++.
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITES----GDITEFKIP--------------TPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT----CCEEEEECS--------------STTCCEEEEEECTTSSEEEEET
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcCC----CcEEEeeCC--------------CCCCcceeEEECCCCCEEEEcc
Confidence 4579999999999999999988999999985 344443221 1256799999999999999999
Q ss_pred CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe--cc
Q 011333 162 MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ--YG 238 (488)
Q Consensus 162 ~N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~--~~ 238 (488)
.++.|.+++ ++.+..+... ..+..|.+|+ ++++|+|||++..++.|.++++.+....+. ..
T Consensus 202 ~~~~i~~~~~~g~~~~~~~~---------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~ 265 (299)
T 2z2n_A 202 IGNKIGRITTSGEITEFKIP---------------TPNARPHAIT-AGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIK 265 (299)
T ss_dssp TTTEEEEECTTCCEEEEECS---------------STTCCEEEEE-ECSTTCEEEEETTTTEEEEEETTTEEEEEECSSS
T ss_pred CCceEEEECCCCcEEEEECC---------------CCCCCceeEE-ECCCCCEEEeccCCceEEEECCCCceEEEeCCCC
Confidence 899999999 4555544221 1245789998 788999999999999999999865333322 22
Q ss_pred CCCcceEEE
Q 011333 239 SSFPLGIAV 247 (488)
Q Consensus 239 ~g~P~GIav 247 (488)
...|.++++
T Consensus 266 ~~~~~~i~~ 274 (299)
T 2z2n_A 266 SAEPHGICF 274 (299)
T ss_dssp SCCEEEEEE
T ss_pred CCccceEEe
Confidence 345777776
No 43
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.12 E-value=1.7e-10 Score=128.19 Aligned_cols=114 Identities=20% Similarity=0.250 Sum_probs=88.7
Q ss_pred CCCceEEEEcc-CCcEEEEECCC-CeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC-CcEEE
Q 011333 82 GIEPYSVEVLP-GGELLILDSAN-SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYI 158 (488)
Q Consensus 82 l~~P~GIaVd~-dG~LYVaD~~n-~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d-G~LYV 158 (488)
+..|.+|++++ .|.||++|.++ ++|.+++++|.. ..+++. ..|..|+|||+|++ +.|||
T Consensus 495 ~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~---~~~l~~---------------~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 495 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVT---------------ENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC---CCEESC---------------SSCSSCCCEEECTTTCCEEE
T ss_pred CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC---eeEEEe---------------CCCCCccEEEEeccCCEEEE
Confidence 56899999998 67899999876 899999988632 222221 12788999999975 68999
Q ss_pred EECCCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 159 ADTMNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 159 AD~~N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
+|+.+++|.+++ ++. ..+++.. ...+..|.+|+ ++. +.||++|+++++|+++++.
T Consensus 557 aD~~~~~I~~~d~dG~~~~~~~~~--------------~~~~~~P~gla-vd~-~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 557 VDSKLHSISSIDVNGGNRKTILED--------------EKRLAHPFSLA-VFE-DKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp EETTTTEEEEECSSSSCCEEECCC--------------SSSCSSCCCCE-EET-TEEEEECSTTTCEEEEETT
T ss_pred EecCCCeEEEEccCCCceEEEEec--------------CCcCCCceEeE-EEC-CEEEEEeCCCCeEEEEEcc
Confidence 999999999999 554 4555432 12367899999 554 5999999999999999974
No 44
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.11 E-value=1.4e-09 Score=110.54 Aligned_cols=134 Identities=10% Similarity=0.081 Sum_probs=84.0
Q ss_pred CCCceEEEEccC----CcEEEEECCC-----CeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC
Q 011333 82 GIEPYSVEVLPG----GELLILDSAN-----SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD 152 (488)
Q Consensus 82 l~~P~GIaVd~d----G~LYVaD~~n-----~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~ 152 (488)
...|.||+++++ |.|||++..+ ++|.+++.++.......+++..... .....+.|.+|++++
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~---------~~~~~h~~~~l~~~p 144 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPA---------RPHGLHSGGRIAFGP 144 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECC---------CTTCCCCCCCEEECT
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCC---------CCCCCcCCceEEECC
Confidence 457999999997 8899999754 7999999875322222333221100 011256789999999
Q ss_pred CCcEEEEECC-------------CCEEEEEc-CCCcEEEeCCccCCCCCC--CCCCcccccCCCCCeeEEECC-CCeEEE
Q 011333 153 RGNIYIADTM-------------NMAIRKIS-DSGVTTIAGGKWGRGGGH--VDGPSEDAKFSNDFDVVYIGS-SCSLLV 215 (488)
Q Consensus 153 dG~LYVAD~~-------------N~rIrkid-~ggVttIaGg~~g~~~g~--~dG~~~~a~f~~P~gIa~vd~-~G~LYV 215 (488)
+|.|||++.. ..+|.+|+ ++.+. .+.+ + .+. ........-+.+|++|+ +++ +|.|||
T Consensus 145 dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p--~~np--f-~~~~~~~~~i~a~G~rnp~g~a-~d~~~g~l~v 218 (352)
T 2ism_A 145 DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA--PGNP--F-LGRRGARPEVYSLGHRNPQGLA-WHPKTGELFS 218 (352)
T ss_dssp TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC--TTCT--T-TTCTTSCTTEEEECCSEECCCE-ECTTTCCEEE
T ss_pred CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC--CCCc--c-cCCCCCCccEEEEcCCCcccEE-EECCCCCEEE
Confidence 9999999742 35899998 44321 1110 0 000 00011122367899999 576 899999
Q ss_pred EECCCCe--------EEEEEcCC
Q 011333 216 IDRGNRA--------IREIQLHF 230 (488)
Q Consensus 216 aD~gN~r--------IrkI~~~g 230 (488)
+|.+++. |..|...+
T Consensus 219 ~d~g~~~~~~~~~dei~~i~~G~ 241 (352)
T 2ism_A 219 SEHGPSGEQGYGHDEVNLIVPGG 241 (352)
T ss_dssp EEECC------CCCEEEEECTTC
T ss_pred EEcCCCCCCCCCCeEEEEeccCC
Confidence 9998877 77776543
No 45
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.11 E-value=1.8e-09 Score=110.24 Aligned_cols=150 Identities=21% Similarity=0.240 Sum_probs=104.3
Q ss_pred CCceeEEeecCCCCCCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcce
Q 011333 68 SGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKG 147 (488)
Q Consensus 68 dG~~~~~~~~G~~~l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~G 147 (488)
.++..+....+ +..|.+|+++++|+|||++.. ++|++++.++ . ..+++.... ...+..|.|
T Consensus 17 ~~~~~~~va~~---l~~P~~ia~~pdG~l~V~e~~-g~I~~~d~~G----~-~~~~~~~v~----------~~g~~g~~g 77 (354)
T 3a9g_A 17 WKFKISEVASD---LEVPWSIAPLGGGRYLVTERP-GRLVLISPSG----K-KLVASFDVA----------NVGEAGLLG 77 (354)
T ss_dssp CCEEEEEEECS---CSCEEEEEEEETTEEEEEETT-TEEEEECSSC----E-EEEEECCCC----------CSTTCSEEE
T ss_pred CCeEEEEEeCC---CCCCeEEEEcCCCeEEEEeCC-CEEEEEeCCC----c-eEeecccee----------ecCCCceee
Confidence 34555555543 668999999999999999987 8999998663 4 444432100 011567999
Q ss_pred EEEcCC----CcEEEEECC---C----CEEEEEc-CCC------cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC
Q 011333 148 LTVDDR----GNIYIADTM---N----MAIRKIS-DSG------VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS 209 (488)
Q Consensus 148 IAvD~d----G~LYVAD~~---N----~rIrkid-~gg------VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~ 209 (488)
|+++++ |.|||++.. + ++|.+++ ++. ..++..+-. ......|.+|+ +++
T Consensus 78 ia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~------------~~~~h~~~~l~-~~p 144 (354)
T 3a9g_A 78 LALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP------------GAYIHNGGRIR-FGP 144 (354)
T ss_dssp EEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE------------CCSSCCCCCEE-ECT
T ss_pred EEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC------------CCCCcCCceEE-ECC
Confidence 999996 899999974 3 7899998 433 222321100 11245688999 789
Q ss_pred CCeEEEEECC-------------CCeEEEEEcCCC---------ceEEeccCCCcceEEEEe
Q 011333 210 SCSLLVIDRG-------------NRAIREIQLHFD---------DCAYQYGSSFPLGIAVLL 249 (488)
Q Consensus 210 ~G~LYVaD~g-------------N~rIrkI~~~g~---------~~~~~~~~g~P~GIav~~ 249 (488)
+|.|||++.. +++|.+|+++|. ...+..+...|.||+++.
T Consensus 145 DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~ 206 (354)
T 3a9g_A 145 DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHR 206 (354)
T ss_dssp TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECT
T ss_pred CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeC
Confidence 9999999632 368999999874 234456667799999986
No 46
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.11 E-value=2.2e-09 Score=105.09 Aligned_cols=134 Identities=10% Similarity=0.098 Sum_probs=102.0
Q ss_pred CCceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 83 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
..+.|++.+++|+ ||++|..+++|+++++++ .+..+... -..|+++++|++|+||+++.
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----~~~~~~~~----------------~~~~~gl~~d~dG~l~v~~~ 104 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG----TVDVLLDA----------------TAFTNGNAVDAQQRLVHCEH 104 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETTS----CEEEEEES----------------CSCEEEEEECTTSCEEEEET
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCCC----CEEEEeCC----------------CCccceeeECCCCCEEEEEC
Confidence 3678999999988 999999999999999864 34444322 23589999999999999999
Q ss_pred CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC-----------------CCCeE
Q 011333 162 MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR-----------------GNRAI 223 (488)
Q Consensus 162 ~N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~-----------------gN~rI 223 (488)
.+++|.+++ ++.+++++.... ...++.|++|+ ++++|+|||+|. ..+.|
T Consensus 105 ~~~~v~~~~~~g~~~~~~~~~~------------~~~~~~~~~i~-~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v 171 (305)
T 3dr2_A 105 GRRAITRSDADGQAHLLVGRYA------------GKRLNSPNDLI-VARDGAIWFTDPPFGLRKPSQGCPADPELAHHSV 171 (305)
T ss_dssp TTTEEEEECTTSCEEEEECEET------------TEECSCCCCEE-ECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEE
T ss_pred CCCEEEEECCCCCEEEEEeccC------------CCccCCCCCEE-ECCCCCEEEeCcCCCccccccccccccccCCCeE
Confidence 889999999 666776654321 12467899999 799999999984 23689
Q ss_pred EEEEcC-CCceEEeccCCCcceEEEEec
Q 011333 224 REIQLH-FDDCAYQYGSSFPLGIAVLLA 250 (488)
Q Consensus 224 rkI~~~-g~~~~~~~~~g~P~GIav~~g 250 (488)
+++++. +...... ....|.|+++...
T Consensus 172 ~~~d~~~g~~~~~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 172 YRLPPDGSPLQRMA-DLDHPNGLAFSPD 198 (305)
T ss_dssp EEECSSSCCCEEEE-EESSEEEEEECTT
T ss_pred EEEcCCCCcEEEEe-cCCCCcceEEcCC
Confidence 999985 4433333 5567888888644
No 47
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.10 E-value=1.9e-09 Score=105.56 Aligned_cols=134 Identities=16% Similarity=0.195 Sum_probs=99.6
Q ss_pred CCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 83 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
..|.+++++++|+||+++..+++|.+++.++ .+..++... . ...++.|++|++|++|+|||+|..
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g----~~~~~~~~~-------~----~~~~~~~~~i~~d~dG~l~~td~~ 150 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDADG----QAHLLVGRY-------A----GKRLNSPNDLIVARDGAIWFTDPP 150 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTS----CEEEEECEE-------T----TEECSCCCCEEECTTSCEEEECCS
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCCC----CEEEEEecc-------C----CCccCCCCCEEECCCCCEEEeCcC
Confidence 3799999999999999999989999999874 455555421 1 134788999999999999999841
Q ss_pred -----------------CCEEEEEcC--CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCC--
Q 011333 163 -----------------NMAIRKISD--SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGN-- 220 (488)
Q Consensus 163 -----------------N~rIrkid~--ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gN-- 220 (488)
...|.+++. +.+..+. . +..|++++ +++++ .|||+|+.+
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-----------------~~~p~gl~-~spdg~~lyv~~~~~~~ 211 (305)
T 3dr2_A 151 FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-----------------LDHPNGLA-FSPDEQTLYVSQTPEQG 211 (305)
T ss_dssp GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-----------------ESSEEEEE-ECTTSSEEEEEECCC--
T ss_pred CCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-----------------CCCCcceE-EcCCCCEEEEEecCCcC
Confidence 357889983 4465554 2 34789999 56666 599999974
Q ss_pred ---CeEEEEEcCCCceE-----EeccCCCcceEEEEec
Q 011333 221 ---RAIREIQLHFDDCA-----YQYGSSFPLGIAVLLA 250 (488)
Q Consensus 221 ---~rIrkI~~~g~~~~-----~~~~~g~P~GIav~~g 250 (488)
++|++++..+.... .....+.|.||+++..
T Consensus 212 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~ 249 (305)
T 3dr2_A 212 HGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRG 249 (305)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTT
T ss_pred CCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCC
Confidence 89999998754311 1123467999999855
No 48
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.08 E-value=2e-09 Score=109.50 Aligned_cols=141 Identities=16% Similarity=0.165 Sum_probs=98.7
Q ss_pred CCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC----CcEE
Q 011333 82 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR----GNIY 157 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d----G~LY 157 (488)
+..|.+|+++++|+|||+|.. ++|++++ ++ ....+++.... ...+..|.||+++++ |.||
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~-g~I~~i~-~g----~~~~~~~~~v~----------~~g~~~p~gia~~pdf~~~g~lY 93 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERP-GRIRLFR-EG----RLSTYAELSVY----------HRGESGLLGLALHPRFPQEPYVY 93 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETT-TEEEEEE-TT----EEEEEEECCCC----------CSTTCSEEEEEECTTTTTSCEEE
T ss_pred CCCceEEEEcCCCeEEEEeCC-CeEEEEE-CC----CccEeecceEe----------ecCCCCceeEEECCCCCCCCEEE
Confidence 558999999999999999986 8999999 53 44455432100 012567999999997 7999
Q ss_pred EEECCC-----CEEEEEc-CCC-c---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC--------
Q 011333 158 IADTMN-----MAIRKIS-DSG-V---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-------- 219 (488)
Q Consensus 158 VAD~~N-----~rIrkid-~gg-V---ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-------- 219 (488)
|+++.+ ++|.+++ ++. + .++..+-.. .......|.+|+ ++++|.|||++..
T Consensus 94 v~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~----------~~~~~h~~~~l~-~~pdG~Lyv~~G~~~~~~~~~ 162 (352)
T 2ism_A 94 AYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPA----------RPHGLHSGGRIA-FGPDGMLYVTTGEVYERELAQ 162 (352)
T ss_dssp EEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECC----------CTTCCCCCCCEE-ECTTSCEEEECCCTTCGGGGG
T ss_pred EEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCC----------CCCCCcCCceEE-ECCCCCEEEEECCCCCCcccc
Confidence 999865 8899998 432 2 223221000 011356788999 7899999999732
Q ss_pred -----CCeEEEEEcCCC--------------ceEEeccCCCcceEEEEe
Q 011333 220 -----NRAIREIQLHFD--------------DCAYQYGSSFPLGIAVLL 249 (488)
Q Consensus 220 -----N~rIrkI~~~g~--------------~~~~~~~~g~P~GIav~~ 249 (488)
.++|.+|+++|. ...+..+...|.||+++.
T Consensus 163 d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~ 211 (352)
T 2ism_A 163 DLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHP 211 (352)
T ss_dssp CTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECT
T ss_pred CCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEEC
Confidence 368999999872 223445556699999986
No 49
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.05 E-value=4.3e-09 Score=103.60 Aligned_cols=140 Identities=11% Similarity=-0.012 Sum_probs=97.4
Q ss_pred CceEEEEccCCcEEEEECCCC--eEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 84 EPYSVEVLPGGELLILDSANS--NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~--rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
.|++|+++++|+|||+|..++ +|++++... +.+..++... ....|.|+++++++++||+|.
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~---g~~~~~~~~~--------------~~~~~~g~~~~~~~~~~v~d~ 135 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSD---GTVETLLTLP--------------DAIFLNGITPLSDTQYLTADS 135 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTT---SCEEEEEECT--------------TCSCEEEEEESSSSEEEEEET
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCC---CeEEEEEeCC--------------CccccCcccccCCCcEEEEEC
Confidence 799999999999999997654 599988654 4555555431 134578999988889999999
Q ss_pred CCCEEEEEcC-CC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc----e
Q 011333 162 MNMAIRKISD-SG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD----C 233 (488)
Q Consensus 162 ~N~rIrkid~-gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~----~ 233 (488)
.+++|.+++. ++ +....+. .. .. .....|..|++|. .+.+.|||+|+.+++|++|+.+++. .
T Consensus 136 ~~g~i~~~d~~~~~~~v~~~~~~--~~-~~-----~~~~~~~~pngis--~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~ 205 (306)
T 2p4o_A 136 YRGAIWLIDVVQPSGSIWLEHPM--LA-RS-----NSESVFPAANGLK--RFGNFLYVSNTEKMLLLRIPVDSTDKPGEP 205 (306)
T ss_dssp TTTEEEEEETTTTEEEEEEECGG--GS-CS-----STTCCSCSEEEEE--EETTEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred CCCeEEEEeCCCCcEeEEEECCc--cc-cc-----cccCCCCcCCCcC--cCCCEEEEEeCCCCEEEEEEeCCCCCCCcc
Confidence 8999999994 32 2222221 00 00 0113467899984 3456899999999999999987521 1
Q ss_pred EEeccCCCcceEEEEec
Q 011333 234 AYQYGSSFPLGIAVLLA 250 (488)
Q Consensus 234 ~~~~~~g~P~GIav~~g 250 (488)
........|.||+++..
T Consensus 206 ~~~~~~~~P~gi~vd~d 222 (306)
T 2p4o_A 206 EIFVEQTNIDDFAFDVE 222 (306)
T ss_dssp EEEEESCCCSSEEEBTT
T ss_pred EEEeccCCCCCeEECCC
Confidence 12222367999999954
No 50
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.05 E-value=2.2e-09 Score=104.95 Aligned_cols=132 Identities=11% Similarity=0.033 Sum_probs=94.5
Q ss_pred CCCceEEEEccCCcEEEEEC-----------CCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEE
Q 011333 82 GIEPYSVEVLPGGELLILDS-----------ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV 150 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVaD~-----------~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAv 150 (488)
...|.+++++++|+||+++. ..++|+++++++ .+..+... +..|+||++
T Consensus 97 ~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g----~~~~~~~~----------------~~~pngi~~ 156 (297)
T 3g4e_A 97 NNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH----HVKKYFDQ----------------VDISNGLDW 156 (297)
T ss_dssp SEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS----CEEEEEEE----------------ESBEEEEEE
T ss_pred CCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC----CEEEEeec----------------cccccceEE
Confidence 45689999999999999973 346899999874 33444322 567999999
Q ss_pred cCCCc-EEEEECCCCEEEEEc-C---CCcE---EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCe
Q 011333 151 DDRGN-IYIADTMNMAIRKIS-D---SGVT---TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRA 222 (488)
Q Consensus 151 D~dG~-LYVAD~~N~rIrkid-~---ggVt---tIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~r 222 (488)
+++|+ |||+|+.+++|.+++ + +.+. .++.... ....|.+|+ +|.+|+|||++.++++
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~--------------~~~~p~g~~-~d~~G~lwva~~~~~~ 221 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK--------------EEQIPDGMC-IDAEGKLWVACYNGGR 221 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG--------------GGCEEEEEE-EBTTSCEEEEEETTTE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC--------------CCCCCCeeE-ECCCCCEEEEEcCCCE
Confidence 99996 999999999999997 2 3232 2221100 113689999 7999999999999999
Q ss_pred EEEEEcC-CCceEEec-cCCCcceEEEE
Q 011333 223 IREIQLH-FDDCAYQY-GSSFPLGIAVL 248 (488)
Q Consensus 223 IrkI~~~-g~~~~~~~-~~g~P~GIav~ 248 (488)
|.++++. |....... ....|..+++.
T Consensus 222 v~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp EEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred EEEEcCCCceEEEEEECCCCCceEEEEe
Confidence 9999997 54333322 22356666665
No 51
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.02 E-value=3.1e-09 Score=103.80 Aligned_cols=133 Identities=11% Similarity=0.070 Sum_probs=95.5
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC-
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM- 162 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~- 162 (488)
.|.+++++++|+|||+. .+.|++++.++ +.+..++....+ ..++.|++|++|++|+|||++..
T Consensus 55 ~~~~i~~~~dG~l~v~~--~~~l~~~d~~~---g~~~~~~~~~~~-----------~~~~~~~di~~d~dG~l~~~~~~~ 118 (297)
T 3g4e_A 55 PVSSVALRQSGGYVATI--GTKFCALNWKE---QSAVVLATVDND-----------KKNNRFNDGKVDPAGRYFAGTMAE 118 (297)
T ss_dssp CEEEEEEBTTSSEEEEE--TTEEEEEETTT---TEEEEEEECCTT-----------CSSEEEEEEEECTTSCEEEEEEEC
T ss_pred ceEEEEECCCCCEEEEE--CCeEEEEECCC---CcEEEEEecCCC-----------CCCCCCCCEEECCCCCEEEecCCc
Confidence 68999999999999997 46999999876 455555442101 12567999999999999999843
Q ss_pred ----------CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcC-
Q 011333 163 ----------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLH- 229 (488)
Q Consensus 163 ----------N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gN~rIrkI~~~- 229 (488)
..+|.+++ ++.+..+.. .+..|++|+ +++++ .|||+|+.+++|++++.+
T Consensus 119 ~~~~~~~~~~~~~l~~~d~~g~~~~~~~-----------------~~~~pngi~-~spdg~~lyv~~~~~~~i~~~~~d~ 180 (297)
T 3g4e_A 119 ETAPAVLERHQGALYSLFPDHHVKKYFD-----------------QVDISNGLD-WSLDHKIFYYIDSLSYSVDAFDYDL 180 (297)
T ss_dssp CSBTTBCCTTCEEEEEECTTSCEEEEEE-----------------EESBEEEEE-ECTTSCEEEEEEGGGTEEEEEEECT
T ss_pred ccccccccCCCcEEEEEECCCCEEEEee-----------------ccccccceE-EcCCCCEEEEecCCCCcEEEEeccC
Confidence 35788888 455555432 245789999 45555 699999999999999874
Q ss_pred --CCce--E-E---eccCCCcceEEEEec
Q 011333 230 --FDDC--A-Y---QYGSSFPLGIAVLLA 250 (488)
Q Consensus 230 --g~~~--~-~---~~~~g~P~GIav~~g 250 (488)
|... . . ....+.|.||+++..
T Consensus 181 ~~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 181 QTGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp TTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred CCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 2111 1 1 112367999999854
No 52
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.00 E-value=5.2e-09 Score=100.71 Aligned_cols=139 Identities=15% Similarity=0.169 Sum_probs=99.1
Q ss_pred CCCceEEEEccCCcEEEE-------ECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC-
Q 011333 82 GIEPYSVEVLPGGELLIL-------DSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR- 153 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVa-------D~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d- 153 (488)
+..|.+++++++|.||++ +..+++|+++++.+ +.+..+... ...| ....|.+|++|++
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~--~~~~---------~~~~~~~i~~~~~~ 82 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT---GKKTVICKP--EVNG---------YGGIPAGCQCDRDA 82 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT---CCEEEEECC--EETT---------EECCEEEEEECSSS
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC---CcEEEEEec--ccCC---------CCCCCceEEEecCC
Confidence 447999999999999999 87788999999764 344444321 0001 1356999999999
Q ss_pred CcEEEEECCCCEEEEEc-CCCcEEE-eCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-----------
Q 011333 154 GNIYIADTMNMAIRKIS-DSGVTTI-AGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN----------- 220 (488)
Q Consensus 154 G~LYVAD~~N~rIrkid-~ggVttI-aGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN----------- 220 (488)
|+|||++..+ .|.+++ ++.+..+ ..... ...+..|++|+ ++++|+|||++..+
T Consensus 83 g~l~v~~~~~-~l~~~d~~g~~~~~~~~~~~------------~~~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 83 NQLFVADMRL-GLLVVQTDGTFEEIAKKDSE------------GRRMQGCNDCA-FDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp SEEEEEETTT-EEEEEETTSCEEECCSBCTT------------SCBCBCCCEEE-ECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CcEEEEECCC-CEEEEeCCCCEEEEEeccCC------------CccccCCcCEE-ECCCCCEEEEecCcccccccccccc
Confidence 9999999754 899998 6445544 32110 11346799999 79999999999865
Q ss_pred ----CeEEEEEcCCCceEEeccCCCcceEEEE
Q 011333 221 ----RAIREIQLHFDDCAYQYGSSFPLGIAVL 248 (488)
Q Consensus 221 ----~rIrkI~~~g~~~~~~~~~g~P~GIav~ 248 (488)
+.|++++..+...........|.+++++
T Consensus 149 ~~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~ 180 (314)
T 1pjx_A 149 QEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVR 180 (314)
T ss_dssp SSSCEEEEEECTTSCEEEEEEEESSEEEEEEE
T ss_pred cCCCCeEEEECCCCCEEEeccCCCCcceEEEe
Confidence 6899999875443333444567888876
No 53
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.00 E-value=1.5e-08 Score=101.34 Aligned_cols=157 Identities=13% Similarity=0.090 Sum_probs=100.2
Q ss_pred CCCCCceEEEEccCCcEEEEECC-----CCeEEEEeCCCCcccc-cEEEecCCCCccccCCCcccccccCCcceEEEcC-
Q 011333 80 KLGIEPYSVEVLPGGELLILDSA-----NSNLYRISSSLSLYSR-PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD- 152 (488)
Q Consensus 80 ~~l~~P~GIaVd~dG~LYVaD~~-----n~rI~kid~~g~~~g~-i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~- 152 (488)
..+..|++|++|++|+|||+|.+ .++|+++++.+ ++ +.++.-.. .. ......|++|++|+
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t---g~~~~~~~~~~-~~---------~~~~~~~~~v~vd~~ 130 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN---NQLSRVIYLPP-PI---------TLSNSFVNDLAVDLI 130 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT---TEEEEEEECCT-TT---------SCTTCCCCEEEEETT
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC---CeEEEEEECCh-hh---------cccccccceEEEecC
Confidence 34669999999999999999987 58999999875 33 23332110 00 01245789999996
Q ss_pred CCcEEEEEC---CCCEEEEEc--CCCcEEEeCCccCCCC-C---CCCCCc-----ccc----cCCCCCeeEEECCCC-eE
Q 011333 153 RGNIYIADT---MNMAIRKIS--DSGVTTIAGGKWGRGG-G---HVDGPS-----EDA----KFSNDFDVVYIGSSC-SL 213 (488)
Q Consensus 153 dG~LYVAD~---~N~rIrkid--~ggVttIaGg~~g~~~-g---~~dG~~-----~~a----~f~~P~gIa~vd~~G-~L 213 (488)
+|.+||+|. .++.|.+++ .+.+..+..+...... . ..+|.. .+. ....|++|+ ++++| .|
T Consensus 131 ~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia-~s~dg~~l 209 (343)
T 2qe8_A 131 HNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV-LDAENEWL 209 (343)
T ss_dssp TTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE-ECTTSCEE
T ss_pred CCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE-eccCCCEE
Confidence 578999999 889999999 3555444432100000 0 001100 000 114689999 56666 79
Q ss_pred EEEECCCCeEEEEEcCC----C--------ceEEeccCCCcceEEEEec
Q 011333 214 LVIDRGNRAIREIQLHF----D--------DCAYQYGSSFPLGIAVLLA 250 (488)
Q Consensus 214 YVaD~gN~rIrkI~~~g----~--------~~~~~~~~g~P~GIav~~g 250 (488)
|+++...++|++++... . ........+.|.||+++..
T Consensus 210 y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~ 258 (343)
T 2qe8_A 210 YLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD 258 (343)
T ss_dssp EEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT
T ss_pred EEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC
Confidence 99999999999998531 1 0011123457999999954
No 54
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.98 E-value=5.5e-09 Score=107.52 Aligned_cols=145 Identities=11% Similarity=0.091 Sum_probs=101.3
Q ss_pred CCceEEEEcc--CC--cEEEEECC--CCe--EEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC
Q 011333 83 IEPYSVEVLP--GG--ELLILDSA--NSN--LYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 154 (488)
Q Consensus 83 ~~P~GIaVd~--dG--~LYVaD~~--n~r--I~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG 154 (488)
.+|+||.+.. +| .|||+|+. +++ |++++.++ ...+++....+ .+|+.|+++++|++|
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~----~~~~~~~~~~g-----------~~~~~pND~~v~~~G 176 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEE----KSLLHLKTIRH-----------KLLPSVNDIVAVGPE 176 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTT----TEEEEEEEECC-----------TTCSSEEEEEEEETT
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCC----CEEEEEecccc-----------CCCCCCceEEEeCCC
Confidence 4899999965 45 59999987 344 56666664 23344433211 248999999999999
Q ss_pred cEEEEEC-----------------CCCEEEEEcCCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEE
Q 011333 155 NIYIADT-----------------MNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVID 217 (488)
Q Consensus 155 ~LYVAD~-----------------~N~rIrkid~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD 217 (488)
.+||++. ...+|.+++.+.++.++.+ +..|+||++.++...|||+|
T Consensus 177 ~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~-----------------l~~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 177 HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEG-----------------FDFANGINISPDGKYVYIAE 239 (355)
T ss_dssp EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEE-----------------ESSEEEEEECTTSSEEEEEE
T ss_pred CEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecC-----------------CcccCcceECCCCCEEEEEe
Confidence 9999875 2467888887677666532 66899999544444899999
Q ss_pred CCCCeEEEEEcCCCceE----EeccCCCcceEEEEecCCceEEEEEEEE
Q 011333 218 RGNRAIREIQLHFDDCA----YQYGSSFPLGIAVLLAAGFFGYMLALLQ 262 (488)
Q Consensus 218 ~gN~rIrkI~~~g~~~~----~~~~~g~P~GIav~~g~g~~Gy~~a~l~ 262 (488)
+..++|++++.+.+... .....+.|+||+++.. .|.+|+...
T Consensus 240 t~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e---~G~lwva~~ 285 (355)
T 3sre_A 240 LLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPV---TGDLWVGCH 285 (355)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTT---TCCEEEEEE
T ss_pred CCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCC---CCcEEEEec
Confidence 99999999998743211 2233478999999952 245555444
No 55
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.89 E-value=3.6e-08 Score=94.76 Aligned_cols=132 Identities=14% Similarity=0.130 Sum_probs=95.4
Q ss_pred CCceEEEEccCCcEEEEECCC---------------CeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcce
Q 011333 83 IEPYSVEVLPGGELLILDSAN---------------SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKG 147 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~n---------------~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~G 147 (488)
..|.+|+++++|+|||++..+ +.|+++++++ .+..+... +..|++
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g----~~~~~~~~----------------~~~~~~ 176 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG----QMIQVDTA----------------FQFPNG 176 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS----CEEEEEEE----------------ESSEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCC----CEEEeccC----------------CCCcce
Confidence 469999999999999999765 6899999873 33333321 456899
Q ss_pred EEEc----CCC-cEEEEECCCCEEEEEc-C--CCcE---EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEE
Q 011333 148 LTVD----DRG-NIYIADTMNMAIRKIS-D--SGVT---TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVI 216 (488)
Q Consensus 148 IAvD----~dG-~LYVAD~~N~rIrkid-~--ggVt---tIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVa 216 (488)
|+++ ++| .|||+|..+++|.+++ + +.+. .+.... + ..+..|.+|+ ++++|+|||+
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~------------~~~~~p~~i~-~d~~G~l~v~ 242 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-G------------THEGGADGMD-FDEDNNLLVA 242 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-C------------CSSCEEEEEE-EBTTCCEEEE
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC-C------------CCCCCCCceE-ECCCCCEEEE
Confidence 9999 999 6999999999999998 2 3332 222110 0 0124688998 7999999999
Q ss_pred ECCCCeEEEEEcC-CCceEE-eccCCCcceEEEE
Q 011333 217 DRGNRAIREIQLH-FDDCAY-QYGSSFPLGIAVL 248 (488)
Q Consensus 217 D~gN~rIrkI~~~-g~~~~~-~~~~g~P~GIav~ 248 (488)
+..++.|.++++. +..... ......|.+++++
T Consensus 243 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~ 276 (314)
T 1pjx_A 243 NWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFK 276 (314)
T ss_dssp EETTTEEEEECTTCBSCSEEEECSSSCEEEEEEC
T ss_pred EcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEEC
Confidence 9999999999988 543332 2233567788874
No 56
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.86 E-value=7.7e-08 Score=97.88 Aligned_cols=166 Identities=13% Similarity=0.090 Sum_probs=106.0
Q ss_pred cCCceeEEeecCCCCCCCceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCc
Q 011333 67 ESGYTVETVFDGSKLGIEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHP 145 (488)
Q Consensus 67 ~dG~~~~~~~~G~~~l~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P 145 (488)
.+|+.++....+ +..|.+|+++++|+ |||++.. ++|++++.++.. ...+++...-. ......|
T Consensus 5 p~g~~~~~va~~---l~~P~~i~~~pdG~~l~V~e~~-G~i~~~~~~g~~---~~~~~~~~~v~---------~~g~~g~ 68 (353)
T 2g8s_A 5 PATVNVEVLQDK---LDHPWALAFLPDNHGMLITLRG-GELRHWQAGKGL---SAPLSGVPDVW---------AHGQGGL 68 (353)
T ss_dssp -CCSEEEEEEEE---ESSEEEEEECSTTCCEEEEETT-TEEEEEETTTEE---CCCCBSCCCCC---------CSTTCSE
T ss_pred CCCcEEEEEECC---CCCcEEEEEcCCCCEEEEEeCC-ceEEEEeCCCce---eeEecCCcccc---------cCCCCCc
Confidence 356666666553 56999999999999 9999984 899999976421 11222211000 0113468
Q ss_pred ceEEEcC----CCcEEEEECC-------CCEEEEEc-C-C--C---cEEEe-CCccCCCCCCCCCCcccccCCCCCeeEE
Q 011333 146 KGLTVDD----RGNIYIADTM-------NMAIRKIS-D-S--G---VTTIA-GGKWGRGGGHVDGPSEDAKFSNDFDVVY 206 (488)
Q Consensus 146 ~GIAvD~----dG~LYVAD~~-------N~rIrkid-~-g--g---VttIa-Gg~~g~~~g~~dG~~~~a~f~~P~gIa~ 206 (488)
.||++++ +|.|||+++. .++|.+++ + + . ..++. +... .......+.+|+
T Consensus 69 ~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-----------~~~~~h~~~~l~- 136 (353)
T 2g8s_A 69 LDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPK-----------LSTGNHFGGRLV- 136 (353)
T ss_dssp EEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSC-----------CBSSSCCCCCEE-
T ss_pred eeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCC-----------CCCCcccCccEE-
Confidence 9999998 5899999865 46888886 2 2 1 22232 2110 012245688998
Q ss_pred ECCCCeEEEEECC-------------CCeEEEEEcCCC--------------ceEEeccCCCcceEEEEecCCceEEEEE
Q 011333 207 IGSSCSLLVIDRG-------------NRAIREIQLHFD--------------DCAYQYGSSFPLGIAVLLAAGFFGYMLA 259 (488)
Q Consensus 207 vd~~G~LYVaD~g-------------N~rIrkI~~~g~--------------~~~~~~~~g~P~GIav~~g~g~~Gy~~a 259 (488)
++++|.|||+... .++|.+|++++. ...+..+...|.|++++.. .|.+++
T Consensus 137 ~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~---~g~l~~ 213 (353)
T 2g8s_A 137 FDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPW---SNALWL 213 (353)
T ss_dssp ECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETT---TTEEEE
T ss_pred ECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECC---CCCEEE
Confidence 7899999999633 368999999874 2234455566888988853 234554
Q ss_pred EEEe
Q 011333 260 LLQR 263 (488)
Q Consensus 260 ~l~~ 263 (488)
.-..
T Consensus 214 ~d~g 217 (353)
T 2g8s_A 214 NEHG 217 (353)
T ss_dssp EEEC
T ss_pred EecC
Confidence 4443
No 57
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=8e-08 Score=96.00 Aligned_cols=123 Identities=11% Similarity=0.085 Sum_probs=86.4
Q ss_pred CCceEEEEccCCcEEEEECC--C--CeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEE
Q 011333 83 IEPYSVEVLPGGELLILDSA--N--SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYI 158 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~--n--~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYV 158 (488)
..|.+|+++++|++||+... . .+|.+++ + +.+..+.... . + ....|..|.||++|++|+|||
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~----g~~~~~p~~~--~----~---~~~~~~~p~gv~~d~~g~L~v 82 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-Q----DGLIPFPPQS--G----N---AIITFDTVLGIKSDGNGIVWM 82 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-T----TEEEESCCCC--S----S---CCCCCSCEEEEEECSSSEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-C----CCeecCCCcc--c----C---cccceeEeeEEEEcCCCcEEE
Confidence 47999999999999999642 2 3899998 5 3333332110 0 0 113488999999999999999
Q ss_pred EECC-----CCEEEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEEC-CCCeEEEEEC---CCCeEEEE
Q 011333 159 ADTM-----NMAIRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIG-SSCSLLVIDR---GNRAIREI 226 (488)
Q Consensus 159 AD~~-----N~rIrkid-~-gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd-~~G~LYVaD~---gN~rIrkI 226 (488)
+|.+ .++|.+++ . +. +.++...... ......|++|+ ++ .++.+||+|. .++.|.++
T Consensus 83 ~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~-----------~~~~~~~~~v~-vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 83 LDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI-----------TLSNSFVNDLA-VDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EECHHHHTSCCEEEEEETTTTEEEEEEECCTTT-----------SCTTCCCCEEE-EETTTTEEEEEECCSGGGCEEEEE
T ss_pred EcCCCCcCCCCeEEEEECCCCeEEEEEECChhh-----------cccccccceEE-EecCCCEEEEEcCccCCCCeEEEE
Confidence 9987 58999999 3 55 3444321110 01234689999 55 5689999999 88999999
Q ss_pred EcCCC
Q 011333 227 QLHFD 231 (488)
Q Consensus 227 ~~~g~ 231 (488)
++...
T Consensus 151 d~~~g 155 (343)
T 2qe8_A 151 DLQTG 155 (343)
T ss_dssp ETTTC
T ss_pred ECCCC
Confidence 98743
No 58
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.82 E-value=1.5e-07 Score=91.84 Aligned_cols=136 Identities=9% Similarity=0.038 Sum_probs=95.3
Q ss_pred CCceEEEEccCCcEEEEECC------CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-
Q 011333 83 IEPYSVEVLPGGELLILDSA------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN- 155 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~------n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~- 155 (488)
..|.+++++++|+|||++.. ++.|++++.++ +.+..+... +..|++|+++++|+
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~----------------~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF---RTVTPIIQN----------------ISVANGIALSTDEKV 195 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS---CCEEEEEEE----------------ESSEEEEEECTTSSE
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCC---CEEEEeecC----------------CCcccceEECCCCCE
Confidence 46899999999999999875 47899999875 233333221 45689999999996
Q ss_pred EEEEECCCCEEEEEc-C--CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 156 IYIADTMNMAIRKIS-D--SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 156 LYVAD~~N~rIrkid-~--gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
|||+|..+++|.+++ + +. +..+....... . .....|.+|+ ++++|+|||++.++++|+++++.+.
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~-~---------~~~~~~~~i~-~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPYY-F---------TGHEGPDSCC-IDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEE-C---------CSSSEEEEEE-EBTTCCEEEEEETTTEEEEECTTSC
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEEe-c---------CCCCCCCceE-ECCCCCEEEEEcCCCEEEEECCCCC
Confidence 999999889999998 2 33 33221000000 0 0013688898 7999999999999999999998765
Q ss_pred ceEEeccC-C------CcceEEEE
Q 011333 232 DCAYQYGS-S------FPLGIAVL 248 (488)
Q Consensus 232 ~~~~~~~~-g------~P~GIav~ 248 (488)
........ . .|.++++.
T Consensus 265 ~~~~~~~~~~~~g~~~~~~~~~~~ 288 (333)
T 2dg1_A 265 PIGQILIPGRDEGHMLRSTHPQFI 288 (333)
T ss_dssp EEEEEECTTGGGTCSCBCCEEEEC
T ss_pred EEEEEEcCCCccccccCcceEEEC
Confidence 43332211 1 57888885
No 59
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.82 E-value=1.3e-07 Score=93.94 Aligned_cols=135 Identities=10% Similarity=0.054 Sum_probs=97.6
Q ss_pred CCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 82 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 82 l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
+..|.+|+++++|.|||++..++.|.++|+.+. ++...... +. ...++..|.+|++ .++.|||++.
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~---~~~~~i~~--g~--------~~~~~~~p~~i~~-~~~~lyv~~~ 148 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY---EITGYIEC--PD--------MDMESGSTEQMVQ-YGKYVYVNCW 148 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT---EEEEEEEC--TT--------CCTTTCBCCCEEE-ETTEEEEEEC
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC---eEEEEEEc--CC--------ccccCCCcceEEE-ECCEEEEEcC
Confidence 458999999889999999977889999999863 33322211 10 0123567999999 5789999998
Q ss_pred C-CCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC----------CeEEEEE
Q 011333 162 M-NMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN----------RAIREIQ 227 (488)
Q Consensus 162 ~-N~rIrkid--~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN----------~rIrkI~ 227 (488)
+ .+.|.+|| .+.+ .++..+ ..|.+|+ ++++|++||++.++ +.|.+|+
T Consensus 149 ~~~~~v~viD~~t~~~~~~i~~g------------------~~p~~i~-~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 149 SYQNRILKIDTETDKVVDELTIG------------------IQPTSLV-MDKYNKMWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp TTCCEEEEEETTTTEEEEEEECS------------------SCBCCCE-ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEEEcC------------------CCccceE-EcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence 4 89999999 3443 333321 2588998 78899999999886 8999999
Q ss_pred cCCCceEE-ecc--CCCcceEEEEe
Q 011333 228 LHFDDCAY-QYG--SSFPLGIAVLL 249 (488)
Q Consensus 228 ~~g~~~~~-~~~--~g~P~GIav~~ 249 (488)
+....... ... ...|.+++++.
T Consensus 210 ~~t~~v~~~~~~~~g~~p~~la~~~ 234 (328)
T 3dsm_A 210 AETFTVEKQFKFKLGDWPSEVQLNG 234 (328)
T ss_dssp TTTTEEEEEEECCTTCCCEEEEECT
T ss_pred CCCCeEEEEEecCCCCCceeEEEec
Confidence 87654432 211 23699999985
No 60
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.81 E-value=1.4e-07 Score=96.69 Aligned_cols=163 Identities=18% Similarity=0.168 Sum_probs=107.8
Q ss_pred eeEEeecCCCCCCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEE
Q 011333 71 TVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV 150 (488)
Q Consensus 71 ~~~~~~~G~~~l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAv 150 (488)
..+....+ +..|++|++.+||.|||++...++|++++.++ +....+.+...-. ......|.|||+
T Consensus 23 ~~~~va~g---L~~P~~ia~~pdG~llVter~~G~I~~v~~~~---g~~~~v~~~~~v~---------~~g~~GllGia~ 87 (347)
T 3das_A 23 VLRTVATG---LNSPWGLAPLPGGDLLVSSRDEATITRVDAKT---GRKTELGEVPGVS---------PSGEGGLLGIAL 87 (347)
T ss_dssp EEEEEECC---CSSEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCC---------CBTTBSEEEEEE
T ss_pred eeEEeecC---CCCceEEEEcCCCcEEEEEecCCEEEEEECCC---CcEeeecccCcee---------ecCCCCceeeEe
Confidence 34444443 56999999999999999999889999998764 3334443321000 011456899999
Q ss_pred cC----CCcEEEEEC--CCCEEEEEc-CC------C---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEE
Q 011333 151 DD----RGNIYIADT--MNMAIRKIS-DS------G---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLL 214 (488)
Q Consensus 151 D~----dG~LYVAD~--~N~rIrkid-~g------g---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LY 214 (488)
++ +|.|||+.+ ..++|.++. ++ . ..+|...-.. ........|+ ++++|.||
T Consensus 88 ~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~------------~~~H~g~~l~-fgpDG~Ly 154 (347)
T 3das_A 88 SPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK------------GVIHNGGRIA-FGPDKMLY 154 (347)
T ss_dssp CTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC------------CSSCCCCCEE-ECTTSCEE
T ss_pred ccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC------------CCCccCcccc-CCCCCCEE
Confidence 98 488999764 457888887 32 1 2333321100 1234567798 78999999
Q ss_pred EEEC-------------CCCeEEEEEcCCC---------ceEEeccCCCcceEEEEecCCceEEEEEEEEecc
Q 011333 215 VIDR-------------GNRAIREIQLHFD---------DCAYQYGSSFPLGIAVLLAAGFFGYMLALLQRRV 265 (488)
Q Consensus 215 VaD~-------------gN~rIrkI~~~g~---------~~~~~~~~g~P~GIav~~g~g~~Gy~~a~l~~~~ 265 (488)
|+-- ..++|.+|+++|. ...+..+...|.|++++.. |.+|+.-..+.
T Consensus 155 vt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~----G~L~~~d~g~~ 223 (347)
T 3das_A 155 AGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDK----QRLFASEFGQD 223 (347)
T ss_dssp EECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTT----CCEEEEECCSS
T ss_pred EEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCC----CCEEEEecCCC
Confidence 9942 3589999999875 1244566667999999852 55666655543
No 61
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.79 E-value=1.9e-07 Score=91.05 Aligned_cols=134 Identities=16% Similarity=0.169 Sum_probs=96.3
Q ss_pred CCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 83 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
..|.+++++++|+||+++..++.|++++.++ +.+..+.... -..|.+|++|++|+|||++..
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~---~~~~~~~~~~---------------~~~~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVFEGNIFKINPET---KEIKRPFVSH---------------KANPAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp CCEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECS---------------SSSEEEEEECTTSCEEEEECT
T ss_pred ccccCcEECCCCCEEEEECCCCEEEEEeCCC---CcEEEEeeCC---------------CCCcceEEECCCCcEEEEeCC
Confidence 3689999999999999999899999999886 3344332110 235899999999999999987
Q ss_pred C----CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC------CCeEEEEEcCC
Q 011333 163 N----MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG------NRAIREIQLHF 230 (488)
Q Consensus 163 N----~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g------N~rIrkI~~~g 230 (488)
+ +.|.+++ +++ +..+..... ....|++|+ ++++|+|||++.. +..|++++..+
T Consensus 107 ~~~~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 107 DFKSTGGIFAATENGDNLQDIIEDLS--------------TAYCIDDMV-FDSKGGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp TSSSCCEEEEECTTSCSCEEEECSSS--------------SCCCEEEEE-ECTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCCCCceEEEEeCCCCEEEEEEccCc--------------cCCcccceE-ECCCCCEEEEeccccccCCCceEEEEeCCC
Confidence 6 7999999 444 443332100 124688998 7889999999975 57899998875
Q ss_pred CceE-EeccCCCcceEEEEe
Q 011333 231 DDCA-YQYGSSFPLGIAVLL 249 (488)
Q Consensus 231 ~~~~-~~~~~g~P~GIav~~ 249 (488)
.... .......|.+++++.
T Consensus 172 ~~~~~~~~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 172 RTVTPIIQNISVANGIALST 191 (333)
T ss_dssp CCEEEEEEEESSEEEEEECT
T ss_pred CEEEEeecCCCcccceEECC
Confidence 4332 223334577777764
No 62
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.78 E-value=1.3e-07 Score=100.06 Aligned_cols=158 Identities=18% Similarity=0.230 Sum_probs=105.6
Q ss_pred ccCCceeEEeecCCCCCCCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCc
Q 011333 66 FESGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHP 145 (488)
Q Consensus 66 ~~dG~~~~~~~~G~~~l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P 145 (488)
..+|+.++....+ +..|++|+++++|+|||++...++|++++..+ +....++.-...... ..-...+
T Consensus 13 ~~~gf~~~~~a~~---l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~---g~~~~~~~~~~~~~~-------~~g~~Gl 79 (454)
T 1cru_A 13 KSENFDKKVILSN---LNKPHALLWGPDNQIWLTERATGKILRVNPES---GSVKTVFQVPEIVND-------ADGQNGL 79 (454)
T ss_dssp CCTTSCEEEEECC---CSSEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCCCC-------TTSSCSE
T ss_pred CCCCeEEEEEECC---CCCceEEEEcCCCcEEEEEcCCCEEEEEECCC---CcEeEEecCCccccc-------cCCCCce
Confidence 3466777776654 66999999999999999999878999998754 344444432111100 0013457
Q ss_pred ceEEEcC----CCcEEEEECC------------CCEEEEEc-C-C--Cc---EEEeCCccCCCCCCCCCCcccccCCCCC
Q 011333 146 KGLTVDD----RGNIYIADTM------------NMAIRKIS-D-S--GV---TTIAGGKWGRGGGHVDGPSEDAKFSNDF 202 (488)
Q Consensus 146 ~GIAvD~----dG~LYVAD~~------------N~rIrkid-~-g--gV---ttIaGg~~g~~~g~~dG~~~~a~f~~P~ 202 (488)
.|||+++ +|.|||+++. ..+|.+++ + + .+ .++...-.. .....+.
T Consensus 80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~------------~~~H~~~ 147 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS------------SKDHQSG 147 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC------------CSSCCEE
T ss_pred eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC------------CCCCCCC
Confidence 7999998 7899999964 46888887 2 2 12 233321000 1245688
Q ss_pred eeEEECCCCeEEEEEC--C------------------------------CCeEEEEEcCCC------------ceEEecc
Q 011333 203 DVVYIGSSCSLLVIDR--G------------------------------NRAIREIQLHFD------------DCAYQYG 238 (488)
Q Consensus 203 gIa~vd~~G~LYVaD~--g------------------------------N~rIrkI~~~g~------------~~~~~~~ 238 (488)
+|+ ++++|.|||+-. + .++|.+|+++|. ...+..+
T Consensus 148 ~l~-f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G 226 (454)
T 1cru_A 148 RLV-IGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLG 226 (454)
T ss_dssp EEE-ECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBC
T ss_pred eEe-ECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEEC
Confidence 999 799999999843 2 368999999875 1234556
Q ss_pred CCCcceEEEEe
Q 011333 239 SSFPLGIAVLL 249 (488)
Q Consensus 239 ~g~P~GIav~~ 249 (488)
...|.|++++.
T Consensus 227 ~RNp~gla~dp 237 (454)
T 1cru_A 227 HRNPQGLAFTP 237 (454)
T ss_dssp CSEEEEEEECT
T ss_pred CCCcceEEECC
Confidence 66788888885
No 63
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.71 E-value=1.9e-07 Score=92.80 Aligned_cols=127 Identities=13% Similarity=0.097 Sum_probs=89.8
Q ss_pred CceEEEEccCCcEEEEECC-CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 84 EPYSVEVLPGGELLILDSA-NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~-n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
.|.+|++ .++.|||++.+ .+.|.+||..+. .+...+.. -..|.+|++|++|++||++..
T Consensus 132 ~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~---~~~~~i~~----------------g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 132 STEQMVQ-YGKYVYVNCWSYQNRILKIDTETD---KVVDELTI----------------GIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp BCCCEEE-ETTEEEEEECTTCCEEEEEETTTT---EEEEEEEC----------------SSCBCCCEECTTSEEEEEBCC
T ss_pred CcceEEE-ECCEEEEEcCCCCCEEEEEECCCC---eEEEEEEc----------------CCCccceEEcCCCCEEEEECC
Confidence 7999999 57899999984 889999998753 22222111 135899999999999999987
Q ss_pred C----------CEEEEEcC--CCcE-EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 163 N----------MAIRKISD--SGVT-TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 163 N----------~rIrkid~--ggVt-tIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
+ +.|.+||. +.+. ++. ...+ ..|++|++.++.+.|||++. .|.+|+..
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~-~~~g---------------~~p~~la~~~d~~~lyv~~~---~v~~~d~~ 252 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFK-FKLG---------------DWPSEVQLNGTRDTLYWINN---DIWRMPVE 252 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEE-CCTT---------------CCCEEEEECTTSCEEEEESS---SEEEEETT
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEe-cCCC---------------CCceeEEEecCCCEEEEEcc---EEEEEECC
Confidence 6 89999993 3343 332 1100 26899995445678999986 89999987
Q ss_pred CCceEE---ec-cCCCcceEEEEe
Q 011333 230 FDDCAY---QY-GSSFPLGIAVLL 249 (488)
Q Consensus 230 g~~~~~---~~-~~g~P~GIav~~ 249 (488)
...... .. +...|.||+++.
T Consensus 253 t~~~~~~~~~~~~~~~p~gi~vdp 276 (328)
T 3dsm_A 253 ADRVPVRPFLEFRDTKYYGLTVNP 276 (328)
T ss_dssp CSSCCSSCSBCCCSSCEEEEEECT
T ss_pred CCceeeeeeecCCCCceEEEEEcC
Confidence 543321 11 135799999985
No 64
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.68 E-value=2.1e-07 Score=94.86 Aligned_cols=128 Identities=13% Similarity=0.093 Sum_probs=82.4
Q ss_pred CCCceEEEEccC----CcEEEEECC---C----CeEEEEeCCCC--cccccEEEecCCCCccccCCCcccccccCCcceE
Q 011333 82 GIEPYSVEVLPG----GELLILDSA---N----SNLYRISSSLS--LYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGL 148 (488)
Q Consensus 82 l~~P~GIaVd~d----G~LYVaD~~---n----~rI~kid~~g~--~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GI 148 (488)
...|.||+++++ |.|||++.. + ++|.+++.++. ......+++... . ....+.|.+|
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~---~--------~~~~h~~~~l 140 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGI---P--------GAYIHNGGRI 140 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEE---E--------CCSSCCCCCE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcC---C--------CCCCcCCceE
Confidence 347999999996 899999864 3 79999997753 111222332210 0 0125678999
Q ss_pred EEcCCCcEEEEECC-------------CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeE
Q 011333 149 TVDDRGNIYIADTM-------------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSL 213 (488)
Q Consensus 149 AvD~dG~LYVAD~~-------------N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~-~G~L 213 (488)
+++++|.|||++.. +.+|.+|+ ++.+. .+.+ +........-+.+|++|+ +++ +|.|
T Consensus 141 ~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p--~~np------f~~~~i~a~G~rnp~Gla-~d~~~g~l 211 (354)
T 3a9g_A 141 RFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP--ADNP------FPNSPIWSYGHRNPQGID-WHRASGVM 211 (354)
T ss_dssp EECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC--TTSS------STTCCEEEECCSCCCEEE-ECTTTCCE
T ss_pred EECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC--CCCC------CCCCcEEEEccCCcceEE-EeCCCCCE
Confidence 99999999999642 35899998 54421 0000 000011112367899999 677 8999
Q ss_pred EEEECCCCe---EEEEEcC
Q 011333 214 LVIDRGNRA---IREIQLH 229 (488)
Q Consensus 214 YVaD~gN~r---IrkI~~~ 229 (488)
||+|.+.++ |..|...
T Consensus 212 ~v~d~g~~~~dei~~i~~G 230 (354)
T 3a9g_A 212 VATEHGPVGHDEVNIILKG 230 (354)
T ss_dssp EEEECCSSSCCEEEEECTT
T ss_pred EEEecCCCCCcEEEEecCC
Confidence 999998765 6666543
No 65
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.64 E-value=7.6e-07 Score=88.35 Aligned_cols=130 Identities=13% Similarity=0.154 Sum_probs=90.5
Q ss_pred CCceEEEEccCCcEEEEECC------CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-
Q 011333 83 IEPYSVEVLPGGELLILDSA------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN- 155 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~------n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~- 155 (488)
..+.+++++++|+|||++.. .+.|++++ + +.+..+... +..|++|+++++|+
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~----g~~~~~~~~----------------~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K----GKVTKLFAD----------------ISIPNSICFSPDGTT 192 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T----TEEEEEEEE----------------ESSEEEEEECTTSCE
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C----CcEEEeeCC----------------CcccCCeEEcCCCCE
Confidence 46889999999999998753 46899998 5 344443221 44689999999995
Q ss_pred EEEEECCCCEEEEEc-C--CC--c---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEE
Q 011333 156 IYIADTMNMAIRKIS-D--SG--V---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQ 227 (488)
Q Consensus 156 LYVAD~~N~rIrkid-~--gg--V---ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~ 227 (488)
||++|+.+++|.+++ + ++ + ..+.... .....|.+++ +|.+|+|||++.++++|.+++
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~--------------~~~~~p~gi~-~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST--------------GIKGGMDGSV-CDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT--------------TSSSEEEEEE-ECTTSCEEEEEETTTEEEEEC
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECC--------------CCCCCCCeeE-ECCCCCEEEEEeCCCEEEEEC
Confidence 999999999999998 3 22 1 1221100 0112578898 799999999999889999999
Q ss_pred cCCCceEEe-ccCCCcceEEEE
Q 011333 228 LHFDDCAYQ-YGSSFPLGIAVL 248 (488)
Q Consensus 228 ~~g~~~~~~-~~~g~P~GIav~ 248 (488)
+.+...... .....|.++++.
T Consensus 258 ~~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 258 TDGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp TTCCEEEEEECSCSBEEEEEEE
T ss_pred CCCCEEEEEECCCCCcEEEEEe
Confidence 876543322 222245566655
No 66
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.64 E-value=1.7e-06 Score=88.23 Aligned_cols=132 Identities=19% Similarity=0.165 Sum_probs=86.1
Q ss_pred CceEEEE---ccCCcEEE-EEC------------CCCeEEEEeCCCCcccccEEEecCCCCccccCCC--cccccccCCc
Q 011333 84 EPYSVEV---LPGGELLI-LDS------------ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDG--KPREARMNHP 145 (488)
Q Consensus 84 ~P~GIaV---d~dG~LYV-aD~------------~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG--~a~~a~Ln~P 145 (488)
.|.||.+ |++|.|+| +|. +.+.|.++++.+..-++....+.-. +..++ ......+..|
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~----~~~~~~~~~~g~~~~~~ 139 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFE----KVQDEFEKKAGKRPFGV 139 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESH----HHHHHHHHHHSSCCEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCc----cccccccccccccccCC
Confidence 6789999 78999998 562 3578999998821113333333310 00000 0000124468
Q ss_pred ceEEEcCCCcEEEEECCC-CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCe
Q 011333 146 KGLTVDDRGNIYIADTMN-MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRA 222 (488)
Q Consensus 146 ~GIAvD~dG~LYVAD~~N-~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~r 222 (488)
++|++|++||+||+|+.. ..|.|++ +|. +..+.-... .......++||++.+....|+|++. .++
T Consensus 140 nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~-----------~~~~~~G~nGIv~~pdg~~Liv~~~-~g~ 207 (334)
T 2p9w_A 140 VQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESG-----------NGGQRPGYSGITFDPHSNKLIAFGG-PRA 207 (334)
T ss_dssp EEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCC-----------CSSSCCSCSEEEEETTTTEEEEESS-SSS
T ss_pred ceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCC-----------CcccccCcceEEEeCCCCEEEEEcC-CCe
Confidence 999999999999999999 9999999 555 333321110 0112456899997655557888888 999
Q ss_pred EEEEEcCCC
Q 011333 223 IREIQLHFD 231 (488)
Q Consensus 223 IrkI~~~g~ 231 (488)
|.+|++...
T Consensus 208 L~~fD~~~p 216 (334)
T 2p9w_A 208 LTAFDVSKP 216 (334)
T ss_dssp EEEEECSSS
T ss_pred EEEEcCCCC
Confidence 999998743
No 67
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.57 E-value=3.9e-06 Score=81.27 Aligned_cols=140 Identities=14% Similarity=0.153 Sum_probs=93.1
Q ss_pred CceEEEEccCCc-EEEEECC------CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-
Q 011333 84 EPYSVEVLPGGE-LLILDSA------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN- 155 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~------n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~- 155 (488)
.|.+++++++|. ||+++.. .+.|++++..+. ++...... -..|.+++++++|+
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~---~~~~~~~~----------------~~~~~~~~~s~dg~~ 102 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL---EVTQAIHN----------------DLKPFGATINNTTQT 102 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC---CEEEEEEE----------------SSCCCSEEEETTTTE
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC---eEEEEEec----------------CCCcceEEECCCCCE
Confidence 688999999875 9999876 568999998753 22222111 12488999999997
Q ss_pred EEEEECCCCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC-CCCeEEEEEcCCC
Q 011333 156 IYIADTMNMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR-GNRAIREIQLHFD 231 (488)
Q Consensus 156 LYVAD~~N~rIrkid--~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~-gN~rIrkI~~~g~ 231 (488)
+||++..++.|..++ .+.+ .++..+.... ........|.++++.++.+.||+++. .+++|+.+++...
T Consensus 103 l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~ 174 (353)
T 3vgz_A 103 LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR--------TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI 174 (353)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEESCCCCC--------CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT
T ss_pred EEEEecCCCEEEEEeCCCCeeEEEEecCCCcc--------ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC
Confidence 999999999999999 3443 4443321100 00111234788996555567999995 4788999998865
Q ss_pred ceEEe-c-cCCCcceEEEEec
Q 011333 232 DCAYQ-Y-GSSFPLGIAVLLA 250 (488)
Q Consensus 232 ~~~~~-~-~~g~P~GIav~~g 250 (488)
..... . ....|.++++...
T Consensus 175 ~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 175 KLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp EEEEEECCCCTTCCCCEEETT
T ss_pred ceEEEecCCCCccceEEECCC
Confidence 54432 2 2234788887644
No 68
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.54 E-value=1.2e-06 Score=85.77 Aligned_cols=125 Identities=16% Similarity=0.161 Sum_probs=84.8
Q ss_pred CCceEEEEccCCcEEEEECC--CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEE
Q 011333 83 IEPYSVEVLPGGELLILDSA--NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 159 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~--n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVA 159 (488)
..|.+|++++||.||+++.. ++.|+.++.+++ ....+... ......|.+|+++++|+ ||++
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g---~~~~~~~~-------------~~~~~~p~~~a~spdg~~l~~~ 103 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQ---TAHKLNTV-------------VAPGTPPAYVAVDEARQLVYSA 103 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETT---EEEEEEEE-------------EEESCCCSEEEEETTTTEEEEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCC---cEEEeeee-------------ecCCCCCEEEEECCCCCEEEEE
Confidence 37999999999999999853 678999987652 32222110 01134699999999997 9999
Q ss_pred ECCCCEEEEEc---CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 160 DTMNMAIRKIS---DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 160 D~~N~rIrkid---~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
+..++.|+.++ ++....+..... .+ .++........|.+++ ++++|+||+++.+++.|+.+++.
T Consensus 104 ~~~~~~v~v~~~~~~g~~~~~~~~~~---~~--~~p~~~~~~~~~~~~~-~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 104 NYHKGTAEVMKIAADGALTLTDTVQH---SG--HGPRPEQDGSHIHYTD-LTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEEC---CC--CCSSTTCSSCCEEEEE-ECTTSCEEEEETTTTEEEEEEEC
T ss_pred eCCCCEEEEEEeCCCCCeeecceeec---CC--CCCCccccCCCceEEE-ECCCCcEEEEeCCCCEEEEEEEC
Confidence 98888888887 233433321100 00 0111112345678898 67888899999999999999987
No 69
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.53 E-value=1.7e-06 Score=85.89 Aligned_cols=133 Identities=11% Similarity=0.053 Sum_probs=91.9
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC-
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM- 162 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~- 162 (488)
.|.+++++++|++||+. .+.|++++..+ +.+..+.....+ ...+.|+++++|++|++||++..
T Consensus 91 ~v~~i~~~~dg~l~v~~--~~gl~~~d~~~---g~~~~~~~~~~~-----------~~~~~~~~i~~d~~G~l~v~~~~~ 154 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS--DDGLFLRDTAT---GVLTLHAELESD-----------LPGNRSNDGRMHPSGALWIGTMGR 154 (326)
T ss_dssp CEEEEEEEETTEEEEEE--TTEEEEEETTT---CCEEEEECSSTT-----------CTTEEEEEEEECTTSCEEEEEEET
T ss_pred cceEEEEeCCCeEEEEE--CCCEEEEECCC---CcEEEEeeCCCC-----------CCCCCCCCEEECCCCCEEEEeCCC
Confidence 68899999999999997 34699999875 445555432100 12456899999999999999853
Q ss_pred -----CCEEEEEcCCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcC---C-Cc
Q 011333 163 -----NMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLH---F-DD 232 (488)
Q Consensus 163 -----N~rIrkid~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gN~rIrkI~~~---g-~~ 232 (488)
...|.+++++.+..+... +..|++++ ++++| .|||+|+.+++|++++.+ | ..
T Consensus 155 ~~~~~~~~l~~~~~g~~~~~~~~-----------------~~~~~~i~-~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~ 216 (326)
T 2ghs_A 155 KAETGAGSIYHVAKGKVTKLFAD-----------------ISIPNSIC-FSPDGTTGYFVDTKVNRLMRVPLDARTGLPT 216 (326)
T ss_dssp TCCTTCEEEEEEETTEEEEEEEE-----------------ESSEEEEE-ECTTSCEEEEEETTTCEEEEEEBCTTTCCBS
T ss_pred cCCCCceEEEEEeCCcEEEeeCC-----------------CcccCCeE-EcCCCCEEEEEECCCCEEEEEEcccccCCcc
Confidence 367888884445444321 33578999 56666 699999999999999975 2 11
Q ss_pred ---eEEe---ccCCCcceEEEEec
Q 011333 233 ---CAYQ---YGSSFPLGIAVLLA 250 (488)
Q Consensus 233 ---~~~~---~~~g~P~GIav~~g 250 (488)
.... ...+.|.|++++..
T Consensus 217 ~~~~~~~~~~~~~~~p~gi~~d~~ 240 (326)
T 2ghs_A 217 GKAEVFIDSTGIKGGMDGSVCDAE 240 (326)
T ss_dssp SCCEEEEECTTSSSEEEEEEECTT
T ss_pred cCceEEEECCCCCCCCCeeEECCC
Confidence 1111 12356889988854
No 70
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.50 E-value=2.6e-06 Score=83.28 Aligned_cols=135 Identities=13% Similarity=0.145 Sum_probs=95.7
Q ss_pred CceEEEEccCCcEEEEECC-CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 84 EPYSVEVLPGGELLILDSA-NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~-n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
..+++.+.+||+++|++.. +++|+.++++|.. +..+ +...+. ...+..|.+++++++|+++|++..
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~---l~~~-~~~~~~---------~~~~~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNMKGEV---LSKT-EFETGI---------ERPHAQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECTTSCE---EEEE-EECCSC---------SSGGGSCSCCEECTTSCEEEEETT
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeCCCCE---EEEE-eccCCC---------CcccccccCceECCCCCEEEEecC
Confidence 4557788899999999988 8999999998632 2222 110011 122556889999999999999999
Q ss_pred CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC-CCceEEecc-
Q 011333 163 NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH-FDDCAYQYG- 238 (488)
Q Consensus 163 N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~-g~~~~~~~~- 238 (488)
+++|..++ +|. +.++... ..|++++ ...+|+++|++..+++|..+++. |...-....
T Consensus 145 ~~~v~~~d~~G~~~w~~~~~------------------~~~~~~~-~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 145 TSEVREIAPNGQLLNSVKLS------------------GTPFSSA-FLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp TTEEEEECTTSCEEEEEECS------------------SCCCEEE-ECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred CCEEEEECCCCCEEEEEECC------------------CCcccee-EcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 99999999 655 3333221 2577787 67889999999999999999999 654433221
Q ss_pred ------CCCcceEEEEec
Q 011333 239 ------SSFPLGIAVLLA 250 (488)
Q Consensus 239 ------~g~P~GIav~~g 250 (488)
+..|.+++++..
T Consensus 206 ~~~~~~l~~~~~~~~~~~ 223 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQN 223 (276)
T ss_dssp GSBSCCCSEEEEEEECTT
T ss_pred CCCCccccccccceEcCC
Confidence 223667777644
No 71
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.49 E-value=2.9e-06 Score=82.96 Aligned_cols=132 Identities=11% Similarity=0.007 Sum_probs=96.5
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.|.+++++++|+++|++..+++|+.++++| ++....+. -..|.+++++++|+++|++..+
T Consensus 126 ~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G----~~~w~~~~----------------~~~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 126 QFRQINKNKKGNYLVPLFATSEVREIAPNG----QLLNSVKL----------------SGTPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp SCSCCEECTTSCEEEEETTTTEEEEECTTS----CEEEEEEC----------------SSCCCEEEECTTSCEEEECBTT
T ss_pred cccCceECCCCCEEEEecCCCEEEEECCCC----CEEEEEEC----------------CCCccceeEcCCCCEEEEeCCC
Confidence 577889999999999999999999999985 33333322 0247889999999999999999
Q ss_pred CEEEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC----------CCCeEEEEEcCC
Q 011333 164 MAIRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR----------GNRAIREIQLHF 230 (488)
Q Consensus 164 ~rIrkid-~-gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~----------gN~rIrkI~~~g 230 (488)
++|..++ + |. +..+..... ....|..|.+++ +.++|++||++. ++.++.+|+.+|
T Consensus 186 ~~v~~~d~~tG~~~w~~~~~~~-----------~~~~l~~~~~~~-~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 186 HCFVQLNLESNRIVRRVNANDI-----------EGVQLFFVAQLF-PLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp SEEEEECTTTCCEEEEEEGGGS-----------BSCCCSEEEEEE-ECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred CeEEEEeCcCCcEEEEecCCCC-----------CCccccccccce-EcCCCCEEEEeccCccccccccCCceEEEECCCC
Confidence 9999999 4 55 444432110 012477899999 788999999996 245799998888
Q ss_pred CceEEe---ccCCCcceEEE
Q 011333 231 DDCAYQ---YGSSFPLGIAV 247 (488)
Q Consensus 231 ~~~~~~---~~~g~P~GIav 247 (488)
+..-.+ ...+.+.+||.
T Consensus 254 ~~~W~~~~~~~~~~~~~~~~ 273 (276)
T 3no2_A 254 KVVWQLNDKVKFGMISTICP 273 (276)
T ss_dssp BEEEEECCTTTSCCCCEEEE
T ss_pred CEEEEecCcccccceeeeee
Confidence 755433 33456666654
No 72
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.47 E-value=1.2e-06 Score=89.37 Aligned_cols=147 Identities=11% Similarity=-0.016 Sum_probs=96.8
Q ss_pred CceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcc--ccCCCcccccccCCcceEEE---cCCCcEE
Q 011333 84 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYS--GHVDGKPREARMNHPKGLTV---DDRGNIY 157 (488)
Q Consensus 84 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~--G~~dG~a~~a~Ln~P~GIAv---D~dG~LY 157 (488)
.|.+++.|+ +|.+|+++..+++|.++++.++ ....+ ...+.. |. ...+|.||.+ |++|.||
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~---~~~~~--~~~~~s~~g~--------~~~~~sGl~~~~~D~~grL~ 80 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ---SHFNV--VIDGASSNGD--------GEQQMSGLSLLTHDNSKRLF 80 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTC---CEEEE--CCTTTCCSSC--------CSEEEEEEEESSSSSCCEEE
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCC---eEEEE--ecCCccccCC--------CcceeeEEEEeccCCCCcEE
Confidence 799999986 7889999999999999999852 22222 111211 21 1345789999 7899999
Q ss_pred E-EEC------------CCCEEEEEc-C----CCcEEEeCCccCCCCCCCCC--CcccccCCCCCeeEEECCCCeEEEEE
Q 011333 158 I-ADT------------MNMAIRKIS-D----SGVTTIAGGKWGRGGGHVDG--PSEDAKFSNDFDVVYIGSSCSLLVID 217 (488)
Q Consensus 158 V-AD~------------~N~rIrkid-~----ggVttIaGg~~g~~~g~~dG--~~~~a~f~~P~gIa~vd~~G~LYVaD 217 (488)
| +|. +.+.|.++| + +.+...+...... ++ ......+..+++|+ +|.+|++||+|
T Consensus 81 vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~-----~~~~~~~g~~~~~~nDva-vD~~GnaYVt~ 154 (334)
T 2p9w_A 81 AVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQ-----DEFEKKAGKRPFGVVQSA-QDRDGNSYVAF 154 (334)
T ss_dssp EEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHH-----HHHHHHHSSCCEEEEEEE-ECTTSCEEEEE
T ss_pred EEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccc-----ccccccccccccCCceeE-ECCCCCEEEeC
Confidence 8 662 357899999 5 4443333321000 00 00000234589999 89999999999
Q ss_pred CCC-CeEEEEEcCCCceEEe-ccC------CCcceEEEEe
Q 011333 218 RGN-RAIREIQLHFDDCAYQ-YGS------SFPLGIAVLL 249 (488)
Q Consensus 218 ~gN-~rIrkI~~~g~~~~~~-~~~------g~P~GIav~~ 249 (488)
+.. +.|++++++|...... ... ..+.||+...
T Consensus 155 s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~p 194 (334)
T 2p9w_A 155 ALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDP 194 (334)
T ss_dssp EESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEET
T ss_pred CCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeC
Confidence 999 9999999998744321 111 1366888873
No 73
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.46 E-value=2.7e-05 Score=75.28 Aligned_cols=140 Identities=16% Similarity=0.166 Sum_probs=89.3
Q ss_pred CceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEEC
Q 011333 84 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~ 161 (488)
.|.+++++++|. ||+++..++.|..++..++ ++........+.. ........|.+++++++|+ ||+++.
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTG---EVKGRLVLDDRKR------TEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTC---CEEEEEESCCCCC------CSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCC---eeEEEEecCCCcc------ccccCCCCCceEEECCCCCEEEEEec
Confidence 689999999987 9999998899999998753 3322222110000 0001123588999999986 999994
Q ss_pred -CCCEEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe-
Q 011333 162 -MNMAIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ- 236 (488)
Q Consensus 162 -~N~rIrkid-~-ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~- 236 (488)
.+++|.+++ . +.+ .++... -..|.++++.++...||+++. ++.|..+++........
T Consensus 161 ~~~~~i~~~d~~~~~~~~~~~~~-----------------~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 161 GKESVIWVVDGGNIKLKTAIQNT-----------------GKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRK 222 (353)
T ss_dssp SSSCEEEEEETTTTEEEEEECCC-----------------CTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEcCCCCceEEEecCC-----------------CCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEE
Confidence 478899999 3 333 222211 124788886555556888876 67899999876544321
Q ss_pred -c----cCCCcceEEEEec
Q 011333 237 -Y----GSSFPLGIAVLLA 250 (488)
Q Consensus 237 -~----~~g~P~GIav~~g 250 (488)
. ....+.++++...
T Consensus 223 ~~~~~~~~~~~~~~~~s~d 241 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTA 241 (353)
T ss_dssp ECCCSSSCCCEEEEEEETT
T ss_pred EcCCCCCCcccceEEECCC
Confidence 1 1224556777654
No 74
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.41 E-value=3.1e-07 Score=94.51 Aligned_cols=111 Identities=15% Similarity=0.109 Sum_probs=82.6
Q ss_pred CCCCCceEEEEccCCcEEEEEC-----------------CCCeEEEEeCCCCcccccEEEecCCCCccccCCCccccccc
Q 011333 80 KLGIEPYSVEVLPGGELLILDS-----------------ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARM 142 (488)
Q Consensus 80 ~~l~~P~GIaVd~dG~LYVaD~-----------------~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~L 142 (488)
..++.|++++++++|.+||++. ..++|+++++. .+..++.. |
T Consensus 162 ~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-----~~~~~~~~----------------l 220 (355)
T 3sre_A 162 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-----DVRVVAEG----------------F 220 (355)
T ss_dssp TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-----CCEEEEEE----------------E
T ss_pred CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC-----eEEEeecC----------------C
Confidence 3477999999999999999875 24689999873 34555443 7
Q ss_pred CCcceEEEcCCC-cEEEEECCCCEEEEEc-C--CCcEE--EeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEE
Q 011333 143 NHPKGLTVDDRG-NIYIADTMNMAIRKIS-D--SGVTT--IAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLV 215 (488)
Q Consensus 143 n~P~GIAvD~dG-~LYVAD~~N~rIrkid-~--ggVtt--IaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~-~G~LYV 215 (488)
..|+|||+++|| .|||+|+..++|++++ + +.+.. +... -..|-+++ +|. +|+|||
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~-----------------~g~PDGi~-vD~e~G~lwv 282 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF-----------------DTLVDNIS-VDPVTGDLWV 282 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC-----------------SSEEEEEE-ECTTTCCEEE
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC-----------------CCCCceEE-EeCCCCcEEE
Confidence 789999999999 6999999999999998 3 33321 1100 12588999 898 599999
Q ss_pred EE-CCCCeEEEEEcC
Q 011333 216 ID-RGNRAIREIQLH 229 (488)
Q Consensus 216 aD-~gN~rIrkI~~~ 229 (488)
+. .+..+|.++++.
T Consensus 283 a~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 283 GCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEESCHHHHHSCCTT
T ss_pred EecCCceEEEEECCC
Confidence 76 455666666654
No 75
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.36 E-value=8.1e-06 Score=79.85 Aligned_cols=121 Identities=10% Similarity=0.134 Sum_probs=81.3
Q ss_pred CCceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEE---ecCCCCccccCCCcccccccCCcceEEEcCCCc-EE
Q 011333 83 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLV---AGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IY 157 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tv---aG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LY 157 (488)
..|.++++++||. ||+++...++|..++.+... +.+..+ .....+. .....|.+|+++++|+ ||
T Consensus 187 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~~~~~~~~----------~~~~~~~~i~~spdG~~l~ 255 (347)
T 3hfq_A 187 FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT-GAFTQLGIVKTIPADY----------TAHNGAAAIRLSHDGHFLY 255 (347)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT-TEEEEEEEEESSCTTC----------CSCCEEEEEEECTTSCEEE
T ss_pred CCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC-CceEEeeeeeecCCCC----------CCCCcceeEEECCCCCEEE
Confidence 4688999999998 99999888888888765211 222222 1111111 1135689999999997 89
Q ss_pred EEECCCCEEEEEc-C--CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcC
Q 011333 158 IADTMNMAIRKIS-D--SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 158 VAD~~N~rIrkid-~--ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gN~rIrkI~~~ 229 (488)
|++..++.|..++ + +.+..+..... .-..|.+++ ++++| .|||++.+++.|..++.+
T Consensus 256 v~~~~~~~v~v~~~~~~g~~~~~~~~~~--------------~~~~~~~~~-~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 256 VSNRGYNTLAVFAVTADGHLTLIQQIST--------------EGDFPRDFD-LDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEETTTEEEEEEECGGGCEEEEEEEEC--------------SSSCCCEEE-ECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeCCCCEEEEEEECCCCcEEEeEEEec--------------CCCCcCeEE-ECCCCCEEEEEEcCCCcEEEEEEe
Confidence 9998889999888 3 23333322110 012588999 56666 599999998988888654
No 76
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.33 E-value=2.2e-05 Score=75.74 Aligned_cols=143 Identities=13% Similarity=0.212 Sum_probs=93.6
Q ss_pred CCCceEEEEccCCc-EEEEECCCCeEEEEeCCCCcc-cccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEE
Q 011333 82 GIEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLY-SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYI 158 (488)
Q Consensus 82 l~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~-g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYV 158 (488)
...|.+++++++|. ||+++..++.|+.++...+.. ..+..+.. -..|.+++++++|+ ||+
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-----------------~~~~~~~~~spdg~~l~v 237 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-----------------NNLPGTIVVSRDGSTVYV 237 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-----------------SSCCCCEEECTTSSEEEE
T ss_pred CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-----------------CCCCceEEECCCCCEEEE
Confidence 34699999999997 999999899999999875321 00222221 13588999999998 999
Q ss_pred EECCCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe
Q 011333 159 ADTMNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ 236 (488)
Q Consensus 159 AD~~N~rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~ 236 (488)
++...+.|..++ . +.+..+....... ..+. .......++++.++...|||+...++.|..+++......+.
T Consensus 238 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 238 LTESTVDVFNFNQLSGTLSFVKSFGHGL---LIDP----RPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp ECSSEEEEEEEETTTTEEEEEEEEECCC---CCCC----GGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred EEcCCCEEEEEECCCCceeeeccccccc---ccCC----CCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 998888999999 3 4443332111100 0000 11112356885444456899999999999999987666555
Q ss_pred ccCCCcceEEEE
Q 011333 237 YGSSFPLGIAVL 248 (488)
Q Consensus 237 ~~~g~P~GIav~ 248 (488)
.......++++.
T Consensus 311 ~~~~~~g~~~~~ 322 (331)
T 3u4y_A 311 AGIEANGGIAIC 322 (331)
T ss_dssp TTCCCBSCEEEC
T ss_pred ecccccCCeEEE
Confidence 444444455543
No 77
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.29 E-value=4.1e-05 Score=75.36 Aligned_cols=145 Identities=14% Similarity=0.166 Sum_probs=90.0
Q ss_pred CceEEEEccCCc-EEEEECCCCeEEEEeCCCCccc----c-cEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-E
Q 011333 84 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYS----R-PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-I 156 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g----~-i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-L 156 (488)
.|++++++|+|. ||+++...++|+.++.+... + . +... |... ......-..|++++++++|+ |
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~-~~~~~~~l~~~-~~~~--------~~~~~~~~~~~~~~~spdg~~l 225 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNA-NADNKEKFLTK-GTPE--------AFKVAPGSGPRHLIFNSDGKFA 225 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTC-CTTTCCCCEEE-EEEE--------EEECCTTCCEEEEEECTTSSEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCC-Ccccccceeec-cccc--------ceecCCCCCCeEEEEcCCCCEE
Confidence 358899999997 99999988888888655311 1 1 1111 0000 00000124588999999996 9
Q ss_pred EEEECCCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECC-CCeEEEEEcC---
Q 011333 157 YIADTMNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRG-NRAIREIQLH--- 229 (488)
Q Consensus 157 YVAD~~N~rIrkid--~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~g-N~rIrkI~~~--- 229 (488)
|+++..++.|+.++ .+.+..+...... ...+..|.+|+ ++++| .||+++.+ .+.|..++.+
T Consensus 226 ~v~~~~~~~v~v~~~~~g~~~~~~~~~~~-----------~~~~~~~~~i~-~spdg~~l~v~~~~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 226 YLINEIGGTVIAFRYADGMLDEIQTVAAD-----------TVNAQGSGDIH-LSPDGKYLYASNRLKADGVAIFKVDETN 293 (361)
T ss_dssp EEEETTTCEEEEEEEETTEEEEEEEEESC-----------SSCCCCEEEEE-ECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred EEEcCCCCeEEEEEecCCceEEeEEEecC-----------CCCCCCcccEE-ECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence 99998889999988 4444333211100 11245678999 55666 58999998 8889888875
Q ss_pred CCceE--EeccCCCcceEEEEec
Q 011333 230 FDDCA--YQYGSSFPLGIAVLLA 250 (488)
Q Consensus 230 g~~~~--~~~~~g~P~GIav~~g 250 (488)
+.... .......|.++++...
T Consensus 294 g~~~~~~~~~~g~~~~~~~~spd 316 (361)
T 3scy_A 294 GTLTKVGYQLTGIHPRNFIITPN 316 (361)
T ss_dssp CCEEEEEEEECSSCCCEEEECTT
T ss_pred CcEEEeeEecCCCCCceEEECCC
Confidence 22111 1222346888888743
No 78
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.26 E-value=3.4e-05 Score=75.96 Aligned_cols=119 Identities=13% Similarity=0.182 Sum_probs=81.1
Q ss_pred CCCceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEE
Q 011333 82 GIEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 159 (488)
Q Consensus 82 l~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVA 159 (488)
...|.++++++||. ||+++..++.|..++.++ +.+..+.... ... ..+..|.+|+++++|+ ||++
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~---g~~~~~~~~~-~~~---------~~~~~~~~i~~spdg~~l~v~ 276 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD---GMLDEIQTVA-ADT---------VNAQGSGDIHLSPDGKYLYAS 276 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEET---TEEEEEEEEE-SCS---------SCCCCEEEEEECTTSSEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC---CceEEeEEEe-cCC---------CCCCCcccEEECCCCCEEEEE
Confidence 34789999999997 999998888999998764 2332221110 000 1245688999999997 8899
Q ss_pred ECC-CCEEEEEc-C---CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcC
Q 011333 160 DTM-NMAIRKIS-D---SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 160 D~~-N~rIrkid-~---ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gN~rIrkI~~~ 229 (488)
+.. .+.|..++ + +.+..+.....+ ..|.+++ ++++| .||+++..++.|..+..+
T Consensus 277 ~~~~~~~i~v~~~~~~~g~~~~~~~~~~g---------------~~~~~~~-~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 277 NRLKADGVAIFKVDETNGTLTKVGYQLTG---------------IHPRNFI-ITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp ECSSSCEEEEEEECTTTCCEEEEEEEECS---------------SCCCEEE-ECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCEEEEEEEcCCCCcEEEeeEecCC---------------CCCceEE-ECCCCCEEEEEECCCCCEEEEEEE
Confidence 988 78888866 2 334333221101 2688999 56666 599999888888885554
No 79
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.24 E-value=3e-06 Score=86.08 Aligned_cols=128 Identities=14% Similarity=0.078 Sum_probs=79.0
Q ss_pred CceEEEEcc----CCcEEEEECC-------CCeEEEEeCCCC--cccccEEEecCCCCccccCCCcccccccCCcceEEE
Q 011333 84 EPYSVEVLP----GGELLILDSA-------NSNLYRISSSLS--LYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV 150 (488)
Q Consensus 84 ~P~GIaVd~----dG~LYVaD~~-------n~rI~kid~~g~--~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAv 150 (488)
.|.||+++| +|.|||++.. .++|.+++.+.. ......+++..... .....+.|.+|++
T Consensus 67 g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~---------~~~~~h~~~~l~~ 137 (353)
T 2g8s_A 67 GLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPK---------LSTGNHFGGRLVF 137 (353)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSC---------CBSSSCCCCCEEE
T ss_pred CceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCC---------CCCCcccCccEEE
Confidence 678999998 5899999864 468999876532 11222333321100 0112456899999
Q ss_pred cCCCcEEEEECC-------------CCEEEEEc-CCCcEEEeCCccCCCCCCCCC---CcccccCCCCCeeEEECC-CCe
Q 011333 151 DDRGNIYIADTM-------------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDG---PSEDAKFSNDFDVVYIGS-SCS 212 (488)
Q Consensus 151 D~dG~LYVAD~~-------------N~rIrkid-~ggVttIaGg~~g~~~g~~dG---~~~~a~f~~P~gIa~vd~-~G~ 212 (488)
+++|.|||+... ..+|.+|+ ++.+. .+.+ +-...+ ......+.+|++++ +++ +|.
T Consensus 138 ~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p--~~np----f~~~~~~~~~i~a~G~rnp~gl~-~d~~~g~ 210 (353)
T 2g8s_A 138 DGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP--DDNP----FIKESGVRAEIWSYGIRNPQGMA-MNPWSNA 210 (353)
T ss_dssp CSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC--TTCT----TTTSTTSCTTEEEECCSEEEEEE-EETTTTE
T ss_pred CCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC--CCCC----CcCCCCCCccEEEEcCcCccceE-EECCCCC
Confidence 999999999633 35899998 54431 1110 000011 11123467899999 566 899
Q ss_pred EEEEECCCC---eEEEEE
Q 011333 213 LLVIDRGNR---AIREIQ 227 (488)
Q Consensus 213 LYVaD~gN~---rIrkI~ 227 (488)
||++|.+.+ .|.+|.
T Consensus 211 l~~~d~g~~~~dei~~i~ 228 (353)
T 2g8s_A 211 LWLNEHGPRGGDEINIPQ 228 (353)
T ss_dssp EEEEEECSBSCEEEECCC
T ss_pred EEEEecCCCCCcEEeEec
Confidence 999998754 555554
No 80
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.22 E-value=1.4e-05 Score=81.87 Aligned_cols=129 Identities=10% Similarity=0.107 Sum_probs=81.5
Q ss_pred CCCceEEEEcc----CCcEEEEEC--CCCeEEEEeCCCC-----cccccEEEecCCCCccccCCCcccccccCCcceEEE
Q 011333 82 GIEPYSVEVLP----GGELLILDS--ANSNLYRISSSLS-----LYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV 150 (488)
Q Consensus 82 l~~P~GIaVd~----dG~LYVaD~--~n~rI~kid~~g~-----~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAv 150 (488)
...|.||+++| +|.|||+.+ ..++|.|+..++. ......+++-.... ...+....|++
T Consensus 79 ~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~-----------~~~H~g~~l~f 147 (347)
T 3das_A 79 EGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK-----------GVIHNGGRIAF 147 (347)
T ss_dssp TBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC-----------CSSCCCCCEEE
T ss_pred CCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC-----------CCCccCccccC
Confidence 34789999998 588999753 4579999987641 22233333321100 11345778999
Q ss_pred cCCCcEEEEEC-------------CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEE
Q 011333 151 DDRGNIYIADT-------------MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVI 216 (488)
Q Consensus 151 D~dG~LYVAD~-------------~N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVa 216 (488)
+++|.|||+-. ...+|.+|+ ++.+. .+.. +.+...-..-+.+|.+|+ ++++|.||++
T Consensus 148 gpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip--~~nP------f~~~~i~a~G~RNp~Gla-~dp~G~L~~~ 218 (347)
T 3das_A 148 GPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA--PGNP------FPGSPVYSYGHRNVQGLA-WDDKQRLFAS 218 (347)
T ss_dssp CTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC--TTCS------STTCCEEEBCCSBCCEEE-ECTTCCEEEE
T ss_pred CCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc--CCCC------CCCCeEEeeCCCCcceEE-ECCCCCEEEE
Confidence 99999999942 246888888 55431 0000 001111222377899999 6779999999
Q ss_pred ECCC---CeEEEEEcCC
Q 011333 217 DRGN---RAIREIQLHF 230 (488)
Q Consensus 217 D~gN---~rIrkI~~~g 230 (488)
|.+. ..|..|...+
T Consensus 219 d~g~~~~deln~i~~G~ 235 (347)
T 3das_A 219 EFGQDTWDELNAIKPGD 235 (347)
T ss_dssp ECCSSSCEEEEEECTTC
T ss_pred ecCCCCCceeeEEcCCC
Confidence 9876 3577775443
No 81
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.15 E-value=1.4e-05 Score=86.87 Aligned_cols=122 Identities=18% Similarity=0.169 Sum_probs=81.7
Q ss_pred CCCCCceEEEEcc-CCcEEEEECCC---------------------CeEEEEeCCCCc------ccccEEEecCCCCc--
Q 011333 80 KLGIEPYSVEVLP-GGELLILDSAN---------------------SNLYRISSSLSL------YSRPKLVAGSAEGY-- 129 (488)
Q Consensus 80 ~~l~~P~GIaVd~-dG~LYVaD~~n---------------------~rI~kid~~g~~------~g~i~tvaG~~~G~-- 129 (488)
..+..|.+|+++| +|.||++=++| ++|+++...++. ...+.+++|.+...
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 3456899999998 89999985432 789999765321 01233444443111
Q ss_pred ---cccCCCcccccccCCcceEEEcCCCcEEE-EECC-----------CCEEEEEc--CCCcEEEeCCccCCCCCCCCCC
Q 011333 130 ---SGHVDGKPREARMNHPKGLTVDDRGNIYI-ADTM-----------NMAIRKIS--DSGVTTIAGGKWGRGGGHVDGP 192 (488)
Q Consensus 130 ---~G~~dG~a~~a~Ln~P~GIAvD~dG~LYV-AD~~-----------N~rIrkid--~ggVttIaGg~~g~~~g~~dG~ 192 (488)
.|. .+......|+.|.+|+||++|+||| +|.. |+.|..++ .+.+..++.+..
T Consensus 461 ~~~~g~-~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~---------- 529 (592)
T 4a9v_A 461 TPKGGS-SNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI---------- 529 (592)
T ss_dssp SGGGCC-TTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT----------
T ss_pred ccccCc-cCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC----------
Confidence 110 1122345799999999999999999 8863 56889988 355777764321
Q ss_pred cccccCCCCCeeEEECCCCeEEEEE
Q 011333 193 SEDAKFSNDFDVVYIGSSCSLLVID 217 (488)
Q Consensus 193 ~~~a~f~~P~gIa~vd~~G~LYVaD 217 (488)
+..|+|+++.++...|||+-
T Consensus 530 -----~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 530 -----GCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp -----TCEEEEEEECTTSSEEEEEE
T ss_pred -----CccccCCEECCCCCEEEEEE
Confidence 34789999777667888874
No 82
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.04 E-value=0.00011 Score=72.59 Aligned_cols=132 Identities=14% Similarity=0.002 Sum_probs=87.8
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.+.|++++ ++.||+++..+++|.++|..+.. .+.++. . + ...+.||+.| .+.+|++| +.
T Consensus 67 fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~--v~~~i~-~--g-------------~~~g~glt~D-g~~l~vs~-gs 125 (266)
T 2iwa_A 67 FGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLS--NIKNFT-H--Q-------------MKDGWGLATD-GKILYGSD-GT 125 (266)
T ss_dssp CEEEEEEE-TTEEEEEETTCSEEEEEETTTTE--EEEEEE-C--C-------------SSSCCEEEEC-SSSEEEEC-SS
T ss_pred ceEEEEEe-CCEEEEEEecCCEEEEEECCCCc--EEEEEE-C--C-------------CCCeEEEEEC-CCEEEEEC-CC
Confidence 45677886 46899999999999999987521 222221 0 1 0124556665 35799999 68
Q ss_pred CEEEEEcCC--C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE-ec--
Q 011333 164 MAIRKISDS--G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY-QY-- 237 (488)
Q Consensus 164 ~rIrkid~g--g-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~-~~-- 237 (488)
++|..+|.. . +.+|.-+..+. .+..|+.+.++ +|.||++....+.|.+||+....+.. ..
T Consensus 126 ~~l~viD~~t~~v~~~I~Vg~~~~------------p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 126 SILYEIDPHTFKLIKKHNVKYNGH------------RVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp SEEEEECTTTCCEEEEEECEETTE------------ECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred CeEEEEECCCCcEEEEEEECCCCc------------ccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 899999943 3 44554322111 24568899866 58999999999999999997654432 21
Q ss_pred c------------CCCcceEEEEec
Q 011333 238 G------------SSFPLGIAVLLA 250 (488)
Q Consensus 238 ~------------~g~P~GIav~~g 250 (488)
+ ...|.|||++.+
T Consensus 192 g~~~~~~~~~~~~~~v~nGIa~~~~ 216 (266)
T 2iwa_A 192 NLRKKLIDEGFRDIDVLNGIAWDQE 216 (266)
T ss_dssp HHHHHHHHTTCTTCCCEEEEEEETT
T ss_pred CcccccccccccccCceEEEEEcCC
Confidence 1 135789999855
No 83
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.02 E-value=7.8e-05 Score=71.81 Aligned_cols=119 Identities=13% Similarity=0.199 Sum_probs=81.7
Q ss_pred CCCceEEEEccCCc-EEEEECCCCe-EEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEE
Q 011333 82 GIEPYSVEVLPGGE-LLILDSANSN-LYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYI 158 (488)
Q Consensus 82 l~~P~GIaVd~dG~-LYVaD~~n~r-I~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYV 158 (488)
...|.+++++++|+ ||+++...+. |..++.+.. +.+....... - ..-..|.+++++++|+ ||+
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~--g~~~~~~~~~-~-----------~~~~~~~~~~~spdg~~l~v 192 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD--GVLFDTGQEF-I-----------SGGTRPFNITFTPDGNFAFV 192 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT--CCEEEEEEEE-E-----------CSSSSEEEEEECTTSSEEEE
T ss_pred CCCccceEECCCCCEEEEEecCCCceEEEEEECCC--CcEeecCCcc-c-----------cCCCCccceEECCCCCEEEE
Confidence 34789999999996 9999987677 776665421 2221111100 0 0023489999999997 999
Q ss_pred EECCCCEEEEEc--CCCc----EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEEEcCCC
Q 011333 159 ADTMNMAIRKIS--DSGV----TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 159 AD~~N~rIrkid--~ggV----ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaD~gN~rIrkI~~~g~ 231 (488)
++..++.|+.++ .+.+ .++..+ ..|.+++ ++++|+ ||+++.+.+.|..+++...
T Consensus 193 ~~~~~~~v~v~d~~~~~~~~~~~~~~~~------------------~~~~~~~-~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 193 ANLIGNSIGILETQNPENITLLNAVGTN------------------NLPGTIV-VSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp EETTTTEEEEEECSSTTSCEEEEEEECS------------------SCCCCEE-ECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred EeCCCCeEEEEECCCCcccceeeeccCC------------------CCCceEE-ECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 999999999999 3443 222211 3578898 566665 9999988889999998754
Q ss_pred ce
Q 011333 232 DC 233 (488)
Q Consensus 232 ~~ 233 (488)
..
T Consensus 254 ~~ 255 (331)
T 3u4y_A 254 TL 255 (331)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 84
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.96 E-value=0.00037 Score=66.63 Aligned_cols=141 Identities=11% Similarity=0.051 Sum_probs=88.4
Q ss_pred CCceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccE---EEecCCCCccccCCCcccccccCCcceEEEcCCCc-EE
Q 011333 83 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPK---LVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IY 157 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~---tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LY 157 (488)
..|.+++++++|. ||+++..++.|..++.+... +.+. .+.....+. .....|.+|+++++|. ||
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~-g~~~~~~~~~~~~~~~----------~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH-GNIECVQTLDMMPENF----------SDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT-SCCEEEEEEECSCTTC----------CSCCCEEEEEECTTSSEEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC-CcEEEEeeccccCccc----------cccCCccceEECCCCCEEE
Confidence 4788999999997 88999888999999985211 2222 221111111 1145678999999995 88
Q ss_pred EEECCCCEEEEEc-C--CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcC--C
Q 011333 158 IADTMNMAIRKIS-D--SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLH--F 230 (488)
Q Consensus 158 VAD~~N~rIrkid-~--gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gN~rIrkI~~~--g 230 (488)
+++..++.|+.++ + ++ ...+..... -..|.+++ ++++| .||+++...+.|..++.+ .
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~~~~~~~---------------~~~~~~~~-~s~dg~~l~~~~~~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSKEGFQPT---------------ETQPRGFN-VDHSGKYLIAAGQKSHHISVYEIVGEQ 310 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEEEEEEEC---------------SSSCCCEE-ECTTSSEEEEECTTTCEEEEEEEETTT
T ss_pred EEecCCCEEEEEEEcCCCCceEEeeeecC---------------CCccceEE-ECCCCCEEEEecCCCCeEEEEEEcCCC
Confidence 8998889999988 3 33 333221110 01378898 45555 589998878888887554 2
Q ss_pred CceE---EeccCCCcceEEEEec
Q 011333 231 DDCA---YQYGSSFPLGIAVLLA 250 (488)
Q Consensus 231 ~~~~---~~~~~g~P~GIav~~g 250 (488)
.... .......|.+|++...
T Consensus 311 g~~~~~~~~~~g~~p~~i~~~~~ 333 (343)
T 1ri6_A 311 GLLHEKGRYAVGQGPMWVVVNAH 333 (343)
T ss_dssp TEEEEEEEEECSSSCCEEEEEEE
T ss_pred ceeeEccccccCCCCeeEEEEcc
Confidence 2111 1222346777777643
No 85
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.95 E-value=0.0001 Score=72.79 Aligned_cols=110 Identities=12% Similarity=0.074 Sum_probs=77.2
Q ss_pred CceEEEEccCCcEEEEEC--CCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 84 EPYSVEVLPGGELLILDS--ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~--~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
.|+||+++++|.||++.. +.+.|+++|..++ ++....--. . -..+.||+++ .+.||+++.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg---~v~~~i~l~-------~-------~~fgeGi~~~-g~~lyv~t~ 83 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTG---KVENIHKMD-------D-------SYFGEGLTLL-NEKLYQVVW 83 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTC---CEEEEEECC-------T-------TCCEEEEEEE-TTEEEEEET
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCC---CEEEEEecC-------C-------CcceEEEEEe-CCEEEEEEe
Confidence 589999999899999974 4789999999863 322221110 0 1234578887 458999999
Q ss_pred CCCEEEEEcCCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 162 MNMAIRKISDSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 162 ~N~rIrkid~gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
.+++|.+||... +.+|.-+ .+ .+++|+ .+.+.|||+| +.+.|..|++...
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g-~~----------------~g~glt--~Dg~~l~vs~-gs~~l~viD~~t~ 136 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQ-MK----------------DGWGLA--TDGKILYGSD-GTSILYEIDPHTF 136 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECC-SS----------------SCCEEE--ECSSSEEEEC-SSSEEEEECTTTC
T ss_pred cCCEEEEEECCCCcEEEEEECC-CC----------------CeEEEE--ECCCEEEEEC-CCCeEEEEECCCC
Confidence 999999999433 3444322 00 245666 3467899999 6889999998763
No 86
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.87 E-value=0.00037 Score=66.60 Aligned_cols=114 Identities=10% Similarity=0.003 Sum_probs=77.7
Q ss_pred CceEEEEccCCc-EEEEECCCCeEEEEeCC--CCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEE
Q 011333 84 EPYSVEVLPGGE-LLILDSANSNLYRISSS--LSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 159 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~~--g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVA 159 (488)
.|.+++++++|. ||+++..++.|..++.+ + +....+.... . -..|.+|+++++|+ ||++
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~-~-------------~~~~~~~~~s~dg~~l~~~ 101 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD---GALTFAAESA-L-------------PGSLTHISTDHQGQFVFVG 101 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTT---CCEEEEEEEE-C-------------SSCCSEEEECTTSSEEEEE
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCC---Cceeeccccc-c-------------CCCCcEEEEcCCCCEEEEE
Confidence 688999999998 89998877888887665 3 2222221110 0 12589999999997 8899
Q ss_pred ECCCCEEEEEcC--CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCC
Q 011333 160 DTMNMAIRKISD--SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 160 D~~N~rIrkid~--ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gN~rIrkI~~~g 230 (488)
+...+.|..++- +.. ..+.... ....|.++++ +++| .||+++...+.|+.+++..
T Consensus 102 ~~~~~~i~~~d~~~~~~~~~~~~~~---------------~~~~~~~~~~-s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 102 SYNAGNVSVTRLEDGLPVGVVDVVE---------------GLDGCHSANI-SPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp ETTTTEEEEEEEETTEEEEEEEEEC---------------CCTTBCCCEE-CTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ecCCCeEEEEECCCCcccccccccc---------------CCCCceEEEE-CCCCCEEEEecCCCCEEEEEEecC
Confidence 988888888872 221 1111100 0124788884 5555 6999998889999999875
No 87
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.85 E-value=0.00041 Score=68.71 Aligned_cols=130 Identities=15% Similarity=0.019 Sum_probs=87.0
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
..||+++ ++.||+++..+++|+++|.++.. .+.++.-. ..+.|++.| .+.||++| +.+
T Consensus 98 geGit~~-g~~Ly~ltw~~~~v~V~D~~Tl~--~~~ti~~~-----------------~eGwGLt~D-g~~L~vSd-Gs~ 155 (268)
T 3nok_A 98 AEGLASD-GERLYQLTWTEGLLFTWSGMPPQ--RERTTRYS-----------------GEGWGLCYW-NGKLVRSD-GGT 155 (268)
T ss_dssp EEEEEEC-SSCEEEEESSSCEEEEEETTTTE--EEEEEECS-----------------SCCCCEEEE-TTEEEEEC-SSS
T ss_pred eeEEEEe-CCEEEEEEccCCEEEEEECCcCc--EEEEEeCC-----------------CceeEEecC-CCEEEEEC-CCC
Confidence 3567775 45899999999999999987521 22233211 125678877 45899999 589
Q ss_pred EEEEEcCC--C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE-ec---
Q 011333 165 AIRKISDS--G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY-QY--- 237 (488)
Q Consensus 165 rIrkid~g--g-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~-~~--- 237 (488)
+|+.+|.. . +.+|.-+..+. .+..++.+.++ +|.||+..+..+.|.+||+....+.. ..
T Consensus 156 ~l~~iDp~T~~v~~~I~V~~~g~------------~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 156 MLTFHEPDGFALVGAVQVKLRGQ------------PVELINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp EEEEECTTTCCEEEEEECEETTE------------ECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHH
T ss_pred EEEEEcCCCCeEEEEEEeCCCCc------------ccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCC
Confidence 99999933 3 33443221111 24456778865 68999999999999999997654432 11
Q ss_pred -----------cCCCcceEEEEec
Q 011333 238 -----------GSSFPLGIAVLLA 250 (488)
Q Consensus 238 -----------~~g~P~GIav~~g 250 (488)
....|.|||.+..
T Consensus 222 L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 222 LTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp HHHHHTTTCCCTTCCEEEEEECTT
T ss_pred CcccccccccCcCCceEEEEEcCC
Confidence 1136789998864
No 88
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.83 E-value=4.5e-05 Score=80.46 Aligned_cols=121 Identities=12% Similarity=0.092 Sum_probs=73.7
Q ss_pred CceEEEEcc----CCcEEEEECC------------CCeEEEEeCCCC--cccccEEEecCCCCccccCCCcccccccCCc
Q 011333 84 EPYSVEVLP----GGELLILDSA------------NSNLYRISSSLS--LYSRPKLVAGSAEGYSGHVDGKPREARMNHP 145 (488)
Q Consensus 84 ~P~GIaVd~----dG~LYVaD~~------------n~rI~kid~~g~--~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P 145 (488)
.+.||+++| +|.|||+++. .++|.|++.+.. ......+++..... ...+.+
T Consensus 78 Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-----------~~~H~~ 146 (454)
T 1cru_A 78 GLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-----------SKDHQS 146 (454)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-----------CSSCCE
T ss_pred ceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-----------CCCCCC
Confidence 567999998 7899999864 468999986431 11222333321100 114568
Q ss_pred ceEEEcCCCcEEEEECC--------------------------------CCEEEEEc-CCCcEEEeCCccCCCCCCCCCC
Q 011333 146 KGLTVDDRGNIYIADTM--------------------------------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGP 192 (488)
Q Consensus 146 ~GIAvD~dG~LYVAD~~--------------------------------N~rIrkid-~ggVttIaGg~~g~~~g~~dG~ 192 (488)
.+|++++||.|||+-.. ..+|.+|+ ++.+. .+.... +.....
T Consensus 147 ~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip--~~Npf~---~~~~~e 221 (454)
T 1cru_A 147 GRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIP--KDNPSF---NGVVSH 221 (454)
T ss_dssp EEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCC--TTCCEE---TTEECS
T ss_pred CeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCC--CCCCCC---CCCcce
Confidence 99999999999998432 35788888 54421 000000 000000
Q ss_pred cccccCCCCCeeEEECCCCeEEEEECCCC
Q 011333 193 SEDAKFSNDFDVVYIGSSCSLLVIDRGNR 221 (488)
Q Consensus 193 ~~~a~f~~P~gIa~vd~~G~LYVaD~gN~ 221 (488)
.-..-+.+|++++ ++++|.||++|.+.+
T Consensus 222 i~a~G~RNp~gla-~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 222 IYTLGHRNPQGLA-FTPNGKLLQSEQGPN 249 (454)
T ss_dssp EEEBCCSEEEEEE-ECTTSCEEEEEECSS
T ss_pred EEEECCCCcceEE-ECCCCCEEEEecCCC
Confidence 1122367899999 677899999997654
No 89
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.79 E-value=0.00076 Score=71.49 Aligned_cols=162 Identities=13% Similarity=0.125 Sum_probs=98.5
Q ss_pred CCceeEEeecCCCCCCCceEEEEccCCc--EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCc
Q 011333 68 SGYTVETVFDGSKLGIEPYSVEVLPGGE--LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHP 145 (488)
Q Consensus 68 dG~~~~~~~~G~~~l~~P~GIaVd~dG~--LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P 145 (488)
.|+.++.+..+ |..|++|++.+||. |||++. .++|++++.++... ...+++-..-. ..|. ...-...+
T Consensus 2 ~gf~v~~va~g---L~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~--~~~~~~~~~~~---~~g~-~~~~e~Gl 71 (463)
T 2wg3_C 2 NCFCIQEVVSG---LRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIF--KEPYLDIHKLV---QSGI-KGGDERGL 71 (463)
T ss_dssp CCEEEEEEEEE---ESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBC--SSCSEECTTTB---CCCC-SSSCCCSE
T ss_pred CceEEEEeccC---CCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCee--eeeecCCccee---ccCc-cccCCCcc
Confidence 35556665553 56999999999985 999997 47999998765311 11122211000 0000 00013456
Q ss_pred ceEEEcCC----CcEEEEECCC------------CEEEEEc-C-C--------CcEEEeCCccCCCCCCCCCCcccccCC
Q 011333 146 KGLTVDDR----GNIYIADTMN------------MAIRKIS-D-S--------GVTTIAGGKWGRGGGHVDGPSEDAKFS 199 (488)
Q Consensus 146 ~GIAvD~d----G~LYVAD~~N------------~rIrkid-~-g--------gVttIaGg~~g~~~g~~dG~~~~a~f~ 199 (488)
.|||++++ |.|||+-+.. .+|.++. . + ...+|...... ..-.
T Consensus 72 lgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~------------~~~H 139 (463)
T 2wg3_C 72 LSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAEL------------HRKH 139 (463)
T ss_dssp EEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEES------------SSSS
T ss_pred eeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCC------------CCcc
Confidence 79999985 8899985421 3777766 2 1 12333321110 0123
Q ss_pred CCCeeEEECCCCeEEEEE--CC---------------CCeEEEEEcCCC---------------------ceEEeccCCC
Q 011333 200 NDFDVVYIGSSCSLLVID--RG---------------NRAIREIQLHFD---------------------DCAYQYGSSF 241 (488)
Q Consensus 200 ~P~gIa~vd~~G~LYVaD--~g---------------N~rIrkI~~~g~---------------------~~~~~~~~g~ 241 (488)
.-..|+ ++++|.|||+- .+ .+.|.+|++++. ...+..+.--
T Consensus 140 ~g~~l~-fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN 218 (463)
T 2wg3_C 140 LGGQLL-FGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD 218 (463)
T ss_dssp CEEEEE-ECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS
T ss_pred cCCcEe-ECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC
Confidence 345677 78999999983 32 357999999983 2345667778
Q ss_pred cceEEEEecCC
Q 011333 242 PLGIAVLLAAG 252 (488)
Q Consensus 242 P~GIav~~g~g 252 (488)
|.|++++...+
T Consensus 219 p~gla~dp~tg 229 (463)
T 2wg3_C 219 PGRCAVDRHPT 229 (463)
T ss_dssp CCBEEEESSCS
T ss_pred cceEEECCCCC
Confidence 99999997643
No 90
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.78 E-value=0.00078 Score=66.49 Aligned_cols=130 Identities=12% Similarity=0.017 Sum_probs=86.4
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
..||+++ ++.||+++..++++.++|+++.. .+.++.-. ..+.|++.| .+.||++|. .+
T Consensus 89 geGit~~-g~~ly~ltw~~~~v~v~D~~t~~--~~~ti~~~-----------------~eG~glt~d-g~~L~~SdG-s~ 146 (262)
T 3nol_A 89 GEGISDW-KDKIVGLTWKNGLGFVWNIRNLR--QVRSFNYD-----------------GEGWGLTHN-DQYLIMSDG-TP 146 (262)
T ss_dssp EEEEEEE-TTEEEEEESSSSEEEEEETTTCC--EEEEEECS-----------------SCCCCEEEC-SSCEEECCS-SS
T ss_pred eeEEEEe-CCEEEEEEeeCCEEEEEECccCc--EEEEEECC-----------------CCceEEecC-CCEEEEECC-CC
Confidence 3567775 46899999999999999997522 22333211 135678876 468999995 89
Q ss_pred EEEEEcCC--C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE-ecc--
Q 011333 165 AIRKISDS--G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY-QYG-- 238 (488)
Q Consensus 165 rIrkid~g--g-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~-~~~-- 238 (488)
+|.++|.. . +.+|.-+..+ ..+..++.+.++ +|.||+.....+.|.+||+....+.. ...
T Consensus 147 ~i~~iDp~T~~v~~~I~V~~~g------------~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 147 VLRFLDPESLTPVRTITVTAHG------------EELPELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp EEEEECTTTCSEEEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECTT
T ss_pred eEEEEcCCCCeEEEEEEeccCC------------ccccccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECCc
Confidence 99999943 3 3444322111 124456678765 68999999999999999997654432 111
Q ss_pred -----------CCCcceEEEEec
Q 011333 239 -----------SSFPLGIAVLLA 250 (488)
Q Consensus 239 -----------~g~P~GIav~~g 250 (488)
...|.|||.+..
T Consensus 213 L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 213 ILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp GGGGSCSCCSSCCCEEEEEEETT
T ss_pred CccccccccCcCCceEEEEEcCC
Confidence 136788998864
No 91
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.78 E-value=0.00092 Score=65.25 Aligned_cols=130 Identities=18% Similarity=0.119 Sum_probs=86.2
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
..|++++ ++.||+++..+++|+++|.++. ..+.++.-. ..+.||+.| .+.||++|. .+
T Consensus 67 geGi~~~-~~~ly~ltw~~~~v~v~D~~tl--~~~~ti~~~-----------------~~Gwglt~d-g~~L~vSdg-s~ 124 (243)
T 3mbr_X 67 GAGIVAW-RDRLIQLTWRNHEGFVYDLATL--TPRARFRYP-----------------GEGWALTSD-DSHLYMSDG-TA 124 (243)
T ss_dssp EEEEEEE-TTEEEEEESSSSEEEEEETTTT--EEEEEEECS-----------------SCCCEEEEC-SSCEEEECS-SS
T ss_pred eeEEEEe-CCEEEEEEeeCCEEEEEECCcC--cEEEEEeCC-----------------CCceEEeeC-CCEEEEECC-CC
Confidence 4567775 5789999999999999998752 122333211 135788876 468999995 89
Q ss_pred EEEEEcCCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE-ec---
Q 011333 165 AIRKISDSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY-QY--- 237 (488)
Q Consensus 165 rIrkid~gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~-~~--- 237 (488)
+|..+|... +.+|.-+..+. .+...+.+.++ +|.||+..+..+.|.+||+....+.. ..
T Consensus 125 ~l~~iDp~t~~~~~~I~V~~~g~------------~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~ 190 (243)
T 3mbr_X 125 VIRKLDPDTLQQVGSIKVTAGGR------------PLDNLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQA 190 (243)
T ss_dssp EEEEECTTTCCEEEEEECEETTE------------ECCCEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGG
T ss_pred eEEEEeCCCCeEEEEEEEccCCc------------ccccceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCc
Confidence 999999433 34443221111 23455677754 68999999999999999998654432 11
Q ss_pred -----------cCCCcceEEEEec
Q 011333 238 -----------GSSFPLGIAVLLA 250 (488)
Q Consensus 238 -----------~~g~P~GIav~~g 250 (488)
....|.|||.+..
T Consensus 191 l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 191 LVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp GSTTTTSCCCTTSSCEEEEEEETT
T ss_pred CccccccccCCcCCceEEEEEcCC
Confidence 1136788888864
No 92
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.77 E-value=0.0011 Score=65.34 Aligned_cols=128 Identities=20% Similarity=0.278 Sum_probs=88.1
Q ss_pred CceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEEC
Q 011333 84 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~ 161 (488)
.+.+++++++|. ||++....+.|+.++..++ ........ -..+.+++++++|+ ||++..
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~---~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN---TVAGTVKT----------------GKSPLGLALSPDGKKLYVTNN 135 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEEC----------------SSSEEEEEECTTSSEEEEEET
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCC---eEEEEEeC----------------CCCcceEEECCCCCEEEEEeC
Confidence 788999999887 8889888899999998863 32222221 12478999999997 779998
Q ss_pred CCCEEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEEe-c
Q 011333 162 MNMAIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ-Y 237 (488)
Q Consensus 162 ~N~rIrkid-~-ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~~-~ 237 (488)
.++.|+.++ . +.+ .++..+ ..|.++++.+....||++...++.|+.+++....+... .
T Consensus 136 ~~~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 197 (391)
T 1l0q_A 136 GDKTVSVINTVTKAVINTVSVG------------------RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK 197 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECC------------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCcEEEEEecC------------------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 899999999 3 333 333221 14678884444446889998899999999886554432 2
Q ss_pred cCCCcceEEEE
Q 011333 238 GSSFPLGIAVL 248 (488)
Q Consensus 238 ~~g~P~GIav~ 248 (488)
....+.++++.
T Consensus 198 ~~~~~~~~~~~ 208 (391)
T 1l0q_A 198 VEAAPSGIAVN 208 (391)
T ss_dssp CSSEEEEEEEC
T ss_pred cCCCccceEEC
Confidence 22345555554
No 93
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.76 E-value=0.00051 Score=67.36 Aligned_cols=125 Identities=8% Similarity=0.150 Sum_probs=81.0
Q ss_pred eEEEEccCC-cEEEEECC-CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEEECC
Q 011333 86 YSVEVLPGG-ELLILDSA-NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADTM 162 (488)
Q Consensus 86 ~GIaVd~dG-~LYVaD~~-n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVAD~~ 162 (488)
.|||+++++ .||++.-. ...|+.++.-... ..+..+ .... .. ....+..+.+|++|+ .|.+||....
T Consensus 124 EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~-~~l~i~-~~~~-~~-------~~~~~~d~S~l~~dp~tg~lliLS~~ 193 (255)
T 3qqz_A 124 EGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSS-NELHIS-KDKA-LQ-------RQFTLDDVSGAEFNQQKNTLLVLSHE 193 (255)
T ss_dssp EEEEEETTTTEEEEEEESSSEEEEEEESTTCS-SCCEEE-ECHH-HH-------HTCCSSCCCEEEEETTTTEEEEEETT
T ss_pred ceEEEeCCCCEEEEEECcCCceEEEEcccccC-Cceeee-cchh-hc-------cccccCCceeEEEcCCCCeEEEEECC
Confidence 899999976 69988644 3488888721000 112222 1100 00 012256799999998 6789999999
Q ss_pred CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 163 NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 163 N~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
+++|..+| +|.+........+. ......+..|.||| +|++|+|||+.-. +.+++|...
T Consensus 194 s~~L~~~d~~g~~~~~~~L~~g~-------~~l~~~~~qpEGia-~d~~G~lyIvsE~-n~~y~f~~~ 252 (255)
T 3qqz_A 194 SRALQEVTLVGEVIGEMSLTKGS-------RGLSHNIKQAEGVA-MDASGNIYIVSEP-NRFYRFTPQ 252 (255)
T ss_dssp TTEEEEECTTCCEEEEEECSTTG-------GGCSSCCCSEEEEE-ECTTCCEEEEETT-TEEEEEEC-
T ss_pred CCeEEEEcCCCCEEEEEEcCCcc-------CCcccccCCCCeeE-ECCCCCEEEEcCC-ceEEEEEec
Confidence 99999999 66653333221111 01123477999999 7999999999766 599999865
No 94
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.73 E-value=0.0013 Score=65.44 Aligned_cols=149 Identities=17% Similarity=0.064 Sum_probs=87.7
Q ss_pred CCceEEEEccCCc-EEEEECCCCeEEEEeCC-CCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEE
Q 011333 83 IEPYSVEVLPGGE-LLILDSANSNLYRISSS-LSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 159 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~-g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVA 159 (488)
..|+++++++||. ||++|.+.++|+.++.+ + +++..+... .. . ..-..|.+++++++|. ||++
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~---g~~~~~~~~-~~-~---------~~g~~p~~~~~spdg~~l~v~ 210 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLAS---GEVELVGSV-DA-P---------DPGDHPRWVAMHPTGNYLYAL 210 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTT---SCEEEEEEE-EC-S---------STTCCEEEEEECTTSSEEEEE
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEECCC---CCEEEeeeE-ec-C---------CCCCCCCEeEECCCCCEEEEE
Confidence 4789999999997 89999888999999876 4 333222110 00 0 0023599999999994 8999
Q ss_pred ECCCCEEEEEc-C---CCcE----EEeCCccCCCCCCCCCCcccccCCCCCeeE-EECCCCeEEEEECCCC-----eEEE
Q 011333 160 DTMNMAIRKIS-D---SGVT----TIAGGKWGRGGGHVDGPSEDAKFSNDFDVV-YIGSSCSLLVIDRGNR-----AIRE 225 (488)
Q Consensus 160 D~~N~rIrkid-~---ggVt----tIaGg~~g~~~g~~dG~~~~a~f~~P~gIa-~vd~~G~LYVaD~gN~-----rIrk 225 (488)
+..++.|..++ + +.+. ++.....+. .+. .+... ....|.+++ +.++...||+++++.+ .|..
T Consensus 211 ~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~-~g~-~~~~~--~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v 286 (365)
T 1jof_A 211 MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI-PDR-DPETG--KGLYRADVCALTFSGKYMFASSRANKFELQGYIAG 286 (365)
T ss_dssp ETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC-CCB-CTTTS--SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEE
T ss_pred ECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc-CCc-ccccc--cccccccEEEECCCCCEEEEECCCCCCCCCCeEEE
Confidence 98788888775 2 3332 222211110 000 00000 122578888 6444446899998766 8888
Q ss_pred EEcC--CCceE---Eec-cCCCcceEEEEe
Q 011333 226 IQLH--FDDCA---YQY-GSSFPLGIAVLL 249 (488)
Q Consensus 226 I~~~--g~~~~---~~~-~~g~P~GIav~~ 249 (488)
++++ +.... ... ....|.++++..
T Consensus 287 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp 316 (365)
T 1jof_A 287 FKLRDCGSIEKQLFLSPTPTSGGHSNAVSP 316 (365)
T ss_dssp EEECTTSCEEEEEEEEECSSCCTTCCCEEE
T ss_pred EEECCCCCEEEeeeeeecCCCCcccceecC
Confidence 8874 32221 111 223567777665
No 95
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.72 E-value=0.0013 Score=64.50 Aligned_cols=153 Identities=15% Similarity=0.148 Sum_probs=97.5
Q ss_pred CCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccE--EEecCCCCccccCCCcccccccCCcceEEEcCCC-cEEEE
Q 011333 83 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPK--LVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIA 159 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~--tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~LYVA 159 (488)
..+.||+++++|.++|++..+++|+.++.+.. +.+. ...... . +. ...=....|||+|+++ .||++
T Consensus 70 ~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~--~~i~~~~~~~~~--~-~~------~~~N~g~EGLA~d~~~~~L~va 138 (255)
T 3qqz_A 70 KDLETIEYIGDNQFVISDERDYAIYVISLTPN--SEVKILKKIKIP--L-QE------SPTNCGFEGLAYSRQDHTFWFF 138 (255)
T ss_dssp SSEEEEEECSTTEEEEEETTTTEEEEEEECTT--CCEEEEEEEECC--C-SS------CCCSSCCEEEEEETTTTEEEEE
T ss_pred CChHHeEEeCCCEEEEEECCCCcEEEEEcCCC--Ceeeeeeeeccc--c-cc------ccccCCcceEEEeCCCCEEEEE
Confidence 47999999999999999988999998875532 2211 111110 0 00 0001235899999987 68887
Q ss_pred ECC-CCEEEEEc---CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 011333 160 DTM-NMAIRKIS---DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 160 D~~-N~rIrkid---~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~ 234 (488)
--. ..+|..++ .+. ++.+. ... ......+..+.+|++.+..++|||....+++|..++..|....
T Consensus 139 ~E~~p~~i~~~~g~~~~~~l~i~~-~~~---------~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~ 208 (255)
T 3qqz_A 139 KEKNPIEVYKVNGLLSSNELHISK-DKA---------LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG 208 (255)
T ss_dssp EESSSEEEEEEESTTCSSCCEEEE-CHH---------HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEE
T ss_pred ECcCCceEEEEcccccCCceeeec-chh---------hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEE
Confidence 644 34788887 111 22221 100 0001124568999988889999999999999999999997554
Q ss_pred Eecc----------CCCcceEEEEecCCceEEEE
Q 011333 235 YQYG----------SSFPLGIAVLLAAGFFGYML 258 (488)
Q Consensus 235 ~~~~----------~g~P~GIav~~g~g~~Gy~~ 258 (488)
...- ...|.|||++..+ .-|+.
T Consensus 209 ~~~L~~g~~~l~~~~~qpEGia~d~~G--~lyIv 240 (255)
T 3qqz_A 209 EMSLTKGSRGLSHNIKQAEGVAMDASG--NIYIV 240 (255)
T ss_dssp EEECSTTGGGCSSCCCSEEEEEECTTC--CEEEE
T ss_pred EEEcCCccCCcccccCCCCeeEECCCC--CEEEE
Confidence 4221 1378999999652 35554
No 96
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.66 E-value=0.00069 Score=67.40 Aligned_cols=133 Identities=13% Similarity=0.055 Sum_probs=79.2
Q ss_pred CCCceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccE----EEecCCCCccccCCCcccccccCCcceEE-EcCCCc
Q 011333 82 GIEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPK----LVAGSAEGYSGHVDGKPREARMNHPKGLT-VDDRGN 155 (488)
Q Consensus 82 l~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~----tvaG~~~G~~G~~dG~a~~a~Ln~P~GIA-vD~dG~ 155 (488)
...|.++++++||. ||+++..++.|..++.+... |... .+.....+..|+ .+.. .....|.+|+ ++++|+
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~~~~~~~~~~g~-~~~~--~~~~~~~~i~~~spdG~ 267 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT-HMPVYTHHSFPLIPPGIPDR-DPET--GKGLYRADVCALTFSGK 267 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT-CCEEEEEEEEESSCTTCCCB-CTTT--SSBSEEEEEEEECTTSS
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC-CcEEEccceEEcCCCCcCCc-cccc--ccccccccEEEECCCCC
Confidence 34699999999995 88998877888777543100 2221 121111111111 0000 0122588999 999996
Q ss_pred -EEEEECCCC-----EEEEEc---CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEEC---CCCeEEEEECCCCeE
Q 011333 156 -IYIADTMNM-----AIRKIS---DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIG---SSCSLLVIDRGNRAI 223 (488)
Q Consensus 156 -LYVAD~~N~-----rIrkid---~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd---~~G~LYVaD~gN~rI 223 (488)
||+++...+ +|..++ ++.+..+...... .-..|.++++.+ +...||+++..++.|
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-------------~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT-------------PTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-------------SSCCTTCCCEEECTTCTTEEEEECSSSCEE
T ss_pred EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-------------CCCCcccceecCCCcCCCEEEEEEcCCCeE
Confidence 899987655 888776 3445432110000 012467788555 466899999888889
Q ss_pred EEEEcCCC
Q 011333 224 REIQLHFD 231 (488)
Q Consensus 224 rkI~~~g~ 231 (488)
..++.+..
T Consensus 335 ~v~~~~~~ 342 (365)
T 1jof_A 335 EIYRWKDE 342 (365)
T ss_dssp EEEEEETT
T ss_pred EEEEEchh
Confidence 88887765
No 97
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.65 E-value=0.00035 Score=67.14 Aligned_cols=117 Identities=9% Similarity=-0.020 Sum_probs=77.8
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEECCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTMN 163 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~~N 163 (488)
++|+++.+++.+|++...++.|++++..++ ++....... . ...|.+++++++|+ +|+++..+
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~~v~~~d~~~~---~~~~~~~~~-~-------------~~~~~~~~~s~dg~~~~v~~~~~ 64 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPNNLHVVDVASD---TVYKSCVMP-D-------------KFGPGTAMMAPDNRTAYVLNNHY 64 (349)
T ss_dssp --CCCCCTTCEEEEEEETTTEEEEEETTTT---EEEEEEECS-S-------------CCSSCEEEECTTSSEEEEEETTT
T ss_pred CccccccCCCEEEEEeCCCCeEEEEECCCC---cEEEEEecC-C-------------CCCCceeEECCCCCEEEEEeCCC
Confidence 356777888999999999999999998753 222221110 0 12488999999996 89999889
Q ss_pred CEEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECC-----------CCeEEEEEc
Q 011333 164 MAIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRG-----------NRAIREIQL 228 (488)
Q Consensus 164 ~rIrkid-~-ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~g-----------N~rIrkI~~ 228 (488)
+.|..++ . +.+ .++...... ...-..|.++++ +++| .||+++.. .+.|+.+++
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~~-----------~~~~~~~~~~~~-spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~ 132 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSVP-----------GEVGRSMYSFAI-SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST 132 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCST-----------TEEEECSSCEEE-CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred CcEEEEeCCCCcEEEEEEccccc-----------ccccccccceEE-CCCCCEEEEEcccccccccccccCCCeEEEEEC
Confidence 9999999 3 333 333221100 001235788984 5555 78888854 579999998
Q ss_pred CC
Q 011333 229 HF 230 (488)
Q Consensus 229 ~g 230 (488)
..
T Consensus 133 ~~ 134 (349)
T 1jmx_B 133 AD 134 (349)
T ss_dssp GG
T ss_pred CC
Confidence 64
No 98
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.64 E-value=0.0011 Score=65.32 Aligned_cols=126 Identities=14% Similarity=0.064 Sum_probs=80.1
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.++|++.| .+.||++|. .++|+.+|+.+.. .+..+.= +. +| ..+..++.+... +|.||++....
T Consensus 128 eG~glt~d-g~~L~~SdG-s~~i~~iDp~T~~--v~~~I~V---~~----~g----~~~~~lNELe~~-~G~lyan~w~~ 191 (262)
T 3nol_A 128 EGWGLTHN-DQYLIMSDG-TPVLRFLDPESLT--PVRTITV---TA----HG----EELPELNELEWV-DGEIFANVWQT 191 (262)
T ss_dssp CCCCEEEC-SSCEEECCS-SSEEEEECTTTCS--EEEEEEC---EE----TT----EECCCEEEEEEE-TTEEEEEETTS
T ss_pred CceEEecC-CCEEEEECC-CCeEEEEcCCCCe--EEEEEEe---cc----CC----ccccccceeEEE-CCEEEEEEccC
Confidence 45566653 356999995 7899999998532 2222211 00 11 125667778876 79999999999
Q ss_pred CEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 164 MAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 164 ~rIrkid--~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
+.|.+|| ++.|.-......-. ............|+|||+.+..+.|||+...=..+.+|.+.
T Consensus 192 ~~I~vIDp~tG~V~~~Id~~~L~----~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 192 NKIVRIDPETGKVTGIIDLNGIL----AEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp SEEEEECTTTCBEEEEEECTTGG----GGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCcCc----cccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 9999999 45554333211000 00000112245789999877789999999877788887754
No 99
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.62 E-value=0.0039 Score=61.23 Aligned_cols=112 Identities=15% Similarity=0.347 Sum_probs=80.4
Q ss_pred CceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEEC
Q 011333 84 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~ 161 (488)
.|.+++++++|. ||++...++.|+.++..+ +++...... -..+.+++++++|+ ||++..
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~---~~~~~~~~~----------------~~~v~~~~~spdg~~l~~~~~ 93 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTAT---NNVIATVPA----------------GSSPQGVAVSPDGKQVYVTNM 93 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTT---TEEEEEEEC----------------SSSEEEEEECTTSSEEEEEET
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCC---CeEEEEEEC----------------CCCccceEECCCCCEEEEEEC
Confidence 578999999997 778887888999999875 233222221 11578999999997 889998
Q ss_pred CCCEEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCCCce
Q 011333 162 MNMAIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 162 ~N~rIrkid-~-ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
..+.|+.++ . +.+ .++... ..+.++++ .++| .||++...++.|+.+++....+
T Consensus 94 ~~~~v~v~d~~~~~~~~~~~~~------------------~~~~~~~~-s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 94 ASSTLSVIDTTSNTVAGTVKTG------------------KSPLGLAL-SPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECS------------------SSEEEEEE-CTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCeEEEEEeCC------------------CCcceEEE-CCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 889999999 3 333 333221 14678884 5555 5789998899999999876544
No 100
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.54 E-value=0.0018 Score=63.20 Aligned_cols=127 Identities=12% Similarity=0.092 Sum_probs=81.6
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.++|++-+ .+.||++|. .++|+.+|+.+.. .+..+. . +. +| ..+..++.|... +|.||++.+..
T Consensus 106 ~Gwglt~d-g~~L~vSdg-s~~l~~iDp~t~~--~~~~I~-V--~~----~g----~~~~~lNeLe~~-~G~lyanvw~s 169 (243)
T 3mbr_X 106 EGWALTSD-DSHLYMSDG-TAVIRKLDPDTLQ--QVGSIK-V--TA----GG----RPLDNLNELEWV-NGELLANVWLT 169 (243)
T ss_dssp CCCEEEEC-SSCEEEECS-SSEEEEECTTTCC--EEEEEE-C--EE----TT----EECCCEEEEEEE-TTEEEEEETTT
T ss_pred CceEEeeC-CCEEEEECC-CCeEEEEeCCCCe--EEEEEE-E--cc----CC----cccccceeeEEe-CCEEEEEECCC
Confidence 56777754 457999995 8899999998532 222221 1 00 11 125566777766 89999999999
Q ss_pred CEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 164 MAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 164 ~rIrkid--~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
+.|.+|| +|.|.-......-... . .........-|+|||+.+..++|||+...=..+.+|.+.
T Consensus 170 ~~I~vIDp~tG~V~~~idl~~l~~~--~-~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 170 SRIARIDPASGKVVAWIDLQALVPD--A-DALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp TEEEEECTTTCBEEEEEECGGGSTT--T-TSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEECCcCccc--c-ccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 9999999 5555433322111000 0 000012345789999877789999999877888888865
No 101
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.51 E-value=0.0019 Score=61.40 Aligned_cols=115 Identities=12% Similarity=0.105 Sum_probs=75.1
Q ss_pred CceEEEEccCC-cEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC-cEEEEEC
Q 011333 84 EPYSVEVLPGG-ELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG-~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~LYVAD~ 161 (488)
.|.+++++++| .||+++...+.|++++..++ +....... +..+ ..-..|.+++++++| .||+++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~---~~~~~~~~--~~~~--------~~~~~~~~~~~s~dg~~l~~~~~ 101 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTG---ETLGRIDL--STPE--------ERVKSLFGAALSPDGKTLAIYES 101 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTC---CEEEEEEC--CBTT--------EEEECTTCEEECTTSSEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCC---CeEeeEEc--CCcc--------cccccccceEECCCCCEEEEEec
Confidence 48899999998 48999988899999998752 32222111 0000 001258899999999 5999862
Q ss_pred -----------CCCEEEEEc-CC-Cc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEE
Q 011333 162 -----------MNMAIRKIS-DS-GV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREI 226 (488)
Q Consensus 162 -----------~N~rIrkid-~g-gV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaD~gN~rIrkI 226 (488)
.++.|+.++ .. .+ ..+..+ ..|.+++ ++++|+ ||++ ++.|+.+
T Consensus 102 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~------------------~~~~~~~-~s~dg~~l~~~---~~~i~~~ 159 (337)
T 1pby_B 102 PVRLELTHFEVQPTRVALYDAETLSRRKAFEAP------------------RQITMLA-WARDGSKLYGL---GRDLHVM 159 (337)
T ss_dssp EEEECSSCEEECCCEEEEEETTTTEEEEEEECC------------------SSCCCEE-ECTTSSCEEEE---SSSEEEE
T ss_pred ccccccccccccCceEEEEECCCCcEEEEEeCC------------------CCcceeE-ECCCCCEEEEe---CCeEEEE
Confidence 358899999 33 32 333221 1467888 455554 8888 4678888
Q ss_pred EcCCCce
Q 011333 227 QLHFDDC 233 (488)
Q Consensus 227 ~~~g~~~ 233 (488)
++.....
T Consensus 160 d~~~~~~ 166 (337)
T 1pby_B 160 DPEAGTL 166 (337)
T ss_dssp ETTTTEE
T ss_pred ECCCCcE
Confidence 8775433
No 102
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.48 E-value=0.0024 Score=63.74 Aligned_cols=110 Identities=10% Similarity=0.062 Sum_probs=77.4
Q ss_pred CceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEEC
Q 011333 84 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~ 161 (488)
.|.+++++++|. ||++....++|+.++..+ +++...... ...|.+++++++|. ||+++.
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---KKVQKSIPV----------------FDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTT---TEEEEEEEC----------------SSSEEEEEECTTSSEEEEEEC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCC---CcEEEEecC----------------CCCCCeEEEcCCCCEEEEEec
Confidence 678899999985 999988899999999875 232222221 23478999999996 888887
Q ss_pred CC--------------CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEE
Q 011333 162 MN--------------MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIR 224 (488)
Q Consensus 162 ~N--------------~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIr 224 (488)
.+ +.|+.++ .+. +.++.++ ..|.++++.++...|++++..++.|+
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~------------------~~~~~~~~s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG------------------NQPTGLDVSPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS------------------SSEEEEEECTTSCEEEEEETTTTEEE
T ss_pred CCCccccccccccccceEEEEEECCCCcEEEEecCC------------------CCCceEEEcCCCCEEEEEECCCCeEE
Confidence 64 3899998 333 3333321 24788985444446788888789999
Q ss_pred EEEcCC
Q 011333 225 EIQLHF 230 (488)
Q Consensus 225 kI~~~g 230 (488)
.+++++
T Consensus 427 v~~~~~ 432 (433)
T 3bws_A 427 VYRRDG 432 (433)
T ss_dssp EEEETT
T ss_pred EEEecC
Confidence 988753
No 103
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.40 E-value=0.0016 Score=64.50 Aligned_cols=106 Identities=11% Similarity=0.000 Sum_probs=75.5
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-+||.++ ++.||++....++|+++|+.++++ +..+.+. . -...||+++ .+.||+++..++
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv--~~~~l~~--~--------------~FgeGit~~-g~~Ly~ltw~~~ 116 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQP--VWMERLG--N--------------IFAEGLASD-GERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSC--SEEEECT--T--------------CCEEEEEEC-SSCEEEEESSSC
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcE--EeEECCC--C--------------cceeEEEEe-CCEEEEEEccCC
Confidence 3799997 589999999999999999986432 1222221 0 013568887 458999999999
Q ss_pred EEEEEcCCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 165 AIRKISDSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 165 rIrkid~gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
++.+||... +.+|.-.. .+++++ .| .+.||++| +.++|+.||+...
T Consensus 117 ~v~V~D~~Tl~~~~ti~~~~------------------eGwGLt-~D-g~~L~vSd-Gs~~l~~iDp~T~ 165 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRYSG------------------EGWGLC-YW-NGKLVRSD-GGTMLTFHEPDGF 165 (268)
T ss_dssp EEEEEETTTTEEEEEEECSS------------------CCCCEE-EE-TTEEEEEC-SSSEEEEECTTTC
T ss_pred EEEEEECCcCcEEEEEeCCC------------------ceeEEe-cC-CCEEEEEC-CCCEEEEEcCCCC
Confidence 999999443 34443211 357787 33 57999999 6899999998753
No 104
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.33 E-value=0.0022 Score=61.44 Aligned_cols=115 Identities=12% Similarity=0.138 Sum_probs=73.7
Q ss_pred CceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEEC
Q 011333 84 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~ 161 (488)
.|.+++++++|. +|+++..++.|++++..++ +........ ... ..+-..|.+++++++|. ||+++.
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~---~~~~~~~~~-~~~--------~~~~~~~~~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC---KNTFHANLS-SVP--------GEVGRSMYSFAISPDGKEVYATVN 111 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEESC-CST--------TEEEECSSCEEECTTSSEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCC---cEEEEEEcc-ccc--------ccccccccceEECCCCCEEEEEcc
Confidence 588999999986 8999988899999998752 322222110 000 01123588999999995 888874
Q ss_pred C-----------CCEEEEEc-CC-Cc----EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEE
Q 011333 162 M-----------NMAIRKIS-DS-GV----TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIR 224 (488)
Q Consensus 162 ~-----------N~rIrkid-~g-gV----ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIr 224 (488)
. ++.|..++ .. .+ .+... -..+.+++ ++++|+||+++ +.|+
T Consensus 112 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------------------~~~~~~~~-~s~dg~l~~~~---~~i~ 169 (349)
T 1jmx_B 112 PTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM------------------PRQVYLMR-AADDGSLYVAG---PDIY 169 (349)
T ss_dssp EEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC------------------CSSCCCEE-ECTTSCEEEES---SSEE
T ss_pred cccccccccccCCCeEEEEECCCccccceeeeccC------------------CCccccee-ECCCCcEEEcc---CcEE
Confidence 3 47888888 32 21 11111 01356787 56777788853 3488
Q ss_pred EEEcCCCc
Q 011333 225 EIQLHFDD 232 (488)
Q Consensus 225 kI~~~g~~ 232 (488)
.+++....
T Consensus 170 ~~d~~~~~ 177 (349)
T 1jmx_B 170 KMDVKTGK 177 (349)
T ss_dssp EECTTTCC
T ss_pred EEeCCCCc
Confidence 88876543
No 105
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.28 E-value=0.0032 Score=61.01 Aligned_cols=135 Identities=18% Similarity=0.206 Sum_probs=80.0
Q ss_pred eEEeCCCcccccCCceeEEeecCCCCCCCceEEEEccCCcEEEEECCCCeEEEEeCCCCc----ccccEEEecCCCCccc
Q 011333 56 TAITGRPMMKFESGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSL----YSRPKLVAGSAEGYSG 131 (488)
Q Consensus 56 ~~iaG~~~~~~~dG~~~~~~~~G~~~l~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~----~g~i~tvaG~~~G~~G 131 (488)
+.++|+......+.+.......|...+.+-..|+++|+|.||.+ .++.++++++.... .+. .+.+|.. |..+
T Consensus 14 ~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~-Gw~~ 89 (236)
T 1tl2_A 14 KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNG-GWNQ 89 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECS-CGGG
T ss_pred cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-ccEeccc-cccc
Confidence 44555543333334422222223333446779999999999999 56789999985311 111 3444431 2222
Q ss_pred cCCCcccccccCCcceEEEcCCCcEEEEECCCCEEEEEcC--CCc-------EEEeCCccCCCCCCCCCCcccccCCCCC
Q 011333 132 HVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKISD--SGV-------TTIAGGKWGRGGGHVDGPSEDAKFSNDF 202 (488)
Q Consensus 132 ~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rIrkid~--ggV-------ttIaGg~~g~~~g~~dG~~~~a~f~~P~ 202 (488)
=..|.+|++|+||++ .+.+|+|++. .+- ++|-.+.+. .| .
T Consensus 90 -------------F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~-------------~~---~ 138 (236)
T 1tl2_A 90 -------------FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWS-------------GF---K 138 (236)
T ss_dssp -------------CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGG-------------GE---E
T ss_pred -------------ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCC-------------ce---E
Confidence 145999999999999 3599999982 221 222222111 12 4
Q ss_pred eeEEECCCCeEEEEECCCCeEEEEEc
Q 011333 203 DVVYIGSSCSLLVIDRGNRAIREIQL 228 (488)
Q Consensus 203 gIa~vd~~G~LYVaD~gN~rIrkI~~ 228 (488)
.|+ ++++|.||-++ .+++++-..
T Consensus 139 ~lf-f~p~G~Lyav~--dg~lyr~~~ 161 (236)
T 1tl2_A 139 FLF-FHPNGYLYAVH--GQQFYKALP 161 (236)
T ss_dssp EEE-ECTTSCEEEEE--TTEEEEECC
T ss_pred EEE-ECCCceEEEEe--CCcEEecCC
Confidence 455 89999999999 555766443
No 106
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.27 E-value=0.012 Score=62.75 Aligned_cols=140 Identities=6% Similarity=-0.055 Sum_probs=91.3
Q ss_pred CceEEEEccCCc-EEEEECCCCeEEEEeC--CCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC----CCc-
Q 011333 84 EPYSVEVLPGGE-LLILDSANSNLYRISS--SLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD----RGN- 155 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~--~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~----dG~- 155 (488)
.|+++++++||. ||+++.. +.|..++. .+. ..+.++.. -..|.+|++++ +|.
T Consensus 180 ~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~--~~~~~i~~-----------------g~~p~~va~sp~~~~dg~~ 239 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEP--TKVAEIKI-----------------GIEARSVESSKFKGYEDRY 239 (543)
T ss_dssp TEEEEEECTTSCEEEEEETT-SEEEEEETTSSSC--EEEEEEEC-----------------CSEEEEEEECCSTTCTTTE
T ss_pred ccceEEECCCCCEEEEECCC-CeEEEEECcCCCC--cEEEEEec-----------------CCCcceEEeCCCcCCCCCE
Confidence 389999999986 8888876 89999998 431 12222221 12489999999 885
Q ss_pred EEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCccccc-CCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 156 IYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAK-FSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 156 LYVAD~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~-f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
||+++...+.|..+| .+. +.++....... ++ .+.. -..+.+|++.+..+.+||+..+.+.|+.++....
T Consensus 240 l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~-----~~--~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 240 TIAGAYWPPQFAIMDGETLEPKQIVSTRGMTV-----DT--QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp EEEEEEESSEEEEEETTTCCEEEEEECCEECS-----SS--CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred EEEEEccCCeEEEEeccccccceeecccCccc-----Cc--cccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 899998889999999 333 44444321100 00 0000 1246678855557789999999999999998653
Q ss_pred ce-E--EeccCCCcceEEEEec
Q 011333 232 DC-A--YQYGSSFPLGIAVLLA 250 (488)
Q Consensus 232 ~~-~--~~~~~g~P~GIav~~g 250 (488)
.+ . .......|.+++++..
T Consensus 313 ~~l~~~~i~~~~~~~~~~~spd 334 (543)
T 1nir_A 313 DNLTVTSIGAAPFLHDGGWDSS 334 (543)
T ss_dssp SSCEEEEEECCSSCCCEEECTT
T ss_pred CcceeEEeccCcCccCceECCC
Confidence 22 1 2223346778887744
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.25 E-value=0.0033 Score=62.71 Aligned_cols=136 Identities=10% Similarity=0.083 Sum_probs=91.3
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.|.++++++++.++++....+.|+.++..+ +......... ...+ ......+++++++|.+|++....
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~-~~~~---------~~~~v~~~~~~~~~~~~~s~~~d 190 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINS---GQTVRLSPPE-KYKK---------KLGFVETISIPEHNELWVSQMQA 190 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTT---CCEEEECCCH-HHHT---------TCCEEEEEEEGGGTEEEEEEGGG
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCC---CeEeeecCcc-cccc---------cCCceeEEEEcCCCEEEEEECCC
Confidence 577899999888999988888999999875 2333222110 0011 12345679999999999999988
Q ss_pred CEEEEEc-CC-C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE-eccC
Q 011333 164 MAIRKIS-DS-G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY-QYGS 239 (488)
Q Consensus 164 ~rIrkid-~g-g-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~-~~~~ 239 (488)
+.|+.++ +. . +.++.+. -..+.++++.+....||+++...+.|+.+++....+.. ....
T Consensus 191 ~~v~~~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 253 (433)
T 3bws_A 191 NAVHVFDLKTLAYKATVDLT-----------------GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI 253 (433)
T ss_dssp TEEEEEETTTCCEEEEEECS-----------------SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC
T ss_pred CEEEEEECCCceEEEEEcCC-----------------CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC
Confidence 9999999 33 3 3444321 12567888665556788999888999999987554433 2223
Q ss_pred CCcceEEEEe
Q 011333 240 SFPLGIAVLL 249 (488)
Q Consensus 240 g~P~GIav~~ 249 (488)
+.|.++++..
T Consensus 254 ~~~~~~~~~~ 263 (433)
T 3bws_A 254 GLPRGLLLSK 263 (433)
T ss_dssp SEEEEEEECT
T ss_pred CCceEEEEcC
Confidence 3455666653
No 108
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.10 E-value=0.0037 Score=65.56 Aligned_cols=110 Identities=14% Similarity=0.066 Sum_probs=72.5
Q ss_pred CC-cEEEEECCC----CeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEEC-----
Q 011333 93 GG-ELLILDSAN----SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT----- 161 (488)
Q Consensus 93 dG-~LYVaD~~n----~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~----- 161 (488)
++ .+||++... +.|.+||..+.+ .+.++. . | ..| ||++++||. |||++.
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~--vv~~I~-v-----G-----------~~P-gia~SpDgk~lyVan~~~~~~ 142 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGR--ILGMTD-G-----G-----------FLP-HPVAAEDGSFFAQASTVFERI 142 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTE--EEEEEE-E-----C-----------SSC-EEEECTTSSCEEEEEEEEEET
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCE--EEEEEE-C-----C-----------CCC-ceEECCCCCEEEEEecccccc
Confidence 44 599999865 799999988532 122221 1 0 248 999999995 999986
Q ss_pred ----CCCEEEEEc--CCC-cEEEe-CCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC-CCeEEEEEcCCCc
Q 011333 162 ----MNMAIRKIS--DSG-VTTIA-GGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-NRAIREIQLHFDD 232 (488)
Q Consensus 162 ----~N~rIrkid--~gg-VttIa-Gg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-N~rIrkI~~~g~~ 232 (488)
..+.|.+|| .+. +.+|. ++.... .....|.++++.++...|||++.. .+.|.+||.....
T Consensus 143 ~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~-----------~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 143 ARGKRTDYVEVFDPVTFLPIADIELPDAPRF-----------LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp TEEEEEEEEEEECTTTCCEEEEEEETTCCCC-----------CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred ccCCCCCEEEEEECCCCcEEEEEECCCcccc-----------ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence 356799999 333 34443 211000 012468999954444589999975 7899999988654
Q ss_pred e
Q 011333 233 C 233 (488)
Q Consensus 233 ~ 233 (488)
.
T Consensus 212 v 212 (426)
T 3c75_H 212 F 212 (426)
T ss_dssp E
T ss_pred E
Confidence 3
No 109
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.07 E-value=0.034 Score=57.01 Aligned_cols=161 Identities=14% Similarity=0.153 Sum_probs=96.9
Q ss_pred CCceeEEeecCCCCCCCceEEEEccC----C----cEEEEECC--CCeEEEE--eCCCCcccccEEEecCCCCccccCCC
Q 011333 68 SGYTVETVFDGSKLGIEPYSVEVLPG----G----ELLILDSA--NSNLYRI--SSSLSLYSRPKLVAGSAEGYSGHVDG 135 (488)
Q Consensus 68 dG~~~~~~~~G~~~l~~P~GIaVd~d----G----~LYVaD~~--n~rI~ki--d~~g~~~g~i~tvaG~~~G~~G~~dG 135 (488)
+|........| .+++|.+-++ | .+|++|.. +++|..| ++.. +.+..+ +.. .
T Consensus 58 ~G~~l~~~~~g-----~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~---~~l~~i-~~~-------~- 120 (355)
T 3amr_A 58 DGKMLHSYNTG-----KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN---GTLQSM-TDP-------D- 120 (355)
T ss_dssp TSCEEEEECCS-----CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT---CCEEEC-SCT-------T-
T ss_pred CCcEEEEccCC-----CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC---Cceeec-ccc-------c-
Confidence 45544443322 5677766542 2 36889988 8988888 5443 233322 210 0
Q ss_pred cccccccCCcceEEE--cCC-Cc--EEEEECCCCEEEEEc-----CCCc-----EEEeCCccCCCCCCCCCCcccccCCC
Q 011333 136 KPREARMNHPKGLTV--DDR-GN--IYIADTMNMAIRKIS-----DSGV-----TTIAGGKWGRGGGHVDGPSEDAKFSN 200 (488)
Q Consensus 136 ~a~~a~Ln~P~GIAv--D~d-G~--LYVAD~~N~rIrkid-----~ggV-----ttIaGg~~g~~~g~~dG~~~~a~f~~ 200 (488)
.+....+..|.|||+ ++. |. +||.+.. +++..+. ++.+ .++.-+ ..
T Consensus 121 ~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lg------------------sq 181 (355)
T 3amr_A 121 HPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMN------------------SQ 181 (355)
T ss_dssp SCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECS------------------SC
T ss_pred cCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCC------------------CC
Confidence 001123688999999 774 53 8888865 6777644 2222 222211 25
Q ss_pred CCeeEEECCCCeEEEEECCCCeEEEEEcCCCc-----eE-EeccC---CCcceEEEEecCCceEEEEEEEEecc
Q 011333 201 DFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD-----CA-YQYGS---SFPLGIAVLLAAGFFGYMLALLQRRV 265 (488)
Q Consensus 201 P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~-----~~-~~~~~---g~P~GIav~~g~g~~Gy~~a~l~~~~ 265 (488)
|.++++.+..+.|||++...+ ||+|+.+... .. ..... .-+.||++..+...-||.+++-|..-
T Consensus 182 ~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 182 TEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp EEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred cceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 778886667899999998754 9999966321 11 11111 35789999866556789888877663
No 110
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.04 E-value=0.0048 Score=63.96 Aligned_cols=111 Identities=16% Similarity=0.128 Sum_probs=72.8
Q ss_pred ccCCc-EEEEECC----CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEECC--
Q 011333 91 LPGGE-LLILDSA----NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTM-- 162 (488)
Q Consensus 91 d~dG~-LYVaD~~----n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~~-- 162 (488)
.|+|. |||+|.. .++|.+||..+.. .+.++.. | ..|. |++++||. +||+++.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~--v~~~I~v------G-----------~~P~-va~spDG~~lyVan~~~~ 100 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGR--VIGMIDG------G-----------FLPN-PVVADDGSFIAHASTVFS 100 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTE--EEEEEEE------C-----------SSCE-EEECTTSSCEEEEEEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCe--EEEEEEC------C-----------CCCc-EEECCCCCEEEEEccccc
Confidence 35664 9999986 6799999987532 1222211 1 1374 99999995 9999852
Q ss_pred -------CCEEEEEc--CCC-cEEEe-CC-ccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC-CCeEEEEEcC
Q 011333 163 -------NMAIRKIS--DSG-VTTIA-GG-KWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-NRAIREIQLH 229 (488)
Q Consensus 163 -------N~rIrkid--~gg-VttIa-Gg-~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-N~rIrkI~~~ 229 (488)
.+.|.+|| ... +.+|. +. +.. ..-..|.++++.++...|||++.. .+.|..||..
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~------------~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTADIELPDAPRF------------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC------------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCCcccc------------ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence 46799999 333 34442 21 100 012379999954445579999974 7899999988
Q ss_pred CCce
Q 011333 230 FDDC 233 (488)
Q Consensus 230 g~~~ 233 (488)
....
T Consensus 169 t~~v 172 (386)
T 3sjl_D 169 GKAF 172 (386)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 6543
No 111
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.02 E-value=0.012 Score=59.75 Aligned_cols=115 Identities=8% Similarity=-0.069 Sum_probs=71.0
Q ss_pred CCceEEEEccCCc-EEEEEC---------CCCeEEEEeCCCCcccccEEE-ecCCCCccccCCCcccccccCCcceEEEc
Q 011333 83 IEPYSVEVLPGGE-LLILDS---------ANSNLYRISSSLSLYSRPKLV-AGSAEGYSGHVDGKPREARMNHPKGLTVD 151 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~---------~n~rI~kid~~g~~~g~i~tv-aG~~~G~~G~~dG~a~~a~Ln~P~GIAvD 151 (488)
..| +|++++||. |||++. ..+.|.+||..+.. .+..+ ++.. + .......|.+++++
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--~~~~i~~~~~----~------~~~~g~~p~~~~~s 133 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--PIADIELPDA----P------RFDVGPYSWMNANT 133 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--EEEEEECCCc----c------ccccCCCccceEEC
Confidence 368 999999986 999984 24678899986421 11222 1100 0 00002469999999
Q ss_pred CCCc-EEEEECC-CCEEEEEcCCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEc
Q 011333 152 DRGN-IYIADTM-NMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQL 228 (488)
Q Consensus 152 ~dG~-LYVAD~~-N~rIrkid~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~ 228 (488)
+||. |||+... .+.|..|| ..-..+.- .+..|.++.+.+....+|++.+..+++..|+.
T Consensus 134 pDG~~l~v~n~~~~~~v~viD-~t~~~~~~-----------------~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 134 PNNADLLFFQFAAGPAVGLVV-QGGSSDDQ-----------------LLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred CCCCEEEEEecCCCCeEEEEE-CCCCEEeE-----------------EcCCCceEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 9995 9999865 68899998 44222211 01112233334555567788877888888877
No 112
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.02 E-value=0.0053 Score=67.04 Aligned_cols=122 Identities=18% Similarity=0.186 Sum_probs=76.8
Q ss_pred CCCCCceEEEEcc-CCcEEEEECCC---------------------CeEEEEeCCCCcc------cccEEEecCCCCccc
Q 011333 80 KLGIEPYSVEVLP-GGELLILDSAN---------------------SNLYRISSSLSLY------SRPKLVAGSAEGYSG 131 (488)
Q Consensus 80 ~~l~~P~GIaVd~-dG~LYVaD~~n---------------------~rI~kid~~g~~~------g~i~tvaG~~~G~~G 131 (488)
..+..|.++++++ +|.|||+-+.+ ++|+++.+++... ..+.+++|.+....+
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 3466999999997 89999996643 5799997653211 112334443211000
Q ss_pred ----cCCCcccccccCCcceEEEcCCCcEEEEEC------------CCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCc
Q 011333 132 ----HVDGKPREARMNHPKGLTVDDRGNIYIADT------------MNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPS 193 (488)
Q Consensus 132 ----~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~------------~N~rIrkid--~ggVttIaGg~~g~~~g~~dG~~ 193 (488)
..........|+.|-+|+||+.|+|||+.- .|+.+..++ .+.+..++.++.+.
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~ga--------- 531 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGC--------- 531 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTC---------
T ss_pred cccccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCc---------
Confidence 001112334699999999999999999854 356777777 45677777554321
Q ss_pred ccccCCCCCeeEEECCCCeEEEE
Q 011333 194 EDAKFSNDFDVVYIGSSCSLLVI 216 (488)
Q Consensus 194 ~~a~f~~P~gIa~vd~~G~LYVa 216 (488)
...|+++.++...|||.
T Consensus 532 ------E~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 532 ------EVTGISFSPDQKTLFVG 548 (592)
T ss_dssp ------EEEEEEECTTSSEEEEE
T ss_pred ------cCcCeeECCCCCEEEEE
Confidence 45788865555567774
No 113
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.99 E-value=0.014 Score=58.55 Aligned_cols=48 Identities=8% Similarity=0.062 Sum_probs=33.6
Q ss_pred CCeeEEECCCCeEEEEECCCCeEEEEEcCCC--ceEEe-cc-CCCcceEEEEec
Q 011333 201 DFDVVYIGSSCSLLVIDRGNRAIREIQLHFD--DCAYQ-YG-SSFPLGIAVLLA 250 (488)
Q Consensus 201 P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~--~~~~~-~~-~g~P~GIav~~g 250 (488)
|++|++.++...||+++. +.|..|+.... ..... .. ...|.+|++...
T Consensus 307 p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCC
T ss_pred eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEecCC
Confidence 899996655557888885 89999998765 44332 22 346888887644
No 114
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.89 E-value=0.033 Score=52.71 Aligned_cols=127 Identities=10% Similarity=0.001 Sum_probs=77.5
Q ss_pred cEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC-cEEEEECCCCEEEEEc--C
Q 011333 95 ELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADTMNMAIRKIS--D 171 (488)
Q Consensus 95 ~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~LYVAD~~N~rIrkid--~ 171 (488)
+++++....+.|+.++..++ ++...... + + ....|.+++++++| .+|+++...+.|..++ .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~---~~~~~~~~--~------~-----~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 65 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM---AVDKVITI--A------D-----AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT---EEEEEEEC--T------T-----CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCCC---cEEEEEEc--C------C-----CCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC
Confidence 45666667778888887642 22221111 0 0 01138899999999 5899999889999999 3
Q ss_pred CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEEC-----------CCCeEEEEEcCCCceEE-ec
Q 011333 172 SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDR-----------GNRAIREIQLHFDDCAY-QY 237 (488)
Q Consensus 172 ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~-----------gN~rIrkI~~~g~~~~~-~~ 237 (488)
+.+ .++..+..+ ..-..|.+++ ++++| .||+++. .++.|+.+++....... ..
T Consensus 66 ~~~~~~~~~~~~~------------~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 66 GETLGRIDLSTPE------------ERVKSLFGAA-LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp CCEEEEEECCBTT------------EEEECTTCEE-ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE
T ss_pred CCeEeeEEcCCcc------------cccccccceE-ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe
Confidence 443 333321100 0012578898 55566 7999863 35899999987654432 22
Q ss_pred cCCCcceEEEEec
Q 011333 238 GSSFPLGIAVLLA 250 (488)
Q Consensus 238 ~~g~P~GIav~~g 250 (488)
....|.++++...
T Consensus 133 ~~~~~~~~~~s~d 145 (337)
T 1pby_B 133 APRQITMLAWARD 145 (337)
T ss_dssp CCSSCCCEEECTT
T ss_pred CCCCcceeEECCC
Confidence 3345777776543
No 115
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.87 E-value=0.006 Score=63.97 Aligned_cols=75 Identities=8% Similarity=-0.071 Sum_probs=53.3
Q ss_pred CCceEEEEccCCc-EEEEEC---------CCCeEEEEeCCCCcccccEEE-ecCCCCccccCCCcccccccCCcceEEEc
Q 011333 83 IEPYSVEVLPGGE-LLILDS---------ANSNLYRISSSLSLYSRPKLV-AGSAEGYSGHVDGKPREARMNHPKGLTVD 151 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~---------~n~rI~kid~~g~~~g~i~tv-aG~~~G~~G~~dG~a~~a~Ln~P~GIAvD 151 (488)
..| +|++++||. |||++. ..+.|.+||..+.. .+..+ ++.... ......|.+++++
T Consensus 119 ~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--vv~~I~v~g~~r----------~~~g~~P~~~~~s 185 (426)
T 3c75_H 119 FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--PIADIELPDAPR----------FLVGTYQWMNALT 185 (426)
T ss_dssp SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--EEEEEEETTCCC----------CCBSCCGGGSEEC
T ss_pred CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--EEEEEECCCccc----------cccCCCcceEEEc
Confidence 479 999999987 999985 35679999987532 22222 221000 0012569999999
Q ss_pred CCC-cEEEEECC-CCEEEEEc
Q 011333 152 DRG-NIYIADTM-NMAIRKIS 170 (488)
Q Consensus 152 ~dG-~LYVAD~~-N~rIrkid 170 (488)
+|| .|||++.. .+.|.+||
T Consensus 186 pDGk~lyV~n~~~~~~VsVID 206 (426)
T 3c75_H 186 PDNKNLLFYQFSPAPAVGVVD 206 (426)
T ss_dssp TTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCEEEEEecCCCCeEEEEE
Confidence 999 59999875 78999999
No 116
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.83 E-value=0.0056 Score=65.38 Aligned_cols=107 Identities=7% Similarity=-0.092 Sum_probs=76.2
Q ss_pred EEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEECCCCEEE
Q 011333 89 EVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTMNMAIR 167 (488)
Q Consensus 89 aVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~~N~rIr 167 (488)
+++++|.+||+....+.|..+|..++. .+.++... . .|.+++++++|+ ||+++.. +.|+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~--~~~~i~~g----------------~-~~~~v~~spdg~~l~v~~~d-~~V~ 203 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKK--IVKVIDTG----------------Y-AVHISRMSASGRYLLVIGRD-ARID 203 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCC--EEEEEECS----------------T-TEEEEEECTTSCEEEEEETT-SEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCce--EEEEEecC----------------c-ccceEEECCCCCEEEEECCC-CeEE
Confidence 367889999999999999999987532 22333211 1 278999999995 8999976 9999
Q ss_pred EEcC--CCc---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEEC----CCCeEEEEECCCCeEEEEEcCCCce
Q 011333 168 KISD--SGV---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIG----SSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 168 kid~--ggV---ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd----~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
.+|- ... .++..+ ..|.+|++.+ +...|||++...+.|..++.....+
T Consensus 204 v~D~~~~t~~~~~~i~~g------------------~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 204 MIDLWAKEPTKVAEIKIG------------------IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp EEETTSSSCEEEEEEECC------------------SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred EEECcCCCCcEEEEEecC------------------CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 9995 332 333221 2588999543 4557999998888999998765433
No 117
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.76 E-value=0.12 Score=55.74 Aligned_cols=130 Identities=5% Similarity=-0.091 Sum_probs=80.6
Q ss_pred CCceEEEEccCCc-EEEEECCCCeEEEEeCC--CCcccccEEEecCCCCccccCCCcccccccCCcceEEEc----CCC-
Q 011333 83 IEPYSVEVLPGGE-LLILDSANSNLYRISSS--LSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVD----DRG- 154 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~--g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD----~dG- 154 (488)
..|+++++++||. |||++. .+.|.+||.. +. ..+..+.- -..|.+|+++ ++|
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~--~~v~~i~~-----------------G~~P~~ia~s~~~~pDGk 256 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEP--TTVAEIKI-----------------GSEARSIETSKMEGWEDK 256 (567)
T ss_dssp SCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSC--CEEEEEEC-----------------CSEEEEEEECCSTTCTTT
T ss_pred CCccceEECCCCCEEEEEcC-CCeEEEEECCCCCC--cEeEEEec-----------------CCCCceeEEccccCCCCC
Confidence 4789999999987 888875 5699999984 21 12222211 0248999999 588
Q ss_pred cEEEEECCCCEEEEEcC--CC-cEEEeCCccCCCC-----C--------CCC-----------CCcccc-----------
Q 011333 155 NIYIADTMNMAIRKISD--SG-VTTIAGGKWGRGG-----G--------HVD-----------GPSEDA----------- 196 (488)
Q Consensus 155 ~LYVAD~~N~rIrkid~--gg-VttIaGg~~g~~~-----g--------~~d-----------G~~~~a----------- 196 (488)
.+||++...+.|..||. .. +.++.-+...... . ..+ |...-.
T Consensus 257 ~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~ 336 (567)
T 1qks_A 257 YAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT 336 (567)
T ss_dssp EEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceee
Confidence 59999999999999993 22 3444322110000 0 000 000000
Q ss_pred ---cCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCCCce
Q 011333 197 ---KFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 197 ---~f~~P~gIa~vd~~G-~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
.=..|.++. ++++| .+||++...+.|.+|+......
T Consensus 337 ~i~~~~~~~d~~-~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 337 EISAERFLHDGG-LDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp EEECCSSEEEEE-ECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred eeeccccccCce-ECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 002456777 45555 5889999999999999886543
No 118
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.73 E-value=0.0089 Score=65.01 Aligned_cols=121 Identities=17% Similarity=0.191 Sum_probs=75.6
Q ss_pred cccCCcceEEEcC-CCcEEEEECCC---------------------CEEEEEc-CCC----------cEEEeCCccCCCC
Q 011333 140 ARMNHPKGLTVDD-RGNIYIADTMN---------------------MAIRKIS-DSG----------VTTIAGGKWGRGG 186 (488)
Q Consensus 140 a~Ln~P~GIAvD~-dG~LYVAD~~N---------------------~rIrkid-~gg----------VttIaGg~~g~~~ 186 (488)
..|..|.+|++++ +|.||||=+.| .+|.++. +++ +..++|.......
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 4578999999998 78999996543 5688886 221 2223332211000
Q ss_pred C---CCCCCcccccCCCCCeeEEECCCCeEEE-EEC-----------CCCeEEEEEcCCCce-EEec--cCCCcceEEEE
Q 011333 187 G---HVDGPSEDAKFSNDFDVVYIGSSCSLLV-IDR-----------GNRAIREIQLHFDDC-AYQY--GSSFPLGIAVL 248 (488)
Q Consensus 187 g---~~dG~~~~a~f~~P~gIa~vd~~G~LYV-aD~-----------gN~rIrkI~~~g~~~-~~~~--~~g~P~GIav~ 248 (488)
+ ...+......|++|.+|+ ++++|+||| +|. +|+.|+++++..... .... ....|+|+++.
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~-fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLG-FDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEE-ECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred ccccCccCccccCccCCCCceE-ECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence 0 001122345799999999 799999999 886 366899998854333 2222 23468899888
Q ss_pred ecCCceEEEEEEEEec
Q 011333 249 LAAGFFGYMLALLQRR 264 (488)
Q Consensus 249 ~g~g~~Gy~~a~l~~~ 264 (488)
... -+++...|++
T Consensus 540 PD~---ktLfV~vQHP 552 (592)
T 4a9v_A 540 PDQ---KTLFVGIQHP 552 (592)
T ss_dssp TTS---SEEEEEEEST
T ss_pred CCC---CEEEEEEeCC
Confidence 442 3456666665
No 119
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.66 E-value=0.011 Score=60.74 Aligned_cols=106 Identities=12% Similarity=-0.085 Sum_probs=70.9
Q ss_pred CcEEEEECCCC----eEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC-cEEEEEC-------
Q 011333 94 GELLILDSANS----NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADT------- 161 (488)
Q Consensus 94 G~LYVaD~~n~----rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~LYVAD~------- 161 (488)
..+||++...+ +|..||.++.+ .+.++.-. ..| +|++++|| .+||++.
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~--v~~~i~vG-----------------~~P-~i~~spDg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGV--TLGHSLGA-----------------FLS-LAVAGHSGSDFALASTSFARSAK 91 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTE--EEEEEEEC-----------------TTC-EEEECTTSSCEEEEEEEETTTTS
T ss_pred CeEEEECCccCCccceEEEEECCCCe--EEEEEeCC-----------------CCC-ceEECCCCCEEEEEccccccccc
Confidence 57999998877 88999987532 22222211 238 99999998 5999984
Q ss_pred --CCCEEEEEc--CCC-cEEEe-CCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC-CCeEEE--EEcCC
Q 011333 162 --MNMAIRKIS--DSG-VTTIA-GGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-NRAIRE--IQLHF 230 (488)
Q Consensus 162 --~N~rIrkid--~gg-VttIa-Gg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-N~rIrk--I~~~g 230 (488)
..+.|.+|| .+. +.+|. ++... ......|.++++.++...|||++.+ .+.|.. ||+..
T Consensus 92 G~~~~~VsviD~~T~~vv~~I~v~~~~~-----------~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIADIELPDAPR-----------FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SSEEEEEEEECTTTCCEEEEEEETTSCS-----------CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCccc-----------cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 358899999 344 45553 21110 0112479999954444589999975 677888 87654
No 120
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.64 E-value=0.0053 Score=67.05 Aligned_cols=116 Identities=11% Similarity=0.094 Sum_probs=75.5
Q ss_pred CCceEEEEccCCc-EEEEECCCCeEEEEeCCCCcc---ccc---EEEecCCCCccccCCCcccccccCCcceEEEcCCCc
Q 011333 83 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLY---SRP---KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN 155 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~---g~i---~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~ 155 (488)
.+|+|+.++|||. +||++...++|.+|+...... +.+ ..+.... .. =..|.++++|++|+
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v--~v-----------G~gP~h~aF~~dG~ 343 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP--EL-----------GLGPLHTAFDGRGN 343 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC--BC-----------CSCEEEEEECTTSE
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc--CC-----------CCCcceEEECCCCe
Confidence 4899999999998 999999999999999873100 000 0011110 00 13599999999999
Q ss_pred EEEEECCCCEEEEEc-CC-----------C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-C
Q 011333 156 IYIADTMNMAIRKIS-DS-----------G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-R 221 (488)
Q Consensus 156 LYVAD~~N~rIrkid-~g-----------g-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN-~ 221 (488)
+|++-...+.|.+++ +. . +.++.-+ +..| ..+...++++..+...||+++.+. +
T Consensus 344 aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~-------yqpG-----h~~~~~g~t~~~DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 344 AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH-------YQPG-----HLKTVMGETLDATNDWLVCLSKFSKD 411 (595)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS-------SCEE-----EEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred EEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc-------cccc-----cceeccceEeCCCCCEEEEcCCCCcc
Confidence 999999999999999 33 1 2333221 1111 123345666333344799999887 7
Q ss_pred eE
Q 011333 222 AI 223 (488)
Q Consensus 222 rI 223 (488)
|+
T Consensus 412 r~ 413 (595)
T 1fwx_A 412 RF 413 (595)
T ss_dssp SS
T ss_pred cc
Confidence 77
No 121
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.54 E-value=0.033 Score=56.55 Aligned_cols=110 Identities=12% Similarity=0.031 Sum_probs=68.2
Q ss_pred cCCc-EEEEEC-CCC---eEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEECC---
Q 011333 92 PGGE-LLILDS-ANS---NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTM--- 162 (488)
Q Consensus 92 ~dG~-LYVaD~-~n~---rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~~--- 162 (488)
+++. +||+|. ..+ .|.+||..+. ++...+-. | ..| +|++++||. |||++..
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~---~~~~~i~~-----g-----------~~p-~i~~spDg~~lyv~n~~~~~ 89 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSG---SILGHVNG-----G-----------FLP-NPVAAHSGSEFALASTSFSR 89 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCC---eEEEEecC-----C-----------CCC-CeEECCCCCEEEEEeccccc
Confidence 4444 999997 444 8899998752 22111111 1 147 999999995 9999853
Q ss_pred ------CCEEEEEcCCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC-CCeEEEEEcCCCc
Q 011333 163 ------NMAIRKISDSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-NRAIREIQLHFDD 232 (488)
Q Consensus 163 ------N~rIrkid~gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-N~rIrkI~~~g~~ 232 (488)
.+.|.+||... +.++.-+.... ......|.++++.++...|||++.. .+.|..|+ ....
T Consensus 90 ~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~----------~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 90 IAKGKRTDYVEVFDPVTFLPIADIELPDAPR----------FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred cccCCCCCeEEEEECCCCcEEEEEECCCccc----------cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC
Confidence 46788898433 23332110000 0001468899955555679999875 68999999 6543
No 122
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.53 E-value=0.064 Score=55.48 Aligned_cols=113 Identities=9% Similarity=-0.043 Sum_probs=70.1
Q ss_pred CCceEEEEccCCc-EEEEEC---------CCCeEEEEeCCCCcccccEEE-ecCCCCccccCCCcccccccCCcceEEEc
Q 011333 83 IEPYSVEVLPGGE-LLILDS---------ANSNLYRISSSLSLYSRPKLV-AGSAEGYSGHVDGKPREARMNHPKGLTVD 151 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~---------~n~rI~kid~~g~~~g~i~tv-aG~~~G~~G~~dG~a~~a~Ln~P~GIAvD 151 (488)
..|+ |++++||. |||++. ..+.|.+||..+.. .+..+ ++. |... ..-..|.+++++
T Consensus 79 ~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~--v~~~I~v~~--g~r~--------~~g~~P~~~a~s 145 (386)
T 3sjl_D 79 FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--PTADIELPD--APRF--------LVGTYPWMTSLT 145 (386)
T ss_dssp SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--EEEEEEETT--CCCC--------CBSCCGGGEEEC
T ss_pred CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe--EEEEEECCC--cccc--------ccCCCCceEEEc
Confidence 3685 99999987 999984 24579999988632 12222 221 0000 012479999999
Q ss_pred CCCc-EEEEECC-CCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCe----eEEECCCCeEEEEECCC-C
Q 011333 152 DRGN-IYIADTM-NMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFD----VVYIGSSCSLLVIDRGN-R 221 (488)
Q Consensus 152 ~dG~-LYVAD~~-N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~g----Ia~vd~~G~LYVaD~gN-~ 221 (488)
+||. |||++.. .+.|..|| .+. +.+|.-.. + ....|.+ ++ +..+|.+++.|.+. +
T Consensus 146 pDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~----------~~~~P~g~~~~~~-~~~DG~~~~v~~~~~g 210 (386)
T 3sjl_D 146 PDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----C----------YHIFPTAPDTFFM-HCRDGSLAKVAFGTEG 210 (386)
T ss_dssp TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----E----------EEEEEEETTEEEE-EETTSCEEEEECCSSS
T ss_pred CCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----c----------ceeecCCCceeEE-ECCCCCEEEEECCCCC
Confidence 9995 9999974 78999999 344 45553210 0 0112433 24 55677777777764 5
Q ss_pred eE
Q 011333 222 AI 223 (488)
Q Consensus 222 rI 223 (488)
+|
T Consensus 211 ~v 212 (386)
T 3sjl_D 211 TP 212 (386)
T ss_dssp CC
T ss_pred eE
Confidence 55
No 123
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.51 E-value=0.0073 Score=61.93 Aligned_cols=114 Identities=6% Similarity=-0.103 Sum_probs=71.8
Q ss_pred CCceEEEEccCCc-EEEEEC---------CCCeEEEEeCCCCcccccEEE-ecCCCCccccCCCcccccccCCcceEEEc
Q 011333 83 IEPYSVEVLPGGE-LLILDS---------ANSNLYRISSSLSLYSRPKLV-AGSAEGYSGHVDGKPREARMNHPKGLTVD 151 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~---------~n~rI~kid~~g~~~g~i~tv-aG~~~G~~G~~dG~a~~a~Ln~P~GIAvD 151 (488)
..| ++++++||. |||++. ..+.|.+||..+.+ .+.++ +|.... ......|.+|+++
T Consensus 66 ~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--vv~~I~v~~~~~----------~~~g~~P~~ia~S 132 (368)
T 1mda_H 66 FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--PIADIELPDAPR----------FSVGPRVHIIGNC 132 (368)
T ss_dssp TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--EEEEEEETTSCS----------CCBSCCTTSEEEC
T ss_pred CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--EEEEEECCCccc----------cccCCCcceEEEc
Confidence 368 999999886 999984 35789999998643 23333 221000 0113579999999
Q ss_pred CCC-cEEEEECC-CCEEEE--EcCCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEE
Q 011333 152 DRG-NIYIADTM-NMAIRK--ISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQ 227 (488)
Q Consensus 152 ~dG-~LYVAD~~-N~rIrk--id~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~ 227 (488)
+|| .+||++.. ++.|.. ||...+.++.-+. + ..+ .+....+|++.+.++++..++
T Consensus 133 pDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~----~---------------~~~--~p~g~~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 133 ASSACLLFFLFGSSAAAGLSVPGASDDQLTKSAS----C---------------FHI--HPGAAATHYLGSCPASLAASD 191 (368)
T ss_dssp TTSSCEEEEECSSSCEEEEEETTTEEEEEEECSS----C---------------CCC--EEEETTEEECCCCTTSCEEEE
T ss_pred CCCCEEEEEccCCCCeEEEEEEchhhceEEECCC----c---------------eEE--ccCCCeEEEEEcCCCCEEEEE
Confidence 999 59999875 678888 8833355553210 0 111 233345666666667776676
Q ss_pred cCC
Q 011333 228 LHF 230 (488)
Q Consensus 228 ~~g 230 (488)
...
T Consensus 192 ~~~ 194 (368)
T 1mda_H 192 LAA 194 (368)
T ss_dssp CCS
T ss_pred Ccc
Confidence 653
No 124
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.50 E-value=0.075 Score=54.95 Aligned_cols=155 Identities=12% Similarity=0.083 Sum_probs=95.1
Q ss_pred CceEEEEc-c-------CCcEEEEECCCCeEEEEeCCCCcccccEEEecC-CCCcc-c--cCCCcccccccCCcceEEEc
Q 011333 84 EPYSVEVL-P-------GGELLILDSANSNLYRISSSLSLYSRPKLVAGS-AEGYS-G--HVDGKPREARMNHPKGLTVD 151 (488)
Q Consensus 84 ~P~GIaVd-~-------dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~-~~G~~-G--~~dG~a~~a~Ln~P~GIAvD 151 (488)
.-..|+|| . ++.+||+|.+...|.++|...+. ...+... ..-.. + ..+|.... ....-.|||++
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~---swRv~~~~~~pd~~~~~~i~G~~~~-~~~Gi~gIaLs 228 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQD---SWNVTHPTFKAERPTKFDYGGKEYE-FKAGIFGITLG 228 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTE---EEEEECGGGSCCSCEEEEETTEEEE-ECCCEEEEEEC
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCc---EEEEccCCCccccCcceEECCEEeE-eccCceEEEec
Confidence 45688998 2 45699999999999999988643 2223321 10000 0 01221110 01366799999
Q ss_pred CC----C-cEEEEECCCCEEEEEc-----CCC----cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEEC-CCCeEEEE
Q 011333 152 DR----G-NIYIADTMNMAIRKIS-----DSG----VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIG-SSCSLLVI 216 (488)
Q Consensus 152 ~d----G-~LYVAD~~N~rIrkid-----~gg----VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd-~~G~LYVa 216 (488)
++ + .||+.--.+.++..+. +.. |..+ |.. + + .....+++ .| .+|+||++
T Consensus 229 p~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~k-g--------~-----~s~~~~~~-~D~~~G~ly~~ 292 (381)
T 3q6k_A 229 DRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNR-G--------K-----YNDAIALA-YDPKTKVIFFA 292 (381)
T ss_dssp CCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EEC-C--------T-----TCCEEEEE-ECTTTCEEEEE
T ss_pred CCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eec-C--------C-----CCCcceEE-EeCCCCeEEEE
Confidence 86 3 5999999888999887 221 2222 111 0 0 01123455 55 89999999
Q ss_pred ECCCCeEEEEEcCC-Cc-------eEEeccCCCcceEEEEecCCceEEEEEEEE
Q 011333 217 DRGNRAIREIQLHF-DD-------CAYQYGSSFPLGIAVLLAAGFFGYMLALLQ 262 (488)
Q Consensus 217 D~gN~rIrkI~~~g-~~-------~~~~~~~g~P~GIav~~g~g~~Gy~~a~l~ 262 (488)
+..++.|.+++.++ .- ........+|++++++. -|+++.+..
T Consensus 293 ~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~----~g~Lwv~sn 342 (381)
T 3q6k_A 293 EANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS----KGGLWFMSN 342 (381)
T ss_dssp ESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT----TSCEEEEEC
T ss_pred eccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECC----CCeEEEEEC
Confidence 99999999999987 21 22234556899999873 345655543
No 125
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.23 E-value=0.078 Score=56.19 Aligned_cols=31 Identities=13% Similarity=-0.006 Sum_probs=26.2
Q ss_pred CCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 199 SNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 199 ~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
..|.+|.+..+...|||++++.+.|..++..
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 4689999655556799999999999999975
No 126
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.20 E-value=0.027 Score=60.83 Aligned_cols=103 Identities=10% Similarity=-0.073 Sum_probs=72.4
Q ss_pred EccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEECCCCEEEE
Q 011333 90 VLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTMNMAIRK 168 (488)
Q Consensus 90 Vd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~~N~rIrk 168 (488)
.|+.+.+||++...+.|..||..+. ++...+.. -..|.++++++||+ +||++. .+.|.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~---~v~~~i~~----------------g~~p~~v~~SpDGr~lyv~~~-dg~V~v 222 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTY---EIKTVLDT----------------GYAVHISRLSASGRYLFVIGR-DGKVNM 222 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTC---CEEEEEEC----------------SSCEEEEEECTTSCEEEEEET-TSEEEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCC---eEEEEEeC----------------CCCccceEECCCCCEEEEEcC-CCeEEE
Confidence 4556779999999999999998863 22222221 12478999999996 899985 568999
Q ss_pred EcCC--C---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEEC----CCCeEEEEECCCCeEEEEEcCC
Q 011333 169 ISDS--G---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIG----SSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 169 id~g--g---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd----~~G~LYVaD~gN~rIrkI~~~g 230 (488)
||.. . +.++..+ ..|.+|++.. +...|||++...+.|..|+...
T Consensus 223 iD~~~~t~~~v~~i~~G------------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 223 IDLWMKEPTTVAEIKIG------------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EETTSSSCCEEEEEECC------------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred EECCCCCCcEeEEEecC------------------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 9942 3 3333321 1588999541 3448999999999999998654
No 127
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.19 E-value=0.082 Score=56.02 Aligned_cols=142 Identities=10% Similarity=0.018 Sum_probs=77.0
Q ss_pred CceEEEE--ccCCc-EEEEEC-----CCCeEEEEeCCCCcccccEEE-ecCCCCccccCC-C-cccccccCCcceEEEcC
Q 011333 84 EPYSVEV--LPGGE-LLILDS-----ANSNLYRISSSLSLYSRPKLV-AGSAEGYSGHVD-G-KPREARMNHPKGLTVDD 152 (488)
Q Consensus 84 ~P~GIaV--d~dG~-LYVaD~-----~n~rI~kid~~g~~~g~i~tv-aG~~~G~~G~~d-G-~a~~a~Ln~P~GIAvD~ 152 (488)
.|.+|.+ +++|. +||+.. .++.|.++..+.+......++ +... ...+... - ....+.-+.|.+|.+++
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~-~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAE-PLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCE-ECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCc-cccccccccccccccCCCceeEEEECC
Confidence 5778877 88886 888887 778887766553221111111 0110 0000000 0 00000025699999999
Q ss_pred CCc-EEEEECCCCEEEEEc-C-C-CcE---EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEE--------
Q 011333 153 RGN-IYIADTMNMAIRKIS-D-S-GVT---TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVID-------- 217 (488)
Q Consensus 153 dG~-LYVAD~~N~rIrkid-~-g-gVt---tIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD-------- 217 (488)
||+ |||++++.+.|..|+ . . ..+ .+.-++.........|. ..-..|.++++..+...|||++
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~---~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~ 407 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGH---KLTGAPQMLEISRDGRRVYVTNSLYSTWDN 407 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSC---CCCSCCCCEEECTTSSEEEEECCCCHHHHH
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccc---cCCCCCCEEEEcCCCCEEEEEcCCcccccc
Confidence 995 999999999999998 2 2 222 22211100000000010 0123699999544455799999
Q ss_pred C-----CCCeEEEEEcC
Q 011333 218 R-----GNRAIREIQLH 229 (488)
Q Consensus 218 ~-----gN~rIrkI~~~ 229 (488)
. .+..+.+++.+
T Consensus 408 Qfyp~~~~~~~~~~~vd 424 (462)
T 2ece_A 408 QFYPEGLKGWMVKLNAN 424 (462)
T ss_dssp HHSTTCCCCEEEEEEEC
T ss_pred cccCCCCceEEEEEEec
Confidence 3 45677766555
No 128
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.14 E-value=0.037 Score=57.25 Aligned_cols=105 Identities=14% Similarity=0.243 Sum_probs=72.4
Q ss_pred CCceEEEEccC----C-cEEEEECCCCeEEEEeCC----CCcccccEEEecCCCCccccCCCcccccccCCcceEEEc-C
Q 011333 83 IEPYSVEVLPG----G-ELLILDSANSNLYRISSS----LSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVD-D 152 (488)
Q Consensus 83 ~~P~GIaVd~d----G-~LYVaD~~n~rI~kid~~----g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD-~ 152 (488)
..-.||+++++ + .||++-..+.+++++... ......+.. .|. .|. .....++++| .
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~-~G~----kg~---------~s~~~~~~~D~~ 285 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPEL-LGN----RGK---------YNDAIALAYDPK 285 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEE-EEE----CCT---------TCCEEEEEECTT
T ss_pred cCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEE-eee----cCC---------CCCcceEEEeCC
Confidence 35679999886 3 499999888899999632 111112222 221 110 1223468897 7
Q ss_pred CCcEEEEECCCCEEEEEc-CC------CcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEE
Q 011333 153 RGNIYIADTMNMAIRKIS-DS------GVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVID 217 (488)
Q Consensus 153 dG~LYVAD~~N~rIrkid-~g------gVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD 217 (488)
+|+||+++..++.|.+++ ++ .+.+++-. ..|.+|.++. ++.+|.|||.-
T Consensus 286 ~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d---------------~~l~~pd~~~-i~~~g~Lwv~s 341 (381)
T 3q6k_A 286 TKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTS---------------SRFVFGTDIS-VDSKGGLWFMS 341 (381)
T ss_dssp TCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEEC---------------TTCCSEEEEE-ECTTSCEEEEE
T ss_pred CCeEEEEeccCCeEEEEeCCCCccccCceEEEEEC---------------CCccccCeEE-ECCCCeEEEEE
Confidence 999999999999999999 43 24555532 2588999999 78999999986
No 129
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.13 E-value=0.036 Score=60.55 Aligned_cols=72 Identities=8% Similarity=0.134 Sum_probs=56.3
Q ss_pred CCcceEEEcCCCc-EEEEECCCCEEEEEcCCCcE------------EEeCCccCCCCCCCCCCcccccCCCCCeeEEECC
Q 011333 143 NHPKGLTVDDRGN-IYIADTMNMAIRKISDSGVT------------TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS 209 (488)
Q Consensus 143 n~P~GIAvD~dG~-LYVAD~~N~rIrkid~ggVt------------tIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~ 209 (488)
+.|.||.+++||. +||++...++|.+|+-.... .++--..| ..|.+++ ++.
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG---------------~gP~h~a-F~~ 340 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG---------------LGPLHTA-FDG 340 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC---------------SCEEEEE-ECT
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC---------------CCcceEE-ECC
Confidence 6899999999996 99999999999999933221 11111111 3799999 688
Q ss_pred CCeEEEEECCCCeEEEEEcCC
Q 011333 210 SCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 210 ~G~LYVaD~gN~rIrkI~~~g 230 (488)
+|++|++..-.+.|.+++.+.
T Consensus 341 dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 341 RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TSEEEEEETTTTEEEEEEHHH
T ss_pred CCeEEEEEecCCcEEEEEhhH
Confidence 889999999999999999764
No 130
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.98 E-value=0.048 Score=54.57 Aligned_cols=109 Identities=12% Similarity=0.054 Sum_probs=68.3
Q ss_pred CcEEEEECC-----CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEEC------
Q 011333 94 GELLILDSA-----NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT------ 161 (488)
Q Consensus 94 G~LYVaD~~-----n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~------ 161 (488)
..+||+|.+ .+.|+++|...+. .+.++... ..| +|+++++|. |||++.
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~--~~~~i~~g-----------------~~p-~i~~spdg~~lyv~~~~~~~~~ 75 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGK--FLGMVPTA-----------------FNG-HVQVSNDGKKIYTMTTYHERIT 75 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCC--EEEEEECC-----------------EEE-EEEECTTSSEEEEEEEEETTSS
T ss_pred CEEEEECCCCCccccCeEEEEECCCCe--EEEEecCC-----------------CCC-ceEECCCCCEEEEEEecccccc
Confidence 359999864 3589999976522 12222110 137 999999995 999974
Q ss_pred ---CCCEEEEEcC--CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC-CCeEEEEEcCCCce
Q 011333 162 ---MNMAIRKISD--SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-NRAIREIQLHFDDC 233 (488)
Q Consensus 162 ---~N~rIrkid~--gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-N~rIrkI~~~g~~~ 233 (488)
..+.|..||. .. +.++...... ...-..|.+|++.++...|||++.+ .+.|..|+......
T Consensus 76 ~g~~~~~v~v~d~~t~~~~~~i~~~~~~-----------~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 76 RGKRSDVVEVWDADKLTFEKEISLPPKR-----------VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY 143 (361)
T ss_dssp SSCEEEEEEEEETTTCCEEEEEEECTTB-----------CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE
T ss_pred cCCCCCEEEEEECcCCcEEEEEEcCccc-----------cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE
Confidence 2356999983 23 3444321100 0012479999954444479999976 68999999876543
No 131
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.91 E-value=0.029 Score=55.79 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=69.8
Q ss_pred EEEEccC-CcEEEEE---CCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC-CcEEEEEC
Q 011333 87 SVEVLPG-GELLILD---SANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIADT 161 (488)
Q Consensus 87 GIaVd~d-G~LYVaD---~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d-G~LYVAD~ 161 (488)
+.++.++ +.||++| .++..|++++.+|. ....+.... . ++++.+ +.||++|.
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs---~~~~lt~~~---------------~-----~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE---EKKKIKNHY---------------L-----FTCNTSDRYFYYNNP 164 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSC---CCEEEESSC---------------C-----CCSEEETTEEEEECT
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCC---CeEEEeCCC---------------c-----eEeeEECCEEEEEeC
Confidence 3455554 4599999 67889999999973 334443320 0 123343 47999998
Q ss_pred CCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-CeEEEEEcCCCceEEe
Q 011333 162 MNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-RAIREIQLHFDDCAYQ 236 (488)
Q Consensus 162 ~N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN-~rIrkI~~~g~~~~~~ 236 (488)
+..+|.+++ +|+ ..++..+ +..+++++..+.||.+|... .+|.+++++|......
T Consensus 165 g~~~Iy~~~l~g~~~~~l~~~--------------------~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~L 222 (302)
T 3s25_A 165 KNGQLYRYDTASQSEALFYDC--------------------NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVL 222 (302)
T ss_dssp TTCCEEEEETTTTEEEEEECS--------------------CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEEC
T ss_pred CCceEEEEECCCCCEEEEeCC--------------------CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEE
Confidence 889999998 555 4444321 11123345688999999754 6899999998665543
No 132
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.89 E-value=0.098 Score=55.22 Aligned_cols=75 Identities=11% Similarity=0.013 Sum_probs=46.7
Q ss_pred CCcceEEEcC-------CCcEEEEECCCCEEEEEc--CCC-c---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC
Q 011333 143 NHPKGLTVDD-------RGNIYIADTMNMAIRKIS--DSG-V---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS 209 (488)
Q Consensus 143 n~P~GIAvD~-------dG~LYVAD~~N~rIrkid--~gg-V---ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~ 209 (488)
..|.|++|-. .|.++|+|.. .+|.++. .++ + ..+..+.... ........|.+|+ +++
T Consensus 276 ~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~~--------~~~~~~~r~~~v~-~~p 345 (463)
T 2wg3_C 276 GPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSGS--------CRGYFSGHILGFG-EDE 345 (463)
T ss_dssp -CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-----CCEEEEECEEETTS--------SCSCCCSEEEEEE-ECT
T ss_pred ccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCCceeeEEEeecCCccc--------ccccccCcceEEE-ECC
Confidence 3678888852 4569999986 6788776 222 1 1221110000 0011234689999 899
Q ss_pred CCeEEEEEC-------CCCeEEEEE
Q 011333 210 SCSLLVIDR-------GNRAIREIQ 227 (488)
Q Consensus 210 ~G~LYVaD~-------gN~rIrkI~ 227 (488)
+|.|||+|. .+++|+||.
T Consensus 346 dG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 346 LGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp TCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred CCCEEEEeccCCcccCCCCcEEEec
Confidence 999999997 578999997
No 133
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.89 E-value=0.084 Score=50.27 Aligned_cols=69 Identities=14% Similarity=0.185 Sum_probs=45.4
Q ss_pred CcceEEEcCCCcEEEEECCCCEEEEEcC-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCC
Q 011333 144 HPKGLTVDDRGNIYIADTMNMAIRKISD-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNR 221 (488)
Q Consensus 144 ~P~GIAvD~dG~LYVAD~~N~rIrkid~-ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~ 221 (488)
....+++|++|+|||+.. ++.|.+++. +.. ..+.... ..+..++ ++.+|+|||+.. ++
T Consensus 216 ~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~~-----------------~~~~~~~-~~~~g~l~v~t~-~g 275 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTSL-DGHLYAINPDGTEKWRFKTGK-----------------RIESSPV-IGNTDTIYFGSY-DG 275 (330)
T ss_dssp CCSCCEECTTSCEEEEET-TTEEEEECTTSCEEEEEECSS-----------------CCCSCCE-ECTTSCEEEECT-TC
T ss_pred ceeceEECCCCeEEEEcC-CCeEEEECCCCCEeEEeeCCC-----------------Cccccce-EcCCCeEEEecC-CC
Confidence 356789999999999975 567888883 443 2222110 0123455 677899999864 46
Q ss_pred eEEEEEcCCCc
Q 011333 222 AIREIQLHFDD 232 (488)
Q Consensus 222 rIrkI~~~g~~ 232 (488)
.|.+++..+..
T Consensus 276 gl~~~d~~g~~ 286 (330)
T 3hxj_A 276 HLYAINPDGTE 286 (330)
T ss_dssp EEEEECTTSCE
T ss_pred CEEEECCCCcE
Confidence 89999876543
No 134
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.49 E-value=0.26 Score=50.87 Aligned_cols=112 Identities=9% Similarity=0.131 Sum_probs=74.6
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
..++++.+|+.++++-..++.|+.++.++ ..+..+.+. -.....|+++++|.++++=....
T Consensus 429 v~~~~~s~d~~~l~~~~~d~~v~~w~~~~---~~~~~~~~~----------------~~~v~~~~~spd~~~las~~~d~ 489 (577)
T 2ymu_A 429 VWGVAFSPDDQTIASASDDKTVKLWNRNG---QLLQTLTGH----------------SSSVRGVAFSPDGQTIASASDDK 489 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTS---CEEEEEECC----------------SSCEEEEEECTTSCEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCC---CEEEEEcCC----------------CCCEEEEEEcCCCCEEEEEeCCC
Confidence 46788888888777766777888888765 233344332 12356799999999888766788
Q ss_pred EEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 165 AIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 165 rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
.|+.++ ++. +.++.+.. ....+|+ +.++|.++++-...+.|+.++..+...
T Consensus 490 ~i~iw~~~~~~~~~~~~h~-----------------~~v~~l~-~s~dg~~l~s~~~dg~v~lwd~~~~~~ 542 (577)
T 2ymu_A 490 TVKLWNRNGQLLQTLTGHS-----------------SSVRGVA-FSPDGQTIASASDDKTVKLWNRNGQLL 542 (577)
T ss_dssp EEEEEETTSCEEEEEECCS-----------------SCEEEEE-ECTTSSCEEEEETTSEEEEECTTSCEE
T ss_pred EEEEEcCCCCEEEEEeCCC-----------------CCEEEEE-EcCCCCEEEEEECcCEEEEEeCCCCEE
Confidence 899998 554 44444321 1345777 466677666666677888888765433
No 135
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.39 E-value=0.58 Score=48.21 Aligned_cols=109 Identities=10% Similarity=0.139 Sum_probs=71.2
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..|+++|||.++++-..++.|+.++.++ ..+.++.|.. ..-..|++.++|++.++=...+
T Consensus 19 V~~~a~spdg~~las~~~d~~v~iWd~~~---~~~~~l~gh~----------------~~V~~l~fspdg~~las~~~d~ 79 (577)
T 2ymu_A 19 VRGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHS----------------SSVWGVAFSPDGQTIASASDDK 79 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECTTS---CEEEEEECCS----------------SCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCC---CEEEEEeCCC----------------CCEEEEEECCCCCEEEEEeCCC
Confidence 36889999999877766778999999775 2344554431 1245799999998777666678
Q ss_pred EEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 165 AIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 165 rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
.|+..+ ++. +.++.+.. ....+|+ +.+++..+++-...+.++.++...
T Consensus 80 ~i~vWd~~~~~~~~~~~~~-----------------~~v~~~~-~s~d~~~l~~~~~d~~~~~~~~~~ 129 (577)
T 2ymu_A 80 TVKLWNRNGQLLQTLTGHS-----------------SSVRGVA-FSPDGQTIASASDDKTVKLWNRNG 129 (577)
T ss_dssp CEEEEETTSCEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTC
T ss_pred EEEEEECCCCEEEEEECCC-----------------CCEEEEE-ECCCCCEEEEEcCCCceeeccccc
Confidence 899998 444 34443211 1235666 455666666555566666666554
No 136
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.38 E-value=0.22 Score=47.26 Aligned_cols=106 Identities=11% Similarity=0.041 Sum_probs=59.9
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
...++++++|.||++.. ++.|++++.++. .+..+... -..+..+++|++|+|||+.. ++
T Consensus 217 ~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~---~~~~~~~~----------------~~~~~~~~~~~~g~l~v~t~-~g 275 (330)
T 3hxj_A 217 VTRPAISEDGTIYVTSL-DGHLYAINPDGT---EKWRFKTG----------------KRIESSPVIGNTDTIYFGSY-DG 275 (330)
T ss_dssp CSCCEECTTSCEEEEET-TTEEEEECTTSC---EEEEEECS----------------SCCCSCCEECTTSCEEEECT-TC
T ss_pred eeceEECCCCeEEEEcC-CCeEEEECCCCC---EeEEeeCC----------------CCccccceEcCCCeEEEecC-CC
Confidence 34556666667777654 346666665532 11111100 01234578888999999985 45
Q ss_pred EEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 165 AIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 165 rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
.|.+++ ++.......... .....++ .+.+|+|||+.. ++.|......
T Consensus 276 gl~~~d~~g~~~~~~~~~~----------------~~~~~~~-~d~~g~l~~gt~-~G~~~~~~~~ 323 (330)
T 3hxj_A 276 HLYAINPDGTEKWNFETGS----------------WIIATPV-IDENGTIYFGTR-NGKFYALFNL 323 (330)
T ss_dssp EEEEECTTSCEEEEEECSS----------------CCCSCCE-ECTTCCEEEECT-TSCEEEEEC-
T ss_pred CEEEECCCCcEEEEEEcCC----------------ccccceE-EcCCCEEEEEcC-CCeEEEEecc
Confidence 899998 444322221110 1234555 788999999754 5666666544
No 137
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.28 E-value=1.2 Score=41.48 Aligned_cols=114 Identities=6% Similarity=-0.005 Sum_probs=72.2
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....++++++|.++++-..++.|+.++.... +....... -.....++++++|.++++-..+
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~---~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDNTVRSWDLREG---RQLQQHDF----------------TSQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTT---EEEEEEEC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEECCCC---ceEeeecC----------------CCceEEEEECCCCCEEEEEcCC
Confidence 4567778888876666656778888887642 22221111 1235678999999877776667
Q ss_pred CEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 011333 164 MAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 164 ~rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~ 234 (488)
+.|+.++ . +....+.+. -....+++ ..+++.++++-..++.|+.++.......
T Consensus 246 ~~i~~~~~~~~~~~~~~~~-----------------~~~v~~~~-~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 246 SNVEVLHVNKPDKYQLHLH-----------------ESCVLSLK-FAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp SCEEEEETTSSCEEEECCC-----------------SSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CcEEEEECCCCCeEEEcCC-----------------ccceeEEE-ECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 8889888 3 334333221 12346777 5667777777667888988887754443
No 138
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.26 E-value=0.31 Score=45.77 Aligned_cols=108 Identities=12% Similarity=0.107 Sum_probs=66.6
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....++++++|.++++-..++.|+.++.... ....+.+. -.....++++++|.++++-..+
T Consensus 226 ~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~---~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKP---DKYQLHLH----------------ESCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSS---CEEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCC---CeEEEcCC----------------ccceeEEEECCCCCEEEEecCC
Confidence 3566777777776666555667777776642 22222111 2346789999999877777778
Q ss_pred CEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEc
Q 011333 164 MAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQL 228 (488)
Q Consensus 164 ~rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~ 228 (488)
+.|+.++ . +........ -....+++ +.+++.++++-..++.|+.+++
T Consensus 287 g~i~~~~~~~~~~~~~~~~-----------------~~~v~~~~-~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 287 NLLNAWRTPYGASIFQSKE-----------------SSSVLSCD-ISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SEEEEEETTTCCEEEEEEC-----------------SSCEEEEE-ECTTSCEEEEEETTSCEEEEEE
T ss_pred CcEEEEECCCCeEEEEecC-----------------CCcEEEEE-ECCCCCEEEEecCCCeEEEEEE
Confidence 8999998 3 333222111 11346777 5666766666666777877764
No 139
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.22 E-value=0.15 Score=56.34 Aligned_cols=113 Identities=8% Similarity=-0.006 Sum_probs=68.2
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.-..|+.|++|.|||.-. +.+.+++... ++...+.... ... ...-..|+.|++|+|||+-.
T Consensus 89 ~I~~i~~d~~g~lWigT~--~Gl~~yd~~~---~~f~~~~~~~-------~~~-----~~~i~~i~~d~~g~lwi~t~-- 149 (795)
T 4a2l_A 89 ISRIVKTDSQGRVWIGTR--DGLSRYDEEK---DIFQNFFYEK-------NGK-----HLQVNGIEEISPEQLLISTP-- 149 (795)
T ss_dssp CEEEEEECTTSCEEEEES--SCEEEEETTT---TEEEEECCEE-------TTE-----ECCCCEEEEEETTEEEEEET--
T ss_pred ceeEEEECCCCCEEEEeC--CchheeCCCC---CeEEeccccc-------cCC-----CceEEEEEECCCCCEEEEEC--
Confidence 456788899999999875 4589999864 2333332110 000 01156799999999999974
Q ss_pred CEEEEEcCC-C-cEEEeCCccCCCCCCCCCCcccccCCC-CCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 164 MAIRKISDS-G-VTTIAGGKWGRGGGHVDGPSEDAKFSN-DFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 164 ~rIrkid~g-g-VttIaGg~~g~~~g~~dG~~~~a~f~~-P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
+.|.+++.. + +..+... . .... ...|+ .+.+|.|||+-. ++.|.+++.....
T Consensus 150 ~gl~~~~~~~~~~~~~~~~-----------~----~~~~~i~~i~-~d~~g~lwigt~-~~Gl~~~~~~~~~ 204 (795)
T 4a2l_A 150 EGLIMFDIKESKFIDDSFS-----------T----AMHKTIASTL-YRQGDQIYIGTS-TDGLYTYSITQKT 204 (795)
T ss_dssp TEEEEEETTTTEEECSSSC-----------H----HHHTCCEEEE-EEETTEEEEEES-SSCEEEEETTTCC
T ss_pred CceEEEECCCCEEEeccCC-----------C----CCCcceEEEE-ECCCCCEEEEEC-CCCEEEEeCCCCe
Confidence 668888832 2 3221100 0 0011 34565 677889999754 3347777765443
No 140
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.05 E-value=0.62 Score=45.13 Aligned_cols=114 Identities=12% Similarity=0.177 Sum_probs=76.1
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
...++++++|.++++-..++.|+.++...+. .+.++.+. -...+.|+++++|.++++=...+
T Consensus 167 v~~~~~spdg~~lasg~~dg~i~iwd~~~~~--~~~~~~~h----------------~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGAIDGIINIFDIATGK--LLHTLEGH----------------AMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCCCEEEECTTSCEEEEECTTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEEEccc----------------CCceeEEEEcCCCCEEEEEcCCC
Confidence 4678888999887777777889999876521 22223221 11246799999999888777788
Q ss_pred EEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 011333 165 AIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 165 rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~ 234 (488)
.|+.++ .+. +.++.+.. ....+++ +.+++.++++-...+.|+.+++....+.
T Consensus 229 ~i~iwd~~~~~~~~~~~~h~-----------------~~v~~~~-~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLSGHA-----------------SWVLNVA-FCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp CEEEEETTTCCEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEECCCcceeEEEcCCC-----------------CceEEEE-ECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 899998 333 33333211 1245777 5667777777777888999988765554
No 141
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.72 E-value=0.21 Score=49.54 Aligned_cols=104 Identities=11% Similarity=0.158 Sum_probs=67.6
Q ss_pred EEEccCCcEEEEEC-CCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC----
Q 011333 88 VEVLPGGELLILDS-ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM---- 162 (488)
Q Consensus 88 IaVd~dG~LYVaD~-~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~---- 162 (488)
.++..++.||+++. .+++|++++.+|. .+..+... .+..|.++ .+.||.++..
T Consensus 20 ~~~~~g~~iy~~n~~d~~~ly~~~~dg~---~~~~l~~~------------------~~~~i~~~-g~~Iyy~~~~~~~~ 77 (302)
T 3s25_A 20 LFCESDGEVFFSNTNDNGRLYAMNIDGS---NIHKLSND------------------TAMYINAD-KNYVYYVRNNNQKI 77 (302)
T ss_dssp CEEEETTEEEEEEGGGTTEEEEEETTSC---SCEEEEEE------------------EEEEEEEC-SSEEEEEEECC---
T ss_pred EEEEeCCEEEEEeCCCCceEEEEcCCCC---CCEEccCC------------------ceeeEEEc-CCEEEEEECCCCcc
Confidence 33445778999974 3689999999973 34444321 14557766 4568887653
Q ss_pred ---------CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEE---CCCCeEEEEEc
Q 011333 163 ---------NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVID---RGNRAIREIQL 228 (488)
Q Consensus 163 ---------N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD---~gN~rIrkI~~ 228 (488)
.+.|++++ +++ .+.+.... + ..++ ...+.||++| .++..|+++++
T Consensus 78 ~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~-~------------------~~~s--~~g~~Iy~~~~~~~~~~~Iy~~~~ 136 (302)
T 3s25_A 78 TSQTFFSYDRNSLCRIKRNGHGSTVLDPDP-C------------------IYAS--LIGNYIYYLHYDTQTATSLYRIRI 136 (302)
T ss_dssp ---CCSSCCSEEEEEEETTSCCCEEEECSC-E------------------EEEE--EETTEEEEEEESSSSCEEEEEEET
T ss_pred cccceeccCCCeEEEEeCCCCcceEeecCC-c------------------cEEE--EeCCEEEEEeecCCCCceEEEEEC
Confidence 36899999 555 34443210 0 1233 3567999999 78899999999
Q ss_pred CCCceE
Q 011333 229 HFDDCA 234 (488)
Q Consensus 229 ~g~~~~ 234 (488)
+|....
T Consensus 137 dGs~~~ 142 (302)
T 3s25_A 137 DGEEKK 142 (302)
T ss_dssp TSCCCE
T ss_pred CCCCeE
Confidence 985443
No 142
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.71 E-value=0.55 Score=45.42 Aligned_cols=111 Identities=21% Similarity=0.181 Sum_probs=68.4
Q ss_pred eEEEEccCCcEEEEECCCCeEEEEeCCCCccccc---EEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 86 YSVEVLPGGELLILDSANSNLYRISSSLSLYSRP---KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 86 ~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i---~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
..+.+|++|.||++ .+++|+|+++.......+ .+.+|. .|. +.=.-|+++++|+||.++
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~----~gw----------~~~~~lff~p~G~Lyav~-- 152 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGS----GGW----------SGFKFLFFHPNGYLYAVH-- 152 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEEC----SSG----------GGEEEEEECTTSCEEEEE--
T ss_pred eEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEecc----CCC----------CceEEEEECCCceEEEEe--
Confidence 36889999999999 348999999842110111 122222 121 112679999999999999
Q ss_pred CCEEEEEc-C--CC------cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 163 NMAIRKIS-D--SG------VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 163 N~rIrkid-~--gg------VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
+.++.+-. . .+ .+++..+.+.. + .-++ .+.+|.||.+. +++|.+.......|
T Consensus 153 dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~-------------y---r~l~-f~~~G~l~~v~--~g~~Y~~~~p~~~~ 213 (236)
T 1tl2_A 153 GQQFYKALPPVSNQDNWLARATKIGQGGWDT-------------F---KFLF-FSSVGTLFGVQ--GGKFYEDYPPSYAY 213 (236)
T ss_dssp TTEEEEECCCSSTTCCHHHHCEEEESSSGGG-------------E---EEEE-ECTTSCEEEEE--TTEEEEESCCCSTT
T ss_pred CCcEEecCCCCCCCcccccccceeccCCcce-------------E---EEEE-ECCCCcEEEEe--CCeEEecCCccccC
Confidence 55576544 2 11 22332122211 1 1244 78999999999 78999997664433
No 143
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.62 E-value=1.4 Score=43.36 Aligned_cols=121 Identities=10% Similarity=0.017 Sum_probs=79.9
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..|++.|+|.++++-...+.|+.++...+. .+.++.... . . ..........+++.++|.++++-..++
T Consensus 252 v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~--~~~~~~~~~-~---~-----~~~~~~~v~~~~~s~~g~~l~~g~~dg 320 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDGTCRLFDMRTGH--QLQVYNREP-D---R-----NDNELPIVTSVAFSISGRLLFAGYSNG 320 (380)
T ss_dssp CCEEEECTTSSEEEEECSSSCEEEEETTTTE--EEEEECCCC-S---S-----SCCSSCSCSEEEECSSSSEEEEECTTS
T ss_pred eEEEEEecCCCeEEEEcCCCeEEEEECCCCc--EEEEecccc-c---c-----cccccCceEEEEECCCCCEEEEEECCC
Confidence 4688999999998888888899999987521 222332211 0 0 001123357899999999998888889
Q ss_pred EEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 165 AIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 165 rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
.|+.++ .+. +..+..... ..-..-.+|+ +.++|.++++-...+.|+.++..+
T Consensus 321 ~i~vwd~~~~~~~~~~~~~~~-------------~h~~~v~~l~-~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 321 DCYVWDTLLAEMVLNLGTLQN-------------SHEGRISCLG-LSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CEEEEETTTCCEEEEECCSCS-------------SCCCCCCEEE-ECSSSSEEEEECTTSCEEEEECCS
T ss_pred CEEEEECCCCceEEEEecccC-------------CCCCceEEEE-ECCCCCEEEEeeCCCCEEEEecCC
Confidence 999998 333 333321100 0112346788 677888888888888898888764
No 144
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.62 E-value=0.45 Score=48.73 Aligned_cols=75 Identities=13% Similarity=0.137 Sum_probs=52.5
Q ss_pred CCCCceEEEEcc-CCcEEEEECCCCeEEEEeCC--CCcccccEEEecCCCCccccCCCcccccccC-CcceEEEc--CC-
Q 011333 81 LGIEPYSVEVLP-GGELLILDSANSNLYRISSS--LSLYSRPKLVAGSAEGYSGHVDGKPREARMN-HPKGLTVD--DR- 153 (488)
Q Consensus 81 ~l~~P~GIaVd~-dG~LYVaD~~n~rI~kid~~--g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln-~P~GIAvD--~d- 153 (488)
+..+|.|+++|+ .|.|||++-.. .|++++.+ ++..+++...++. | .|. .+.||++. ++
T Consensus 178 lgsq~EgcvvDd~~g~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~~~~-----g---------~l~aDvEGLai~~~~~g 242 (355)
T 3amr_A 178 MNSQTEGMAADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADG-----R---------HLTRDIEGLTIYYAADG 242 (355)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTT-EEEEEECSTTSCSCCEEEEEBSS-----S---------SBCSCEEEEEEEECGGG
T ss_pred CCCCcceEEEcCCCCeEEEecccc-eEEEEeCCcCCCCCceEEEEecC-----C---------ccccCcceEEEEecCCC
Confidence 345899999997 68899999875 59999954 3211222222221 0 143 69999995 33
Q ss_pred -CcEEEEECCCCEEEEEc
Q 011333 154 -GNIYIADTMNMAIRKIS 170 (488)
Q Consensus 154 -G~LYVAD~~N~rIrkid 170 (488)
|.|++++.+++....|+
T Consensus 243 ~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 243 KGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp CEEEEEEEGGGTEEEEEE
T ss_pred CEEEEEEcCCCCEEEEEE
Confidence 45999999999999998
No 145
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.58 E-value=0.52 Score=45.70 Aligned_cols=108 Identities=11% Similarity=0.115 Sum_probs=71.6
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
...++++++|.++++-...+.|+.++..... .+.++.|. -.....|++.++|.++++=...+
T Consensus 209 v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~h----------------~~~v~~~~~sp~~~~l~s~s~D~ 270 (321)
T 3ow8_A 209 IRSLTFSPDSQLLVTASDDGYIKIYDVQHAN--LAGTLSGH----------------ASWVLNVAFCPDDTHFVSSSSDK 270 (321)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEETTTCC--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred eeEEEEcCCCCEEEEEcCCCeEEEEECCCcc--eeEEEcCC----------------CCceEEEEECCCCCEEEEEeCCC
Confidence 4678888888888877777888888876421 22233221 12356799999998888777788
Q ss_pred EEEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEc
Q 011333 165 AIRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQL 228 (488)
Q Consensus 165 rIrkid-~-gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~ 228 (488)
.|+.++ . +. +.++.+.. ...++|+ ..+++..+++-...+.|+.++.
T Consensus 271 ~v~iwd~~~~~~~~~~~~h~-----------------~~v~~v~-~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 271 SVKVWDVGTRTCVHTFFDHQ-----------------DQVWGVK-YNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CEEEEETTTTEEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTCCEEEEEC
T ss_pred cEEEEeCCCCEEEEEEcCCC-----------------CcEEEEE-ECCCCCEEEEEeCCCeEEEEeC
Confidence 899998 3 33 34443311 1346788 5667777777777788888764
No 146
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.34 E-value=1.1 Score=42.17 Aligned_cols=114 Identities=16% Similarity=0.192 Sum_probs=73.8
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.-..++++++|.++++-...+.|+.++...+. ....+.+. -..-..|++.++|+++++=...
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~~d 86 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGH----------------KLGISDVAWSSDSNLLVSASDD 86 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--cchhhccC----------------CCceEEEEEcCCCCEEEEECCC
Confidence 34688899999987776677889999876421 22233221 1124679999999888877678
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
+.|+.++ .+. +.++.+.. ..-.+++ ..++++++++-...+.|+.+++....+
T Consensus 87 ~~i~vwd~~~~~~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~s~~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKGHS-----------------NYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKC 141 (312)
T ss_dssp SEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred CEEEEEECCCCcEEEEEcCCC-----------------CCEEEEE-EcCCCCEEEEEeCCCcEEEEECCCCEE
Confidence 8999998 333 44444321 1224566 456666666666677888888765444
No 147
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.26 E-value=0.46 Score=46.94 Aligned_cols=115 Identities=8% Similarity=0.022 Sum_probs=71.5
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC-cEEEEECCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADTMN 163 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~LYVAD~~N 163 (488)
-..|++.++|.++++-...+.|+.++...+. .+.++.|. -..-..+++.+++ .++++=...
T Consensus 130 V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~--~~~~~~~h----------------~~~V~~~~~~~~~~~~l~s~s~D 191 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDICIKVWDLAQQV--VLSSYRAH----------------AAQVTCVAASPHKDSVFLSCSED 191 (344)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEECSSCTTEEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCc----------------CCceEEEEecCCCCCceeeeccc
Confidence 3678899999988887777899999987532 23333222 1224578888887 477766667
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
+.|+.+| .+. +.++..... -....++++.+.+++++++-..++.|+.++.....
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~~~---------------~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCSAP---------------GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp SCEEEEETTSSSCEEECC-------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--
T ss_pred cccccccccccceeeeeeccee---------------eccceeeeecCCCCcceEEeccCCcEEEEECCCCc
Confidence 8888888 333 333221110 11345677555566777776677888888876543
No 148
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.23 E-value=1.4 Score=41.81 Aligned_cols=112 Identities=6% Similarity=0.050 Sum_probs=75.5
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.-..|+++|+|.++++-...+.|+.++...+. .+..+.+.. ..-..+++.++|+++++=...
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~--~~~~~~~~~----------------~~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQV--EVRSIQVTE----------------TPVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTE--EEEEEECCS----------------SCEEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--eeEEeeccC----------------CcEEEEEEeCCCCEEEEECCC
Confidence 35688999999988887778899999987532 233332220 113467888899888777778
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
+.|+.++ .+. +.++.+.. ..-.+|+ +.+++.++++-...+.|+.++....
T Consensus 77 ~~i~vwd~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFEAHP-----------------DYIRSIA-VHPTKPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp SEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEEGGGT
T ss_pred CEEEEEECCCCcEEEEEeCCC-----------------CcEEEEE-EcCCCCEEEEECCCCeEEEEECCCC
Confidence 8999998 333 44443321 1235677 5667777777777888888887654
No 149
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.21 E-value=0.96 Score=43.82 Aligned_cols=113 Identities=11% Similarity=0.091 Sum_probs=71.3
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
...+++.++|.++++-...+.|+.++...+. .+.++.+. -...+.|++.++|+++++=...+
T Consensus 187 v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~--~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGM--CRQTFTGH----------------ESDINAICFFPNGNAFATGSDDA 248 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCS--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCe--eEEEEcCC----------------cCCEEEEEEcCCCCEEEEEcCCC
Confidence 3567777777777776666777777765321 12222221 12356899999999888877788
Q ss_pred EEEEEc-CC-C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 165 AIRKIS-DS-G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 165 rIrkid-~g-g-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
.|+.++ .. . +.++.... .......++ +.++|.++++-..++.|+.++....
T Consensus 249 ~v~iwd~~~~~~~~~~~~~~---------------~~~~v~~~~-~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 249 TCRLFDLRADQELMTYSHDN---------------IICGITSVS-FSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp CEEEEETTTTEEEEEECCTT---------------CCSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTC
T ss_pred cEEEEECCCCcEEEEEccCC---------------cccceEEEE-ECCCCCEEEEECCCCeEEEEEcccC
Confidence 899998 32 2 22222110 011235677 5778888888778888999887643
No 150
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.03 E-value=1.3 Score=41.82 Aligned_cols=110 Identities=15% Similarity=0.058 Sum_probs=70.7
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.-..++++++|.++++-..++.|+.++...+. .+..+.+. -.....|+++++|+++++=...
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~~d 95 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE--RLGTLDGH----------------TGTIWSIDVDCFTKYCVTGSAD 95 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTTCC--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch--hhhhhhhc----------------CCcEEEEEEcCCCCEEEEEeCC
Confidence 35688899999977776667889999876421 23333221 1234678999999877766668
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-----CeEEEEEcCC
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-----RAIREIQLHF 230 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN-----~rIrkI~~~g 230 (488)
+.|+.++ .+. +.++... ....+++ ..+++..+++-..+ +.|+.++...
T Consensus 96 g~i~iwd~~~~~~~~~~~~~------------------~~v~~~~-~~~~~~~l~~~~~~~~~~~g~i~~~d~~~ 151 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSP------------------VPVKRVE-FSPCGNYFLAILDNVMKNPGSINIYEIER 151 (369)
T ss_dssp TEEEEEETTTCCEEEEEECS------------------SCEEEEE-ECTTSSEEEEEECCBTTBCCEEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEeecC------------------CCeEEEE-EccCCCEEEEecCCccCCCCEEEEEEecC
Confidence 8899998 333 3333211 1345677 45666666655555 7788777654
No 151
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.02 E-value=0.7 Score=44.16 Aligned_cols=115 Identities=8% Similarity=-0.053 Sum_probs=71.3
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..++++++|.++++-..++.|+.++..+.....+..+.+. -.....|++.++|+++++=...+
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~~~~~dg 74 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH----------------NGQVTGVDWAPDSNRIVTCGTDR 74 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECC----------------SSCEEEEEEETTTTEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC----------------CCcccEEEEeCCCCEEEEEcCCC
Confidence 46788999999888877788999998875311123333322 12356899999998777655677
Q ss_pred EEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 165 AIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 165 rIrkid--~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
.|+.++ .+.. ..+.-.. .-....+++ ..+++.++++-..++.|+.++....
T Consensus 75 ~i~vwd~~~~~~~~~~~~~~---------------~~~~v~~~~-~~~~~~~l~~~~~d~~v~i~d~~~~ 128 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVILR---------------INRAARCVR-WAPNEKKFAVGSGSRVISICYFEQE 128 (372)
T ss_dssp CEEEEEEETTEEEEEEECCC---------------CSSCEEEEE-ECTTSSEEEEEETTSSEEEEEEETT
T ss_pred eEEEEECCCCeeeeeEEeec---------------CCCceeEEE-ECCCCCEEEEEeCCCEEEEEEecCC
Confidence 888887 4432 2221110 011346777 4556665555556677877776654
No 152
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.96 E-value=0.87 Score=49.98 Aligned_cols=120 Identities=10% Similarity=-0.002 Sum_probs=77.1
Q ss_pred CCceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 83 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
.....|+.|++|.|||+-.++ -|.++++++ +.+..+... ++. .-+...+|+.|++|+|||+-.
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~-Gl~~~~~~~---~~~~~~~~~--------~~l----~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGG-GVGIYTPDM---QLVRKFNQY--------EGF----CSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSS-CEEEECTTC---CEEEEECTT--------TTC----SCSCEEEEEECTTSCEEEEET-
T ss_pred ceeEEEEEcCCCCEEEEEcCC-CEEEEeCCC---CeEEEccCC--------CCC----CCCeeEEEEECCCCCEEEEEC-
Confidence 356788999999999997643 488899875 334443211 110 123457899999999999986
Q ss_pred CCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE
Q 011333 163 NMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY 235 (488)
Q Consensus 163 N~rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~ 235 (488)
++-|.+++ . +.+..+. .. +|.+. +...+|+ .|.+|+|||+- ++-|.++++.......
T Consensus 558 ~Glv~~~d~~~~~~~~~~-~~--------~gl~~----~~i~~i~-~d~~g~lW~~t--~~Gl~~~~~~~~~~~~ 616 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQVFQ-RK--------EGLPN----THIRAIS-EDKNGNIWAST--NTGISCYITSKKCFYT 616 (781)
T ss_dssp TEEEEESCTTTCCCEEEC-GG--------GTCSC----CCCCEEE-ECSSSCEEEEC--SSCEEEEETTTTEEEE
T ss_pred CCceEEECCCCCcEEEcc-cc--------CCCCC----ceEEEEE-ECCCCCEEEEc--CCceEEEECCCCceEE
Confidence 44338888 3 3354432 11 11111 1235787 79999999985 4569999988654443
No 153
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.92 E-value=2.7 Score=39.50 Aligned_cols=114 Identities=16% Similarity=0.118 Sum_probs=73.6
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.-..+++.++|+++++-..++.|+.++..... .+..+.+. -..-..+++.++++++++=...
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~l~s~~~d 128 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGH----------------SNYVFCCNFNPQSNLIVSGSFD 128 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECC----------------SSCEEEEEECSSSSEEEEEETT
T ss_pred ceEEEEEcCCCCEEEEECCCCEEEEEECCCCc--EEEEEcCC----------------CCCEEEEEEcCCCCEEEEEeCC
Confidence 34688899999988887778899999987521 23333322 1124568889999887776677
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
+.|+.++ .+. +.++.+.. .....++ ..+++.++++-...+.|+.+++....+
T Consensus 129 ~~i~iwd~~~~~~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKTLPAHS-----------------DPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CcEEEEECCCCEEEEEecCCC-----------------CcEEEEE-EcCCCCEEEEEeCCCcEEEEECCCCce
Confidence 8899888 333 33332210 1224566 466676666666677888888765443
No 154
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.74 E-value=1.1 Score=43.68 Aligned_cols=109 Identities=7% Similarity=-0.015 Sum_probs=72.5
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEECCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTMN 163 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~~N 163 (488)
...+++.++|.++++-..++.|+.++..+ ..+..+.+. -.....|++.+++. ++++-...
T Consensus 166 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~h----------------~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 166 YCCVDVSVSRQMLATGDSTGRLLLLGLDG---HEIFKEKLH----------------KAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTS---CEEEEEECS----------------SSCEEEEEECSSCTTEEEEEETT
T ss_pred eEEEEECCCCCEEEEECCCCCEEEEECCC---CEEEEeccC----------------CCcEEEEEECCCCCCEEEEEeCC
Confidence 56788888888777776778888888764 233333322 22357899999998 77777678
Q ss_pred CEEEEEc--C----CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEEEECCCCeEEEEEcCC
Q 011333 164 MAIRKIS--D----SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 164 ~rIrkid--~----ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~-~G~LYVaD~gN~rIrkI~~~g 230 (488)
+.|+.++ . +......+. -....+|+ +.+ ++.++++-...+.|+.+++..
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~~~~-----------------~~~v~~~~-~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 227 ATVKLWDLRNIKDKNSYIAEMPH-----------------EKPVNAAY-FNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp SEEEEEEGGGCCSTTCEEEEEEC-----------------SSCEEEEE-ECTTTSCEEEEEESSSEEEEEETTB
T ss_pred CEEEEEeCCCCCcccceEEEecC-----------------CCceEEEE-EcCCCCCEEEEEcCCCcEEEEECCC
Confidence 8899988 2 222222221 11346777 455 777777767778899998764
No 155
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.56 E-value=3 Score=40.92 Aligned_cols=116 Identities=13% Similarity=0.106 Sum_probs=73.3
Q ss_pred CceEEEEccCC-cEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 84 EPYSVEVLPGG-ELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 84 ~P~GIaVd~dG-~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
....|++.++| +++++-...+.|+.++...+ ........ .++ -.....|+++++|+++++=..
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~----~~~---------~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG---AAVLTLGP----DVH---------PDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEETTTT---EEEEEECT----TTC---------CSCEEEEEECTTSSCEEEEET
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEECCCC---CccEEEec----CCC---------CCceEEEEECCCCCEEEEEec
Confidence 45678899987 57777666788999998752 22222210 011 123568999999986666656
Q ss_pred CCEEEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEE---CCCCeEEEEEcCCC
Q 011333 163 NMAIRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVID---RGNRAIREIQLHFD 231 (488)
Q Consensus 163 N~rIrkid-~-gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD---~gN~rIrkI~~~g~ 231 (488)
.+.|+.++ . +. +.++..+..+ ..+..++ ..+++.++++- ..++.|+.++....
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~---------------~~~~~~~-~~~~~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEG---------------TRPVHAV-FVSEGKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCS---------------SSCCEEE-ECSTTEEEEEEECTTCCEEEEEEETTBC
T ss_pred CCcEEEEeCCCCceeeeeccCCCC---------------CcceEEE-EcCCCcEEEEeccCCCCceEEEEcCccc
Confidence 78999999 3 33 3333111110 1246677 56678887776 57788999988753
No 156
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.49 E-value=1.2 Score=44.13 Aligned_cols=112 Identities=13% Similarity=0.046 Sum_probs=73.3
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..+++.++|.++++-...+.|+.++..... .+.++.|. -..-..|++.++|+.+++-...+
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~--~~~~~~~h----------------~~~v~~~~~~p~~~~l~s~s~d~ 187 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRK--IVMILQGH----------------EQDIYSLDYFPSGDKLVSGSGDR 187 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEEEccC----------------CCCEEEEEEcCCCCEEEEecCCC
Confidence 3578899999988887778899999987521 22233221 12246789999998877777788
Q ss_pred EEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 165 AIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 165 rIrkid-~-ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
.|+.++ . +.. .++... .....+++.+.++.++++-...+.|+.++.....
T Consensus 188 ~v~iwd~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~ 240 (393)
T 1erj_A 188 TVRIWDLRTGQCSLTLSIE------------------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 240 (393)
T ss_dssp EEEEEETTTTEEEEEEECS------------------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC
T ss_pred cEEEEECCCCeeEEEEEcC------------------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 999998 3 332 222211 1234566444477777777777888888876543
No 157
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.42 E-value=1.6 Score=43.05 Aligned_cols=117 Identities=9% Similarity=0.067 Sum_probs=72.2
Q ss_pred CceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcc-----cccEEEecCCCCccccCCCcccccccCCcceEEEcCCC-cE
Q 011333 84 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLY-----SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NI 156 (488)
Q Consensus 84 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~-----g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~L 156 (488)
.-..+++++ +++++++-...+.|+.++...... ..+..+.+. -.....|++.++| ++
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~p~~~~~ 146 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH----------------TKRVGIVAWHPTAQNV 146 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC----------------SSCEEEEEECSSBTTE
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC----------------CCeEEEEEECcCCCCE
Confidence 346888998 888888877788999999774311 112333222 1235679999998 57
Q ss_pred EEEECCCCEEEEEc-C-CC-cEEEe-CCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 157 YIADTMNMAIRKIS-D-SG-VTTIA-GGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 157 YVAD~~N~rIrkid-~-gg-VttIa-Gg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
+++=...+.|+.++ . +. +.++. .+. -....+++ ..+++.++++-...+.|+.+++....
T Consensus 147 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----------------~~~v~~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 147 LLSAGCDNVILVWDVGTGAAVLTLGPDVH----------------PDTIYSVD-WSRDGALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECTTTC----------------CSCEEEEE-ECTTSSCEEEEETTSEEEEEETTTTE
T ss_pred EEEEcCCCEEEEEECCCCCccEEEecCCC----------------CCceEEEE-ECCCCCEEEEEecCCcEEEEeCCCCc
Confidence 77665678888888 3 33 33331 110 01235666 45566665555566788888876544
Q ss_pred e
Q 011333 233 C 233 (488)
Q Consensus 233 ~ 233 (488)
+
T Consensus 210 ~ 210 (402)
T 2aq5_A 210 V 210 (402)
T ss_dssp E
T ss_pred e
Confidence 4
No 158
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.36 E-value=1.3 Score=41.74 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=70.6
Q ss_pred CceEEEEccC---CcEEEEECCCCeEEEEeCCCCccccc-EEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEE
Q 011333 84 EPYSVEVLPG---GELLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA 159 (488)
Q Consensus 84 ~P~GIaVd~d---G~LYVaD~~n~rI~kid~~g~~~g~i-~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVA 159 (488)
.-..|+++++ |.++++-..++.|+.++..... ..+ ..+.+. -.....|++.++|+++++
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG-QTIPKAQQMH----------------TGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS-CEEEEEEEEC----------------SSCEEEEEECTTSSEEEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC-ceeEEEeccc----------------cCCEEEEEECcCCCEEEE
Confidence 3467888887 5877776667888888876311 122 233222 123567999999987666
Q ss_pred ECCCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEE-CCCCeEEEEECCCCeEEEEEcCCC
Q 011333 160 DTMNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYI-GSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 160 D~~N~rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~v-d~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
=..++.|+.++ . +....+.+.. ....++++. .+++.++++-..++.|+.+++...
T Consensus 104 ~~~dg~v~iwd~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQIAQHD-----------------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp EETTSEEEEEETTTTEEEEEEECS-----------------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS
T ss_pred EcCCCcEEEEEcCCCCceeecccc-----------------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC
Confidence 66688899998 3 3333332211 123556631 567776666666778888887643
No 159
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.22 E-value=1.9 Score=40.66 Aligned_cols=110 Identities=13% Similarity=0.024 Sum_probs=66.1
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....++++++|.++++-..++.|+.++..... .+..+.. -.....++++++|..+++-...
T Consensus 220 ~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 220 SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ--VLKKYET-----------------DCPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEEC-----------------SSCEEEEEECSSSSEEEEEECC
T ss_pred ceeEEEECCCCCEEEEecCCceEEEEECCCCc--eeeeecC-----------------CCCceeEEecCCCceEEEeecC
Confidence 45677888888866666667788888876421 1222211 1234578888888755544333
Q ss_pred C--------------EEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEE
Q 011333 164 M--------------AIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREI 226 (488)
Q Consensus 164 ~--------------rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI 226 (488)
. .|+.++ .+. +.++.+. -....+++ +.+++.++++-...+.|+.+
T Consensus 281 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----------------~~~v~~~~-~s~~~~~l~s~~~dg~v~iw 342 (369)
T 3zwl_B 281 EAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH-----------------FGPLNTVA-ISPQGTSYASGGEDGFIRLH 342 (369)
T ss_dssp C-------------CEEEEEETTTCCEEEEEECC-----------------SSCEEEEE-ECTTSSEEEEEETTSEEEEE
T ss_pred CCceEEEEecCCCcceeEEEecCCCcchhheecc-----------------cCcEEEEE-ECCCCCEEEEEcCCCeEEEE
Confidence 3 566666 222 3333321 12346777 56677777777777888888
Q ss_pred EcCC
Q 011333 227 QLHF 230 (488)
Q Consensus 227 ~~~g 230 (488)
+...
T Consensus 343 ~~~~ 346 (369)
T 3zwl_B 343 HFEK 346 (369)
T ss_dssp EECH
T ss_pred ECcc
Confidence 8753
No 160
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.17 E-value=1.3 Score=48.71 Aligned_cols=119 Identities=9% Similarity=0.001 Sum_probs=75.3
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....|+.|++|.|||+.. +.|.++++.+. .+..+.... . .. ..-+...+|+.|++|+|||+-..+
T Consensus 451 ~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~---~~~~~~~~~-~------~~---~~~~~i~~i~~d~~g~lWigt~~~ 515 (781)
T 3v9f_A 451 DVRVFYEDKNKKIWIGTH--AGVFVIDLASK---KVIHHYDTS-N------SQ---LLENFVRSIAQDSEGRFWIGTFGG 515 (781)
T ss_dssp CEEEEEECTTSEEEEEET--TEEEEEESSSS---SCCEEECTT-T------SS---CSCSCEEEEEECTTCCEEEEESSS
T ss_pred eEEEEEECCCCCEEEEEC--CceEEEeCCCC---eEEecccCc-c------cc---cccceeEEEEEcCCCCEEEEEcCC
Confidence 456788888999999876 57999998752 333332210 0 00 012457799999999999997643
Q ss_pred CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 164 MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 164 ~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
-|.+++ +++ +..+.. .. +. .-+...+|+ .|.+|+|||+-. ++.|.++++.....
T Consensus 516 -Gl~~~~~~~~~~~~~~~-~~--------~l----~~~~i~~i~-~d~~g~lWi~T~-~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 516 -GVGIYTPDMQLVRKFNQ-YE--------GF----CSNTINQIY-RSSKGQMWLATG-EGLVCFPSARNFDY 571 (781)
T ss_dssp -CEEEECTTCCEEEEECT-TT--------TC----SCSCEEEEE-ECTTSCEEEEET-TEEEEESCTTTCCC
T ss_pred -CEEEEeCCCCeEEEccC-CC--------CC----CCCeeEEEE-ECCCCCEEEEEC-CCceEEECCCCCcE
Confidence 477888 333 444321 11 11 012346776 789999999876 55548888765443
No 161
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.08 E-value=1.3 Score=42.84 Aligned_cols=109 Identities=6% Similarity=0.050 Sum_probs=68.7
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....|++.|+|.++++-...+.|+.++..... .+..+ ... + .......++++++|.++++=..+
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~--~~~~~-~~~----~---------~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQ--ELMTY-SHD----N---------IICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEE-CCT----T---------CCSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc--EEEEE-ccC----C---------cccceEEEEECCCCCEEEEECCC
Confidence 34678888888877777777888888876421 11222 110 0 01234678999999988887778
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEE
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREI 226 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI 226 (488)
+.|+.++ .+. +.++.+-. ..-.+|+ +.++|.++++-...+.|+.+
T Consensus 292 ~~i~vwd~~~~~~~~~~~~h~-----------------~~v~~~~-~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAGHD-----------------NRVSCLG-VTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp SEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECTTSSCEEEEETTSCEEEE
T ss_pred CeEEEEEcccCcEeeEeecCC-----------------CcEEEEE-EcCCCCEEEEEcCCccEEec
Confidence 8999998 333 44554321 1235677 56677766666666667654
No 162
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.05 E-value=3.4 Score=41.64 Aligned_cols=114 Identities=15% Similarity=0.139 Sum_probs=63.5
Q ss_pred CceEEEEccCCc-EEEEEC--CCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEE
Q 011333 84 EPYSVEVLPGGE-LLILDS--ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 159 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~--~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVA 159 (488)
....++++|||. |+++.. ++..|+.++..+ +....+.+. -.....+++.++|. |+++
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~---~~~~~l~~~----------------~~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS---GQIRQVTDG----------------RSNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCEEECCCC----------------SSCEEEEEECTTSSEEEEE
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCC---CCEEeCcCC----------------CCcccceEECCCCCEEEEE
Confidence 346788888887 554432 345688888775 333333222 01245789999997 5544
Q ss_pred EC--CCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECC--CCeEEEEEcCCCc
Q 011333 160 DT--MNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRG--NRAIREIQLHFDD 232 (488)
Q Consensus 160 D~--~N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~g--N~rIrkI~~~g~~ 232 (488)
-. +..+|..++ .++ +..+.... .....+++ .++| .|+++... ...|+.+++.+..
T Consensus 285 s~~~g~~~i~~~d~~~~~~~~l~~~~-----------------~~~~~~~~-spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 285 SDQAGRPQVYKVNINGGAPQRITWEG-----------------SQNQDADV-SSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp ECTTSSCEEEEEETTSSCCEECCCSS-----------------SEEEEEEE-CTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred ECCCCCcEEEEEECCCCCEEEEecCC-----------------CcccCeEE-CCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 32 234788888 333 44332210 12235663 4444 45555443 3578888877655
Q ss_pred eE
Q 011333 233 CA 234 (488)
Q Consensus 233 ~~ 234 (488)
+.
T Consensus 347 ~~ 348 (415)
T 2hqs_A 347 VQ 348 (415)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 163
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=93.02 E-value=0.95 Score=49.33 Aligned_cols=121 Identities=17% Similarity=0.161 Sum_probs=71.8
Q ss_pred cccCCcceEEEcC-CCcEEEEECCC---------------------CEEEEEc-CC---C-------cEEEeCCccCCCC
Q 011333 140 ARMNHPKGLTVDD-RGNIYIADTMN---------------------MAIRKIS-DS---G-------VTTIAGGKWGRGG 186 (488)
Q Consensus 140 a~Ln~P~GIAvD~-dG~LYVAD~~N---------------------~rIrkid-~g---g-------VttIaGg~~g~~~ 186 (488)
..|..|.||++++ +|.||||-+.| .+|.++. ++ . +..++|.......
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 4689999999997 78999998753 4688886 11 1 1222232111000
Q ss_pred C---CCCCCcccccCCCCCeeEEECCCCeEEEEEC------------CCCeEEEEEcCCCceEEe-c--cCCCcceEEEE
Q 011333 187 G---HVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR------------GNRAIREIQLHFDDCAYQ-Y--GSSFPLGIAVL 248 (488)
Q Consensus 187 g---~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~------------gN~rIrkI~~~g~~~~~~-~--~~g~P~GIav~ 248 (488)
. ..........|+.|-.|+ +++.|+|||+.- +|+.++.+.+.......+ . .....+|+++.
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~-fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fs 539 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLG-FDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEE-ECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred cccccccccCCCCCccCCcceE-ECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeEC
Confidence 0 011122345699999999 799999999864 356777776653322221 1 11245566666
Q ss_pred ecCCceEEEEEEEEec
Q 011333 249 LAAGFFGYMLALLQRR 264 (488)
Q Consensus 249 ~g~g~~Gy~~a~l~~~ 264 (488)
.. .-+++...|++
T Consensus 540 pD---g~tlfvniQHP 552 (592)
T 3zwu_A 540 PD---QKTLFVGIQHP 552 (592)
T ss_dssp TT---SSEEEEEEEST
T ss_pred CC---CCEEEEEEECC
Confidence 43 12567777877
No 164
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.97 E-value=0.87 Score=45.65 Aligned_cols=114 Identities=14% Similarity=0.179 Sum_probs=75.3
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....+++++++.++++-...+.|+.++...+. ...++.|. -..-..|+++++|+++++=...
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--~~~~l~~h----------------~~~V~~v~~~~~~~~l~sgs~D 171 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGD--FERTLKGH----------------TDSVQDISFDHSGKLLASCSAD 171 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCC--CCEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEEecc----------------CCcEEEEEEcCCCCEEEEEeCC
Confidence 34688899999988888788899999987532 23334322 1124679999999988877777
Q ss_pred CEEEEEc-CC-C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 164 MAIRKIS-DS-G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 164 ~rIrkid-~g-g-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
+.|+.++ .+ . +.++.+. -..-.+++ +.+++..+++-...+.|+.++.....+
T Consensus 172 ~~i~iwd~~~~~~~~~~~~h-----------------~~~V~~v~-~~p~~~~l~s~s~D~~i~~wd~~~~~~ 226 (410)
T 1vyh_C 172 MTIKLWDFQGFECIRTMHGH-----------------DHNVSSVS-IMPNGDHIVSASRDKTIKMWEVQTGYC 226 (410)
T ss_dssp SCCCEEETTSSCEEECCCCC-----------------SSCEEEEE-ECSSSSEEEEEETTSEEEEEETTTCCE
T ss_pred CeEEEEeCCCCceeEEEcCC-----------------CCCEEEEE-EeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 8888888 32 2 2222221 01235667 456676666666778888888765544
No 165
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=92.88 E-value=0.9 Score=43.95 Aligned_cols=68 Identities=12% Similarity=-0.044 Sum_probs=46.9
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....+++.++| ++++-...+.|+.++..... .+..+.+. -.....++++++|+++++-..+
T Consensus 291 ~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~--~~~~~~~~----------------~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 291 SIVSASWVGDD-KVISCSMDGSVRLWSLKQNT--LLALSIVD----------------GVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEETTTTE--EEEEEECT----------------TCCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCC-EEEEEeCCCcEEEEECCCCc--EeEecccC----------------CccEEEEEEcCCCCEEEEEECC
Confidence 45678888888 66666667899999986421 22222221 1235689999999877777677
Q ss_pred CEEEEEc
Q 011333 164 MAIRKIS 170 (488)
Q Consensus 164 ~rIrkid 170 (488)
+.|+.++
T Consensus 352 g~i~i~~ 358 (425)
T 1r5m_A 352 GQVNVYD 358 (425)
T ss_dssp SCEEEEE
T ss_pred CeEEEEE
Confidence 8888888
No 166
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.88 E-value=4.5 Score=39.70 Aligned_cols=119 Identities=10% Similarity=0.057 Sum_probs=70.4
Q ss_pred EEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCE
Q 011333 87 SVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMA 165 (488)
Q Consensus 87 GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~r 165 (488)
.+++.+ +++++++-...+.|+.++..... ..+.++.|. -..-+.|++.++|..+++=...+.
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~D~~ 272 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITS-RAVRTYHGH----------------EGDINSVKFFPDGQRFGTGSDDGT 272 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTC-CCCEEECCC----------------SSCCCEEEECTTSSEEEEECSSSC
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCC-cceEEECCc----------------CCCeEEEEEecCCCeEEEEcCCCe
Confidence 444443 55666665555666666653110 112223221 123567999999999888888889
Q ss_pred EEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 166 IRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 166 Irkid-~-gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
|+.++ . +. +.++...... ..........++ +.++|.++++-..++.|+.++.....+
T Consensus 273 i~lwd~~~~~~~~~~~~~~~~----------~~~~~~~v~~~~-~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 273 CRLFDMRTGHQLQVYNREPDR----------NDNELPIVTSVA-FSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp EEEEETTTTEEEEEECCCCSS----------SCCSSCSCSEEE-ECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred EEEEECCCCcEEEEecccccc----------cccccCceEEEE-ECCCCCEEEEEECCCCEEEEECCCCce
Confidence 99999 3 33 3333221100 011122346788 577888888888889999998765443
No 167
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.81 E-value=1.2 Score=44.66 Aligned_cols=113 Identities=14% Similarity=0.129 Sum_probs=74.9
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..|+++++|.++++-...+.|+.++..+.. .+.++.| + -..-..+++.++|+.+++=...+
T Consensus 153 V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~--~~~~~~~-------h---------~~~V~~v~~~p~~~~l~s~s~D~ 214 (410)
T 1vyh_C 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRTMHG-------H---------DHNVSSVSIMPNGDHIVSASRDK 214 (410)
T ss_dssp EEEEEECTTSSEEEEEETTSCCCEEETTSSC--EEECCCC-------C---------SSCEEEEEECSSSSEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEcC-------C---------CCCEEEEEEeCCCCEEEEEeCCC
Confidence 4678888888888877777888888876421 1222211 1 12246789999998888777788
Q ss_pred EEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 165 AIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 165 rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
.|+.++ .+. +.++.+.. ..-..++ ..+++.++++-...+.|+.++.....+
T Consensus 215 ~i~~wd~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~g~~l~s~s~D~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 215 TIKMWEVQTGYCVKTFTGHR-----------------EWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKEC 268 (410)
T ss_dssp EEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred eEEEEECCCCcEEEEEeCCC-----------------ccEEEEE-ECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 999998 333 45554321 1224556 567788877777788888888765444
No 168
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.76 E-value=1.1 Score=43.32 Aligned_cols=141 Identities=16% Similarity=0.064 Sum_probs=75.5
Q ss_pred CceEEEEccCCcEEEEECCC---CeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEE
Q 011333 84 EPYSVEVLPGGELLILDSAN---SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 160 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n---~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD 160 (488)
....++++++|.++++-... +.|+.++..... .+..+.+... ... .-....+.-.....|+++++|.++++-
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTH--SSQ-ASLGEFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC--EEEEECBC-----------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCCCc--ccceeccCcc--ccc-ccccccccCCcEEEEEECCCCCEEEEE
Confidence 45788899999877776656 789999976421 2333332100 000 000000012235689999999888877
Q ss_pred CCCCEEEEEc--CCC-cEEEeCCccCCCC--CCCCCCc--ccccCCCCCeeEEECCCC----------eEEEEECCCCeE
Q 011333 161 TMNMAIRKIS--DSG-VTTIAGGKWGRGG--GHVDGPS--EDAKFSNDFDVVYIGSSC----------SLLVIDRGNRAI 223 (488)
Q Consensus 161 ~~N~rIrkid--~gg-VttIaGg~~g~~~--g~~dG~~--~~a~f~~P~gIa~vd~~G----------~LYVaD~gN~rI 223 (488)
..++.|+.++ .+. +.++......... ....|.. ....-....++++ .+++ .++++-...+.|
T Consensus 310 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~-~~~g~~~~~~~~~~~~l~s~~~dg~i 388 (397)
T 1sq9_A 310 GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKF-LKKGWRSGMGADLNESLCCVCLDRSI 388 (397)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEE-ECTTTSBSTTCTTSCEEEEEETTTEE
T ss_pred eCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEe-ccccccccccccccceEEEecCCCcE
Confidence 7789999999 333 4444411000000 0000000 0000123567884 5555 677776678888
Q ss_pred EEEEcCC
Q 011333 224 REIQLHF 230 (488)
Q Consensus 224 rkI~~~g 230 (488)
+.+++..
T Consensus 389 ~iw~~~~ 395 (397)
T 1sq9_A 389 RWFREAG 395 (397)
T ss_dssp EEEEEEC
T ss_pred EEEEcCC
Confidence 8887653
No 169
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.66 E-value=3.5 Score=40.22 Aligned_cols=130 Identities=17% Similarity=0.209 Sum_probs=75.4
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....++++++|.++++-..++.|+.++...+. .+..+.+. -.....|++.++|.++++=...
T Consensus 141 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQDMQLKIWSVKDGS--NPRTLIGH----------------RATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--CCEEEECC----------------SSCEEEEEEETTTTEEEEEETT
T ss_pred ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--CceEEcCC----------------CCcEEEEEEcCCCCEEEEEcCC
Confidence 45788899999877777777899999986432 33344332 1235678899998877766667
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCC--------CCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGG--------HVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g--------~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
+.|+.++ .+. +.++....... .. ..........-.....++ +.+++.++++-..++.|+.+++....
T Consensus 203 ~~v~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 203 GTIRLWECGTGTTIHTFNRKENPH-DGVNSIALFVGTDRQLHEISTSKKNNLE-FGTYGKYVIAGHVSGVITVHNVFSKE 280 (420)
T ss_dssp SCEEEEETTTTEEEEEECBTTBTT-CCEEEEEEEECCCSSCGGGCCCCCCTTC-SSCTTEEEEEEETTSCEEEEETTTCC
T ss_pred CcEEEeECCCCceeEEeecCCCCC-CCccEEEEecCCcceeeecccCcccceE-EcCCCCEEEEEcCCCeEEEEECCCCc
Confidence 7888888 333 33333211000 00 000000000112334555 46677777777777888888876544
Q ss_pred e
Q 011333 233 C 233 (488)
Q Consensus 233 ~ 233 (488)
.
T Consensus 281 ~ 281 (420)
T 3vl1_A 281 Q 281 (420)
T ss_dssp E
T ss_pred e
Confidence 3
No 170
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=92.64 E-value=2.6 Score=39.97 Aligned_cols=110 Identities=8% Similarity=0.082 Sum_probs=71.7
Q ss_pred eEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCE
Q 011333 86 YSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMA 165 (488)
Q Consensus 86 ~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~r 165 (488)
..+++.++|+++++-...+.|+.++...+. .+..+.+. -..-..|++.+++.++++=...+.
T Consensus 59 ~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~--~~~~~~~h----------------~~~v~~~~~~~~~~~l~sgs~D~~ 120 (304)
T 2ynn_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAH----------------PDYIRSIAVHPTKPYVLSGSDDLT 120 (304)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECC----------------SSCEEEEEECSSSSEEEEEETTSC
T ss_pred EEEEEeCCCCEEEEECCCCEEEEEECCCCc--EEEEEeCC----------------CCcEEEEEEcCCCCEEEEECCCCe
Confidence 467788899988887778899999987532 23333332 112467999999988887777888
Q ss_pred EEEEc-CCC--c-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 166 IRKIS-DSG--V-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 166 Irkid-~gg--V-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
|+.++ ..+ + .++.+.. ....++++.+.++.++++-...+.|+.+++..
T Consensus 121 v~lWd~~~~~~~~~~~~~h~-----------------~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 121 VKLWNWENNWALEQTFEGHE-----------------HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp EEEEEGGGTTEEEEEECCCC-----------------SCEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred EEEEECCCCcchhhhhcccC-----------------CcEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 99888 322 2 2232211 12356774444667777766778888888754
No 171
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=92.39 E-value=1.7 Score=41.93 Aligned_cols=109 Identities=12% Similarity=-0.003 Sum_probs=70.1
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
...++++++|.++++-..++.|+.++..... .+..+.+. -.....+++.++| ++++-...+
T Consensus 250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~----------------~~~i~~~~~~~~~-~l~~~~~d~ 310 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGN--SQNCFYGH----------------SQSIVSASWVGDD-KVISCSMDG 310 (425)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEECSSSBS--CSEEECCC----------------SSCEEEEEEETTT-EEEEEETTS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCc--cceEecCC----------------CccEEEEEECCCC-EEEEEeCCC
Confidence 4677888888877766667788888876421 22333221 1235678999998 666666788
Q ss_pred EEEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 165 AIRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 165 rIrkid-~-gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
.|+.++ . +. +.++.+.. .....++ +.+++.++++-..++.|+.++...
T Consensus 311 ~i~i~d~~~~~~~~~~~~~~-----------------~~i~~~~-~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 311 SVRLWSLKQNTLLALSIVDG-----------------VPIFAGR-ISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp EEEEEETTTTEEEEEEECTT-----------------CCEEEEE-ECTTSSEEEEEETTSCEEEEECHH
T ss_pred cEEEEECCCCcEeEecccCC-----------------ccEEEEE-EcCCCCEEEEEECCCeEEEEECCC
Confidence 999998 3 33 33333211 1345677 566777777777778899888764
No 172
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.36 E-value=4.6 Score=38.91 Aligned_cols=132 Identities=11% Similarity=0.011 Sum_probs=75.3
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....+++.++| ++++-..++.|+.++..... .+..+.+. .++. ..-.....|+++++|+++++-...
T Consensus 188 ~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~--~~~~~~~~----~~h~------~~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 188 FATSVDISERG-LIATGFNNGTVQISELSTLR--PLYNFESQ----HSMI------NNSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp CCCEEEECTTS-EEEEECTTSEEEEEETTTTE--EEEEEECC----C---------CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred CceEEEECCCc-eEEEEeCCCcEEEEECCCCc--eeEEEecc----cccc------ccCCccceEEECCCCCEEEEEecC
Confidence 46789999999 88888888999999987421 22233220 0000 001235689999999877766556
Q ss_pred ---CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 164 ---MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 164 ---~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
+.|+.++ .+. +.++.+..... ... ....+.-....+++ ..+++.++++-..++.|+.+++....+
T Consensus 255 ~~~g~i~i~d~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~v~~~~-~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIGSLSVPTHSS--QAS--LGEFAHSSWVMSLS-FNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp TTEEEEEEEETTTCCEEEEECBC------------CCBSBSSCEEEEE-ECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCCceEEEEECCCCcccceeccCcccc--ccc--ccccccCCcEEEEE-ECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 7899998 333 34443310000 000 00000112345677 456676666666778888888865443
No 173
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.25 E-value=4.1 Score=44.66 Aligned_cols=118 Identities=10% Similarity=0.025 Sum_probs=74.7
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....|+.|++|.|||+.. +.|.++++.+. .+ .+.... .. ++ ..-+...+|+.|++|+|||+-..
T Consensus 499 ~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~---~~-~~~~~~-~~----~~----l~~~~i~~i~~d~~g~lWigT~~- 562 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGGE--EGLSVFKQEGL---DI-QKASIL-PV----SN----VTKLFTNCIYEASNGIIWVGTRE- 562 (795)
T ss_dssp CEEEEEECTTCCEEEEES--SCEEEEEEETT---EE-EECCCS-CS----CG----GGGSCEEEEEECTTSCEEEEESS-
T ss_pred eEEEEEECCCCCEEEEeC--CceEEEeCCCC---eE-EEecCC-CC----CC----CCCCeeEEEEECCCCCEEEEeCC-
Confidence 346788899999999986 46888887652 22 221100 00 00 01234678999999999999863
Q ss_pred CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 011333 164 MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 164 ~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~ 234 (488)
-|.+++ ..+ +..+ ... +|.+. +...+|+ .|.+|+|||+- ++-|.++++......
T Consensus 563 -Gl~~~d~~~~~~~~~-~~~--------~gl~~----~~i~~i~-~d~~g~lWi~t--~~Gl~~~~~~~~~~~ 618 (795)
T 4a2l_A 563 -GFYCFNEKDKQIKRY-NTT--------NGLPN----NVVYGIL-EDSFGRLWLST--NRGISCFNPETEKFR 618 (795)
T ss_dssp -CEEEEETTTTEEEEE-CGG--------GTCSC----SCEEEEE-ECTTSCEEEEE--TTEEEEEETTTTEEE
T ss_pred -CceeECCCCCcEEEe-CCC--------CCCch----hheEEEE-ECCCCCEEEEc--CCceEEEcCCCCcEE
Confidence 688888 333 4433 211 11111 1235676 78999999987 577899998765544
No 174
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.07 E-value=1.7 Score=42.51 Aligned_cols=108 Identities=10% Similarity=0.108 Sum_probs=66.5
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..+++.|+|.++++-...+.|+.++..... .+..+... ........+++.++|.+.++-...+
T Consensus 243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--~~~~~~~~--------------~~~~~~~~~~~s~~g~~l~~g~~d~ 306 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDATCRLYDLRADR--EVAIYSKE--------------SIIFGASSVDFSLSGRLLFAGYNDY 306 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCT--------------TCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCC--------------CcccceeEEEEeCCCCEEEEEECCC
Confidence 3567777777777766666778777765321 11222110 0012346789999999888776778
Q ss_pred EEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEE
Q 011333 165 AIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREI 226 (488)
Q Consensus 165 rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI 226 (488)
.|+.++ .+. +.++.+.. ....+|+ +.++|.++++-...+.|+.+
T Consensus 307 ~i~vwd~~~~~~~~~l~~h~-----------------~~v~~l~-~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 307 TINVWDVLKGSRVSILFGHE-----------------NRVSTLR-VSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp CEEEEETTTCSEEEEECCCS-----------------SCEEEEE-ECTTSSCEEEEETTSEEEEE
T ss_pred cEEEEECCCCceEEEEECCC-----------------CcEEEEE-ECCCCCEEEEEcCCCCEEec
Confidence 899998 344 44443321 1346777 56777777776667777765
No 175
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.03 E-value=2.1 Score=41.57 Aligned_cols=113 Identities=10% Similarity=0.001 Sum_probs=75.1
Q ss_pred CceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 84 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 84 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
.-..+++.+ ++.++++-..++.|+.++..+ ..+..+.+.. ++ -.....+++.++|+++++-..
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~----~~---------~~~v~~~~~~~~~~~l~~~~~ 183 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSG---SVIQVFAKTD----SW---------DYWYCCVDVSVSRQMLATGDS 183 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTS---CEEEEEECCC----CS---------SCCEEEEEEETTTTEEEEEET
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCC---CceEEEeccC----CC---------CCCeEEEEECCCCCEEEEECC
Confidence 456788888 667777766778999999875 3444444321 11 123568999999987777777
Q ss_pred CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEEEcCC
Q 011333 163 NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 163 N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaD~gN~rIrkI~~~g 230 (488)
.+.|+.++ .+. +.++.+.. ....+|+ ..+++. ++++-...+.|+.+++..
T Consensus 184 d~~i~i~d~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 184 TGRLLLLGLDGHEIFKEKLHK-----------------AKVTHAE-FNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp TSEEEEEETTSCEEEEEECSS-----------------SCEEEEE-ECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEECCCCEEEEeccCC-----------------CcEEEEE-ECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 88999999 444 44444321 1346777 455565 777766778888888774
No 176
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.94 E-value=4.3 Score=43.58 Aligned_cols=112 Identities=6% Similarity=0.036 Sum_probs=70.1
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
...+++++|+|.++++-..++.|+.++...+ ..+..+.+. -.....++++++|+.+++=...
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~~d 76 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--VEVRSIQVT----------------ETPVRAGKFIARKNWIIVGSDD 76 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECC----------------SSCEEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCC--ceEEEEecC----------------CCcEEEEEEeCCCCEEEEEeCC
Confidence 4578899999997777667789999997642 123333322 1125678999999866655557
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
+.|+.++ .+. +.++.+.. ....+++ +.+++..+++-..++.|+.++....
T Consensus 77 g~i~vw~~~~~~~~~~~~~~~-----------------~~v~~~~-~s~~~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEAHP-----------------DYIRSIA-VHPTKPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp SEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSEEEEEEGGGT
T ss_pred CeEEEEECCCCcEEEEEecCC-----------------CCEEEEE-EeCCCCEEEEEcCCCEEEEEECCCC
Confidence 8899988 344 34443321 1235666 4555554444445677777776643
No 177
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.83 E-value=9.7 Score=38.19 Aligned_cols=113 Identities=14% Similarity=0.166 Sum_probs=65.1
Q ss_pred CceEEEEccCCc-EEEEECC--CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEE
Q 011333 84 EPYSVEVLPGGE-LLILDSA--NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 159 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~--n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVA 159 (488)
....++++|||. |+++... ...|+.++..+ ++...+.+.. .....+++.++|. |+++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t---g~~~~l~~~~----------------~~~~~~~~spdg~~la~~ 240 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN---GAVRQVASFP----------------RHNGAPAFSPDGSKLAFA 240 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCEEEEECCS----------------SCEEEEEECTTSSEEEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCC---CcEEEeecCC----------------CcccCEEEcCCCCEEEEE
Confidence 346788899987 4444432 35899999876 3444443320 1246789999997 5545
Q ss_pred EC--CCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEEC--CCCeEEEEEcCCCc
Q 011333 160 DT--MNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDR--GNRAIREIQLHFDD 232 (488)
Q Consensus 160 D~--~N~rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaD~--gN~rIrkI~~~g~~ 232 (488)
-. ++..|+.++ . +.+..+.+.. ....++++ .++|+ |+++.. +..+|+.+++.+..
T Consensus 241 ~~~~g~~~i~~~d~~~~~~~~l~~~~-----------------~~~~~~~~-spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 241 LSKTGSLNLYVMDLASGQIRQVTDGR-----------------SNNTEPTW-FPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp ECTTSSCEEEEEETTTCCEEECCCCS-----------------SCEEEEEE-CTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EecCCCceEEEEECCCCCEEeCcCCC-----------------CcccceEE-CCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 33 256788888 3 3344433211 12345664 45554 554442 23478888877644
Q ss_pred e
Q 011333 233 C 233 (488)
Q Consensus 233 ~ 233 (488)
+
T Consensus 303 ~ 303 (415)
T 2hqs_A 303 P 303 (415)
T ss_dssp C
T ss_pred E
Confidence 3
No 178
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.78 E-value=0.96 Score=44.48 Aligned_cols=115 Identities=9% Similarity=-0.008 Sum_probs=70.8
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEECCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTMN 163 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~~N 163 (488)
-..|++.++|.++++-...+.|+.++...+. .+..+-+. -...+.|++.+++. ++++-..+
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~--~~~~~~~h----------------~~~v~~v~~s~~~~~~~~s~~~d 203 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA--VLKSYNAH----------------SSEVNCVAACPGKDTIFLSCGED 203 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEECTTCSSCEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCC----------------CCCEEEEEEccCCCceeeeeccC
Confidence 4678899999988877777899999987521 12222221 12346788888774 66666667
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
+.|+.++ .+. +..+.... .-..+..|++.+..+.++++-..++.|+.+++....
T Consensus 204 g~v~~wd~~~~~~~~~~~~~~---------------~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 204 GRILLWDTRKPKPATRIDFCA---------------SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp SCEEECCTTSSSCBCBCCCTT---------------CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG
T ss_pred CceEEEECCCCceeeeeeecc---------------ccccccchhhhhcccceEEEeecccceeEEECCCCc
Confidence 8888887 222 21111100 011346777555556777766667888888876543
No 179
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.66 E-value=2.5 Score=42.33 Aligned_cols=117 Identities=13% Similarity=0.141 Sum_probs=73.1
Q ss_pred ceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEEECC
Q 011333 85 PYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADTM 162 (488)
Q Consensus 85 P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVAD~~ 162 (488)
-+.|+++| +++++++-..++.|+.++..... ....+.. .|+ -..-++|++.+ +++++++=..
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~--~~~~~~~-----~gH---------~~~V~~l~f~p~~~~~l~s~s~ 185 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD--KPTFIKG-----IGA---------GGSITGLKFNPLNTNQFYASSM 185 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCS--CCEEECC-----CSS---------SCCCCEEEECSSCTTEEEEECS
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC--ceeEEEc-----cCC---------CCCEEEEEEeCCCCCEEEEEeC
Confidence 46788888 56677776667899999876432 1122211 122 11246789986 6788887777
Q ss_pred CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 163 NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 163 N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
.+.|+.+| .++ +.++...... -.....++ +.+++.++++-...+.|+.+++.+..
T Consensus 186 D~~v~iwd~~~~~~~~~~~~~~~--------------~~~~~~~~-~~~~~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 186 EGTTRLQDFKGNILRVFASSDTI--------------NIWFCSLD-VSASSRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp SSCEEEEETTSCEEEEEECCSSC--------------SCCCCCEE-EETTTTEEEEECSSSBEEEEESSSCB
T ss_pred CCEEEEeeccCCceeEEeccCCC--------------CccEEEEE-ECCCCCEEEEEeCCCcEeeeccCcce
Confidence 78899998 444 4444432110 11234566 45677777777778889998887643
No 180
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.66 E-value=3 Score=40.68 Aligned_cols=110 Identities=14% Similarity=0.148 Sum_probs=70.4
Q ss_pred EEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCEEEE
Q 011333 89 EVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRK 168 (488)
Q Consensus 89 aVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rIrk 168 (488)
++.++|.++++-..++.|+.++... +....... ++ -.....|++.++|+++++=...+.|+.
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~------~h---------~~~v~~~~~~~~~~~l~s~s~d~~i~i 165 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNF---NLQREIDQ------AH---------VSEITKLKFFPSGEALISSSQDMQLKI 165 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTS---CEEEEETT------SS---------SSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEecCCCEEEEEECCCCEEEEeCCC---cceeeecc------cc---------cCccEEEEECCCCCEEEEEeCCCeEEE
Confidence 4567888777766778899998775 22222211 11 223568999999987777667889999
Q ss_pred Ec--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 011333 169 IS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 169 id--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~ 234 (488)
++ .+. +.++.+.. ....++++ .+++.++++-...+.|+.+++....+.
T Consensus 166 wd~~~~~~~~~~~~h~-----------------~~v~~~~~-~~~~~~l~s~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 166 WSVKDGSNPRTLIGHR-----------------ATVTDIAI-IDRGRNVLSASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp EETTTCCCCEEEECCS-----------------SCEEEEEE-ETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred EeCCCCcCceEEcCCC-----------------CcEEEEEE-cCCCCEEEEEcCCCcEEEeECCCCcee
Confidence 98 333 45554321 13466774 455666666666788888887754443
No 181
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=91.53 E-value=3.9 Score=40.18 Aligned_cols=116 Identities=7% Similarity=-0.046 Sum_probs=69.9
Q ss_pred eEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCE
Q 011333 86 YSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMA 165 (488)
Q Consensus 86 ~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~r 165 (488)
..+++.+++.|.++. .++.|+.++.+.+. .+.+..-. ..|+ -..-+.|++.++|+++++=...+.
T Consensus 86 ~~~~~s~d~~l~~~s-~dg~v~lWd~~~~~--~~~~~~~~---~~~H---------~~~V~~v~~spdg~~l~sgs~d~~ 150 (344)
T 4gqb_B 86 ADLTWVGERGILVAS-DSGAVELWELDENE--TLIVSKFC---KYEH---------DDIVSTVSVLSSGTQAVSGSKDIC 150 (344)
T ss_dssp EEEEEETTTEEEEEE-TTSEEEEEEECTTS--SCEEEEEE---EECC---------SSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEeCCCeEEEEE-CCCEEEEEeccCCC--ceeEeecc---ccCC---------CCCEEEEEECCCCCEEEEEeCCCe
Confidence 578888888776654 46789998876432 11111100 0112 112467999999998887667788
Q ss_pred EEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 166 IRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 166 Irkid-~-gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
|+.++ . +. +.++.+-. ....++++......++++-...+.|+.++.....+
T Consensus 151 i~iwd~~~~~~~~~~~~h~-----------------~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 151 IKVWDLAQQVVLSSYRAHA-----------------AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP 204 (344)
T ss_dssp EEEEETTTTEEEEEECCCS-----------------SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC
T ss_pred EEEEECCCCcEEEEEcCcC-----------------CceEEEEecCCCCCceeeeccccccccccccccce
Confidence 99998 3 33 34443311 12356664343446777766678888888765443
No 182
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=91.46 E-value=4.1 Score=38.33 Aligned_cols=114 Identities=11% Similarity=0.069 Sum_probs=72.3
Q ss_pred CceEEEEccC----CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEE
Q 011333 84 EPYSVEVLPG----GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYI 158 (488)
Q Consensus 84 ~P~GIaVd~d----G~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYV 158 (488)
.-..+++.++ |.++++-..++.|+.++..... .+..+.+. -.....|++.+ ++++++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~----------------~~~i~~~~~~~~~~~~l~ 132 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ--CIKHYVGH----------------GNAINELKFHPRDPNLLL 132 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC--EEEEEESC----------------CSCEEEEEECSSCTTEEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce--EeeeecCC----------------CCcEEEEEECCCCCCEEE
Confidence 3467788777 6677776677899999987421 23333222 12356789998 888777
Q ss_pred EECCCCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 159 ADTMNMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 159 AD~~N~rIrkid--~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
+=...+.|+.++ .+.. ..+.... + .-....+++ ..+++.++++-..++.|+.+++..
T Consensus 133 s~~~dg~i~iwd~~~~~~~~~~~~~~-~-------------~~~~v~~~~-~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 133 SVSKDHALRLWNIQTDTLVAIFGGVE-G-------------HRDEVLSAD-YDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp EEETTSCEEEEETTTTEEEEEECSTT-S-------------CSSCEEEEE-ECTTSSEEEEEETTSCEEEEESCS
T ss_pred EEeCCCeEEEEEeecCeEEEEecccc-c-------------ccCceeEEE-ECCCCCEEEEecCCCCEEEEECCC
Confidence 766678899888 3333 3331100 0 112456787 566777666666678999998774
No 183
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=91.43 E-value=4 Score=39.52 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=68.5
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..|+++++|.++++-...+.|+.++.+......+.++.|. -..-..|++.++|+++++=...+
T Consensus 64 v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h----------------~~~v~~v~~sp~~~~l~s~s~D~ 127 (345)
T 3fm0_A 64 VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGH----------------ENEVKSVAWAPSGNLLATCSRDK 127 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCC----------------CCCceEEEEeCCCCEEEEEECCC
Confidence 46788999999877766677787777653211112223221 12346799999999888766677
Q ss_pred EEEEEc--CCC-cE---EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 165 AIRKIS--DSG-VT---TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 165 rIrkid--~gg-Vt---tIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
.|+.++ .+. .. ++.+. -.....++ ..+++.++++-...+.|+.++....
T Consensus 128 ~v~iwd~~~~~~~~~~~~~~~h-----------------~~~v~~~~-~~p~~~~l~s~s~d~~i~~w~~~~~ 182 (345)
T 3fm0_A 128 SVWVWEVDEEDEYECVSVLNSH-----------------TQDVKHVV-WHPSQELLASASYDDTVKLYREEED 182 (345)
T ss_dssp CEEEEEECTTSCEEEEEEECCC-----------------CSCEEEEE-ECSSSSCEEEEETTSCEEEEEEETT
T ss_pred eEEEEECCCCCCeEEEEEecCc-----------------CCCeEEEE-ECCCCCEEEEEeCCCcEEEEEecCC
Confidence 888877 222 22 22111 01235666 4566766666666777887776543
No 184
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.37 E-value=3.2 Score=39.73 Aligned_cols=116 Identities=14% Similarity=0.112 Sum_probs=69.0
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.-..++++++|.++++-...+.|+.++..... .+..+.+. .....+++.++|.++++-. .
T Consensus 198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~-----------------~~v~~~~~sp~~~~la~~~-~ 257 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGKDGEIMLWNLAAKK--AMYTLSAQ-----------------DEVFSLAFSPNRYWLAAAT-A 257 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTTE--EEEEEECC-----------------SCEEEEEECSSSSEEEEEE-T
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEecCC-----------------CcEEEEEEcCCCCEEEEEc-C
Confidence 34678888999988877777899999987521 22222211 1246799999997655543 3
Q ss_pred CEEEEEc-CCC--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 164 MAIRKIS-DSG--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 164 ~rIrkid-~gg--VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
..|+.++ +.. +..+.....+. ....-....+++ ..++|..+++-...+.|+.++..
T Consensus 258 ~~i~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~~~-~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 258 TGIKVFSLDPQYLVDDLRPEFAGY---------SKAAEPHAVSLA-WSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp TEEEEEEETTEEEEEEECCCCTTC---------CGGGCCCEEEEE-ECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCcEEEEeCcCeeeeccCcccccc---------ccCcCcceeEEE-ECCCCCEEEEeecCceEEEEEEe
Confidence 4566666 332 23332211100 000112345788 57788888877778888888753
No 185
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=91.15 E-value=3.5 Score=38.05 Aligned_cols=112 Identities=9% Similarity=-0.012 Sum_probs=66.4
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcc--cccEEEecCCCCccccCCCcccccccCCcceEEEcC--CCcEEEEE
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLY--SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIYIAD 160 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~--g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~--dG~LYVAD 160 (488)
-..|+++++|.++++-..++.|+.++...... ..+..+.+. -.....|++.+ +++++++=
T Consensus 14 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH----------------DSSIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC----------------SSCEEEEEECCGGGCSEEEEE
T ss_pred eeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccC----------------CCcEEEEEEcCCCCCCEEEEE
Confidence 46788899999777776778899988764210 011122221 12356788887 57776665
Q ss_pred CCCCEEEEEc-CCC-----------cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC--CeEEEEECCCCeEEEE
Q 011333 161 TMNMAIRKIS-DSG-----------VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS--CSLLVIDRGNRAIREI 226 (488)
Q Consensus 161 ~~N~rIrkid-~gg-----------VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~--G~LYVaD~gN~rIrkI 226 (488)
...+.|+.++ ..+ +.++.+. -....+++ ..++ +.++++-..++.|+.+
T Consensus 78 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~-~~~~~~~~~l~~~~~dg~v~iw 139 (351)
T 3f3f_A 78 SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS-----------------KGSLYSVK-FAPAHLGLKLACLGNDGILRLY 139 (351)
T ss_dssp ETTSCEEEEEECTTSCTTSSCSEEEEEEECCC-----------------SSCEEEEE-ECCGGGCSEEEEEETTCEEEEE
T ss_pred cCCCeEEEEecCCCcccccccCcceeeeeccc-----------------CCceeEEE-EcCCCCCcEEEEecCCCcEEEe
Confidence 5677788777 221 2222211 11245677 4555 6666665667888888
Q ss_pred EcCC
Q 011333 227 QLHF 230 (488)
Q Consensus 227 ~~~g 230 (488)
++..
T Consensus 140 d~~~ 143 (351)
T 3f3f_A 140 DALE 143 (351)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 8654
No 186
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=91.12 E-value=1.6 Score=43.06 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=50.2
Q ss_pred cceEEEcCCCcEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCC
Q 011333 145 PKGLTVDDRGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNR 221 (488)
Q Consensus 145 P~GIAvD~dG~LYVAD~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~ 221 (488)
-+.|++.++|.++++=...+.|+.++ ++. +.++..+- -...++|+ +.++|.++++-+..+
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH----------------~~~V~~v~-fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH----------------SFAITEVT-ISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS----------------SSCEEEEE-ECTTSCEEEEEETTS
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc----------------cCCEEEEE-ECCCCCEEEEEeCCC
Confidence 46789999999887766678899998 333 34443221 12347888 578899999988889
Q ss_pred eEEEEEcCC
Q 011333 222 AIREIQLHF 230 (488)
Q Consensus 222 rIrkI~~~g 230 (488)
.|+.+++..
T Consensus 335 tvrvw~ip~ 343 (365)
T 4h5i_A 335 TIHIIKLPL 343 (365)
T ss_dssp EEEEEECCT
T ss_pred eEEEEEcCC
Confidence 999999754
No 187
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.11 E-value=2.2 Score=42.87 Aligned_cols=115 Identities=13% Similarity=0.138 Sum_probs=69.3
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccc--cEEEecCCCCccccCCCcccccccCCcceEEEcCC---CcEEE
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSR--PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR---GNIYI 158 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~--i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d---G~LYV 158 (488)
.+..++++++|.++++-...+.|+.++........ ...+. ++ ......|++.++ |.+++
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~-------~h---------~~~v~~~~~sp~~~~~~~l~ 214 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPIL-------GH---------VSMLTDVHLIKDSDGHQFII 214 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSE-------EC---------SSCEEEEEEEECTTSCEEEE
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeee-------cc---------cCceEEEEEcCCCCCCcEEE
Confidence 56789999998855554457789999876421110 00111 11 234678999998 86665
Q ss_pred EECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 159 ADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 159 AD~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
+=...+.|+.++ .+. +.++..+. -....++++ . ++.++++-...+.|+.+++....
T Consensus 215 s~~~d~~i~vwd~~~~~~~~~~~~~h----------------~~~v~~~~~-s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 215 TSDRDEHIKISHYPQCFIVDKWLFGH----------------KHFVSSICC-G-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp EEETTSCEEEEEESCTTCEEEECCCC----------------SSCEEEEEE-C-STTEEEEEESSSEEEEEETTTCC
T ss_pred EEcCCCcEEEEECCCCceeeeeecCC----------------CCceEEEEE-C-CCCEEEEEeCCCeEEEEECCCCc
Confidence 554567888888 343 33333111 123467774 4 66666666677888888876543
No 188
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.07 E-value=3.2 Score=41.62 Aligned_cols=114 Identities=11% Similarity=0.055 Sum_probs=75.3
Q ss_pred CceEEEEcc-CCcEEEEECCCCeEEEEeCCCCc-ccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEE
Q 011333 84 EPYSVEVLP-GGELLILDSANSNLYRISSSLSL-YSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIAD 160 (488)
Q Consensus 84 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~-~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD 160 (488)
....|++.+ ++.++++....+.|+.++..... ...+..+.+. -..++.|++.+++. ++++-
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~----------------~~~v~~i~~~p~~~~~l~tg 296 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH----------------TAEVNCLSFNPYSEFILATG 296 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC----------------SSCEEEEEECSSCTTEEEEE
T ss_pred CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC----------------CCCeEEEEeCCCCCCEEEEE
Confidence 356788888 67788888888999999987421 0112222111 12367899999886 77776
Q ss_pred CCCCEEEEEc-CC-C--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 161 TMNMAIRKIS-DS-G--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 161 ~~N~rIrkid-~g-g--VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
...+.|+.++ .. + +.++.+.. ....+|++.+....++++-...++|+.+++..
T Consensus 297 ~~dg~v~vwd~~~~~~~~~~~~~h~-----------------~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 297 SADKTVALWDLRNLKLKLHSFESHK-----------------DEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ETTSEEEEEETTCTTSCSEEEECCS-----------------SCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred eCCCeEEEEeCCCCCCCeEEeecCC-----------------CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 6788999998 32 2 45554321 13467774443336788888888999998875
No 189
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=90.70 E-value=4.5 Score=39.90 Aligned_cols=116 Identities=16% Similarity=0.184 Sum_probs=67.3
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEEECCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADTMN 163 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVAD~~N 163 (488)
-..+++.++|..+++-...+.|+.++...+ ........ -.....+++.+ +|+++++-...
T Consensus 168 v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~---~~~~~~~~----------------~~~v~~~~~~~~~~~~l~~~s~d 228 (393)
T 1erj_A 168 IYSLDYFPSGDKLVSGSGDRTVRIWDLRTG---QCSLTLSI----------------EDGVTTVAVSPGDGKYIAAGSLD 228 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTT---EEEEEEEC----------------SSCEEEEEECSTTCCEEEEEETT
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEECCCC---eeEEEEEc----------------CCCcEEEEEECCCCCEEEEEcCC
Confidence 356777777776666666677777776642 22221111 11245688887 78888777778
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
+.|+.++ .+. +..+....... . ..-....+|+ +.++|.++++-...+.|+.+++..
T Consensus 229 ~~v~iwd~~~~~~~~~~~~~~~~~-~---------~h~~~v~~v~-~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 229 RAVRVWDSETGFLVERLDSENESG-T---------GHKDSVYSVV-FTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp SCEEEEETTTCCEEEEEC-------C---------CCSSCEEEEE-ECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEECCCCcEEEeecccccCC-C---------CCCCCEEEEE-ECCCCCEEEEEeCCCEEEEEECCC
Confidence 8899988 333 23331110000 0 0112346777 567777777777788898888764
No 190
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=90.65 E-value=2.3 Score=40.52 Aligned_cols=113 Identities=10% Similarity=-0.026 Sum_probs=68.2
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....+++.++|.++++-..++.|+.++.... ......-. .++ -.....+++.++|+++++=..+
T Consensus 54 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~----~~~---------~~~v~~~~~~~~~~~l~~~~~d 117 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR---TWKPTLVI----LRI---------NRAARCVRWAPNEKKFAVGSGS 117 (372)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEETT---EEEEEEEC----CCC---------SSCEEEEEECTTSSEEEEEETT
T ss_pred cccEEEEeCCCCEEEEEcCCCeEEEEECCCC---eeeeeEEe----ecC---------CCceeEEEECCCCCEEEEEeCC
Confidence 4568889999987777666788888887642 21111110 000 1236789999999866665556
Q ss_pred CEEEEEc--CCC----cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 164 MAIRKIS--DSG----VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 164 ~rIrkid--~gg----VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
+.|+.++ .+. ...+... .-....+++ +.+++.++++-...+.|+.++..
T Consensus 118 ~~v~i~d~~~~~~~~~~~~~~~~----------------~~~~i~~~~-~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 118 RVISICYFEQENDWWVCKHIKKP----------------IRSTVLSLD-WHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp SSEEEEEEETTTTEEEEEEECTT----------------CCSCEEEEE-ECTTSSEEEEEETTSCEEEEECC
T ss_pred CEEEEEEecCCCcceeeeeeecc----------------cCCCeeEEE-EcCCCCEEEEEcCCCCEEEEEcc
Confidence 7777766 333 1222111 012346777 56677766666667888888853
No 191
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=90.55 E-value=10 Score=37.04 Aligned_cols=142 Identities=11% Similarity=0.109 Sum_probs=73.9
Q ss_pred CceEEEEccCC-cEEEEECCCCeEEEEeCCCCcc-c-ccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEE
Q 011333 84 EPYSVEVLPGG-ELLILDSANSNLYRISSSLSLY-S-RPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 160 (488)
Q Consensus 84 ~P~GIaVd~dG-~LYVaD~~n~rI~kid~~g~~~-g-~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD 160 (488)
....++++++| .++++-...+.|+.++...... . .+.++.+.. .. . ...........-..|+++++|.++++-
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPE-DP-S--NRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC---------CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCC-Cc-c--ccccccccCceEEEEEECCCCCEEEEe
Confidence 35788999998 7888777788999999875220 0 023443321 00 0 000000001245689999999877765
Q ss_pred CCCCEEEEEc-C--CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 161 TMNMAIRKIS-D--SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 161 ~~N~rIrkid-~--gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
.. +.|+.++ . +. +.++.+..... .. .........+.....++ +.+++..+++-..++.|+.++.....+
T Consensus 304 ~~-~~v~iwd~~~~~~~~~~~~~~~~~~-~~-l~~~~~~~~i~~~~~~~-~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 304 DY-LSVKVWDLNMENRPVETYQVHEYLR-SK-LCSLYENDCIFDKFECC-WNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp ES-SEEEEEETTCCSSCSCCEESCGGGT-TT-HHHHHHTSGGGCCCCEE-ECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred eC-CeEEEEeCCCCccccceeecccccc-cc-ccccccccccccceEEE-ECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 55 8999998 2 33 44444321110 00 00000000111123466 455666556666677777777665433
No 192
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=90.52 E-value=2.3 Score=41.24 Aligned_cols=113 Identities=16% Similarity=0.157 Sum_probs=69.1
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..|+++|+|.++++-...+.|+.++..+... ....... .|+ -..-..|++.++|+++++=...+
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~-~~~~~~~-----~~h---------~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-ICKSVLS-----EGH---------QRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEE-EEEEEEC-----SSC---------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc-eeeeeec-----ccc---------CCcEEEEEECCCCCEEEEEECCC
Confidence 35788999999888877778898888764210 0111111 111 12246799999998777666667
Q ss_pred EEEEEc--CCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 165 AIRKIS--DSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 165 rIrkid--~gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
.|+.++ .+. +.++.+.. ....+|+ ..++++++++-...+.|+.+++..
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~-----------------~~v~~v~-~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHE-----------------NEVKSVA-WAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEEECT
T ss_pred cEEEEEccCCCeEEEEEccCCC-----------------CCceEEE-EeCCCCEEEEEECCCeEEEEECCC
Confidence 777766 333 22332211 1235677 466777777766677888887654
No 193
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=90.43 E-value=6.7 Score=36.00 Aligned_cols=109 Identities=12% Similarity=0.064 Sum_probs=67.0
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....+++.++|.|+ +-..++.|+.++..... .+..+.+. -.....|++.++|.|+.+. ..
T Consensus 186 ~i~~~~~~~~~~~~-~~~~dg~i~i~d~~~~~--~~~~~~~~----------------~~~i~~~~~~~~~~l~~~~-~d 245 (313)
T 3odt_A 186 VVRHLAVVDDGHFI-SCSNDGLIKLVDMHTGD--VLRTYEGH----------------ESFVYCIKLLPNGDIVSCG-ED 245 (313)
T ss_dssp CEEEEEEEETTEEE-EEETTSEEEEEETTTCC--EEEEEECC----------------SSCEEEEEECTTSCEEEEE-TT
T ss_pred cEEEEEEcCCCeEE-EccCCCeEEEEECCchh--hhhhhhcC----------------CceEEEEEEecCCCEEEEe-cC
Confidence 45677788888844 44456788888876421 22233221 1235689999999766655 47
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
+.|+.++ .+. +.++.+.. ....+++ ..+++.++++ ...+.|+.+++...
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~-----------------~~i~~~~-~~~~~~~~~~-~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPA-----------------ISIWSVD-CMSNGDIIVG-SSDNLVRIFSQEKS 297 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSS-----------------SCEEEEE-ECTTSCEEEE-ETTSCEEEEESCGG
T ss_pred CEEEEEECCCCceeEEEeccC-----------------ceEEEEE-EccCCCEEEE-eCCCcEEEEeCCCC
Confidence 8899998 344 34443211 1245777 5667776554 45678888887653
No 194
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=90.34 E-value=2.4 Score=41.19 Aligned_cols=114 Identities=9% Similarity=0.045 Sum_probs=70.0
Q ss_pred CceEEEEccCC-cEEEEECCCC---eEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEE
Q 011333 84 EPYSVEVLPGG-ELLILDSANS---NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYI 158 (488)
Q Consensus 84 ~P~GIaVd~dG-~LYVaD~~n~---rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYV 158 (488)
....++++++| .++++-...+ .|+.++..... ..+..+. .++ -.....|++.+ ++++++
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~------~~~---------~~~v~~~~~s~~~~~~l~ 279 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-TPLQTLN------QGH---------QKGILSLDWCHQDEHLLL 279 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-SCSBCCC------SCC---------SSCEEEEEECSSCSSCEE
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-CCcEEee------cCc---------cCceeEEEeCCCCCCeEE
Confidence 45677888876 4555554454 77777766321 0111111 011 12357899998 888777
Q ss_pred EECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCCC
Q 011333 159 ADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 159 AD~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~gN~rIrkI~~~g~ 231 (488)
+-...+.|+.++ .+. +.++.+.. ....+++ ..+++ .++++-...+.|+.+++...
T Consensus 280 s~~~dg~v~~wd~~~~~~~~~~~~~~-----------------~~v~~~~-~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 280 SSGRDNTVLLWNPESAEQLSQFPARG-----------------NWCFKTK-FAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEESSSEEEEECSSSCCEEEEEECSS-----------------SCCCCEE-ECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred EEeCCCCEEEeeCCCCccceeecCCC-----------------CceEEEE-ECCCCCCEEEEEecCCcEEEEEccCC
Confidence 766788999999 333 44444321 1345778 45566 78888777889999988753
No 195
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.28 E-value=2.3 Score=42.62 Aligned_cols=113 Identities=9% Similarity=-0.040 Sum_probs=71.2
Q ss_pred ceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 85 PYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 85 P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
-..|++.| +++++++-...+.|+.++..+ +.+.++.... . .-..-..++++++|.++++=...
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEGTTRLQDFKG---NILRVFASSD-T------------INIWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSSCEEEEETTS---CEEEEEECCS-S------------CSCCCCCEEEETTTTEEEEECSS
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEeeccC---CceeEEeccC-C------------CCccEEEEEECCCCCEEEEEeCC
Confidence 36888987 688888877788999999875 3344444321 0 01123568899999988877777
Q ss_pred CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 164 MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 164 ~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
+.|+.++ .+. +.++.+. -..-.+|++.+....++++-...+.|+.+++..
T Consensus 231 g~i~~wd~~~~~~~~~~~h-----------------~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 231 GNVILLNMDGKELWNLRMH-----------------KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp SBEEEEESSSCBCCCSBCC-----------------SSCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred CcEeeeccCcceeEEEecc-----------------cceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 8888888 433 2222111 112356774333345666666677888887754
No 196
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=90.17 E-value=4.5 Score=38.87 Aligned_cols=113 Identities=7% Similarity=-0.045 Sum_probs=72.0
Q ss_pred ceEEEEcc--CCcEEEEECCCCeEEEEeCCCCcccccEEEe-cCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 85 PYSVEVLP--GGELLILDSANSNLYRISSSLSLYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 85 P~GIaVd~--dG~LYVaD~~n~rI~kid~~g~~~g~i~tva-G~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
-..+++++ +|.++++-...+.|+.++...+ ....+. +.. -.....+++.++|.++++=.
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~---~~~~~~~~~~---------------~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD---SQYIVHSAKS---------------DVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSS---CEEEEECCCS---------------SCCCCEEEECTTSCEEEEEC
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC---cEEEEEecCC---------------CCceEEEEECCCCCEEEEEc
Confidence 56788888 8998887777889999998752 222222 110 11256899999999888866
Q ss_pred CCCEEEEEc--CCC-c-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 162 MNMAIRKIS--DSG-V-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 162 ~N~rIrkid--~gg-V-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
.++.|+.+| .+. + .++.++. -....+|+ +.++|..+++-..+ .|+.+++....+
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h----------------~~~v~~l~-fs~~g~~l~s~~~~-~v~iwd~~~~~~ 247 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDE----------------EAKIKEVK-FADNGYWMVVECDQ-TVVCFDLRKDVG 247 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCT----------------TSCEEEEE-ECTTSSEEEEEESS-BEEEEETTSSTT
T ss_pred CCCEEEEEECCCCCCCccEEeccC----------------CCCEEEEE-EeCCCCEEEEEeCC-eEEEEEcCCCCc
Confidence 788999998 333 3 3333210 11346788 45666655554443 899999876433
No 197
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.00 E-value=4.1 Score=40.81 Aligned_cols=121 Identities=11% Similarity=0.028 Sum_probs=74.1
Q ss_pred CceEEEEccC-CcEEEEECCCCeEEEEeCCCC--------cccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC
Q 011333 84 EPYSVEVLPG-GELLILDSANSNLYRISSSLS--------LYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 154 (488)
Q Consensus 84 ~P~GIaVd~d-G~LYVaD~~n~rI~kid~~g~--------~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG 154 (488)
.+..|++.++ +.++++-..++.|+.++.... ....+..+.+. -....+|++++++
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h----------------~~~v~~l~~~~~~ 193 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH----------------QKEGYGLSWNPNL 193 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC----------------SSCCCCEEECTTS
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC----------------CCCeEEEEeCCCC
Confidence 6788999996 678887777888999887531 00122222221 1235789999988
Q ss_pred c-EEEEECCCCEEEEEc-CC-C-c-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 155 N-IYIADTMNMAIRKIS-DS-G-V-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 155 ~-LYVAD~~N~rIrkid-~g-g-V-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
. ++++=...+.|+.++ .. . . ..+...... ...-....+|++.+.++.++++....+.|+.+++.
T Consensus 194 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-----------~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKNIF-----------TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp TTEEEEECTTSCEEEEETTSCCBGGGEEECSEEE-----------CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CCeEEEEeCCCeEEEEeCCCCCCCCceeccceee-----------cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 7 777776778888888 22 1 1 111000000 00112356777544477888888888999999887
Q ss_pred CC
Q 011333 230 FD 231 (488)
Q Consensus 230 g~ 231 (488)
..
T Consensus 263 ~~ 264 (430)
T 2xyi_A 263 NN 264 (430)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 198
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=89.91 E-value=2.9 Score=39.61 Aligned_cols=112 Identities=9% Similarity=-0.028 Sum_probs=61.4
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC--CcEEEEECC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR--GNIYIADTM 162 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d--G~LYVAD~~ 162 (488)
-..++++++|.++++-..++.|+.++........+..+.+. -..-..|++.++ ++++++=..
T Consensus 14 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH----------------EGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC----------------SSCEEEEEECCGGGCSEEEEEET
T ss_pred EEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCC----------------CCcEEEEEeCCCCCCCEEEEecc
Confidence 45788889998777766677888887653211112222221 112356777655 776665555
Q ss_pred CCEEEEEc--CCCc---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC--CeEEEEECCCCeEEEEEcCC
Q 011333 163 NMAIRKIS--DSGV---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS--CSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 163 N~rIrkid--~ggV---ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~--G~LYVaD~gN~rIrkI~~~g 230 (488)
++.|+.++ .+.. ..+.+. -....+++ +.++ +.++++-..++.|+.+++..
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~-----------------~~~v~~~~-~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVH-----------------SASVNSVQ-WAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCC-----------------SSCEEEEE-ECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred CCEEEEEEcCCCceeEeeeecCC-----------------CcceEEEE-eCCCCCCCEEEEecCCCcEEEEecCC
Confidence 67777777 4432 222111 01234556 3444 55555555566677766654
No 199
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=89.69 E-value=2.3 Score=40.89 Aligned_cols=112 Identities=9% Similarity=0.010 Sum_probs=64.9
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCc-ccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSL-YSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~-~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
-..+++.++|+++++-...+.|+.++..... ......+.+. -.....|++.++|+++++=...
T Consensus 58 v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 58 VTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL----------------NRAATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp EEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCC----------------SSCEEEEECCTTSSCCEEEESS
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc----------------CCceEEEEECCCCCEEEEEecC
Confidence 4678889999877776667788888876421 0012222111 1235678888888766655557
Q ss_pred CEEEEEc--CCC----cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 164 MAIRKIS--DSG----VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 164 ~rIrkid--~gg----VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
+.|+.++ .+. +..+.+.. -....+|+ ..+++.++++-...+.|+.+++.
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~h----------------~~~v~~~~-~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 122 RVISVCYFEQENDWWVSKHLKRPL----------------RSTILSLD-WHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SCEEECCC-----CCCCEEECSSC----------------CSCEEEEE-ECTTSSEEEEEESSSCEEEEEEC
T ss_pred CeEEEEEECCcccceeeeEeeccc----------------CCCeEEEE-EcCCCCEEEEEeCCCEEEEEEEE
Confidence 7788877 222 33333211 11346777 56677777776667888888875
No 200
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=89.62 E-value=9 Score=34.42 Aligned_cols=72 Identities=11% Similarity=0.053 Sum_probs=41.6
Q ss_pred cceEEEcCCCcEEEEECCCCEEEEEc-CC--CcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEEC--
Q 011333 145 PKGLTVDDRGNIYIADTMNMAIRKIS-DS--GVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDR-- 218 (488)
Q Consensus 145 P~GIAvD~dG~LYVAD~~N~rIrkid-~g--gVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaD~-- 218 (488)
...++++++|+.+++.. +..|+.++ .+ ....+..... -....++++ .++|. |+++..
T Consensus 44 v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~---------------~~~~~~~~~-spdg~~l~~~~~~~ 106 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFA---------------TICNNDHGI-SPDGALYAISDKVE 106 (297)
T ss_dssp CEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTC---------------CCBCSCCEE-CTTSSEEEEEECTT
T ss_pred eEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccc---------------cccccceEE-CCCCCEEEEEEeCC
Confidence 56799999998555543 67888888 33 3443332110 012456674 44554 444442
Q ss_pred -CCCeEEEEEcCCCce
Q 011333 219 -GNRAIREIQLHFDDC 233 (488)
Q Consensus 219 -gN~rIrkI~~~g~~~ 233 (488)
+..+|+.++..+...
T Consensus 107 ~~~~~l~~~~~~~~~~ 122 (297)
T 2ojh_A 107 FGKSAIYLLPSTGGTP 122 (297)
T ss_dssp TSSCEEEEEETTCCCC
T ss_pred CCcceEEEEECCCCce
Confidence 357888888765433
No 201
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=89.49 E-value=7.2 Score=36.40 Aligned_cols=116 Identities=13% Similarity=0.072 Sum_probs=65.0
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..|+++++|.++++-...+.|+.++..... .+..+.+. .....+++.+++.+.++- ..+
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~--~~~~~~~~-----------------~~v~~~~~~~~~~~~~~~-~d~ 277 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGG-----------------DIINALCFSPNRYWLCAA-TGP 277 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTE--EEEEEECS-----------------SCEEEEEECSSSSEEEEE-ETT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEeccCc--eeeeecCC-----------------ceEEeeecCCCCceeecc-CCC
Confidence 3567788888877776667788888876421 22222111 123567777777666554 357
Q ss_pred EEEEEc-CCC--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 165 AIRKIS-DSG--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 165 rIrkid-~gg--VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
.|+.++ .++ +..+....... .....-..-.+|+ +.++|.++++-...+.|+.+++.
T Consensus 278 ~i~iwd~~~~~~~~~~~~~~~~~--------~~~~h~~~v~~l~-~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 278 SIKIWDLEGKIIVDELKQEVIST--------SSKAEPPQCTSLA-WSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp EEEEEETTTTEEEEEECCC---------------CCCCCEEEEE-ECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEEECCCCeEEEeccccceee--------eccCCCCCEEEEE-ECCCCCEEEEEeCCCEEEEEeCC
Confidence 788887 333 22222110000 0011112336777 57788877777677888888764
No 202
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=89.43 E-value=12 Score=33.68 Aligned_cols=69 Identities=23% Similarity=0.275 Sum_probs=42.9
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCC-CcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcE-EEEEC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSL-SLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNI-YIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g-~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~L-YVAD~ 161 (488)
....++++++|.++++.. .+.|+.++..+ +. ...+... . .-.....+++.++|.. +++..
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~---~~~~~~~---~-----------~~~~~~~~~~spdg~~l~~~~~ 104 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS---PEKVDTG---F-----------ATICNNDHGISPDGALYAISDK 104 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS---CEECCCT---T-----------CCCBCSCCEECTTSSEEEEEEC
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC---ceEeccc---c-----------ccccccceEECCCCCEEEEEEe
Confidence 467889999999665543 56999999875 32 2222111 0 0123567899999974 44432
Q ss_pred ---CCCEEEEEc
Q 011333 162 ---MNMAIRKIS 170 (488)
Q Consensus 162 ---~N~rIrkid 170 (488)
...+|..++
T Consensus 105 ~~~~~~~l~~~~ 116 (297)
T 2ojh_A 105 VEFGKSAIYLLP 116 (297)
T ss_dssp TTTSSCEEEEEE
T ss_pred CCCCcceEEEEE
Confidence 257788887
No 203
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=89.40 E-value=2.4 Score=44.91 Aligned_cols=117 Identities=9% Similarity=0.027 Sum_probs=68.9
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
+..++++|||.++++-..++.|+.++..+.....+.. .+. -...+.|++.++|.++++-...+
T Consensus 451 v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h----------------~~~v~~v~fspdg~~las~s~d~ 513 (611)
T 1nr0_A 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVH----------------PAEITSVAFSNNGAFLVATDQSR 513 (611)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EEC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred ceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCC----------------CCceEEEEECCCCCEEEEEcCCC
Confidence 4566677777766666566677776655311000011 111 12356899999999888776778
Q ss_pred EEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 165 AIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 165 rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
.|+.++ ...-..+.....+ + .-...++|+ +.++|.++++-...+.|+.++....
T Consensus 514 ~v~~w~~~~~~~~~~~~~~~---~---------H~~~V~~v~-fspdg~~lasgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 514 KVIPYSVANNFELAHTNSWT---F---------HTAKVACVS-WSPDNVRLATGSLDNSVIVWNMNKP 568 (611)
T ss_dssp CEEEEEGGGTTEESCCCCCC---C---------CSSCEEEEE-ECTTSSEEEEEETTSCEEEEETTCT
T ss_pred CEEEEEcCCCCceeeeeeee---e---------cccceeEEE-ECCCCCEEEEEECCCcEEEEECCCc
Confidence 888888 3211111100000 0 112346788 5778888888777889999998753
No 204
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=89.32 E-value=9.7 Score=37.35 Aligned_cols=114 Identities=9% Similarity=0.001 Sum_probs=66.8
Q ss_pred CceEEEEccCC-cEEEEEC--CCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEE-
Q 011333 84 EPYSVEVLPGG-ELLILDS--ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA- 159 (488)
Q Consensus 84 ~P~GIaVd~dG-~LYVaD~--~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVA- 159 (488)
....+++.++| .|+++-. ..+.|+.++...+ ........ -.....+++.++|..+++
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~---~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG---ARVNTVDA----------------GSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC---CEEEEEEC----------------SSCEEEEEECSSSSEEEEE
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC---CEEEEEeC----------------CCcEEEEEECCCCCeEEEE
Confidence 34567777755 4555543 4677777776542 22222111 123568999999987666
Q ss_pred -ECCCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 160 -DTMNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 160 -D~~N~rIrkid--~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
-..++.|+.++ .+....+..... .-....+++ +.+++.++++-..++.|+.++....
T Consensus 322 ~g~~dg~i~v~~~~~~~~~~~~~~~~--------------h~~~v~~~~-~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 322 HGFPDNNLSIWSYSSSGLTKQVDIPA--------------HDTRVLYSA-LSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp ECTTTCEEEEEEEETTEEEEEEEEEC--------------CSSCCCEEE-ECTTSSEEEEECTTSEEEEEECCC-
T ss_pred eecCCCcEEEEecCCccceeEEEecC--------------CCCCEEEEE-ECCCCCEEEEEeCCCcEEEEECCCC
Confidence 33578888888 333322211000 011346777 5677877777777888998887653
No 205
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=89.24 E-value=3.5 Score=40.41 Aligned_cols=112 Identities=13% Similarity=0.037 Sum_probs=67.4
Q ss_pred CceEEEEccC-CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC-cEEEEEC
Q 011333 84 EPYSVEVLPG-GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~d-G~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~LYVAD~ 161 (488)
.+..|++.|+ +.++++-..++.|+.++..... .+.++.+. -..-+.|++.++| .+.++=.
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~--~~~~~~~~----------------~~~v~~l~~sp~~~~~lasgs 289 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD--SAQTSAVH----------------SQNITGLAYSYHSSPFLASIS 289 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGG--GCEEECCC----------------SSCEEEEEECSSSSCCEEEEE
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCc--EeEEEecc----------------ceeEEEEEEcCCCCCEEEEEe
Confidence 3567888876 4566665567788888876421 23333322 1123578888877 4444444
Q ss_pred CCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 162 MNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 162 ~N~rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
..+.|+.++ . +.+....+-. ...++|++.+.++.++++-...+.|+.+++..
T Consensus 290 ~D~~i~iwd~~~~~~~~~~~H~-----------------~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 290 EDCTVAVLDADFSEVFRDLSHR-----------------DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp TTSCEEEECTTSCEEEEECCCS-----------------SCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred CCCEEEEEECCCCcEeEECCCC-----------------CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 467888888 3 3333332211 12467885445777777777778888888753
No 206
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=89.01 E-value=9.9 Score=37.30 Aligned_cols=111 Identities=11% Similarity=0.038 Sum_probs=63.8
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC-cEEEEEC-
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADT- 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~LYVAD~- 161 (488)
...++++.++|.++++-...+.|+.++..... .+..+.+. -.....|++.++| .++++-.
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~----------------~~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARSSI--PKFTKTNH----------------NAAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCSS--EEEEECCC----------------SSCCCEEEECTTSTTEEEEECC
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC--ccEEecCC----------------cceEEEEEECCCCCCEEEEecC
Confidence 34567777777766665556677777766421 11222111 1235689999876 5666643
Q ss_pred -CCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEE--ECCCCeEEEEEcCCC
Q 011333 162 -MNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVI--DRGNRAIREIQLHFD 231 (488)
Q Consensus 162 -~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVa--D~gN~rIrkI~~~g~ 231 (488)
..+.|+.++ .+. +.++... ....+++ ..+++..+++ ...++.|+.++....
T Consensus 281 s~d~~i~i~d~~~~~~~~~~~~~------------------~~v~~~~-~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVNTVDAG------------------SQVTSLI-WSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp TTTCEEEEEETTTCCEEEEEECS------------------SCEEEEE-ECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred CCCCEEEEEECCCCCEEEEEeCC------------------CcEEEEE-ECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 578899998 333 3333221 1245666 4555555554 335677777776653
No 207
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=88.58 E-value=7.6 Score=36.54 Aligned_cols=111 Identities=8% Similarity=0.036 Sum_probs=64.1
Q ss_pred eEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC--CCcEEEEECCC
Q 011333 86 YSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIYIADTMN 163 (488)
Q Consensus 86 ~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~--dG~LYVAD~~N 163 (488)
..++++++|.++++-..++.|+.++.++.....+.++.|. . + .-..|++.+ +|+++++=...
T Consensus 13 ~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH----~----~--------~V~~v~~s~~~~g~~l~s~s~D 76 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGH----E----G--------PVWRVDWAHPKFGTILASCSYD 76 (297)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCC----S----S--------CEEEEEECCGGGCSEEEEEETT
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccc----c----C--------CeEEEEecCCCcCCEEEEEcCC
Confidence 5788999999888877788899998763211123344332 1 1 134577754 37777766667
Q ss_pred CEEEEEc-C-CC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC--CeEEEEECCCCeEEEEEcCC
Q 011333 164 MAIRKIS-D-SG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS--CSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 164 ~rIrkid-~-gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~--G~LYVaD~gN~rIrkI~~~g 230 (488)
+.|+..+ . +. +.++.+.. ....+|++ .++ |.++++-...+.|+.++...
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~-----------------~~v~~v~~-~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHS-----------------ASVNSVQW-APHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCS-----------------SCEEEEEE-CCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred CEEEEEEcCCCceEEEEEeecCC-----------------CceeEEEe-CcCCCCcEEEEEECCCcEEEEEecC
Confidence 8888887 2 22 23332211 12345663 333 55555555567777777653
No 208
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=88.46 E-value=9.9 Score=36.94 Aligned_cols=112 Identities=11% Similarity=0.035 Sum_probs=69.7
Q ss_pred eEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC--CCcEEEEECCC
Q 011333 86 YSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIYIADTMN 163 (488)
Q Consensus 86 ~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~--dG~LYVAD~~N 163 (488)
..+++.+++..+++-...+.|+.++...+. .+..+.|.. .....+++.+ +|+++++=...
T Consensus 158 ~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~--~~~~~~~h~----------------~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 158 SACSFTNSDMQILTASGDGTCALWDVESGQ--LLQSFHGHG----------------ADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCS----------------SCEEEEEECCCSSCCEEEEEETT
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEcCCC----------------CCeEEEEEEeCCCCCEEEEEeCC
Confidence 567788888877777778899999987532 233443321 1123455554 56766666667
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
+.|+.++ .+. +.++.+.. ....+|+ +.+++.++++-...+.|+.+++....+
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~-----------------~~v~~v~-~~p~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHE-----------------SDVNSVR-YYPSGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CeEEEEECCCCcEEEEecCCC-----------------CCeEEEE-EeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 8888888 333 33332211 1235677 566777777777778888888875433
No 209
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=88.43 E-value=10 Score=36.10 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=67.7
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC------CCcEEE
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD------RGNIYI 158 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~------dG~LYV 158 (488)
-..+++++++.++++-...+.|+.++..+ ..+..+.+.. ..-..+++.+ ++.+++
T Consensus 110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~~---~~~~~~~~h~----------------~~v~~~~~~~~~~~~~~~~~l~ 170 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDKTIKVWTIKG---QCLATLLGHN----------------DWVSQVRVVPNEKADDDSVTII 170 (319)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTS---CEEEEECCCS----------------SCEEEEEECCC------CCEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCC---CeEEEEeccC----------------CcEEEEEEccCCCCCCCccEEE
Confidence 46788888888888877778899998875 2334443321 1123344443 344566
Q ss_pred EECCCCEEEEEcC--CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 011333 159 ADTMNMAIRKISD--SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 159 AD~~N~rIrkid~--ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~ 234 (488)
+-...+.|+.++- ... ..+.+.. .....++ +.++|.++++-...+.|+.++.....+.
T Consensus 171 s~~~d~~i~~wd~~~~~~~~~~~~h~-----------------~~v~~~~-~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 171 SAGNDKMVKAWNLNQFQIEADFIGHN-----------------SNINTLT-ASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCC-----------------SCEEEEE-ECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEeCCCEEEEEECCcchhheeecCCC-----------------CcEEEEE-EcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 6556777888872 222 2222211 1235677 5667777777767788888888765443
No 210
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.20 E-value=6.9 Score=44.61 Aligned_cols=115 Identities=9% Similarity=0.040 Sum_probs=70.5
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.-..++++++|.++++-..++.|+.++...+. .+..+.+. -.....++++++|.+.++=...
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~--~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~~~d 678 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADKTLQVFKAETGE--KLLDIKAH----------------EDEVLCCAFSSDDSYIATCSAD 678 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCCCC--EEEEeccC----------------CCCEEEEEEecCCCEEEEEeCC
Confidence 34678899999988877777899999987532 23333221 1235679999999877776667
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEEEECCCCeEEEEEcCCCce
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~-~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
+.|+.++ .+. +.++.+... ...++++.+. ++.++++-...+.|+.++.....+
T Consensus 679 ~~v~vwd~~~~~~~~~~~~~~~-----------------~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~ 735 (1249)
T 3sfz_A 679 KKVKIWDSATGKLVHTYDEHSE-----------------QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC 735 (1249)
T ss_dssp SEEEEEETTTCCEEEEEECCSS-----------------CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE
T ss_pred CeEEEEECCCCceEEEEcCCCC-----------------cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch
Confidence 8899998 344 444443211 1234453222 334555555566666666654433
No 211
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.03 E-value=17 Score=38.83 Aligned_cols=112 Identities=11% Similarity=0.029 Sum_probs=67.6
Q ss_pred ceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC--CCcEEEEEC
Q 011333 85 PYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIYIADT 161 (488)
Q Consensus 85 P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~--dG~LYVAD~ 161 (488)
...+++++ +|.++++-..++.|+.++..... ....+.+.. -.....+++.+ +|.++++=.
T Consensus 143 v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~---------------~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLGQST--PNFTLTTGQ---------------ERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEETTCSS--CSEEEECCC---------------TTCCCEEEECCSTTCCEEEEEC
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--ceeEEecCC---------------CCCEEEEEEEECCCCCEEEEEe
Confidence 46777877 77777766667788888875421 222222210 12345688887 888777777
Q ss_pred CCCEEEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 162 MNMAIRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 162 ~N~rIrkid-~-gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
.++.|+.++ . +. +.++.+.. ....+++ ..+++.++++-...+.|+.++....
T Consensus 206 ~dg~i~~~d~~~~~~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 206 DDLTIKIWDYQTKSCVATLEGHM-----------------SNVSFAV-FHPTLPIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEETTTC
T ss_pred CCCEEEEEECCCCcEEEEEcCCC-----------------CCEEEEE-EcCCCCEEEEEeCCCeEEEEECCCC
Confidence 788999998 3 33 34443211 1234566 4556666666556677777776643
No 212
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=87.52 E-value=3.3 Score=38.92 Aligned_cols=114 Identities=11% Similarity=0.033 Sum_probs=67.8
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcc-cccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEEC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLY-SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~-g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~ 161 (488)
.-..++++++|.++++-...+.|+.++...... ..+..+.+. -.....+++.++|+ ++++=.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY----------------KHPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC----------------SSCEEEEEEEESSSEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeec----------------CCceEEEEECCCCCcEEEEEc
Confidence 346788889988777666678888888764210 002223221 12356789999998 555544
Q ss_pred CCCEEEEEcC-CC--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 162 MNMAIRKISD-SG--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 162 ~N~rIrkid~-gg--VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
..+.|+.++- .. ..++.+.. .-....+|++.+ +.++++-...+.|+.+++..
T Consensus 77 ~dg~i~~wd~~~~~~~~~~~~~~---------------~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSFQALTNNE---------------ANLGICRICKYG--DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp TTSCEEEECSSSSSSEEECBSCC---------------CCSCEEEEEEET--TTEEEEEETTSEEEEECHHH
T ss_pred CCCeEEEEEeccCCceEeccccC---------------CCCceEEEEeCC--CCEEEEEcCCCeEEEEcccc
Confidence 5778888873 32 33332200 011345777544 55666666678888888663
No 213
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=87.48 E-value=8.4 Score=37.70 Aligned_cols=128 Identities=9% Similarity=0.029 Sum_probs=73.6
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEec-CCCCccccCCCcccccccCCcceEEEcCCC-cEEEEEC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAG-SAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG-~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~LYVAD~ 161 (488)
....+++.++|.++++- ..+.|+.++.... +....+.. ......++ -.....++++++| +++++=.
T Consensus 179 ~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~---------~~~v~~~~~~p~~~~~l~s~~ 246 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-DDLRINLWHLEIT--DRSFNIVDIKPANMEEL---------TEVITAAEFHPNSCNTFVYSS 246 (447)
T ss_dssp CCCEEEECTTSSEEEEE-CSSEEEEEETTEE--EEEEEEEECCCSSGGGC---------CCCEEEEEECSSCTTEEEEEE
T ss_pred ceEEEEEcCCCCEEEEe-CCCeEEEEECCCC--Cceeeeeeccccccccc---------CcceEEEEECCCCCcEEEEEe
Confidence 45689999999988876 6889999998721 11111111 10011111 2246789999998 7777776
Q ss_pred CCCEEEEEc--CCC-----cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 162 MNMAIRKIS--DSG-----VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 162 ~N~rIrkid--~gg-----VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
..+.|+.++ .+. +.++.+..... .............+|+ +.++|.++++-.. +.|+.+++..
T Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~-~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 247 SKGTIRLCDMRASALCDRHSKLFEEPEDPS-----NRSFFSEIISSISDVK-FSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TTSCEEEEETTTCSSSCTTCEEECCC----------CCHHHHHTTCEEEEE-ECTTSSEEEEEES-SEEEEEETTC
T ss_pred CCCeEEEEECcCCccccceeeEeccCCCcc-----ccccccccCceEEEEE-ECCCCCEEEEeeC-CeEEEEeCCC
Confidence 788899988 333 24443221000 0000000011346777 5667776666655 8999998864
No 214
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=87.40 E-value=18 Score=38.03 Aligned_cols=138 Identities=12% Similarity=0.042 Sum_probs=76.8
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..+++.|+|.++++-...+.|+.++...+. .+.++........|+ -....+|++.++|.++++=...+
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~--~~~~~~~~~~~~~~h---------~~~V~~v~~spdg~~l~s~s~D~ 261 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGT--KTGVFEDDSLKNVAH---------SGSVFGLTWSPDGTKIASASADK 261 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEECBCTTSSSCSS---------SSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCc--Eeeeecccccccccc---------CCCEEEEEECCCCCEEEEEeCCC
Confidence 4678888899888887777888888865421 122221100000022 12357899999999888777778
Q ss_pred EEEEEc-C-CC-cEEEeCCccCC-------------CCCCCCCCc-------------ccccCCCCCeeEEECCCCeEEE
Q 011333 165 AIRKIS-D-SG-VTTIAGGKWGR-------------GGGHVDGPS-------------EDAKFSNDFDVVYIGSSCSLLV 215 (488)
Q Consensus 165 rIrkid-~-gg-VttIaGg~~g~-------------~~g~~dG~~-------------~~a~f~~P~gIa~vd~~G~LYV 215 (488)
.|+.++ . +. +.++..+.... -.+..||.. ....-....+|+ +.++|..++
T Consensus 262 ~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~-~spdg~~l~ 340 (611)
T 1nr0_A 262 TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS-SSADGKTLF 340 (611)
T ss_dssp EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE-ECTTSSEEE
T ss_pred eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE-EeCCCCEEE
Confidence 899888 3 33 33332210000 000001100 001112345677 566777777
Q ss_pred EECCCCeEEEEEcCCCceE
Q 011333 216 IDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 216 aD~gN~rIrkI~~~g~~~~ 234 (488)
+-...+.|+.++.....+.
T Consensus 341 s~s~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 341 SADAEGHINSWDISTGISN 359 (611)
T ss_dssp EEETTSCEEEEETTTCCEE
T ss_pred EEeCCCcEEEEECCCCcee
Confidence 6667788998888765443
No 215
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=87.36 E-value=6.9 Score=39.21 Aligned_cols=117 Identities=10% Similarity=0.031 Sum_probs=69.9
Q ss_pred CceEEEEccCCcE-EEEECCCCeEEEEeCC--CCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEE
Q 011333 84 EPYSVEVLPGGEL-LILDSANSNLYRISSS--LSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 160 (488)
Q Consensus 84 ~P~GIaVd~dG~L-YVaD~~n~rI~kid~~--g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD 160 (488)
....++++++|.. +++-...+.|+.++.. ++ ..+..+.+. + .-..+..|+++++|..+++=
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~--~~~~~~~~~-----~---------~~~~v~~~~~sp~~~~l~~~ 167 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK--NVLKLRKRF-----C---------FSKRPNAISIAEDDTTVIIA 167 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS--SCEEEEEEE-----E---------CSSCEEEEEECTTSSEEEEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC--ceeeeeecc-----c---------CCCCceEEEEcCCCCEEEEE
Confidence 4578999999986 4666667888888866 42 123333211 0 01246789999999744443
Q ss_pred CCCCEEEEEc--CCCcE-----EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC---CeEEEEECCCCeEEEEEcCC
Q 011333 161 TMNMAIRKIS--DSGVT-----TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS---CSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 161 ~~N~rIrkid--~ggVt-----tIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~---G~LYVaD~gN~rIrkI~~~g 230 (488)
.....|+.++ ++... ++.+ .-....+|++ .++ +.++++-...+.|+.+++..
T Consensus 168 ~~~g~v~~~~~~~~~~~~~~~~~~~~-----------------h~~~v~~~~~-sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEKFTQEPILG-----------------HVSMLTDVHL-IKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp ETTSEEEEEETTSCCCSSCCCCCSEE-----------------CSSCEEEEEE-EECTTSCEEEEEEETTSCEEEEEESC
T ss_pred eCCCcEEEEecCCcccccccceeeec-----------------ccCceEEEEE-cCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 3477788887 22211 1111 1123567774 455 66666656678899988875
Q ss_pred CceE
Q 011333 231 DDCA 234 (488)
Q Consensus 231 ~~~~ 234 (488)
..+.
T Consensus 230 ~~~~ 233 (450)
T 2vdu_B 230 CFIV 233 (450)
T ss_dssp TTCE
T ss_pred Ccee
Confidence 4443
No 216
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=87.31 E-value=2.7 Score=39.58 Aligned_cols=109 Identities=11% Similarity=0.035 Sum_probs=64.8
Q ss_pred EccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC---CCcEEEEECCCCEE
Q 011333 90 VLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD---RGNIYIADTMNMAI 166 (488)
Q Consensus 90 Vd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~---dG~LYVAD~~N~rI 166 (488)
+++++.++++-..++.|+.++.... ......+. -.....+++++ +++.+++-...+.|
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~----------------~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNM---ALRWETNI----------------KNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTT---EEEEEEEC----------------SSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccC---ceeeecCC----------------CCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 4578888887777789999998752 33222221 12356789998 78777666668888
Q ss_pred EEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEEEcCC
Q 011333 167 RKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 167 rkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaD~gN~rIrkI~~~g 230 (488)
+.++ .+. +..+.-... ...-....++++ .+++. ++++-...+.|+.++...
T Consensus 237 ~i~d~~~~~~~~~~~~~~~------------~~~~~~v~~~~~-~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSE------------KAHKSTVWQVRH-LPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEEETTTEEEEEEE------------ECCSSCEEEEEE-ETTEEEEEEEEETTSEEEEEEEEC
T ss_pred EEEeCcCCCcccceeeecc------------CCCcCCEEEEEE-CCCCCcEEEEEeCCCcEEEeecCC
Confidence 8888 222 222110000 000113466774 45565 677766778888888764
No 217
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=87.20 E-value=5.6 Score=38.49 Aligned_cols=123 Identities=9% Similarity=0.035 Sum_probs=72.7
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCccc--ccEEEecCCCCccccCCCcccccccCCcceEEEcCC-CcEEEEE
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYS--RPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIAD 160 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g--~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d-G~LYVAD 160 (488)
....+++.++|.++++-..++.|+.++......+ .+..+.+. -.....|++.++ ++++++=
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~~l~s~ 132 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNH----------------SSSVKTVKFNAKQDNVLASG 132 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCS----------------SSCCCEEEECSSSTTBEEEE
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCC----------------ccceEEEEEcCCCCCEEEEE
Confidence 3567888899987777666778999987641101 12222111 123567999987 7777776
Q ss_pred CCCCEEEEEc-CCCc------EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 161 TMNMAIRKIS-DSGV------TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 161 ~~N~rIrkid-~ggV------ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
...+.|+.++ ..+- ..+.-.. ....-....++++.+..+.++++-...+.|+.+++....+
T Consensus 133 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~------------~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 200 (416)
T 2pm9_A 133 GNNGEIFIWDMNKCTESPSNYTPLTPGQ------------SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE 200 (416)
T ss_dssp CSSSCEEBCBTTTTSSCTTTCCCBCCCC------------SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE
T ss_pred cCCCeEEEEECCCCcccccccccccccc------------ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc
Confidence 6778888888 2211 1100000 0011123567884333367777777788899988876544
Q ss_pred E
Q 011333 234 A 234 (488)
Q Consensus 234 ~ 234 (488)
.
T Consensus 201 ~ 201 (416)
T 2pm9_A 201 V 201 (416)
T ss_dssp E
T ss_pred c
Confidence 3
No 218
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=87.19 E-value=15 Score=39.18 Aligned_cols=117 Identities=11% Similarity=0.063 Sum_probs=71.7
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..++++++|.++++-...+.|+.++...+. .+..+.+. -..-..|++.++|+.+++=...+
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~--~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~s~D~ 494 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAAGV--STRRFVGH----------------TKDVLSVAFSLDNRQIVSASRDR 494 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECC----------------SSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCc--ceeEEeCC----------------CCCEEEEEEeCCCCEEEEEeCCC
Confidence 4678899999988887778899999987532 23333332 11246789999998777766778
Q ss_pred EEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC--eEEEEECCCCeEEEEEcCCCce
Q 011333 165 AIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC--SLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 165 rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G--~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
.|+.++ .+. ..++..... + .-..-.++++ .+++ .++++-...+.|+.+++....+
T Consensus 495 ~i~iwd~~~~~~~~~~~~~~----~---------h~~~v~~~~~-~~~~~~~~l~s~s~d~~v~vwd~~~~~~ 553 (694)
T 3dm0_A 495 TIKLWNTLGECKYTISEGGE----G---------HRDWVSCVRF-SPNTLQPTIVSASWDKTVKVWNLSNCKL 553 (694)
T ss_dssp CEEEECTTSCEEEEECSSTT----S---------CSSCEEEEEE-CSCSSSCEEEEEETTSCEEEEETTTCCE
T ss_pred EEEEEECCCCcceeeccCCC----C---------CCCcEEEEEE-eCCCCcceEEEEeCCCeEEEEECCCCcE
Confidence 899998 333 233322110 0 0112345663 3333 4555555667788777765443
No 219
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=86.92 E-value=18 Score=38.28 Aligned_cols=116 Identities=7% Similarity=0.016 Sum_probs=63.1
Q ss_pred ceEEEEccCCc-EEEEECCC----CeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC--CCcEE
Q 011333 85 PYSVEVLPGGE-LLILDSAN----SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIY 157 (488)
Q Consensus 85 P~GIaVd~dG~-LYVaD~~n----~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~--dG~LY 157 (488)
+..+++++||. |+++.... ..|+.++..++. ....+.... ..+ .......+++.+ +|.++
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~--~~~---------~~~~~~~~~~sp~~dg~~l 326 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVET--DKH---------YVEPLHPLTFLPGSNNQFI 326 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEE--CSS---------CCCCCSCCEECTTCSSEEE
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEcc--CCC---------eECccCCceeecCCCCEEE
Confidence 45788899998 66543221 388999987631 333333210 000 012235688888 88744
Q ss_pred E-EEC-CCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCe-eEEECCCC-eEEEEECCCC----eEEEEE
Q 011333 158 I-ADT-MNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFD-VVYIGSSC-SLLVIDRGNR----AIREIQ 227 (488)
Q Consensus 158 V-AD~-~N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~g-Ia~vd~~G-~LYVaD~gN~----rIrkI~ 227 (488)
+ ++. +..+|..++ +++ +..+.++.. ...+ ++ ++++| .||++....+ .|+.++
T Consensus 327 ~~~~~~g~~~l~~~~~~~~~~~~l~~~~~-----------------~v~~~~~-~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 327 WQSRRDGWNHLYLYDTTGRLIRQVTKGEW-----------------EVTNFAG-FDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp EEECTTSSCEEEEEETTSCEEEECCCSSS-----------------CEEEEEE-ECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred EEEccCCccEEEEEECCCCEEEecCCCCe-----------------EEEeeeE-EcCCCCEEEEEecCCCCceEEEEEEE
Confidence 4 433 245777777 555 444433211 0122 45 44444 5777766544 788888
Q ss_pred cCCC
Q 011333 228 LHFD 231 (488)
Q Consensus 228 ~~g~ 231 (488)
..+.
T Consensus 389 ~~~~ 392 (706)
T 2z3z_A 389 IKGG 392 (706)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 7653
No 220
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=86.67 E-value=11 Score=36.16 Aligned_cols=111 Identities=14% Similarity=0.183 Sum_probs=68.5
Q ss_pred eEEEE-----cc-CCcEEEEECCCCeEEEEeCCCCc----cccc-EEEecCCCCccccCCCcccccccCCcceEEEcCCC
Q 011333 86 YSVEV-----LP-GGELLILDSANSNLYRISSSLSL----YSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 154 (488)
Q Consensus 86 ~GIaV-----d~-dG~LYVaD~~n~rI~kid~~g~~----~g~i-~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG 154 (488)
..|++ .+ +|.++++-...+.|+.++..... .+.. ..+.| + -..-..|++.+++
T Consensus 25 ~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-------h---------~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 25 TSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-------H---------NHFVSDLALSQEN 88 (343)
T ss_dssp EEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-------C---------SSCEEEEEECSST
T ss_pred hheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhcc-------C---------CCceEEEEECCCC
Confidence 45555 44 78888877777788888765311 0111 11211 1 1224578999999
Q ss_pred cEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 155 NIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 155 ~LYVAD~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
.+.++-...+.|+.++ .+. +.++.+.. ....+|+ +.+++..+++-...+.|+.++..+
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~-----------------~~v~~v~-~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTGTTYKRFVGHQ-----------------SEVYSVA-FSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp TEEEEEETTSEEEEEETTSSCEEEEEECCC-----------------SCEEEEE-ECSSTTEEEEEETTSCEEEEESSS
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEcCCC-----------------CcEEEEE-ECCCCCEEEEEcCCCEEEEEeccC
Confidence 9888877788999998 333 44444321 1235677 466666666666678888888764
No 221
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=86.49 E-value=12 Score=38.22 Aligned_cols=120 Identities=7% Similarity=-0.002 Sum_probs=70.3
Q ss_pred CceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC-CcEEEEEC
Q 011333 84 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d-G~LYVAD~ 161 (488)
....+++.++|. ++++-..++.|+.++..... .+..+.+. .+ .-.....+++.++ |+++++-.
T Consensus 162 ~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~~~----~~---------~~~~v~~~~~~~~~~~~l~~~~ 226 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDRTH----HK---------QGSFVRDVEFSPDSGEFVITVG 226 (615)
T ss_dssp CEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEECSS----SC---------TTCCEEEEEECSTTCCEEEEEE
T ss_pred cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeeccc----CC---------CCceEEEEEECCCCCCEEEEEe
Confidence 456788889886 67776677899999976421 22222221 00 0013568999999 98777666
Q ss_pred CCCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 162 MNMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 162 ~N~rIrkid--~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
.++.|+.++ .+.. .++...... .-....++++ . ++.++++-..++.|+.++.....+
T Consensus 227 ~dg~i~vwd~~~~~~~~~~~~~~~~-------------~~~~v~~~~~-~-~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 227 SDRKISCFDGKSGEFLKYIEDDQEP-------------VQGGIFALSW-L-DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp TTCCEEEEETTTCCEEEECCBTTBC-------------CCSCEEEEEE-S-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCCeEEEEECCCCCEeEEecccccc-------------cCCceEEEEE-c-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 678899998 3443 333110000 0112356663 4 666666666667788887764433
No 222
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=86.42 E-value=5 Score=41.10 Aligned_cols=110 Identities=6% Similarity=0.096 Sum_probs=69.8
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC----------C
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD----------R 153 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~----------d 153 (488)
....++++++|.++++-..++.|+.++..... .+..+.+. + -...+.+++.+ +
T Consensus 490 ~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~------h---------~~~v~~~~~sp~~~~~~~~~~~ 552 (615)
T 1pgu_A 490 KPSYISISPSETYIAAGDVMGKILLYDLQSRE--VKTSRWAF------R---------TSKINAISWKPAEKGANEEEIE 552 (615)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEECCSCC------C---------SSCEEEEEECCCC------CCS
T ss_pred ceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc--ceeEeecC------C---------CCceeEEEEcCccccccccccC
Confidence 56789999999988877778899999987421 11111110 1 23467899998 8
Q ss_pred CcEEEEECCCCEEEEEc--CC-C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 154 GNIYIADTMNMAIRKIS--DS-G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 154 G~LYVAD~~N~rIrkid--~g-g-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
|.++++=...+.|+.++ .+ . +.++.+. -....+|++ .+++. +++-...+.|+.+++.
T Consensus 553 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h-----------------~~~v~~l~~-s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 553 EDLVATGSLDTNIFIYSVKRPMKIIKALNAH-----------------KDGVNNLLW-ETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp CCEEEEEETTSCEEEEESSCTTCCEEETTSS-----------------TTCEEEEEE-EETTE-EEEEETTSCEEEEEEC
T ss_pred CCEEEEEcCCCcEEEEECCCCceechhhhcC-----------------ccceEEEEE-cCCCC-eEEecCCceEEEEeee
Confidence 98777766678888888 33 2 2222111 113467884 45666 5555566778777754
No 223
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=86.15 E-value=18 Score=38.47 Aligned_cols=118 Identities=11% Similarity=0.084 Sum_probs=71.8
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC--cEEEEECC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG--NIYIADTM 162 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG--~LYVAD~~ 162 (488)
-..++++++|.++++-...+.|+.++..+. ....+... ..++ -..-..+++.+++ .++++=..
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~---~~~~~~~~---~~~h---------~~~v~~~~~~~~~~~~~l~s~s~ 539 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGE---CKYTISEG---GEGH---------RDWVSCVRFSPNTLQPTIVSASW 539 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSC---EEEEECSS---TTSC---------SSCEEEEEECSCSSSCEEEEEET
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCCC---cceeeccC---CCCC---------CCcEEEEEEeCCCCcceEEEEeC
Confidence 457778888887777666778888876531 12222111 1122 1224568888776 45666556
Q ss_pred CCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEE
Q 011333 163 NMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY 235 (488)
Q Consensus 163 N~rIrkid--~ggV-ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~~ 235 (488)
.+.|+.++ .+.. .++.+.. ....+|+ +.++|+++++-...+.|+.+++....+..
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h~-----------------~~v~~v~-~spdg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGHT-----------------GYVSTVA-VSPDGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcEEEEEcCCC-----------------CCEEEEE-EeCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 77888888 3333 3333211 1245677 57788888887778899999887655443
No 224
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=85.92 E-value=22 Score=37.84 Aligned_cols=82 Identities=13% Similarity=0.158 Sum_probs=44.3
Q ss_pred CceEEEEccCCc-EEEEECCCC-----eEEEEeCCCCcccccEEEecCCCCcc-cc---CCCcccc--ccc---CCcceE
Q 011333 84 EPYSVEVLPGGE-LLILDSANS-----NLYRISSSLSLYSRPKLVAGSAEGYS-GH---VDGKPRE--ARM---NHPKGL 148 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVaD~~n~-----rI~kid~~g~~~g~i~tvaG~~~G~~-G~---~dG~a~~--a~L---n~P~GI 148 (488)
.+..+++++||. |+++....+ .|+.++.++ +....+........ |. .++.... .++ .....+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS---GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT---CCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC---CceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 577889999998 555554234 899999876 33333332110000 00 0000000 000 124678
Q ss_pred EEcCCCc-EEEEECCCCEEEEEc
Q 011333 149 TVDDRGN-IYIADTMNMAIRKIS 170 (488)
Q Consensus 149 AvD~dG~-LYVAD~~N~rIrkid 170 (488)
++++||. |+++.. ..|+.++
T Consensus 115 ~~SpDg~~l~~~~~--~~i~~~d 135 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG--GELYLYD 135 (741)
T ss_dssp EECTTSSEEEEEET--TEEEEEE
T ss_pred EECCCCCEEEEEeC--CcEEEEE
Confidence 9999997 555553 7888888
No 225
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=85.34 E-value=13 Score=36.15 Aligned_cols=125 Identities=10% Similarity=0.018 Sum_probs=73.0
Q ss_pred CceEEEEccCCcEEEEECCCCe-EEEEeCCCCcccccEEEe-cCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 84 EPYSVEVLPGGELLILDSANSN-LYRISSSLSLYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~r-I~kid~~g~~~g~i~tva-G~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
.-..|+++++|.++++-...+. |+.++...+. .+..+. |. + -..-..|+++++|.++++=.
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~--~~~~~~~g~------h---------~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV--LVREFRRGL------D---------RADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCC--EEEEEECTT------C---------CSCEEEEEECTTSCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc--EEEEEEcCC------C---------CCcEEEEEECCCCCEEEEEE
Confidence 3478899999998888777787 9999987522 233333 21 1 12356899999999888777
Q ss_pred CCCEEEEEc-C-CC---cEEEeCCccCCCCCCCCC--CcccccCC----C-CCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 162 MNMAIRKIS-D-SG---VTTIAGGKWGRGGGHVDG--PSEDAKFS----N-DFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 162 ~N~rIrkid-~-gg---VttIaGg~~g~~~g~~dG--~~~~a~f~----~-P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
..+.|+.++ . +. ...+.+.-.. .+-.. ......+. . ...++ ..++|+.+++-..++.+++++..
T Consensus 260 ~d~~v~iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 260 DKWTLHVFEIFNDQDNKRHALKGWINM---KYFQSEWSLCNFKLSVDKHVRGCKIA-WISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp TTCEEEEEESSCCSCCCSEETTTTEEC---CCCCCSSCSEEEECCCCTTCCCCEEE-ESSSSEEEEEETTTTEEEEEEEE
T ss_pred CCCEEEEEEccCCCCcccccccceeec---cccccccceeEEEeccCCCCCceEEE-EeCCCCEEEEEeCCCeEEEEEEE
Confidence 788899888 2 21 1211110000 00000 00000011 1 13455 67788877777778888887654
No 226
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=85.32 E-value=6.3 Score=41.01 Aligned_cols=114 Identities=10% Similarity=-0.030 Sum_probs=63.4
Q ss_pred eEEEEccCCcEEE-E--ECCC-CeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEE
Q 011333 86 YSVEVLPGGELLI-L--DSAN-SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIAD 160 (488)
Q Consensus 86 ~GIaVd~dG~LYV-a--D~~n-~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD 160 (488)
..++++|||..++ + |.++ ..|++++.++ +....+.+.. .....+++.+||. |+.++
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~---g~~~~l~~~~----------------~~~~~~~~SpDG~~l~~~~ 213 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS---GGLRVFDSGE----------------GSFSSASISPGMKVTAGLE 213 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTT---CCCEEECCSS----------------CEEEEEEECTTSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC---CCceEeecCC----------------CccccceECCCCCEEEEcc
Confidence 5778888888544 2 2222 5688888765 3455553321 1136789999997 55455
Q ss_pred CCC-CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEc
Q 011333 161 TMN-MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQL 228 (488)
Q Consensus 161 ~~N-~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~ 228 (488)
..+ .+|++++ +++ .. +..+... ......-..+...+ .+++|.||++-...+.++.+..
T Consensus 214 ~~~~~~i~~~d~~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~-~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 214 TAREARLVTVDPRDGSVE-DLELPSK--------DFSSYRPTAITWLG-YLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSSCEEEEEECTTTCCEE-ECCCSCS--------HHHHHCCSEEEEEE-ECTTSCEEEEEEETTEEEEEET
T ss_pred CCCeeEEEEEcCCCCcEE-EccCCCc--------Chhhhhhcccccee-EcCCCcEEEEEEcCCcEEEEEE
Confidence 432 3899998 444 44 3322100 00000000112233 4567788887777778877777
No 227
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=85.13 E-value=30 Score=36.25 Aligned_cols=121 Identities=8% Similarity=0.072 Sum_probs=63.0
Q ss_pred eEEEEccCCc-EEEEECC-------CCeEEEEeCC-CCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcE
Q 011333 86 YSVEVLPGGE-LLILDSA-------NSNLYRISSS-LSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNI 156 (488)
Q Consensus 86 ~GIaVd~dG~-LYVaD~~-------n~rI~kid~~-g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~L 156 (488)
..++++|||. |+++... ...|+.++.+ .+..+....+.... -.....+++.+||.|
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~---------------~~~~~~~~~spdg~l 255 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP---------------EEAIAQAEWAPDGSL 255 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET---------------TBCEEEEEECTTSCE
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC---------------CceEcceEECCCCeE
Confidence 4567889997 5444322 2578888877 32111344443310 113567889999987
Q ss_pred EEEECCCC--EEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCC-CCCeeEEECCCCeEEEEEC-CCCeEEEEEcCC
Q 011333 157 YIADTMNM--AIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFS-NDFDVVYIGSSCSLLVIDR-GNRAIREIQLHF 230 (488)
Q Consensus 157 YVAD~~N~--rIrkid--~ggVttIaGg~~g~~~g~~dG~~~~a~f~-~P~gIa~vd~~G~LYVaD~-gN~rIrkI~~~g 230 (488)
|++-..+. +|.+++ .+....+....... ....+. ....++ +.+++.++++-. +..+|+.+++.+
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~---------~~p~w~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEF---------AGPLWTPGMRWFA-PLANGLIAVVHGKGAAVLGILDPES 325 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBS---------SCCCCSTTCCSEE-ECTTSCEEEEEBSSSCEEEEEETTT
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccc---------cCccccccCceEe-EeCCCEEEEEEEcCccEEEEEECCC
Confidence 77654444 888888 33344443321110 000111 124566 344555554433 445667777664
Q ss_pred C
Q 011333 231 D 231 (488)
Q Consensus 231 ~ 231 (488)
.
T Consensus 326 ~ 326 (662)
T 3azo_A 326 G 326 (662)
T ss_dssp T
T ss_pred C
Confidence 3
No 228
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=85.11 E-value=0.48 Score=45.84 Aligned_cols=69 Identities=9% Similarity=0.010 Sum_probs=42.6
Q ss_pred eEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCE
Q 011333 86 YSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMA 165 (488)
Q Consensus 86 ~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~r 165 (488)
..++++++|.++++-..++.|+.++..+. ....+ .. ..++ -..-..|++.++|+++++=...+.
T Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~iw~~~~~---~~~~~-~~---~~~h---------~~~v~~~~~s~~~~~l~s~s~d~~ 78 (377)
T 3dwl_C 15 YEHAFNSQRTEFVTTTATNQVELYEQDGN---GWKHA-RT---FSDH---------DKIVTCVDWAPKSNRIVTCSQDRN 78 (377)
T ss_dssp SCCEECSSSSEEECCCSSSCBCEEEEETT---EEEEC-CC---BCCC---------SSCEEEEEECTTTCCEEEEETTSS
T ss_pred EEEEECCCCCEEEEecCCCEEEEEEccCC---ceEEE-EE---EecC---------CceEEEEEEeCCCCEEEEEeCCCe
Confidence 46788899998777666778888877642 11111 11 1111 123467899999986666555677
Q ss_pred EEEEc
Q 011333 166 IRKIS 170 (488)
Q Consensus 166 Irkid 170 (488)
|+.++
T Consensus 79 v~vwd 83 (377)
T 3dwl_C 79 AYVYE 83 (377)
T ss_dssp EEEC-
T ss_pred EEEEE
Confidence 88777
No 229
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=84.94 E-value=25 Score=32.75 Aligned_cols=68 Identities=9% Similarity=-0.019 Sum_probs=48.6
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEE--cCCCcEEEEEC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV--DDRGNIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAv--D~dG~LYVAD~ 161 (488)
....+++.++|.++++-..++.|+.++... +....+.+. -.....|++ +++|+++++-.
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~---~~~~~~~~~----------------~~~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSS---NQAIQIAQH----------------DAPVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEEC----------------SSCEEEEEEEECSSCEEEEEEE
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCC---CCceeeccc----------------cCceEEEEEEeCCCCCEEEEcc
Confidence 457889999998777766778999999875 333333332 122467888 88888777666
Q ss_pred CCCEEEEEc
Q 011333 162 MNMAIRKIS 170 (488)
Q Consensus 162 ~N~rIrkid 170 (488)
..+.|+.++
T Consensus 149 ~dg~i~vwd 157 (368)
T 3mmy_A 149 WDKTLKFWD 157 (368)
T ss_dssp TTSEEEEEC
T ss_pred CCCcEEEEE
Confidence 678899998
No 230
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=84.66 E-value=26 Score=32.81 Aligned_cols=118 Identities=12% Similarity=0.082 Sum_probs=69.0
Q ss_pred CceEEEEccC--CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC---------
Q 011333 84 EPYSVEVLPG--GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--------- 152 (488)
Q Consensus 84 ~P~GIaVd~d--G~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~--------- 152 (488)
....+++.++ |.++++-..++.|+.++...........+.+. -.....+++.+
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC----------------TTCEEEEEECCCC-------
T ss_pred ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC----------------CCceEEEEEcCccccccccc
Confidence 4577888887 88777766778899988764321111222121 11245677777
Q ss_pred ----CCcEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC---CeEEEEECCCCe
Q 011333 153 ----RGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS---CSLLVIDRGNRA 222 (488)
Q Consensus 153 ----dG~LYVAD~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~---G~LYVaD~gN~r 222 (488)
++.++++-...+.|+.++ .+. ...+.....+ .-....+++ +.++ +.++++-...+.
T Consensus 167 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------------h~~~v~~~~-~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 167 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-------------HSDWVRDVA-WSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp ---CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-------------CSSCEEEEE-ECCCCSSSEEEEEEETTSC
T ss_pred cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec-------------ccCcEeEEE-ECCCCCCCCeEEEEeCCCE
Confidence 577777766677888887 332 1111110000 011345777 4555 777777777788
Q ss_pred EEEEEcCCC
Q 011333 223 IREIQLHFD 231 (488)
Q Consensus 223 IrkI~~~g~ 231 (488)
|+.++....
T Consensus 233 i~iwd~~~~ 241 (379)
T 3jrp_A 233 CIIWTQDNE 241 (379)
T ss_dssp EEEEEESST
T ss_pred EEEEeCCCC
Confidence 888887753
No 231
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=84.57 E-value=16 Score=35.38 Aligned_cols=70 Identities=13% Similarity=0.124 Sum_probs=48.9
Q ss_pred cceEEEcCCCcEEEEECCCCE-EEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC
Q 011333 145 PKGLTVDDRGNIYIADTMNMA-IRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN 220 (488)
Q Consensus 145 P~GIAvD~dG~LYVAD~~N~r-Irkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN 220 (488)
-+.|+++++|.++++=...+. |+.++ .+. +.++..+.. -....+|+ ..++|.++++-...
T Consensus 198 v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h---------------~~~v~~~~-~s~~~~~l~s~s~d 261 (355)
T 3vu4_A 198 IKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD---------------RADVVDMK-WSTDGSKLAVVSDK 261 (355)
T ss_dssp EEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC---------------CSCEEEEE-ECTTSCEEEEEETT
T ss_pred eEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC---------------CCcEEEEE-ECCCCCEEEEEECC
Confidence 468999999998887766776 99998 344 455541100 01346788 57788888877778
Q ss_pred CeEEEEEcCC
Q 011333 221 RAIREIQLHF 230 (488)
Q Consensus 221 ~rIrkI~~~g 230 (488)
+.|+.+++..
T Consensus 262 ~~v~iw~~~~ 271 (355)
T 3vu4_A 262 WTLHVFEIFN 271 (355)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEccC
Confidence 8999998764
No 232
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=84.35 E-value=7.1 Score=37.42 Aligned_cols=115 Identities=11% Similarity=-0.013 Sum_probs=66.9
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCccccc-EEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i-~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
...++++++|.++++-..++.|+.++..... .+ ..+.+ ++ -...+.|++.++|..+++=..+
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~--~~~~~~~~------~h---------~~~v~~l~fs~~g~~l~s~~~~ 235 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSPD--QASSRFPV------DE---------EAKIKEVKFADNGYWMVVECDQ 235 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCTT--SCCEECCC------CT---------TSCEEEEEECTTSSEEEEEESS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCC--CCccEEec------cC---------CCCEEEEEEeCCCCEEEEEeCC
Confidence 5688899999988887778899999887532 12 22322 01 1235689999999866554433
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC-CCeEEEEEcCC
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-NRAIREIQLHF 230 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g-N~rIrkI~~~g 230 (488)
.|+.+| .+. +.++..-. + ....+.. ..++ .+++|.++++-.+ .+.|+.++...
T Consensus 236 -~v~iwd~~~~~~~~~~~~~~--------~---~~~~~~~-~~~~-~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 236 -TVVCFDLRKDVGTLAYPTYT--------I---PEFKTGT-VTYD-IDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp -BEEEEETTSSTTCBSSCCCB--------C--------CC-EEEE-ECTTSSEEEEEETTTTEEEEEEECT
T ss_pred -eEEEEEcCCCCcceeecccc--------c---ccccccc-eEEE-ECCCCCEEEEecCCCCcEEEEEEcc
Confidence 889888 222 22221100 0 0001111 3577 5777776666444 67788777643
No 233
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=84.17 E-value=15 Score=35.19 Aligned_cols=111 Identities=11% Similarity=0.109 Sum_probs=65.9
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCC-CCc-ccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSS-LSL-YSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~-g~~-~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
-..++++++|.++++-...+.|+.++.. .+. ...+.++.+. -..-..|++.++|+++++=..
T Consensus 110 V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH----------------SQDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC----------------SSCEEEEEECSSSSEEEEEET
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC----------------CCceEEEEECCCCCEEEEEcC
Confidence 4678899999988877777889999873 211 0112222221 123467899999988887777
Q ss_pred CCEEEEEc--CCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC--CeEEEEECCCCeEEEEEcC
Q 011333 163 NMAIRKIS--DSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS--CSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 163 N~rIrkid--~gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~--G~LYVaD~gN~rIrkI~~~ 229 (488)
.+.|+.++ .+. +.++.+.. ..-++++ +.++ +.++++-...+.|+.+++.
T Consensus 174 D~~i~iW~~~~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 174 DDTVRIWKDYDDDWECVAVLNGHE-----------------GTVWSSD-FDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCS-----------------SCEEEEE-ECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred CCeEEEEECCCCCeeEEEEccCCC-----------------CcEEEEE-ecCCCCeeEEEEEeCCCeEEEEEec
Confidence 78888887 332 23332211 1234566 3444 4455555556677776654
No 234
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=83.94 E-value=13 Score=35.67 Aligned_cols=112 Identities=19% Similarity=0.130 Sum_probs=67.1
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcc----cc-cEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEE
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLY----SR-PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA 159 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~----g~-i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVA 159 (488)
-..|++.++|.++++-...+.|+.++...... .. +.++.| + -..-..|++.++|+++++
T Consensus 61 v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-------h---------~~~V~~v~~sp~g~~las 124 (330)
T 2hes_X 61 IRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-------H---------ENEVKGVAWSNDGYYLAT 124 (330)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--------------------CEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-------C---------CCcEEEEEECCCCCEEEE
Confidence 46788999999888877778898888742110 01 111211 1 123467999999987777
Q ss_pred ECCCCEEEEEcC--CC-----cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 160 DTMNMAIRKISD--SG-----VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 160 D~~N~rIrkid~--gg-----VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
=...+.|+.++- .+ +.++.+. -....+|+ ..+++.++++-...+.|+.++...
T Consensus 125 ~s~D~~v~iwd~~~~~~~~~~~~~~~~h-----------------~~~v~~v~-~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 125 CSRDKSVWIWETDESGEEYECISVLQEH-----------------SQDVKHVI-WHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp EETTSCEEEEECCTTCCCCEEEEEECCC-----------------SSCEEEEE-ECSSSSEEEEEETTSCEEEEEEET
T ss_pred EeCCCEEEEEeccCCCCCeEEEEEeccC-----------------CCceEEEE-ECCCCCEEEEEcCCCeEEEEECCC
Confidence 666788888872 21 1222221 01235677 466777777777777888877653
No 235
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=83.40 E-value=15 Score=39.87 Aligned_cols=115 Identities=14% Similarity=0.129 Sum_probs=72.1
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
...|..|.+|+|||+...++-|.++++.. +++..+... +..+ -+.+..|+.|.+|+|||+-. .
T Consensus 474 i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~---~~~~~~~~~--~~~~----------~~~~~~i~~d~~g~lWigt~--~ 536 (758)
T 3ott_A 474 INQIIPDNEGNVWVLLYNNKGIDKINPRT---REVTKLFAD--ELTG----------EKSPNYLLCDEDGLLWVGFH--G 536 (758)
T ss_dssp EEEEEECTTSCEEEEETTCSSEEEEETTT---TEEEEECTT--TSCG----------GGCEEEEEECTTSCEEEEET--T
T ss_pred eeeEEEcCCCCEEEEccCCCCcEEEeCCC---CceEEecCC--CcCC----------CcccceEEECCCCCEEEEec--C
Confidence 56788899999999444446799999875 344444211 1000 13467899999999999963 5
Q ss_pred EEEEEcC--CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 011333 165 AIRKISD--SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 165 rIrkid~--ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~ 234 (488)
-|.+++. +.+..+. . +|.+ -+...+|+ .+ +|+|||+- ++-|.++++......
T Consensus 537 Gl~~~~~~~~~~~~~~--~--------~gl~----~~~i~~i~-~~-~g~lWi~t--~~Gl~~~~~~~~~~~ 590 (758)
T 3ott_A 537 GVMRINPKDESQQSIS--F--------GSFS----NNEILSMT-CV-KNSIWVST--TNGLWIIDRKTMDAR 590 (758)
T ss_dssp EEEEECC--CCCCBCC--C--------CC-------CCEEEEE-EE-TTEEEEEE--SSCEEEEETTTCCEE
T ss_pred ceEEEecCCCceEEec--c--------cCCC----ccceEEEE-EC-CCCEEEEC--CCCeEEEcCCCceeE
Confidence 6888883 3332221 0 1111 12345665 44 89999986 456899998765443
No 236
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=83.02 E-value=24 Score=32.84 Aligned_cols=123 Identities=7% Similarity=0.011 Sum_probs=71.2
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCC-CcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEEEEC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSL-SLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g-~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYVAD~ 161 (488)
....+++++++ |+++. ..+.|+.++... .. ......... .-.....|++.+ +|+++++-.
T Consensus 152 ~v~~~~~~~~~-l~~~~-~d~~i~i~d~~~~~~-~~~~~~~~~---------------~~~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 152 KIFTMDTNSSR-LIVGM-NNSQVQWFRLPLCED-DNGTIEESG---------------LKYQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp CEEEEEECSSE-EEEEE-STTEEEEEESSCCTT-CCCEEEECS---------------CSSCEEEEEECSGGGCEEEEEE
T ss_pred ceEEEEecCCc-EEEEe-CCCeEEEEECCcccc-ccceeeecC---------------CCCceeEEEECCCCCCEEEEEe
Confidence 56778888776 55554 457888888764 21 111112111 012357899999 898777766
Q ss_pred CCCEEEEEc--CC------C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 162 MNMAIRKIS--DS------G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 162 ~N~rIrkid--~g------g-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
..+.|+.++ .. . +.++.+..... .+ ........+++ +.+++.++++-..++.|+.+++....
T Consensus 214 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~i~~~~-~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL-----KD---TNLAYPVNSIE-FSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp TTSEEEEEECCTTCCSTTCTTCEEEECCCCCT-----TC---CSSCCCEEEEE-ECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred cCCcEEEEEEcCCCcccccccceeeecccccc-----cc---cccceeEEEEE-EcCCCCEEEEecCCceEEEEcCccHh
Confidence 788888855 33 3 34444321100 00 01112446777 56667766666677899999987544
Q ss_pred e
Q 011333 233 C 233 (488)
Q Consensus 233 ~ 233 (488)
+
T Consensus 285 ~ 285 (342)
T 1yfq_A 285 K 285 (342)
T ss_dssp E
T ss_pred H
Confidence 3
No 237
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=82.98 E-value=14 Score=42.07 Aligned_cols=112 Identities=8% Similarity=0.012 Sum_probs=70.2
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC--CCcEEEEEC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIYIADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~--dG~LYVAD~ 161 (488)
....++++++|.++++-..++.|+.++..++. .+..+.+. -..-..+++.+ ++.++++-.
T Consensus 659 ~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~~~l~sg~ 720 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSADKKVKIWDSATGK--LVHTYDEH----------------SEQVNCCHFTNKSNHLLLATGS 720 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECC----------------SSCEEEEEECSSSSCCEEEEEE
T ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEECCCCc--eEEEEcCC----------------CCcEEEEEEecCCCceEEEEEe
Confidence 45788999999988877778899999987532 23333332 11245677777 445666666
Q ss_pred CCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 162 MNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 162 ~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
..+.|+.++ .+. +.++.+.. ....+++ +.+++.++++-...+.|+.++....
T Consensus 721 ~d~~v~vwd~~~~~~~~~~~~h~-----------------~~v~~~~-~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 721 NDFFLKLWDLNQKECRNTMFGHT-----------------NSVNHCR-FSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp TTSCEEEEETTSSSEEEEECCCS-----------------SCEEEEE-ECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred CCCeEEEEECCCcchhheecCCC-----------------CCEEEEE-EecCCCEEEEEECCCeEEEEeCCCC
Confidence 677888888 333 33443211 1235666 4566666666666777888876643
No 238
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=82.78 E-value=13 Score=39.46 Aligned_cols=64 Identities=8% Similarity=0.107 Sum_probs=41.0
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEECC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTM 162 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~~ 162 (488)
.+..+++++|+.|+++. ++.|+.++..+ +....+.... .....+++++||+ |.++ .
T Consensus 83 ~v~~~~~spd~~~~~~~--~~~i~~~d~~~---~~~~~l~~~~----------------~~~~~~~~SpdG~~la~~--~ 139 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFT--QGGLVGFDMLA---RKVTYLFDTN----------------EETASLDFSPVGDRVAYV--R 139 (706)
T ss_dssp CCEEEEETTTTEEEEEE--TTEEEEEETTT---TEEEEEECCT----------------TCCTTCEECTTSSEEEEE--E
T ss_pred CceeEEECCCCeEEEEE--CCEEEEEECCC---CceEEccCCc----------------ccccCCcCCCCCCEEEEE--E
Confidence 57889999996666663 37999999876 3444443220 1245578888886 3333 3
Q ss_pred CCEEEEEc
Q 011333 163 NMAIRKIS 170 (488)
Q Consensus 163 N~rIrkid 170 (488)
++.|+.++
T Consensus 140 ~~~i~v~~ 147 (706)
T 2z3z_A 140 NHNLYIAR 147 (706)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEe
Confidence 46777777
No 239
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=82.22 E-value=17 Score=33.97 Aligned_cols=121 Identities=11% Similarity=0.072 Sum_probs=67.2
Q ss_pred CceEEEEccC---Cc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC----Cc
Q 011333 84 EPYSVEVLPG---GE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR----GN 155 (488)
Q Consensus 84 ~P~GIaVd~d---G~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d----G~ 155 (488)
.-..|++.|+ +. ++++-...+.|+.++.... ..+..+.+.... ..-.....+++.++ |.
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~--~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~~~~ 86 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQ--GEIRLLQSYVDA-----------DADENFYTCAWTYDSNTSHP 86 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGG--GCEEEEEEEECS-----------CTTCCEEEEEEEECTTTCCE
T ss_pred ceEEEEEecccCCCCceEEEECCCCEEEEEEcCCC--cEEEeeeecccc-----------CCCCcEEEEEeccCCCCCCC
Confidence 3467788763 33 4444444558888887632 223333221000 00123567888877 55
Q ss_pred EEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 156 IYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 156 LYVAD~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
++++=..++.|+.++ .+. +.++.+.. ....+|++.+.+++++++-...+.|+.+++....
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-----------------~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGHG-----------------NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESCC-----------------SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCCC-----------------CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe
Confidence 666655678999998 333 44443321 1345677433266666666667788888877544
Q ss_pred eE
Q 011333 233 CA 234 (488)
Q Consensus 233 ~~ 234 (488)
+.
T Consensus 150 ~~ 151 (366)
T 3k26_A 150 LV 151 (366)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 240
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=82.10 E-value=11 Score=35.89 Aligned_cols=112 Identities=13% Similarity=-0.006 Sum_probs=65.1
Q ss_pred eEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC--CCcEEEEECCC
Q 011333 86 YSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIYIADTMN 163 (488)
Q Consensus 86 ~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~--dG~LYVAD~~N 163 (488)
..++++++|.++++-...+.|+.++...+....+.++.|. . ..-..|++.+ +|+++++=...
T Consensus 17 ~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH----~------------~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 17 HDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGH----E------------GPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp EEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECC----S------------SCEEEEEECCGGGSSCEEEEETT
T ss_pred EEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCC----C------------ccEEEEEeCCCCCCCEEEEEECC
Confidence 5678889999888877778898888754210012223222 1 1234677754 46766665566
Q ss_pred CEEEEEc-C-CC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEEEECCCCeEEEEEcCC
Q 011333 164 MAIRKIS-D-SG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 164 ~rIrkid-~-gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~-~G~LYVaD~gN~rIrkI~~~g 230 (488)
+.|+..+ . +. +.++.+.. ....+|++.+. ++.++++-...+.|+.++...
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h~-----------------~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGHD-----------------SSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCCS-----------------SCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred CEEEEEECCCCcceEEEEccCCC-----------------CceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 7788887 2 22 22222211 12456774332 266777777777888877654
No 241
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=82.03 E-value=32 Score=31.81 Aligned_cols=70 Identities=9% Similarity=0.187 Sum_probs=45.3
Q ss_pred ceEEEEccC-CcEEEEECCCCeEEEEeCCCCcc--cc-cEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEE
Q 011333 85 PYSVEVLPG-GELLILDSANSNLYRISSSLSLY--SR-PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 160 (488)
Q Consensus 85 P~GIaVd~d-G~LYVaD~~n~rI~kid~~g~~~--g~-i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD 160 (488)
-..|+++|+ ++++++-...+.|+.++...... +. ..++.| + -.....+++.++|+++++=
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-------h---------~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-------H---------SHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-------C---------SSCEEEEEECTTSSEEEEE
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-------C---------CCCEEEEEECCCCCEEEEE
Confidence 467888886 67888766677888887653210 11 111111 1 1235679999999877776
Q ss_pred CCCCEEEEEc
Q 011333 161 TMNMAIRKIS 170 (488)
Q Consensus 161 ~~N~rIrkid 170 (488)
.....|+.++
T Consensus 105 ~~d~~i~~~~ 114 (340)
T 4aow_A 105 SWDGTLRLWD 114 (340)
T ss_dssp ETTSEEEEEE
T ss_pred cccccceEEe
Confidence 6678888888
No 242
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=81.86 E-value=42 Score=33.06 Aligned_cols=108 Identities=15% Similarity=0.113 Sum_probs=63.6
Q ss_pred EEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCEEEE
Q 011333 89 EVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRK 168 (488)
Q Consensus 89 aVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rIrk 168 (488)
++.+++.++++-..++.|+.++..... .+..+.+. -.....++++++|+.+++-...+.|+.
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~l~sg~~dg~i~v 336 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMK--CLYILSGH----------------TDRIYSTIYDHERKRCISASMDTTIRI 336 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEecCC----------------CCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 345667777766667889999876421 22233221 123567899999987777777888999
Q ss_pred Ec--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 011333 169 IS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 169 id--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~ 234 (488)
++ .+. +.++.+.. .....++ .+ +..+++-...+.|+.+++......
T Consensus 337 wd~~~~~~~~~~~~h~-----------------~~v~~~~-~~--~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 337 WDLENGELMYTLQGHT-----------------ALVGLLR-LS--DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp EETTTTEEEEEECCCS-----------------SCEEEEE-EC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred EECCCCcEEEEEeCCC-----------------CcEEEEE-Ec--CCEEEEEeCCCcEEEEECCCCcee
Confidence 98 333 34443211 1223455 22 344555555677777777654433
No 243
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=81.25 E-value=38 Score=32.22 Aligned_cols=68 Identities=9% Similarity=-0.000 Sum_probs=48.0
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..+++.++|.++++-...+.|+.++...+. .+..+.+. -..-..|++.++|+.+++=...+
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~--~~~~~~~h----------------~~~v~~v~~sp~~~~l~s~~~d~ 140 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGT--TYKRFVGH----------------QSEVYSVAFSPDNRQILSAGAER 140 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSC--EEEEEECC----------------CSCEEEEEECSSTTEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCc--EEEEEcCC----------------CCcEEEEEECCCCCEEEEEcCCC
Confidence 4678889999988887778899999987521 23334332 11246789999998776655677
Q ss_pred EEEEEc
Q 011333 165 AIRKIS 170 (488)
Q Consensus 165 rIrkid 170 (488)
.|+.++
T Consensus 141 ~i~~wd 146 (343)
T 2xzm_R 141 EIKLWN 146 (343)
T ss_dssp CEEEEE
T ss_pred EEEEEe
Confidence 888887
No 244
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=80.91 E-value=6.2 Score=38.77 Aligned_cols=69 Identities=17% Similarity=0.124 Sum_probs=50.0
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..|+++|||.++++-...+.|+.++..... .+.++.. || -..-++|++.|||.++++=...+
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~--~~~~~~~------gH---------~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLS--MSKIFKQ------AH---------SFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTE--EEEEETT------SS---------SSCEEEEEECTTSCEEEEEETTS
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCc--EEEEecC------cc---------cCCEEEEEECCCCCEEEEEeCCC
Confidence 3578899999988877777899999987521 1223221 12 12357899999999999877788
Q ss_pred EEEEEc
Q 011333 165 AIRKIS 170 (488)
Q Consensus 165 rIrkid 170 (488)
.||.++
T Consensus 335 tvrvw~ 340 (365)
T 4h5i_A 335 TIHIIK 340 (365)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 899887
No 245
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=80.86 E-value=26 Score=36.65 Aligned_cols=83 Identities=16% Similarity=0.228 Sum_probs=47.2
Q ss_pred CceEEEEccCCcEEEEECCCC--eEEEEeCCCCcccccEEEecCCCCccccCCCcccccccC-CcceEEEcCCCcEEEEE
Q 011333 84 EPYSVEVLPGGELLILDSANS--NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMN-HPKGLTVDDRGNIYIAD 160 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~--rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln-~P~GIAvD~dG~LYVAD 160 (488)
....+++++||.||++...++ +|++++.++ +....+....... + . ..+. ....+++.++|.++++-
T Consensus 243 ~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~---~~~~~l~~~~~~~-~---~----p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 243 AIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT---GAATQLCRREEEF-A---G----PLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp CEEEEEECTTSCEEEEECTTSSCEEEEECTTT---CCEEESSCCSSBS-S---C----CCCSTTCCSEEECTTSCEEEEE
T ss_pred eEcceEECCCCeEEEEECCCCCeEEEEEECCC---Cceeecccccccc-c---C----ccccccCceEeEeCCCEEEEEE
Confidence 456788889999777755444 899998865 3344433211000 0 0 0010 13468888888877654
Q ss_pred C-CCCEEEEEc-CCC-cEEE
Q 011333 161 T-MNMAIRKIS-DSG-VTTI 177 (488)
Q Consensus 161 ~-~N~rIrkid-~gg-VttI 177 (488)
. +..+|..++ +++ +..+
T Consensus 312 ~~~~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 312 GKGAAVLGILDPESGELVDA 331 (662)
T ss_dssp BSSSCEEEEEETTTTEEEEC
T ss_pred EcCccEEEEEECCCCcEEEe
Confidence 3 445677777 433 5444
No 246
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=80.53 E-value=5.9 Score=44.65 Aligned_cols=75 Identities=5% Similarity=-0.128 Sum_probs=46.1
Q ss_pred EEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCC--CccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 87 SVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAE--GYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 87 GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~--G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
.+++.++|.++++-...+.|+.++..++.......+.-... -..|+ -.....|+++++|.++++=...+
T Consensus 440 sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h---------~~~V~svafspdg~~LAsgs~Dg 510 (902)
T 2oaj_A 440 QKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAK---------ELAVDKISFAAETLELAVSIETG 510 (902)
T ss_dssp CCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSS---------SCCEEEEEEETTTTEEEEEETTS
T ss_pred cccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCC---------CCceeEEEecCCCCeEEEEecCc
Confidence 35567889999998888999999987532111000000000 00011 12467899999998777666677
Q ss_pred EEEEEc
Q 011333 165 AIRKIS 170 (488)
Q Consensus 165 rIrkid 170 (488)
.|+.++
T Consensus 511 tV~lwd 516 (902)
T 2oaj_A 511 DVVLFK 516 (902)
T ss_dssp CEEEEE
T ss_pred EEEEEE
Confidence 788777
No 247
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=80.05 E-value=8 Score=42.24 Aligned_cols=70 Identities=9% Similarity=-0.075 Sum_probs=41.8
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC--CcEEEEECC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR--GNIYIADTM 162 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d--G~LYVAD~~ 162 (488)
-..++++++|.++++-..++.|+.++..+.....+.++.+. -..-..|++.++ |+++++=..
T Consensus 12 V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h----------------~~~V~~l~~s~~~~~~~l~s~s~ 75 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH----------------EGPVWRVDWAHPKFGTILASCSY 75 (753)
T ss_dssp EEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCC----------------SSCEEEEEECCTTSCSEEEEEET
T ss_pred eEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCC----------------cCceEEEEecCCCCCCEEEEEeC
Confidence 35667788888666666678888888653211112222221 112356777766 776666556
Q ss_pred CCEEEEEc
Q 011333 163 NMAIRKIS 170 (488)
Q Consensus 163 N~rIrkid 170 (488)
.+.|+.++
T Consensus 76 Dg~I~vwd 83 (753)
T 3jro_A 76 DGKVLIWK 83 (753)
T ss_dssp TSCEEEEE
T ss_pred CCeEEEEE
Confidence 77777777
No 248
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=80.02 E-value=5.1 Score=40.86 Aligned_cols=117 Identities=6% Similarity=-0.101 Sum_probs=69.2
Q ss_pred CceEEEEccCCcEEE----EECCCCeEEEEeCCCCc-----c-cccEEEecCCCCccccCCCcccccccCCcceEEEcCC
Q 011333 84 EPYSVEVLPGGELLI----LDSANSNLYRISSSLSL-----Y-SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR 153 (488)
Q Consensus 84 ~P~GIaVd~dG~LYV----aD~~n~rI~kid~~g~~-----~-g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d 153 (488)
....++++++|.+++ +-...+.|+.++..... . ..+..+. . ..|+ -....+|++.++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~---~~~h---------~~~V~~v~~~p~ 160 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK-L---LKDA---------GGMVIDMKWNPT 160 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE-C---CCSG---------GGSEEEEEECSS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee-c---cCCC---------CCceEEEEECCC
Confidence 467899999998666 44556788888764210 0 0000010 0 0111 123578999987
Q ss_pred -CcEEEEECCCCEEEEEc-CCCcEE--EeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 154 -GNIYIADTMNMAIRKIS-DSGVTT--IAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 154 -G~LYVAD~~N~rIrkid-~ggVtt--IaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
++++++=...+.|+.+| ..+... ..+. -....+++ ..++|..+++-..++.|+.++..
T Consensus 161 ~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~-----------------~~~v~~v~-wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 161 VPSMVAVCLADGSIAVLQVTETVKVCATLPS-----------------TVAVTSVC-WSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CTTEEEEEETTSCEEEEEESSSEEEEEEECG-----------------GGCEEEEE-ECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCEEEEEECCCeEEEEEcCCCcceeeccCC-----------------CCceeEEE-EcCCCCEEEEEcCCCcEEEEccC
Confidence 77777666678888888 333222 1111 11356788 45667666666677889998887
Q ss_pred CC
Q 011333 230 FD 231 (488)
Q Consensus 230 g~ 231 (488)
+.
T Consensus 223 ~~ 224 (434)
T 2oit_A 223 LQ 224 (434)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 249
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=79.96 E-value=48 Score=32.59 Aligned_cols=113 Identities=11% Similarity=-0.032 Sum_probs=61.7
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....++++++|.++++-..++.|+.++...+. .+..+.+. -.....++++ +..+++=...
T Consensus 312 ~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h----------------~~~v~~~~~~--~~~l~s~s~d 371 (464)
T 3v7d_B 312 RIYSTIYDHERKRCISASMDTTIRIWDLENGE--LMYTLQGH----------------TALVGLLRLS--DKFLVSAAAD 371 (464)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEEC--SSEEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--EEEEEeCC----------------CCcEEEEEEc--CCEEEEEeCC
Confidence 34577788888877776667788888876421 22222221 1123456665 4555555557
Q ss_pred CEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 011333 164 MAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 164 ~rIrkid-~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~ 234 (488)
+.|+.++ ......+..... .....++ +..++.++++-. .+.|+.++.....+.
T Consensus 372 g~v~vwd~~~~~~~~~~~~~----------------~~~~~~~-~~~~~~~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 372 GSIRGWDANDYSRKFSYHHT----------------NLSAITT-FYVSDNILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp SEEEEEETTTCCEEEEEECT----------------TCCCEEE-EEECSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred CcEEEEECCCCceeeeecCC----------------CCccEEE-EEeCCCEEEEec-CCeEEEEECCCCcEE
Confidence 7888888 332222211100 0123344 445566655554 678888887755444
No 250
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=79.87 E-value=6 Score=37.12 Aligned_cols=129 Identities=9% Similarity=-0.034 Sum_probs=62.3
Q ss_pred CceEEEEcc---CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEE
Q 011333 84 EPYSVEVLP---GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 159 (488)
Q Consensus 84 ~P~GIaVd~---dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVA 159 (488)
....+++++ ++.++++-..++.|+.++..... .+..+.-. ...++ -.....+++.++|. ++++
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~--~~~~~---------~~~v~~~~~~~~~~~~l~~ 277 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH--PTKGFASV--SEKAH---------KSTVWQVRHLPQNRELFLT 277 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE--TTTEEEEE--EEECC---------SSCEEEEEEETTEEEEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC--cccceeee--ccCCC---------cCCEEEEEECCCCCcEEEE
Confidence 345667776 66665555556677777654211 00011000 00011 22356789999987 6666
Q ss_pred ECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCC-----cccccCCCCCeeEEECCCCeEEE-EECCCCeEEEEEcC
Q 011333 160 DTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGP-----SEDAKFSNDFDVVYIGSSCSLLV-IDRGNRAIREIQLH 229 (488)
Q Consensus 160 D~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~-----~~~a~f~~P~gIa~vd~~G~LYV-aD~gN~rIrkI~~~ 229 (488)
=...+.|+.++ .+. .......... .+ ..|. .....-....+++ ..+++.+++ +-...+.|+.++..
T Consensus 278 ~~~dg~i~iwd~~~~~~~~~~~~~g~~--~~-~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 278 AGGAGGLHLWKYEYPIQRSKKDSEGIE--MG-VAGSVSLLQNVTLSTQPISSLD-WSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp EETTSEEEEEEEECCSCC--CCTTSCC--CC-CCCEEEEEEEEECCSSCEEEEE-ECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EeCCCcEEEeecCCCcccccccCCCCc--cc-cccccceeeccccCCCCeeEEE-EcCCCCeEEEEecCCCcEEEEECC
Confidence 66677888887 222 1111000000 00 0000 0000112346777 455665544 66667888888765
No 251
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=79.85 E-value=21 Score=40.06 Aligned_cols=111 Identities=11% Similarity=0.061 Sum_probs=67.3
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
....|+++++|.++++-..++.|+.++..+. ......+. -..-..|++.+ |.+.++=...
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~---~~~~~~~~----------------~~~V~~l~fsp-g~~L~S~s~D 78 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQV---EVVIKLED----------------RSAIKEMRFVK-GIYLVVINAK 78 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTC---EEEEECSS----------------CCCEEEEEEET-TTEEEEEETT
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCc---EEEEEcCC----------------CCCEEEEEEcC-CCEEEEEECc
Confidence 4578899999998888777889999987642 22221111 01235788888 7744443457
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 011333 164 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 233 (488)
Q Consensus 164 ~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~ 233 (488)
+.|+..+ .+. +.++... .....++ ++++++.+++-..++.|+.+++....+
T Consensus 79 ~~v~lWd~~~~~~~~~~~~~------------------~~V~~v~-~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 79 DTVYVLSLYSQKVLTTVFVP------------------GKITSID-TDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp CEEEEEETTTCSEEEEEECS------------------SCEEEEE-CCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred CeEEEEECCCCcEEEEEcCC------------------CCEEEEE-ECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 8888888 333 3333211 0235566 455565555555667777777765443
No 252
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=79.83 E-value=23 Score=33.65 Aligned_cols=110 Identities=8% Similarity=0.077 Sum_probs=63.1
Q ss_pred CceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC---CCcEEEE
Q 011333 84 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD---RGNIYIA 159 (488)
Q Consensus 84 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~---dG~LYVA 159 (488)
....+++.+ ++.++++-...+.|+.++.... ........ -.....+++.+ ++.++++
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~ 161 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL---QTADVFNF----------------EETVYSHHMSPVSTKHCLVAV 161 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTT---EEEEEEEC----------------SSCEEEEEECSSCSSCCEEEE
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC---ccceeccC----------------CCceeeeEeecCCCCCcEEEE
Confidence 456788888 6667776666789999998752 22222211 01133455555 3446665
Q ss_pred ECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEEEcCC
Q 011333 160 DTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 160 D~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaD~gN~rIrkI~~~g 230 (488)
-..++.|+.++ .+. +.++.+.. ....++++ .+++. ++++-..++.|+.++...
T Consensus 162 ~~~~~~v~~~d~~~~~~~~~~~~~~-----------------~~v~~~~~-~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 162 GTRGPKVQLCDLKSGSCSHILQGHR-----------------QEILAVSW-SPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp EESSSSEEEEESSSSCCCEEECCCC-----------------SCEEEEEE-CSSCTTEEEEEETTSCEEEEETTC
T ss_pred EcCCCeEEEEeCCCcceeeeecCCC-----------------CcEEEEEE-CCCCCcEEEEEcCCCcEEEEECCC
Confidence 55677788877 233 34433211 12356774 44444 666666677888888754
No 253
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=79.73 E-value=14 Score=35.35 Aligned_cols=69 Identities=12% Similarity=0.104 Sum_probs=37.7
Q ss_pred ceEEEEcc-CCc-E-EEEECC----CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-E
Q 011333 85 PYSVEVLP-GGE-L-LILDSA----NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-I 156 (488)
Q Consensus 85 P~GIaVd~-dG~-L-YVaD~~----n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-L 156 (488)
...++++| ||. | |+++.. ..+|+.++.++ +.+..+.... .+ .....+++.+||. |
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~---~~~~~l~~~~-------~~-------~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 190 LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG---TNMRKVKTHA-------EG-------ESCTHEFWVPDGSAL 252 (388)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS---CCCEESCCCC-------TT-------EEEEEEEECTTSSCE
T ss_pred ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC---CceEEeeeCC-------CC-------cccccceECCCCCEE
Confidence 35677888 776 3 333322 45788888765 2333332210 00 0122467889996 5
Q ss_pred -EEEECCCC---EEEEEc
Q 011333 157 -YIADTMNM---AIRKIS 170 (488)
Q Consensus 157 -YVAD~~N~---rIrkid 170 (488)
|+++.... .|+.++
T Consensus 253 ~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp EEEEEETTCCCEEEEEEC
T ss_pred EEEecCCCCCcceEEEEe
Confidence 55654322 488998
No 254
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=79.48 E-value=14 Score=36.20 Aligned_cols=64 Identities=16% Similarity=0.114 Sum_probs=43.6
Q ss_pred ccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCEEEEEc
Q 011333 91 LPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 170 (488)
Q Consensus 91 d~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rIrkid 170 (488)
.+++.++++-..++.|+.++..... .+..+.+.. .-.....|+++++|+++++=...+.|+.++
T Consensus 179 ~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~--------------h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 242 (437)
T 3gre_A 179 NEEKSLLVALTNLSRVIIFDIRTLE--RLQIIENSP--------------RHGAVSSICIDEECCVLILGTTRGIIDIWD 242 (437)
T ss_dssp CSSCEEEEEEETTSEEEEEETTTCC--EEEEEECCG--------------GGCCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCe--eeEEEccCC--------------CCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 3578877777778899999987522 233333210 012467899999998777766678899888
No 255
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=78.21 E-value=45 Score=35.36 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=42.5
Q ss_pred ceEEEEccCCc-EEEEE--C--CCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEE
Q 011333 85 PYSVEVLPGGE-LLILD--S--ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA 159 (488)
Q Consensus 85 P~GIaVd~dG~-LYVaD--~--~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVA 159 (488)
...+++ +||. |+++. . ....|+.++..++ ....+.... ..+. +.....+++.++|.++++
T Consensus 289 ~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~--~~~~---------~~~~~~~~~spdg~~~~~ 353 (741)
T 2ecf_A 289 LARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN---QQRVLAHET--SPTW---------VPLHNSLRFLDDGSILWS 353 (741)
T ss_dssp EEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC---CEEEEEEEE--CSSC---------CCCCSCCEECTTSCEEEE
T ss_pred EEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC---ceEEEEEcC--CCCc---------CCcCCceEECCCCeEEEE
Confidence 356788 8888 44432 2 2457888988763 333333210 0000 112346789999986665
Q ss_pred ECCC--CEEEEEc-CCCcE
Q 011333 160 DTMN--MAIRKIS-DSGVT 175 (488)
Q Consensus 160 D~~N--~rIrkid-~ggVt 175 (488)
-... .+|..++ ++++.
T Consensus 354 ~~~~g~~~l~~~~~~~~~~ 372 (741)
T 2ecf_A 354 SERTGFQHLYRIDSKGKAA 372 (741)
T ss_dssp ECTTSSCEEEEECSSSCEE
T ss_pred ecCCCccEEEEEcCCCCee
Confidence 4333 4788887 55533
No 256
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.80 E-value=46 Score=31.53 Aligned_cols=120 Identities=11% Similarity=0.112 Sum_probs=60.5
Q ss_pred ceEEEEccCCc-EEEE-E-CCCCe--EEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC-CCcEEE
Q 011333 85 PYSVEVLPGGE-LLIL-D-SANSN--LYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYI 158 (488)
Q Consensus 85 P~GIaVd~dG~-LYVa-D-~~n~r--I~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~-dG~LYV 158 (488)
+..+++++||. |+++ . .+... |++++..+ +....+... .+ . . +++.+ +|.+++
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~---g~~~~l~~~--------~~------~---~-~~~s~~dg~~l~ 298 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET---LENEEVMVM--------PP------C---S-HLMSNFDGSLMV 298 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT---CCEEEEEEC--------CS------E---E-EEEECSSSSEEE
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCC---CCeEEeeeC--------CC------C---C-CCccCCCCceEE
Confidence 45568889987 5554 2 23444 99999875 333333221 00 1 1 67777 888777
Q ss_pred EEC----------------CCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEEC-
Q 011333 159 ADT----------------MNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDR- 218 (488)
Q Consensus 159 AD~----------------~N~rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaD~- 218 (488)
+.. .+..|+.++ . +.+..+....... +.-++ +. ......+++ .++| .|+++..
T Consensus 299 ~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~--~~~~~---~~-~~~~~~~~~-s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 299 GDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSW--DVLDG---DR-QITHPHPSF-TPNDDGVLFTSDF 371 (396)
T ss_dssp EEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCC--CCBTT---BS-STTCCCCEE-CTTSSEEEEEECT
T ss_pred EecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcc--ccccc---cc-cCCCCCceE-ccCCCeEEEEecC
Confidence 532 346888888 3 3344443321100 00000 00 112344554 4444 5665543
Q ss_pred -CCCeEEEEEcCCCc
Q 011333 219 -GNRAIREIQLHFDD 232 (488)
Q Consensus 219 -gN~rIrkI~~~g~~ 232 (488)
+...|+.+++.+..
T Consensus 372 ~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 372 EGVPAIYIADVPESY 386 (396)
T ss_dssp TSSCEEEEEECCTTC
T ss_pred CCCceEEEEEEcccc
Confidence 33467777766543
No 257
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=77.09 E-value=13 Score=38.52 Aligned_cols=71 Identities=8% Similarity=0.089 Sum_probs=39.0
Q ss_pred ceEEEcCCCcEEE--E-ECCC-CEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEEC
Q 011333 146 KGLTVDDRGNIYI--A-DTMN-MAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDR 218 (488)
Q Consensus 146 ~GIAvD~dG~LYV--A-D~~N-~rIrkid--~ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaD~ 218 (488)
..+++++||...+ + |..+ ..|+.++ .+.+..+.+... ...++++ .++|+ |+.++.
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~-----------------~~~~~~~-SpDG~~l~~~~~ 214 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG-----------------SFSSASI-SPGMKVTAGLET 214 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC-----------------EEEEEEE-CTTSCEEEEEEC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC-----------------ccccceE-CCCCCEEEEccC
Confidence 5788999997544 2 2222 5688888 344666543210 1245564 44454 444443
Q ss_pred CC-CeEEEEEcCCCceE
Q 011333 219 GN-RAIREIQLHFDDCA 234 (488)
Q Consensus 219 gN-~rIrkI~~~g~~~~ 234 (488)
.. ..|+.+++.+..+.
T Consensus 215 ~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 215 AREARLVTVDPRDGSVE 231 (582)
T ss_dssp SSCEEEEEECTTTCCEE
T ss_pred CCeeEEEEEcCCCCcEE
Confidence 22 36777777654443
No 258
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=75.73 E-value=18 Score=39.24 Aligned_cols=117 Identities=12% Similarity=0.073 Sum_probs=71.9
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
.-..++.+|+|.+.++-..++.|+.++.+ +.+..+. . +..-. =..-..+++.+||.+.++=...
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~----~~l~~l~-~--------~~~~~---~~sv~svafSPDG~~LAsgs~D 150 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDN----KMLTNLD-S--------KGNLS---SRTYHCFEWNPIESSIVVGNED 150 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETT----EEEEECC-C--------SSCST---TTCEEEEEECSSSSCEEEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCC----ceeeecc-C--------CCccc---cccEEEEEEcCCCCEEEEEcCC
Confidence 45788999999977777778889999865 2222222 1 00000 0123479999999866665668
Q ss_pred CEEEEEc-CCC---------cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 164 MAIRKIS-DSG---------VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 164 ~rIrkid-~gg---------VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
+.|+.++ .++ +.++-+...+ ....-.+|++ .++| +++-...+.|+.++..+..
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~g-------------h~~~V~sVaw-SPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDAG-------------SKDWVTHIVW-YEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCTT-------------CCCCEEEEEE-ETTE--EEEEETTCCEEEECCCSSS
T ss_pred CEEEEEECCCCccccccceeeeeeeccccc-------------ccccEEEEEE-cCCc--EEEEeCCCeEEEEECCCCc
Confidence 8899988 333 2444322111 1234567785 4556 5555667888888877655
No 259
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=75.63 E-value=29 Score=37.80 Aligned_cols=114 Identities=13% Similarity=0.117 Sum_probs=68.7
Q ss_pred CceEEEEccC--CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC---------
Q 011333 84 EPYSVEVLPG--GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--------- 152 (488)
Q Consensus 84 ~P~GIaVd~d--G~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~--------- 152 (488)
....+++.++ |.++++-..++.|+.++...........+.+. -.....|++++
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~----------------~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC----------------SSCEEEEEECCCC-------
T ss_pred CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC----------------CCceEEEEecCccccccccc
Confidence 4567888887 88777777778899988764311122222221 11234566666
Q ss_pred ----CCcEEEEECCCCEEEEEc--CCC-c----EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC---CeEEEEEC
Q 011333 153 ----RGNIYIADTMNMAIRKIS--DSG-V----TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS---CSLLVIDR 218 (488)
Q Consensus 153 ----dG~LYVAD~~N~rIrkid--~gg-V----ttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~---G~LYVaD~ 218 (488)
+|.++++-..++.|+.++ .+. . .++.+. -....+++ ..++ +.++++-.
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h-----------------~~~V~~l~-~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-----------------SDWVRDVA-WSPTVLLRSYLASVS 226 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC-----------------SSCEEEEE-ECCCCSSSEEEEEEE
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC-----------------CCcEEEEE-eccCCCCCCEEEEEe
Confidence 476666666678888887 332 1 111111 11346777 4555 78777777
Q ss_pred CCCeEEEEEcCCC
Q 011333 219 GNRAIREIQLHFD 231 (488)
Q Consensus 219 gN~rIrkI~~~g~ 231 (488)
..+.|+.++....
T Consensus 227 ~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 227 QDRTCIIWTQDNE 239 (753)
T ss_dssp SSSCEEEEEESSS
T ss_pred cCCEEEEecCCCC
Confidence 7888998887753
No 260
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=75.63 E-value=47 Score=30.12 Aligned_cols=110 Identities=12% Similarity=0.106 Sum_probs=61.1
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccc-cEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSR-PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~-i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
....++++++|.++++-..++.|+.++......+. +..+.+. -..-..|+++ ++++++=..
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~----------------~~~i~~~~~~--~~~l~~~~~ 122 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGH----------------QGNVCSLSFQ--DGVVISGSW 122 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCC----------------SSCEEEEEEE--TTEEEEEET
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhc----------------ccCEEEEEec--CCEEEEEeC
Confidence 45678899999977777777888888765321111 1122111 1123456663 555555555
Q ss_pred CCEEEEEcCCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEc
Q 011333 163 NMAIRKISDSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQL 228 (488)
Q Consensus 163 N~rIrkid~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~ 228 (488)
++.|+.++.+. +..+.+.. .....+++.+.+++++++-..++.|+.++.
T Consensus 123 d~~i~~~d~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~ 172 (313)
T 3odt_A 123 DKTAKVWKEGSLVYNLQAHN-----------------ASVWDAKVVSFSENKFLTASADKTIKLWQN 172 (313)
T ss_dssp TSEEEEEETTEEEEEEECCS-----------------SCEEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred CCCEEEEcCCcEEEecccCC-----------------CceeEEEEccCCCCEEEEEECCCCEEEEec
Confidence 78888888444 33333211 123455544535555555555677777763
No 261
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=75.57 E-value=33 Score=32.74 Aligned_cols=64 Identities=9% Similarity=0.146 Sum_probs=36.7
Q ss_pred EEEccCCc-EEE-EE-CCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEECCC
Q 011333 88 VEVLPGGE-LLI-LD-SANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTMN 163 (488)
Q Consensus 88 IaVd~dG~-LYV-aD-~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~~N 163 (488)
.+++|||. |++ ++ .++.+|+.++..+ +....+.... . ....++++.++|. |+++.. +
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~---g~~~~lt~~~---~------------~~~~~~~~spdg~~l~~~~~-~ 101 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNT---QVATQLTEGR---G------------DNTFGGFLSPDDDALFYVKD-G 101 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTT---CEEEECCCSS---C------------BCSSSCEECTTSSEEEEEET-T
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCC---CceEEeeeCC---C------------CCccceEEcCCCCEEEEEeC-C
Confidence 36778887 444 44 3445799999876 3333332210 0 0012457888885 555553 4
Q ss_pred CEEEEEc
Q 011333 164 MAIRKIS 170 (488)
Q Consensus 164 ~rIrkid 170 (488)
..|+.++
T Consensus 102 ~~l~~~d 108 (388)
T 3pe7_A 102 RNLMRVD 108 (388)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 6788887
No 262
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=75.51 E-value=19 Score=39.00 Aligned_cols=117 Identities=9% Similarity=0.126 Sum_probs=60.2
Q ss_pred EEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccC-CcceEEEcCCCcE-EE-EECC-
Q 011333 87 SVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMN-HPKGLTVDDRGNI-YI-ADTM- 162 (488)
Q Consensus 87 GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln-~P~GIAvD~dG~L-YV-AD~~- 162 (488)
.++..+||.+++++ .+.|+.++..++ ....+..... .. .+. ...++++.+||.. .+ ++..
T Consensus 21 ~~~w~~dg~~~~~~--~~~i~~~~~~~~---~~~~~~~~~~-~~----------~~~~~~~~~~~Spdg~~l~~~~~~~~ 84 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ--ENNILVFNAEYG---NSSVFLENST-FD----------EFGHSINDYSISPDGQFILLEYNYVK 84 (740)
T ss_dssp CEEECSSSEEEEEE--TTEEEEEETTTC---CEEEEECTTT-TT----------TCCSCCCEEEECTTSSEEEEEEEEEE
T ss_pred ccEECCCCcEEEEc--CCcEEEEECCCC---ceEEEEechh-hh----------hhcccccceEECCCCCEEEEEECCee
Confidence 56788899888777 679999998763 3333332210 00 011 1245788888863 32 2210
Q ss_pred ------CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCC--eeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 163 ------NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDF--DVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 163 ------N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~--gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
+..|..++ .++ +..+.+.. +......| +|. -||++ .+++||+.|...+.++++..++
T Consensus 85 ~~r~~~~~~~~~~d~~~~~~~~l~~~~---------~~~~~~~~-SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g 151 (740)
T 4a5s_A 85 QWRHSYTASYDIYDLNKRQLITEERIP---------NNTQWVTW-SPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTG 151 (740)
T ss_dssp CSSSCEEEEEEEEETTTTEECCSSCCC---------TTEEEEEE-CSSTTCEEEE-ETTEEEEESSTTSCCEECCSCC
T ss_pred eEEEccceEEEEEECCCCcEEEcccCC---------CcceeeEE-CCCCCEEEEE-ECCeEEEEECCCCceEEEcCCC
Confidence 13445566 322 32222110 00111112 232 35644 4577888887666677766554
No 263
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=74.37 E-value=59 Score=30.69 Aligned_cols=84 Identities=14% Similarity=0.077 Sum_probs=46.4
Q ss_pred ceEEEEccCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCC
Q 011333 85 PYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 85 P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N 163 (488)
...+++.+++. ++++-..++.|+.++..... ..+..+-... +......-......-.....|+++++|+.+++=..+
T Consensus 189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASADSRVKLWDVRRAS-GCLITLDQHN-GKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTCSS-CCSEECCTTT-TCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEECCCCCcEEEEEcCCCcEEEEECCCCC-cccccccccc-cccceeeccccccccCceeEEEEcCCCCEEEEecCC
Confidence 46788888877 66666667788888876321 1222221110 000000000001112345689999999877666667
Q ss_pred CEEEEEc
Q 011333 164 MAIRKIS 170 (488)
Q Consensus 164 ~rIrkid 170 (488)
+.|+.++
T Consensus 267 g~i~vwd 273 (408)
T 4a11_B 267 NRMRLWN 273 (408)
T ss_dssp SCEEEEE
T ss_pred CeEEEEE
Confidence 8888888
No 264
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=74.09 E-value=24 Score=32.22 Aligned_cols=71 Identities=11% Similarity=0.132 Sum_probs=39.0
Q ss_pred CceEEEEccC---CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC----cE
Q 011333 84 EPYSVEVLPG---GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG----NI 156 (488)
Q Consensus 84 ~P~GIaVd~d---G~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG----~L 156 (488)
....+++.++ +.++++-..++.|....... +....+.-- .++ -..-..|++.++| ++
T Consensus 169 ~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~----~~h---------~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 169 SDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKD---GKLHVAAKL----PGH---------KSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp CCEEEEECCCSSSCCEEEEEETTEEEEEEECTT---SCEEEEEEC----CCC---------CSCEEEEEECCCSSCSSEE
T ss_pred ceeEEEeccCCCCCcEEEEecCCCcEEEEccCC---Cceeeeeec----CCC---------CcceeEEEECCCCCCcceE
Confidence 3456777765 66666655555665555443 222111110 111 1224678888887 66
Q ss_pred EEEECCCCEEEEEc
Q 011333 157 YIADTMNMAIRKIS 170 (488)
Q Consensus 157 YVAD~~N~rIrkid 170 (488)
+++=...+.|+.++
T Consensus 233 l~s~~~dg~i~iwd 246 (351)
T 3f3f_A 233 IATGCKDGRIRIFK 246 (351)
T ss_dssp EEEEETTSCEEEEE
T ss_pred EEEEcCCCeEEEEe
Confidence 66655667777777
No 265
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=72.12 E-value=23 Score=39.99 Aligned_cols=68 Identities=10% Similarity=0.212 Sum_probs=43.5
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEe-cCCCCccccCCCcccccccCCcceEEEcCCCcEE-EEEC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIY-IADT 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tva-G~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LY-VAD~ 161 (488)
....+++++||..+++-...+.|+.++..+ +....+. +. -....++++++||..+ ++..
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~t---g~~~~~~~~~----------------~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLET---GKPTVIERSR----------------EAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTT---CCEEEEEECS----------------SSCCCCEEECTTSCEEEEEEE
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCC---CceEEeccCC----------------CCCccceEECCCCCeEEEEec
Confidence 567889999998555444557899999876 3444443 21 1123578999999733 3322
Q ss_pred ---------CCCEEEEEc
Q 011333 162 ---------MNMAIRKIS 170 (488)
Q Consensus 162 ---------~N~rIrkid 170 (488)
....|+.++
T Consensus 441 ~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEE
T ss_pred CccccccCCCCCeEEEEE
Confidence 125788888
No 266
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=71.79 E-value=76 Score=30.83 Aligned_cols=130 Identities=10% Similarity=0.135 Sum_probs=70.0
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCccccc-EEEecCC-CCccccCCCcccccccCCcceEE--EcCCCcEEEE
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRP-KLVAGSA-EGYSGHVDGKPREARMNHPKGLT--VDDRGNIYIA 159 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i-~tvaG~~-~G~~G~~dG~a~~a~Ln~P~GIA--vD~dG~LYVA 159 (488)
....|++.+++.++++-...+.|+.++......+.. ....+.. .......++ .-.....++ ..++++++++
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFG-----KNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGS-----SCCCEEEEEEEECSSCEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcc-----cccCceEEEEEEcCCCCEEEE
Confidence 457889999998777776778888887631000111 1111110 000000000 011123333 4467877777
Q ss_pred ECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 011333 160 DTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 234 (488)
Q Consensus 160 D~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~~~ 234 (488)
=...+.|+.++ .+. +.++.+... -....+++ +.+++.++++-...+.|+.+++....+.
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h---------------~~~v~~~~-~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPR---------------HGAVSSIC-IDEECCVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGG---------------GCCEEEEE-ECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCC---------------CCceEEEE-ECCCCCEEEEEcCCCeEEEEEcCCccEE
Confidence 66788899998 333 444443100 11346677 4666777776666788888887754443
No 267
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=71.34 E-value=66 Score=36.24 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=23.5
Q ss_pred CcceEEEcCCCcEEEEECCCCEEEEEc--CCCcEEEe
Q 011333 144 HPKGLTVDDRGNIYIADTMNMAIRKIS--DSGVTTIA 178 (488)
Q Consensus 144 ~P~GIAvD~dG~LYVAD~~N~rIrkid--~ggVttIa 178 (488)
....++++++|..+++-...+.|+.++ .+.+..+.
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec
Confidence 456899999997544433457899998 34455444
No 268
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.87 E-value=72 Score=30.16 Aligned_cols=33 Identities=9% Similarity=-0.098 Sum_probs=19.9
Q ss_pred cceEEEcCCCc-EEEE-E-CCCCE--EEEEc-C-CCcEEE
Q 011333 145 PKGLTVDDRGN-IYIA-D-TMNMA--IRKIS-D-SGVTTI 177 (488)
Q Consensus 145 P~GIAvD~dG~-LYVA-D-~~N~r--Irkid-~-ggVttI 177 (488)
+..++++++|. |+++ . ..... |+.++ . +....+
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l 279 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEV 279 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEE
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEe
Confidence 45678999996 5554 2 23334 88888 3 334444
No 269
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=69.47 E-value=13 Score=39.37 Aligned_cols=71 Identities=1% Similarity=-0.093 Sum_probs=43.0
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEEEC-
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT- 161 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVAD~- 161 (488)
.+..+++.+||.++++ ...+.|+.++..+ +....+.... .. . -.....+++.+||+ |.++..
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~---g~~~~~~~~~---~~--------~-~~~v~~~~~SpDg~~l~~~~~~ 81 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVET---NTSTVLIEGK---KI--------E-SLRAIRYEISPDREYALFSYNV 81 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGG---CCCEEEECTT---TT--------T-TTTCSEEEECTTSSEEEEEESC
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCC---CcEEEEeccc---cc--------c-ccccceEEECCCCCEEEEEecC
Confidence 4667788899985555 4566899998876 3334443321 00 0 01367899999998 443321
Q ss_pred C-------CCEEEEEc
Q 011333 162 M-------NMAIRKIS 170 (488)
Q Consensus 162 ~-------N~rIrkid 170 (488)
. ...|+.++
T Consensus 82 ~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 82 EPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCSSSCCCSEEEEEE
T ss_pred ccceeecceeeEEEEE
Confidence 1 25677777
No 270
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=68.72 E-value=74 Score=29.48 Aligned_cols=69 Identities=10% Similarity=0.085 Sum_probs=42.5
Q ss_pred eEEEEcc--CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC--CcEEEEEC
Q 011333 86 YSVEVLP--GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR--GNIYIADT 161 (488)
Q Consensus 86 ~GIaVd~--dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d--G~LYVAD~ 161 (488)
..|++.+ +|.++++-...+.|+.++...+....+.++.+. -..-+.|++.++ |.++++=.
T Consensus 57 ~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h----------------~~~v~~v~~~p~~~g~~l~s~s 120 (297)
T 2pm7_B 57 WRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH----------------SASVNSVQWAPHEYGPMLLVAS 120 (297)
T ss_dssp EEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC----------------SSCEEEEEECCGGGCSEEEEEE
T ss_pred EEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC----------------CCceeEEEeCcCCCCcEEEEEE
Confidence 4667654 478777777778899998764221122333221 112456888776 77666655
Q ss_pred CCCEEEEEc
Q 011333 162 MNMAIRKIS 170 (488)
Q Consensus 162 ~N~rIrkid 170 (488)
..+.|+.++
T Consensus 121 ~d~~v~~wd 129 (297)
T 2pm7_B 121 SDGKVSVVE 129 (297)
T ss_dssp TTSEEEEEE
T ss_pred CCCcEEEEE
Confidence 677888887
No 271
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=67.55 E-value=1.4e+02 Score=32.27 Aligned_cols=72 Identities=11% Similarity=0.015 Sum_probs=48.2
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCccc-----ccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEE
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYS-----RPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA 159 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g-----~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVA 159 (488)
-..++++|||.++++-...+.|..++..++... .+.++-+. ..|+ .+.-..|++.++| +++
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~---~~gh---------~~~V~sVawSPdg--Laa 197 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS---DAGS---------KDWVTHIVWYEDV--LVA 197 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS---CTTC---------CCCEEEEEEETTE--EEE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecc---cccc---------cccEEEEEEcCCc--EEE
Confidence 458999999997777667889999998864211 12343222 1222 2345689999999 555
Q ss_pred ECCCCEEEEEc
Q 011333 160 DTMNMAIRKIS 170 (488)
Q Consensus 160 D~~N~rIrkid 170 (488)
-...+.|+.++
T Consensus 198 ss~D~tVrlWd 208 (588)
T 2j04_A 198 ALSNNSVFSMT 208 (588)
T ss_dssp EETTCCEEEEC
T ss_pred EeCCCeEEEEE
Confidence 55678888888
No 272
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=65.56 E-value=1.4e+02 Score=32.11 Aligned_cols=120 Identities=12% Similarity=0.018 Sum_probs=67.6
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..|..|.+|+|||... +-+.+++...+....+..+.-.. .. .+ ..-+....|+.|.+|+|||+-. .
T Consensus 326 v~~i~~D~~g~lWiGt~--~Gl~~~~~~~~~~~~~~~~~~~~-~~----~~----l~~~~v~~i~~d~~g~lWigt~--~ 392 (758)
T 3ott_A 326 FYSLFRDSKGFYWFGGA--NGLIRFTDPAGERHDAIWYRMGD-KT----YP----LSHNRIRHIYEDKEQQLWIATD--G 392 (758)
T ss_dssp EEEEEECTTCCEEEEET--TEEEEESCTTSSCCCCEEECTTC-SS----SC----CSCSCEEEEEECTTSCEEEEET--T
T ss_pred EEEEEEcCCCCEEEeeC--CcceeecccccccceeEEeccCC-cC----CC----CCCCceEEEEECCCCCEEEEeC--C
Confidence 35677788999999863 36888876532111222221100 00 00 0113457899999999999873 4
Q ss_pred EEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 165 AIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 165 rIrkid-~-ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
-|.+++ . +.+..+.-... .+. ..-+...+|+ .|++|+|||+-.+ +-|.+++..
T Consensus 393 GL~~~~~~~~~~~~~~~~~~-------~~~---~~~~~v~~i~-~d~~g~lWigT~~-~Gl~~~~~~ 447 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDN-------TGT---YNTNWTYYIF-EDTAGQLWISTCL-GGIFVVDKH 447 (758)
T ss_dssp EEEEEETTTTEEEEEEEECC-------C-----CBSSSEEEEE-ECTTSEEEEEESS-SCEEEEEHH
T ss_pred cHhhcCcCCCcEEEeecCCC-------cCC---CCCceEEEEE-EcCCCCEEEEECC-CceEEEccc
Confidence 788998 3 33443321000 000 0012335676 7899999998653 457777654
No 273
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=64.68 E-value=84 Score=30.11 Aligned_cols=55 Identities=20% Similarity=0.296 Sum_probs=35.1
Q ss_pred CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCEEEEEc
Q 011333 93 GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 170 (488)
Q Consensus 93 dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rIrkid 170 (488)
+|.||++.. ++.|+.++..+ |++..... +..+.+++++ ++.||+++. ++.|..++
T Consensus 239 ~~~v~~~~~-~g~l~~~d~~t---G~~~w~~~-----------------~~~~~~~~~~-~~~l~~~~~-~g~l~~~d 293 (376)
T 3q7m_A 239 NGVVFALAY-NGNLTALDLRS---GQIMWKRE-----------------LGSVNDFIVD-GNRIYLVDQ-NDRVMALT 293 (376)
T ss_dssp TTEEEEECT-TSCEEEEETTT---CCEEEEEC-----------------CCCEEEEEEE-TTEEEEEET-TCCEEEEE
T ss_pred CCEEEEEec-CcEEEEEECCC---CcEEeecc-----------------CCCCCCceEE-CCEEEEEcC-CCeEEEEE
Confidence 577888753 56788888764 23222211 2224456666 788999985 56788888
No 274
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=62.67 E-value=1.1e+02 Score=29.85 Aligned_cols=107 Identities=11% Similarity=0.062 Sum_probs=57.8
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..|++.++|.++++-..++.|+.++...+. .+..+.+. .+ .. .++..++.+.++-....
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~--~~~~~~~h----~~------------~v--~~~s~~~~~l~sgs~d~ 209 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSH----SA------------RV--GSLSWNSYILSSGSRSG 209 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----SS------------CE--EEEEEETTEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCc--EEEEEeCC----CC------------ce--EEEeeCCCEEEEEeCCC
Confidence 3678888888877777677888888876521 22333221 00 11 23333466666655566
Q ss_pred EEEEEc-CC-C--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 011333 165 AIRKIS-DS-G--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 165 rIrkid-~g-g--VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~ 229 (488)
.|+..+ .. . +.++.+.. ....++. ..+++..+++-...+.|+.++..
T Consensus 210 ~i~~~d~~~~~~~~~~~~~h~-----------------~~~~~~~-~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 210 HIHHHDVRVAEHHVATLSGHS-----------------QEVCGLR-WAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEEEEETTSSSCEEEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEESS
T ss_pred ceeEeeecccceeeEEecccc-----------------cceeeee-ecCCCCeeeeeeccccceEEeec
Confidence 777766 21 1 33333321 1223444 45555555555555666666654
No 275
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=62.41 E-value=19 Score=37.86 Aligned_cols=68 Identities=6% Similarity=0.005 Sum_probs=46.8
Q ss_pred cceEEEcCCCcEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCC
Q 011333 145 PKGLTVDDRGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNR 221 (488)
Q Consensus 145 P~GIAvD~dG~LYVAD~~N~rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~ 221 (488)
...|++.++|..+++=.....|+.++ .+. +.++.+-. ...++|+ +.++|.++++-...+
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~-----------------~~V~sva-~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE-----------------TTITAIG-VSRLHPMVLAGSADG 419 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS-----------------SCEEEEE-CCSSCCBCEEEETTT
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC-----------------CceEEEE-eCCCCCeEEEEECCC
Confidence 35799999998888766677899888 333 35554421 1346777 466777777777778
Q ss_pred eEEEEEcCC
Q 011333 222 AIREIQLHF 230 (488)
Q Consensus 222 rIrkI~~~g 230 (488)
.|+.+++..
T Consensus 420 tv~lwd~~~ 428 (524)
T 2j04_B 420 SLIITNAAR 428 (524)
T ss_dssp EEECCBSCS
T ss_pred EEEEEechH
Confidence 888877643
No 276
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=60.93 E-value=1.2e+02 Score=29.80 Aligned_cols=28 Identities=4% Similarity=0.112 Sum_probs=15.4
Q ss_pred CCeeEEECCCCeEEEEECCCCe----EEEEEcC
Q 011333 201 DFDVVYIGSSCSLLVIDRGNRA----IREIQLH 229 (488)
Q Consensus 201 P~gIa~vd~~G~LYVaD~gN~r----IrkI~~~ 229 (488)
.++++ .++++.++++-..++. |..++..
T Consensus 410 v~~~~-~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 410 VWRIR-ASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEEE-ECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred EEEEE-ecCCEEEEEEcccCCCCccEEEEEECC
Confidence 35566 4556666555544443 6666654
No 277
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=60.74 E-value=1e+02 Score=29.52 Aligned_cols=65 Identities=12% Similarity=0.120 Sum_probs=35.1
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
+.+++++ ++.||+++. ++.|+.++..+ |++....... + -......+++ +|.||+++. ++
T Consensus 270 ~~~~~~~-~~~l~~~~~-~g~l~~~d~~t---G~~~w~~~~~-~-------------~~~~~~~~~~-~~~l~v~~~-~g 328 (376)
T 3q7m_A 270 VNDFIVD-GNRIYLVDQ-NDRVMALTIDG---GVTLWTQSDL-L-------------HRLLTSPVLY-NGNLVVGDS-EG 328 (376)
T ss_dssp EEEEEEE-TTEEEEEET-TCCEEEEETTT---CCEEEEECTT-T-------------TSCCCCCEEE-TTEEEEECT-TS
T ss_pred CCCceEE-CCEEEEEcC-CCeEEEEECCC---CcEEEeeccc-C-------------CCcccCCEEE-CCEEEEEeC-CC
Confidence 3445553 667777764 45777787764 2332221110 0 0011123333 578999885 56
Q ss_pred EEEEEc
Q 011333 165 AIRKIS 170 (488)
Q Consensus 165 rIrkid 170 (488)
.|..++
T Consensus 329 ~l~~~d 334 (376)
T 3q7m_A 329 YLHWIN 334 (376)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 888888
No 278
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=59.70 E-value=1e+02 Score=27.92 Aligned_cols=108 Identities=10% Similarity=0.052 Sum_probs=63.5
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
-..|++.++|+++++-...+.|+.++...+. .+..+.+.. ..-.++..++.+.++-....
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~--~~~~~~~h~------------------~~~~~~~~~~~~l~s~~~~~ 129 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSHS------------------ARVGSLSWNSYILSSGSRSG 129 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCS------------------SCEEEEEEETTEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecCCce--eEEEecCcc------------------ceEEEeecCCCEEEEEecCC
Confidence 3678899999988887778899999987532 233332220 11233444566666655566
Q ss_pred EEEEEc-CCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 011333 165 AIRKIS-DSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 230 (488)
Q Consensus 165 rIrkid-~gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g 230 (488)
.++..+ ... +.++.+.. .....++ ...+++++++-...+.|+.++...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 130 HIHHHDVRVAEHHVATLSGHS-----------------QEVCGLR-WAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEEEEETTSSSCEEEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEESSC
T ss_pred ceEeeecCCCceeEEEEcCcc-----------------CceEEEE-EcCCCCEEEEEecCcceeEEECCC
Confidence 666666 222 33333211 1224455 566677666666677888887653
No 279
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=57.65 E-value=36 Score=33.38 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=63.4
Q ss_pred CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC--------CCcEEEEECCCC
Q 011333 93 GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--------RGNIYIADTMNM 164 (488)
Q Consensus 93 dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~--------dG~LYVAD~~N~ 164 (488)
++.+.++-...+.|+.++...+... .....+. ..||. ..-+.|++.+ +|.++++=...+
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~-~~~~~~~---~~gH~---------~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETII-TQHVLGG---KSGHH---------NFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEE-EEEEECT---TTSCS---------SCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred CCCEEEEEeCCCcEEEEECCCCccc-eeeeecc---cCCCC---------CceEEEEEccccccccCCCCCEEEEEECCC
Confidence 4455555566677887776642111 1122232 23331 1245677765 788888877778
Q ss_pred EEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 011333 165 AIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 231 (488)
Q Consensus 165 rIrkid--~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~ 231 (488)
.||..| .++ +.++.+.. ....+|++.+.+.+++++-...+.|+.+++...
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~-----------------~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLS-----------------SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEEEEETTEEEEEEEECS-----------------SCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred eEEEEECCCCceeeeecCCC-----------------CCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 899888 333 43333321 123577865545566666667889999988753
No 280
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=56.29 E-value=94 Score=28.96 Aligned_cols=56 Identities=11% Similarity=0.203 Sum_probs=33.5
Q ss_pred CceEEEEccCCc-EEEE-EC---CCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EE
Q 011333 84 EPYSVEVLPGGE-LLIL-DS---ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IY 157 (488)
Q Consensus 84 ~P~GIaVd~dG~-LYVa-D~---~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LY 157 (488)
....++++|||. |+++ +. +..+|+.++.++ +....+.... - ..++++.++|+ |+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~---g~~~~l~~~~---------------~--~~~~~wspdg~~l~ 119 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLET---LSSKKILEAK---------------N--IRSLEWNEDSRKLL 119 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT---TEEEEEEEES---------------E--EEEEEECTTSSEEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC---CceEEEEcCC---------------C--ccceeECCCCCEEE
Confidence 456778999997 4444 32 345688888876 3333332210 0 45678888885 55
Q ss_pred EE
Q 011333 158 IA 159 (488)
Q Consensus 158 VA 159 (488)
++
T Consensus 120 ~~ 121 (347)
T 2gop_A 120 IV 121 (347)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 281
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=55.79 E-value=1.2e+02 Score=31.93 Aligned_cols=69 Identities=10% Similarity=0.017 Sum_probs=38.5
Q ss_pred CceEEEEccCCcE-EEEECC--------CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC
Q 011333 84 EPYSVEVLPGGEL-LILDSA--------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 154 (488)
Q Consensus 84 ~P~GIaVd~dG~L-YVaD~~--------n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG 154 (488)
....++++|||.. .++... .+.|+.++..++ ....+... .++ -.....+++.+||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~---~~~~l~~~----~~~---------~~~~~~~~~SPdG 125 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG---DPQSLDPP----EVS---------NAKLQYAGWGPKG 125 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC---CCEECCCT----TCC---------SCCCSBCCBCSST
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCC---ceEeccCC----ccc---------cccccccEECCCC
Confidence 3678999999984 333221 267888888763 33333211 010 1124567778888
Q ss_pred c-EEEEECCCCEEEEEc
Q 011333 155 N-IYIADTMNMAIRKIS 170 (488)
Q Consensus 155 ~-LYVAD~~N~rIrkid 170 (488)
+ |.++.. +.|+.++
T Consensus 126 ~~la~~~~--~~i~~~~ 140 (723)
T 1xfd_A 126 QQLIFIFE--NNIYYCA 140 (723)
T ss_dssp TCEEEEET--TEEEEES
T ss_pred CEEEEEEC--CeEEEEE
Confidence 4 433332 5677777
No 282
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=54.86 E-value=66 Score=33.99 Aligned_cols=69 Identities=10% Similarity=0.127 Sum_probs=40.8
Q ss_pred eEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc-EEEE-EC--
Q 011333 86 YSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA-DT-- 161 (488)
Q Consensus 86 ~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-LYVA-D~-- 161 (488)
.++++.+||.+++++ .++.|+.++..+ +....+.... . . .. .....+++.+||+ |.++ +.
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~---g~~~~~~~~~-~--~--------~~-~~~~~~~~SpDg~~la~~~~~~~ 82 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIET---GQSYTILSNR-T--M--------KS-VNASNYGLSPDRQFVYLESDYSK 82 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSS---CCEEEEECHH-H--H--------HT-TTCSEEEECTTSSEEEEEEEEEE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCC---CcEEEEEccc-c--c--------cc-cceeeEEECCCCCeEEEEecCce
Confidence 356778888755554 467899999886 3444443310 0 0 00 1246789999997 4333 31
Q ss_pred -----CCCEEEEEc
Q 011333 162 -----MNMAIRKIS 170 (488)
Q Consensus 162 -----~N~rIrkid 170 (488)
....|+.++
T Consensus 83 ~~~~s~~~~i~~~d 96 (719)
T 1z68_A 83 LWRYSYTATYYIYD 96 (719)
T ss_dssp CSSSCEEEEEEEEE
T ss_pred eEEeecceEEEEEE
Confidence 135777777
No 283
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=53.31 E-value=27 Score=38.10 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=52.0
Q ss_pred CCceEEEEccCCc-EEEEECCCCeEEEEeCCCCc---cccc----EEEecCCCCccccCCCcccccccCCcceEEEcCCC
Q 011333 83 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSL---YSRP----KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 154 (488)
Q Consensus 83 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~~g~~---~g~i----~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG 154 (488)
.+|+|+-++|||. ++++.-...++.+++...-. .+.+ .++++..+ . =-.|.-.++|++|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~-----------GlGPlHt~Fd~~G 389 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--L-----------GLGPLHTTFDGRG 389 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--C-----------CSCEEEEEECSSS
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--C-----------CCcccEEEECCCC
Confidence 5999999999998 77777778888888865100 0000 11112110 0 1258889999999
Q ss_pred cEEEEECCCCEEEEEc
Q 011333 155 NIYIADTMNMAIRKIS 170 (488)
Q Consensus 155 ~LYVAD~~N~rIrkid 170 (488)
+.|.+=.-...|.|.+
T Consensus 390 ~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 390 NAYTTLFIDSQVVKWN 405 (638)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred ceEeeeeecceEEEEe
Confidence 9999988888899877
No 284
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=52.71 E-value=1.5e+02 Score=28.71 Aligned_cols=128 Identities=11% Similarity=-0.061 Sum_probs=68.0
Q ss_pred ceEEEEcc--------CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCC-c
Q 011333 85 PYSVEVLP--------GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-N 155 (488)
Q Consensus 85 P~GIaVd~--------dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG-~ 155 (488)
-..|++.| ||.++++-...+.|+.+|.... +.+..+.+. -.....|++.|++ +
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~--~~~~~~~~~----------------~~~v~~v~~~p~~~~ 200 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE--GPILAGYPL----------------SSPGISVQFRPSNPN 200 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT--EEEEEEEEC----------------SSCEEEEEEETTEEE
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC--ceeeeecCC----------------CCCcEEEEECCCCCc
Confidence 35677765 7888888777889999986532 233333332 0124578888877 4
Q ss_pred EEEEECCCCEEEEEc-C-CC-cEEEeCCccCCC-C-----CCCCC--CcccccCCCCCeeEEECCCCeEEEEECCCCeEE
Q 011333 156 IYIADTMNMAIRKIS-D-SG-VTTIAGGKWGRG-G-----GHVDG--PSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIR 224 (488)
Q Consensus 156 LYVAD~~N~rIrkid-~-gg-VttIaGg~~g~~-~-----g~~dG--~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIr 224 (488)
++++=...+.|+.+| . +. ............ . ..... ......-..-..+++...++..+++-...+.|+
T Consensus 201 ~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~ 280 (393)
T 4gq1_A 201 QLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWL 280 (393)
T ss_dssp EEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEE
T ss_pred eEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEE
Confidence 555555678888888 2 22 111111100000 0 00000 001111233456776667888888877788888
Q ss_pred EEEcCC
Q 011333 225 EIQLHF 230 (488)
Q Consensus 225 kI~~~g 230 (488)
.+++..
T Consensus 281 vwd~~~ 286 (393)
T 4gq1_A 281 RWNLFA 286 (393)
T ss_dssp EEEC--
T ss_pred EEECcc
Confidence 887653
No 285
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=50.98 E-value=1.8e+02 Score=28.22 Aligned_cols=66 Identities=14% Similarity=0.054 Sum_probs=39.3
Q ss_pred EEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCEE
Q 011333 87 SVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAI 166 (488)
Q Consensus 87 GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rI 166 (488)
-|+..+++.|-|+- .+.|+.++..+ |.+..+... .++ -..-+.|++.++|+++++=...+.|
T Consensus 110 ~l~wS~~n~lAvgl--d~tV~lWd~~t---g~~~~~~~~----~~~---------~~~V~sv~fspdg~~lasgs~Dg~v 171 (420)
T 4gga_A 110 LVDWSSGNVLAVAL--DNSVYLWSASS---GDILQLLQM----EQP---------GEYISSVAWIKEGNYLAVGTSSAEV 171 (420)
T ss_dssp CEEECTTSEEEEEE--TTEEEEEETTT---CCEEEEEEC----CST---------TCCEEEEEECTTSSEEEEEETTSCE
T ss_pred eEEECCCCEEEEEe--CCEEEEEECCC---CCEEEEEEe----cCC---------CCcEEEEEECCCCCEEEEEECCCeE
Confidence 34555554444443 46888888775 333322211 010 1124679999999877776667888
Q ss_pred EEEc
Q 011333 167 RKIS 170 (488)
Q Consensus 167 rkid 170 (488)
+.++
T Consensus 172 ~iWd 175 (420)
T 4gga_A 172 QLWD 175 (420)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8888
No 286
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=49.67 E-value=1.9e+02 Score=28.13 Aligned_cols=62 Identities=8% Similarity=0.107 Sum_probs=36.8
Q ss_pred EEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCEEEE
Q 011333 89 EVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRK 168 (488)
Q Consensus 89 aVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rIrk 168 (488)
++..+|.++++-..++.|+.++..... .+.++.+. .+ .-..|++ +++++++=...+.|+.
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h----~~------------~v~~l~~--~~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLE--CKRILTGH----TG------------SVLCLQY--DERVIITGSSDSTVRV 197 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCC--EEEEECCC----SS------------CEEEEEC--CSSEEEEEETTSCEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCe--EEEEEcCC----CC------------cEEEEEE--CCCEEEEEcCCCeEEE
Confidence 445578877777777899999887522 22333222 11 1234444 5666666556777888
Q ss_pred Ec
Q 011333 169 IS 170 (488)
Q Consensus 169 id 170 (488)
++
T Consensus 198 wd 199 (435)
T 1p22_A 198 WD 199 (435)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 287
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=47.52 E-value=61 Score=34.91 Aligned_cols=119 Identities=18% Similarity=0.108 Sum_probs=58.1
Q ss_pred eEEEEccCCcEEEE--ECCC--CeEEEEeCCCCc----ccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCc--
Q 011333 86 YSVEVLPGGELLIL--DSAN--SNLYRISSSLSL----YSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-- 155 (488)
Q Consensus 86 ~GIaVd~dG~LYVa--D~~n--~rI~kid~~g~~----~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~-- 155 (488)
..++..|||.+++. +... ..|+.++.+++. ...+..+... +..+..+ ...+..+++.+||.
T Consensus 263 ~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~--~~~~~v~-------~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 263 CDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEM--STTGWVG-------RFRPSEPHFTLDGNSF 333 (740)
T ss_dssp EEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEE--CSSSCSS-------SSSCCCCEECTTSSEE
T ss_pred EEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeec--cCCceEc-------cCcCCCceEcCCCCEE
Confidence 35567789984433 3322 368888876532 0012222111 1111111 11245678889997
Q ss_pred E-EEEEC-CCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC------CCeEEE
Q 011333 156 I-YIADT-MNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG------NRAIRE 225 (488)
Q Consensus 156 L-YVAD~-~N~rIrkid-~gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~g------N~rIrk 225 (488)
+ +.++. +...|..++ +++ ...+..+... ...+...| ++.||++... ...|++
T Consensus 334 ~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~-----------------v~~~~~~d-~~~i~f~~~~~~~~~~~~~ly~ 395 (740)
T 4a5s_A 334 YKIISNEEGYRHICYFQIDKKDCTFITKGTWE-----------------VIGIEALT-SDYLYYISNEYKGMPGGRNLYK 395 (740)
T ss_dssp EEEEECTTSCEEEEEEETTCSSCEESCCSSSC-----------------EEEEEEEC-SSEEEEEESCGGGCTTCBEEEE
T ss_pred EEEEEcCCCceEEEEEECCCCceEecccCCEE-----------------EEEEEEEe-CCEEEEEEecCCCCCceeEEEE
Confidence 2 44443 346788888 444 3333322110 11222244 5677776543 346777
Q ss_pred EEcCCC
Q 011333 226 IQLHFD 231 (488)
Q Consensus 226 I~~~g~ 231 (488)
+++++.
T Consensus 396 v~~~g~ 401 (740)
T 4a5s_A 396 IQLIDY 401 (740)
T ss_dssp EETTEE
T ss_pred EECCCC
Confidence 777653
No 288
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=47.36 E-value=28 Score=37.94 Aligned_cols=82 Identities=10% Similarity=0.117 Sum_probs=53.5
Q ss_pred CCcceEEEcCCCc-EEEEECCCCEEEEEcCCCcEE-EeCCccCCCCCCCCCCcccccC-CCCCeeEEECCCCeEEEEECC
Q 011333 143 NHPKGLTVDDRGN-IYIADTMNMAIRKISDSGVTT-IAGGKWGRGGGHVDGPSEDAKF-SNDFDVVYIGSSCSLLVIDRG 219 (488)
Q Consensus 143 n~P~GIAvD~dG~-LYVAD~~N~rIrkid~ggVtt-IaGg~~g~~~g~~dG~~~~a~f-~~P~gIa~vd~~G~LYVaD~g 219 (488)
+.|.|+-++|||. ++++.....++.+|+-..+.. +++.- ....+-...+..+ ..|...+ +|.+|+.|.+=.-
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~----~~~~~~~~ae~e~GlGPlHt~-Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKL----ADPRDVIVGEPELGLGPLHTT-FDGRGNAYTTLFI 397 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCC----SCGGGGEEECCBCCSCEEEEE-ECSSSEEEEEETT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccc----cCcccceEeeccCCCcccEEE-ECCCCceEeeeee
Confidence 8899999999996 888888888888888322111 11100 0000000000111 3699999 6889999999988
Q ss_pred CCeEEEEEcC
Q 011333 220 NRAIREIQLH 229 (488)
Q Consensus 220 N~rIrkI~~~ 229 (488)
...|.|+++.
T Consensus 398 dSqvvkWni~ 407 (638)
T 3sbq_A 398 DSQVVKWNME 407 (638)
T ss_dssp TTEEEEEEHH
T ss_pred cceEEEEecc
Confidence 8899998875
No 289
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=45.95 E-value=1.6e+02 Score=30.72 Aligned_cols=114 Identities=11% Similarity=0.020 Sum_probs=65.6
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceE--EEcCCC-cEEEEEC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGL--TVDDRG-NIYIADT 161 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GI--AvD~dG-~LYVAD~ 161 (488)
...+++.+++ ++++-..++.|+.++...+. ....++.+. . ..-.+| ++.++| .++++=.
T Consensus 269 v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~-~~~~~~~~H--------~--------~~V~sv~~~~s~~g~~~laS~S 330 (524)
T 2j04_B 269 ITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE-VPSFYDQVH--------D--------SYILSVSTAYSDFEDTVVSTVA 330 (524)
T ss_dssp EEEEEESSSS-EEEEEETTSEEEEEETTBCS-SCSEEEECS--------S--------SCEEEEEEECCTTSCCEEEEEE
T ss_pred EEEEEecCCC-eEEEEeCCCEEEEEECCCCC-CceEEeecc--------c--------ccEEEEEEEcCCCCCeEEEEec
Confidence 3567776655 45555667899999987421 011223222 0 112456 446677 7888877
Q ss_pred CCCEEEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 011333 162 MNMAIRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 232 (488)
Q Consensus 162 ~N~rIrkid-~-gg-VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrkI~~~g~~ 232 (488)
..+.|+.+| . +. +.++.+.... .....|++ .+++..+++-...+.|+.+++....
T Consensus 331 ~D~tvklWD~~~~~~~~~~~~~~~~---------------~~v~~v~f-sp~~~~l~s~~~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 331 VDGYFYIFNPKDIATTKTTVSRFRG---------------SNLVPVVY-CPQIYSYIYSDGASSLRAVPSRAAF 388 (524)
T ss_dssp TTSEEEEECGGGHHHHCEEEEECSC---------------CSCCCEEE-ETTTTEEEEECSSSEEEEEETTCTT
T ss_pred cCCeEEEEECCCCCccccccccccc---------------CcccceEe-CCCcCeEEEeCCCCcEEEEECcccc
Confidence 788999998 2 22 3344331100 01356774 4556667776667788888876543
No 290
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=42.62 E-value=2.8e+02 Score=29.84 Aligned_cols=134 Identities=14% Similarity=0.239 Sum_probs=75.7
Q ss_pred CceEEEEcc-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccc----------CCCcc--------c-ccccC
Q 011333 84 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGH----------VDGKP--------R-EARMN 143 (488)
Q Consensus 84 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~----------~dG~a--------~-~a~Ln 143 (488)
+-..|..++ +++++|+-+.. .|++|+.+ |.+...+|...+..+. .+|.+ . +..|.
T Consensus 356 HiNsv~~d~~dd~~liSsR~~-~I~~Id~t----G~V~W~LGg~~~w~~d~~~~~l~Pvd~~G~~~~~~~~~~~~~~~F~ 430 (571)
T 3elq_A 356 HVNSIAYDAKDDSIILSSRHQ-GVVKIGRD----KQVKWILAPSKGWEKPLASKLLKPVDANGKPITCNENGLCENSDFD 430 (571)
T ss_dssp CEEEEEEETTTTEEEEEETTT-EEEEEETT----SCEEEEESCSTTCCTTGGGGBCEEBCTTSCBCCBCTTSCBSSSSCC
T ss_pred EecceeEcCCCCEEEEECCcc-EEEEEcCC----CcEEEEECCCCCCchhhhhhccccccccCcccccccccccccCCCc
Confidence 456777777 55788888877 99999975 5788888865432110 01210 0 02232
Q ss_pred ---CcceEEEcCCCcEEEEECCCC--------------EEEE--EcC--CCcEEEeCCccCCCCCCCCCCcccccCCCCC
Q 011333 144 ---HPKGLTVDDRGNIYIADTMNM--------------AIRK--ISD--SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDF 202 (488)
Q Consensus 144 ---~P~GIAvD~dG~LYVAD~~N~--------------rIrk--id~--ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~ 202 (488)
.-+...+-++|+|.+-|-++. |+.. ||. .+++.+..- +...| ..|.+|.
T Consensus 431 ~~~gQH~a~~~~~g~i~vFDNg~~~~~~~p~~~~~~~SR~l~y~ID~~~~Tv~~vw~y------~~~~g----~~~yS~~ 500 (571)
T 3elq_A 431 FTYTQHTAWISSKGTLTIFDNGDGRHLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEY------GKERG----YDFYSPI 500 (571)
T ss_dssp CCSSCEEEEECTTSCEEEEECCTTGGGSCCSSGGGCCCEEEEEEEETTTTEEEEEEEE------CGGGG----GGGCCSS
T ss_pred cccCCcCeEEcCCCeEEEEeCCCCCCCCcccCCCCCCceEEEEEEcCCCCEEEEEEEe------cCCCC----CCccccc
Confidence 245666667899999996643 3444 663 234444321 00000 1233333
Q ss_pred --eeEEECCCCeEEEEECC-----------CCeEEEEEcCCCce
Q 011333 203 --DVVYIGSSCSLLVIDRG-----------NRAIREIQLHFDDC 233 (488)
Q Consensus 203 --gIa~vd~~G~LYVaD~g-----------N~rIrkI~~~g~~~ 233 (488)
++-.. ++|+.+|...+ ..+|..++.++...
T Consensus 501 ~gs~Q~L-~nGN~li~~g~~~~~~~~g~~~~~~i~E~~~~~~ev 543 (571)
T 3elq_A 501 TSIIEYQ-ADRNTMFGFGGSIHLFDVGQPTVGKLNEIDYKTKEV 543 (571)
T ss_dssp CCEEEEE-TTTTEEEEEEEEETTTSTTSEEEEEEEEEETTTCCE
T ss_pred ccccEEC-CCCCEEEEecccccccccCCCCceeEEEECCCCCEE
Confidence 34433 56777777765 57888888876543
No 291
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=41.26 E-value=1.3e+02 Score=27.86 Aligned_cols=26 Identities=12% Similarity=0.031 Sum_probs=14.6
Q ss_pred cceEEEcCCCc-EEE-EEC---CCCEEEEEc
Q 011333 145 PKGLTVDDRGN-IYI-ADT---MNMAIRKIS 170 (488)
Q Consensus 145 P~GIAvD~dG~-LYV-AD~---~N~rIrkid 170 (488)
...+++.+||. |++ .+. ....|..++
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~ 91 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVAD 91 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEE
Confidence 34577888885 433 332 234577776
No 292
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=39.51 E-value=1.2e+02 Score=32.08 Aligned_cols=25 Identities=8% Similarity=-0.035 Sum_probs=17.6
Q ss_pred eEEEEccCCcEEEE--ECCC--CeEEEEe
Q 011333 86 YSVEVLPGGELLIL--DSAN--SNLYRIS 110 (488)
Q Consensus 86 ~GIaVd~dG~LYVa--D~~n--~rI~kid 110 (488)
..+++.|||.++++ +... .+|+.++
T Consensus 256 ~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 256 SWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp EEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred EEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 57788899987776 3322 4588888
No 293
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=36.84 E-value=2.3e+02 Score=25.39 Aligned_cols=65 Identities=15% Similarity=0.097 Sum_probs=40.2
Q ss_pred EEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCEEE
Q 011333 88 VEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIR 167 (488)
Q Consensus 88 IaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rIr 167 (488)
|+.++++.|-++ ..+.|+.++..++. .+.++.+. + + -..-+.|++.++|+++++=...+.|+
T Consensus 31 l~WS~~~~lAvg--~D~tV~iWd~~tg~--~~~~~~~~--~---~---------~~~V~~v~~~~~~~~l~sgs~Dg~v~ 92 (318)
T 4ggc_A 31 VDWSSGNVLAVA--LDNSVYLWSASSGD--ILQLLQME--Q---P---------GEYISSVAWIKEGNYLAVGTSSAEVQ 92 (318)
T ss_dssp EEECTTSEEEEE--ETTEEEEEETTTCC--EEEEEECC--S---T---------TCCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEECCCCEEEEE--eCCEEEEEECCCCC--EEEEEEec--C---C---------CCeEEEEEECCCCCEEEEEECCCcEE
Confidence 566666544333 25688888887522 22333221 1 1 11235799999999888777788899
Q ss_pred EEc
Q 011333 168 KIS 170 (488)
Q Consensus 168 kid 170 (488)
..+
T Consensus 93 iw~ 95 (318)
T 4ggc_A 93 LWD 95 (318)
T ss_dssp EEE
T ss_pred Eee
Confidence 988
No 294
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=35.65 E-value=70 Score=32.23 Aligned_cols=70 Identities=6% Similarity=0.009 Sum_probs=47.6
Q ss_pred CceEEEEccC-CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 84 EPYSVEVLPG-GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 84 ~P~GIaVd~d-G~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
....|+++++ +.++++-..++.|+.++..... .+....+ + -.....++++++|+.+++=..
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~--~~~~~~~-------~---------~~~v~~v~wspdg~~lasgs~ 212 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV--KVCATLP-------S---------TVAVTSVCWSPKGKQLAVGKQ 212 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEESSSE--EEEEEEC-------G---------GGCEEEEEECTTSSCEEEEET
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc--ceeeccC-------C---------CCceeEEEEcCCCCEEEEEcC
Confidence 4678999987 7888877778899999886421 1111111 1 124678999999976555556
Q ss_pred CCEEEEEcC
Q 011333 163 NMAIRKISD 171 (488)
Q Consensus 163 N~rIrkid~ 171 (488)
++.|+.++.
T Consensus 213 dg~v~iwd~ 221 (434)
T 2oit_A 213 NGTVVQYLP 221 (434)
T ss_dssp TSCEEEECT
T ss_pred CCcEEEEcc
Confidence 788999983
No 295
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=35.65 E-value=3.8e+02 Score=28.28 Aligned_cols=29 Identities=10% Similarity=0.091 Sum_probs=19.6
Q ss_pred eEEEEccCCc-E-EEEECC-CC--eEEEEeCCCC
Q 011333 86 YSVEVLPGGE-L-LILDSA-NS--NLYRISSSLS 114 (488)
Q Consensus 86 ~GIaVd~dG~-L-YVaD~~-n~--rI~kid~~g~ 114 (488)
.+++++|||. | |.++.. +. .|+.++..++
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg 161 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA 161 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC
Confidence 4678899998 3 344433 32 8999998863
No 296
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=33.18 E-value=2.7e+02 Score=29.52 Aligned_cols=113 Identities=7% Similarity=0.020 Sum_probs=58.3
Q ss_pred eEEEEccCCc-EEEEECC------------CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcC
Q 011333 86 YSVEVLPGGE-LLILDSA------------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD 152 (488)
Q Consensus 86 ~GIaVd~dG~-LYVaD~~------------n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~ 152 (488)
.+++..+||. |+.+... ..+|++++..++.. .-.++.... +. -..-.++++++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~-~~~lv~~~~-~~------------~~~~~~~~~Sp 236 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS-KDTVVHERT-GD------------PTTFLQSDLSR 236 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG-GCEEEECCC-CC------------TTCEEEEEECT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch-hceEEEecC-CC------------CEEEEEEEECC
Confidence 5678889987 5544331 34599888875321 112332211 00 01124688999
Q ss_pred CCc-EEEE--EC-CCCEEEEEcC--CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC---CCCeE
Q 011333 153 RGN-IYIA--DT-MNMAIRKISD--SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR---GNRAI 223 (488)
Q Consensus 153 dG~-LYVA--D~-~N~rIrkid~--ggVttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~---gN~rI 223 (488)
||. |+++ +. .+..|+.++. +.+..+..... .-...+ . ++|.||+.-. .+.+|
T Consensus 237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-----------------~~~~~~-~-~~g~l~~~s~~~~~~~~l 297 (695)
T 2bkl_A 237 DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG-----------------AKYEVH-A-WKDRFYVLTDEGAPRQRV 297 (695)
T ss_dssp TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS-----------------CCEEEE-E-ETTEEEEEECTTCTTCEE
T ss_pred CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC-----------------ceEEEE-e-cCCcEEEEECCCCCCCEE
Confidence 996 3332 22 3457888872 34555543211 112222 2 2333665432 36788
Q ss_pred EEEEcCCC
Q 011333 224 REIQLHFD 231 (488)
Q Consensus 224 rkI~~~g~ 231 (488)
+.+++.+.
T Consensus 298 ~~~d~~~~ 305 (695)
T 2bkl_A 298 FEVDPAKP 305 (695)
T ss_dssp EEEBTTBC
T ss_pred EEEeCCCC
Confidence 88887643
No 297
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=30.75 E-value=4.4e+02 Score=27.58 Aligned_cols=69 Identities=13% Similarity=0.129 Sum_probs=36.5
Q ss_pred CCcEEEEECCCCeEEEEeC-CCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCEEEEEc
Q 011333 93 GGELLILDSANSNLYRISS-SLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 170 (488)
Q Consensus 93 dG~LYVaD~~n~rI~kid~-~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rIrkid 170 (488)
+|.||++...+++|+.+|. .+ |+...-....... +. ....+.-....+++++ +|.|||... .++|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~t---G~~~W~~~~~~~~-~~---~~~~~~~~~~~~~~~~-~~~v~v~~~-dg~l~alD 131 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDP---GKIVWQHKPKQDA-ST---KAVMCCDVVDRGLAYG-AGQIVKKQA-NGHLLALD 131 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCT---TSEEEEECCCCCG-GG---GGGCTTCSCCCCCEEE-TTEEEEECT-TSEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCC---ccEEEEEcCCCCc-cc---cccccccccccccEEE-CCEEEEEeC-CCEEEEEE
Confidence 6789988764568899997 54 3333222110000 00 0000000012356665 678988853 67889998
No 298
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=30.31 E-value=4.2e+02 Score=28.27 Aligned_cols=14 Identities=21% Similarity=0.589 Sum_probs=9.3
Q ss_pred ceEEEcCC-CcEEEE
Q 011333 146 KGLTVDDR-GNIYIA 159 (488)
Q Consensus 146 ~GIAvD~d-G~LYVA 159 (488)
.++++|++ |.+||.
T Consensus 384 ~~~a~dp~~g~~yv~ 398 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIP 398 (668)
T ss_dssp SCCEEETTTTEEEEE
T ss_pred CcceECCCCCEEEEe
Confidence 35889985 456663
No 299
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=29.87 E-value=1.5e+02 Score=27.65 Aligned_cols=69 Identities=14% Similarity=0.123 Sum_probs=42.1
Q ss_pred eEEEEcc--CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCC--CcEEEEEC
Q 011333 86 YSVEVLP--GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR--GNIYIADT 161 (488)
Q Consensus 86 ~GIaVd~--dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~d--G~LYVAD~ 161 (488)
..|++.+ +|+++++-...+.|+.++...+....+..+.+. -..-+.|++.++ |.++++=.
T Consensus 61 ~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h----------------~~~V~~v~~~p~~~g~~lasgs 124 (316)
T 3bg1_A 61 WQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGH----------------DSSVNSVCWAPHDYGLILACGS 124 (316)
T ss_dssp EEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCC----------------SSCCCEEEECCTTTCSCEEEEC
T ss_pred EEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCC----------------CCceEEEEECCCCCCcEEEEEc
Confidence 5667754 477777666678899998764211122222221 112467888876 77777666
Q ss_pred CCCEEEEEc
Q 011333 162 MNMAIRKIS 170 (488)
Q Consensus 162 ~N~rIrkid 170 (488)
..+.|+.++
T Consensus 125 ~D~~i~lwd 133 (316)
T 3bg1_A 125 SDGAISLLT 133 (316)
T ss_dssp SSSCEEEEE
T ss_pred CCCCEEEEe
Confidence 677777777
No 300
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=29.64 E-value=3.9e+02 Score=25.82 Aligned_cols=20 Identities=15% Similarity=0.056 Sum_probs=12.5
Q ss_pred CCeEEEEECCCCeEEEEEcC
Q 011333 210 SCSLLVIDRGNRAIREIQLH 229 (488)
Q Consensus 210 ~G~LYVaD~gN~rIrkI~~~ 229 (488)
++..+++-..++.|+.+++.
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHH
T ss_pred cCCEEEEEeCCCcEEEEECC
Confidence 45555555566777777764
No 301
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=27.09 E-value=2.5e+02 Score=22.68 Aligned_cols=26 Identities=19% Similarity=0.362 Sum_probs=18.5
Q ss_pred CCceEEEEccCCcEEEEECCCCeEEE
Q 011333 83 IEPYSVEVLPGGELLILDSANSNLYR 108 (488)
Q Consensus 83 ~~P~GIaVd~dG~LYVaD~~n~rI~k 108 (488)
..+..+.+..||+|.+.|..+..|+.
T Consensus 50 ~~~~~L~l~~dGnLvL~d~~~~~vWs 75 (105)
T 4h3o_A 50 KSGCSAVLQSDGNFVVYDSSGRSLWA 75 (105)
T ss_dssp CCSCEEEECTTSCEEEECTTCCEEEE
T ss_pred CccEEEEEeCCccEEEECCCcEEEEE
Confidence 34567888889999888876555543
No 302
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=25.17 E-value=5.3e+02 Score=25.86 Aligned_cols=69 Identities=10% Similarity=0.058 Sum_probs=36.9
Q ss_pred ceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCC
Q 011333 85 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 164 (488)
Q Consensus 85 P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~ 164 (488)
++.|++ .+..|+|+ .++.|..++...-. ......... .. -...++..|+=+++..+|.|++.|-.+.
T Consensus 90 V~~l~f-d~~~L~v~--~~~~l~v~dv~sl~--~~~~~~~~~-------~~-v~~i~~~~p~~av~~~dG~L~v~dl~~~ 156 (388)
T 1xip_A 90 VIFVCF-HGDQVLVS--TRNALYSLDLEELS--EFRTVTSFE-------KP-VFQLKNVNNTLVILNSVNDLSALDLRTK 156 (388)
T ss_dssp EEEEEE-ETTEEEEE--ESSEEEEEESSSTT--CEEEEEECS-------SC-EEEEEECSSEEEEEETTSEEEEEETTTC
T ss_pred eeEEEE-CCCEEEEE--cCCcEEEEEchhhh--ccCccceee-------cc-eeeEEecCCCEEEEECCCCEEEEEccCC
Confidence 788899 33447777 45789999875321 111111110 00 0112344555344456788888887644
Q ss_pred EE
Q 011333 165 AI 166 (488)
Q Consensus 165 rI 166 (488)
..
T Consensus 157 ~~ 158 (388)
T 1xip_A 157 ST 158 (388)
T ss_dssp CE
T ss_pred cc
Confidence 43
No 303
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=25.03 E-value=2.8e+02 Score=29.93 Aligned_cols=23 Identities=4% Similarity=0.070 Sum_probs=15.8
Q ss_pred eEEEcCCCcEEEEECCCCEEEEEc
Q 011333 147 GLTVDDRGNIYIADTMNMAIRKIS 170 (488)
Q Consensus 147 GIAvD~dG~LYVAD~~N~rIrkid 170 (488)
|..+...|.||++ +..+.|+.+|
T Consensus 480 g~~~tagglvf~g-t~dg~l~a~D 502 (689)
T 1yiq_A 480 GTLSTAGNLVFEG-SADGRVIAYA 502 (689)
T ss_dssp CEEEETTTEEEEE-CTTSEEEEEE
T ss_pred ccceECCCEEEEE-CCCCcEEEEE
Confidence 3444445667777 4578999999
No 304
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=23.88 E-value=6.8e+02 Score=26.62 Aligned_cols=17 Identities=24% Similarity=0.364 Sum_probs=10.8
Q ss_pred cCCCcEEEEECCCCEEE
Q 011333 151 DDRGNIYIADTMNMAIR 167 (488)
Q Consensus 151 D~dG~LYVAD~~N~rIr 167 (488)
+.+|.||+-|..++++.
T Consensus 321 ~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 321 PKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp CTTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCCEe
Confidence 35667777777665544
No 305
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=23.83 E-value=2.3e+02 Score=23.13 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=13.5
Q ss_pred eEEEcCCCcEEEEECCC
Q 011333 147 GLTVDDRGNIYIADTMN 163 (488)
Q Consensus 147 GIAvD~dG~LYVAD~~N 163 (488)
-+.+..+|+|++.|..+
T Consensus 60 ~l~l~~dGNLVl~d~~~ 76 (113)
T 3mez_B 60 FMRLGHSGELDITDDRL 76 (113)
T ss_dssp EEEECTTSCEEEECTTS
T ss_pred EEEEeCCCcEEEECCCC
Confidence 47888899999998643
No 306
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=23.46 E-value=6.6e+02 Score=26.35 Aligned_cols=65 Identities=8% Similarity=0.195 Sum_probs=34.4
Q ss_pred eEEEEccCCc-EEEE--EC-CCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEEC
Q 011333 86 YSVEVLPGGE-LLIL--DS-ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 161 (488)
Q Consensus 86 ~GIaVd~dG~-LYVa--D~-~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~ 161 (488)
.++++++||. |+++ +. .+..|+.++..+ +.+..+.... + .-...+. ++|.||+.-.
T Consensus 230 ~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~---~~~~~l~~~~-------~---------~~~~~~~-~~g~l~~~s~ 289 (695)
T 2bkl_A 230 LQSDLSRDGKYLFVYILRGWSENDVYWKRPGE---KDFRLLVKGV-------G---------AKYEVHA-WKDRFYVLTD 289 (695)
T ss_dssp EEEEECTTSCCEEEEEEETTTEEEEEEECTTC---SSCEEEEECS-------S---------CCEEEEE-ETTEEEEEEC
T ss_pred EEEEECCCCCEEEEEEeCCCCceEEEEEcCCC---CceEEeecCC-------C---------ceEEEEe-cCCcEEEEEC
Confidence 4677888887 3333 22 345788776544 3444554321 0 0112222 3444666533
Q ss_pred ---CCCEEEEEc
Q 011333 162 ---MNMAIRKIS 170 (488)
Q Consensus 162 ---~N~rIrkid 170 (488)
.+.+|.+++
T Consensus 290 ~~~~~~~l~~~d 301 (695)
T 2bkl_A 290 EGAPRQRVFEVD 301 (695)
T ss_dssp TTCTTCEEEEEB
T ss_pred CCCCCCEEEEEe
Confidence 368899888
No 307
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=23.42 E-value=4.8e+02 Score=26.16 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=46.9
Q ss_pred ccCCc--EEEEECCCC--eEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcc-eEEEcCCCcEEEEECCCCE
Q 011333 91 LPGGE--LLILDSANS--NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPK-GLTVDDRGNIYIADTMNMA 165 (488)
Q Consensus 91 d~dG~--LYVaD~~n~--rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~-GIAvD~dG~LYVAD~~N~r 165 (488)
+.+|. ||.-+...+ .|..+|.+.... +..+.=...|..| ...+. ++-+-....|||.+....+
T Consensus 35 ~~~~k~yL~~~N~~~~~~~i~~iDL~~~kl--~k~i~~ekEGPNg----------i~~~~~~~~i~~~DsI~i~~~~~~~ 102 (369)
T 3s9j_A 35 EENGKEYLHFENTQKSLYDIVIFDIENQQI--AKRIPLHKTGPNG----------LPAVFGSRPSPDSQYILVAQNNISR 102 (369)
T ss_dssp EETTEEEEEEEECSTTCCEEEEEETTTTEE--EEEEECBSSSTTB----------CTTCCCEEESSSTTSEEEEEGGGTE
T ss_pred ecCCcEEEEEeCCCCCcCcEEEEECCCCce--eeeeccccCCCCC----------cccceeeEEecCCCEEEEEeCCcce
Confidence 35564 777787777 999999986331 1111111123222 34464 5777788899999988889
Q ss_pred EEEEc-CCCc
Q 011333 166 IRKIS-DSGV 174 (488)
Q Consensus 166 Irkid-~ggV 174 (488)
|..++ .|.+
T Consensus 103 i~l~n~~G~~ 112 (369)
T 3s9j_A 103 LSSINSQGEI 112 (369)
T ss_dssp EEEECTTCCE
T ss_pred EEEECCCceE
Confidence 99999 5664
No 308
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=23.39 E-value=6.7e+02 Score=26.37 Aligned_cols=71 Identities=11% Similarity=0.053 Sum_probs=38.4
Q ss_pred eEEEEccCCc-EEEEECC---------------CCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEE
Q 011333 86 YSVEVLPGGE-LLILDSA---------------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLT 149 (488)
Q Consensus 86 ~GIaVd~dG~-LYVaD~~---------------n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIA 149 (488)
.+++..+||. ||++... ..+|++++..++.. .-.++.... .. -....+++
T Consensus 174 ~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~-~~~~v~~~~-~~------------~~~~~~~~ 239 (710)
T 2xdw_A 174 SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQS-EDILCAEFP-DE------------PKWMGGAE 239 (710)
T ss_dssp CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGG-GCEEEECCT-TC------------TTCEEEEE
T ss_pred ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcc-cceEEeccC-CC------------CeEEEEEE
Confidence 4678888886 5555322 24588888765321 112222210 00 01134788
Q ss_pred EcCCCc-EEE-EECC---CCEEEEEc
Q 011333 150 VDDRGN-IYI-ADTM---NMAIRKIS 170 (488)
Q Consensus 150 vD~dG~-LYV-AD~~---N~rIrkid 170 (488)
+++||. |++ +... +..|+.++
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d 265 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCD 265 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEE
Confidence 999996 333 3322 56888887
No 309
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=23.02 E-value=4.9e+02 Score=26.13 Aligned_cols=118 Identities=10% Similarity=0.054 Sum_probs=61.3
Q ss_pred CceEEEEccCCcEEEEECCCCeEEEEeCCCCcccccE-EEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECC
Q 011333 84 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPK-LVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 162 (488)
Q Consensus 84 ~P~GIaVd~dG~LYVaD~~n~rI~kid~~g~~~g~i~-tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~ 162 (488)
.-+-+++++...|+++-..+ .++.++.+. +. .+.... +. ........+..+..|++ ....|+|+ .
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~-----l~~~~~~~~-~~----~~~~~~~~lp~V~~l~f-d~~~L~v~--~ 104 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQL-----LRDHITSDS-TP----LTFKWEKEIPDVIFVCF-HGDQVLVS--T 104 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHH-----HHHHHHSSS-CC----CCCSEEEECTTEEEEEE-ETTEEEEE--E
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhH-----hhhhhcccc-cc----ccceEEeeCCCeeEEEE-CCCEEEEE--c
Confidence 34678898877777765544 555565431 00 000000 00 01111122444888999 33457777 4
Q ss_pred CCEEEEEcCCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEE
Q 011333 163 NMAIRKISDSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIRE 225 (488)
Q Consensus 163 N~rIrkid~gg---VttIaGg~~g~~~g~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD~gN~rIrk 225 (488)
+..|+.++-.. ..++..-... ....++..|+ ++++..+|.|++.|-.++....
T Consensus 105 ~~~l~v~dv~sl~~~~~~~~~~~~---------v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 105 RNALYSLDLEELSEFRTVTSFEKP---------VFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp SSEEEEEESSSTTCEEEEEECSSC---------EEEEEECSSE-EEEEETTSEEEEEETTTCCEEE
T ss_pred CCcEEEEEchhhhccCccceeecc---------eeeEEecCCC-EEEEECCCCEEEEEccCCcccc
Confidence 57899998221 2222111000 1122333443 7778889999999987665544
No 310
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=20.78 E-value=6.5e+02 Score=25.24 Aligned_cols=58 Identities=10% Similarity=-0.031 Sum_probs=36.6
Q ss_pred EEEEcc---CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccCCCcccccccCCcceEEEcCCCcEEEE
Q 011333 87 SVEVLP---GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA 159 (488)
Q Consensus 87 GIaVd~---dG~LYVaD~~n~rI~kid~~g~~~g~i~tvaG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVA 159 (488)
.+++.+ +|+++++-...+.|+.++..++. .+.++.+... ....-..+++.++|.+.++
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--~l~tL~g~~~-------------~v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--LLKKMHIDDS-------------YQASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCC--EEEEEECCC----------------CCCEEEEEEETTEEEEE
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCc--EEEEEcCCCc-------------ceeeeEEEEECCCCCEEEE
Confidence 455555 77899998888999999998632 3455544210 0123345677888876654
No 311
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=20.53 E-value=3.1e+02 Score=22.04 Aligned_cols=18 Identities=22% Similarity=0.366 Sum_probs=13.9
Q ss_pred ceEEEcCCCcEEEEECCC
Q 011333 146 KGLTVDDRGNIYIADTMN 163 (488)
Q Consensus 146 ~GIAvD~dG~LYVAD~~N 163 (488)
.-+.+..+|+|.+-|..+
T Consensus 52 ~~l~l~~dGNLvl~~~~~ 69 (109)
T 3dzw_A 52 CHLSMQSDGNLVVYSPRN 69 (109)
T ss_dssp CEEEECTTSCEEEECTTS
T ss_pred EEEEEeCCCCEEEECCCC
Confidence 347888899999998644
No 312
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=20.28 E-value=5.8e+02 Score=27.27 Aligned_cols=110 Identities=9% Similarity=-0.046 Sum_probs=0.0
Q ss_pred eEEEEccCCcEEEEECCC-------------------------------------------CeEEEEeCCCCcccccEEE
Q 011333 86 YSVEVLPGGELLILDSAN-------------------------------------------SNLYRISSSLSLYSRPKLV 122 (488)
Q Consensus 86 ~GIaVd~dG~LYVaD~~n-------------------------------------------~rI~kid~~g~~~g~i~tv 122 (488)
.++++|+++.++++...+ +.|..+|..+ |++..-
T Consensus 396 ~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t---G~~~W~ 472 (677)
T 1kb0_A 396 HPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA---QKAAWS 472 (677)
T ss_dssp SCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT---TEEEEE
T ss_pred CCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC---CcEEee
Q ss_pred ecCCCCccccCCCcccccccCCcceEEEcCCCcEEEEECCCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCC
Q 011333 123 AGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSN 200 (488)
Q Consensus 123 aG~~~G~~G~~dG~a~~a~Ln~P~GIAvD~dG~LYVAD~~N~rIrkid--~ggVttIaGg~~g~~~g~~dG~~~~a~f~~ 200 (488)
.... ...-.+......|.+|++ +..+.++.+| +|.+.--.....+. .
T Consensus 473 ~~~~---------------~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~~~---------------~ 521 (677)
T 1kb0_A 473 VEHV---------------SPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLWEAPTGTGV---------------V 521 (677)
T ss_dssp EEES---------------SSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCC---------------C
T ss_pred cCCC---------------CCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCceeeeeeCCCCc---------------c
Q ss_pred CCeeEEECCCCeEEEEECCC-----------------CeEEEEEcCC
Q 011333 201 DFDVVYIGSSCSLLVIDRGN-----------------RAIREIQLHF 230 (488)
Q Consensus 201 P~gIa~vd~~G~LYVaD~gN-----------------~rIrkI~~~g 230 (488)
-.-++ ...+|.+||+-... +.|..+.+.+
T Consensus 522 ~~p~~-y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 522 AAPST-YMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp SCCEE-EEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred cCCEE-EEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Done!