Your job contains 1 sequence.
>011336
MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA
ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR
YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ
SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC
GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC
LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE
IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR
PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE
MEEDTGLA
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011336
(488 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 1944 7.3e-201 1
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 556 8.9e-54 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 429 2.6e-40 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 389 7.2e-35 1
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 377 1.5e-33 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 372 4.7e-33 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 370 7.5e-33 1
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 360 9.8e-33 2
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 360 9.8e-33 2
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 367 1.6e-32 1
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 364 4.2e-32 2
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 361 5.2e-32 1
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 358 6.4e-32 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 358 6.4e-32 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 358 6.4e-32 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 358 6.4e-32 2
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 361 7.2e-32 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 358 1.0e-31 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 358 1.1e-31 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 360 1.1e-31 2
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 359 1.1e-31 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 357 2.2e-31 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 360 2.4e-31 2
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 360 2.4e-31 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 360 2.5e-31 2
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 358 2.9e-31 1
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 357 3.2e-31 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 357 4.1e-31 2
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 357 7.4e-31 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 353 5.7e-30 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 352 6.3e-30 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 356 9.1e-30 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 351 9.7e-30 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 351 9.9e-30 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 349 1.9e-29 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 345 7.2e-29 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 343 1.3e-28 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 341 2.4e-28 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 341 2.4e-28 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 352 2.5e-28 2
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 340 3.1e-28 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 340 3.3e-28 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 340 5.3e-28 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 337 7.5e-28 1
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 336 1.0e-27 1
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 307 4.6e-27 1
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 305 7.8e-27 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 323 3.7e-26 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 296 8.2e-26 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 319 1.1e-25 1
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 318 1.5e-25 1
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 318 1.5e-25 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 320 2.4e-25 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 318 3.1e-25 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 307 5.3e-25 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 307 1.4e-24 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 308 2.2e-24 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 300 3.6e-24 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 305 4.9e-24 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 297 8.1e-24 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 293 2.9e-23 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 297 3.8e-23 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 291 4.1e-23 1
UNIPROTKB|Q7ZZC8 - symbol:nek9 "Serine/threonine-protein ... 296 4.4e-23 1
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 296 4.5e-23 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 291 4.7e-23 1
TAIR|locus:2035423 - symbol:AT1G19880 species:3702 "Arabi... 250 5.0e-23 2
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 290 5.3e-23 1
UNIPROTKB|F1NAG9 - symbol:NEK9 "Uncharacterized protein" ... 295 6.2e-23 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 289 8.0e-23 1
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 294 8.4e-23 1
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 288 9.1e-23 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 293 1.1e-22 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 290 2.3e-22 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 284 2.7e-22 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 287 5.0e-22 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 287 5.3e-22 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 285 8.0e-22 1
UNIPROTKB|E2QYP0 - symbol:NEK9 "Uncharacterized protein" ... 283 1.4e-21 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 282 1.9e-21 1
UNIPROTKB|F1S2Q4 - symbol:NEK9 "Uncharacterized protein" ... 282 1.9e-21 1
RGD|1307187 - symbol:Nek9 "NIMA-related kinase 9" species... 281 2.4e-21 1
MGI|MGI:2387995 - symbol:Nek9 "NIMA (never in mitosis gen... 281 2.4e-21 1
UNIPROTKB|F1MM88 - symbol:NEK9 "Uncharacterized protein" ... 279 4.0e-21 1
DICTYBASE|DDB_G0282575 - symbol:DDB_G0282575 "putative GT... 194 4.8e-21 2
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 278 5.2e-21 1
UNIPROTKB|Q8TD19 - symbol:NEK9 "Serine/threonine-protein ... 281 1.4e-20 2
DICTYBASE|DDB_G0282633 - symbol:DDB_G0282633 "putative gu... 273 1.7e-20 1
UNIPROTKB|F1S9B1 - symbol:SERGEF "Uncharacterized protein... 248 1.8e-20 1
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 263 4.2e-20 1
MGI|MGI:1918677 - symbol:Ibtk "inhibitor of Bruton agamma... 270 6.5e-20 1
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 267 9.4e-20 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 251 1.1e-19 1
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 245 2.2e-19 1
FB|FBgn0031769 - symbol:CG9135 species:7227 "Drosophila m... 170 3.2e-19 2
WB|WBGene00017195 - symbol:glo-4 species:6239 "Caenorhabd... 177 3.3e-19 2
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 259 7.2e-19 1
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 251 9.6e-19 1
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 254 1.4e-18 1
UNIPROTKB|F1RQL8 - symbol:IBTK "Uncharacterized protein" ... 258 1.4e-18 1
WARNING: Descriptions of 120 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 1944 (689.4 bits), Expect = 7.3e-201, P = 7.3e-201
Identities = 362/478 (75%), Positives = 403/478 (84%)
Query: 1 MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
MADR L S E+LPSHLI E+LTSGRLSAVDL LELTSK FGGSHG YP KFRSL D A
Sbjct: 1 MADRNCLISFEDLPSHLILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60
Query: 61 ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
ASQLC++H +Y GM Q EL C GNWKR+ FLQSVE SSD+VETS G MQI TG+
Sbjct: 61 ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGK 120
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
SGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+ GH +TC
Sbjct: 181 SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTC 240
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
GSNTHGQLGHGDTLDRP PK + L+ +G VVQIAAGPSY+LAVT +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC 300
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDE 360
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
DK P+ L +L + LAVQVCARKRKTFVLV+ G +YGFGWMGFGSLGFPDRGVSDKVLR
Sbjct: 361 NDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLR 420
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
PR+L+ L+ H VSQ+STGLYHT+VVT RGR+FGFGDNERAQLGHD+LRGCLEPTEIF+
Sbjct: 421 PRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEIFL 478
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 167/477 (35%), Positives = 233/477 (48%)
Query: 8 FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
F + PS ++ +LT RL DLA+LE T F P SL +LAA +C
Sbjct: 46 FPLAANPS-IVLHVLTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNK 104
Query: 68 HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
I+ M+ + E+ RC G+WK VLRFL + E E S Q G H++ +
Sbjct: 105 RVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRR-EKS----QAVAGPGHSVAVT 159
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
S V++ G + G LGHG T + ++Q +A + G+V+
Sbjct: 160 SKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYA 218
Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
CG S G + T +P+ P+LV +LK + Q G FT L+ G V+T
Sbjct: 219 CGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGN 277
Query: 245 HGQLGHG-DTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSNF 299
G+LGH + D P P + PLE V VVQIAAG Y+LA+ NG+ VYS G G
Sbjct: 278 DGRLGHQTEAADVEPRPL-LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCGLGG 335
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
LGHG + DE PR I+ F+ + V+AG H + G V TWG G G LGHG+
Sbjct: 336 KLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 395
Query: 360 EIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDRGV 414
E +++P+ + L SH+ AV V TFV+ D G VY FG SLG F ++G
Sbjct: 396 EECESVPKVVEGL-SHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGN 454
Query: 415 SD-KVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG 463
VL P ++ SL+ + QIS +Y HT +T+ G+LF FG ++ QLG
Sbjct: 455 RHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLG 511
Score = 318 (117.0 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 95/306 (31%), Positives = 151/306 (49%)
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
Q A H+ V G+V+T G N+S GH T R + V +L+GV Q AG
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEA-RIQPVRSLQGVRIIQAAAGAA 205
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAV 284
T ++ G V+ CG + G+ +G +P TP+ + L+ + VVQ A G + +
Sbjct: 206 RTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNI-FVVQAAIGNYFTAVL 264
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--DSSG 342
+ G VY+F G++ LGH + +++PR + + + VV+++AG +++AL +G
Sbjct: 265 SREGKVYTFSWGNDGRLGHQTEAADVEPRPLLG-PLENVPVVQIAAGYCYLLALACQPNG 323
Query: 343 Y-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYG 398
VY+ G G G LGHG D+ P + + L +Q V A V+ G V
Sbjct: 324 MSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQI-LNLQPRVVAAGAWHAAVVGQDGRVCT 382
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
+GW +G LG G + P++++ L ++TG Y T VV+D G ++ FG E
Sbjct: 383 WGWGRYGCLG---HGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGE 439
Query: 459 RAQLGH 464
A LGH
Sbjct: 440 SASLGH 445
Score = 208 (78.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 49/144 (34%), Positives = 73/144 (50%)
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
AG H VA+ S G VYT+G G LGHG D+ +P+ SL+ +Q A +T +
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 209
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
+ D G VY G FG + +G V P+++ SL+ V Q + G Y T V++ G
Sbjct: 210 ISDDGKVYACGKESFGEAEYGGQGTKP-VTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 268
Query: 450 RLFGFGDNERAQLGHDTLRGCLEP 473
+++ F +LGH T +EP
Sbjct: 269 KVYTFSWGNDGRLGHQTEAADVEP 292
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 112/350 (32%), Positives = 174/350 (49%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I+ G H++ L+S V S G G LGHG + S T+++ +V V+ +H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78
Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
QSG +V++ G GH +++ +F P ++AL G+ KQ+ G + +T+
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V + G N +GQLG GDT D P+ I E + + +AAG + AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G G LG G++ D L P + + G + V+ G H +++ SG +YT+G G
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254
Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LGHGD D +P L +L + Q+ R T L G +YG+GW FG +G +
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
++ R D + V Q+S G HT+ VT+R +F +G QLG
Sbjct: 315 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 111/315 (35%), Positives = 163/315 (51%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
V+ +SA +H+ +L V + G GH D +RP P + AL G VT
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTC 74
Query: 224 GLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
G + T + G V++ G G+LGHG++ D TP I L + + QIA G S+ L
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCL 133
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
AVT G V S+G N LG G+ D L P+ IQ F +GI + V+AG EH A+ G
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDG 191
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
+Y WG G G LG GD D+ +PE ++S V R T + +G++Y +GW
Sbjct: 192 DLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWS 251
Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
+G LG D + D ++ P L++L +SQIS G HT+ +T G+L+G+G N+ Q+
Sbjct: 252 KYGQLGHGD--LEDHLI-PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV 308
Query: 463 G-HDTLRGCLEPTEI 476
G + L C P ++
Sbjct: 309 GVGNNLDQC-SPVQV 322
Score = 248 (92.4 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 75/260 (28%), Positives = 118/260 (45%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
QI G H L ++ V S G + G LG G +T + +I + V+A
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H A V + G ++ G G D T+R + P V + G V G T ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 240
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G ++T G + +GQLGHGD D P + L + QI+ G + +A+T +G +Y
Sbjct: 241 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 299
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
+G +G G D+ P +Q VV+VS G H +A+ V+ WG+G
Sbjct: 300 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Query: 353 GALGHGDEIDKTLPEPLSSL 372
G LG G+ +D+ P+ + +L
Sbjct: 358 GQLGIGESVDRNFPKIIEAL 377
Score = 199 (75.1 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 60/208 (28%), Positives = 94/208 (45%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G HT ++ + ++ G G LG G T + V R+ + V+ H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
V SG ++T G + GH D + P +EAL Q++ G T LT
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G ++ G N GQ+G G+ LD+ +P + + VVQ++ G + LAVT V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
G+N LG GE D P+ I+ G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 48/170 (28%), Positives = 78/170 (45%)
Query: 106 IVETSAGNMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
+ T M + G HT+ +S S ++++ G S G LGHG + ++ S +
Sbjct: 218 VTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNS 276
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 220
+ Q+S H + G+++ G N G + D P+ + R + K V Q
Sbjct: 277 FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---Q 332
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
V+ G T +T R +V G T+GQLG G+++DR PK I L G+
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGA 382
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 389 (142.0 bits), Expect = 7.2e-35, P = 7.2e-35
Identities = 101/324 (31%), Positives = 155/324 (47%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V ++ HAA V + G+VFT G+ S GH + + P+L+E+L V G
Sbjct: 274 VHHIACGVKHAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSIDFVACG 332
Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
T +T+ G ++T G TH G LGHG + PK I+ PLE + + ++ GP +
Sbjct: 333 EFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHT 391
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
+T G +++FG G+ LGHG++ PR +++ G+ + V+ G H A+
Sbjct: 392 ALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAIVEV 449
Query: 340 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
SSG ++TWG G LGHGD+ + P +S+L H +V T L
Sbjct: 450 IVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGL 509
Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
+G VY G +G LG P+ +D L + D L V +I+ G YH V+T R
Sbjct: 510 TTSGKVYTMGSTVYGQLGNPN---ADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNE 566
Query: 451 LFGFGDNERAQLGHDTLRGCLEPT 474
+F +G +LGH + PT
Sbjct: 567 VFTWGKGANGRLGHGDVEDRKAPT 590
Score = 283 (104.7 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 83/282 (29%), Positives = 130/282 (46%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
+ G +HT ++ +++ G G+LGHG + + + RI+ P + VS
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQIASVSCG 387
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 230
H A + +GQ+FT GD + GH D +F PR VE+L G+ V G+ +
Sbjct: 388 PWHTALITSTGQLFTFGDGTFGVLGHGD-KETVFYPREVESLSGLRTIAVACGVWHAAAI 446
Query: 231 LTI----------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
+ + G + T G +LGHGD R P ++ L + + ++A G S
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALID-HTFHRVACGHSL 505
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+ +T +G VY+ GS LG+ +L P ++ K V ++ G HV L S
Sbjct: 506 TVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLTKDC-VEEIACGAYHVAVLTS 563
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
V+TWGKG G LGHGD D+ P + +LK H+ C
Sbjct: 564 RNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIAC 605
Score = 246 (91.7 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 76/286 (26%), Positives = 127/286 (44%)
Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
G+ + + P+ +E+ + + G+ ++ +G V T G + G+LGHG D
Sbjct: 252 GYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKD 311
Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPR 313
P+ I L S+ +A G + AVT G +Y++G G++ LGHG P+
Sbjct: 312 VTGPQLIESLAAT-SIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPK 370
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
I +G+ + VS G H + S+G ++T+G G G LGHGD+ P + SL
Sbjct: 371 RISG-PLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLS 429
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL---GFPDR---GVSDKV--LRPRILD 425
+ V +V+ + + G L G D+ G DK L+P +
Sbjct: 430 GLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVS 489
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
+L H +++ G TV +T G+++ G QLG+ G L
Sbjct: 490 ALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKL 535
Score = 202 (76.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 69/247 (27%), Positives = 105/247 (42%)
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI--AAGPSYMLAVTGNGVVY 291
R HV + N + G G R + S+ GS A G Y+ V
Sbjct: 185 RSHVASDSPNMLVR-GTGSDAFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGEVLCENVT 243
Query: 292 SFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
FG+ N +G+ G + D L P+ +++ +H ++ G +H + G V+TWG+
Sbjct: 244 KFGADKN--IGYLGSRSDVLIPKPLESNVVLDVH--HIACGVKHAALVSRQGEVFTWGEA 299
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
G LGHG D T P+ + SL + V + T + TG +Y +G G + G
Sbjct: 300 SGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWG-DGTHNAGLL 358
Query: 411 DRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
G P RI L ++ +S G +HT ++T G+LF FGD LGH
Sbjct: 359 GHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET 418
Query: 470 CLEPTEI 476
P E+
Sbjct: 419 VFYPREV 425
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 377 (137.8 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 101/325 (31%), Positives = 152/325 (46%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ-VTA 223
V Q++ HAAFV + G++FT G+ S GH + +F PRLVE+L V
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341
Query: 224 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
G T +T+ G ++T G TH G LGHG + PK IA E V ++ GP +
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
+T G +++FG G+ LGHG++ PR +++ G+ + VS G H A+
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459
Query: 340 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
SSG ++TWG G LGHGD+ + P + +L + ++ T
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
L +G V+ G +G LG +D L + D L + V +IS G YH +T R
Sbjct: 520 LTTSGQVFTMGSTVYGQLGNLQ---TDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 576
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPT 474
++ +G +LGH L PT
Sbjct: 577 EVYTWGKGANGRLGHGDLEDRKVPT 601
Score = 270 (100.1 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 83/282 (29%), Positives = 128/282 (45%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+ G +HT ++ + +++ G G+LGHG + + + HV VS
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H A + G++FT GD + GH D + PR VE+L G+ V+ G+ T +
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457
Query: 233 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
G + T G +LGHGD R P + L + + +IA G S
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+ +T +G V++ GS LG+ + +L P ++ + V +S G HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
VYTWGKG G LGHGD D+ +P + +LK H+ C
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 616
Score = 270 (100.1 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 86/299 (28%), Positives = 135/299 (45%)
Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
T + P+ +E+ + Q+ G+ F+T +G + T G + G+LGHG D P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324
Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
+ + L SV +A G + AVT G +Y++G G++ LGHG P+ I
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 384
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
+G+HV VS G H + S G ++T+G G G LGHGD+ P + SL
Sbjct: 385 -SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 443
Query: 378 VQVCARKRKTFVLVD-------TGSVYG---FGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
+ V T +V+ + SV F W G G G D L+P + +L
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTW-GDGDKNRLGHGDKDPRLKPTCVPAL 502
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 483
++ +I+ G TV +T G++F G QLG+ G CL ++ + +EE
Sbjct: 503 IDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEE 561
Score = 149 (57.5 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 54/194 (27%), Positives = 91/194 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ----CV 152
L+++ S + T+A ++I + ++ +S+ +F+ G LGHG + + CV
Sbjct: 441 LRTIAVSCGVWHTAAV-VEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCV 499
Query: 153 -SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
+ NF H +++ + + SGQVFT G G+ T+ + P LVE
Sbjct: 500 PALIDYNF----H--KIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKL--PCLVE 551
Query: 212 -ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
L ++++ G LT R V+T G +G+LGHGD DR P + L++
Sbjct: 552 DKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKD-RH 610
Query: 271 VVQIAAGPSYMLAV 284
V IA G +Y A+
Sbjct: 611 VKYIACGSNYTAAI 624
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 372 (136.0 bits), Expect = 4.7e-33, P = 4.7e-33
Identities = 113/372 (30%), Positives = 177/372 (47%)
Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
+ S ++ GS+ G LG G E Q ++ ++I + V QV+ H F+ +G+
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
V+ CG N GH + P RP L+ L+ Q+ G + L+ G V + G N
Sbjct: 61 VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 244 THGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
GQLGH D PK + L +VVQIA G ++ LA+T G +YS+GS LG
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLV-TKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176
Query: 303 HGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
+D P + T GI + ++ G H + SG V+ WG+ CG LG D
Sbjct: 177 VNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLND 234
Query: 360 EIDKTLPEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
E +++ P L +L++ L V+ C + F L + G V+ G +G LG G S
Sbjct: 235 ETNRSYPTQLKTLRT-LGVRFVACGDEFSVF-LTNEGGVFTCGAGAYGQLG---HGFSSN 289
Query: 418 VLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
+ PR++ L ++Q++ G HT+ +V RGR++ FG QLG + + + P ++
Sbjct: 290 EMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP-QV 348
Query: 477 FIQEMEEDTGLA 488
I +G A
Sbjct: 349 VIGPWVSPSGSA 360
Score = 309 (113.8 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 92/301 (30%), Positives = 136/301 (45%)
Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ G HTL L + V++CGS+ LGH T + + + ++Q+
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ---DYVIIQICCGSR 100
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ + GQV + GDN GH + P++V L Q+ G N + LT
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G +++ GSN +GQLG D P + L + + IA G ++ ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219
Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
FG G N C LG ++ + P ++T R G+ V + GDE V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFV--ACGDEFSVFLTNEGGVFTCG 275
Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 407
G G LGHG ++ LP + L QV R T LV + G VY FG G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335
Query: 408 G 408
G
Sbjct: 336 G 336
Score = 239 (89.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 69/208 (33%), Positives = 107/208 (51%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
+QI G H+L L S ++S GS++ G LG + P + T C R+ + ++
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
NH+ + +SG VF G N+ G D TNR P ++ L+ + + V G F+
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
FLT G V TCG+ +GQLGHG + + P+ + +E +GS + Q+A G + LA V
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
G VY+FG GS+ LG + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 370 (135.3 bits), Expect = 7.5e-33, P = 7.5e-33
Identities = 102/317 (32%), Positives = 161/317 (50%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
+V +V+ NH+ F+L+ G+V+TCG N+ GH +P + AL G V
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS---KPEPIGALAGQHIVHVAC 91
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
G + + L+ +G V + G+ + GQLG D T P+ I L + +++QI+ G + L
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQ-TILQISCGNWHCL 150
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
A+ +G +++G S LG G++ + P+ +++ GI + +V+AG H AL S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
G V+ WGK G LG DE D+ P + L+S V + + T VL +G V+ FG
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 460
G LG ++D+V R+L+ L VSQI+ G +HT+ V G ++ FG R
Sbjct: 269 GSCGQLGHDS--MNDEVNPRRVLE-LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325
Query: 461 QLG--HDTLRGCLEPTE 475
QLG H C P +
Sbjct: 326 QLGTGHTCNVKCPSPVK 342
Score = 344 (126.2 bits), Expect = 9.5e-29, P = 9.5e-29
Identities = 93/261 (35%), Positives = 136/261 (52%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
K+V G N + FL G V+TCG NT GQLGH +P P I L G +V +A G
Sbjct: 37 KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPEP--IGAL--AGQHIVHVACG 92
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVV 336
S+ +A++ G V+S+G+GS+ LG D + PR I+ ++ I +++S G+ H +
Sbjct: 93 ESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTI--LQISCGNWHCL 150
Query: 337 ALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
AL + G +TWG+ G LG G E + P+ + SL QV A +F L +G+
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
V+G+G G LG D D+ P + LR+ V IS G HT V+T G +F FG
Sbjct: 211 VFGWGKNSSGQLGLSDE--RDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 456 DNERAQLGHDTLRGCLEPTEI 476
QLGHD++ + P +
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRV 288
Score = 339 (124.4 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 95/337 (28%), Positives = 156/337 (46%)
Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
H ++ E + G G + L+ + V++CG + G LGH E ++ + +
Sbjct: 32 HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPEPIGAL---A 82
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
H+V V+ E+H+ + GQVF+ G S G + PRL++ L Q+
Sbjct: 83 GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
+ G L G T G N++GQLG G + + +P+ + L+ + + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
A++ +G V+ +G S+ LG ++ D P ++ R + VV +S G+EH L
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGF 399
SG V+T+G G CG LGH D+ P + L Q+ + T V +G +Y F
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
G G LG G + V P + A H Q+S
Sbjct: 320 GCGTRGQLG---TGHTCNVKCPSPVKGHWAAHNGQLS 353
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 347 WGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMG 403
WG G G G + +PEP + +V C F+L D G VY G
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
G LG G +P + +L H+ ++ G H+V ++D+G++F +G QLG
Sbjct: 63 KGQLGHESEGS-----KPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLG 117
Query: 464 HDTLRGCLEPTEIFIQEMEEDT 485
T+ + + I+++ + T
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQT 138
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 360 (131.8 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 95/328 (28%), Positives = 158/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G + + G G+LGH ++ P+ I L+ + IA
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311
Score = 347 (127.2 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 96/306 (31%), Positives = 153/306 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V+ A+ +A +++ +VF G N G ++ I P E L + QV G
Sbjct: 2947 LVRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGG 3004
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYML 282
+T+ G V+ CG T+G+LG G + P P+ I L V V + +G + +
Sbjct: 3005 SKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAM 3064
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G ++S+G G + LGH + + +PR I+ + K I ++ G H A+ SSG
Sbjct: 3065 ALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3122
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSVYGFG 400
+YTWG G G LGHGD + P+ + L H +QV C +R +T L D G V+ +G
Sbjct: 3123 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3182
Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
FG LG RG S+ P+ ++ L V QI G ++ +T G ++ +G +
Sbjct: 3183 DGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3239
Query: 461 QLGHDT 466
+LGH T
Sbjct: 3240 RLGHGT 3245
Score = 343 (125.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 101/348 (29%), Positives = 166/348 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R + +
Sbjct: 2991 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNY 3049
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G++F+ G+ GH + +PRL+EALK + +
Sbjct: 3050 VVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3108
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + +T G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3109 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3166
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3224
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
SG V+TWGKG LGHG ++ P+ + L+ V V + DTG VY
Sbjct: 3225 TKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3284
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G G G G + +P ++ L +++++ G H+V T
Sbjct: 3285 WGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 338 (124.0 bits), Expect = 4.3e-27, P = 4.3e-27
Identities = 97/325 (29%), Positives = 157/325 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4007 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ + AG + +T G + T G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGK 4122
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGHGD+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 4182 LGRGGSDGCKVPMKIDSLTDLG--VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4239
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG--SVYGFGWMGFGSLGFPDRGVSDKV 418
P + L+ + + + G VY +G G LG D G ++ +
Sbjct: 4240 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLG--D-GTTNAI 4296
Query: 419 LRPRILDSLRAHHVSQISTGLYHTV 443
RPR++ +L+ +++++ G HT+
Sbjct: 4297 QRPRLVAALQGKKINRVACGSAHTL 4321
Score = 327 (120.2 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 95/312 (30%), Positives = 154/312 (49%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VVQ++ +E + ++G+V+T NS DT P+LV++L ++ A
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V + G G+LGHGDT+ PK I+ L ++ G VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG D+ P + KG+ V+ VS +GD +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ +G V++WG G G LG G P+ + L+ V+V + + L G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 458 ERAQLGH-DTLR 468
++ Q H DTLR
Sbjct: 738 DQCQ--HFDTLR 747
Score = 327 (120.2 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 97/350 (27%), Positives = 160/350 (45%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 3956 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 4015 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L + VV IAAG ++ +T G ++++G G LGHG+
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + + +GD + L V++WG G G LG G +
Sbjct: 4133 SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4192
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 4193 PMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 4249
Query: 426 SLRAHHVSQISTGLYHTVVVTDRG--RLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V T+ G ++ +GDN+ QLG T P
Sbjct: 4250 GLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRP 4299
Score = 294 (108.6 bits), Expect = 9.8e-33, Sum P(2) = 9.8e-33
Identities = 92/325 (28%), Positives = 152/325 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L Q+ + +SRN ++ N + + +QS+ S +IV+
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRV-YTQAYNSDTLGP-QLVQSLA-SRNIVKI 499
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVSFTRINFPSAAHV 165
+A + G ++ L +N VFS G G LGHG P E + +S + HV
Sbjct: 500 AAHS----DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALS-GKQAGKHV 554
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V ++ ++A + G+++T G + GH + P LV LKG+ V+ G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGS 613
Query: 226 NFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
L + G V + G +G+LG G + TPK I L+++ +V++ G + +A
Sbjct: 614 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIA 672
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+T +G VY++G G N LGHG + P+ ++ KG V+ V+AG H +AL
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSE 730
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEP 368
V++WG H D + T PEP
Sbjct: 731 VHSWGSN--DQCQHFDTLRITKPEP 753
Score = 289 (106.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 109/382 (28%), Positives = 169/382 (44%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4036 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4089
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV ++A H+A + +G +FT G GH D+ + +P+LVEAL+G
Sbjct: 4090 IESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGY 4148
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L ++G VV++
Sbjct: 4149 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG-VVKV 4207
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4265
Query: 335 VVAL--DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
V D G VYTWG G LG G P +++L+ +V T
Sbjct: 4266 CVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAW-S 4324
Query: 393 TGSVYGFGWMGFG-SLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD-RG 449
T G + + + + + LR R+L HH+S++ + + D G
Sbjct: 4325 TSKPANAGKLPTQVPMEYNHLQEIPIISLRNRLL---LLHHISEL---FCPCIPMFDLEG 4378
Query: 450 RLFGFGDNERAQLGHDTLRGCL 471
RL G +G DTLRG L
Sbjct: 4379 RLDETGQGP--SVGFDTLRGIL 4398
Score = 282 (104.3 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 74/247 (29%), Positives = 124/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V + A + + G ++ +G +G LG D
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ + V I+ G T+ +TD ++ +GD + +LG G
Sbjct: 4133 ---SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4190 CKVPMKI 4196
Score = 275 (101.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 87/285 (30%), Positives = 127/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ L + +FS G G LGH C I + ++ +H+A +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ +G VY WG G G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T V V T SV+
Sbjct: 3295 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVH 3339
Score = 206 (77.6 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 63/225 (28%), Positives = 105/225 (46%)
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
L +G VVQIA L ++ NG VY+ S D L P+ +Q+ + I
Sbjct: 449 LANLG-VVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIV 497
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQV 380
+ + H +AL ++G V++WG G G LGHGD + P+ +S+L A V +
Sbjct: 498 KIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHI 557
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL- 439
+ + G +Y +G +G LG G S+ P ++ L+ V +S G
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSG 614
Query: 440 -YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF-IQEME 482
T+ VT+ G+++ +GD + +LG GC P I +Q+++
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659
Score = 179 (68.1 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 54/196 (27%), Positives = 85/196 (43%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3949 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 4006
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
+ G +Y G G G LG G + P L S++ +V + L G VY
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G G LG +R D RPR+++SLR V I+ G H+ +T G LF +G
Sbjct: 4067 SWGEAEDGKLGHGNRSPCD---RPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123
Query: 458 ERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 4124 RYGRLGHGDSEDQLKP 4139
Score = 156 (60.0 bits), Expect = 9.8e-33, Sum P(2) = 9.8e-33
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4007 ADGKLYATGYGAGGRLGI---GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090
Score = 153 (58.9 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 55/181 (30%), Positives = 81/181 (44%)
Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
+++ S G+ G TL ++ N V+S G G LG G + C + I
Sbjct: 606 VIDVSCGS-----GDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLD 659
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V+V + + + GQV+T G + GH T + P+L+E LKG V AG
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAG 718
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYML 282
LT VH+ GSN Q H DTL +P P ++ L+ +V IA GP+
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQ--HFDTLRITKPEPAALPGLD-TKHIVGIACGPAQSF 775
Query: 283 A 283
A
Sbjct: 776 A 776
Score = 38 (18.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 391 VDTGSVYGFGW 401
+ GSV G+GW
Sbjct: 3697 ISDGSVNGWGW 3707
Score = 38 (18.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
+ W + YC A +DK P P
Sbjct: 3876 WAWFRRYCMASRVAVALDKRTPLP 3899
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 360 (131.8 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 95/328 (28%), Positives = 158/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G + + G G+LGH ++ P+ I L+ + IA
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311
Score = 347 (127.2 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 96/306 (31%), Positives = 153/306 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V+ A+ +A +++ +VF G N G ++ I P E L + QV G
Sbjct: 2947 LVRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGG 3004
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYML 282
+T+ G V+ CG T+G+LG G + P P+ I L V V + +G + +
Sbjct: 3005 SKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAM 3064
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G ++S+G G + LGH + + +PR I+ + K I ++ G H A+ SSG
Sbjct: 3065 ALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSG 3122
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSVYGFG 400
+YTWG G G LGHGD + P+ + L H +QV C +R +T L D G V+ +G
Sbjct: 3123 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3182
Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
FG LG RG S+ P+ ++ L V QI G ++ +T G ++ +G +
Sbjct: 3183 DGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3239
Query: 461 QLGHDT 466
+LGH T
Sbjct: 3240 RLGHGT 3245
Score = 343 (125.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 101/348 (29%), Positives = 166/348 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R + +
Sbjct: 2991 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNY 3049
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G++F+ G+ GH + +PRL+EALK + +
Sbjct: 3050 VVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3108
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + +T G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3109 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3166
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3224
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
SG V+TWGKG LGHG ++ P+ + L+ V V + DTG VY
Sbjct: 3225 TKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3284
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G G G G + +P ++ L +++++ G H+V T
Sbjct: 3285 WGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 338 (124.0 bits), Expect = 4.3e-27, P = 4.3e-27
Identities = 97/325 (29%), Positives = 157/325 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4007 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ + AG + +T G + T G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGK 4122
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGHGD+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 4182 LGRGGSDGCKVPMKIDSLTDLG--VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4239
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG--SVYGFGWMGFGSLGFPDRGVSDKV 418
P + L+ + + + G VY +G G LG D G ++ +
Sbjct: 4240 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLG--D-GTTNAI 4296
Query: 419 LRPRILDSLRAHHVSQISTGLYHTV 443
RPR++ +L+ +++++ G HT+
Sbjct: 4297 QRPRLVAALQGKKINRVACGSAHTL 4321
Score = 327 (120.2 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 95/312 (30%), Positives = 154/312 (49%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VVQ++ +E + ++G+V+T NS DT P+LV++L ++ A
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V + G G+LGHGDT+ PK I+ L ++ G VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG D+ P + KG+ V+ VS +GD +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ +G V++WG G G LG G P+ + L+ V+V + + L G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 458 ERAQLGH-DTLR 468
++ Q H DTLR
Sbjct: 738 DQCQ--HFDTLR 747
Score = 327 (120.2 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 97/350 (27%), Positives = 160/350 (45%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 3956 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 4015 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L + VV IAAG ++ +T G ++++G G LGHG+
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + + +GD + L V++WG G G LG G +
Sbjct: 4133 SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4192
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 4193 PMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 4249
Query: 426 SLRAHHVSQISTGLYHTVVVTDRG--RLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V T+ G ++ +GDN+ QLG T P
Sbjct: 4250 GLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRP 4299
Score = 294 (108.6 bits), Expect = 9.8e-33, Sum P(2) = 9.8e-33
Identities = 92/325 (28%), Positives = 152/325 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L Q+ + +SRN ++ N + + +QS+ S +IV+
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRV-YTQAYNSDTLGP-QLVQSLA-SRNIVKI 499
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVSFTRINFPSAAHV 165
+A + G ++ L +N VFS G G LGHG P E + +S + HV
Sbjct: 500 AAHS----DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALS-GKQAGKHV 554
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V ++ ++A + G+++T G + GH + P LV LKG+ V+ G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGS 613
Query: 226 NFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
L + G V + G +G+LG G + TPK I L+++ +V++ G + +A
Sbjct: 614 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIA 672
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+T +G VY++G G N LGHG + P+ ++ KG V+ V+AG H +AL
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSE 730
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEP 368
V++WG H D + T PEP
Sbjct: 731 VHSWGSN--DQCQHFDTLRITKPEP 753
Score = 289 (106.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 109/382 (28%), Positives = 169/382 (44%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4036 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4089
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV ++A H+A + +G +FT G GH D+ + +P+LVEAL+G
Sbjct: 4090 IESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGY 4148
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L ++G VV++
Sbjct: 4149 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG-VVKV 4207
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4265
Query: 335 VVAL--DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
V D G VYTWG G LG G P +++L+ +V T
Sbjct: 4266 CVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAW-S 4324
Query: 393 TGSVYGFGWMGFG-SLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD-RG 449
T G + + + + + LR R+L HH+S++ + + D G
Sbjct: 4325 TSKPANAGKLPTQVPMEYNHLQEIPIISLRNRLL---LLHHISEL---FCPCIPMFDLEG 4378
Query: 450 RLFGFGDNERAQLGHDTLRGCL 471
RL G +G DTLRG L
Sbjct: 4379 RLDETGQGP--SVGFDTLRGIL 4398
Score = 282 (104.3 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 74/247 (29%), Positives = 124/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V + A + + G ++ +G +G LG D
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ + V I+ G T+ +TD ++ +GD + +LG G
Sbjct: 4133 ---SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4190 CKVPMKI 4196
Score = 275 (101.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 87/285 (30%), Positives = 127/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ L + +FS G G LGH C I + ++ +H+A +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ +G VY WG G G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T V V T SV+
Sbjct: 3295 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVH 3339
Score = 206 (77.6 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 63/225 (28%), Positives = 105/225 (46%)
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
L +G VVQIA L ++ NG VY+ S D L P+ +Q+ + I
Sbjct: 449 LANLG-VVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIV 497
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQV 380
+ + H +AL ++G V++WG G G LGHGD + P+ +S+L A V +
Sbjct: 498 KIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHI 557
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL- 439
+ + G +Y +G +G LG G S+ P ++ L+ V +S G
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSG 614
Query: 440 -YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF-IQEME 482
T+ VT+ G+++ +GD + +LG GC P I +Q+++
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659
Score = 179 (68.1 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 54/196 (27%), Positives = 85/196 (43%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3949 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 4006
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
+ G +Y G G G LG G + P L S++ +V + L G VY
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G G LG +R D RPR+++SLR V I+ G H+ +T G LF +G
Sbjct: 4067 SWGEAEDGKLGHGNRSPCD---RPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123
Query: 458 ERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 4124 RYGRLGHGDSEDQLKP 4139
Score = 156 (60.0 bits), Expect = 9.8e-33, Sum P(2) = 9.8e-33
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4007 ADGKLYATGYGAGGRLGI---GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090
Score = 153 (58.9 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 55/181 (30%), Positives = 81/181 (44%)
Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
+++ S G+ G TL ++ N V+S G G LG G + C + I
Sbjct: 606 VIDVSCGS-----GDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLD 659
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V+V + + + GQV+T G + GH T + P+L+E LKG V AG
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAG 718
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYML 282
LT VH+ GSN Q H DTL +P P ++ L+ +V IA GP+
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQ--HFDTLRITKPEPAALPGLD-TKHIVGIACGPAQSF 775
Query: 283 A 283
A
Sbjct: 776 A 776
Score = 38 (18.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 391 VDTGSVYGFGW 401
+ GSV G+GW
Sbjct: 3697 ISDGSVNGWGW 3707
Score = 38 (18.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
+ W + YC A +DK P P
Sbjct: 3876 WAWFRRYCMASRVAVALDKRTPLP 3899
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 367 (134.2 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 102/317 (32%), Positives = 160/317 (50%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
+V +V+ NH+ F+L+ G+V+TCG N+ GH +P V L G V
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS---KPAWVGTLAGQHIVHVAC 91
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
G + + L+ +G V + G+ + GQLG D T P+ I L + +++QI+ G + L
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQ-TILQISCGNWHCL 150
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
A+ +G +++G S LG G++ + P+ +++ GI + +V+AG H AL S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
G V+ WGK G LG DE D+ P + L+S V + + T VL +G V+ FG
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 460
G LG ++D+V R+L+ L VSQI+ G +HT+ V G ++ FG R
Sbjct: 269 GSCGQLGHDS--MNDEVNPRRVLE-LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325
Query: 461 QLG--HDTLRGCLEPTE 475
QLG H C P +
Sbjct: 326 QLGTGHTCNVKCPSPVK 342
Score = 338 (124.0 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 95/337 (28%), Positives = 156/337 (46%)
Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
H ++ E + G G + L+ + V++CG + G LGH E ++ + +
Sbjct: 32 HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPAWVGTL---A 82
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
H+V V+ E+H+ + GQVF+ G S G + PRL++ L Q+
Sbjct: 83 GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
+ G L G T G N++GQLG G + + +P+ + L+ + + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
A++ +G V+ +G S+ LG ++ D P ++ R + VV +S G+EH L
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGF 399
SG V+T+G G CG LGH D+ P + L Q+ + T V +G +Y F
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
G G LG G + V P + A H Q+S
Sbjct: 320 GCGTRGQLG---TGHTCNVKCPSPVKGHWAAHNGQLS 353
Score = 334 (122.6 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 91/261 (34%), Positives = 135/261 (51%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
K+V G N + FL G V+TCG NT GQLGH +P + L G +V +A G
Sbjct: 37 KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPA--WVGTL--AGQHIVHVACG 92
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVV 336
S+ +A++ G V+S+G+GS+ LG D + PR I+ ++ I +++S G+ H +
Sbjct: 93 ESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTI--LQISCGNWHCL 150
Query: 337 ALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
AL + G +TWG+ G LG G E + P+ + SL QV A +F L +G+
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
V+G+G G LG D D+ P + LR+ V IS G HT V+T G +F FG
Sbjct: 211 VFGWGKNSSGQLGLSDE--RDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFG 267
Query: 456 DNERAQLGHDTLRGCLEPTEI 476
QLGHD++ + P +
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRV 288
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 347 WGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMG 403
WG G G G + +PEP + +V C F+L D G VY G
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
G LG G +P + +L H+ ++ G H+V ++D+G++F +G QLG
Sbjct: 63 KGQLGHESEGS-----KPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLG 117
Query: 464 HDTLRGCLEPTEIFIQEMEEDT 485
T+ + + I+++ + T
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQT 138
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 364 (133.2 bits), Expect = 4.2e-32, Sum P(2) = 4.2e-32
Identities = 98/328 (29%), Positives = 158/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 2986 SALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPI--PRQISALSNYVV 3043
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3044 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3102
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +YS+G G LGHG+ +L+P+ ++ G VV+V+ G D
Sbjct: 3103 GSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVVQVACGSRDAQ 3160
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3161 TLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3220
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VT+ G++F +
Sbjct: 3221 VVWTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAW 3277
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3278 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3303
Score = 354 (129.7 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 96/323 (29%), Positives = 160/323 (49%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4000 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4056
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
++++ G+ GH + + P RPR++E+L+GV + AG + +T G ++T G
Sbjct: 4057 ELYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGK 4115
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGHGD+ D+ PK + L+ V+ +A +G + L +T + +V+S+G G
Sbjct: 4116 GRYGRLGHGDSEDQLKPKLVEALQG-HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 4174
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G+ VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 4175 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4232
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
P + L+ + + + G VY +G G LG D G ++ + R
Sbjct: 4233 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG--D-GTTNAIQR 4289
Query: 421 PRILDSLRAHHVSQISTGLYHTV 443
PR++ +L+ +++++ G HT+
Sbjct: 4290 PRLVAALQGKKINRVACGSAHTL 4312
Score = 344 (126.2 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 98/348 (28%), Positives = 161/348 (46%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 3949 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 4007
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V ++V +G L+ G +++ G
Sbjct: 4008 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED 4066
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L V VV IAAG ++ +T +G +Y++G G LGHG+
Sbjct: 4067 GKLGHGNRSPCDRPRVIESLRGV-EVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGD 4125
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + V +GD + L V++WG G G LG G +
Sbjct: 4126 SEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKV 4185
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 4186 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 4242
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V T+ G ++ +GDN+ QLG T P
Sbjct: 4243 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4290
Score = 339 (124.4 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 94/288 (32%), Positives = 143/288 (49%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T G V+ CG
Sbjct: 2956 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 3014
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I+ L V V + +G + +A+T +G V+S+G G +
Sbjct: 3015 ATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3074
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LGH + + +PR I+ + K I ++ G H A+ SSG +Y+WG G G LGHGD
Sbjct: 3075 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3132
Query: 361 IDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
+ P+ + L H VQV C +R +T L D G V+ +G FG LG RG S+
Sbjct: 3133 TTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLG---RGGSEGC 3189
Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
P+ ++ L V QI G ++ +T G ++ +G + +LGH T
Sbjct: 3190 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3237
Score = 332 (121.9 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 89/270 (32%), Positives = 137/270 (50%)
Query: 207 PRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKS 261
P LV AL ++ A G ++ L++ G V + G G+LGHGDT L+ PT S
Sbjct: 474 PMLVHALTSRKIMKLAAHPDGQHYLA-LSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMIS 532
Query: 262 IAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
+ VG VV IA G +Y A+T +G ++++G G+ LGHG D+ P +
Sbjct: 533 VFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTAL-- 590
Query: 321 KGIHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
KG+ V+ V+ +GD +A+ +G V++WG G G LG G P+ + L+ V
Sbjct: 591 KGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIV 650
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
+VC + + L G VY +G LG G + V P++LDSL+ V I+ G
Sbjct: 651 KVCCGSQFSVALTKDGQVYTWGKGDNQRLG---HGTDEHVRYPKLLDSLQGKRVVDIAVG 707
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGH-DTL 467
H + +T+ G + +G N++ Q H DTL
Sbjct: 708 STHCLALTEEGEVHSWGSNDKLQ--HFDTL 735
Score = 331 (121.6 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 100/347 (28%), Positives = 164/347 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G + +I+ S
Sbjct: 2983 ETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYV 3042
Query: 165 V--VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
V V V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 3043 VKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIA 3101
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--S 279
G + + +T G +++ G +G+LGHGD + PK + L +G VVQ+A G +
Sbjct: 3102 CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVL--LGHRVVQVACGSRDA 3159
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3160 QTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLALT 3217
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
SG V+TWGKG LGHG ++ P+ + L+ V V + +TG V+ +
Sbjct: 3218 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAW 3277
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
G G G G + +P ++ L +++++ G H+V T
Sbjct: 3278 GDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3321
Score = 292 (107.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 105/365 (28%), Positives = 162/365 (44%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ +G H L +S+ ++S G + G LGHG + C I VV ++A H
Sbjct: 4042 VNSGGKHCLALSSEGELYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAGGAH 4100
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLT 232
+A + SG+++T G GH D+ + +P+LVEAL+G V G T LT
Sbjct: 4101 SACITASGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGHRVIDVACGSGDAQTLCLT 4159
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
V + G +G+LG G + P I L +G VV++ G + +A+T +G VY+
Sbjct: 4160 DDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYT 4218
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
+G G LGHG +PR +Q + K V+ ++ G H V G VYTWG
Sbjct: 4219 WGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLHCVCCTEDGEVYTWGDNDE 4276
Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL-----VDTGSVYGFGWMGFGSL 407
G LG G P +++L+ +V T + G + M + L
Sbjct: 4277 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQVPMEYNHL 4336
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD-RGRLFGFGDNERAQLGHDT 466
+ ++ LR R+L HH+S++ + + D GRL G +G DT
Sbjct: 4337 ----QEIAIIGLRNRLL---LLHHISEL---FCPCIPMFDLEGRLGETGHG--VSVGFDT 4384
Query: 467 LRGCL 471
LRG L
Sbjct: 4385 LRGIL 4389
Score = 290 (107.1 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 74/247 (29%), Positives = 125/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3950 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 4005
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G +Y+WG+
Sbjct: 4006 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAE 4065
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V + A + + +G +Y +G +G LG D
Sbjct: 4066 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGD 4125
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V ++ G T+ +TD ++ +GD + +LG G
Sbjct: 4126 ---SEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 4182
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4183 CKVPMKI 4189
Score = 286 (105.7 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 82/272 (30%), Positives = 128/272 (47%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF----PSAAHVVQVSASENH 174
G+++ L N VFS G G LGHG +TT T I+ P VV ++ +
Sbjct: 494 GQHYLALSVNGEVFSWGCGDGGRLGHG-DTTYLEEPTMISVFSGRPVGKQVVHIACGSTY 552
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 233
+A + G++ T G + GH + P LV ALKG+ V G L +
Sbjct: 553 SAAITADGELHTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVIDVACGSGDAQTLAVT 611
Query: 234 -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V + G +G+LG G + TPK + L+++ +V++ G + +A+T +G VY+
Sbjct: 612 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYT 670
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
+G G N LGHG P+ + + + K VV ++ G H +AL G V++WG
Sbjct: 671 WGKGDNQRLGHGTDEHVRYPKLLDSLQGK--RVVDIAVGSTHCLALTEEGEVHSWGSN-- 726
Query: 353 GALGHGDEI--DKTLPEPLSSLKS-HLAVQVC 381
L H D + +K P+ L L S H+ C
Sbjct: 727 DKLQHFDTLFSNKKQPKALPGLNSKHIVGISC 758
Score = 283 (104.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 77/251 (30%), Positives = 118/251 (47%)
Query: 232 TIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
TIR V G N QLG G + P+ ++++ L +VVQ+A G + AVT G
Sbjct: 2952 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVAGGSKSLFAVTAEG 3007
Query: 289 VVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
VY+ G +N LG G + PR I + V V +G H +AL G V++W
Sbjct: 3008 KVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSW 3067
Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
G+G G LGH ++ P + +LK+ + + + +G +Y +G +G L
Sbjct: 3068 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRL 3127
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHD 465
G D LRP+++ L H V Q++ G T+ +TD G +F +GD + +LG
Sbjct: 3128 GHGDNTTQ---LRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG 3184
Query: 466 TLRGCLEPTEI 476
GC P I
Sbjct: 3185 GSEGCNIPQNI 3195
Score = 275 (101.9 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 88/285 (30%), Positives = 127/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3052 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3110
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG++++ G GH D N RP+LV+ L G QV G T LT G
Sbjct: 3111 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGM 3169
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3170 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3228
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ +G V+ WG G G
Sbjct: 3229 DYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCLAVTETGQVFAWGDNDHGQQG 3286
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T V V T SV+
Sbjct: 3287 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPSVH 3331
Score = 185 (70.2 bits), Expect = 7.4e-20, Sum P(3) = 7.4e-20
Identities = 63/215 (29%), Positives = 98/215 (45%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--V 178
Y + ++ + + G G LGHG Q + V+ V+ A V
Sbjct: 552 YSAAITADGELHTWGRGNYGRLGHGSSEDQTTPML-VTALKGLKVIDVACGSGDAQTLAV 610
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++GQV++ GD G R + P+LVE L+ + +V G F+ LT G V+
Sbjct: 611 TENGQVWSWGDGDYGKLG-RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVY 669
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
T G + +LGHG PK + L+ VV IA G ++ LA+T G V+S+GS
Sbjct: 670 TWGKGDNQRLGHGTDEHVRYPKLLDSLQGK-RVVDIAVGSTHCLALTEEGEVHSWGSNDK 728
Query: 299 FCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAG 331
L H + ++ QP+A+ K H+V +S G
Sbjct: 729 --LQHFDTLFSNKKQPKALPGLNSK--HIVGISCG 759
Score = 179 (68.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 66/260 (25%), Positives = 113/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ VE +V+ +AG G + + ++ +++ G G LG
Sbjct: 4073 NRSPCDRPRVIESLRGVE----VVDIAAG------GAHSACITASGELYTWGKGRYGRLG 4122
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL--QSGQVFTCGDNSSFCCGHRDTN 201
HG Q + + V+ V+ A + V++ GD G R +
Sbjct: 4123 HGDSEDQ-LKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG-RGGS 4180
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4181 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4240
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 4241 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4299
Query: 322 GIHVVRVSAGDEHVVALDSS 341
I+ RV+ G H +A +S
Sbjct: 4300 KIN--RVACGSAHTLAWSTS 4317
Score = 175 (66.7 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 53/197 (26%), Positives = 88/197 (44%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3942 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALAT--LRPVQLIGGEQTLFAVT 3999
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK---RKTFVLVDTGSV 396
+ G +Y G G G LG G + P L S++ H+ ++ A + L G +
Sbjct: 4000 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQ-HVFIRKVAVNSGGKHCLALSSEGEL 4058
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
Y +G G LG +R D RPR+++SLR V I+ G H+ +T G L+ +G
Sbjct: 4059 YSWGEAEDGKLGHGNRSPCD---RPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGK 4115
Query: 457 NERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 4116 GRYGRLGHGDSEDQLKP 4132
Score = 161 (61.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 57/222 (25%), Positives = 92/222 (41%)
Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
P L +G V QI L +T G VY+ N+ + L P +
Sbjct: 432 PIQCKALSNLG-VTQIVCSEKGFLILTITGAVYT----QNY------KSTTLAPMLVHAL 480
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH-LA 377
+ I + +H +AL +G V++WG G G LGHGD P +S +
Sbjct: 481 TSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVG 540
Query: 378 VQV----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
QV C + D G ++ +G +G LG G S+ P ++ +L+ V
Sbjct: 541 KQVVHIACGSTYSAAITAD-GELHTWGRGNYGRLG---HGSSEDQTTPMLVTALKGLKVI 596
Query: 434 QISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
++ G T+ VT+ G+++ +GD + +LG GC P
Sbjct: 597 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 638
Score = 158 (60.7 bits), Expect = 7.4e-20, Sum P(3) = 7.4e-20
Identities = 38/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3940 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3999
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4000 ADGKLYATGYGAGGRLGI---GGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4056
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
L+ +G+ E +LGH C P I
Sbjct: 4057 ELYSWGEAEDGKLGHGNRSPCDRPRVI 4083
Score = 43 (20.2 bits), Expect = 4.2e-32, Sum P(2) = 4.2e-32
Identities = 19/78 (24%), Positives = 31/78 (39%)
Query: 7 LFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCA 66
L ++ LP +F+ G +S V L +E +K HG K S + L L
Sbjct: 224 LDALRALPEATLFD---EGTVSPVWLEVVERATKFLSDIHGSASGKAPSNIPLQDQHLAL 280
Query: 67 LHSIYAGMSRNVQIELLN 84
+ + R +LL+
Sbjct: 281 AILLELAVQRGTLSQLLS 298
Score = 41 (19.5 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
GD + R P P + GSV + G + G V+ F S++
Sbjct: 2638 GDKV-RVKPSVTTPKYKWGSVTHRSVGVVKAFSANGKDVIVDFPQQSHW 2685
Score = 38 (18.4 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
+ W + YC A +DK P P
Sbjct: 3869 WAWFRRYCTASRVSVALDKRSPLP 3892
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 361 (132.1 bits), Expect = 5.2e-32, P = 5.2e-32
Identities = 98/287 (34%), Positives = 147/287 (51%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ P++ + K+V G N + FL G V+TCG NT GQLGH ++P + I
Sbjct: 22 VAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP--EQIG 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
L + ++ +A G S+ LA++ G ++S+G+GS+ LG D + PR IQ ++
Sbjct: 80 ALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 138
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVC 381
I ++VS G+ H +AL + G +TWGK G LG G E +T P+ + SL+ QV
Sbjct: 139 I--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVA 196
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
A +F L +G+V+G+G G LG D D+ P + LR V IS G H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMNNAGQLGLSDE--KDRE-SPCHVKLLRTQKVVYISCGEEH 253
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
T V+T G +F FG QLGHD++ + P + E T +A
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIA 300
Score = 360 (131.8 bits), Expect = 6.6e-32, P = 6.6e-32
Identities = 100/323 (30%), Positives = 165/323 (51%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
F S + +V+ NH+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
V G + + L+ RG + + G+ + GQLG T D P+ I L + +++Q++
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA+ +G +++G S+ LG G++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
AL SG V+ WG G LG DE D+ P + L++ V + + T VL +G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 454
V+ FG G LG V+D+V R+L+ L V+QI+ G HT+ +V G ++ F
Sbjct: 263 VFTFGAGSCGQLGHDS--VNDEVNPRRVLE-LMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Query: 455 GDNERAQLG--HDTLRGCLEPTE 475
G + QLG H C P +
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK 342
Score = 349 (127.9 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 96/320 (30%), Positives = 150/320 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L+ + V++CG + G LGH E + +I + H++ V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
GQ+F+ G S G T + PRL++ L QV+ G L G
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
T G N+HGQLG G T P+ + LE + + Q+AAG ++ A++ +G V+ +G +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
LG ++ D P ++ R + VV +S G+EH L SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 416
D+ P + L Q+ ++ T LV +G +Y FG G LG G +
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333
Query: 417 KVLRPRILDSLRAHHVSQIS 436
V P + A H Q+S
Sbjct: 334 NVKCPSPVKGHWAAHSGQLS 353
Score = 297 (109.6 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 91/276 (32%), Positives = 132/276 (47%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG T V+ R I + ++QVS
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
+FG+GS LGH +DE+ PR + G V +++ G +H +AL SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV---QVCAR 383
G LG G + P P+ K H A Q+ AR
Sbjct: 323 AKGQLGTGHTCNVKCPSPV---KGHWAAHSGQLSAR 355
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 358 (131.1 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 102/337 (30%), Positives = 165/337 (48%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4084
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 4143
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ LAV+ +G +
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 4202
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V++FG G LG G + P+ + GI + +V+ G + VAL G+VYT+G+
Sbjct: 4203 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLC--GIGIKKVACGTQFSVALTKDGHVYTFGQ 4260
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
L G + P+ + L + V T L TG VY +G G LG
Sbjct: 4261 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4320
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
G ++ V P ++ L+ +V QIS G H+ T
Sbjct: 4321 ---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354
Score = 355 (130.0 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 101/339 (29%), Positives = 165/339 (48%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+SFG G N LGHG+ + +P+ I+ + G+ + +V AG + +AL S+G VY WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQ--GMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 350 GYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G C LG G E P+ + L + V + L VY +G G G
Sbjct: 641 GAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Query: 409 FPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G S + +P+ + L + QIS G H++ T
Sbjct: 699 ---QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 327 (120.2 bits), Expect = 9.6e-26, P = 9.6e-26
Identities = 112/385 (29%), Positives = 182/385 (47%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
+SD T A I TG T ++S + V+ GS+ L G T + + ++ PS
Sbjct: 347 ASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG--TQEKILQPKLA-PS 401
Query: 162 AAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCK 219
+ + A + + FV+ + G V CG S G D+N +L E + + K
Sbjct: 402 FSDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--K 458
Query: 220 QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-I 274
+V++ G T G V + G +G+LGHG++ + PK I PL+ G VV +
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCV 516
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
+AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSH 572
Query: 335 VVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
+AL G V+++G G G LGHGD P+ + +L+ +VCA + + L T
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
G VY +G G LG G S+ LRP++++ L A + IS G H + ++ ++
Sbjct: 633 GQVYAWG-CG-ACLGC---GSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVY 687
Query: 453 GFGDNERAQLGHDTLRGCL-EPTEI 476
+G+N Q G G + +P ++
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKV 712
Score = 287 (106.1 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 87/324 (26%), Positives = 150/324 (46%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4019 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLTVISALQGFVV 4076
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4077 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMS 4135
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4136 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4193
Query: 336 VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+A+ + G V+ +G G G LG G+ K+ P+ + L +V + + L G
Sbjct: 4194 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4253
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
VY FG +G P+ G + RP+ + L + ++ G HT+ + G ++ +
Sbjct: 4254 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4310
Query: 455 GDNERAQLGHDTLRGCLEPTEIFI 478
G N QLG EPT + +
Sbjct: 4311 GSNSEGQLGLGHTNHVREPTLVTV 4334
Score = 240 (89.5 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 71/231 (30%), Positives = 108/231 (46%)
Query: 237 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V+ G+ HGQL G + P + AP Q+ G + + NG V + G
Sbjct: 3994 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4048
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
GS LG G D I + + + S G D H +AL SG V++WG G G
Sbjct: 4049 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4108
Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LGHG+ + P + +L+ VQ+ C K V D G ++ FG +G LG +
Sbjct: 4109 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD-GKLFTFGNGDYGRLGLGN-- 4165
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
S+K L R+ +L + + Q++ GL HT+ V+ D ++ FGD + +LG
Sbjct: 4166 TSNKKLPERVT-ALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215
Score = 161 (61.7 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L ++ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDISIGDSHCLALS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 734
Score = 131 (51.2 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
VY WG G G L E + + P ++ A QV + TFV+ G+V G
Sbjct: 3994 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4050
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
+G LG +G SD + ++ +L+ V+Q+ T H++ +T+ G +F +GD +
Sbjct: 4051 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4107
Query: 461 QLGHDTLRGCLEPTEIFIQEMEE 483
+LGH P +I + EE
Sbjct: 4108 KLGHGNSDRQRRPRQIEALQGEE 4130
Score = 126 (49.4 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 106 IVETSAGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
++E G ++ G +L L S V++ G C LG G + I +A
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAA 664
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V +S ++H + +V+ G+NS CG ++ PI +P+ V L G+ +Q++
Sbjct: 665 TRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQIS 724
Query: 223 AG 224
AG
Sbjct: 725 AG 726
Score = 53 (23.7 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQLCALH 68
++ LP + ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL L
Sbjct: 1796 LQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQLKNLL 1853
Query: 69 SIYAGM 74
S AG+
Sbjct: 1854 S-QAGV 1858
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 257 PTPKSIA-PLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
P P +IA PL E+G S+ QIA G + + + + H DE +P++
Sbjct: 2743 PPPPAIAVPLLEMGFSLRQIAKAME-ATGARGEADAQNITVLAMWMIEHPGHEDEEEPQS 2801
Query: 315 IQT 317
T
Sbjct: 2802 GST 2804
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 358 (131.1 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 102/337 (30%), Positives = 165/337 (48%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ LAV+ +G +
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 4205
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V++FG G LG G + P+ + GI + +V+ G + VAL G+VYT+G+
Sbjct: 4206 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLC--GIGIKKVACGTQFSVALTKDGHVYTFGQ 4263
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
L G + P+ + L + V T L TG VY +G G LG
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
G ++ V P ++ L+ +V QIS G H+ T
Sbjct: 4324 ---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4357
Score = 355 (130.0 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 101/339 (29%), Positives = 165/339 (48%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+SFG G N LGHG+ + +P+ I+ + G+ + +V AG + +AL S+G VY WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQ--GMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 350 GYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G C LG G E P+ + L + V + L VY +G G G
Sbjct: 641 GAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Query: 409 FPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G S + +P+ + L + QIS G H++ T
Sbjct: 699 ---QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 322 (118.4 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 110/384 (28%), Positives = 179/384 (46%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+SD T A I TG ++ V+ GS+ L G T + + ++ PS
Sbjct: 347 ASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG--TQEKILQPKLA-PSF 402
Query: 163 AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQ 220
+ + A + + FV+ + G V CG S G D+N +L E + + K+
Sbjct: 403 SDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--KK 459
Query: 221 VTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IA 275
V++ G T G V + G +G+LGHG++ + PK I PL+ G VV ++
Sbjct: 460 VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCVS 517
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHT 573
Query: 336 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V+++G G G LGHGD P+ + +L+ +VCA + + L TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
VY +G G LG G S+ LRP++++ L A + IS G H + ++ ++
Sbjct: 634 QVYAWG-CG-ACLGC---GSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYA 688
Query: 454 FGDNERAQLGHDTLRGCL-EPTEI 476
+G+N Q G G + +P ++
Sbjct: 689 WGNNSMGQCGQGNSTGPITKPKKV 712
Score = 287 (106.1 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 87/324 (26%), Positives = 150/324 (46%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLTVISALQGFVV 4079
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMS 4138
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196
Query: 336 VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+A+ + G V+ +G G G LG G+ K+ P+ + L +V + + L G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
VY FG +G P+ G + RP+ + L + ++ G HT+ + G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313
Query: 455 GDNERAQLGHDTLRGCLEPTEIFI 478
G N QLG EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337
Score = 240 (89.5 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 71/231 (30%), Positives = 108/231 (46%)
Query: 237 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V+ G+ HGQL G + P + AP Q+ G + + NG V + G
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
GS LG G D I + + + S G D H +AL SG V++WG G G
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111
Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LGHG+ + P + +L+ VQ+ C K V D G ++ FG +G LG +
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD-GKLFTFGNGDYGRLGLGN-- 4168
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
S+K L R+ +L + + Q++ GL HT+ V+ D ++ FGD + +LG
Sbjct: 4169 TSNKKLPERVT-ALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 161 (61.7 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L ++ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDISIGDSHCLALS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 734
Score = 131 (51.2 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
VY WG G G L E + + P ++ A QV + TFV+ G+V G
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
+G LG +G SD + ++ +L+ V+Q+ T H++ +T+ G +F +GD +
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110
Query: 461 QLGHDTLRGCLEPTEIFIQEMEE 483
+LGH P +I + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133
Score = 126 (49.4 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 106 IVETSAGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
++E G ++ G +L L S V++ G C LG G + I +A
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAA 664
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V +S ++H + +V+ G+NS CG ++ PI +P+ V L G+ +Q++
Sbjct: 665 TRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQIS 724
Query: 223 AG 224
AG
Sbjct: 725 AG 726
Score = 53 (23.7 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQLCALH 68
++ LP + ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL L
Sbjct: 1796 LQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQLKNLL 1853
Query: 69 SIYAGM 74
S AG+
Sbjct: 1854 S-QAGV 1858
Score = 44 (20.5 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 22/73 (30%), Positives = 32/73 (43%)
Query: 257 PTPKSIA-PLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
P P +IA PL E+G S+ QIA G + + + + H DE +P++
Sbjct: 2746 PPPPAIAVPLLEMGFSLRQIAKAME-ATGARGEADAQNITVLAMWMIEHPGHEDEEEPQS 2804
Query: 315 IQTF-RRKGIHVV 326
T R G VV
Sbjct: 2805 GSTADSRHGAAVV 2817
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 358 (131.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 96/328 (29%), Positives = 158/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307
Score = 351 (128.6 bits), Expect = 7.4e-29, P = 7.4e-29
Identities = 99/323 (30%), Positives = 158/323 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4002 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ VV IA +G + L +T + V+S+G G
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G+ VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 4177 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4234
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
P + L+ + + + G VY +G G LG D G ++ + R
Sbjct: 4235 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG--D-GTTNAIQR 4291
Query: 421 PRILDSLRAHHVSQISTGLYHTV 443
PR++ +L+ V++++ G HT+
Sbjct: 4292 PRLVAALQGKKVNRVACGSAHTL 4314
Score = 347 (127.2 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 102/348 (29%), Positives = 167/348 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R +++
Sbjct: 2987 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSY 3045
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 3046 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3104
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3162
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3220
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
SG V+TWGKG LGHG ++ P+ + L+ V V + D+G VY
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G G G G + +P ++ L +++++ G H+V T
Sbjct: 3281 WGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 343 (125.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 96/308 (31%), Positives = 153/308 (49%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++ +++ A+ +A +++ +VF G N G ++ I P E L + Q
Sbjct: 2939 NSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2996
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGP 278
V G +T+ G V+ CG T+G+LG G + P P+ I L V V + +G
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGG 3056
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ A+T +G V+S+G G + LGH + + +PR I+ + K I ++ G H AL
Sbjct: 3057 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3114
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSV 396
SSG +YTWG G G LGHGD + P+ + L H +QV C +R +T L D G V
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3174
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
+ +G FG LG RG S+ P+ ++ L V QI G ++ +T G ++ +G
Sbjct: 3175 FSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 457 NERAQLGH 464
+ +LGH
Sbjct: 3232 GDYFRLGH 3239
Score = 337 (123.7 bits), Expect = 5.8e-27, P = 5.8e-27
Identities = 97/348 (27%), Positives = 159/348 (45%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 3951 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 4010 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L + VV +AAG ++ VT G +Y++G G LGH +
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + + +GD + L V++WG G G LG G +
Sbjct: 4128 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4187
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 4188 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 4244
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V T+ G ++ +GDN+ QLG T P
Sbjct: 4245 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292
Score = 323 (118.8 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 93/312 (29%), Positives = 152/312 (48%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V Q++ +E + ++G+V+T NS DT P+LV+ L ++ A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501
Query: 225 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ +G V++WG G G LG G P+ + L+ V+V + + L G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Query: 458 ERAQLGH-DTLR 468
++ Q H DTLR
Sbjct: 737 DQCQ--HFDTLR 746
Score = 293 (108.2 bits), Expect = 7.9e-22, P = 7.9e-22
Identities = 77/247 (31%), Positives = 124/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V I+ G T+ +TD ++ +GD + +LG G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4185 CKVPMKI 4191
Score = 287 (106.1 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 91/326 (27%), Positives = 152/326 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L +Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV-YTQAYNSD-TLAPQLVQGLA-SRNIVKI 498
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 499 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 552
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 611
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ VV++ G + +
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSI 670
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 728
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEP 368
V++WG H D + T PEP
Sbjct: 729 EVHSWGSN--DQCQHFDTLRVTKPEP 752
Score = 286 (105.7 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 84/264 (31%), Positives = 125/264 (47%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4031 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4084
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4085 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4143
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4144 RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4202
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4260
Query: 335 VVALDSSGYVYTWGKGYCGALGHG 358
V G VYTWG G LG G
Sbjct: 4261 CVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 284 (105.0 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 90/285 (31%), Positives = 128/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ SG VY WG G G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T V V T SV+
Sbjct: 3291 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVH 3335
Score = 195 (73.7 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
L +G V QIA L ++ NG VY+ S D L P+ +Q + I
Sbjct: 448 LANLG-VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIV 496
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQV 380
+ + H +AL ++G VY+WG G G LGHGD + P+ +S+ A V +
Sbjct: 497 KIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHI 556
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL- 439
+ + G +Y +G +G LG G S+ P ++ L+ V ++ G
Sbjct: 557 ACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 440 -YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF-IQEME 482
T+ VT+ G+++ +GD + +LG GC P I +Q+++
Sbjct: 614 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 658
Score = 177 (67.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3944 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 4001
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
+ G +Y G G G LG G + P L S++ +V + L G VY
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G G LG +R D RPR+++SLR V ++ G H+ VT G L+ +G
Sbjct: 4062 SWGEAEDGKLGHGNRSPCD---RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 458 ERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 4119 RYGRLGHSDSEDQLKP 4134
Score = 167 (63.8 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 63/260 (24%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 4075 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + VV ++ A + + V++ GD G R +
Sbjct: 4125 HSDSEDQ-LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 4182
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4183 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4242
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 4243 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4301
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 4302 KVN--RVACGSAHTLAWSTS 4319
Score = 156 (60.0 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4002 ADGKLYATGYGAGGRLGI---GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085
Score = 145 (56.1 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 52/169 (30%), Positives = 76/169 (44%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGLD-TKHIVGIACGPAQSFA 775
Score = 38 (18.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 391 VDTGSVYGFGW 401
+ GSV G+GW
Sbjct: 3692 ISDGSVNGWGW 3702
Score = 38 (18.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
+ W + YC A +DK P P
Sbjct: 3871 WAWFRRYCMASRVAVALDKRTPLP 3894
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 358 (131.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 96/328 (29%), Positives = 158/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3048
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308
Score = 350 (128.3 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 98/323 (30%), Positives = 158/323 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4005 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 4062 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4120
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ VV +A +G + L +T + V+S+G G
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G+ VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 4180 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4237
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
P + L+ + + + G VY +G G LG D G ++ + R
Sbjct: 4238 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG--D-GTTNAIQR 4294
Query: 421 PRILDSLRAHHVSQISTGLYHTV 443
PR++ +L+ V++++ G HT+
Sbjct: 4295 PRLVAALQGKKVNRVACGSAHTL 4317
Score = 346 (126.9 bits), Expect = 3.8e-28, P = 3.8e-28
Identities = 102/348 (29%), Positives = 166/348 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R +++
Sbjct: 2988 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSY 3046
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 3047 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3105
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3163
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3221
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
SG V+TWGKG LGHG ++ P+ + L+ V V + D G VY
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYA 3281
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G G G G + +P ++ L +++++ G H+V T
Sbjct: 3282 WGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 342 (125.4 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 96/308 (31%), Positives = 153/308 (49%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++ +++ A+ +A +++ +VF G N G ++ I P E L + Q
Sbjct: 2940 NSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2997
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGP 278
V G +T+ G V+ CG T+G+LG G + P P+ I L V V + +G
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGG 3057
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ A+T +G V+S+G G + LGH + + +PR I+ + K I ++ G H AL
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3115
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSV 396
SSG +YTWG G G LGHGD + P+ + L H +QV C +R +T L D G V
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3175
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
+ +G FG LG RG S+ P+ ++ L V QI G ++ +T G ++ +G
Sbjct: 3176 FSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 457 NERAQLGH 464
+ +LGH
Sbjct: 3233 GDYFRLGH 3240
Score = 338 (124.0 bits), Expect = 5.8e-26, Sum P(2) = 5.8e-26
Identities = 98/348 (28%), Positives = 159/348 (45%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 3954 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 4013 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L + VV +AAG ++ VT G +Y++G G LGH +
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + V +GD + L V++WG G G LG G +
Sbjct: 4131 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4190
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 4191 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 4247
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V T+ G ++ +GDN+ QLG T P
Sbjct: 4248 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295
Score = 323 (118.8 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 93/312 (29%), Positives = 152/312 (48%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V Q++ +E + ++G+V+T NS DT P+LV+ L ++ A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502
Query: 225 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ +G V++WG G G LG G P+ + L+ V+V + + L G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 458 ERAQLGH-DTLR 468
++ Q H DTLR
Sbjct: 738 DQCQ--HFDTLR 747
Score = 292 (107.8 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 76/247 (30%), Positives = 124/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V ++ G T+ +TD ++ +GD + +LG G
Sbjct: 4131 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4188 CKVPMKI 4194
Score = 287 (106.1 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 91/326 (27%), Positives = 152/326 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L +Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV-YTQAYNSD-TLAPQLVQGLA-SRNIVKI 499
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 500 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 553
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 612
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ VV++ G + +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSI 671
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 729
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEP 368
V++WG H D + T PEP
Sbjct: 730 EVHSWGSN--DQCQHFDTLRVTKPEP 753
Score = 287 (106.1 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 85/264 (32%), Positives = 125/264 (47%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4034 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4087
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4088 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4146
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
V G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4147 RVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4205
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4206 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4263
Query: 335 VVALDSSGYVYTWGKGYCGALGHG 358
V G VYTWG G LG G
Sbjct: 4264 CVCCTEDGEVYTWGDNDEGQLGDG 4287
Score = 280 (103.6 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 88/285 (30%), Positives = 128/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ +G VY WG G G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T + V T SV+
Sbjct: 3292 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTIDVATPSVH 3336
Score = 195 (73.7 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
L +G V QIA L ++ NG VY+ S D L P+ +Q + I
Sbjct: 449 LANLG-VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIV 497
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQV 380
+ + H +AL ++G VY+WG G G LGHGD + P+ +S+ A V +
Sbjct: 498 KIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHI 557
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL- 439
+ + G +Y +G +G LG G S+ P ++ L+ V ++ G
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSG 614
Query: 440 -YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF-IQEME 482
T+ VT+ G+++ +GD + +LG GC P I +Q+++
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659
Score = 177 (67.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3947 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 4004
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
+ G +Y G G G LG G + P L S++ +V + L G VY
Sbjct: 4005 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G G LG +R D RPR+++SLR V ++ G H+ VT G L+ +G
Sbjct: 4065 SWGEAEDGKLGHGNRSPCD---RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121
Query: 458 ERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 4122 RYGRLGHSDSEDQLKP 4137
Score = 168 (64.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 64/260 (24%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 4078 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 4127
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + VV V+ A + + V++ GD G R +
Sbjct: 4128 HSDSEDQ-LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 4185
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4186 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4245
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 4246 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4304
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 4305 KVN--RVACGSAHTLAWSTS 4322
Score = 156 (60.0 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4005 ADGKLYATGYGAGGRLGI---GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088
Score = 145 (56.1 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 52/169 (30%), Positives = 76/169 (44%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGLD-TKHIVGIACGPAQSFA 776
Score = 38 (18.4 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 36 ELTSKTFGGSHGLYPQKFRSLVDLAASQL 64
E+ S G YPQ L++L ++L
Sbjct: 3570 EVLSAVLSGMGTAYPQVADMLLELCVTEL 3598
Score = 38 (18.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 391 VDTGSVYGFGW 401
+ GSV G+GW
Sbjct: 3695 ISDGSVNGWGW 3705
Score = 38 (18.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
+ W + YC A +DK P P
Sbjct: 3874 WAWFRRYCMASRVAVALDKRTPLP 3897
Score = 37 (18.1 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 256 RPTPKSIAPLEEVGS 270
RPT K + L VGS
Sbjct: 184 RPTGKGVEGLARVGS 198
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 361 (132.1 bits), Expect = 7.2e-32, P = 7.2e-32
Identities = 99/323 (30%), Positives = 151/323 (46%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
V ++ HA V + G+ F+ G+ S GH D+N I +P+L++AL + V
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
G + +T+ G ++T G G LGHG+ + PK + L E V IA GP +
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD---- 339
VT G +++FG G+ LGHG++ PR + + KG+ VR + G H A+
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 485
Query: 340 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
SSG ++TWG G G LGHG++ K +P +++L QV T L
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 545
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
+G VY G +G LG +D R+ L V +I+ G YH V+T R +
Sbjct: 546 TSGHVYTMGSPVYGQLG---NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602
Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
+ +G +LGH + PT
Sbjct: 603 YTWGKGSNGRLGHGDVDDRNSPT 625
Score = 324 (119.1 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 93/284 (32%), Positives = 138/284 (48%)
Query: 105 DIVETSAGNMQITT-GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFP-S 161
D + T+ N+++ G +H+ ++ S +++ G GVLGHG E + V R+NF
Sbjct: 355 DALNTT--NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLE 411
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
HV ++ H A V +GQ+FT GD + GH D + +F PR V++LKG+ +
Sbjct: 412 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRA 470
Query: 222 TAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
G+ T + G + T G G+LGHG+ + P +A L E
Sbjct: 471 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP- 529
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
+ Q+A G S +A+T +G VY+ GS LG+ D P ++ K V ++
Sbjct: 530 NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSF-VEEIA 587
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
G HV L S VYTWGKG G LGHGD D+ P + SLK
Sbjct: 588 CGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLK 631
Score = 258 (95.9 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 76/273 (27%), Positives = 123/273 (45%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P+ +E+ + + + G +T +G + G + G+LGHG + PK I L
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
++ +A G + AVT +G +Y++G G LGHG + P+ + F +GIHV
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVN-FLLEGIHVS 416
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
++ G H + S+G ++T+G G G LGHGD+ +P + SLK V+
Sbjct: 417 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 476
Query: 387 TFVLVDT--GSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
T +V+ GS F W G G G G + L P + +L + Q++
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTW-GDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVA 535
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
G TV +T G ++ G QLG+ G
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHADG 568
Score = 257 (95.5 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 90/343 (26%), Positives = 139/343 (40%)
Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H +L++ FS G G LGHG ++ I+ + ++ V+ E H
Sbjct: 313 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN-IQQPKLIDALNTTNIELVACGEFH 371
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+ V SG ++T G GH + R+ L+G+ + G T +T
Sbjct: 372 SCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSA 431
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYML 282
G + T G T G LGHGD P+ + L+ +VV++ G S
Sbjct: 432 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSS- 490
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+ +G ++++G G LGHG + +L P + +V+ G VAL +SG
Sbjct: 491 SNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF--CQVACGHSLTVALTTSG 548
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
+VYT G G LG+ KT L ++ VL VY +G
Sbjct: 549 HVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKG 608
Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
G LG D V D+ P +++SL+ V I+ G T V
Sbjct: 609 SNGRLGHGD--VDDRN-SPTLVESLKDKQVKSIACGTNFTAAV 648
Score = 241 (89.9 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 72/248 (29%), Positives = 112/248 (45%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G YHT +++++ +F+ G GVLGHG + + + ++ V+ + H
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 476
Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A V++ SG++FT GD GH + P P V AL QV
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 535
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
G + T LT GHV+T GS +GQLG+ D TP + V +IA G ++
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVA 594
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+T VY++G GSN LGHG+ D P +++ + K V ++ G A+
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK--QVKSIACGTNFTAAV---- 648
Query: 343 YVYTWGKG 350
++ W G
Sbjct: 649 CIHRWASG 656
Score = 212 (79.7 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 73/247 (29%), Positives = 115/247 (46%)
Query: 237 VHTCGSNT-HGQL-GHGDTLDRPTPKSIAPLEEVGSVVQI--AAGPSYMLAVTGNGVVYS 292
VH+ GS++ HG + G G R + S GS A G + + G G+
Sbjct: 221 VHSGGSDSMHGHMRGMGMDAFRVSMSSAVSSSSHGSGHDDGDALGDVF---IWGEGIGEG 277
Query: 293 FGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
G N +G + D L P+A+++ + V ++ G +H V + G ++WG+
Sbjct: 278 VLGGGNRRVGSSFDIKMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEE 335
Query: 351 YCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G LGHG + + P+ + +L + ++ + C V + +G +Y +G FG LG
Sbjct: 336 SEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTL-SGDLYTWGKGDFGVLGH 394
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
+ VS V + R+ L HVS I+ G YHT VVT G+LF FGD LGH +
Sbjct: 395 GNE-VSHWVPK-RVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKS 452
Query: 470 CLEPTEI 476
P E+
Sbjct: 453 VFIPREV 459
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 358 (131.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 96/328 (29%), Positives = 158/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 2911 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2968
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 2969 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3027
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3028 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3085
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3086 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3145
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3146 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3202
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3203 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3228
Score = 346 (126.9 bits), Expect = 3.7e-28, P = 3.7e-28
Identities = 102/348 (29%), Positives = 166/348 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R +++
Sbjct: 2908 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSY 2966
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 2967 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3025
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3026 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3083
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3084 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3141
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
SG V+TWGKG LGHG ++ P+ + L+ V V + D G VY
Sbjct: 3142 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYA 3201
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G G G G + +P ++ L +++++ G H+V T
Sbjct: 3202 WGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3246
Score = 345 (126.5 bits), Expect = 5.2e-28, P = 5.2e-28
Identities = 98/323 (30%), Positives = 157/323 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 3925 ADGKLYATGYGAGGRLGVGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3981
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G V AG + +T G ++T G
Sbjct: 3982 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGK 4040
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ VV +A +G + L +T + V+S+G G
Sbjct: 4041 GRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4099
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G+ VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 4100 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4157
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
P + L+ + + + G VY +G G LG D G ++ + R
Sbjct: 4158 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG--D-GTTNAIQR 4214
Query: 421 PRILDSLRAHHVSQISTGLYHTV 443
PR++ +L+ V++++ G HT+
Sbjct: 4215 PRLVAALQGKKVNRVACGSAHTL 4237
Score = 343 (125.8 bits), Expect = 9.8e-28, P = 9.8e-28
Identities = 96/308 (31%), Positives = 153/308 (49%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++ +++ A+ +A +++ +VF G N G ++ I P E L + Q
Sbjct: 2860 NSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2917
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGP 278
V G +T+ G V+ CG T+G+LG G + P P+ I L V V + +G
Sbjct: 2918 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGG 2977
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ A+T +G V+S+G G + LGH + + +PR I+ + K I ++ G H AL
Sbjct: 2978 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3035
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSV 396
SSG +YTWG G G LGHGD + P+ + L H +QV C +R +T L D G V
Sbjct: 3036 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3095
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
+ +G FG LG RG S+ P+ ++ L V QI G ++ +T G ++ +G
Sbjct: 3096 FSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3152
Query: 457 NERAQLGH 464
+ +LGH
Sbjct: 3153 GDYFRLGH 3160
Score = 335 (123.0 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 98/348 (28%), Positives = 159/348 (45%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T +A VQ+ E V G+++
Sbjct: 3874 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 3932
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 3933 GYGAGGRLGVGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3991
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L VV +AAG ++ VT G +Y++G G LGH +
Sbjct: 3992 GKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4050
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + V +GD + L V++WG G G LG G +
Sbjct: 4051 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4110
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 4111 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 4167
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V ++ G ++ +GDN+ QLG T P
Sbjct: 4168 GLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP 4215
Score = 322 (118.4 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 93/312 (29%), Positives = 152/312 (48%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V Q++ +E + ++G+V+T NS DT P+LV+ L ++ A
Sbjct: 364 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 412
Query: 225 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 472
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 473 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 530
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ +G V++WG G G LG G P+ + L+ V+V + + L G VY
Sbjct: 531 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 590
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 591 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 647
Query: 458 ERAQLGH-DTLR 468
++ Q H DTLR
Sbjct: 648 DQCQ--HFDTLR 657
Score = 293 (108.2 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 76/247 (30%), Positives = 124/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3875 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 3930
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 3931 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3990
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 3991 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4050
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V ++ G T+ +TD ++ +GD + +LG G
Sbjct: 4051 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4107
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4108 CKVPMKI 4114
Score = 289 (106.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 85/264 (32%), Positives = 125/264 (47%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 3954 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4007
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4008 IESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4066
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
V G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4067 RVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4125
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4126 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4183
Query: 335 VVALDSSGYVYTWGKGYCGALGHG 358
V G VYTWG G LG G
Sbjct: 4184 CVCCSEDGEVYTWGDNDEGQLGDG 4207
Score = 286 (105.7 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 91/326 (27%), Positives = 152/326 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L +Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 353 PIQCEGLANLGVTQIACAEKRFLILSRNGRV-YTQAYNSD-TLAPQLVQGLA-SRNIVKI 409
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 410 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 463
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 464 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 522
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ VV++ G + +
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSV 581
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 639
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEP 368
V++WG H D + T PEP
Sbjct: 640 EVHSWGSN--DQCQHFDTLRVTKPEP 663
Score = 281 (104.0 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 89/285 (31%), Positives = 128/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 2977 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3035
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3036 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3094
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3095 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3153
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ +G VY WG G G
Sbjct: 3154 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3211
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T V V T SV+
Sbjct: 3212 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVH 3256
Score = 195 (73.7 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
L +G V QIA L ++ NG VY+ S D L P+ +Q + I
Sbjct: 359 LANLG-VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIV 407
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQV 380
+ + H +AL ++G VY+WG G G LGHGD + P+ +S+ A V +
Sbjct: 408 KIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHI 467
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL- 439
+ + G +Y +G +G LG G S+ P ++ L+ V ++ G
Sbjct: 468 ACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSG 524
Query: 440 -YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF-IQEME 482
T+ VT+ G+++ +GD + +LG GC P I +Q+++
Sbjct: 525 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 569
Score = 179 (68.1 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3867 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVT 3924
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
+ G +Y G G G LG G + P L S++ +V + L G VY
Sbjct: 3925 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3984
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G G LG +R D RPR+++SLR V ++ G H+ VT G L+ +G
Sbjct: 3985 SWGEAEDGKLGHGNRSPCD---RPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4041
Query: 458 ERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 4042 RYGRLGHSDSEDQLKP 4057
Score = 162 (62.1 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 95 RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
R ++S+ +++V+ +AG G + + + +++ G G LGH Q +
Sbjct: 4006 RVIESLR-GTEVVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ-LKP 4057
Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ VV V+ A + + V++ GD G R + P +++
Sbjct: 4058 KLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGSDGCKVPMKIDS 4116
Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
L G+ +V G F+ LT G V+T G + +LGHG P+ + L+ V+
Sbjct: 4117 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK-KVI 4175
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
IA G + + + +G VY++G LG G + +PR + + K ++ RV+ G
Sbjct: 4176 AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN--RVACGS 4233
Query: 333 EHVVALDSS 341
H +A +S
Sbjct: 4234 AHTLAWSTS 4242
Score = 155 (59.6 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3865 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 3924
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 3925 ADGKLYATGYGAGGRLGV---GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3981
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 3982 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4008
Score = 147 (56.8 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 52/169 (30%), Positives = 76/169 (44%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVVKVRCGSQFSV 581
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 640
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 641 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGLD-TKHIVGIACGPAQSFA 686
Score = 38 (18.4 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 391 VDTGSVYGFGW 401
+ GSV G+GW
Sbjct: 3615 ISDGSVNGWGW 3625
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 358 (131.1 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 96/328 (29%), Positives = 158/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 3001 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3058
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3059 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3117
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3118 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3175
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3176 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3235
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3236 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3292
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3293 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3318
Score = 346 (126.9 bits), Expect = 3.8e-28, P = 3.8e-28
Identities = 102/348 (29%), Positives = 166/348 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V++CG + G LG G ++ V R +++
Sbjct: 2998 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSY 3056
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 3057 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3115
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3116 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3173
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3174 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3231
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
SG V+TWGKG LGHG ++ P+ + L+ V V + D G VY
Sbjct: 3232 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYA 3291
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G G G G + +P ++ L +++++ G H+V T
Sbjct: 3292 WGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3336
Score = 345 (126.5 bits), Expect = 5.4e-28, P = 5.4e-28
Identities = 98/323 (30%), Positives = 157/323 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4015 ADGKLYATGYGAGGRLGVGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4071
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G V AG + +T G ++T G
Sbjct: 4072 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGK 4130
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ VV +A +G + L +T + V+S+G G
Sbjct: 4131 GRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4189
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G+ VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 4190 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4247
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
P + L+ + + + G VY +G G LG D G ++ + R
Sbjct: 4248 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG--D-GTTNAIQR 4304
Query: 421 PRILDSLRAHHVSQISTGLYHTV 443
PR++ +L+ V++++ G HT+
Sbjct: 4305 PRLVAALQGKKVNRVACGSAHTL 4327
Score = 343 (125.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 96/308 (31%), Positives = 153/308 (49%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++ +++ A+ +A +++ +VF G N G ++ I P E L + Q
Sbjct: 2950 NSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 3007
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGP 278
V G +T+ G V+ CG T+G+LG G + P P+ I L V V + +G
Sbjct: 3008 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGG 3067
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ A+T +G V+S+G G + LGH + + +PR I+ + K I ++ G H AL
Sbjct: 3068 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3125
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSV 396
SSG +YTWG G G LGHGD + P+ + L H +QV C +R +T L D G V
Sbjct: 3126 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3185
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
+ +G FG LG RG S+ P+ ++ L V QI G ++ +T G ++ +G
Sbjct: 3186 FSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3242
Query: 457 NERAQLGH 464
+ +LGH
Sbjct: 3243 GDYFRLGH 3250
Score = 335 (123.0 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 98/348 (28%), Positives = 159/348 (45%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T +A VQ+ E V G+++
Sbjct: 3964 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4022
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 4023 GYGAGGRLGVGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4081
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L VV +AAG ++ VT G +Y++G G LGH +
Sbjct: 4082 GKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4140
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + V +GD + L V++WG G G LG G +
Sbjct: 4141 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4200
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 4201 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 4257
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V ++ G ++ +GDN+ QLG T P
Sbjct: 4258 GLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP 4305
Score = 322 (118.4 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 93/312 (29%), Positives = 152/312 (48%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V Q++ +E + ++G+V+T NS DT P+LV+ L ++ A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502
Query: 225 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ +G V++WG G G LG G P+ + L+ V+V + + L G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 458 ERAQLGH-DTLR 468
++ Q H DTLR
Sbjct: 738 DQCQ--HFDTLR 747
Score = 293 (108.2 bits), Expect = 7.9e-22, P = 7.9e-22
Identities = 76/247 (30%), Positives = 124/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4020
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4021 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4080
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4081 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4140
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V ++ G T+ +TD ++ +GD + +LG G
Sbjct: 4141 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4197
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4198 CKVPMKI 4204
Score = 289 (106.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 85/264 (32%), Positives = 125/264 (47%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4044 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4097
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4098 IESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4156
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
V G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4157 RVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4215
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4216 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4273
Query: 335 VVALDSSGYVYTWGKGYCGALGHG 358
V G VYTWG G LG G
Sbjct: 4274 CVCCSEDGEVYTWGDNDEGQLGDG 4297
Score = 286 (105.7 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 91/326 (27%), Positives = 152/326 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L +Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV-YTQAYNSD-TLAPQLVQGLA-SRNIVKI 499
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 500 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 553
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 612
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ VV++ G + +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSV 671
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 729
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEP 368
V++WG H D + T PEP
Sbjct: 730 EVHSWGSN--DQCQHFDTLRVTKPEP 753
Score = 281 (104.0 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 89/285 (31%), Positives = 128/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3067 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3125
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3126 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3184
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3185 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3243
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ +G VY WG G G
Sbjct: 3244 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3301
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T V V T SV+
Sbjct: 3302 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVH 3346
Score = 195 (73.7 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
L +G V QIA L ++ NG VY+ S D L P+ +Q + I
Sbjct: 449 LANLG-VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIV 497
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQV 380
+ + H +AL ++G VY+WG G G LGHGD + P+ +S+ A V +
Sbjct: 498 KIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHI 557
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL- 439
+ + G +Y +G +G LG G S+ P ++ L+ V ++ G
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSG 614
Query: 440 -YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF-IQEME 482
T+ VT+ G+++ +GD + +LG GC P I +Q+++
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659
Score = 179 (68.1 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3957 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVT 4014
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
+ G +Y G G G LG G + P L S++ +V + L G VY
Sbjct: 4015 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4074
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G G LG +R D RPR+++SLR V ++ G H+ VT G L+ +G
Sbjct: 4075 SWGEAEDGKLGHGNRSPCD---RPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4131
Query: 458 ERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 4132 RYGRLGHSDSEDQLKP 4147
Score = 162 (62.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 95 RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
R ++S+ +++V+ +AG G + + + +++ G G LGH Q +
Sbjct: 4096 RVIESLR-GTEVVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ-LKP 4147
Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ VV V+ A + + V++ GD G R + P +++
Sbjct: 4148 KLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGSDGCKVPMKIDS 4206
Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
L G+ +V G F+ LT G V+T G + +LGHG P+ + L+ V+
Sbjct: 4207 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK-KVI 4265
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
IA G + + + +G VY++G LG G + +PR + + K ++ RV+ G
Sbjct: 4266 AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN--RVACGS 4323
Query: 333 EHVVALDSS 341
H +A +S
Sbjct: 4324 AHTLAWSTS 4332
Score = 155 (59.6 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3955 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4014
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4015 ADGKLYATGYGAGGRLGV---GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4071
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4098
Score = 147 (56.8 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 52/169 (30%), Positives = 76/169 (44%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L+ +V IA GP+ A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGLD-TKHIVGIACGPAQSFA 776
Score = 38 (18.4 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 391 VDTGSVYGFGW 401
+ GSV G+GW
Sbjct: 3705 ISDGSVNGWGW 3715
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 360 (131.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 96/328 (29%), Positives = 159/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V++CG+ N G PI PR + AL
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308
Score = 351 (128.6 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 103/348 (29%), Positives = 167/348 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V+SCG + G LG G ++ V R +++
Sbjct: 2988 ETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSY 3046
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 3047 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3105
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3163
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3221
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
SG V+TWGKG LGHG ++ P+ + L+ V V + D+G VY
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYA 3281
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G G G G + +P ++ L +++++ G H+V T
Sbjct: 3282 WGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 350 (128.3 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 98/323 (30%), Positives = 158/323 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 4004 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4119
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G+ VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 4179 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4236
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
P + L+ + + + G VY +G G LG D G ++ + R
Sbjct: 4237 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG--D-GTTNAIQR 4293
Query: 421 PRILDSLRAHHVSQISTGLYHTV 443
PR++ +L+ V++++ G HT+
Sbjct: 4294 PRLVAALQGKKVNRVACGSAHTL 4316
Score = 342 (125.4 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 94/286 (32%), Positives = 142/286 (49%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LGH + + +PR I+ + K I ++ G H AL SSG +YTWG G G LGHGD
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137
Query: 361 IDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
+ P+ + L H +QV C +R +T L D G V+ +G FG LG RG S+
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194
Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
P+ ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 337 (123.7 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 97/348 (27%), Positives = 159/348 (45%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 3953 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 4012 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L + VV +AAG ++ VT G +Y++G G LGH +
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + + +GD + L V++WG G G LG G +
Sbjct: 4130 SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4189
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 4190 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 4246
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V T+ G ++ +GDN+ QLG T P
Sbjct: 4247 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294
Score = 325 (119.5 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 96/333 (28%), Positives = 161/333 (48%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+QV+ +E + ++G+V+T NS + P+LV+ L ++ A
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502
Query: 225 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ +G V++WG G G LG G P+ + L+ ++V + + L G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 458 ERAQLGH-DTLRGCL-EPTEIFIQEMEEDTGLA 488
++ Q H DTLR EPT + + + G+A
Sbjct: 738 DQCQ--HFDTLRVTKPEPTALPGLDSKHIVGIA 768
Score = 293 (108.2 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 77/247 (31%), Positives = 124/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V I+ G T+ +TD ++ +GD + +LG G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4187 CKVPMKI 4193
Score = 285 (105.4 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 84/264 (31%), Positives = 125/264 (47%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4033 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4086
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4087 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4145
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4146 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4204
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4262
Query: 335 VVALDSSGYVYTWGKGYCGALGHG 358
V G VYTWG G LG G
Sbjct: 4263 CVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 285 (105.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 95/342 (27%), Positives = 156/342 (45%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L L Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRV-YTQAYNSDMLAP-QLVQGLA-SRNIVKI 499
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 500 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 553
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 612
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ V+++ G + +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSI 671
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 729
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKS-HLAVQVC 381
V++WG H D + T PEP L L S H+ C
Sbjct: 730 EVHSWGSN--DQCQHFDTLRVTKPEPTALPGLDSKHIVGIAC 769
Score = 284 (105.0 bits), Expect = 8.7e-19, Sum P(3) = 8.7e-19
Identities = 90/285 (31%), Positives = 128/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ SG VY WG G G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T V V T SV+
Sbjct: 3292 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVH 3336
Score = 282 (104.3 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 82/264 (31%), Positives = 123/264 (46%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 275
++ T GL T TIR V G N QLG G + P+ ++++ L +VVQ+A
Sbjct: 2946 RKKTPGLESTA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 2999
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
G + AVT G VYS G +N LG G + PR I + V V +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
AL G V++WG+G G LGH ++ P + +LK+ + + L +G
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 452
+Y +G +G LG D L+P+++ L H V Q++ G T+ +TD G +F
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
+GD + +LG GC P I
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNI 3200
Score = 177 (67.4 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3946 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 4003
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
+ G +Y G G G LG G + P L S++ +V + L G VY
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G G LG +R D RPR+++SLR V ++ G H+ VT G L+ +G
Sbjct: 4064 SWGEAEDGKLGHGNRSPCD---RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120
Query: 458 ERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 4121 RYGRLGHSDSEDQLKP 4136
Score = 166 (63.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 62/260 (23%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 4077 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + V+ ++ A + + V++ GD G R +
Sbjct: 4127 HSDSEDQ-LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 4184
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4185 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4244
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 4245 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4303
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 4304 KVN--RVACGSAHTLAWSTS 4321
Score = 156 (60.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4004 ADGKLYATGYGAGGRLGI---GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087
Score = 43 (20.2 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 62 SQLCALHSIYAGM-SRNVQIE 81
SQLC++ YAG S Q+E
Sbjct: 2170 SQLCSVTQSYAGKTSERAQLE 2190
Score = 39 (18.8 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 15 SHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQL 64
+ ++ E+L S E+ S G YPQ L++L ++L
Sbjct: 3548 TRVVVELLKLSVCSRAGDKGREVLSAVLSGMGTAYPQVADMLLELCVTEL 3597
Score = 38 (18.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 391 VDTGSVYGFGW 401
+ GSV G+GW
Sbjct: 3694 ISDGSVNGWGW 3704
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 359 (131.4 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 100/323 (30%), Positives = 165/323 (51%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
F S V +V+ NH+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
V G + + L+ RG + + G+ + GQLG T D P+ I L + +++Q++
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA+ +G +++G S+ LG G+++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
AL SG V+ WG G LG DE D+ P + L++ V + + T VL +G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
V+ FG G LG ++D+V R+L+ L V+QI+ G HT+ V G ++ F
Sbjct: 263 VFTFGAGSCGQLGHDS--MNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 455 GDNERAQLG--HDTLRGCLEPTE 475
G + QLG H C P +
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK 342
Score = 356 (130.4 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 98/287 (34%), Positives = 146/287 (50%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ P++ + K+V G N + FL G V+TCG NT GQLGH ++P + I
Sbjct: 22 VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--EQIG 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
L + +V +A G S+ LA++ G ++S+G+GS+ LG D + PR IQ ++
Sbjct: 80 ALADQ-HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 138
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVC 381
I ++VS G+ H +AL + G +TWGK G LG G E + P+ + SL+ QV
Sbjct: 139 I--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVA 196
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
A +F L +G+V+G+G G LG D D+ P + LR V IS G H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMNNAGQLGLSDE--EDRE-SPCHVKLLRTQKVVYISCGEEH 253
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
T V+T G +F FG QLGHD++ + P + E T +A
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA 300
Score = 347 (127.2 bits), Expect = 3.7e-29, P = 3.7e-29
Identities = 95/320 (29%), Positives = 150/320 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L+ + V++CG + G LGH E + +I + H+V V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
GQ+F+ G S G T + PRL++ L QV+ G L G
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
T G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ +G V+ +G +
Sbjct: 160 TWGKNSHGQLGLGKEYPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
LG ++ D P ++ R + VV +S G+EH L SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 416
D+ P + L Q+ ++ T V +G +Y FG G LG G +
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG---TGHTC 333
Query: 417 KVLRPRILDSLRAHHVSQIS 436
V P + A H Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353
Score = 297 (109.6 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 87/273 (31%), Positives = 131/273 (47%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG T V+ R I + ++QVS
Sbjct: 87 VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
G LG G + P P+ + + Q+ AR
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSAR 355
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 357 (130.7 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 101/337 (29%), Positives = 165/337 (48%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 3288 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3346
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 3347 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 3405
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ LAV+ +G +
Sbjct: 3406 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 3464
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V++FG G LG G + P+ + GI + +V+ G + VAL G+VYT+G+
Sbjct: 3465 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLC--GIGIKKVACGTQFSVALTKDGHVYTFGQ 3522
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
L G + P+ + L + V T L TG VY +G G LG
Sbjct: 3523 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 3582
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
G ++ V P ++ L+ ++ QIS G H+ T
Sbjct: 3583 ---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 3616
Score = 287 (106.1 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 87/324 (26%), Positives = 150/324 (46%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 3281 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLTVISALQGFVV 3338
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 3339 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMS 3397
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 3398 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 3455
Query: 336 VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+A+ + G V+ +G G G LG G+ K+ P+ + L +V + + L G
Sbjct: 3456 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 3515
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
VY FG +G P+ G + RP+ + L + ++ G HT+ + G ++ +
Sbjct: 3516 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 3572
Query: 455 GDNERAQLGHDTLRGCLEPTEIFI 478
G N QLG EPT + +
Sbjct: 3573 GSNSEGQLGLGHTNHVREPTLVTV 3596
Score = 240 (89.5 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 71/231 (30%), Positives = 108/231 (46%)
Query: 237 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V+ G+ HGQL G + P + AP Q+ G + + NG V + G
Sbjct: 3256 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3310
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
GS LG G D I + + + S G D H +AL SG V++WG G G
Sbjct: 3311 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3370
Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LGHG+ + P + +L+ VQ+ C K V D G ++ FG +G LG +
Sbjct: 3371 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD-GKLFTFGNGDYGRLGLGN-- 3427
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
S+K L R+ +L + + Q++ GL HT+ V+ D ++ FGD + +LG
Sbjct: 3428 TSNKKLPERVT-ALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 3477
Score = 131 (51.2 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
VY WG G G L E + + P ++ A QV + TFV+ G+V G
Sbjct: 3256 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3312
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
+G LG +G SD + ++ +L+ V+Q+ T H++ +T+ G +F +GD +
Sbjct: 3313 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3369
Query: 461 QLGHDTLRGCLEPTEIFIQEMEE 483
+LGH P +I + EE
Sbjct: 3370 KLGHGNSDRQRRPRQIEALQGEE 3392
Score = 65 (27.9 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
CG ++ PI +P+ V L G+ +Q++AG
Sbjct: 4 CGQGNSTGPITKPKKVSGLDGIAIQQISAG 33
Score = 61 (26.5 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 246 GQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 2 GQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 41
Score = 53 (23.7 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQLCALH 68
++ LP + ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL L
Sbjct: 1103 LQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQLKNLL 1160
Query: 69 SIYAGM 74
S AG+
Sbjct: 1161 S-QAGV 1165
Score = 51 (23.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 322 GIHVVRVSAGDEHVVA---LDSSGYVYTWGKGYC 352
GI + ++SAG H +A L V W + YC
Sbjct: 24 GIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYC 57
Score = 43 (20.2 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 24/89 (26%), Positives = 35/89 (39%)
Query: 257 PTPKSIA-PLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
P P +IA PL E+G S+ QIA G + + + + H DE +P++
Sbjct: 2012 PPPPAIAVPLLEMGFSLRQIAKAME-ATGARGEADAQNITVLAMWMIEHPGHEDEEEPQS 2070
Query: 315 IQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
T R G V+ L S G
Sbjct: 2071 GSTADSRHGAAVLGSGGKSNEPCYLQSPG 2099
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 360 (131.8 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 96/328 (29%), Positives = 159/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V++CG+ N G PI PR + AL
Sbjct: 2934 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2991
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 2992 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3050
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3108
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3109 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3168
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3169 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3225
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3226 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3251
Score = 351 (128.6 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
Identities = 103/348 (29%), Positives = 167/348 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V+SCG + G LG G ++ V R +++
Sbjct: 2931 ETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSY 2989
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 2990 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 3048
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 3049 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 3106
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 3107 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 3164
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
SG V+TWGKG LGHG ++ P+ + L+ V V + D+G VY
Sbjct: 3165 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYA 3224
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G G G G + +P ++ L +++++ G H+V T
Sbjct: 3225 WGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3269
Score = 350 (128.3 bits), Expect = 8.2e-28, Sum P(2) = 8.2e-28
Identities = 98/323 (30%), Positives = 158/323 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 3947 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 4004 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4062
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 4063 GRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4121
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G+ VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 4122 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4179
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
P + L+ + + + G VY +G G LG D G ++ + R
Sbjct: 4180 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG--D-GTTNAIQR 4236
Query: 421 PRILDSLRAHHVSQISTGLYHTV 443
PR++ +L+ V++++ G HT+
Sbjct: 4237 PRLVAALQGKKVNRVACGSAHTL 4259
Score = 342 (125.4 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 94/286 (32%), Positives = 142/286 (49%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2962
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 2963 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3022
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LGH + + +PR I+ + K I ++ G H AL SSG +YTWG G G LGHGD
Sbjct: 3023 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3080
Query: 361 IDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
+ P+ + L H +QV C +R +T L D G V+ +G FG LG RG S+
Sbjct: 3081 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3137
Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
P+ ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 3138 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3183
Score = 337 (123.7 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 97/348 (27%), Positives = 159/348 (45%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 3896 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3954
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 3955 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4013
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L + VV +AAG ++ VT G +Y++G G LGH +
Sbjct: 4014 GKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4072
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + + +GD + L V++WG G G LG G +
Sbjct: 4073 SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4132
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 4133 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 4189
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V T+ G ++ +GDN+ QLG T P
Sbjct: 4190 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4237
Score = 325 (119.5 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 96/333 (28%), Positives = 161/333 (48%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+QV+ +E + ++G+V+T NS + P+LV+ L ++ A
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 447
Query: 225 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ +G V++WG G G LG G P+ + L+ ++V + + L G VY
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 625
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 626 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682
Query: 458 ERAQLGH-DTLRGCL-EPTEIFIQEMEEDTGLA 488
++ Q H DTLR EPT + + + G+A
Sbjct: 683 DQCQ--HFDTLRVTKPEPTALPGLDTKHIVGIA 713
Score = 293 (108.2 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 77/247 (31%), Positives = 124/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3952
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 3953 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4012
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4013 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4072
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V I+ G T+ +TD ++ +GD + +LG G
Sbjct: 4073 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4129
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4130 CKVPMKI 4136
Score = 285 (105.4 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 84/264 (31%), Positives = 125/264 (47%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 3976 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 4029
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4030 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 4088
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 4089 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 4147
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 4148 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 4205
Query: 335 VVALDSSGYVYTWGKGYCGALGHG 358
V G VYTWG G LG G
Sbjct: 4206 CVCCTEDGEVYTWGDNDEGQLGDG 4229
Score = 284 (105.0 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 90/285 (31%), Positives = 128/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3000 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3058
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3059 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3117
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3118 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3176
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ SG VY WG G G
Sbjct: 3177 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3234
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T V V T SV+
Sbjct: 3235 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVH 3279
Score = 282 (104.3 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 90/326 (27%), Positives = 150/326 (46%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L L Q+ + +SRN ++ N + + +Q + S +IV+
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRV-YTQAYNSDMLAP-QLVQGLA-SRNIVKI 444
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---P-ETTQCVS-FTRINFPSAAH 164
+A + G ++ L + V+S G G LGHG P E + +S F+ + H
Sbjct: 445 AAHS----DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS--GKQAGKH 498
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV ++ ++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 499 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACG 557
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
L + G V + G +G+LG G + TPK I L+++ V+++ G + +
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSI 616
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
A+T +G VYS+G G N LGHG + P+ ++ + K V+ V+AG H +AL
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK--KVIDVAAGSTHCLALTEDS 674
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEP 368
V++WG H D + T PEP
Sbjct: 675 EVHSWGSN--DQCQHFDTLRVTKPEP 698
Score = 282 (104.3 bits), Expect = 6.6e-19, Sum P(2) = 6.6e-19
Identities = 82/264 (31%), Positives = 123/264 (46%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 275
++ T GL T TIR V G N QLG G + P+ ++++ L +VVQ+A
Sbjct: 2889 RKKTPGLESTA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 2942
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
G + AVT G VYS G +N LG G + PR I + V V +G H
Sbjct: 2943 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3002
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
AL G V++WG+G G LGH ++ P + +LK+ + + L +G
Sbjct: 3003 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3062
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 452
+Y +G +G LG D L+P+++ L H V Q++ G T+ +TD G +F
Sbjct: 3063 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3119
Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
+GD + +LG GC P I
Sbjct: 3120 SWGDGDFGKLGRGGSEGCNIPQNI 3143
Score = 177 (67.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 3889 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 3946
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
+ G +Y G G G LG G + P L S++ +V + L G VY
Sbjct: 3947 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4006
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G G LG +R D RPR+++SLR V ++ G H+ VT G L+ +G
Sbjct: 4007 SWGEAEDGKLGHGNRSPCD---RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4063
Query: 458 ERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 4064 RYGRLGHSDSEDQLKP 4079
Score = 166 (63.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 62/260 (23%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 4020 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 4069
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + V+ ++ A + + V++ GD G R +
Sbjct: 4070 HSDSEDQ-LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 4127
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 4128 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4187
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 4188 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4246
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 4247 KVN--RVACGSAHTLAWSTS 4264
Score = 156 (60.0 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3887 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3946
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 3947 ADGKLYATGYGAGGRLGI---GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4030
Score = 38 (18.4 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
+ W + YC A +DK P P
Sbjct: 3816 WAWFRRYCMASRVAVALDKRTPLP 3839
Score = 38 (18.4 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 391 VDTGSVYGFGW 401
+ GSV G+GW
Sbjct: 3637 ISDGSVNGWGW 3647
Score = 37 (18.1 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 62 SQLCALHSIYAG 73
SQLC++ YAG
Sbjct: 2113 SQLCSVTQSYAG 2124
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 360 (131.8 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 96/328 (29%), Positives = 159/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V++CG+ N G PI PR + AL
Sbjct: 1799 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 1856
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 1857 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 1915
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 1916 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 1973
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 1974 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2033
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 2034 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2090
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 2091 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2116
Score = 351 (128.6 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 103/348 (29%), Positives = 167/348 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V+SCG + G LG G ++ V R +++
Sbjct: 1796 ETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSY 1854
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 1855 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 1913
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 1914 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 1971
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 1972 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 2029
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
SG V+TWGKG LGHG ++ P+ + L+ V V + D+G VY
Sbjct: 2030 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYA 2089
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G G G G + +P ++ L +++++ G H+V T
Sbjct: 2090 WGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2134
Score = 350 (128.3 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 98/323 (30%), Positives = 158/323 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 2776 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2832
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 2833 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 2891
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 2892 GRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 2950
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G+ VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 2951 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 3008
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
P + L+ + + + G VY +G G LG D G ++ + R
Sbjct: 3009 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG--D-GTTNAIQR 3065
Query: 421 PRILDSLRAHHVSQISTGLYHTV 443
PR++ +L+ V++++ G HT+
Sbjct: 3066 PRLVAALQGKKVNRVACGSAHTL 3088
Score = 342 (125.4 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 94/286 (32%), Positives = 142/286 (49%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 1827
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 1828 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 1887
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LGH + + +PR I+ + K I ++ G H AL SSG +YTWG G G LGHGD
Sbjct: 1888 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 1945
Query: 361 IDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
+ P+ + L H +QV C +R +T L D G V+ +G FG LG RG S+
Sbjct: 1946 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2002
Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
P+ ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 2003 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048
Score = 337 (123.7 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 97/348 (27%), Positives = 159/348 (45%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 2725 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2783
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 2784 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2842
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L + VV +AAG ++ VT G +Y++G G LGH +
Sbjct: 2843 GKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 2901
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + + +GD + L V++WG G G LG G +
Sbjct: 2902 SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 2961
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 2962 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 3018
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V T+ G ++ +GDN+ QLG T P
Sbjct: 3019 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3066
Score = 293 (108.2 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 77/247 (31%), Positives = 124/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 2726 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 2781
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 2782 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2841
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 2842 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 2901
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V I+ G T+ +TD ++ +GD + +LG G
Sbjct: 2902 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2958
Query: 470 CLEPTEI 476
C P +I
Sbjct: 2959 CKVPMKI 2965
Score = 285 (105.4 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 84/264 (31%), Positives = 125/264 (47%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 2805 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 2858
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 2859 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 2917
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 2918 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 2976
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 2977 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 3034
Query: 335 VVALDSSGYVYTWGKGYCGALGHG 358
V G VYTWG G LG G
Sbjct: 3035 CVCCTEDGEVYTWGDNDEGQLGDG 3058
Score = 284 (105.0 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 90/285 (31%), Positives = 128/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 1865 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 1923
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 1924 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1982
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2041
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ SG VY WG G G
Sbjct: 2042 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2099
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T V V T SV+
Sbjct: 2100 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVH 2144
Score = 282 (104.3 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 82/264 (31%), Positives = 123/264 (46%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 275
++ T GL T TIR V G N QLG G + P+ ++++ L +VVQ+A
Sbjct: 1754 RKKTPGLESTA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 1807
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
G + AVT G VYS G +N LG G + PR I + V V +G H
Sbjct: 1808 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 1867
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
AL G V++WG+G G LGH ++ P + +LK+ + + L +G
Sbjct: 1868 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 1927
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 452
+Y +G +G LG D L+P+++ L H V Q++ G T+ +TD G +F
Sbjct: 1928 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 1984
Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
+GD + +LG GC P I
Sbjct: 1985 SWGDGDFGKLGRGGSEGCNIPQNI 2008
Score = 177 (67.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 2718 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 2775
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
+ G +Y G G G LG G + P L S++ +V + L G VY
Sbjct: 2776 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2835
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G G LG +R D RPR+++SLR V ++ G H+ VT G L+ +G
Sbjct: 2836 SWGEAEDGKLGHGNRSPCD---RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2892
Query: 458 ERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 2893 RYGRLGHSDSEDQLKP 2908
Score = 166 (63.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 62/260 (23%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 2849 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 2898
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + V+ ++ A + + V++ GD G R +
Sbjct: 2899 HSDSEDQ-LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 2956
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 2957 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 3016
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 3017 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 3075
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 3076 KVN--RVACGSAHTLAWSTS 3093
Score = 156 (60.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 2716 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2775
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 2776 ADGKLYATGYGAGGRLGI---GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2832
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 2833 EVYSWGEAEDGKLGHGNRSPCDRPRVI 2859
Score = 38 (18.4 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 391 VDTGSVYGFGW 401
+ GSV G+GW
Sbjct: 2466 ISDGSVNGWGW 2476
Score = 37 (18.1 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 62 SQLCALHSIYAG 73
SQLC++ YAG
Sbjct: 978 SQLCSVTQSYAG 989
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 360 (131.8 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 96/328 (29%), Positives = 159/328 (48%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V++CG+ N G PI PR + AL
Sbjct: 1799 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 1856
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 1857 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 1915
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 1916 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 1973
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 1974 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2033
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 2034 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2090
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 2091 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2116
Score = 351 (128.6 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 103/348 (29%), Positives = 167/348 (47%)
Query: 108 ET-SAGNM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
ET SA N+ Q+ G ++ V+SCG + G LG G ++ V R +++
Sbjct: 1796 ETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSY 1854
Query: 165 VVQ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
VV+ V + HA + G+VF+ G+ GH + +PRL+EALK + +
Sbjct: 1855 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDI 1913
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP-- 278
G + + LT G ++T G +G+LGHGD + PK + L +G V+Q+A G
Sbjct: 1914 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRD 1971
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA+T G+V+S+G G LG G P+ I+ +G V ++ G + +AL
Sbjct: 1972 AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLAL 2029
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
SG V+TWGKG LGHG ++ P+ + L+ V V + D+G VY
Sbjct: 2030 TKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYA 2089
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G G G G + +P ++ L +++++ G H+V T
Sbjct: 2090 WGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2134
Score = 350 (128.3 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 98/323 (30%), Positives = 158/323 (48%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQSG 182
++ +++ G G LG G T+ VS T S HV V V++ H + G
Sbjct: 2812 ADGKLYATGYGAGGRLGIGG--TESVS-TPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2868
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V++ G+ GH + + P RPR++E+L+G+ V AG + +T G ++T G
Sbjct: 2869 EVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 2927
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFC 300
+G+LGH D+ D+ PK + L+ V+ IA +G + L +T + V+S+G G
Sbjct: 2928 GRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 2986
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G P I + G+ VV+V G + VAL SG VYTWGKG LGHG +
Sbjct: 2987 LGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 3044
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
P + L+ + + + G VY +G G LG D G ++ + R
Sbjct: 3045 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG--D-GTTNAIQR 3101
Query: 421 PRILDSLRAHHVSQISTGLYHTV 443
PR++ +L+ V++++ G HT+
Sbjct: 3102 PRLVAALQGKKVNRVACGSAHTL 3124
Score = 342 (125.4 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 94/286 (32%), Positives = 142/286 (49%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 1827
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 1828 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 1887
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LGH + + +PR I+ + K I ++ G H AL SSG +YTWG G G LGHGD
Sbjct: 1888 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 1945
Query: 361 IDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
+ P+ + L H +QV C +R +T L D G V+ +G FG LG RG S+
Sbjct: 1946 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2002
Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
P+ ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 2003 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048
Score = 337 (123.7 bits), Expect = 5.7e-26, Sum P(2) = 5.7e-26
Identities = 97/348 (27%), Positives = 159/348 (45%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G + G LG G E + T + VQ+ E V G+++
Sbjct: 2761 SGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2819
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
G + G T + P L+E+++ V K+V +G L+ G V++ G
Sbjct: 2820 GYGAGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2878
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G+LGHG+ P+ I L + VV +AAG ++ VT G +Y++G G LGH +
Sbjct: 2879 GKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 2937
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
D+L+P+ ++ + + + +GD + L V++WG G G LG G +
Sbjct: 2938 SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 2997
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
P + SL V+V + + L +G+VY +G + LG G D V RPR +
Sbjct: 2998 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQ 3054
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ V I+TG H V T+ G ++ +GDN+ QLG T P
Sbjct: 3055 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3102
Score = 293 (108.2 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 77/247 (31%), Positives = 124/247 (50%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 2762 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 2817
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 2818 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2877
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 2878 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 2937
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V I+ G T+ +TD ++ +GD + +LG G
Sbjct: 2938 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2994
Query: 470 CLEPTEI 476
C P +I
Sbjct: 2995 CKVPMKI 3001
Score = 285 (105.4 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 84/264 (31%), Positives = 125/264 (47%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 2841 LESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRV 2894
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 2895 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGH 2953
Query: 217 PCKQVTAGLNF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ G T LT V + G +G+LG G + P I L +G VV++
Sbjct: 2954 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKV 3012
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
G + +A+T +G VY++G G LGHG +PR +Q + K V+ ++ G H
Sbjct: 3013 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIATGSLH 3070
Query: 335 VVALDSSGYVYTWGKGYCGALGHG 358
V G VYTWG G LG G
Sbjct: 3071 CVCCTEDGEVYTWGDNDEGQLGDG 3094
Score = 284 (105.0 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 90/285 (31%), Positives = 128/285 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 1865 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 1923
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 1924 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1982
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2041
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R K I V V+ G H +A+ SG VY WG G G
Sbjct: 2042 DYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2099
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRK---TFVLVDTGSVY 397
+G P + L+ +V C T V V T SV+
Sbjct: 2100 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVH 2144
Score = 282 (104.3 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 82/264 (31%), Positives = 123/264 (46%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 275
++ T GL T TIR V G N QLG G + P+ ++++ L +VVQ+A
Sbjct: 1754 RKKTPGLESTA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 1807
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
G + AVT G VYS G +N LG G + PR I + V V +G H
Sbjct: 1808 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 1867
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
AL G V++WG+G G LGH ++ P + +LK+ + + L +G
Sbjct: 1868 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 1927
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 452
+Y +G +G LG D L+P+++ L H V Q++ G T+ +TD G +F
Sbjct: 1928 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 1984
Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
+GD + +LG GC P I
Sbjct: 1985 SWGDGDFGKLGRGGSEGCNIPQNI 2008
Score = 177 (67.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L+ G+G +Y +G LG E P + + V++ G++ + A+
Sbjct: 2754 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVT 2811
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
+ G +Y G G G LG G + P L S++ +V + L G VY
Sbjct: 2812 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2871
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G G LG +R D RPR+++SLR V ++ G H+ VT G L+ +G
Sbjct: 2872 SWGEAEDGKLGHGNRSPCD---RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2928
Query: 458 ERAQLGHDTLRGCLEP 473
+LGH L+P
Sbjct: 2929 RYGRLGHSDSEDQLKP 2944
Score = 166 (63.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 62/260 (23%), Positives = 112/260 (43%)
Query: 84 NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
NR + RV+ L+ +E +V+ +AG G + + + +++ G G LG
Sbjct: 2885 NRSPCDRPRVIESLRGIE----VVDVAAG------GAHSACVTAAGDLYTWGKGRYGRLG 2934
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTN 201
H Q + + V+ ++ A + + V++ GD G R +
Sbjct: 2935 HSDSEDQ-LKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG-RGGS 2992
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P +++L G+ +V G F+ LT G V+T G + +LGHG P+
Sbjct: 2993 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 3052
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ IA G + + T +G VY++G LG G + +PR + + K
Sbjct: 3053 VQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 3111
Query: 322 GIHVVRVSAGDEHVVALDSS 341
++ RV+ G H +A +S
Sbjct: 3112 KVN--RVACGSAHTLAWSTS 3129
Score = 156 (60.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 2752 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2811
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+ G LG G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 2812 ADGKLYATGYGAGGRLGI---GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2868
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 2869 EVYSWGEAEDGKLGHGNRSPCDRPRVI 2895
Score = 38 (18.4 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 391 VDTGSVYGFGW 401
+ GSV G+GW
Sbjct: 2502 ISDGSVNGWGW 2512
Score = 37 (18.1 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 62 SQLCALHSIYAG 73
SQLC++ YAG
Sbjct: 978 SQLCSVTQSYAG 989
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 358 (131.1 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 101/323 (31%), Positives = 164/323 (50%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
F S V +V+ NH+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
V G + + L+ RG + + G+ + GQLG T D P+ I L + +++Q++
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA+ +G +++G S+ LG G++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
AL SG V+ WG G LG DE D+ P + L++ V + + T VL +G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
V+ FG G LG ++D+V R+L+ L V+QI+ G HT+ V G ++ F
Sbjct: 263 VFTFGAGSCGQLGHDS--MNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 455 GDNERAQLG--HDTLRGCLEPTE 475
G R QLG H C P +
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342
Score = 356 (130.4 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 97/287 (33%), Positives = 146/287 (50%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ P++ + K+V G N + FL G V+TCG NT GQLGH ++P + I
Sbjct: 22 VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--EQIG 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
L + ++ +A G S+ LA++ G ++S+G+GS+ LG D + PR IQ ++
Sbjct: 80 ALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 138
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVC 381
I ++VS G+ H +AL + G +TWGK G LG G E + P+ + SL+ QV
Sbjct: 139 I--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
A +F L +G+V+G+G G LG D D+ P + LR V IS G H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMNNAGQLGLSDE--KDRE-SPCHVKLLRTQKVVYISCGEEH 253
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
T V+T G +F FG QLGHD++ + P + E T +A
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA 300
Score = 346 (126.9 bits), Expect = 5.0e-29, P = 5.0e-29
Identities = 94/320 (29%), Positives = 150/320 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L+ + V++CG + G LGH E + +I + H++ V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
GQ+F+ G S G T + PRL++ L QV+ G L G
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
T G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ +G V+ +G +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
LG ++ D P ++ R + VV +S G+EH L SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 416
D+ P + L Q+ ++ T V +G +Y FG G LG G +
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333
Query: 417 KVLRPRILDSLRAHHVSQIS 436
V P + A H Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353
Score = 297 (109.6 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 87/273 (31%), Positives = 131/273 (47%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG T V+ R I + ++QVS
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
G LG G + P P+ + + Q+ AR
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSAR 355
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 357 (130.7 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 101/337 (29%), Positives = 165/337 (48%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4032 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4090
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4091 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 4149
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ LAV+ +G +
Sbjct: 4150 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 4208
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V++FG G LG G + P+ + GI + +V+ G + VAL G+VYT+G+
Sbjct: 4209 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLC--GIGIKKVACGTQFSVALTKDGHVYTFGQ 4266
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
L G + P+ + L + V T L TG VY +G G LG
Sbjct: 4267 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4326
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
G ++ V P ++ L+ ++ QIS G H+ T
Sbjct: 4327 ---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4360
Score = 350 (128.3 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 100/340 (29%), Positives = 167/340 (49%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFC-LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
V+SFG G N LGHG+ + +P+ ++ + G+ + +V AG + +AL S+G VY WG
Sbjct: 583 VWSFGGGDNVGKLGHGDTNRVYKPKVVEALQ--GMFIRKVCAGSQSSLALTSTGQVYAWG 640
Query: 349 KGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
G C LG G E P+ + L + V + ++ V VY +G G
Sbjct: 641 CGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQC 698
Query: 408 GFPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
G +G S + +P+ + L + QIS G H++ T
Sbjct: 699 G---QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 735
Score = 305 (112.4 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 109/385 (28%), Positives = 173/385 (44%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+SD T A I TG ++ V+ GS+ L G + ++F A
Sbjct: 347 ASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDA 405
Query: 163 AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQ 220
Q + + FV+ + G V CG S G D+N +L E + + K+
Sbjct: 406 ----QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--KK 459
Query: 221 VTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IA 275
V++ G T G V + G +G+LGHG++ + PK I PL+ G VV ++
Sbjct: 460 VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCVS 517
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHT 573
Query: 336 VALDSSGY-VYTWGKG-YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
+AL G V+++G G G LGHGD P+ + +L+ +VCA + + L T
Sbjct: 574 IALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTST 633
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
G VY +G G LG G S+ LRP++++ L A + IS G H + ++
Sbjct: 634 GQVYAWG-CG-ACLGC---GSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVY 688
Query: 453 GFGDNERAQLGHDTLRGCL-EPTEI 476
+G+N Q G G + +P ++
Sbjct: 689 AWGNNSMGQCGQGNSTGPITKPKKV 713
Score = 287 (106.1 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 87/324 (26%), Positives = 150/324 (46%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4025 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLTVISALQGFVV 4082
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4083 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMS 4141
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4142 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4199
Query: 336 VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+A+ + G V+ +G G G LG G+ K+ P+ + L +V + + L G
Sbjct: 4200 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4259
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
VY FG +G P+ G + RP+ + L + ++ G HT+ + G ++ +
Sbjct: 4260 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4316
Query: 455 GDNERAQLGHDTLRGCLEPTEIFI 478
G N QLG EPT + +
Sbjct: 4317 GSNSEGQLGLGHTNHVREPTLVTV 4340
Score = 240 (89.5 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 71/231 (30%), Positives = 108/231 (46%)
Query: 237 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V+ G+ HGQL G + P + AP Q+ G + + NG V + G
Sbjct: 4000 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4054
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
GS LG G D I + + + S G D H +AL SG V++WG G G
Sbjct: 4055 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4114
Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LGHG+ + P + +L+ VQ+ C K V D G ++ FG +G LG +
Sbjct: 4115 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD-GKLFTFGNGDYGRLGLGN-- 4171
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
S+K L R+ +L + + Q++ GL HT+ V+ D ++ FGD + +LG
Sbjct: 4172 TSNKKLPERVT-ALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4221
Score = 158 (60.7 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 46/175 (26%), Positives = 83/175 (47%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSS-LCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
+++ G HT+ +S +V+S G G LGHG +T + + + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHG-DTNRVYKPKVVEALQGMFIRKVCAG 623
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ + +GQV+ G + CG + RP+L+E L ++ G +
Sbjct: 624 SQSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDISIGDSHVWLF 681
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 VMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 735
Score = 131 (51.2 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
VY WG G G L E + + P ++ A QV + TFV+ G+V G
Sbjct: 4000 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4056
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
+G LG +G SD + ++ +L+ V+Q+ T H++ +T+ G +F +GD +
Sbjct: 4057 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4113
Query: 461 QLGHDTLRGCLEPTEIFIQEMEE 483
+LGH P +I + EE
Sbjct: 4114 KLGHGNSDRQRRPRQIEALQGEE 4136
Score = 128 (50.1 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 106 IVETSAGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+VE G ++ G +L L S V++ G C LG G + I +A
Sbjct: 608 VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAA 665
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V +S ++H + +V+ G+NS CG ++ PI +P+ V L G+ +Q++
Sbjct: 666 TRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQIS 725
Query: 223 AG 224
AG
Sbjct: 726 AG 727
Score = 53 (23.7 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQLCALH 68
++ LP + ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL L
Sbjct: 1797 LQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQLKNLL 1854
Query: 69 SIYAGM 74
S AG+
Sbjct: 1855 S-QAGV 1859
Score = 43 (20.2 bits), Expect = 6.4e-11, Sum P(3) = 6.4e-11
Identities = 24/89 (26%), Positives = 35/89 (39%)
Query: 257 PTPKSIA-PLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
P P +IA PL E+G S+ QIA G + + + + H DE +P++
Sbjct: 2749 PPPPAIAVPLLEMGFSLRQIAKAME-ATGARGEADAQNITVLAMWMIEHPGHEDEEEPQS 2807
Query: 315 IQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
T R G V+ L S G
Sbjct: 2808 GSTADSRHGAAVLGSGGKSNEPCYLQSPG 2836
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 357 (130.7 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 102/337 (30%), Positives = 164/337 (48%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ LAV+ +G +
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSM 4207
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V++FG G LG G + P+ I GI + +V+ G + VAL G+VYT+G+
Sbjct: 4208 VWAFGDGDYGKLGLGNSTAKSSPQKIDVLC--GIGIKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
L G + P+ + L + V T L G VY +G G LG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
G ++ V P ++ L+ +V QIS G H+ T
Sbjct: 4326 ---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 356 (130.4 bits), Expect = 9.1e-30, P = 9.1e-30
Identities = 102/339 (30%), Positives = 165/339 (48%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+SFG G N LGHG+ + +P+ I+ + G+ + +V AG + +AL S+G VY WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQ--GMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 350 GYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G C LG G E P+ + L + V V L VY +G G G
Sbjct: 641 GAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Query: 409 FPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G S + +P+ + L + QIS G H++ T
Sbjct: 699 ---QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 321 (118.1 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 109/384 (28%), Positives = 179/384 (46%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+SD T A I TG ++ V+ GS+ L G T + + ++ PS
Sbjct: 347 ASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG--TQEKILQPKLA-PSF 402
Query: 163 AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQ 220
+ + A + + FV+ + G V CG S G D+N +L E + + K+
Sbjct: 403 SDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--KK 459
Query: 221 VTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IA 275
V++ G T G V + G +G+LGHG++ + PK I PL+ G VV ++
Sbjct: 460 VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCVS 517
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHT 573
Query: 336 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V+++G G G LGHGD P+ + +L+ +VCA + + L TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
VY +G G LG G S+ LRP++++ L A + +S G H + ++ ++
Sbjct: 634 QVYAWG-CG-ACLGC---GSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYA 688
Query: 454 FGDNERAQLGHDTLRGCL-EPTEI 476
+G+N Q G G + +P ++
Sbjct: 689 WGNNSMGQCGQGNSTGPITKPKKV 712
Score = 288 (106.4 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 87/320 (27%), Positives = 148/320 (46%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSD-DLHVLTVISALQGFVV 4081
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMS 4140
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198
Query: 336 VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+A+ + G V+ +G G G LG G+ K+ P+ + L +V + + L G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
VY FG +G P+ G + RP+ + L + ++ G HT+ + G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315
Query: 455 GDNERAQLGHDTLRGCLEPT 474
G N QLG EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335
Score = 285 (105.4 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 78/261 (29%), Positives = 126/261 (48%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAA 276
+QV G N T + G V CG ++G+LG G++ D I+ L+ V +V
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4089
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
+ +A+T +G V+S+G G LGHG + +PR I+ + G VV++S G +H
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQ--GEEVVQMSCGFKHSA 4147
Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS 395
+ S G ++T+G G G LG G+ +K LPE +++L+ + QV C V D
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4207
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
V+ FG +G LG G S P+ +D L + +++ G +V +T G ++ FG
Sbjct: 4208 VWAFGDGDYGKLGL---GNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 456 DNERAQLGHDTLRGCLEPTEI 476
+ L R P +I
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQI 4285
Score = 240 (89.5 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 71/231 (30%), Positives = 108/231 (46%)
Query: 237 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V+ G+ HGQL G + P + AP Q+ G + + NG V + G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
GS LG G D I + + + S G D H +AL SG V++WG G G
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LGHG+ + P + +L+ VQ+ C K V D G ++ FG +G LG +
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD-GKLFTFGNGDYGRLGLGN-- 4170
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
S+K L R+ +L + + Q++ GL HT+ V+ D ++ FGD + +LG
Sbjct: 4171 TSNKKLPERVT-ALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 162 (62.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 49/174 (28%), Positives = 84/174 (48%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L V+ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDVSIGDSHCLALS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 734
Score = 131 (51.2 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
VY WG G G L E + + P ++ A QV + TFV+ G+V G
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
+G LG +G SD + ++ +L+ V+Q+ T H++ +T+ G +F +GD +
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 461 QLGHDTLRGCLEPTEIFIQEMEE 483
+LGH P +I + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135
Score = 127 (49.8 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 106 IVETSAGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
++E G ++ G +L L S V++ G C LG G + I +A
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAA 664
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V VS ++H + +V+ G+NS CG ++ PI +P+ V L G+ +Q++
Sbjct: 665 TRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQIS 724
Query: 223 AG 224
AG
Sbjct: 725 AG 726
Score = 52 (23.4 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQL 64
++ LP + ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL
Sbjct: 1796 LQLLPKTGVSQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQL 1849
Score = 42 (19.8 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 24/89 (26%), Positives = 35/89 (39%)
Query: 257 PTPKSIA-PLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
P P +IA PL E+G S+ QIA G + + + + H DE +P++
Sbjct: 2748 PPPPAIAVPLLEMGFSLRQIAKAME-ATGARGEADAQNITVLAMWMIEHPGHEDEEEPQS 2806
Query: 315 IQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
T R G V+ L S G
Sbjct: 2807 GSTADSRPGAAVLGSGGKSNDPCYLQSPG 2835
Score = 40 (19.1 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFL 231
P++V++L + C Q+ L+ TG L
Sbjct: 1835 PKVVQSLLDLLCSQLKNLLSQTGVL 1859
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 357 (130.7 bits), Expect = 7.4e-31, P = 7.4e-31
Identities = 108/336 (32%), Positives = 154/336 (45%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F + V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
GH + RP V AL V+ G T L +G V+ G T GQLG T
Sbjct: 65 QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121
Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
+ P++I L E+ +VQ+A G + LA++ V+S+G LG G E +
Sbjct: 122 EECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
P I++ GI +++AG H L SG ++ WG+ G LG D+ D+ +P L S
Sbjct: 181 PHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKS 238
Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
L++ V +C + T L G V+ FG G+G LG S ++ PR + L
Sbjct: 239 LRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEI-NPRKVFELMGSL 295
Query: 432 VSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 466
V+QI+ G HT V GR++ FG QLG T
Sbjct: 296 VTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331
Score = 332 (121.9 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 95/295 (32%), Positives = 144/295 (48%)
Query: 187 CGDNSSFC-CGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
C N+SF G + I PR + + V GL T F+ G V+TCG N
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-H 303
GQLGH R P+ + L+ ++V ++ G ++ LA+ G VY++G ++ LG
Sbjct: 63 LGQLGHEKA--RKRPEHVGALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
G + PR I++ I +V+V+ G H +AL V++WG+ G LG G E K
Sbjct: 120 GTEECIRVPRNIKSLSE--IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177
Query: 364 -TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
P + SL Q+ A +FVL +G+++G+G FG LG D +D+ + P
Sbjct: 178 QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PT 234
Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
+L SLR V I G HT +T G +F FG QLGH++ + P ++F
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 297 (109.6 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 84/293 (28%), Positives = 135/293 (46%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + + A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKRP---EHVGALDAQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G + G T I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
+ G N +GQLG G + + +P I L + QIAAG ++ +T +G ++ +G
Sbjct: 159 FSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
LG + +D P +++ R + VV + G++H AL G V+T+G G G LG
Sbjct: 218 KFGQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
H + P + L L Q+ C R+ T + +G +Y FG G G LG
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 292 (107.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 79/254 (31%), Positives = 124/254 (48%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
++ G HTL +++ V++ G + G LG P T +C+ R I S +VQV+
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ + + +VF+ G N G + P ++++L G+P Q+ AG + LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G + G N GQLG D DR P + L VV I G + A+T G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
G+G LGH E+ PR + F G V +++ G +H A + SSG +Y++G G
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324
Query: 353 GALGHGDEIDKTLP 366
G LG G ++ P
Sbjct: 325 GQLGTGTTSNRKSP 338
Score = 218 (81.8 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 67/206 (32%), Positives = 97/206 (47%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S S VFS G + G LG G E + S I Q++A
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V QI G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 168 (64.2 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 58/219 (26%), Positives = 102/219 (46%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL ++ Q+ C HS+ +S+ ++ + N + L + ++S ++
Sbjct: 128 PRNIKSLSEIQIVQVACGYYHSL--ALSKGSEVFSWGQ-NKYGQLGLGYEYKKQNSPHVI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G QI G H+ +++ S ++F G + G LG + + V T +
Sbjct: 185 KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVP-TLLKSLRTQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
VV + E+H A + + G VFT G GH T+ I PR V L G Q+T G
Sbjct: 244 VVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSLVTQITCG 302
Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 353 (129.3 bits), Expect = 5.7e-30, P = 5.7e-30
Identities = 101/339 (29%), Positives = 165/339 (48%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+SFG G N LGHG+ + +P+ I+ + G+ + +V AG + +AL S+G VY WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQ--GMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 350 GYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G C LG G E P+ + L + V + L VY +G G G
Sbjct: 641 GAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698
Query: 409 FPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G S + +P+ + L + QIS G H++ T
Sbjct: 699 ---QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Score = 320 (117.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 110/384 (28%), Positives = 179/384 (46%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+SD T A I TG ++ V+ GS+ L G T + + ++ PS
Sbjct: 347 ASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG--TQEKILQPKLA-PSF 402
Query: 163 AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQ 220
+ + A + + FV+ + G V CG S G D+N +L E + + K+
Sbjct: 403 SDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--KK 459
Query: 221 VTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IA 275
V++ G T G V + G +G+LGHG++ + PK I PL+ G VV ++
Sbjct: 460 VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCVS 517
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHT 573
Query: 336 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V+++G G G LGHGD P+ + +L+ +VCA + + L TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
VY +G G LG G S+ LRP++++ L A + IS G H + ++ ++
Sbjct: 634 QVYAWG-CG-ACLGC---GSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYA 688
Query: 454 FGDNERAQLGHDTLRGCL-EPTEI 476
+G+N Q G G + +P ++
Sbjct: 689 WGNNSMGQCGQGNSTGPITKPKKV 712
Score = 161 (61.7 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L ++ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDISIGDSHCLSLS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
V+ G+N+ GQ G G++ T PK ++ L+ + ++ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGI-AIQQISAGTSHSLAWT 734
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 106 IVETSAGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
++E G ++ G +L L S V++ G C LG G + I +A
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAA 664
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V +S ++H + +V+ G+NS CG ++ PI +P+ V L G+ +Q++
Sbjct: 665 TRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQIS 724
Query: 223 AG 224
AG
Sbjct: 725 AG 726
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 352 (129.0 bits), Expect = 6.3e-30, P = 6.3e-30
Identities = 97/287 (33%), Positives = 147/287 (51%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ P++ + K+V G + + FL G V+TCG NT GQLGH ++P + I
Sbjct: 22 VAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--EQIG 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
L + +V +A G S+ LA++ G ++S+G+GS+ LG + + PR IQ ++
Sbjct: 80 ALADE-HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQT 138
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVC 381
I ++VS G+ H +AL + G +TWGK G LG G E + P+ + SL+ QV
Sbjct: 139 I--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 196
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
A +F L +G+V+G+G G LG D D+ P + LRA V IS G H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMNNAGQLGLSDE--EDRE-SPCHVKLLRAQKVVYISCGEEH 253
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
T V+T G +F FG QLGHD++ + P + E T +A
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA 300
Score = 350 (128.3 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 99/323 (30%), Positives = 164/323 (50%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
F S V +V+ +H+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADEH 85
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
V G + + L+ RG + + G+ + GQLG T + P+ I L + +++Q++
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQ-TILQVSC 144
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA+ +G +++G S+ LG G++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
AL SG V+ WG G LG DE D+ P + L++ V + + T VL +G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGG 262
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
V+ FG G LG ++D+V R+L+ L V+QI+ G HT+ V G ++ F
Sbjct: 263 VFTFGAGSCGQLGHDS--MNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 455 GDNERAQLG--HDTLRGCLEPTE 475
G R QLG H C P +
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342
Score = 349 (127.9 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 96/325 (29%), Positives = 154/325 (47%)
Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
++ G H++ L+ + V++CG + G LGH E + +I + H+V V+ E+
Sbjct: 38 EVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADEHIVHVACGES 94
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ + GQ+F+ G S G T + PRL++ L QV+ G L
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154
Query: 234 RGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G T G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ +G V+
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFG 213
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
+G + LG ++ D P ++ R + VV +S G+EH L SG V+T+G G C
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRAQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPD 411
G LGH D+ P + L Q+ ++ T V +G +Y FG G LG
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG--- 328
Query: 412 RGVSDKVLRPRILDSLRAHHVSQIS 436
G + V P + A H Q+S
Sbjct: 329 TGHTCNVKCPSPVKGYWAAHSGQLS 353
Score = 298 (110.0 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 87/273 (31%), Positives = 132/273 (48%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG T + V+ R I + ++QVS
Sbjct: 87 VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEESVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-AQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
G LG G + P P+ + + Q+ AR
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSAR 355
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 356 (130.4 bits), Expect = 9.1e-30, P = 9.1e-30
Identities = 101/339 (29%), Positives = 165/339 (48%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
I G+Y T +IS + SV +CG G LG G Q + ++ F + +VS+S
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGF 230
+ H G+VF+ GD GH +++ + P+L++ L+G V+AG +
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G ++T G G+LGHGD+ R P + + VG +++ G S+ +A++ +G
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+SFG G N LGHG+ + +P+ I+ + G+ + +V AG + +AL S+G VY WG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQ--GMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 350 GYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G C LG G E P+ + L + V + L VY +G G G
Sbjct: 641 GAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Query: 409 FPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G S + +P+ + L + QIS G H++ T
Sbjct: 699 ---QGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWT 734
Score = 342 (125.4 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 99/339 (29%), Positives = 165/339 (48%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4031 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
+T G + T G+ +G+LG G+T ++ P+ + LE + Q+A G ++ +AV+ +G +
Sbjct: 4149 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTVAVSTDGSM 4207
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V++FG G LG G + P+ + GI + +V+ G + VAL G+VYT+G+
Sbjct: 4208 VWAFGDGDYGKLGLGNSTAKSSPQKVDILC--GIGIKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 350 GYCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
+G G + P+ + L + T L TG VY +G G L
Sbjct: 4266 VSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4325
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
G G ++ V P ++ L+ ++ QIS G H+ T
Sbjct: 4326 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4361
Score = 322 (118.4 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 110/384 (28%), Positives = 179/384 (46%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
+SD T A I TG ++ V+ GS+ L G T + + ++ PS
Sbjct: 347 ASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG--TQEKILQPKLA-PSF 402
Query: 163 AHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV-EALKGVPCKQ 220
+ + A + + FV+ + G V CG S G D+N +L E + + K+
Sbjct: 403 SDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI--KK 459
Query: 221 VTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IA 275
V++ G T G V + G +G+LGHG++ + PK I PL+ G VV ++
Sbjct: 460 VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ--GKVVVCVS 517
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + AVT +G +Y++G G LGHG+ + P ++ G VS G H
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHT 573
Query: 336 VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V+++G G G LGHGD P+ + +L+ +VCA + + L TG
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTG 633
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
VY +G G LG G S+ LRP++++ L A + IS G H + ++ ++
Sbjct: 634 QVYAWG-CG-ACLGC---GSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYA 688
Query: 454 FGDNERAQLGHDTLRGCL-EPTEI 476
+G+N Q G G + +P ++
Sbjct: 689 WGNNSMGQCGQGNSTGPITKPKKV 712
Score = 305 (112.4 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 97/352 (27%), Positives = 161/352 (45%)
Query: 134 CGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDN 190
C L G HG E + V + PS + QV +N FV+Q+ G V CG+
Sbjct: 3997 CDVYLWGAGRHGQLAEAGRNV-MVPVAAPSFSQAQQVVCGQN-CTFVIQANGTVLACGEG 4054
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQ 247
S G +++ + ++ AL+G Q+ G LT G V + G +G+
Sbjct: 4055 SYGRLGQGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
LGHG++ + P+ I L+ VVQ++ G + VT +G +++FG+G LG G
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGE-EVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTS 4172
Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLP 366
++ P + +G + +V+ G H VA+ + G V+ +G G G LG G+ K+ P
Sbjct: 4173 NKKLPERVTAL--EGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSP 4230
Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
+ + L +V + + L G VY FG + +G P+ G + RP+ +
Sbjct: 4231 QKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPE-GRARNHNRPQQVPV 4289
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
L + I+ G HT+ ++ G ++ +G N QLG EPT I +
Sbjct: 4290 LSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4341
Score = 278 (102.9 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 93/330 (28%), Positives = 154/330 (46%)
Query: 44 GSHGLYPQKFRS-LVDLAASQLCALHSIYAGMSRNVQIEL---LNRCN-GNWKRVLRFLQ 98
G HG + R+ +V +AA + G + I+ + C G++ R+ +
Sbjct: 4005 GRHGQLAEAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNS 4064
Query: 99 SVEHSSDIVETSAGNM--QITTG---RYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
H ++ G + Q+ T H++ ++ S VFS G G LGHG Q
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRR 4124
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVE 211
+I VVQ+S H+A V G++FT G+ G +T N+ + P V
Sbjct: 4125 P-RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PERVT 4181
Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
AL+G QV GLN T ++ G V G +G+LG G++ + +P+ + L +G
Sbjct: 4182 ALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIG- 4240
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRV 328
+ ++A G + +A+T +G VY+FG S+ +G G + +P+ + G+ + +
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVL--SGVFIEDI 4298
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
+ G EH +AL S+G VY WG G LG G
Sbjct: 4299 AVGAEHTLALSSTGDVYAWGSNSEGQLGLG 4328
Score = 182 (69.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 63/228 (27%), Positives = 105/228 (46%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G H+ +++ + +F+ G+ G LG G + + + R+ + QV+
Sbjct: 4137 VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP-ERVTALEGYQIGQVACGL 4195
Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH V G V+ GD G ++ P+ V+ L G+ K+V G F+ L
Sbjct: 4196 NHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKS-SPQKVDILCGIGIKKVACGTQFSVAL 4254
Query: 232 TIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
T GHV+T G + +G G + P+ + L V + IA G + LA++ G
Sbjct: 4255 TKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGV-FIEDIAVGAEHTLALSSTGD 4313
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
VY++GS S LG G + +P I + K I ++SAG H A
Sbjct: 4314 VYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR--QISAGRCHSAA 4359
Score = 165 (63.1 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 50/174 (28%), Positives = 84/174 (48%)
Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HT+ +S +V+S G G LGHG +T + I + +V A
Sbjct: 565 EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + +GQV+ G + CG + RP+L+E L ++ G + L+
Sbjct: 624 QSSLALTSTGQVYAWGCGACLGCGSSEATA--LRPKLIEELAATRIVDISIGDSHCLALS 681
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
V+ G+N+ GQ G G++ T PK ++ L+ V S+ QI+AG S+ LA T
Sbjct: 682 HDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV-SIQQISAGTSHSLAWT 734
Score = 133 (51.9 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 41/143 (28%), Positives = 68/143 (47%)
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
VY WG G G L E + + P+++ A QV + TFV+ G+V G
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 4055
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
+G LG +G SD + ++ +L+ V+Q+ T H++ +T+ G +F +GD +
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 461 QLGHDTLRGCLEPTEIFIQEMEE 483
+LGH P +I + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135
Score = 127 (49.8 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 106 IVETSAGNM--QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
++E G ++ G +L L S V++ G C LG G + I +A
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAA 664
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V +S ++H + +V+ G+NS CG ++ PI +P+ V L GV +Q++
Sbjct: 665 TRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQIS 724
Query: 223 AG 224
AG
Sbjct: 725 AG 726
Score = 54 (24.1 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 10 IEELPSHLIFEILTSGRLSAVDLAH-LELTSKTFGGSHGLYPQKFRSLVDLAASQLCALH 68
++ LP I ++ T+ ++++ L L +T+ T+ L P+ +SL+DL SQL L
Sbjct: 1796 LQLLPKTGISQLSTALKVASTRLLQILAITTGTYADK--LSPKVVQSLLDLLCSQLKNLL 1853
Query: 69 SIYAGM 74
S AG+
Sbjct: 1854 S-QAGV 1858
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 23/90 (25%), Positives = 37/90 (41%)
Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
G +CG G G ++ L + + L V V + V + T S Y GW +
Sbjct: 3671 GIAWCGLPGKGSKLQLLLA---TGCHNGL-VCVWTVPQDIAVTLQTSSAYSEGWWDQETS 3726
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
G D G K + + + LR H ++ + T
Sbjct: 3727 G-QD-GYR-KAVEAKCVFQLRGH-ITPVRT 3752
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 351 (128.6 bits), Expect = 9.7e-30, P = 9.7e-30
Identities = 97/287 (33%), Positives = 146/287 (50%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ P++ + K+V G N + FL G V+TCG NT GQLGH ++P + I
Sbjct: 22 VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP--EQIG 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
L + +V +A G S+ LA++ G ++S+G+GS+ LG D + PR IQ ++
Sbjct: 80 ALADQ-HIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQT 138
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVC 381
I ++VS G+ H +AL + G +TWG+ G LG G E + P+ + SL+ QV
Sbjct: 139 I--LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV 196
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
A +F L +G+V+G+G G LG D D+ P + LR V IS G H
Sbjct: 197 AGGAHSFALSLSGAVFGWGMNNAGQLGLSDE--KDRE-SPCHVKLLRTQKVVYISCGEEH 253
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
T V+T G +F FG QLGHD++ + P + E T +A
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA 300
Score = 348 (127.6 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 103/343 (30%), Positives = 169/343 (49%)
Query: 140 GVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH- 197
G G P V+ ++ F S V +V+ NH+ F+L+ G+V+TCG N+ GH
Sbjct: 10 GQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE 69
Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR- 256
R+ N+P + AL V G + + L+ +G + + G+ + GQLG D
Sbjct: 70 REGNKP----EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSV 125
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAI 315
P+ I L + +++Q++ G + LA+ +G +++G S+ LG G++ + P+ +
Sbjct: 126 AVPRLIQKLNQQ-TILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRV 184
Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
++ +GI + +V AG H AL SG V+ WG G LG DE D+ P + L++
Sbjct: 185 RSL--EGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242
Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
V + + T VL +G V+ FG G LG ++D+V R+L+ L V+QI
Sbjct: 243 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS--MNDEVNPRRVLE-LMGSEVTQI 299
Query: 436 STGLYHTVV-VTDRGRLFGFGDNERAQLG--HDTLRGCLEPTE 475
+ G HT+ V G ++ FG R QLG H C P +
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 337 (123.7 bits), Expect = 7.9e-28, P = 7.9e-28
Identities = 93/320 (29%), Positives = 148/320 (46%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L+ + V++CG + G LGH E + +I + H+V V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
GQ+F+ G S G + PRL++ L QV+ G L G
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
T G N+HGQLG G + +P+ + LE + + Q+ AG ++ A++ +G V+ +G +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
LG ++ D P ++ R + VV +S G+EH L SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 416
D+ P + L Q+ ++ T V +G +Y FG G LG G +
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333
Query: 417 KVLRPRILDSLRAHHVSQIS 436
V P + A H Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353
Score = 290 (107.1 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 86/273 (31%), Positives = 130/273 (47%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG V+ R I + ++QVS
Sbjct: 87 VHVACGESHSLALSDQGQLFSWGAGSDGQLGL-MTIEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
G LG G + P P+ + + Q+ AR
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSAR 355
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 351 (128.6 bits), Expect = 9.9e-30, P = 9.9e-30
Identities = 107/333 (32%), Positives = 155/333 (46%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G E +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
P+ I++ GI ++V+AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
L+S V +C + T L G V+ FG G+G LG S ++ PR + L
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEI-NPRKVFELMGSI 295
Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
V+QI+ G HT V GR++ FG QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 349 (127.9 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 91/276 (32%), Positives = 142/276 (51%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
L+ ++V ++ G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
I +V+V+ G H +AL + V+ WG+ G LG G E K T P+ + SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 305 (112.4 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 82/293 (27%), Positives = 139/293 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G + T P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
LG +++D P +++ R + I V + G++H AL G V+T+G G G LG
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
H + P + L + Q+ C R+ + + +G +Y FG G G LG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 288 (106.4 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 84/274 (30%), Positives = 132/274 (48%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSSLCGVLG-HGPETTQCVSF 154
+S + +V A N+ ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304
Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 230 (86.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 68/206 (33%), Positives = 99/206 (48%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S +S VF G + G LG G E + S I +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V QIA G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 161 (61.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 57/219 (26%), Positives = 100/219 (45%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL D+ Q+ C HS+ +S+ ++ + N + L + S ++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSL--ALSKASEVFCWGQ-NKYGQLGLGIECQKQTSPQLI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G MQ+ G H+ +++ S ++F G + G LG E + V + +
Sbjct: 185 KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-NLLKSLRSQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V + E+H A + + G VFT G GH T+ I PR V L G Q+ G
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACG 302
Query: 225 LNFTG-FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 349 (127.9 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 91/276 (32%), Positives = 142/276 (51%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
L+ ++V +A G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
I +V+V+ G H +AL + V+ WG+ G LG G + K T P+ + SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 347 (127.2 bits), Expect = 3.7e-29, P = 3.7e-29
Identities = 105/333 (31%), Positives = 154/333 (46%)
Query: 135 GSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
GH + + +P V AL V G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G + +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
P+ I++ GI ++V+AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
L+S V +C + T L G V+ FG G+G LG S ++ PR + L
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEI-NPRKVFELMGSI 295
Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
V+Q++ G HT V GR++ FG QLG
Sbjct: 296 VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 305 (112.4 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 82/293 (27%), Positives = 140/293 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V V+ E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G D + +P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
LG +++D P +++ R + I V + G++H AL G V+T+G G G LG
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
H + P + L + QV C R+ + + +G +Y FG G G LG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 288 (106.4 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 85/274 (31%), Positives = 131/274 (47%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSSLCGVLG-HGPETTQCVSF 154
+S + +V A N+ + G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304
Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 226 (84.6 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 66/206 (32%), Positives = 99/206 (48%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S +S VF G + G LG G + + S I +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V Q+A G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 161 (61.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 58/219 (26%), Positives = 100/219 (45%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL D+ Q+ C HS+ +S+ ++ + N + L + S ++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSL--ALSKASEVFCWGQ-NKYGQLGLGIDCQKQTSPQLI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G MQ+ G H+ +++ S ++F G + G LG E + V + +
Sbjct: 185 KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-NLLKSLRSQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V + E+H A + + G VFT G GH T+ I PR V L G QV G
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQVACG 302
Query: 225 LNFTG-FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 345 (126.5 bits), Expect = 7.2e-29, P = 7.2e-29
Identities = 97/295 (32%), Positives = 149/295 (50%)
Query: 187 CGDNSSFC-CGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
C N+SF G + I PR + + V GL T F+ G V+TCG N
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
GQLGH + R P+ + L+ ++V ++ G ++ LA+ G VY++G S+ LG
Sbjct: 63 LGQLGHEKS--RKKPEQVVALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
G + PR I++ I +V+V+ G H +AL + V+ WG+ G LG G + K
Sbjct: 120 GSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 364 -TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
T P+ L SL +QV A +FVL +G+++G+G FG LG D +D+ + P
Sbjct: 178 QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PN 234
Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
+L SLR+ + I G HT +T G +F FG QLGH++ + P ++F
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 340 (124.7 bits), Expect = 3.3e-28, P = 3.3e-28
Identities = 104/333 (31%), Positives = 154/333 (46%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
P+ +++ GI ++V+AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
L+S V +C + T L G V+ FG G+G LG S ++ PR + L
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEI-NPRKVFELMGSI 295
Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
V++I+ G HT V GR++ FG QLG
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 298 (110.0 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 80/293 (27%), Positives = 139/293 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G D + +P+ + L + +Q+AAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
LG +++D P +++ R + I V + G++H AL G V+T+G G G LG
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
H + P + L + ++ C R+ + + +G +Y FG G G LG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 285 (105.4 bits), Expect = 9.4e-22, P = 9.4e-22
Identities = 84/274 (30%), Positives = 131/274 (47%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGH-GPETTQCVSF 154
+S + +V A N+ ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304
Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 225 (84.3 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 75/251 (29%), Positives = 121/251 (48%)
Query: 70 IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
+YA G+ + Q+ L+ G+ + +R ++++ SDI +Q+ G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLV----GS-EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154
Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+S VF G + G LG G + + S + +QV+A H+ + SG +F
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G N G D N + P L+++L+ + G + T LT G V T G+ +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
LGH T P+ + E +GS+V +IA G + A V +G +YSFG G N LG G
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 306 QHDELQPRAIQ 316
+ P ++
Sbjct: 332 TSNRKSPFTVK 342
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 343 (125.8 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 103/338 (30%), Positives = 159/338 (47%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
GSS G LG G + +V+ H+ F+L G V+TCG NS
Sbjct: 6 GSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNS--- 62
Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
CG ++ RP LV AL V+ G + + +G V G+ GQLG G
Sbjct: 63 CGQLGHDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAE 122
Query: 255 DRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 312
+ P+ I L E + Q+ G + +A++ +G ++ +G S+ LG G+ + L P
Sbjct: 123 EAVRVPRLIKKLCE-HRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSP 181
Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
+ +++ GI + ++SAG +H AL SG V+ WGK G LG DE D+ +P + L
Sbjct: 182 QPLKSLC--GIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFL 239
Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
+S V + + T L G ++ FG G LG ++ L R+++ L V
Sbjct: 240 RSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDS--TRNEPLPRRVME-LMGTEV 296
Query: 433 SQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRG 469
SQI+ G HT+ V G ++ FG N + QLG +RG
Sbjct: 297 SQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG-IRG 333
Score = 324 (119.1 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 98/319 (30%), Positives = 144/319 (45%)
Query: 101 EHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGH--GPETTQCVSFTRI 157
E S V G ++ G H+L L+ + SV++CGS+ CG LGH G + V
Sbjct: 24 EPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGAL-- 81
Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
A + VS + H+ V + GQVF G G + PRL++ L
Sbjct: 82 ---DAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR 138
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIA 275
QV G + L+ G + G N+ GQLG G P+ S PL+ + + QI+
Sbjct: 139 ISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGK--GEPSTLSPQPLKSLCGIPLTQIS 196
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
AG + A++ +G V+ +G S LG ++ D P I+ R + VV +S G+EH
Sbjct: 197 AGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ--KVVYISCGEEHT 254
Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTG 394
AL G ++T+G G G LGH ++ LP + L Q+ + T V TG
Sbjct: 255 AALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTG 314
Query: 395 SVYGFGWMGFGSLGFPDRG 413
+Y FG G LG RG
Sbjct: 315 LIYAFGCNTQGQLGTGIRG 333
Score = 282 (104.3 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 79/261 (30%), Positives = 127/261 (48%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
++ G+ H+L ++ VF+ G+ G LG G + V R+ H + QV +
Sbjct: 89 VSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT-AEEAVRVPRLIKKLCEHRISQVMCGNH 147
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H + + GQ+F G+NSS G P+ +++L G+P Q++AG + + L+
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSF 207
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V G N+ GQLG D DR P I L VV I+ G + A+T G +++F
Sbjct: 208 SGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ-KVVYISCGEEHTAALTKEGGLFTF 266
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
G+GS LGH +E PR + G V +++ G H +A + S+G +Y +G
Sbjct: 267 GNGSKGQLGHDSTRNEPLPRRVMELM--GTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQ 324
Query: 353 GALGHGDEIDKTLPEPLSSLK 373
G LG G P P+S+++
Sbjct: 325 GQLGTGIRGSAKSPVPVSNIQ 345
Score = 191 (72.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 57/157 (36%), Positives = 75/157 (47%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
QI+ G H+ +S S +VF G + G LG E + V I F + VV +S E
Sbjct: 194 QISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVP-CHIKFLRSQKVVYISCGEE 252
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
H A + + G +FT G+ S GH T N P+ PR V L G Q+ G N T F+
Sbjct: 253 HTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL--PRRVMELMGTEVSQIACGRNHTLAFV 310
Query: 232 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKS-IAPL 265
G ++ G NT GQLG G + P P S I PL
Sbjct: 311 PSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPL 347
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 341 (125.1 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 105/333 (31%), Positives = 155/333 (46%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G + +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
P+ I++ GI ++V+AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
L++ V +C + T L G V+ FG G+G LG S ++ PR + L
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEI-NPRKVFELMGSI 295
Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
V+QI+ G HT V GR++ FG QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 336 (123.3 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 95/295 (32%), Positives = 147/295 (49%)
Query: 187 CGDNSSFC-CGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
C N+SF G + I PR + + V GL T F+ G V+TCG N
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
GQLGH + R P+ + L+ ++V ++ G ++ LA+ G VY++G S+ LG
Sbjct: 63 LGQLGHEKS--RKKPEQVVALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
G + PR I++ I +V+V+ G H +AL + V+ WG+ G LG G + K
Sbjct: 120 GSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 364 TL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
P+ + SL +QV A +FVL +G+++G+G FG LG D +D+ + P
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PN 234
Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
+L SLR + I G HT +T G +F FG QLGH++ + P ++F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 304 (112.1 bits), Expect = 6.4e-24, P = 6.4e-24
Identities = 82/293 (27%), Positives = 139/293 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G D + +P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
LG +++D P +++ R + I V + G++H AL G V+T+G G G LG
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
H + P + L + Q+ C R+ + + +G +Y FG G G LG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 286 (105.7 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 84/274 (30%), Positives = 132/274 (48%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGH-GPETTQCVSF 154
+S + +V A N+ ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304
Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 229 (85.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 78/251 (31%), Positives = 121/251 (48%)
Query: 70 IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
+YA G+ + Q+ LL G+ + +R ++++ SDI +Q+ G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLL----GS-EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154
Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+S VF G + G LG G + + S I +QV+A H+ + SG +F
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G N G D N + P L+++L+ + G + T LT G V T G+ +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
LGH T P+ + E +GS+V QIA G + A V +G +YSFG G N LG G
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 306 QHDELQPRAIQ 316
+ P ++
Sbjct: 332 TSNRKSPFTVK 342
Score = 159 (61.0 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL D+ Q+ C HS+ +S+ ++ + N + L + S ++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSL--ALSKASEVFCWGQ-NKYGQLGLGIDCKKQASPQLI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G MQ+ G H+ +++ S ++F G + G LG E + V +
Sbjct: 185 KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-NLLKSLRTQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V + E+H A + + G VFT G GH T+ I PR V L G Q+ G
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACG 302
Query: 225 LNFTG-FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 341 (125.1 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 105/333 (31%), Positives = 155/333 (46%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G + +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
P+ I++ GI ++V+AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
L++ V +C + T L G V+ FG G+G LG S ++ PR + L
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEI-NPRKVFELMGSI 295
Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
V+QI+ G HT V GR++ FG QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 336 (123.3 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 95/295 (32%), Positives = 147/295 (49%)
Query: 187 CGDNSSFC-CGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
C N+SF G + I PR + + V GL T F+ G V+TCG N
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
GQLGH + R P+ + L+ ++V ++ G ++ LA+ G VY++G S+ LG
Sbjct: 63 LGQLGHEKS--RKKPEQVVALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
G + PR I++ I +V+V+ G H +AL + V+ WG+ G LG G + K
Sbjct: 120 GSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 364 TL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
P+ + SL +QV A +FVL +G+++G+G FG LG D +D+ + P
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PN 234
Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
+L SLR + I G HT +T G +F FG QLGH++ + P ++F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 304 (112.1 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 82/293 (27%), Positives = 139/293 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G D + +P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
LG +++D P +++ R + I V + G++H AL G V+T+G G G LG
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
H + P + L + Q+ C R+ + + +G +Y FG G G LG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 286 (105.7 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 84/274 (30%), Positives = 132/274 (48%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGH-GPETTQCVSF 154
+S + +V A N+ ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304
Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 229 (85.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 78/251 (31%), Positives = 121/251 (48%)
Query: 70 IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
+YA G+ + Q+ LL G+ + +R ++++ SDI +Q+ G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLL----GS-EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154
Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+S VF G + G LG G + + S I +QV+A H+ + SG +F
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G N G D N + P L+++L+ + G + T LT G V T G+ +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
LGH T P+ + E +GS+V QIA G + A V +G +YSFG G N LG G
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 306 QHDELQPRAIQ 316
+ P ++
Sbjct: 332 TSNRKSPFTVK 342
Score = 159 (61.0 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL D+ Q+ C HS+ +S+ ++ + N + L + S ++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSL--ALSKASEVFCWGQ-NKYGQLGLGIDCKKQASPQLI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G MQ+ G H+ +++ S ++F G + G LG E + V +
Sbjct: 185 KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-NLLKSLRTQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V + E+H A + + G VFT G GH T+ I PR V L G Q+ G
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACG 302
Query: 225 LNFTG-FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 352 (129.0 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 101/337 (29%), Positives = 160/337 (47%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQ---V 168
+ I G ++S + V++CG G LG G T V P +VV+ V
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPH-QLPVLRQYVVKKVAV 3078
Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
+ HA + G+VF+ G+ GH + + +PRLVEAL+ + V G + +
Sbjct: 3079 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT-LDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
++ +G ++T G +G+LGHGD + PK + L VVQ+A G + LA+T
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG-RRVVQVACGSRDAQTLALTE 3196
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
+G V+S+G G LG G P I+ R GI VV++ G + +AL +G V+T
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3254
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
WGKG LGHG + P+P+ L+ + V + D G VY +G G
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314
Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
G + V+ K P ++ L A V++++ G H++
Sbjct: 3315 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSI 3348
Score = 352 (129.0 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 101/347 (29%), Positives = 162/347 (46%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
S+++ G + G LG G E ++ + T S VQ++ E V G++F G
Sbjct: 4049 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4107
Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHG 246
S G ++ P L+ +L+ V K+V +G LT G V+ G G
Sbjct: 4108 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
+LGHG+ + PK + L + SV IA G ++ A+T +G V ++G G LGHG+
Sbjct: 4167 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4225
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
D+L+P+ ++ + +GD + + V++WG G G LG G LP
Sbjct: 4226 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4285
Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
+ SL V+V + + L +G+VY +G F LG G D V RP+ + +
Sbjct: 4286 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4342
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ + I+TG H V +D G ++ +GDN+ QLG T+ P
Sbjct: 4343 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4389
Score = 351 (128.6 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 99/340 (29%), Positives = 161/340 (47%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQV 168
+Q+ G ++ + +F+ G G LG G + + T + S HV V V
Sbjct: 4085 VQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIP-TLLG--SLQHVFVKKVAV 4141
Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNF 227
++ H + G+V+ G+ GH NR + RP+LVE L G+ + G
Sbjct: 4142 NSGGKHCLALTTEGEVYAWGEGEDGKLGHG--NRMSYDRPKLVEHLNGMSVADIACGSAH 4199
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTG 286
+ +T GHV T G +G+LGHGD+ D+ PK + L ++ + +G + L +T
Sbjct: 4200 SAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITD 4259
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
+ V+S+G G LG G P I++ G+ VV+V G + VAL SG VYT
Sbjct: 4260 DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLA--GLGVVKVECGSQFSVALTKSGAVYT 4317
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
WGKG LGHG P+ +++L+ + + D+G VY +G G
Sbjct: 4318 WGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQ 4377
Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
LG D G + RPR++ +L+ H+ +++ G HT+ ++
Sbjct: 4378 LG--D-GTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 329 (120.9 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 81/233 (34%), Positives = 124/233 (53%)
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V+ CG T+G+LG G T + P P + L + V V + +G + LA+T +G V+S+
Sbjct: 3038 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSW 3097
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G G + LGHG + +PR ++ R K I V+ G H A+ S G +YTWG G G
Sbjct: 3098 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIR--DVACGSSHSAAISSQGELYTWGLGEYG 3155
Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQV-C-ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
LGHGD + P+ +++L VQV C +R +T L + G+V+ +G FG LG
Sbjct: 3156 RLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG--- 3212
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
RG S+ P ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 3213 RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3265
Score = 325 (119.5 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 88/305 (28%), Positives = 144/305 (47%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT-- 222
+ ++ V Q G+V+ CG+ ++ G T N P+ P + L+ K+V
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLRQYVVKKVAVH 3079
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
+G LT+ G V + G G+LGHG+ TLD+P + + L + +A G S+
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKP--RLVEALR-AKKIRDVACGSSH 3136
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVAL 338
A++ G +Y++G G LGHG+ +L+P+ + G VV+V+ G D +AL
Sbjct: 3137 SAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALA--GRRVVQVACGSRDAQTLAL 3194
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
G V++WG G G LG G P + L VQ+ + + L G V+
Sbjct: 3195 TEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWT 3254
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
+G + LG G V +P+ + LR V ++ G H + VTD G+++ +GDN+
Sbjct: 3255 WGKGDYYRLG---HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3311
Query: 459 RAQLG 463
Q G
Sbjct: 3312 HGQQG 3316
Score = 300 (110.7 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 84/296 (28%), Positives = 143/296 (48%)
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
++ G N G + +R I P EAL + Q+ G +T G + G
Sbjct: 4051 IYGWGHNHRGQLGGLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4109
Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
+ G+LG G + P + L+ V V + +G + LA+T G VY++G G + LG
Sbjct: 4110 SGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG 4169
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
HG + +P+ ++ G+ V ++ G H A+ +SG+V TWGKG G LGHGD D
Sbjct: 4170 HGNRMSYDRPKLVEHLN--GMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 4227
Query: 363 KTLPEPLSSLKSHLAVQV-CAR-KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
+ P+ + +L + A+ + C +T + D +V+ +G +G LG RG SD
Sbjct: 4228 QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG---RGGSDGCKL 4284
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
P ++SL V ++ G +V +T G ++ +G + +LGH ++ P ++
Sbjct: 4285 PYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKV 4340
Score = 274 (101.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 88/295 (29%), Positives = 144/295 (48%)
Query: 163 AHVVQVSASEN----HAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVP 217
AH V +S + + H + + ++ G GH DT+ R + P + AL+
Sbjct: 612 AHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV--PTKIAALEQHC 669
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAA 276
+ V G +++ +T G++ T G T+ +LGHG++ DR P + L + V V + +
Sbjct: 670 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 729
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G ++ LA+T G+V+++G G LG+G + LQP +++ R V RV AG + V
Sbjct: 730 GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR----VQRVFAGSQFSV 785
Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTL-----PEPLSSLKSHLAVQVCARKRKTFVLV 391
AL S G +YTWGK C LGH +++++ P +SSL+ V V L
Sbjct: 786 ALSSEGQLYTWGKATC--LGH-QLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALS 842
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+G V+G+G + P S+ +LR IL SL S I+ ++V T
Sbjct: 843 SSGEVFGWGRNDSQQI-CPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWT 896
Score = 253 (94.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 70/241 (29%), Positives = 114/241 (47%)
Query: 241 GSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
G N QLG G + PT ++I+ L + IA G + V+ +G VY+ G G+
Sbjct: 2992 GLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
N LG G H+ P + R+ + V V +G +H +AL G V++WG+G G LGH
Sbjct: 3048 NGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3107
Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
G+ P + +L++ V + + G +Y +G +G LG D
Sbjct: 3108 GNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ-- 3165
Query: 418 VLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
L+P+++ +L V Q++ G T+ +T+ G +F +GD + +LG G P E
Sbjct: 3166 -LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHE 3224
Query: 476 I 476
I
Sbjct: 3225 I 3225
Score = 251 (93.4 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 70/235 (29%), Positives = 111/235 (47%)
Query: 230 FLTI-RGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
FL I H ++ G+ +LGHGDT R P IA LE+ V + G SY A+T
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
G + ++G G+ LGHG D P + + V + +GD H +AL S G V+ W
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746
Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
G G G LG+G+ P + SL +V A + + L G +Y +G
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSVALSSEGQLYTWGKATCLGH 804
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
+R V + PR++ SL+ + ++ + H + ++ G +FG+G N+ Q+
Sbjct: 805 QLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 194 (73.4 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 75/261 (28%), Positives = 122/261 (46%)
Query: 97 LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
++ V H D+ + AG+ + GR+ + SN + +S G+ LGHG + V T+
Sbjct: 608 MEEVAH--DVFISIAGHCE---GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP-TK 661
Query: 157 INFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALK 214
I H VQ V +++A + G + T G + GH +++ R + P LV AL
Sbjct: 662 IA-ALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSL--PTLVVALS 718
Query: 215 GVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
V G + LT G V G +G+LG+G+ P + E + V
Sbjct: 719 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILV---ESLPRVQ 775
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRV 328
++ AG + +A++ G +Y++G + CLGH +Q PR + + + K I V V
Sbjct: 776 RVFAGSQFSVALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAV 833
Query: 329 SAGDEHVVALDSSGYVYTWGK 349
S H +AL SSG V+ WG+
Sbjct: 834 SVA--HCLALSSSGEVFGWGR 852
Score = 190 (71.9 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 62/228 (27%), Positives = 97/228 (42%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASEN 173
I G H+ I+ S V + G G LGHG Q A + + +
Sbjct: 4193 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDA 4252
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+ V++ GD G R + P +E+L G+ +V G F+ LT
Sbjct: 4253 QTLCITDDDNVWSWGDGDYGKLG-RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK 4311
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V+T G +LGHG PK +A L+ ++ IA G + +A + +G VY++
Sbjct: 4312 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGK-KIISIATGSLHCVACSDSGEVYTW 4370
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
G LG G +PR + + K H+V+V+ G H +AL +S
Sbjct: 4371 GDNDEGQLGDGTVTAIQRPRLVAALQGK--HIVKVTCGSAHTLALSTS 4416
Score = 165 (63.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 40/142 (28%), Positives = 70/142 (49%)
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
H +A+DS+ Y+WG G LGHGD + +P +++L+ H V + +
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 686
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRL 451
G++ +G + LG G SD P ++ +L H V ++ G H++ +T G +
Sbjct: 687 GNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 743
Query: 452 FGFGDNERAQLGHDTLRGCLEP 473
F +GD + +LG+ G L+P
Sbjct: 744 FAWGDGDYGKLGNGNCNGSLQP 765
Score = 140 (54.3 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
D+ ++ + +Y WG + G LG G I KT P P +L VQ+ ++ F
Sbjct: 4039 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRI-KT-PTPCEALSLLRPVQLAGGEQSLFA 4096
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD 447
+ G ++ G+ G LG G SD P +L SL+ V +++ +G H + +T
Sbjct: 4097 VTPDGKLFATGYGSGGRLGV---GGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153
Query: 448 RGRLFGFGDNERAQLGH 464
G ++ +G+ E +LGH
Sbjct: 4154 EGEVYAWGEGEDGKLGH 4170
Score = 108 (43.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 344 VYTWG---KGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
V WG K G L G ++ T + +S L+ + + + F++ G VY
Sbjct: 2988 VMVWGLNDKEQLGGL-KGSKVKVPTFSQTISRLRP---IHIAGGSKSLFIVSQDGKVYAC 3043
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
G G LG GV+ V P L LR + V +++ +G H + +T G++F +G+
Sbjct: 3044 GEGTNGRLGL---GVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEG 3100
Query: 458 ERAQLGH 464
E +LGH
Sbjct: 3101 EDGKLGH 3107
Score = 42 (19.8 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 359 DEIDKTLPEPLSSLKS--HLAVQVCARKRKTFVLVDTGSVY-GF 399
D + K +P PL SL S L VC L+ + + Y GF
Sbjct: 4740 DGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYKGF 4783
Score = 38 (18.4 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 37 LTSKTFGGSHGLYPQKFRSLVDLAASQLC----ALHSIYAGMSRNVQIEL 82
L + G L P + +VD A C A ++Y M R Q+ L
Sbjct: 1686 LNERQIHGEGELDPALMQDIVDFALQDSCDVETARRAMYCQMQR-YQLRL 1734
Score = 37 (18.1 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 13/57 (22%), Positives = 20/57 (35%)
Query: 164 HVVQVS--ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
H++Q S A + GQ+ GD+ CG + +P L C
Sbjct: 104 HLIQDCELVSSPTAPLLNARGQLSYLGDDGKHYCGAQQLKCSCCQPEYCGPLSACNC 160
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 340 (124.7 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 92/265 (34%), Positives = 131/265 (49%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKS 261
P+ R R+ L GV +Q +G + L G VH+CG N GQLG G +
Sbjct: 12 PVSRRRV--GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKER 69
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRR 320
I LE + V ++ G + LAV G V+++G+GS LG GE + L P I+T
Sbjct: 70 IRALETL-HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN- 127
Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQ 379
I + +VS G H +AL G V++WG G LG G + + P+ + SL Q
Sbjct: 128 -DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQ 186
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
V A +F L +G+ +G+G G L VS + +P + +L+ V IS G
Sbjct: 187 VAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGY 246
Query: 440 YHTVVVTDRGRLFGFGDNERAQLGH 464
HTVV+T G++F FGDN QLGH
Sbjct: 247 EHTVVLTQNGKVFTFGDNTYGQLGH 271
Score = 302 (111.4 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 91/320 (28%), Positives = 153/320 (47%)
Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
L GP VS R+ + Q ++ E H+ +L +GQV +CGDN G R
Sbjct: 3 LSWGPGPRGPVSRRRVGL-GGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAP 61
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PK 260
+ AL+ + V+ G + + +G V G+ + GQLG G+ + P
Sbjct: 62 CSAQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPM 121
Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFR 319
I L ++ + Q++ G + LA++ G V+S+GS S+ LG G++ + P+ +++
Sbjct: 122 KIKTLNDI-KIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSL- 179
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEP--LSSLKSHL 376
GI + +V+AG H AL SG + WG+ G L H + + +P +S+LK+
Sbjct: 180 -DGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLG 238
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
+ + T VL G V+ FG +G LG ++K P++++ + VSQI
Sbjct: 239 VIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSP--TAEKS-GPQLVEGIDGL-VSQID 294
Query: 437 TGLYHTVV-VTDRGRLFGFG 455
G YHT+ V G++ FG
Sbjct: 295 CGSYHTLAYVYTTGKVVSFG 314
Score = 278 (102.9 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 88/295 (29%), Positives = 132/295 (44%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q +G H+LL+ SN V SCG + G LG RI HV VS +
Sbjct: 27 QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVSCGKE 86
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ V G+VF G S G + P ++ L + KQV+ G + L+
Sbjct: 87 HSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSE 146
Query: 234 RGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V + GSN+ GQLG G + +P+ + L+ + + Q+AAG ++ A++ +G S
Sbjct: 147 GGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGI-PLAQVAAGGAHSFALSLSGT--S 203
Query: 293 FGSGSNFCLGHGEQH------DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
FG G N G H +P +I + G V+ +S G EH V L +G V+T
Sbjct: 204 FGWGRNNA-GQLALHKNNVSGQSYKPYSISALKNLG--VIYISCGYEHTVVLTQNGKVFT 260
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFG 400
+G G LGH +K+ P+ + + L Q+ C + TG V FG
Sbjct: 261 FGDNTYGQLGHSPTAEKSGPQLVEGIDG-LVSQIDCGSYHTLAYVYTTGKVVSFG 314
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 340 (124.7 bits), Expect = 3.3e-28, P = 3.3e-28
Identities = 104/333 (31%), Positives = 155/333 (46%)
Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G + +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
P+ I++ GI ++++AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
L++ V +C + T L G V+ FG G+G LG S ++ PR + L
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEI-NPRKVFELMGSI 295
Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
V+QI+ G HT V GR++ FG QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 335 (123.0 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 94/295 (31%), Positives = 147/295 (49%)
Query: 187 CGDNSSFC-CGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
C N+SF G + I PR + + V GL T F+ G V+TCG N
Sbjct: 3 CWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
GQLGH + R P+ + L+ ++V ++ G ++ LA+ G VY++G S+ LG
Sbjct: 63 LGQLGHEKS--RKKPEQVVALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
G + PR I++ I +V+V+ G H +AL + V+ WG+ G LG G + K
Sbjct: 120 GSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 364 TL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
P+ + SL +Q+ A +FVL +G+++G+G FG LG D +D+ + P
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PN 234
Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
+L SLR + I G HT +T G +F FG QLGH++ + P ++F
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 305 (112.4 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 83/293 (28%), Positives = 139/293 (47%)
Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G HT+ + + +V++CG + G LGH + ++ A ++V VS E H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLA 98
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
+ GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 99 LNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
G N +GQLG G D + +P+ I L + +QIAAG ++ +T +G ++ +G
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRN 217
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
LG +++D P +++ R + I V + G++H AL G V+T+G G G LG
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
H + P + L + Q+ C R+ + + +G +Y FG G G LG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 285 (105.4 bits), Expect = 9.4e-22, P = 9.4e-22
Identities = 83/274 (30%), Positives = 132/274 (48%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGH-GPETTQCVSF 154
+S + +V A N+ ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P Q+ AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304
Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 228 (85.3 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 77/251 (30%), Positives = 121/251 (48%)
Query: 70 IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
+YA G+ + Q+ LL G+ + +R ++++ SDI +Q+ G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLL----GS-EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154
Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+S VF G + G LG G + + S I +Q++A H+ + SG +F
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G N G D N + P L+++L+ + G + T LT G V T G+ +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
LGH T P+ + E +GS+V QIA G + A V +G +YSFG G N LG G
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 306 QHDELQPRAIQ 316
+ P ++
Sbjct: 332 TSNRKSPFTVK 342
Score = 160 (61.4 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 58/219 (26%), Positives = 99/219 (45%)
Query: 50 PQKFRSLVDLAASQL-CAL-HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIV 107
P+ +SL D+ Q+ C HS+ +S+ ++ + N + L + S ++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSL--ALSKASEVFCWGQ-NKYGQLGLGIDCKKQASPQLI 184
Query: 108 ETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
++ G MQI G H+ +++ S ++F G + G LG E + V +
Sbjct: 185 KSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-NLLKSLRTQK 243
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+V + E+H A + + G VFT G GH T+ I PR V L G Q+ G
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACG 302
Query: 225 LNFTG-FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
T F+ G +++ G +GQLG G T +R +P ++
Sbjct: 303 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 340 (124.7 bits), Expect = 5.3e-28, P = 5.3e-28
Identities = 90/300 (30%), Positives = 144/300 (48%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
+++S + H A V ++G++F G N+ G T + +P V+ALK K G
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLG-LGTKTTVNKPTCVKALKSERVKLTACGR 97
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
T T RG+++ CG N GQLG GD DR + + + G + +AAG + A+T
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT 157
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
+G +Y +G S +G G++ + L P+ + +R V VS G H + G +Y
Sbjct: 158 QDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGALY 213
Query: 346 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
T+G+ G LG E + +P+ ++ + + VQV T L + VY FG
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV-VQVACGGGHTVALTEN-EVYSFGLGQ 271
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
FG LG ++ PR+++ R V + G HT ++TD G L+ FGD +LG
Sbjct: 272 FGQLGHGTFIFESRL--PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329
Score = 294 (108.6 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 99/342 (28%), Positives = 156/342 (45%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
++I+ G HT L++ N +F GS+ G LG G +TT T + + V +
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKP-TCVKALKSERVKLTACGR 97
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAGLNFTGF 230
H G ++ CG N+ G D N R F LVE K P K + AG N +
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFH--LVEFFNKQGPIKMLAAGSNTSAA 155
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGV 289
LT G ++ G N+ GQ+G G + TP+ ++ VG V ++ G + VT +G
Sbjct: 156 LTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVTVDGA 211
Query: 290 VYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
+Y+FG + LG + + P+ + + VV+V+ G H VAL + VY++
Sbjct: 212 LYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL-TENEVYSF 267
Query: 348 GKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
G G G LGHG I + LP + + + T ++ D G +Y FG G
Sbjct: 268 GLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGK 327
Query: 407 LGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVV 445
LG + +++ L PR LD +HV ++ G H +V+
Sbjct: 328 LGLGEENFTNQFKPTLCPRFLD----YHVHSVTCGGCHMLVL 365
Score = 266 (98.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 85/282 (30%), Positives = 142/282 (50%)
Query: 87 NGNWKRV-LRFLQSVEHSSDIVETSAGNMQITT-GRYHTLLI-SNSSVFSCGSSLCGVLG 143
+ NW ++ L +V + + + +++T GR HTL+ S ++++CG + G LG
Sbjct: 62 SNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLG 121
Query: 144 HGPETTQCVSFTRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTN 201
G + SF + F + ++A N +A + Q G+++ GDNS G +++N
Sbjct: 122 LG-DCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESN 180
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTL-DRPTP 259
P+ V K V V+ G + F+T+ G ++T G G+LG + L + P
Sbjct: 181 A--LTPQEVSVGKRV--FWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVP 236
Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTF 318
+ + + + VVQ+A G + +A+T N V YSFG G LGHG E + PR ++ F
Sbjct: 237 QQVTDIPD--RVVQVACGGGHTVALTENEV-YSFGLGQFGQLGHGTFIFESRLPRVVEHF 293
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
R KG V + G+ H + +G +YT+G G G LG G+E
Sbjct: 294 R-KG-RVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEE 333
Score = 248 (92.4 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 75/253 (29%), Positives = 117/253 (46%)
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQ 273
VP + ++ G T +T G + GSN GQLG G T+++PT E V
Sbjct: 37 VPLR-ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLT-- 93
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
A G ++ L T G +Y+ G + LG G+ +D ++ F ++G + ++AG
Sbjct: 94 -ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQG-PIKMLAAGSN 151
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
AL G +Y WG G +G G E + P+ +S K V C FV VD
Sbjct: 152 TSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWVS-CGYYHSAFVTVD- 209
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
G++Y FG G LG +++ + ++ D V Q++ G HTV +T+ ++
Sbjct: 210 GALYTFGEKDSGKLGLSTEKLANHKVPQQVTDI--PDRVVQVACGGGHTVALTEN-EVYS 266
Query: 454 FGDNERAQLGHDT 466
FG + QLGH T
Sbjct: 267 FGLGQFGQLGHGT 279
Score = 171 (65.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 69/266 (25%), Positives = 118/266 (44%)
Query: 83 LNRCNGNWKRVLRFLQSVEHSS-DIVE--TSAGNMQITTGRYHT--LLISNSSVFSCGSS 137
L C GN + L + +S +VE G +++ +T L + ++ G +
Sbjct: 109 LYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDN 168
Query: 138 LCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
G +G G E+ + T V VS H+AFV G ++T G+ S G
Sbjct: 169 SEGQIGLGKESN---ALTPQEVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLG- 224
Query: 198 RDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL- 254
T + + ++ + + +P + QV G T LT V++ G GQLGHG +
Sbjct: 225 LSTEK-LANHKVPQQVTDIPDRVVQVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIF 282
Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQP 312
+ P+ + + G V A G ++ +T NG++Y+FG G + LG GE++ ++ +P
Sbjct: 283 ESRLPRVVEHFRK-GRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKP 341
Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVAL 338
F HV V+ G H++ L
Sbjct: 342 TLCPRFL--DYHVHSVTCGGCHMLVL 365
Score = 160 (61.4 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 49/185 (26%), Positives = 79/185 (42%)
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
SG+ F G + D A F K +R+S GDEH + +G ++ +G G
Sbjct: 12 SGAVFTFGKSKFADN----APSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQ 67
Query: 355 LGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LG G + P + +LKS + + C R T V G++Y G G LG D
Sbjct: 68 LGLGTKTTVNKPTCVKALKSERVKLTACGRTH-TLVFTSRGNLYACGGNNEGQLGLGD-- 124
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
+D+ + + + ++ G + +T GRL+ +GDN Q+G L P
Sbjct: 125 CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTP 184
Query: 474 TEIFI 478
E+ +
Sbjct: 185 QEVSV 189
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 337 (123.7 bits), Expect = 7.5e-28, P = 7.5e-28
Identities = 92/275 (33%), Positives = 135/275 (49%)
Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
+ C RP+ R R V A G Q +G + + L G V +CG N+ GQLG
Sbjct: 2 YFCWRAGGRRPL-RERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG 59
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
T P+ I LE + +V ++ G + LAV G V+++G+ S LG GE +
Sbjct: 60 TPRGEQPERIPALETL-NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFI 118
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
P+ I+T GI +++V+ G H VAL G V++WG G LG G E + P+ +
Sbjct: 119 PKKIKTLA--GIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176
Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
SL+ QV A +F L +G+ +G+G G L + +P + +L+
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTL 236
Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
V IS G HT V+T G++F FGDN QLGHD
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Score = 292 (107.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 99/349 (28%), Positives = 154/349 (44%)
Query: 110 SAGN--MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
+ GN +Q +G +H+LL+ S+ +V SCG + G LG T + RI +V
Sbjct: 20 AGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGR-KGTPRGEQPERIPALETLNVA 78
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
VS + H+ V G+VF G S G + F P+ ++ L G+ QV G
Sbjct: 79 LVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ L+ G V + G+N+HGQLG G + +P+ + LE + + Q+AAG + A++
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALS 197
Query: 286 GNGVVYSFGSGS--NFCL-GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+G + +GS S L G+ +P +I + G VV +S G +H L G
Sbjct: 198 LSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDG 255
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGW 401
V+T+G G LGH +K P+ + ++ L Q+ C + TG V FG
Sbjct: 256 KVFTFGDNSYGQLGHDPTAEKRGPQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSFG- 313
Query: 402 MGFGSLG-FPDRGVSDKVLRPRI-LDSLRAHHVSQISTGLYHTVVVTDR 448
G G P G + + L V I G Y V T +
Sbjct: 314 RGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQ 362
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 336 (123.3 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 103/346 (29%), Positives = 156/346 (45%)
Query: 140 GVLGHGPETTQCVSFTRIN-FPSAAHVV----QVSASENHAAFVLQSGQVFTCGDNSSFC 194
G+L G + + V + P ++VV Q+ H A V + G+VFT G+
Sbjct: 223 GILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGR 282
Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGD 252
GH I RP+LVE L V G T ++ G + + G H G LGHG
Sbjct: 283 LGH-GIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGS 341
Query: 253 TLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
+ PK ++ PLE + V+ +A G + T NG +++FG G+ LGHG +
Sbjct: 342 DISHWIPKRVSGPLEGL-QVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSY 400
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALD----------SSGYVYTWGKGYCGALGHGDEI 361
P+ +Q+ G+ V+V+ H A+ SS ++TWG G LGHG++
Sbjct: 401 PKEVQSLN--GLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKE 458
Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
LP +SSL + ++ T L +G V+ G G LG +SD L
Sbjct: 459 TYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG---NSISDGKLPC 515
Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DT 466
+ D L V +I+ G +H V+T R +F +G +LGH DT
Sbjct: 516 LVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDT 561
Score = 280 (103.6 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 81/281 (28%), Positives = 136/281 (48%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
+ G YHT ++S S +FS G + G+LGHG + + + R++ P V+ V+
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 366
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H+A +G++FT GD + GH + + P+ V++L G+ +V + T +
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425
Query: 232 T-IRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
+ G + T G +LGHG+ P ++ L + + +IA G ++
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 484
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+A+T +G V++ G ++ LG+ +L P +Q R G V ++ G HV L S
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGAHHVAVLTSR 542
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
V+TWGKG G LGHGD DK P + +L+ H+ C
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSC 583
Score = 254 (94.5 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 83/315 (26%), Positives = 138/315 (43%)
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
G+V+T G + + PR +E+ + Q+ G+ +T +G V T G
Sbjct: 217 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG-SNF- 299
G+LGHG +D PK + L + ++ +A G + V+ +G ++S+G G N
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
LGHG P+ + +G+ V+ V+ G H ++G ++T+G G G LGHG+
Sbjct: 336 LLGHGSDISHWIPKRVSG-PLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 394
Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----TGSVYG----FGWMGFGSLGFPD 411
+ P+ + SL V+V T +V+ T + F W G G
Sbjct: 395 RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTW-GDGDKNRLG 453
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-- 469
G + L P + SL ++ +I+ G TV +T G +F G QLG+ G
Sbjct: 454 HGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL 513
Query: 470 -CLEPTEIFIQEMEE 483
CL + + +EE
Sbjct: 514 PCLVQDRLVGEFVEE 528
Score = 215 (80.7 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 74/263 (28%), Positives = 122/263 (46%)
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEE--VGSVVQIAAGPSYMLAV 284
G + + G V T G G + +T+ D TP+ PLE V V QI G ++ V
Sbjct: 211 GDVYVWGEVWTEGILPDGTASN-ETVKTDVLTPR---PLESNVVLDVHQIVCGVRHVALV 266
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
T G V+++G LGHG Q D +P+ ++ I V + G+ H + +SG +
Sbjct: 267 TRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFV--ACGEYHTCVVSTSGDL 324
Query: 345 YTWGKGY--CGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
++WG G G LGHG +I +P+ +S L+ + V + + G ++ FG
Sbjct: 325 FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGD 384
Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD-RG---------RL 451
FG LG +R + V P+ + SL +++ ++HT + + G +L
Sbjct: 385 GAFGVLGHGNR---ESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKL 441
Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
F +GD ++ +LGH L PT
Sbjct: 442 FTWGDGDKNRLGHGNKETYLLPT 464
Score = 135 (52.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 50/180 (27%), Positives = 83/180 (46%)
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC- 352
G +N +G+ E+ + L+P + FR S+G ++S G VY WG+ +
Sbjct: 165 GYQNNSDVGY-ERGNMLRP-STDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTE 222
Query: 353 GALGHGDEIDKTL------PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
G L G ++T+ P PL S Q+ R ++ G V+ +G G
Sbjct: 223 GILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGR 282
Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD--NERAQLGH 464
LG G+ + RP++++ L ++ ++ G YHT VV+ G LF +GD + LGH
Sbjct: 283 LG---HGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGH 339
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 307 (113.1 bits), Expect = 4.6e-27, P = 4.6e-27
Identities = 99/338 (29%), Positives = 150/338 (44%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V+S G+ G LG + + ++ S + ++ H + G+VFT G
Sbjct: 17 VWSWGAGTDGQLGTTKLQDELLP-QLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
SS GH D I P+LV Q AG + +GF++ G + TCG+ + GQLGH
Sbjct: 76 SSGQLGHGDILN-ITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134
Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
GDTL TP ++ SV +A G + L + V FGSG LG +
Sbjct: 135 GDTLSLSTPAKVSHFNN-DSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKS 193
Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
K + VVR+SA +H A+ + G ++WG+G+CG G ++LP PLS
Sbjct: 194 VNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG--GPDVHAPQSLPSPLS 251
Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-PDRGV----SDKVLRPRILD 425
+ +AV + VD G V+ G +L P++ S + L ++ D
Sbjct: 252 FRE--VAV---GWNHALLLTVD-GEVFKLG----STLNKQPEKQQLQIDSSEALFEKVPD 301
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
V QI+ G H+ VT+ G + +G E QLG
Sbjct: 302 -FDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLG 338
Score = 229 (85.7 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 57/179 (31%), Positives = 94/179 (52%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+S+G+G++ LG + DEL P+ + I ++ + G HV+AL S G V+TWG+
Sbjct: 17 VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISML--ACGGAHVIALTSGGKVFTWGR 74
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LGHGD ++ TLP+ +S + Q A + + D+G ++ G FG LG
Sbjct: 75 GSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
D +S + P + V ++ G+ H++V+ ++ GFG +R QLG + R
Sbjct: 135 GDT-LS--LSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDR 190
Score = 213 (80.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 81/299 (27%), Positives = 125/299 (41%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H + L S VF+ G G LGHG + ++F + + Q +A +H
Sbjct: 53 LACGGAHVIALTSGGKVFTWGRGSSGQLGHG-DILNITLPKLVSFFDDSVITQAAAGWSH 111
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+ FV SG +FTCG+ S GH DT + P V K V G+ + L
Sbjct: 112 SGFVSDSGCIFTCGNGSFGQLGHGDT-LSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAG 170
Query: 235 GHVHTCGSNTHGQLGHG-DTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
V GS GQLG D + P ++ L++V VV+I+A + A++ +G +S
Sbjct: 171 NQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV-EVVRISANGDHSAAISADGQFFS 229
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
+G G FC G + P + +FR V+ G H + L G V+ G
Sbjct: 230 WGRG--FCGGPDVHAPQSLPSPL-SFRE-------VAVGWNHALLLTVDGEVFKLGSTLN 279
Query: 353 GALGHGD-EIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
+ID + L E + +Q+ A + + + G V +GW G LG
Sbjct: 280 KQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLG 338
Score = 200 (75.5 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 75/268 (27%), Positives = 124/268 (46%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q G H+ +S+S +F+CG+ G LGHG +T + +++ + V V+
Sbjct: 104 QAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHG-DTLSLSTPAKVSHFNNDSVKMVACGMR 162
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + QV G G D + + P +V LK V +++A + + ++
Sbjct: 163 HSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAIS 222
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G + G G G D P+S+ +PL S ++A G ++ L +T +G V+
Sbjct: 223 ADGQFFSWG---RGFCGGPDV---HAPQSLPSPL----SFREVAVGWNHALLLTVDGEVF 272
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRK-----GIHVVRVSAGDEHVVALDSSGYVYT 346
GS L + +LQ + + K G+ V++++AG EH A+ +G V T
Sbjct: 273 KLGS----TLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKT 328
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKS 374
WG G G LG G+ D+T PE L SL S
Sbjct: 329 WGWGEHGQLGLGNTNDQTSPE-LVSLGS 355
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 305 (112.4 bits), Expect = 7.8e-27, P = 7.8e-27
Identities = 104/360 (28%), Positives = 159/360 (44%)
Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
+ S +SV + GS G LG G E + S P V V S N A + G+
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSV-VGGSRNSLA-ICDDGK 58
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
+FT G N GH + P LV++L V Q G + +G + G N
Sbjct: 59 LFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 244 THGQLGHGDTLD---RPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+GQ G + D RP + I + +V Q+AAG ++ + +T G V+++G
Sbjct: 119 EYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQP- 177
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALG 356
G+ P +Q G+ VR ++ G H +AL G ++ WG G LG
Sbjct: 178 ---WPPGDIKQISVPVRVQ-----GLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLG 229
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
GD ++ P P+ L V + A + L + G VYG+G G LGF D S
Sbjct: 230 TGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSS 289
Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
K+L P+ ++ L + Q+S G H+V +T GR+F FG + +LG+ +P E+
Sbjct: 290 KML-PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLEL 348
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 323 (118.8 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 81/260 (31%), Positives = 133/260 (51%)
Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
+PR ++A G+ Q +G + + L V++CG N+ GQLG P+ I
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGI 323
L ++ V ++ G + +AV G V+++G+GS LG GE + P I+ GI
Sbjct: 71 LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALA--GI 127
Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 382
+++VS G H +AL G+V++WG+ G LG G + + +P+ + SL+ QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
+F L TG+ +G+G G L V +++ +P + +L+ V IS G HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247
Query: 443 VVVTDRGRLFGFGDNERAQL 462
V+T+ G++F FG N QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267
Score = 279 (103.3 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 80/301 (26%), Positives = 148/301 (49%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
S ++Q ++ E+H+ + + +V++CGDNS G R ++ RP ++AL +
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
V+ G + + +G V G+ + GQLG G+ + P I L + ++Q++ G
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA++ +G V+S+G S LG G+ + P+ +++ +GI + +V+AG H AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195
Query: 339 DSSGYVYTWGKGYCGALG-HGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
+G + WG G L G+++ + + P + +LK+ + + T VL + G
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
V+ FG G L P + P++++ + VSQI YHT+ V G++
Sbjct: 256 VFTFGGNSSGQLQ-PSPRSGQR--GPQLIEGIGGR-VSQIECASYHTIAYVYTTGQVVSL 311
Query: 455 G 455
G
Sbjct: 312 G 312
Score = 276 (102.2 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 85/295 (28%), Positives = 138/295 (46%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSAS 171
+Q +G +H+LL+ SN V+SCG + G LG ++T+ I + HV VS
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPE--PIQALNDLHVDLVSCG 82
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ H+ V G+VF G S G + F P ++AL G+ QV+ G + L
Sbjct: 83 KEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLAL 142
Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
+ GHV + G N+ GQLG G ++ + P+ + LE + + Q+AAG ++ A++ G
Sbjct: 143 SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFALSLTGT- 200
Query: 291 YSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
SFG GSN L + +++ +P +I K + V+ +S G EH L G V+
Sbjct: 201 -SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLTEEGQVF 257
Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
T+G G L + P+ + + ++ CA + TG V G
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 217 (81.4 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 81/282 (28%), Positives = 134/282 (47%)
Query: 86 CNGN-WKRV-LRFLQSVEHSSDIVETSAGNMQITT-GRYHTLLISNSS-VFSCGSSLCGV 141
C N W ++ R QS E I + ++ + + G+ H++ + + VF+ G+ G
Sbjct: 46 CGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQ 105
Query: 142 LGHGPETTQCVSF--TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
LG G E + +SF T+I + ++QVS H+ + + G VF+ G NS G
Sbjct: 106 LGIG-EFKE-ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGK 163
Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPT 258
+R P+ V++L+G+P QV AG + L++ G GSN GQL G+ +
Sbjct: 164 NSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQI 223
Query: 259 --PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P SI L+ + SV+ I+ G + +T G V++FG S+ L + + P+ I+
Sbjct: 224 YKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIE 282
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
G V ++ H +A YVYT G+ +LG G
Sbjct: 283 GI---GGRVSQIECASYHTIA-----YVYTTGQVV--SLGRG 314
Score = 162 (62.1 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 41/154 (26%), Positives = 75/154 (48%)
Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
+PR ++ GI +++ ++G+ H + L S+ VY+ G G LG + PEP+
Sbjct: 11 KPRRLKA-GTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQ 69
Query: 371 SLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
+L H+ + C ++ V G V+ +G G LG + + P + +L
Sbjct: 70 ALNDLHVDLVSCGKEHSVAVC-HKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAG 126
Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ Q+S G YH++ +++ G +F +G N QLG
Sbjct: 127 IKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 160
Score = 161 (61.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 54/197 (27%), Positives = 82/197 (41%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q++ G YH+L +S VFS G + G LG G + ++ + QV+A
Sbjct: 130 IQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 189
Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
H+ + +G F G N S I++P + ALK + ++ G T
Sbjct: 190 THSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAV 249
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
LT G V T G N+ GQL + P+ I + G V QI SY + +
Sbjct: 250 LTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIG--GRVSQIECA-SY------HTIA 300
Query: 291 YSFGSGSNFCLGHGEQH 307
Y + +G LG G H
Sbjct: 301 YVYTTGQVVSLGRGPSH 317
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 296 (109.3 bits), Expect = 8.2e-26, P = 8.2e-26
Identities = 102/363 (28%), Positives = 160/363 (44%)
Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
+++ +S+ + GS G LG G E + P + V VS S N A + G
Sbjct: 1 MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSV-VSGSRNSLA-ICDDGT 58
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
+FT G N GH+ + P V+AL V Q G + +G + G N
Sbjct: 59 MFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 244 THGQLGHG---DTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+GQ G D + RP + I + +V Q+AAG ++ + +T G V+++G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQP- 177
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALG 356
G+ P +Q G+ VR ++ G H +AL+ G + WG G LG
Sbjct: 178 ---WPPGDIKQISVPVRVQ-----GLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLG 229
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
GD + P P+ L V + A + L D G VYG+G G LG D S
Sbjct: 230 TGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSS 289
Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
K++ P+ ++ L + Q+S G H+V +T GR+F FG + +LG+ +P E+
Sbjct: 290 KMV-PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLEL 348
Query: 477 FIQ 479
I+
Sbjct: 349 PIK 351
Score = 240 (89.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 83/304 (27%), Positives = 133/304 (43%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASEN 173
+ +G ++L I + ++F+ G + G LGH PET T+ + +R+ + + Q +
Sbjct: 43 VVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIP-SRVKALANVKITQAAIGGW 101
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLV--EALKGVPCKQVTAGLNF 227
H V G+ + G N CG + RP+ R ++ + +QV AG
Sbjct: 102 HCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTH 161
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
+ LT GHV T G GD P + LE V IA G + LA+ +
Sbjct: 162 SVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL---IAVGAFHNLALEED 214
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
G + ++G+ LG G+ P +Q + +V ++AG H AL G VY W
Sbjct: 215 GRLLAWGNNEYGQLGTGDTQPTSHPVPVQGL--DDLTLVDIAAGGWHSTALTDKGEVYGW 272
Query: 348 GKGYCGALGHGD--EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
G+G G LG GD + K +P+ ++ L +QV + L G ++ FG G
Sbjct: 273 GRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHG 332
Query: 406 SLGF 409
LG+
Sbjct: 333 RLGY 336
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 319 (117.4 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 80/266 (30%), Positives = 130/266 (48%)
Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
+PR +EA G+ + +G + L V++CG N+ GQLG P+ I L
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 77
Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
V + ++ G + +AV G V+++G+GS LG GE + P I + GI
Sbjct: 78 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLA--GIK 134
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 383
+++VS G H +AL G V++WG G LG G+ + + P+ + SL+ QV A
Sbjct: 135 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 194
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
+F L G+ +G+G G L +++ +P + +L+ +V IS G HT
Sbjct: 195 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 254
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
V+T+ G++F FG + QL H G
Sbjct: 255 VLTEDGQVFTFGGSSSEQLQHSPRSG 280
Score = 290 (107.1 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 84/293 (28%), Positives = 137/293 (46%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
++ +G H+LL+ SN V+SCG + G LG P++T+ I S H+ VS
Sbjct: 31 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE--PIQALSTVHIDLVSCG 88
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ H+ V G+VFT G S G ++ F P + +L G+ QV+ G + L
Sbjct: 89 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 148
Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
+ G V + GSN GQLG G+ L + +P+ + LE + + Q+AAG ++ A++ G
Sbjct: 149 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 207
Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
+ +G SG G+ + +P +I K ++VV +S G EH L G V+T+
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 265
Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
G L H + P+ + + H++ C + TG V G
Sbjct: 266 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 318
Score = 281 (104.0 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 82/306 (26%), Positives = 146/306 (47%)
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
R+ + +++ ++ E H+ + + +V++CGDNS G + + RP ++AL
Sbjct: 21 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSP-QSTKRPEPIQALST 79
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
V V+ G + + +G V T G+ + GQLG G++ + P I L + ++Q+
Sbjct: 80 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 138
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
+ G + LA++ +G V+S+GS LG G + P+ +++ +GI + +V+AG
Sbjct: 139 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 196
Query: 334 HVVALDSSGYVYTWGKGYCGALG-HGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVL 390
H AL G + WG G L G+ + + P + +LK+ V + T VL
Sbjct: 197 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 256
Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 449
+ G V+ FG L R P++++ + H VSQI G YHT+ V G
Sbjct: 257 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGIGGH-VSQIECGSYHTIAYVYTTG 312
Query: 450 RLFGFG 455
++ G
Sbjct: 313 QVVSLG 318
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 318 (117.0 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 99/365 (27%), Positives = 163/365 (44%)
Query: 129 SSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPS---AAHVVQVSASENHAAFVLQSGQV 184
+ + CG + G LG E+T V I P+ V V+ E H F+ + G++
Sbjct: 3 AELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKM 62
Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
++ G N G F V Q++AG + T +T G V GSN
Sbjct: 63 WSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 245 HGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF-CLG 302
HGQLG + TP+ + +E+ +VQ+A+G ++ +A+ G V+ +G ++ C+
Sbjct: 123 HGQLGMESKFTWQGTPRRV---QEINDIVQVASGSNHCIALDEGGRVFVWGEQADGRCIH 179
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
E ++L G+ +VRV AG H +AL +SG V+TWG+ G LG D
Sbjct: 180 RPEPVEQLS----------GVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRP 229
Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
+T + + + V+ T +L G + FG G GF + +K P
Sbjct: 230 QTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKK--VEKRTNPT 287
Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
+ L HV++I+ G HT+ + +G + FG N QLG+ + P + E++
Sbjct: 288 AVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPRKT--DELD 344
Query: 483 EDTGL 487
TG+
Sbjct: 345 HVTGV 349
Score = 284 (105.0 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 85/297 (28%), Positives = 141/297 (47%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+T G HT+ ++ + ++S GS++ G LG G T S +++ S+A ++Q+SA +H
Sbjct: 46 VTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSH 105
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
V G+VF G N G PR V+ + + QV +G N L
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIV--QVASGSNHCIALDEG 163
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G V G G+ H RP P + L V +V++ AG + LA++ +G V+++G
Sbjct: 164 GRVFVWGEQADGRCIH-----RPEP--VEQLSGV-PIVRVLAGARHCLALSASGAVFTWG 215
Query: 295 SGSNFCLGHGEQHDELQPR-AIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
++ LG D+L+P+ ++Q + G+ VV + GD H V L G +++G
Sbjct: 216 QNNSGELGI----DDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDAL 271
Query: 353 GALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G G G +++K T P +S L ++ A T + + G+ Y FG G LG
Sbjct: 272 GQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHT-IAICKGAPYPFGLNSSGQLG 327
Score = 278 (102.9 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 87/290 (30%), Positives = 144/290 (49%)
Query: 109 TSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
+SA +QI+ GR HT+ +++ VF+ GS+ G LG + T + R+ +VQ
Sbjct: 92 SSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ--EINDIVQ 149
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
V++ NH + + G+VF G+ + C HR P VE L GVP +V AG
Sbjct: 150 VASGSNHCIALDEGGRVFVWGEQADGRCIHR--------PEPVEQLSGVPIVRVLAGARH 201
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
L+ G V T G N G+LG D + + + + ++ +G VV+ A G ++ + +T
Sbjct: 202 CLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNHTVLLTHC 260
Query: 288 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
G +SFGS + G G++ ++ P A+ G HV R++AG H +A+ G Y
Sbjct: 261 GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLI--GSHVTRIAAGACHTIAI-CKGAPYP 317
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
+G G LG+G + ++ P L H+ V A +TF + +G++
Sbjct: 318 FGLNSSGQLGNGKIMTQSTPRKTDEL-DHVT-GVFAGYHQTFFVRSSGTI 365
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 60/244 (24%), Positives = 104/244 (42%)
Query: 233 IRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNG 288
+R + CG GQLG T+ P AP + G+ V + G + + +T +G
Sbjct: 1 MRAELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDG 60
Query: 289 VVYSFGSGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
++S GS + LG G + + + P + T K ++++SAG H V++ G V+
Sbjct: 61 KMWSVGSNMDGQLGRGSRTEGSFSIYPVS-WTSSAK---IIQISAGRSHTVSVTDDGRVF 116
Query: 346 TWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
WG G LG + + P + + VQV + L + G V+ +G
Sbjct: 117 AWGSNEHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIALDEGGRVFVWGEQAD 174
Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
G + RP ++ L + ++ G H + ++ G +F +G N +LG
Sbjct: 175 GRC----------IHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGI 224
Query: 465 DTLR 468
D LR
Sbjct: 225 DDLR 228
Score = 140 (54.3 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 60/273 (21%), Positives = 112/273 (41%)
Query: 102 HSSDIVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
H + VE +G +++ G H L +S S +VF+ G + G LG Q S ++
Sbjct: 179 HRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQ-TSVQHVH 237
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VV+ + +NH + G+ F+ G ++ CG P V L G
Sbjct: 238 QMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHV 297
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
++ AG T +G + G N+ GQLG+G + + TP+ +E+ V + AG
Sbjct: 298 TRIAAGACHT-IAICKGAPYPFGLNSSGQLGNGKIMTQSTPRKT---DELDHVTGVFAGY 353
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG--IHVVRVSAGDEHVV 336
V +G + C + +L +++ +G + V+ + +
Sbjct: 354 HQTFFVRSSGTIEQNEIVGPSC--PMQYPIKLDHESLKKLLDEGDALEVMSLIESVFSSL 411
Query: 337 ALDSSGYVYT----WGKGYCGALGHGDEIDKTL 365
A + ++Y + G+C HG ++D+ +
Sbjct: 412 ASMNMSFLYKDERRYNVGFCFERSHGIDMDQVM 444
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 318 (117.0 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 99/365 (27%), Positives = 163/365 (44%)
Query: 129 SSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPS---AAHVVQVSASENHAAFVLQSGQV 184
+ + CG + G LG E+T V I P+ V V+ E H F+ + G++
Sbjct: 3 AELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKM 62
Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
++ G N G F V Q++AG + T +T G V GSN
Sbjct: 63 WSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 245 HGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF-CLG 302
HGQLG + TP+ + +E+ +VQ+A+G ++ +A+ G V+ +G ++ C+
Sbjct: 123 HGQLGMESKFTWQGTPRRV---QEINDIVQVASGSNHCIALDEGGRVFVWGEQADGRCIH 179
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
E ++L G+ +VRV AG H +AL +SG V+TWG+ G LG D
Sbjct: 180 RPEPVEQLS----------GVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRP 229
Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
+T + + + V+ T +L G + FG G GF + +K P
Sbjct: 230 QTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKK--VEKRTNPT 287
Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
+ L HV++I+ G HT+ + +G + FG N QLG+ + P + E++
Sbjct: 288 AVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPRKT--DELD 344
Query: 483 EDTGL 487
TG+
Sbjct: 345 HVTGV 349
Score = 284 (105.0 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 85/297 (28%), Positives = 141/297 (47%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+T G HT+ ++ + ++S GS++ G LG G T S +++ S+A ++Q+SA +H
Sbjct: 46 VTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSH 105
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
V G+VF G N G PR V+ + + QV +G N L
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIV--QVASGSNHCIALDEG 163
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G V G G+ H RP P + L V +V++ AG + LA++ +G V+++G
Sbjct: 164 GRVFVWGEQADGRCIH-----RPEP--VEQLSGV-PIVRVLAGARHCLALSASGAVFTWG 215
Query: 295 SGSNFCLGHGEQHDELQPR-AIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
++ LG D+L+P+ ++Q + G+ VV + GD H V L G +++G
Sbjct: 216 QNNSGELGI----DDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDAL 271
Query: 353 GALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G G G +++K T P +S L ++ A T + + G+ Y FG G LG
Sbjct: 272 GQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHT-IAICKGAPYPFGLNSSGQLG 327
Score = 278 (102.9 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 87/290 (30%), Positives = 144/290 (49%)
Query: 109 TSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
+SA +QI+ GR HT+ +++ VF+ GS+ G LG + T + R+ +VQ
Sbjct: 92 SSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ--EINDIVQ 149
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
V++ NH + + G+VF G+ + C HR P VE L GVP +V AG
Sbjct: 150 VASGSNHCIALDEGGRVFVWGEQADGRCIHR--------PEPVEQLSGVPIVRVLAGARH 201
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
L+ G V T G N G+LG D + + + + ++ +G VV+ A G ++ + +T
Sbjct: 202 CLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNHTVLLTHC 260
Query: 288 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
G +SFGS + G G++ ++ P A+ G HV R++AG H +A+ G Y
Sbjct: 261 GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLI--GSHVTRIAAGACHTIAI-CKGAPYP 317
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
+G G LG+G + ++ P L H+ V A +TF + +G++
Sbjct: 318 FGLNSSGQLGNGKIMTQSTPRKTDEL-DHVT-GVFAGYHQTFFVRSSGTI 365
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 60/244 (24%), Positives = 104/244 (42%)
Query: 233 IRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNG 288
+R + CG GQLG T+ P AP + G+ V + G + + +T +G
Sbjct: 1 MRAELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDG 60
Query: 289 VVYSFGSGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
++S GS + LG G + + + P + T K ++++SAG H V++ G V+
Sbjct: 61 KMWSVGSNMDGQLGRGSRTEGSFSIYPVS-WTSSAK---IIQISAGRSHTVSVTDDGRVF 116
Query: 346 TWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
WG G LG + + P + + VQV + L + G V+ +G
Sbjct: 117 AWGSNEHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIALDEGGRVFVWGEQAD 174
Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
G + RP ++ L + ++ G H + ++ G +F +G N +LG
Sbjct: 175 GRC----------IHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGI 224
Query: 465 DTLR 468
D LR
Sbjct: 225 DDLR 228
Score = 140 (54.3 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 60/273 (21%), Positives = 112/273 (41%)
Query: 102 HSSDIVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
H + VE +G +++ G H L +S S +VF+ G + G LG Q S ++
Sbjct: 179 HRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQ-TSVQHVH 237
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VV+ + +NH + G+ F+ G ++ CG P V L G
Sbjct: 238 QMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHV 297
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
++ AG T +G + G N+ GQLG+G + + TP+ +E+ V + AG
Sbjct: 298 TRIAAGACHT-IAICKGAPYPFGLNSSGQLGNGKIMTQSTPRKT---DELDHVTGVFAGY 353
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG--IHVVRVSAGDEHVV 336
V +G + C + +L +++ +G + V+ + +
Sbjct: 354 HQTFFVRSSGTIEQNEIVGPSC--PMQYPIKLDHESLKKLLDEGDALEVMSLIESVFSSL 411
Query: 337 ALDSSGYVYT----WGKGYCGALGHGDEIDKTL 365
A + ++Y + G+C HG ++D+ +
Sbjct: 412 ASMNMSFLYKDERRYNVGFCFERSHGIDMDQVM 444
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 320 (117.7 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 100/343 (29%), Positives = 161/343 (46%)
Query: 116 ITTGRYHT-LLISNSSVFSCG-----SSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
I++G Y++ +L N V+ G + +LG Q + F S + VV VS
Sbjct: 754 ISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPF---KLESLSDVVSVS 810
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
H A V +G++ T G + GH DTN I P+++++L QV G T
Sbjct: 811 IGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQI-EPKIIQSLTSFWITQVQCGEKHTI 869
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
LT G V++ G++ +GQLG GD +P ++ LE+ +V+QIA+G ++ +T +
Sbjct: 870 CLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKY-NVLQIASGSTHCAVLTTSKE 928
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V FG+G+ G P + + K +H+ R+ G A+ G VYTWG
Sbjct: 929 VLVFGNGAAM----GAASVVSLPTLVPSL--KYLHIDRLCCGHYSTAAITECGDVYTWGT 982
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G LGHG +T P+ + +L++ Q+ R T L D+G ++ G FG LG
Sbjct: 983 GQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLG- 1039
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
+S +P+ ++SL +S G + V + D R F
Sbjct: 1040 ---QMSGDQNKPKRIESLTKTTFISVSCGENYNVALFDTTRSF 1079
Score = 263 (97.6 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 78/258 (30%), Positives = 125/258 (48%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P +E+L V V+ G + G + T G +GQLGHGDT ++ PK I L
Sbjct: 797 PFKLESLSDVV--SVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLT 854
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
+ Q+ G + + +T NG VYS+G+ LG G+ P + + +V+
Sbjct: 855 SFW-ITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEK--YNVL 911
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKR 385
++++G H L +S V +G G A+G + +LP + SLK +L + ++C
Sbjct: 912 QIASGSTHCAVLTTSKEVLVFGNG--AAMGAASVV--SLPTLVPSLK-YLHIDRLCCGHY 966
Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
T + + G VY +G G LG G + P+++++LR + QIS G HT +
Sbjct: 967 STAAITECGDVYTWG-TG-QELG---HGGNSTETSPKLIEALRNQSIRQISCGGRHTAFL 1021
Query: 446 TDRGRLFGFGDNERAQLG 463
TD GR+F G + QLG
Sbjct: 1022 TDSGRIFTCGKDSFGQLG 1039
Score = 232 (86.7 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 74/233 (31%), Positives = 115/233 (49%)
Query: 232 TIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
T RG + T GS ++ +LG T +PTP+ + P + + I++G Y +T NG
Sbjct: 711 TSRG-LMTWGSASNCKLGFKVTAKDQSQPTPERL-PNFNIPDICSISSGSYYSSVLTENG 768
Query: 289 VVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
VY +G G+ LG + D+L P +++ VV VS G H A+ ++G
Sbjct: 769 DVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLS----DVVSVSIGFCHGAAVRANGE 824
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
+ TWG G G LGHGD ++ P+ + SL S QV ++ T L G VY +G
Sbjct: 825 LLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASE 884
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
+G LG D V+ P + +L ++V QI++G H V+T + FG+
Sbjct: 885 YGQLGLGD--VTQHS-SPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN 934
Score = 155 (59.6 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 105 DIVETSAGNMQITT-GRYHTLLISNSSVFSCG----SSLCGVLGHGPE--TTQCVSFTRI 157
D+ + S+ MQ++ +Y+ L I++ S C S V G+G VS +
Sbjct: 892 DVTQHSSP-MQVSALEKYNVLQIASGSTH-CAVLTTSKEVLVFGNGAAMGAASVVSLPTL 949
Query: 158 NFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
PS H+ ++ A + + G V+T G GH N P+L+EAL+
Sbjct: 950 -VPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQEL--GHGG-NSTETSPKLIEALRN 1005
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
+Q++ G T FLT G + TCG ++ GQLG D+ PK I L + + + ++
Sbjct: 1006 QSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSG-DQNKPKRIESLTKT-TFISVS 1063
Query: 276 AGPSYMLAV 284
G +Y +A+
Sbjct: 1064 CGENYNVAL 1072
Score = 146 (56.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 51/185 (27%), Positives = 86/185 (46%)
Query: 285 TGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
T G++ ++GS SN LG D+ QP + + +S+G + L +G
Sbjct: 711 TSRGLM-TWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTENGD 769
Query: 344 VYTWGKGYCGA-----LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
VY WG+G LG D+ LP L SL ++V + V + G +
Sbjct: 770 VYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSI-GFCHGAAVRAN-GELLT 827
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
+G G LG D ++ + P+I+ SL + ++Q+ G HT+ +T G+++ +G +E
Sbjct: 828 WGVGENGQLGHGD---TNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASE 884
Query: 459 RAQLG 463
QLG
Sbjct: 885 YGQLG 889
Score = 49 (22.3 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 15/66 (22%), Positives = 34/66 (51%)
Query: 265 LEEVGSVVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
+ +V +++ I PS M + T N V + S S+ +++D ++ A+Q F++
Sbjct: 1282 VNKVTNILNITQSPSSMASYTTSNPTVTAVSSSSSENSEFLKEYD-IKLEALQNFKKTCT 1340
Query: 324 HVVRVS 329
+++ S
Sbjct: 1341 KIIKSS 1346
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 318 (117.0 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 90/302 (29%), Positives = 146/302 (48%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V +S ++H+AFV + G++F GDN+ G + P+ +P V+ LKG + V G
Sbjct: 37 VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQ-IKGPVTKPVCVKVLKGERAQSVACGT 95
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ T T +G + G N+ GQLG G D + + + P + + ++AG A+T
Sbjct: 96 DHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALT 155
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
+G ++ +G S LG G L P+ + + IH V S G H + SG VY
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNM--GQSIHWV--SCGYRHSALVTDSGDVY 211
Query: 346 TWGKGYCGALG-HGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
++G+ G LG ++ + + P+ + SL H +QV + T L + +Y FG
Sbjct: 212 SFGESADGRLGLSAHQLANHSYPQRVESL--HSVLQVACGGKHTLALTED-ELYCFGGGE 268
Query: 404 FGSLGFPDRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
FG LG V+D P + R V+ ++ G H+ ++TD G L+ FGD +L
Sbjct: 269 FGQLGLGTLVFVADS---PVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRHGKL 325
Query: 463 GH 464
GH
Sbjct: 326 GH 327
Score = 244 (91.0 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 77/250 (30%), Positives = 122/250 (48%)
Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSASEN 173
+ G HTL+ S + + G + G LG G +SF R+ F A + +SA ++
Sbjct: 91 VACGTDHTLVSTSQGEILAAGGNSDGQLGLG-HCNDSISFQRLRPFCDYAPIKLLSAGDH 149
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+A + + G++F GDNS+ G + + + P+ E G V+ G + +T
Sbjct: 150 TSAALTEDGRLFLWGDNSAGQLGFGNDSHALL-PK--ELNMGQSIHWVSCGYRHSALVTD 206
Query: 234 RGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G V++ G + G+LG + P+ + E + SV+Q+A G + LA+T + + Y
Sbjct: 207 SGDVYSFGESADGRLGLSAHQLANHSYPQRV---ESLHSVLQVACGGKHTLALTEDEL-Y 262
Query: 292 SFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
FG G LG G P A+ FR KG V V+ G++H + SG +YT+G G
Sbjct: 263 CFGGGEFGQLGLGTLVFVADSPVAVGHFR-KG-RVTHVTCGEQHSALITDSGLLYTFGDG 320
Query: 351 YCGALGHGDE 360
G LGHGDE
Sbjct: 321 RHGKLGHGDE 330
Score = 244 (91.0 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 74/248 (29%), Positives = 116/248 (46%)
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPS 279
++ G + + F+T +G + G N GQLG + P K + G Q +A G
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGL--QIKGPVTKPVCVKVLKGERAQSVACGTD 96
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ L T G + + G S+ LG G +D + + ++ F + +SAGD AL
Sbjct: 97 HTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYA-PIKLLSAGDHTSAALT 155
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
G ++ WG G LG G++ LP+ L+ +S V C + V D+G VY F
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWVS-CGYRHSALV-TDSGDVYSF 213
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
G G LG +++ P+ ++SL H V Q++ G HT+ +T+ L+ FG E
Sbjct: 214 GESADGRLGLSAHQLANHSY-PQRVESL--HSVLQVACGGKHTLALTE-DELYCFGGGEF 269
Query: 460 AQLGHDTL 467
QLG TL
Sbjct: 270 GQLGLGTL 277
Score = 178 (67.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 61/223 (27%), Positives = 102/223 (45%)
Query: 122 HT--LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
HT L + +F G + G LG G ++ + +N + H VS H+A V
Sbjct: 149 HTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP-KELNMGQSIH--WVSCGYRHSALVT 205
Query: 180 QSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
SG V++ G+++ G H+ N P+ VE+L V QV G T LT
Sbjct: 206 DSGDVYSFGESADGRLGLSAHQLANHSY--PQRVESLHSV--LQVACGGKHTLALT-EDE 260
Query: 237 VHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
++ G GQLG G + +P ++ + G V + G + +T +G++Y+FG
Sbjct: 261 LYCFGGGEFGQLGLGTLVFVADSPVAVGHFRK-GRVTHVTCGEQHSALITDSGLLYTFGD 319
Query: 296 GSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G + LGHG+++ ++ P Q F V+ V+ G H++
Sbjct: 320 GRHGKLGHGDENFTNQFTPTVCQRFFEYS--VMTVACGSSHML 360
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 307 (113.1 bits), Expect = 5.3e-25, P = 5.3e-25
Identities = 77/260 (29%), Positives = 126/260 (48%)
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 281
A N ++T V+ G N LG GD+ PK + L + + +GP ++
Sbjct: 29 ASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGP-HV 87
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
L VT +G +Y++G LG+G + + P + T +G V VS G H +AL
Sbjct: 88 LLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVST-NLQGKRVTEVSCGSHHSLALTHE 146
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
G V+ WG CG +G G ++ P +S+ L++ + V + + + + D G VYG+G
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWG 206
Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
+ G G LG + G L P L +L+ V QI++G H++ +TD G L+ +G N
Sbjct: 207 YNGNGQLGLGNNG---NQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYG 263
Query: 461 QLGHDTLRGCLEPTEIFIQE 480
QLG L P ++ ++
Sbjct: 264 QLGTGNKSNQLSPVQVMTEK 283
Score = 289 (106.8 bits), Expect = 7.0e-23, P = 7.0e-23
Identities = 76/276 (27%), Positives = 134/276 (48%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
+ V+ G + LG G ++ ++ +++ S ++ +S S H V + G+++
Sbjct: 40 DDEVYVLGLNCSNCLGTG-DSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
G N G+ TN+ + P LV L+G +V+ G + + LT G V G N
Sbjct: 99 WGHNGYSQLGNGTTNQGV-SPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNC 157
Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
GQ+G G T ++PTP+ ++ + +V IA G + +AVT NG VY +G N LG G
Sbjct: 158 GQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
++L P + +G V+++++G H +AL G +Y WG G LG G++ ++
Sbjct: 218 NGNQLTP--CRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 366 PEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
P + + K + + C + +G VY +G
Sbjct: 276 PVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 237 (88.5 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 62/240 (25%), Positives = 114/240 (47%)
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FT 228
AS N A ++ +V+ G N S C G D+ I P+ ++ L G ++ G
Sbjct: 29 ASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTI-APKKLDCLSGKKLISLSYGSGPHV 87
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
+T G ++ G N + QLG+G T +P ++ + V +++ G + LA+T G
Sbjct: 88 LLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEG 147
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
V+++G + +G G ++ PR + + + +V ++ G +A+ +G VY WG
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKV-IVNIACGQTSSMAVTDNGEVYGWG 206
Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G LG G+ ++ P L +L+ +Q+ + + L D G +Y +G +G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLG 266
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 72/244 (29%), Positives = 122/244 (50%)
Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 179
H LL++ + +++ G + LG+G T Q VS ++ V +VS +H+ +
Sbjct: 86 HVLLVTEDGELYAWGHNGYSQLGNGT-TNQGVSPILVSTNLQGKRVTEVSCGSHHSLALT 144
Query: 180 QSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHV 237
G+VF G N+ G T N+P PR V L+ + G + +T G V
Sbjct: 145 HEGEVFAWGYNNCGQVGSGSTANQPT--PRKVSNCLQNKVIVNIACGQTSSMAVTDNGEV 202
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G N +GQLG G+ ++ TP + L+ V+QIA+G ++ LA+T G++Y++G+ +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRLIALQGF-CVLQIASGYAHSLALTDEGLLYAWGANT 261
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDS-SGYVYTWG--KGYCG 353
LG G + ++L P + T + + +V ++A H A + SG VY WG +G
Sbjct: 262 YGQLGTGNKSNQLSPVQVMTEKER---IVEIAACHSTHTSAAKTQSGQVYMWGQCRGQAI 318
Query: 354 ALGH 357
L H
Sbjct: 319 VLPH 322
Score = 173 (66.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 52/204 (25%), Positives = 91/204 (44%)
Query: 266 EEVGSVVQ---IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
+E+ S+ Q A + + +T + VY G + CLG G+ + P+ + K
Sbjct: 16 QELSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKK 75
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWG-KGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQV 380
+ + +G HV+ + G +Y WG GY LG+G P +S+ L+ +V
Sbjct: 76 LISLSYGSGP-HVLLVTEDGELYAWGHNGY-SQLGNGTTNQGVSPILVSTNLQGKRVTEV 133
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGL 439
+ L G V+ +G+ G +G G + PR + + L+ + I+ G
Sbjct: 134 SCGSHHSLALTHEGEVFAWGYNNCGQVG---SGSTANQPTPRKVSNCLQNKVIVNIACGQ 190
Query: 440 YHTVVVTDRGRLFGFGDNERAQLG 463
++ VTD G ++G+G N QLG
Sbjct: 191 TSSMAVTDNGEVYGWGYNGNGQLG 214
Score = 166 (63.5 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 53/194 (27%), Positives = 94/194 (48%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
+++ G +H+L +++ VF+ G + CG +G G Q N +V ++ +
Sbjct: 132 EVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQT 191
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+ V +G+V+ G N + G + + RL+ AL+G Q+ +G + LT
Sbjct: 192 SSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLI-ALQGFCVLQIASGYAHSLALTD 250
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVVY 291
G ++ G+NT+GQLG G+ ++ +P + + E +V+IAA S A T +G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSPVQV--MTEKERIVEIAACHSTHTSAAKTQSGQVY 308
Query: 292 SFGS--GSNFCLGH 303
+G G L H
Sbjct: 309 MWGQCRGQAIVLPH 322
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 307 (113.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 93/304 (30%), Positives = 142/304 (46%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
V +S + H A V +G+++ G N G ++T R +P V+ALK K
Sbjct: 40 VHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVR---KPTCVKALKPEKTKLAVC 96
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
G N T T +G+V+ G N+ GQLG GDT +R T I+ + Q+AAG A
Sbjct: 97 GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAA 156
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
VT +G ++ +G S +G ++ P + G V +S G H + G
Sbjct: 157 VTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV----GKPVSSISCGYYHSAFITGDGE 212
Query: 344 VYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
+YT+G+ G LG E K +P+P+ + + C + T VL +TG VY FG
Sbjct: 213 LYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEH-TVVLTETG-VYTFGL 270
Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV--TDRGRLFGFGDNER 459
+G LG V P+ + LR+H + ++ G HT V+ T+ G +F FGD
Sbjct: 271 GQYGQLGHGTLLFKTSV--PKSVKHLRSHKIHNVTCGESHTAVIADTENGLMFTFGDGRH 328
Query: 460 AQLG 463
+LG
Sbjct: 329 GKLG 332
Score = 267 (99.0 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 99/344 (28%), Positives = 153/344 (44%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 168
+ I+ G HT +++ N ++ GS+ G LG G + T CV + P +
Sbjct: 40 VHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALK---PEKTKLAV- 95
Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGV-PCKQVTAGLN 226
NH + G V+ G NS G DT R F L+ KQ+ AG
Sbjct: 96 -CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFH--LISFFTNQHKIKQLAAGSY 152
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVT 285
+ +T G + G N+ GQ+G D P + +VG V I+ G + +T
Sbjct: 153 TSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQV----DVGKPVSSISCGYYHSAFIT 208
Query: 286 GNGVVYSFGSGSNFCLGH-GEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
G+G +Y+FG N LG EQ + P+ + K V +V+ G EH V L +G
Sbjct: 209 GDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEK---VNKVACGGEHTVVLTETG- 264
Query: 344 VYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDT--GSVYGFG 400
VYT+G G G LGHG + KT +P+ + L+SH V + T V+ DT G ++ FG
Sbjct: 265 VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADTENGLMFTFG 324
Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
G LG + +++ P + + + V ++ G H +V
Sbjct: 325 DGRHGKLGLGEENFANQ-FDPALCSNFLSFTVLLVACGGCHMLV 367
Score = 222 (83.2 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 74/252 (29%), Positives = 123/252 (48%)
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPT-PKSIAPLEEVGSVVQIAAG 277
++ G T +T G ++ GSN GQLG G +T+ +PT K++ P E+ V G
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKP-EKTKLAV---CG 97
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVV 336
++ L T G VY+ G S LG G+ + I F + H ++ ++AG
Sbjct: 98 RNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQ--HKIKQLAAGSYTSA 155
Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
A+ G ++ WG G +G D+ ++P + K ++ C F+ D G +
Sbjct: 156 AVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSIS-CGYYHSAFITGD-GEL 213
Query: 397 YGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
Y FG G LG P++ + +V +P +L + V++++ G HTVV+T+ G ++ FG
Sbjct: 214 YTFGEPENGKLGLLPEQLKNSRVPQP-VLGIMEK--VNKVACGGEHTVVLTETG-VYTFG 269
Query: 456 DNERAQLGHDTL 467
+ QLGH TL
Sbjct: 270 LGQYGQLGHGTL 281
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 308 (113.5 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 90/274 (32%), Positives = 131/274 (47%)
Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
FC G D+ R + R R + G Q +G + L V +CG N+ GQLG
Sbjct: 3 FCWG-ADS-RELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQ 311
P+ I LE + V ++ G + LAV G V+++G+GS LG GE +
Sbjct: 60 AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
P+ I T I +++VS G H +AL V++WGK G LG G E + P+ +
Sbjct: 119 PKKIMTLN--DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
SL+ QV A +F L G+ +G+G G L R V + +P + +L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNL 236
Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
V IS G HT V+T G++F FGDN QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270
Score = 300 (110.7 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 94/311 (30%), Positives = 154/311 (49%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A ++Q ++ E H+ +L + +V +CGDNS G R R P ++AL+ + V+
Sbjct: 23 AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
G + + +G V G+ + GQLG G+ + TPK I L ++ ++Q++ G +
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
LA++ + V+S+G S+ LG G++ + P+ +++ +GI + +V+AG H AL
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198
Query: 341 SGYVYTWGKGYCGALG-HGDEIDKTLPEPLS--SLKSHLAVQVCARKRKTFVLVDTGSVY 397
G + WG G L G + +PLS +LK+ V + T VL G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 398 GFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRL--FG 453
FG G LG+ P L RI D L VSQI G YHT+ V G++ FG
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERI-DGL----VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 454 FGDNERAQLGH 464
G ++ ++ H
Sbjct: 314 HGPSDTSKPTH 324
Score = 251 (93.4 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 82/292 (28%), Positives = 130/292 (44%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
+Q +G H+LL+ +N V SCG + G LG G + + I V VS
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPE--PIQALETLIVDLVSCG 83
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ H+ V G+VF G S G + F P+ + L + QV+ G + L
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLAL 143
Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
+ V + G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ G
Sbjct: 144 SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLCGTS 202
Query: 291 YSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
+ +GS S L ++ +Q + + K + VV +S GD H L G V+T+G
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGD 262
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFG 400
G LG+ +K P+ + + L Q+ T V T G V FG
Sbjct: 263 NRSGQLGYSPTPEKRGPQLVERIDG-LVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 226 (84.6 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 81/295 (27%), Positives = 140/295 (47%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
++ G+ H+L + + VF+ G+ G LG G E + +SFT +I + ++QVS
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKE-ISFTPKKIMTLNDIKIIQVSCGH 137
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + + QVF+ G NS G P+ V +L+G+P QV AG + L+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
+ G GSN+ GQL G + P S+ L+ +G VV I+ G ++ +T +G
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG-VVYISCGDAHTAVLTQDGK 256
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V++FG + LG+ ++ P+ ++ R G+ V ++ G H +A YV+T G+
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVE--RIDGL-VSQIDCGSYHTLA-----YVHTTGQ 308
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
+ GHG D + P +L + + C + FV V ++ + F
Sbjct: 309 VV--SFGHGPS-DTSKPTHPEALTENFDIS-CLISAEDFVDVQVKHIFAGTYANF 359
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
Identities = 61/232 (26%), Positives = 102/232 (43%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P+K +L D+ Q+ H +S++ Q+ + N + + L + S V +
Sbjct: 119 PKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGK-NSHGQLGLGKEFPSQASPQRVRS 177
Query: 110 SAGN--MQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-- 164
G Q+ G H+ +S F GS+ G L S ++ + +
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTA 223
VV +S + H A + Q G+VFT GDN S G+ T P R P+LVE + G+ Q+
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPT--PEKRGPQLVERIDGL-VSQIDC 294
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPT-PKSIAPLEEVGSVV 272
G + T+ +VHT G GHG DT +PT P+++ ++ ++
Sbjct: 295 G----SYHTL-AYVHTTGQVV--SFGHGPSDT-SKPTHPEALTENFDISCLI 338
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 300 (110.7 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 76/255 (29%), Positives = 127/255 (49%)
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
++T V G N LG GD PK + L +++ S+ +GP ++L T +
Sbjct: 36 YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
GVVY++G LG+G + + P +Q I V+ V+ G H +AL + G ++
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLIKQVIEVACGSHHSMALAADGELFA 151
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
WG CG +G G ++ P +++ L + V + + + ++D+G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNG 211
Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
LG + G L P + +L V+QI G HT+ +TD G L+ +G N QLG
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 466 TLRGCLEPTEIFIQE 480
+ L PT+I +++
Sbjct: 269 SKNNLLSPTQIMVEK 283
Score = 247 (92.0 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 76/288 (26%), Positives = 130/288 (45%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A +V + +VF G N S C G D N+ P+ +EAL G K ++ G
Sbjct: 30 SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88
Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
LT G V+ G N + QLG+G T P + + V+++A G + +A+ +G
Sbjct: 89 LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
++++G + +G G ++ PR + VV ++ G +A+ SG VY WG
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G LG G+ ++ P +++L Q+ T L D G +Y +G +G LG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQIST--GLYHTVVVTDRGRLFGFG 455
G + +L P + + V +I+ + + T G ++ +G
Sbjct: 267 --TGSKNNLLSPTQI-MVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 235 (87.8 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 72/275 (26%), Positives = 112/275 (40%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N VF G + LG G + V ++ + +S S H + G V+
Sbjct: 40 NDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ I ++ L +V G + + L G + G N G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ + VV IA G + +AV +G VY +G N LG G
Sbjct: 159 QVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNN 218
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
++L P + G+ V ++ G H +AL G +Y WG G LG G + + P
Sbjct: 219 GNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSP 276
Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
+ K + + C + G VY +G
Sbjct: 277 TQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 189 (71.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 62/233 (26%), Positives = 112/233 (48%)
Query: 122 HTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + V ++ G + LG+G T Q ++ ++ N V++V+ +H+ +
Sbjct: 86 HVLLTTEDGVVYAWGHNGYSQLGNGT-TNQGIAPVQVCTNL-LIKQVIEVACGSHHSMAL 143
Query: 179 LQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
G++F G N+ G T N+P R ++ L + G + + G V
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPR-KVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G N +GQLG G+ ++ TP +A L + V QI G ++ LA+T G++Y++G+ +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGM-CVNQIVCGYAHTLALTDEGLLYAWGANT 261
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGK 349
LG G +++ L P I + + I + + H A + G +VY WG+
Sbjct: 262 YGQLGTGSKNNLLSPTQIMVEKERVIEIA--ACHSTHTSAAKTQGGHVYMWGQ 312
Score = 177 (67.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 57/195 (29%), Positives = 91/195 (46%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ +F+ G + CG +G G Q N VV ++ +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL SG+V+ G N + G + + P V AL G+ Q+ G T LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G + +P I + E V++IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 308 YMWGQCRGQSVILPH 322
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 305 (112.4 bits), Expect = 4.9e-24, P = 4.9e-24
Identities = 79/269 (29%), Positives = 134/269 (49%)
Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
+PR +EA G+ + +G + L V++CG N+ GQLG P+ P+
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEE--PI 75
Query: 266 EEVGSV-VQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKG 322
+ + +V + ++ G + +AV G V+++G+GS LG GE + P I + G
Sbjct: 76 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLA--G 133
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVC 381
I +++VS G H +AL G V++WG G LG G+ + + P+ + SL+ QV
Sbjct: 134 IKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVA 193
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLY 440
A +F L G+ +G+G G L ++++ +P + +L+ +V IS G
Sbjct: 194 AGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYE 253
Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
HT V+T+ G++F FG + QL H G
Sbjct: 254 HTSVLTEDGQVFTFGGSSSEQLQHSPRSG 282
Score = 290 (107.1 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 84/294 (28%), Positives = 140/294 (47%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
++ +G H+LL+ SN V+SCG + G LG P++T+ I S H+ VS
Sbjct: 31 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE-EPIQALSTVHIDLVSCG 89
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ H+ V G+VFT G S G ++ F P + +L G+ QV+ G + L
Sbjct: 90 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 149
Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
+ G V + GSN GQLG G+ L + +P+ + LE + + Q+AAG ++ A++ G
Sbjct: 150 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 208
Query: 291 YSFG---SGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
+ +G SG G+ + +++ +P +I K ++VV +S G EH L G V+T
Sbjct: 209 FGWGNNRSGQLALSGNSAKAEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFT 266
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
+G L H + P+ + + H++ C + TG V G
Sbjct: 267 FGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 320
Score = 272 (100.8 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 84/310 (27%), Positives = 148/310 (47%)
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD---TNRPIFRPRLVEA 212
R+ + +++ ++ E H+ + + +V++CGDNS G + T RP P ++A
Sbjct: 21 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE-EP--IQA 77
Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSV 271
L V V+ G + + +G V T G+ + GQLG G++ + P I L + +
Sbjct: 78 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KI 136
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSA 330
+Q++ G + LA++ +G V+S+GS LG G + P+ +++ +GI + +V+A
Sbjct: 137 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAA 194
Query: 331 GDEHVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTL-PEPLSSLKSHLAVQVCARKRK 386
G H AL G + WG G L G+ + ++ P + +LK+ V +
Sbjct: 195 GGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEH 254
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-V 445
T VL + G V+ FG L R P++++ + H VSQI G YHT+ V
Sbjct: 255 TSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGIGGH-VSQIECGSYHTIAYV 310
Query: 446 TDRGRLFGFG 455
G++ G
Sbjct: 311 YTTGQVVSLG 320
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 297 (109.6 bits), Expect = 8.1e-24, P = 8.1e-24
Identities = 77/255 (30%), Positives = 126/255 (49%)
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
++T V G N LG GD PK + L + + S+ +GP +L+ T +
Sbjct: 36 YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSL-SYGSGPHVLLS-TED 93
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
GVVY++G LG+G + + P IQ + VV V+ G H +AL + G ++
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLVKQVVEVACGSHHSMALAADGELFA 151
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
WG CG +G G ++ P +++ L + V + + + ++D+G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNG 211
Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
LG + G L P + +L V+QI G HT+ +TD G L+ +G N QLG
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 466 TLRGCLEPTEIFIQE 480
+ L PT+I +++
Sbjct: 269 SKNNLLSPTQIMVEK 283
Score = 248 (92.4 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 86/315 (27%), Positives = 141/315 (44%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A V +SASE A +V S +VF G N S C G D N+ P+ +EAL G K ++
Sbjct: 24 ACVFGISASE--AIYVTDSDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKRIKSLS 80
Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
G L+ G V+ G N + QLG+G T P + V VV++A G +
Sbjct: 81 YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHS 140
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+A+ +G ++++G + +G G ++ PR + VV ++ G +A+ S
Sbjct: 141 MALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-KVVNIACGQTSSMAVLDS 199
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
G VY WG G LG G+ ++ P +++L Q+ T L D G +Y +G
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST--GLYHTVVVTDRGRLFGFGD--N 457
+G LG G + +L P + + V +I+ + + T G ++ +G
Sbjct: 260 NTYGQLG---TGSKNNLLSPTQI-MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRG 315
Query: 458 ERAQLGHDTLRGCLE 472
+ L H T C +
Sbjct: 316 QSVILPHLTHFSCTD 330
Score = 233 (87.1 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 71/275 (25%), Positives = 112/275 (40%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
+ VF G + LG G + V ++ + +S S H + G V+
Sbjct: 40 SDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ I ++ L +V G + + L G + G N G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ + VV IA G + +AV +G VY +G N LG G
Sbjct: 159 QVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNN 218
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
++L P + G+ V ++ G H +AL G +Y WG G LG G + + P
Sbjct: 219 GNQLTPVRVAALH--GVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSP 276
Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
+ K + + C + G VY +G
Sbjct: 277 TQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 193 (73.0 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 64/233 (27%), Positives = 112/233 (48%)
Query: 122 HTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + V ++ G + LG+G T Q ++ ++ N VV+V+ +H+ +
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGT-TNQGIAPIQVCTNL-LVKQVVEVACGSHHSMAL 143
Query: 179 LQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
G++F G N+ G T N+P R ++ L + G + + G V
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPR-KVTNCLHTKKVVNIACGQTSSMAVLDSGEV 202
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G N +GQLG G+ ++ TP +A L V V QI G ++ LA+T G++Y++G+ +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGV-CVNQIVCGYAHTLALTDEGLLYAWGANT 261
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGK 349
LG G +++ L P I + + I + + H A + G +VY WG+
Sbjct: 262 YGQLGTGSKNNLLSPTQIMVEKERVIEIA--ACHSTHTSAAKTQGGHVYMWGQ 312
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 293 (108.2 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 85/285 (29%), Positives = 136/285 (47%)
Query: 203 PIFR---PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
PIF P+ + +++ C T+ N ++T V G N LG GD P
Sbjct: 37 PIFTLLSPQEIASIRKA-CVFGTSA-NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP 94
Query: 260 KSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
K + L +++ S+ +GP +L+ T +GVVY++G LG+G + + P IQ
Sbjct: 95 KKLEALCGKKIKSL-SYGSGPHVLLS-TEDGVVYAWGHNGYSQLGNGTTNQGIAP--IQV 150
Query: 318 FRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSH 375
I VV V+ G H +AL + G V+ WG CG +G G ++ P +++ L
Sbjct: 151 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 210
Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
V + + + ++D G VYG+G+ G G LG + G L P + +L + V+QI
Sbjct: 211 RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNG---NQLTPVRVAALHSVCVNQI 267
Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
G HT+ +TD G L+ +G N QLG L P I +++
Sbjct: 268 VCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK 312
Score = 242 (90.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 78/287 (27%), Positives = 129/287 (44%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A +V + +VF G N S C G D N+ P+ +EAL G K ++ G
Sbjct: 59 SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 117
Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
L+ G V+ G N + QLG+G T P + + VV++A G + +A+ +G
Sbjct: 118 LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 177
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+++G + +G G ++ PR + VV ++ G +A+ +G VY WG
Sbjct: 178 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK-RVVSIACGQTSSMAVLDNGEVYGWGY 236
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G LG G+ ++ P +++L S Q+ T L D G +Y +G +G LG
Sbjct: 237 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 295
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFG 455
G + +L P + + V + HT T G ++ +G
Sbjct: 296 --TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 240 (89.5 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 73/275 (26%), Positives = 113/275 (41%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N VF G + LG G + V ++ + +S S H + G V+
Sbjct: 69 NDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYA 127
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ I ++ L +V G + + L G V G N G
Sbjct: 128 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 187
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ + + VV IA G + +AV NG VY +G N LG G
Sbjct: 188 QVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN 247
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
++L P + + V ++ G H +AL G +Y WG G LG G++ + P
Sbjct: 248 GNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSP 305
Query: 367 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
+ K + + C + G VY +G
Sbjct: 306 AHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 195 (73.7 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 70/244 (28%), Positives = 117/244 (47%)
Query: 122 HTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + V ++ G + LG+G T Q ++ ++ N VV+V+ +H+ +
Sbjct: 115 HVLLSTEDGVVYAWGHNGYSQLGNGT-TNQGIAPIQVCTNL-LIKQVVEVACGSHHSMAL 172
Query: 179 LQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
G+VF G N+ G T N+P R ++ L + G + + G V
Sbjct: 173 AADGEVFAWGYNNCGQVGSGSTANQPTPR-KVTNCLHIKRVVSIACGQTSSMAVLDNGEV 231
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ G N +GQLG G+ ++ TP +A L V V QI G ++ LA+T G++Y++G+ +
Sbjct: 232 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANT 290
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDSSG-YVYTWG--KGYCG 353
LG G +++ L P I + + VV ++A H A + G +VY WG +G
Sbjct: 291 YGQLGTGNKNNLLSPAHIMVEKER---VVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 347
Query: 354 ALGH 357
L H
Sbjct: 348 TLPH 351
Score = 174 (66.3 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 58/195 (29%), Positives = 91/195 (46%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ VF+ G + CG +G G Q N VV ++ +
Sbjct: 160 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ 219
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL +G+V+ G N + G + + P V AL V Q+ G T LT
Sbjct: 220 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALT 278
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G+ + +P I + E VV+IAA S A T G V
Sbjct: 279 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 336
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 337 YMWGQCRGQSVTLPH 351
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 297 (109.6 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 85/300 (28%), Positives = 142/300 (47%)
Query: 168 VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
+S + H A V + +++ G N+ G + T + +P V+ALK K G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST---VSKPTCVKALKPEKVKFAACGR 96
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N T T G V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
+G ++ +G S +G + P+ + G + +S G H + + G +Y
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLY 212
Query: 346 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
T+G+ CG LG ++ ++ +P+P+ + + VQV T VL + +VY FG
Sbjct: 213 TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV-VQVACGGGHTVVLTEK-AVYTFGLGQ 270
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
FG LG V P+ ++ ++ +S I+ G HT ++TD G ++ FGD +LG
Sbjct: 271 FGQLGLGTFLFETSV--PKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328
Score = 238 (88.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 93/354 (26%), Positives = 154/354 (43%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
++ G HT +++ N+ ++ GS+ G LG G ++T T + V + NH
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKP-TCVKALKPEKVKFAACGRNH 98
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGV-PCKQVTAGLNFTGFLT 232
+ G+V+ G N+ G DT R F L+ KQ++AG N + LT
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFH--LISFFTSQRKIKQLSAGSNTSAALT 156
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVY 291
G + G N+ GQ+G + + P+ + VG + I+ G + VT G +Y
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVT----VGKPISWISCGYYHSAFVTTEGQLY 212
Query: 292 SFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
+FG LG Q + P+ + K VV+V+ G H V L VYT+G
Sbjct: 213 TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK---VVQVACGGGHTVVLTEKA-VYTFGL 268
Query: 350 GYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G G LG G + +T +P+ + +K + + T ++ D G +Y FG G LG
Sbjct: 269 GQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328
Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
+++ + P + + V +S G HT+V RL G + E ++
Sbjct: 329 LGLENSTNQFI-PTLCSNFLRFIVQLVSCGGCHTLVFATP-RLGGTEEMELKEI 380
Score = 168 (64.2 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 65/230 (28%), Positives = 104/230 (45%)
Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASE 172
Q++ G L + +F G + G +G T CV + P + +S
Sbjct: 144 QLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKP----ISWISCGY 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCK--QVTAGLNFTG 229
H+AFV GQ++T G+ CG N+ + R+ + + G+P K QV G T
Sbjct: 200 YHSAFVTTEGQLYTFGEPE---CGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTV 256
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT + V+T G GQLG G L + PK+I +++ + IA G ++ +T G
Sbjct: 257 VLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQ-KISFIACGENHTALITDMG 314
Query: 289 VVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVV 336
++Y+FG G + LG G ++ Q P F R + +V S G H +
Sbjct: 315 LMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLV--SCGGCHTL 362
Score = 152 (58.6 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 50/186 (26%), Positives = 76/186 (40%)
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
GSG+ F G Q E P + R + +S GDEH + + +Y +G G
Sbjct: 10 GSGAVFTFGK-TQFAENIPSKF--WFRNDVPTF-LSCGDEHTAVVTGNNKLYMFGSNNWG 65
Query: 354 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
LG G + + P + +LK + C R T V + G VY G G LG D
Sbjct: 66 QLGLGSKSTVSKPTCVKALKPEKVKFAACGRNH-TLVSTEGGKVYAAGGNNEGQLGLGDT 124
Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
S R + Q+S G + +T+ G LF +GDN Q+G + +
Sbjct: 125 EERSTFHLISFFTSQRK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCV 182
Query: 473 PTEIFI 478
P ++ +
Sbjct: 183 PQQVTV 188
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 291 (107.5 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 85/285 (29%), Positives = 136/285 (47%)
Query: 203 PIFR---PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
PIF P+ + +++ C T+ N ++T V G N LG GD P
Sbjct: 8 PIFTLLSPQEIASIRKA-CVFGTSA-NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP 65
Query: 260 KSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
K + L +++ S+ +GP +L+ T +GVVY++G LG+G + + P IQ
Sbjct: 66 KKLEALCGKKIKSL-SYGSGPHVLLS-TEDGVVYAWGHNGYSQLGNGTTNQGIAP--IQV 121
Query: 318 FRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSH 375
I VV V+ G H +AL + G V+ WG CG +G G ++ P +++ L
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
V + + + ++D G VYG+G+ G G LG + G L P + +L + V+QI
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNG---NQLTPVRVAALHSVCVNQI 238
Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
G HT+ +TD G L+ +G N QLG L P I +++
Sbjct: 239 VCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK 283
Score = 244 (91.0 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 82/306 (26%), Positives = 135/306 (44%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A +V + +VF G N S C G D N+ P+ +EAL G K ++ G
Sbjct: 30 SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88
Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
L+ G V+ G N + QLG+G T P + + VV++A G + +A+ +G
Sbjct: 89 LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+++G + +G G ++ PR + VV ++ G +A+ +G VY WG
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK-RVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G LG G+ ++ P +++L S Q+ T L D G +Y +G +G LG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGD--NERAQLGHDT 466
G + +L P + + V + HT T G ++ +G + L H T
Sbjct: 267 --TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPHLT 324
Query: 467 LRGCLE 472
C +
Sbjct: 325 HFSCTD 330
Score = 238 (88.8 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 73/275 (26%), Positives = 113/275 (41%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N VF G + LG G + V ++ + +S S H + G V+
Sbjct: 40 NDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ I ++ L +V G + + L G V G N G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ + + VV IA G + +AV NG VY +G N LG G
Sbjct: 159 QVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN 218
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
++L P + + V ++ G H +AL G +Y WG G LG G++ + P
Sbjct: 219 GNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSP 276
Query: 367 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
+ K + + C + G VY +G
Sbjct: 277 AHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 177 (67.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 59/195 (30%), Positives = 92/195 (47%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ VF+ G + CG +G G T Q N VV ++ +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL +G+V+ G N + G + + P V AL V Q+ G T LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G+ + +P I + E VV+IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 308 YMWGQCRGQSVVLPH 322
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 296 (109.3 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 86/275 (31%), Positives = 128/275 (46%)
Query: 207 PRLVEALKGV-PCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++ KG +QV AG +T+ ++T GS HGQLGHGD PK
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400
Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 318
+ L+ SV +++ G + + +T G +YSFGS CLG + + L+P + F
Sbjct: 401 HVEKLQGK-SVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
+ + +VS GD H++AL S VY+WG G G LG E D P+ + + V
Sbjct: 460 LNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIV 517
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGV-SDKVLR--P-----RILDSLR 428
VC +F+L TG V G LG G+ + + + P + L
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577
Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + IS G HT + +RGRL FG N+ QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612
Score = 197 (74.4 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 85/337 (25%), Positives = 143/337 (42%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
GS L G LGHG + + V +VS + + GQ+++ G + C
Sbjct: 381 GSKLHGQLGHGDRASYRQP-KHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGC 439
Query: 195 CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
G ++ + P LV+ P QV+ G + LT V++ G +G+LG
Sbjct: 440 LGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSE 499
Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE------ 305
D +P+ + ++ +V + G S++L +TG V + G + LG +
Sbjct: 500 DDVYSPQKVE-VQRGLCIVNVCCGSDGSFLLTLTGK--VLACGLNEHNKLGLNQYTAGII 556
Query: 306 QHDELQ--P--RAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
H+ Q P ++ ++ + +R +S G H A+D G + T+G CG LG GD
Sbjct: 557 NHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDY 616
Query: 361 ID----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-P-DRGV 414
L PL K + V C + T D ++ +G G G L P +R
Sbjct: 617 RKHLGINLLGGPLGG-KQVIRVS-CGDEFTTAATADN-HIFAWGNGGNGRLAMTPNERPQ 673
Query: 415 SDKVLR--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 448
+ PR I SL HHV+ +S +HT+++ ++
Sbjct: 674 GSDICTSWPRPIFGSL--HHVTDLSCRGWHTILIVEK 708
Score = 181 (68.8 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 64/255 (25%), Positives = 112/255 (43%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 172
+++ G T+ I++ ++S GS G LG ++ + ++F V QVS +
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + +S V++ G G D+ ++ P+ VE +G+ V G + + LT
Sbjct: 472 SHIMALTRSKSVYSWGCGEYGRLG-LDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLT 530
Query: 233 IRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSY 280
+ G V CG N H +LG H + P S+ +++ + I+ G ++
Sbjct: 531 LTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTH 590
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
A+ G + +FGS LG G+ L + G V+RVS GDE A +
Sbjct: 591 TAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFTTAATA 649
Query: 341 SGYVYTWGKGYCGAL 355
+++ WG G G L
Sbjct: 650 DNHIFAWGNGGNGRL 664
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 366
P+ + F+ G +V AGD H + +YTW G G LGHGD P
Sbjct: 341 PQKLDVFKG-GWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399
Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
+ + L+ +V T + D G +Y FG +G LG ++ +VL P ++D
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDF 458
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 479
V Q+S G H + +T ++ +G E +LG D+ P ++ +Q
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 296 (109.3 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 121/461 (26%), Positives = 191/461 (41%)
Query: 39 SKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQ 98
+K GSH PQ+ + SQ L ++ EL+++ + + + +
Sbjct: 169 AKKASGSHCNTPQRLGKVFSEVLSQTAVLKALSLD-------ELVHKPHTSPPETIEN-R 220
Query: 99 SVEHSSDIVETSAGNMQITT-----GRYHTLLISNSSVFSCGSSLC-GVLGHGPETTQCV 152
HSS V+TS ++ G L S VF G S+ G+LG G +
Sbjct: 221 PTNHSSPGVDTSKYSISSAVSSSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSS 280
Query: 153 S--FTRINFPSA--AHVV----QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
S T P +HV +S N+A V + GQ+++ G+ S GH + +
Sbjct: 281 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSY-V 339
Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI 262
P+L++ G + G T +T G ++ G H G LG G P I
Sbjct: 340 PHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 399
Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
E V I+ GP + VT G +++FG G+ LGHG++ PR ++ G
Sbjct: 400 LGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALN--G 457
Query: 323 IHVVRVSAGDEHVVAL-------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
++ + G H A+ SSG ++TWG G G LGHGD + +P ++ L +
Sbjct: 458 CRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTT 517
Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQ 434
QV + T L +G VY G P D V P ++ L V +
Sbjct: 518 SFQQVACGQSITVALSMSGQVYAMGTAD------PSH---DIVRAPSCIEGGLGKSFVQE 568
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEPT 474
++ G +H V+ + ++ +G QLGH DT C+ PT
Sbjct: 569 VACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCM-PT 608
Score = 276 (102.2 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 87/288 (30%), Positives = 128/288 (44%)
Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
V H I E + +++ G +HT ++ S + G G+LG G +
Sbjct: 339 VPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVR 398
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
+ +V +S H AFV G++FT GD + GH D PR VEAL G
Sbjct: 399 ILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI-PREVEALNG 457
Query: 216 VPCKQVTAG---------LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
C+ + A ++ G T G + T G G+LGHGD R P + L+
Sbjct: 458 --CRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELD 515
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHV 325
S Q+A G S +A++ +G VY+ G+ HD ++ P I+ K V
Sbjct: 516 TT-SFQQVACGQSITVALSMSGQVYAMGTAD-------PSHDIVRAPSCIEGGLGKSF-V 566
Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
V+ G H+ L+S VYTWGKG G LGHGD + +P + +LK
Sbjct: 567 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALK 614
Score = 206 (77.6 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 84/345 (24%), Positives = 141/345 (40%)
Query: 116 ITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASEN 173
I+ G Y L+ ++S G G LGHG V ++ V+++ E
Sbjct: 304 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHG--VCSYVPHPKLIDEFNGSTVELADCGEF 361
Query: 174 HAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGF 230
H V SG ++ GD +++ G + ++P R++ ++G+ K ++ G T F
Sbjct: 362 HTCAVTASGDLYAWGDGDHNAGLLG-LGSGASHWKPVRILGQMEGIYVKAISCGPWHTAF 420
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------ 284
+T G + T G T G LGHGD + P+ + L ++ + A G + AV
Sbjct: 421 VTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTI-KAACGVWHSAAVVSVFGE 479
Query: 285 -TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
T +G ++++G G + LGHG+ L P + +V+ G VAL SG
Sbjct: 480 ATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQ--QVACGQSITVALSMSGQ 537
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPL---SSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
VY A+G D + P L +V VL VY +G
Sbjct: 538 VY--------AMGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWG 589
Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
G LG D ++ P ++ +L+ V ++ G +T +
Sbjct: 590 KGSNGQLGHGD---TEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 168 (64.2 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 74/296 (25%), Positives = 120/296 (40%)
Query: 56 LVDLAASQLCALHS---IYAGMSRNVQIELLNRCNG--NWKRVLRFLQSVEHSSDIVETS 110
L D CA+ + +YA + LL +G +WK V R L +E +
Sbjct: 355 LADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPV-RILGQMEG----IYVK 409
Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
A I+ G +HT + S +F+ G G LGHG + + + + ++ +
Sbjct: 410 A----ISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIP-REVEALNGCRTIKAA 464
Query: 170 ASENHAAFVLQ-------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
H+A V+ SG++FT GD GH D + P V L +QV
Sbjct: 465 CGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLI-PSCVTELDTTSFQQVA 523
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
G + T L++ G V+ G+ H D + P+ I V ++A G ++
Sbjct: 524 CGQSITVALSMSGQVYAMGT---ADPSH-DIVRAPS--CIEGGLGKSFVQEVACGFHHIA 577
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ VY++G GSN LGHG+ P ++ KG V +V G + +
Sbjct: 578 VLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKAL--KGKQVRKVVCGSNYTATI 631
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 291 (107.5 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 85/293 (29%), Positives = 129/293 (44%)
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
SAGN + Y T+ N +F G++ CG LG G + + R++ + + +S
Sbjct: 53 SAGNEVL----YTTV---NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLS 104
Query: 170 -ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
S H G+VFT G N+ G+ TN + + L +V G +
Sbjct: 105 YGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS 164
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V G N GQ+G G T+++P P+ + + VV IA G +AV G
Sbjct: 165 LVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTG 224
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
VY +G N LG G + QP + +GI V RV+ G H + L G VY WG
Sbjct: 225 EVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
G LG G++ +++ P P++ K + + C + G VY +G
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 287 (106.1 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 80/282 (28%), Positives = 134/282 (47%)
Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90
Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ L + + + +GP +LA T G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 378
V+ V+ G H + L S G V+ WG G +G G +++ +P ++ L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
+ + +VDTG VY +G+ G G LG + G R L +R V +++ G
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307
Score = 246 (91.7 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 73/274 (26%), Positives = 123/274 (44%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
N + + ++F G N C G D I PR +++L G + C +G +
Sbjct: 56 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
+++G ++ +G G ++ PR + + + VV ++ G +A+ +G VY WG
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
G LG G+ ++ P +++L+ +V T VL D G VY +G +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 411 DRGVSD-----KVLRPRILDSLRAH--HVSQIST 437
++ V + RI++ H H S T
Sbjct: 293 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKT 326
Score = 213 (80.0 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 64/234 (27%), Positives = 110/234 (47%)
Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
+G + L + VF+ G + LG+G V S V++V+ H+
Sbjct: 107 SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 166
Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ G+VF G N+S G T N+PI R R+ L+ + G + G
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTVNQPIPR-RVTGCLQNKVVVTIACGQMCCMAVVDTGE 225
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V+ G N +GQLG G++ ++PTP +A L+ + V ++A G ++ L +T G VY++G+
Sbjct: 226 VYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI-RVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGK 349
S LG G + ++ P + + + I + + H A + G +VY WG+
Sbjct: 285 SYGQLGTGNKSNQSYPTPVTVEKDRIIEIA--ACHSTHTSAAKTQGGHVYMWGQ 336
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 250 (93.1 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 86/284 (30%), Positives = 135/284 (47%)
Query: 221 VTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHG--------DTLDR------PTPKSIAP 264
V G +FT +L T + T G +GQLGHG D+ R P PK+IA
Sbjct: 172 VACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIAS 231
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
L ++V++A G ++ +AV NG VY++G G LGH EQ DE PR I F+R +
Sbjct: 232 LAGE-TIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVL 290
Query: 325 VVR--VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+SAG + G +Y WGK +GD D P+P+ L + +
Sbjct: 291 PPNAILSAGSANSACTAGGGQLYMWGK----IKNNGD--DWMYPKPMMDLSGWNLRWMDS 344
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
FV D+ + +G +G LG+ G P+ +D L HV ++ G H+
Sbjct: 345 GSMHHFVGADSSCI-SWGHAQYGELGYGPNGQKSSAA-PKKVDMLEGMHVMGVACGFCHS 402
Query: 443 VVVTDRGRLFGFGDN-ERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
+V+ DR + D E+ ++ +D +G LE + ++E++E+T
Sbjct: 403 MVIVDRTDI---ADRLEQLEV-YDG-KGSLEES---VEEVKEET 438
Score = 193 (73.0 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 50/151 (33%), Positives = 71/151 (47%)
Query: 322 GIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
G+++ V+ G H VALD G YTWG+ G LGHGD I + P +S L H V+
Sbjct: 55 GVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVK 114
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRILDSLRAHHVSQIST 437
A + T V+ D G GFGW +G LG G + L + + V+ ++
Sbjct: 115 AAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVAC 174
Query: 438 GLYHTVVV--TDRGRLFGFGDNERAQLGHDT 466
G TV + T+ + G + QLGH T
Sbjct: 175 GADFTVWLSSTEGASILTAGLPQYGQLGHGT 205
Score = 146 (56.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 70/277 (25%), Positives = 116/277 (41%)
Query: 180 QSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF-LTIRG 235
+ G++ CG + G R + P + L GV + V G +F L + G
Sbjct: 18 KGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEG 77
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
+T G N GQLGHGD + R P ++ L + +V+ AAG ++ + V+ +G FG
Sbjct: 78 RCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSK-HKIVKAAAGRNHTVVVSDDGQSLGFGW 136
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGI---HVVRVSAGDEHVVALDSS--GYVYTWGKG 350
LG G + +++ + V V+ G + V L S+ + T G
Sbjct: 137 NKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLP 196
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQ-----VCARKRKTFVLVDTGSV--------- 396
G LGHG + + + + SS++ Q + + +T V V G+
Sbjct: 197 QYGQLGHGTDNEFNMKD--SSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNG 254
Query: 397 YGFGWMGFGSLG-FPDRGVSDKVLRPRILDSLRAHHV 432
Y + W GFG G R D+ PR +D + ++V
Sbjct: 255 YVYTW-GFGGYGRLGHREQKDE-WAPRRIDVFQRNNV 289
Score = 139 (54.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 50/194 (25%), Positives = 87/194 (44%)
Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
RP+ + +L G +V G N T + G+V+T G +G+LGH + D P+ I
Sbjct: 225 RPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVF 284
Query: 266 EEVGSVVQ----IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ +V+ ++AG + G G +Y +G N +G+ D + P+ +
Sbjct: 285 QR-NNVLPPNAILSAGSANSACTAGGGQLYMWGKIKN----NGD--DWMYPKPMMDL--S 335
Query: 322 GIHVVRVSAGD-EHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAV 378
G ++ + +G H V DSS +WG G LG+G K+ P+ + L+ +
Sbjct: 336 GWNLRWMDSGSMHHFVGADSS--CISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVM 393
Query: 379 QVCARKRKTFVLVD 392
V + V+VD
Sbjct: 394 GVACGFCHSMVIVD 407
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 52/210 (24%), Positives = 86/210 (40%)
Query: 271 VVQIAAGPSYM--LAVTGNGVVYSFGSGSNFCLGHGEQHD------------ELQPRAIQ 316
V +A G + L+ T + + G LGHG ++ E QPR
Sbjct: 169 VTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKA 228
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
G +V+V+ G H VA+D +GYVYTWG G G LGH ++ D+ P + + +
Sbjct: 229 IASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNN 288
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF--PDRGVSDKVLRPRILDSLRAHHVSQ 434
+ A ++ GS G G L + D + P+ + L ++
Sbjct: 289 VLPPNA-------ILSAGSANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRW 341
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
+ +G H V D + +G + +LG+
Sbjct: 342 MDSGSMHHFVGADSSCI-SWGHAQYGELGY 370
Score = 86 (35.3 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 41/147 (27%), Positives = 61/147 (41%)
Query: 116 ITTG--RYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+ TG +H + + ++ G + G LGHG + Q T ++ S +V+ +A
Sbjct: 61 VATGCASFHCVALDVEGRCYTWGRNEKGQLGHG-DMIQRDRPTVVSGLSKHKIVKAAAGR 119
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC---KQVT---AGLN 226
NH V GQ G N G VE+ +PC +VT G +
Sbjct: 120 NHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVE-VESTP-LPCVVSDEVTNVACGAD 177
Query: 227 FTGFL--TIRGHVHTCGSNTHGQLGHG 251
FT +L T + T G +GQLGHG
Sbjct: 178 FTVWLSSTEGASILTAGLPQYGQLGHG 204
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 290 (107.1 bits), Expect = 5.3e-23, P = 5.3e-23
Identities = 79/255 (30%), Positives = 123/255 (48%)
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
++T V G N LG GD PK + L +++ S+ +GP +L+ T +
Sbjct: 36 YVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
GVVY++G LG+G + L P IQ I VV V+ G H +AL + G V+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
WG CG +G G ++ P +++ L V + + + ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211
Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
LG + G L P + +L + V+QI G HT+ +TD G L+ +G N QLG
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 466 TLRGCLEPTEIFIQE 480
L P I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283
Score = 244 (91.0 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 78/288 (27%), Positives = 130/288 (45%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A +V S +VF G N S C G D N P+ +EAL G K ++ G
Sbjct: 30 SANEALYVTDSDEVFVFGLNYSSCLGTGD-NHSTLVPKKLEALCGKKIKSLSYGSGPHVL 88
Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
L+ G V+ G N + QLG+G T P + + VV++A G + +A+ +G
Sbjct: 89 LSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+++G + +G G ++ PR + VV ++ G +A+ +G VY WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK-RVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G LG G+ ++ P +++L S Q+ T L D G +Y +G +G LG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQIST--GLYHTVVVTDRGRLFGFG 455
G + +L P + + V +I+ + + T G ++ +G
Sbjct: 267 --TGNKNNLLSPAHI-MVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 234 (87.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 74/286 (25%), Positives = 118/286 (41%)
Query: 118 TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
T L +++S VF G + LG G + V ++ + +S S H
Sbjct: 29 TSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVP-KKLEALCGKKIKSLSYGSGPHV 87
Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
+ G V+ G N G+ TN+ + ++ L +V G + + L G
Sbjct: 88 LLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V G N GQ+G G T ++PTP+ + + VV IA G + +AV NG VY +G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
N LG G ++L P + + V ++ G H +AL G +Y WG G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265
Query: 356 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
G G++ + P + K + + C + G VY +G
Sbjct: 266 GTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 194 (73.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 68/253 (26%), Positives = 117/253 (46%)
Query: 122 HTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFV 178
H LL + V ++ G + LG+G T Q ++ ++ N VV+V+ +H+ +
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGT-TNQGLAPIQVCTNL-LIKQVVEVACGSHHSMAL 143
Query: 179 LQSGQVFT-----CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
G+VF CG S ++ T R + ++ + G+ C Q ++ L
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSS----MAVLD- 198
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V+ G N +GQLG G+ ++ TP +A L V V QI G ++ LA+T G++Y++
Sbjct: 199 NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAW 257
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--KGY 351
G+ + LG G +++ L P I + + I + + A G+VY WG +G
Sbjct: 258 GANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSA-AKTQGGHVYMWGQCRGQ 316
Query: 352 CGALGHGDEIDKT 364
L H + T
Sbjct: 317 SVTLPHLTHLSST 329
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 295 (108.9 bits), Expect = 6.2e-23, P = 6.2e-23
Identities = 87/276 (31%), Positives = 127/276 (46%)
Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++A+K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 369 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPK 428
Query: 261 SIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQT 317
+ L+ G + Q++ G + + +T G +Y+FGS C+G + + + L+P +
Sbjct: 429 HVEKLQ--GKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDF 486
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
F + +VS GD HV L + VYTWG G G LG E D P+ + K+
Sbjct: 487 FLTNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNI 544
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGV--SDKVLR-P-----RILDSL 427
V V TF+L TG V G F LG G+ D P + L
Sbjct: 545 VSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQL 604
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + IS G HT + +RGRL FG N+ QLG
Sbjct: 605 SFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 640
Score = 214 (80.4 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 92/380 (24%), Positives = 151/380 (39%)
Query: 88 GNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPE 147
G K + L +++ + AGN L + ++ G+ L G LGHG
Sbjct: 363 GGGKSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQG-GTKLHGQLGHGDR 421
Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFR 206
+ + + QVS ++ + GQ++ G + C G + +
Sbjct: 422 ASYRQP-KHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLE 480
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P ++ P +QV+ G N LT V+T G +G+LG D TP+ + +
Sbjct: 481 PLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKV-DVP 539
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS------GSNFCLGHGEQHDEL--QPRAIQ-T 317
+ ++V + G +T G V + G G N C HD P A T
Sbjct: 540 KTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLT 599
Query: 318 FRRK-GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS--LK 373
++ + +R +S G H ++D G + T+G CG LG GD K L L + L
Sbjct: 600 LAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGD-YKKHLGINLLAGPLG 658
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-P-DRGVSDKVLR--PR-ILDSLR 428
++V T D ++ +G G G L P +R + PR I SL
Sbjct: 659 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFGSL- 717
Query: 429 AHHVSQISTGLYHTVVVTDR 448
HHV +S +HT++V ++
Sbjct: 718 -HHVPDLSCRGWHTIIVVEK 736
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 91/344 (26%), Positives = 141/344 (40%)
Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC-----GDNSSFCC 195
V G G T Q + + S QV A H A V +++T G
Sbjct: 361 VWGGGKSTPQKLDAIK----SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQL 416
Query: 196 GHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
GH D R +R P+ VE L+G +QV+ G +FT +T G ++ GS+ +G +G +
Sbjct: 417 GHGD--RASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIG----I 470
Query: 255 DRPTPKSIA-PLEE----VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
D+ + PL+ V Q++ G +++ +T N VY++G G LG + D
Sbjct: 471 DKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDH 530
Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-----HGDEIDKT 364
P+ + K +++V V G + L +G V G LG G T
Sbjct: 531 YTPQKVDV--PKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDT 588
Query: 365 LPEPLSSLKSHLAVQVCARKRKTFV--LVDTGSVYGFG-WMGFGSLGFPDRGVSD--KVL 419
E + LA Q+ K +T T S+ G + FGS GV D K L
Sbjct: 589 YCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHL 648
Query: 420 RPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
+L L V ++S G T+ TD +F +G+ +L
Sbjct: 649 GINLLAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 692
Score = 170 (64.9 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
+ G +V AG+ H + +YTW G G LGHGD P+ + L+
Sbjct: 376 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQG 435
Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
QV T + D G +Y FG +G +G D+ +VL P LD + V Q
Sbjct: 436 KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGI-DKAYGSEVLEPLQLDFFLTNPVEQ 494
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
+S G H V+T ++ +G E +LG D+ P ++
Sbjct: 495 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKV 536
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 289 (106.8 bits), Expect = 8.0e-23, P = 8.0e-23
Identities = 80/283 (28%), Positives = 136/283 (48%)
Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90
Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
+ L +++ S+ +GP +LA T +G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLA 377
V+ V+ G H + L S G V+ WG G +G G ++ +P ++ L++ +
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
+ + + + +VDTG VY +G+ G G LG G R L +R V +++
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264
Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
G HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307
Score = 275 (101.9 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 82/293 (27%), Positives = 126/293 (43%)
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
SAGN + Y T+ N +F G++ G LG G + + R++ + + +S
Sbjct: 53 SAGNEVL----YTTV---NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLS 104
Query: 170 -ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
S H G+VFT G N+ G+ TN + + L +V G +
Sbjct: 105 YGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS 164
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V G N GQ+G G T ++P P+ + + V+ IA G +AV G
Sbjct: 165 LVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTG 224
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
VY +G N LG G + QP + +GI V RV+ G H + L G +Y WG
Sbjct: 225 EVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
G LG G++ +++ P P+ K + + C + G VY +G
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 241 (89.9 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 75/304 (24%), Positives = 134/304 (44%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 231
N + + ++F G N S C G D I PR +++L G ++ G
Sbjct: 56 NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 114
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
++G ++ +G G ++ PR + + + V+ ++ G +A+ +G VY WG
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LG G ++ P +++L+ +V T VL D G +Y +G +G LG +
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 293
Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGD--NERAQLGHDTLR 468
+ + P +++ R ++ + HT T G ++ +G + L H T
Sbjct: 294 KS-NQSYPTPVVVEKDRIIEIAACHSA--HTSAAKTQGGHVYMWGQCRGQSVILPHHTHF 350
Query: 469 GCLE 472
C +
Sbjct: 351 CCTD 354
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 294 (108.6 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 94/321 (29%), Positives = 153/321 (47%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V +S HAA V + G+VF G+ +S G + N I P+ VE+L+ V + V
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLK-VNIDIDHPKRVESLEDVAVRSVACS 352
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEV--GS--VVQIAAGPS 279
+ T +T G ++ G + G T+++ + + + +V GS V+ +A G
Sbjct: 353 DHQTCAVTESGELYLWGID-------GGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAW 405
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 338
+ VT +G ++++GSG+ LGHG +P+ +++ RR + V+ VS G H A+
Sbjct: 406 HTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRR--MKVISVSCGPWHTAAIV 463
Query: 339 ----D-------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
D S G ++TWG G G LGH D K +P ++ L H ++V T
Sbjct: 464 ETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLT 523
Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
L +G+VY G G LG P DK + +L +L V I++G +H V+T
Sbjct: 524 VALSISGTVYTMGSSIHGQLGCPR--AKDKSVNV-VLGNLTRQFVKDIASGSHHVAVLTS 580
Query: 448 RGRLFGFGDNERAQLGHDTLR 468
G ++ +G QLG +R
Sbjct: 581 FGNVYTWGKGMNGQLGLGDVR 601
Score = 230 (86.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 81/282 (28%), Positives = 131/282 (46%)
Query: 49 YPQKFRSLVDLAA-SQLCALHSIYAGMSRNVQIELLNRCNGNWKRV-LRFLQSVEHSSDI 106
+P++ SL D+A S C+ H A ++ + ++ L G ++ +FL SD+
Sbjct: 334 HPKRVESLEDVAVRSVACSDHQTCA-VTESGELYLWGIDGGTIEQSGSQFL--TRKISDV 390
Query: 107 VETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP-ETT----QCVSFTRINFP 160
+ S + + G +HT ++++S +F+ GS GVLGHG E+ + S R+
Sbjct: 391 LGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVI 450
Query: 161 SAA----HVVQVSASENHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
S + H + + N F G++FT GD GH D+ R + P V L
Sbjct: 451 SVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLV-PTCVTELI 509
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+V+ G T L+I G V+T GS+ HGQLG D+ + L V I
Sbjct: 510 DHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQ-FVKDI 568
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
A+G ++ +T G VY++G G N LG G+ D P ++
Sbjct: 569 ASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVE 610
Score = 218 (81.8 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 74/278 (26%), Positives = 118/278 (42%)
Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
G ++ N + P+L+E+ + ++ G +T +G V G+ G+LG +D
Sbjct: 273 GSKNQNDAL-SPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNID 331
Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
PK + LE+V +V +A AVT +G +Y +G G Q R I
Sbjct: 332 IDHPKRVESLEDV-AVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQ---FLTRKI 387
Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
+ V+ V+ G H + SSG ++T+G G G LGHG T P+ + SL+
Sbjct: 388 SDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRM 447
Query: 376 LAVQVCARKRKTFVLVDTGS---VYG-------FGWMGFGSLGFPDRGVSDKVLRPRILD 425
+ V T +V+T + Y F W G G G S + L P +
Sbjct: 448 KVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTW-GDGDKGRLGHADSKRKLVPTCVT 506
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
L H ++S G TV ++ G ++ G + QLG
Sbjct: 507 ELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLG 544
Score = 215 (80.7 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 66/220 (30%), Positives = 102/220 (46%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+ V+ H A V SGQ+FT G + GH + +P+ VE+L+ + V+ G
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLES-VTKPKEVESLRRMKVISVSCG 455
Query: 225 ----------LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
N F + G + T G G+LGH D+ + P + L + +
Sbjct: 456 PWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELID-HDFI 514
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
+++ G + +A++ +G VY+ GS + LG D+ + R+ V +++G
Sbjct: 515 KVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQ--FVKDIASGS 572
Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPL 369
HV L S G VYTWGKG G LG GD D+ P EPL
Sbjct: 573 HHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPL 612
Score = 180 (68.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 50/176 (28%), Positives = 83/176 (47%)
Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
G Q+D L P+ +++ V +S G +H + G V+ WG G G LG I
Sbjct: 273 GSKNQNDALSPKLLESATM--FDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNI 330
Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
D P+ + SL+ V +T + ++G +Y +G G G++ ++ S + R
Sbjct: 331 DIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG-GTI---EQSGSQFLTR- 385
Query: 422 RILDSLRAH-HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
+I D L V ++ G +HT +VT G+LF +G LGH +L +P E+
Sbjct: 386 KISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEV 441
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 60/219 (27%), Positives = 104/219 (47%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
V I+ G + VT G V+ +G+G++ LG D P+ +++ + + V V+
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESL--EDVAVRSVAC 351
Query: 331 GDEHVVALDSSGYVYTWG-KGYCGALGH-GDE-IDKTLPEPLSSLKSHLAVQVCARKRKT 387
D A+ SG +Y WG G G + G + + + + + L + L+V C T
Sbjct: 352 SDHQTCAVTESGELYLWGIDG--GTIEQSGSQFLTRKISDVLGGSLTVLSV-ACGAWH-T 407
Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT- 446
++ +G ++ +G FG LG G + V +P+ ++SLR V +S G +HT +
Sbjct: 408 AIVTSSGQLFTYGSGTFGVLG---HGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVE 464
Query: 447 ---DR--------GRLFGFGDNERAQLGHDTLRGCLEPT 474
DR G+LF +GD ++ +LGH + L PT
Sbjct: 465 TANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPT 503
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 288 (106.4 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 77/255 (30%), Positives = 123/255 (48%)
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
++T V G N LG GD PK + L +++ S+ +GP +L+ T +
Sbjct: 36 YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
GVVY++G LG+G + + P +Q I VV V+ G H +AL + G V+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
WG CG +G G ++ P +++ L V + + + ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211
Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
LG + G L P + +L + V+QI G HT+ +TD G L+ +G N QLG
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 466 TLRGCLEPTEIFIQE 480
L P I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283
Score = 239 (89.2 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 85/314 (27%), Positives = 138/314 (43%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A V SASE A +V + +VF G N S C G D N+ P+ +E L G K ++
Sbjct: 24 ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80
Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
G L+ G V+ G N + QLG+G T P + + VV++A G +
Sbjct: 81 YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHS 140
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+A+ +G V+++G + +G G ++ PR + VV ++ G +A+ +
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK-RVVGIACGQTSSMAVLDN 199
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
G VY WG G LG G+ ++ P +++L S Q+ T L D G +Y +G
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGD--NE 458
+G LG G + +L P + + V + HT T G ++ +G +
Sbjct: 260 NTYGQLG---TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQ 316
Query: 459 RAQLGHDTLRGCLE 472
L H T C +
Sbjct: 317 SVILPHLTHFSCTD 330
Score = 238 (88.8 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 73/275 (26%), Positives = 113/275 (41%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N VF G + LG G + V ++ + +S S H + G V+
Sbjct: 40 NDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ I ++ L +V G + + L G V G N G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ + + VV IA G + +AV NG VY +G N LG G
Sbjct: 159 QVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN 218
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
++L P + + V ++ G H +AL G +Y WG G LG G++ + P
Sbjct: 219 GNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSP 276
Query: 367 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
+ K + + C + G VY +G
Sbjct: 277 AHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 172 (65.6 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 58/195 (29%), Positives = 91/195 (46%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ VF+ G + CG +G G Q N VV ++ +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL +G+V+ G N + G + + P V AL V Q+ G T LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G+ + +P I + E VV+IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307
Query: 291 YSFGS--GSNFCLGH 303
Y +G G + L H
Sbjct: 308 YMWGQCRGQSVILPH 322
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 293 (108.2 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 68/206 (33%), Positives = 110/206 (53%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q++ + H+ + GQ+F G+N+ G R P+ +++L G+P Q++AG
Sbjct: 118 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAG 177
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
N + L++ G V GSN+ GQLG GDT DR P + L V I+ G + +
Sbjct: 178 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGK-KTVSISCGGEHTATL 236
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGY 343
+ G V++FGSG LGH DE PR + G V +V+ G H + DSS
Sbjct: 237 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVFEDSSNQ 294
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPL 369
+Y++G G G LG+G+++ +++P P+
Sbjct: 295 IYSFGCGMQGQLGNGEQVKQSVPLPV 320
Score = 261 (96.9 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 69/205 (33%), Positives = 104/205 (50%)
Query: 264 PLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRR 320
PL+ E V+QIA G + +A+T +G ++ +G + LG EQ P+ +Q+
Sbjct: 109 PLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLC- 167
Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
GI V ++SAG H L SG V+ WG G LG GD D+ +P + SL V +
Sbjct: 168 -GIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSI 226
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
T L G+V+ FG GFG LG + D+ PR++ L VSQ++ G +
Sbjct: 227 SCGGEHTATLSKGGTVFTFGSGGFGQLGH--NSLKDEH-HPRLVAELWGSKVSQVTCGRH 283
Query: 441 HTVVVTDRG-RLFGFGDNERAQLGH 464
HT+V D +++ FG + QLG+
Sbjct: 284 HTLVFEDSSNQIYSFGCGMQGQLGN 308
Score = 220 (82.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 75/230 (32%), Positives = 105/230 (45%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QI G H++ ++N +F G + G LG E S + V Q+SA
Sbjct: 119 IQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAGG 178
Query: 173 NHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH+ FVL SG VF G NS+ G DT F P +V++L G ++ G T L
Sbjct: 179 NHS-FVLSLSGVVFGWGSNSAGQLGLGDTTDR-FIPTIVKSLSGKKTVSISCGGEHTATL 236
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT-GNGV 289
+ G V T GS GQLGH D P+ +A L GS V Q+ G + L +
Sbjct: 237 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVFEDSSNQ 294
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVAL 338
+YSFG G LG+GEQ + P + + ++ AG+ H AL
Sbjct: 295 IYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIAGENHSFAL 344
Score = 212 (79.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 67/217 (30%), Positives = 101/217 (46%)
Query: 213 LKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEV 268
LKG+ +QV G + LT G + G N GQLG + +P+ + L +
Sbjct: 110 LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGI 169
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
V QI+AG ++ ++ +GVV+ +GS S LG G+ D P +++ G V +
Sbjct: 170 -PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSL--SGKKTVSI 226
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
S G EH L G V+T+G G G LGH D+ P ++ L QV + T
Sbjct: 227 SCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTL 286
Query: 389 VLVDTGS-VYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
V D+ + +Y FG G LG ++ V V P +L
Sbjct: 287 VFEDSSNQIYSFGCGMQGQLGNGEQ-VKQSVPLPVLL 322
Score = 200 (75.5 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 48/145 (33%), Positives = 76/145 (52%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCAR 383
V++++ GD+H +AL + G ++ WG+ G LG ++ P+ L SL Q+ A
Sbjct: 118 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAG 177
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
+FVL +G V+G+G G LG D +D+ + P I+ SL IS G HT
Sbjct: 178 GNHSFVLSLSGVVFGWGSNSAGQLGLGD--TTDRFI-PTIVKSLSGKKTVSISCGGEHTA 234
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLR 468
++ G +F FG QLGH++L+
Sbjct: 235 TLSKGGTVFTFGSGGFGQLGHNSLK 259
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 290 (107.1 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 68/206 (33%), Positives = 111/206 (53%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q++ + H+ + GQ+F G+N+ G R PR +++L G+P Q++AG
Sbjct: 120 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAG 179
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
N + L++ G V G N+ GQLG GDT DR P + L+ +V I+ G + A+
Sbjct: 180 GNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRK-KIVSISCGGEHTAAL 238
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGY 343
G V++FGSG LGH DE PR + G V +V+ G H +V+ S
Sbjct: 239 AKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELW--GSKVSQVTCGRNHTLVSTASPKL 296
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPL 369
+Y++G G G LG+G+++ +++P P+
Sbjct: 297 IYSFGCGMQGQLGNGEQVKQSVPLPV 322
Score = 264 (98.0 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 75/215 (34%), Positives = 109/215 (50%)
Query: 254 LDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDEL 310
+D+ T S PL+ E V+QIA G + +A+T +G ++ +G + LG EQ
Sbjct: 103 MDKSTECS--PLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQ 160
Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
PR +Q+ GI V ++SAG H L SG V+ WG G LG GD D+ +P ++
Sbjct: 161 SPRHLQSLC--GIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVN 218
Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
SLK V + T L G+V+ FG GFG LG D+ PR++ L
Sbjct: 219 SLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGH--NSFKDEH-HPRLVAELWGS 275
Query: 431 HVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLGH 464
VSQ++ G HT+V T +L + FG + QLG+
Sbjct: 276 KVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGN 310
Score = 227 (85.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 77/231 (33%), Positives = 107/231 (46%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QI G H++ ++N +F G + G LG E S + V Q+SA
Sbjct: 121 IQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGG 180
Query: 173 NHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH+ FVL SG VF G NS+ G DT F P +V +LK ++ G T L
Sbjct: 181 NHS-FVLSLSGVVFGWGGNSAGQLGLGDTTDR-FVPTVVNSLKRKKIVSISCGGEHTAAL 238
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNG-V 289
G V T GS GQLGH D P+ +A L GS V Q+ G ++ L T + +
Sbjct: 239 AKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELW--GSKVSQVTCGRNHTLVSTASPKL 296
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ--TFRRKGIHVVRVSAGDEHVVAL 338
+YSFG G LG+GEQ + P + T + ++ AG+ H AL
Sbjct: 297 IYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFAL 347
Score = 199 (75.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 46/145 (31%), Positives = 76/145 (52%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCAR 383
V++++ GD+H +AL + G ++ WG+ G LG ++ P L SL Q+ A
Sbjct: 120 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAG 179
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
+FVL +G V+G+G G LG D +D+ + P +++SL+ + IS G HT
Sbjct: 180 GNHSFVLSLSGVVFGWGGNSAGQLGLGD--TTDRFV-PTVVNSLKRKKIVSISCGGEHTA 236
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLR 468
+ G +F FG QLGH++ +
Sbjct: 237 ALAKGGTVFTFGSGGFGQLGHNSFK 261
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 284 (105.0 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 82/286 (28%), Positives = 137/286 (47%)
Query: 203 PIFR---PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
PIF P+ + +++ C T+ N + T V G N LG GD+ P
Sbjct: 8 PIFTLLSPQEIASIRKA-CVFGTSA-NEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVP 65
Query: 260 KSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
K + L +++ S+ +GP ++L T +G VY++G LG+G + + P + T
Sbjct: 66 KKLEALCGKKISSL-SYGSGP-HVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCT 123
Query: 318 --FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKS 374
+K V+ V+ G H +AL G +Y WG CG +G G ++ P +S+ L+
Sbjct: 124 NLLLKK---VIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQD 180
Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
+ V + + + +V+ G VYG+G+ G G LG + G L P + +L + Q
Sbjct: 181 KMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNG---NQLTPCRVAALHGVCILQ 237
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
I+ G HT+ +TD G L+ +G N QLG L P +I +++
Sbjct: 238 IACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEK 283
Score = 260 (96.6 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 71/275 (25%), Positives = 122/275 (44%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N VF G + LG G + V ++ + +S S H + G+V+
Sbjct: 40 NDEVFVFGLNCSNCLGTGDSQSTIVP-KKLEALCGKKISSLSYGSGPHVLLCTEDGEVYA 98
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G+ TN+ + ++ L +V G + + L+ G ++ G N G
Sbjct: 99 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 158
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++PTP+ ++ + VV IA G + +AV NG VY +G N LG G
Sbjct: 159 QVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNN 218
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
++L P + G+ +++++ G H +AL G +Y WG G LG G++ ++ P
Sbjct: 219 GNQLTPCRVAALH--GVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSP 276
Query: 367 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
+ K + + C + +G VY +G
Sbjct: 277 LQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 243 (90.6 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 78/307 (25%), Positives = 144/307 (46%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A + + +VF G N S C G D+ I P+ +EAL G ++ G
Sbjct: 30 SANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIV-PKKLEALCGKKISSLSYGSGPHVL 88
Query: 231 L-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
L T G V+ G N + QLG+G T TP + + V+++A G + +A++ +G
Sbjct: 89 LCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGD 148
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
+Y++G + +G G ++ PR + + + VV ++ G +A+ ++G VY WG
Sbjct: 149 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKM-VVGIACGQTSSMAVVNNGEVYGWGY 207
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G LG G+ ++ P +++L +Q+ T L D G +Y +G +G LG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQIST--GLYHTVVVTDRGRLFGFGD--NERAQLGHD 465
++ S+++ +I+ + V +I+ + + T G+++ +G + L H
Sbjct: 268 GNK--SNQLSPLQIM--MEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPHL 323
Query: 466 TLRGCLE 472
T C +
Sbjct: 324 THFACTD 330
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 287 (106.1 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 67/206 (32%), Positives = 111/206 (53%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q++ + H+ + GQ+F G+N+ G R I P+ +++L G+P Q++AG
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
N + L++ G V GSN+ GQLG GDT DR P + L V I+ G + +
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGK-KTVSISCGGEHTATL 238
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGY 343
+ G V++FGSG LGH DE PR + G V +V+ G H + L + +
Sbjct: 239 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVLVALTNR 296
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPL 369
+Y++G G G LG+G+++ +++P P+
Sbjct: 297 IYSFGCGMQGQLGNGEQVKQSVPLPV 322
Score = 256 (95.2 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 65/196 (33%), Positives = 103/196 (52%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVS 329
V+QIA G + +A++ +G ++ +G ++ LG ++ +Q P+ +Q+ GI V ++S
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC--GIPVAQIS 177
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
AG H L SG V+ WG G LG GD D+ +P + SL V + T
Sbjct: 178 AGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTAT 237
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDR 448
L G+V+ FG GFG LG + D+ PR++ L VSQ++ G +HT+V V
Sbjct: 238 LSKGGTVFTFGSGGFGQLGH--NSLKDEH-HPRLVAELWGSKVSQVTCGRHHTLVLVALT 294
Query: 449 GRLFGFGDNERAQLGH 464
R++ FG + QLG+
Sbjct: 295 NRIYSFGCGMQGQLGN 310
Score = 226 (84.6 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 77/231 (33%), Positives = 107/231 (46%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QI G H++ +SN +F G + G LG E S + V Q+SA
Sbjct: 121 IQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGG 180
Query: 173 NHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH+ FVL SG VF G NS+ G DT F P +V++L G ++ G T L
Sbjct: 181 NHS-FVLSLSGVVFGWGSNSAGQLGLGDTTDR-FVPTIVKSLSGKKTVSISCGGEHTATL 238
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTG-NGV 289
+ G V T GS GQLGH D P+ +A L GS V Q+ G + L +
Sbjct: 239 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVLVALTNR 296
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVAL 338
+YSFG G LG+GEQ + P + T + ++ AG++H AL
Sbjct: 297 IYSFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347
Score = 219 (82.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 67/219 (30%), Positives = 101/219 (46%)
Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLE 266
R ++ L Q+ G + L+ G + G N HGQLG + +P+ + L
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
+ V QI+AG ++ ++ +GVV+ +GS S LG G+ D P +++ G V
Sbjct: 170 GI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSL--SGKKTV 226
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
+S G EH L G V+T+G G G LGH D+ P ++ L QV +
Sbjct: 227 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHH 286
Query: 387 TFVLVD-TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
T VLV T +Y FG G LG ++ V V P +L
Sbjct: 287 TLVLVALTNRIYSFGCGMQGQLGNGEQ-VKQSVPLPVLL 324
Score = 196 (74.1 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 49/145 (33%), Positives = 76/145 (52%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCAR 383
V++++ GD+H VAL + G ++ WG+ G LG ++ P+ L SL Q+ A
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
+FVL +G V+G+G G LG D +D+ + P I+ SL IS G HT
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGD--TTDRFV-PTIVKSLSGKKTVSISCGGEHTA 236
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLR 468
++ G +F FG QLGH++L+
Sbjct: 237 TLSKGGTVFTFGSGGFGQLGHNSLK 261
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 287 (106.1 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 85/300 (28%), Positives = 143/300 (47%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V +S + H+A V + +++ G N+ G + I +P V+ALK K G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLG-LGSKSAISKPTCVKALKPEKVKLAACGR 96
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N T T G+V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
+G ++ +G S +G + P+ + G V +S G H + + G +Y
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELY 212
Query: 346 TWGKGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
+G+ G LG +++ + P+ +S + + +QV T VL + +VY FG
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV-IQVACGGEHTVVLTEN-AVYTFGLGQ 270
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
FG LG + P++++++R +S IS G HT ++TD G ++ FGD +LG
Sbjct: 271 FGQLGLGT--FLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLG 328
Score = 254 (94.5 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 75/247 (30%), Positives = 129/247 (52%)
Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
GR HTL+ + +V++ G + G LG G +T + +F I+F ++ H + Q+SA N +A
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLG-DTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + G++F GDNS G ++ + + P+ V G P ++ G + F+T G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSN-VCVPQQVTI--GKPVSWISCGYYHSAFVTTDGE 210
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
++ G +G+LG + L + TP+ ++ + E V+Q+A G + + +T N V Y+FG
Sbjct: 211 LYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE--KVIQVACGGEHTVVLTENAV-YTFG 267
Query: 295 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G LG G + +P+ I+ R + I + S G+ H + G +YT+G G G
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYI--SCGENHTALITDIGLMYTFGDGRHG 325
Query: 354 ALGHGDE 360
LG G E
Sbjct: 326 KLGLGLE 332
Score = 161 (61.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 43/155 (27%), Positives = 70/155 (45%)
Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARK 384
V +S GDEH + + +Y +G G LG G + + P + +LK + + C R
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97
Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH-VSQISTGLYHTV 443
T V + G+VY G G LG D + ++ + H + Q+S G +
Sbjct: 98 H-TLVSTEGGNVYATGGNNEGQLGLGDTEERNTF---HVISFFTSEHKIKQLSAGSNTSA 153
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
+T+ GRLF +GDN Q+G + P ++ I
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI 188
Score = 141 (54.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 75/276 (27%), Positives = 121/276 (43%)
Query: 69 SIYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
++YA G + Q+ L + N V+ F S EH I + SAG+ T L
Sbjct: 107 NVYATGGNNEGQLGLGDTEERNTFHVISFFTS-EHK--IKQLSAGS---NTS---AALTE 157
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
+ +F G + G +G + CV I P V +S H+AFV G+++
Sbjct: 158 DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP----VSWISCGYYHSAFVTTDGELYV 213
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNT 244
G+ + G N+ + R + + +P K QV G T LT V+T G
Sbjct: 214 FGEPENGKLGL--PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLT-ENAVYTFGLGQ 270
Query: 245 HGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
GQLG G L + PK I + + ++ I+ G ++ +T G++Y+FG G + LG
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQ-TISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
Query: 304 GEQH--DELQPRAIQTFRRKGIHVVR-VSAGDEHVV 336
G ++ + P F R +V+ V+ G H+V
Sbjct: 330 GLENFTNHFIPTLCSNFLR---FIVKLVACGGCHMV 362
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 285 (105.4 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 69/240 (28%), Positives = 123/240 (51%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
+++Q++ + H+ + + G++F G N G P +VE L GVP Q++A
Sbjct: 149 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 208
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
G + L++ G+V++ G N GQLG G T ++ +P I L++ V +A G +
Sbjct: 209 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQ-KVEFLACGGCHTAL 267
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSG 342
+T +G+V++FG G LGH +EL+PR + G V +++ G +H +A + +G
Sbjct: 268 LTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL--VGNRVTQIACGRQHTLAYVSDTG 325
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
V+++G G G LG+G ++ +P P+ L S + K ++V G+ WM
Sbjct: 326 KVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSESSTSVKELIMVAGGNQSILIWM 385
Score = 273 (101.2 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 67/216 (31%), Positives = 110/216 (50%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRV 328
+++QI G + LA++ G ++++G + LG G P ++ G+ +V++
Sbjct: 149 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL--SGVPLVQI 206
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
SAG+ H +AL SG VY+WG+ CG LG G +K P + +L + T
Sbjct: 207 SAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTA 266
Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTD 447
+L +G V+ FG +G LG + LRPR++ L + V+QI+ G HT+ V+D
Sbjct: 267 LLTKSGLVFTFGDGKYGQLG---HNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSD 323
Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
G++F FG + QLG+ R L P + + EE
Sbjct: 324 TGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEE 359
Score = 249 (92.7 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 77/255 (30%), Positives = 119/255 (46%)
Query: 99 SVEHSS-DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR 156
S+EH+ + +QIT G YH+L +S +F+ G +L G LG G +
Sbjct: 135 SIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEI 194
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALK 214
+ S +VQ+SA E H+ + SG V++ G N CG + P +EAL
Sbjct: 195 VENLSGVPLVQISAGEAHSMALSMSGNVYSWGRND---CGQLGLGHTYNKESPSCIEALD 251
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQ 273
+ + G T LT G V T G +GQLGH T + P+ + L VG+ V Q
Sbjct: 252 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGL--VGNRVTQ 309
Query: 274 IAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
IA G + LA V+ G V+SFGSG LG+G ++L PR ++ + + ++
Sbjct: 310 IACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSESSTSVK 369
Query: 333 EHVVALDSSGYVYTW 347
E ++ + + W
Sbjct: 370 ELIMVAGGNQSILIW 384
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 283 (104.7 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 84/276 (30%), Positives = 126/276 (45%)
Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 261 SIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQT 317
+ L+ G + Q++ G + + VT G +Y+FGS C+G + + L+P +
Sbjct: 419 HVEKLQ--GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 476
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
F + +VS GD HVV L + VY+WG G G LG E D P+ + K+ +
Sbjct: 477 FLNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSL 427
V V TF+L +G V G F LG G+ + I L
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQL 594
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 202 (76.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 80/332 (24%), Positives = 133/332 (40%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
G+ L G LGHG + + + + QVS ++ V GQ++ G + C
Sbjct: 399 GTKLHGQLGHGDKASYRQP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457
Query: 195 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
G P + P + P +QV+ G N LT V++ G +G+LG
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517
Query: 254 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HG 304
D TP+ + P + VQ +++L +G + G N C+ H
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577
Query: 305 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
H+ + ++ + +R ++ G H A+D G + T+G CG LG G+ K
Sbjct: 578 AYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN-YKK 636
Query: 364 TLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-P-DRGVSDKVL 419
L L L ++V T D ++ +G G G L P +R +
Sbjct: 637 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDIC 696
Query: 420 R--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 448
PR I SL HHV +S +HT+++ ++
Sbjct: 697 TSWPRPIFGSL--HHVPDLSCRGWHTILIVEK 726
Score = 188 (71.2 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 95/368 (25%), Positives = 153/368 (41%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G +QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEV----GSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNK 499
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
VYS+G G LG + D P+ + K + +V V G + L SG V G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Query: 349 KG--------YC--GALGHG--DEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
C G + H EI T L+ S ++ A K T + + G
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGF 454
+ FG G LG G K L +L L V ++S G T+ TD +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674
Query: 455 GDNERAQL 462
G+ +L
Sbjct: 675 GNGGNGRL 682
Score = 186 (70.5 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 75/302 (24%), Positives = 126/302 (41%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLNNPVEQVS 486
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH + ++ +V++ G G D+ + P+ V+ K + V G + T
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQKVDVPKALIIVAVQCGCDGTF 545
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S +++ + IA G
Sbjct: 546 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPG 605
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 606 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 664
Query: 338 LDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
+++ WG G G L HG +I + P P+ H+ C R T ++
Sbjct: 665 ATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTILI 723
Query: 391 VD 392
V+
Sbjct: 724 VE 725
Score = 178 (67.7 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 61/279 (21%), Positives = 112/279 (40%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 415
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
+ + QVS ++ V GQ++ G + C G P + P +
Sbjct: 416 QP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
P +QV+ G N LT V++ G +G+LG D TP+ + P +
Sbjct: 475 NFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFRRK 321
VQ +++L +G + G N C+ H H+ + ++
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQL 594
Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
+ +R ++ G H A+D G + T+G CG LG G+
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN 633
Score = 171 (65.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 64/248 (25%), Positives = 101/248 (40%)
Query: 237 VHTCGSNTHGQLGHGDTL-DRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSF 293
VH C Q D L DRP K +EE +++ VT + V +
Sbjct: 285 VHACLDQDPEQRPTADELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTS 344
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----G 348
+ + G G+ P+ + + G +V AG+ H + +YTW G
Sbjct: 345 RTSEVYVWGGGKS----TPQKLDVIK-SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGG 399
Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G LGHGD+ P+ + L+ QV T + D G +Y FG +G +G
Sbjct: 400 TKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG 459
Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
D+ +VL P L+ + V Q+S G H VV+T ++ +G E +LG D+
Sbjct: 460 V-DKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEE 518
Query: 469 GCLEPTEI 476
P ++
Sbjct: 519 DYYTPQKV 526
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 282 (104.3 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 83/298 (27%), Positives = 137/298 (45%)
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
+S + H A V + +++ G N+ G + I +P ++ALK K G N
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLG-LGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
T T G V+ G N GQLG GDT DR T I ++ Q++AG + A+T +
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTED 158
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
G ++ +G S +G ++ + P + G + +S G H + G +YT+
Sbjct: 159 GKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYHSAFVTMDGELYTF 214
Query: 348 GKGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
G+ G LG +E+ + P+ + + + +QV T VL + VY FG FG
Sbjct: 215 GEPENGKLGLPNELLMNHRSPQRVLGIPERV-IQVACGGGHTVVLTEK-VVYAFGLGQFG 272
Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
LG + P+I++ ++ + IS G HT ++T+ G L+ FGD +LG
Sbjct: 273 QLGLGT--FLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLG 328
Score = 251 (93.4 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 82/271 (30%), Positives = 137/271 (50%)
Query: 119 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
GR HTL+ +++ V++ G + G LG G +T +F +I F + A + Q+SA N +A
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGLG-DTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + G++F GDNS G D + + P E G P ++ G + F+T+ G
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSN-VCIPH--EVTVGKPISWISCGYYHSAFVTMDGE 210
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
++T G +G+LG + L + +P+ + + E V+Q+A G + + +T VVY+FG
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE--RVIQVACGGGHTVVLTEK-VVYAFG 267
Query: 295 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G LG G + +P+ I+ R K + +S G+ H + G +YT+G G G
Sbjct: 268 LGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTELGLLYTFGDGRHG 325
Query: 354 ALGHGDE--IDKTLPEPLSSLKSHLAVQVCA 382
LG G E ++ P S+ AVQ+ A
Sbjct: 326 KLGLGMENFTNQFFPTLCSNFL-RFAVQLIA 355
Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 47/153 (30%), Positives = 71/153 (46%)
Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRK 386
+S GDEH + + +Y +G G LG G + P + +LK + + C R
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH- 98
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
T V DTG VY G G LG D D+ +I+ A + Q+S G + +T
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 156
Query: 447 DRGRLFGFGDNERAQLG-HDTLRGCLEPTEIFI 478
+ G+LF +GDN Q+G D C+ P E+ +
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSNVCI-PHEVTV 188
Score = 140 (54.3 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 55/229 (24%), Positives = 103/229 (44%)
Query: 115 QITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 172
Q++ G L + +F G + G +G ++ C+ + P + +S
Sbjct: 144 QLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKP----ISWISCGY 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGF 230
H+AFV G+++T G+ + G N + R + + G+P + QV G T
Sbjct: 200 YHSAFVTMDGELYTFGEPENGKLGL--PNELLMNHRSPQRVLGIPERVIQVACGGGHTVV 257
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
LT + V+ G GQLG G L + PK I +++ + I+ G ++ +T G+
Sbjct: 258 LTEKV-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQ-KICHISCGENHTALMTELGL 315
Query: 290 VYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
+Y+FG G + LG G ++ ++ P F R + ++ + G H++
Sbjct: 316 LYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLI--ACGGCHML 362
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 282 (104.3 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 82/276 (29%), Positives = 126/276 (45%)
Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 378 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 437
Query: 261 SIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQT 317
+ L+ G + Q++ G + + VT G +Y+FGS C+G + + L+P +
Sbjct: 438 HVEKLQ--GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 495
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
F + +VS GD HVV L + VY+WG G G LG E D P+ + K+ +
Sbjct: 496 FSNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 553
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSL 427
V V TF+L +G V G F LG G+ + + L
Sbjct: 554 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 613
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + ++ G HT + +RGRL FG N+ QLG
Sbjct: 614 SFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLG 649
Score = 206 (77.6 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 81/332 (24%), Positives = 133/332 (40%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
G+ L G LGHG + + + + QVS ++ V GQ++ G + C
Sbjct: 418 GTKLHGQLGHGDKASYRQP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 476
Query: 195 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
G P + P + P +QV+ G N LT V++ G +G+LG
Sbjct: 477 MGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 536
Query: 254 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HG 304
D TP+ + P + VQ +++L +G + G N C+ H
Sbjct: 537 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 596
Query: 305 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
H+ + ++ + +R V+ G H A+D G + T+G CG LG G+ K
Sbjct: 597 AYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN-YKK 655
Query: 364 TLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-P-DRGVSDKVL 419
L L L ++V T D ++ +G G G L P +R +
Sbjct: 656 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDIC 715
Query: 420 R--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 448
PR I SL HHV +S +HT+++ ++
Sbjct: 716 TSWPRPIFGSL--HHVPDLSCRGWHTILIVEK 745
Score = 191 (72.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 75/302 (24%), Positives = 127/302 (42%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF S V QVS
Sbjct: 449 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFSNNPVEQVS 505
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH + ++ +V++ G G D+ + P+ V+ K + V G + T
Sbjct: 506 CGDNHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQKVDVPKALIIVAVQCGCDGTF 564
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S +++ + +A G
Sbjct: 565 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPG 624
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 625 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 683
Query: 338 LDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
+++ WG G G L HG +I + P P+ H+ C R T ++
Sbjct: 684 ATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTILI 742
Query: 391 VD 392
V+
Sbjct: 743 VE 744
Score = 190 (71.9 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 94/368 (25%), Positives = 153/368 (41%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 349 RSSTVTETPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 404
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G +QV+ G +FT +T
Sbjct: 405 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 462
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ P+ + P++ V Q++ G ++++ +T N
Sbjct: 463 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNK 518
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
VYS+G G LG + D P+ + K + +V V G + L SG V G
Sbjct: 519 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 576
Query: 349 KG--------YC--GALGHG--DEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
C G + H E+ T L+ S ++ A K T + + G
Sbjct: 577 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGR 636
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGF 454
+ FG G LG G K L +L L V ++S G T+ TD +F +
Sbjct: 637 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 693
Query: 455 GDNERAQL 462
G+ +L
Sbjct: 694 GNGGNGRL 701
Score = 182 (69.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 62/279 (22%), Positives = 112/279 (40%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 375 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 434
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
+ + QVS ++ V GQ++ G + C G P + P +
Sbjct: 435 QP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 493
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
P +QV+ G N LT V++ G +G+LG D TP+ + P +
Sbjct: 494 NFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 553
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFRRK 321
VQ +++L +G + G N C+ H H+ + ++
Sbjct: 554 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 613
Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
+ +R V+ G H A+D G + T+G CG LG G+
Sbjct: 614 SFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN 652
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 64/248 (25%), Positives = 101/248 (40%)
Query: 237 VHTCGSNTHGQLGHGDTL-DRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSF 293
VH C Q D L DRP K +EE +++ VT + V +
Sbjct: 304 VHACLDQDPEQRPTADELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTETPIAVVTS 363
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----G 348
+ + G G+ P+ + + G +V AG+ H + +YTW G
Sbjct: 364 RTSEVYVWGGGKS----TPQKLDVIK-SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGG 418
Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G LGHGD+ P+ + L+ QV T + D G +Y FG +G +G
Sbjct: 419 TKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG 478
Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
D+ +VL P L+ + V Q+S G H VV+T ++ +G E +LG D+
Sbjct: 479 V-DKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEE 537
Query: 469 GCLEPTEI 476
P ++
Sbjct: 538 DYYTPQKV 545
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 281 (104.0 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 83/276 (30%), Positives = 126/276 (45%)
Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 357 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 416
Query: 261 SIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQT 317
+ L+ G + Q++ G + + VT G +Y+FGS C+G + + L+P +
Sbjct: 417 HVEKLQ--GKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF 474
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
F + +VS GD HVV L + VY+WG G G LG E D P+ + K+ +
Sbjct: 475 FLSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALII 532
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSL 427
V V TF+L +G V G F LG G+ + + L
Sbjct: 533 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 592
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 593 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 628
Score = 207 (77.9 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 83/334 (24%), Positives = 137/334 (41%)
Query: 135 GSSLCGVLGHGPETT--QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSS 192
G+ L G LGHG + + Q ++ A H QVS ++ V GQ++ G +
Sbjct: 397 GTKLHGQLGHGDKASYRQPKHVEKLQ-GKAIH--QVSCGDDFTVCVTDEGQLYAFGSDYY 453
Query: 193 FCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
C G + P + P + P +QV+ G N LT V++ G +G+LG
Sbjct: 454 GCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLD 513
Query: 252 DTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG---- 302
D TP+ + P + VQ +++L +G + G N C+
Sbjct: 514 SEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIIN 573
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
H H+ + ++ + +R ++ G H A+D G + T+G CG LG G+
Sbjct: 574 HEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN-Y 632
Query: 362 DKTLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-P-DRGVSDK 417
K L L L ++V T D ++ +G G G L P +R
Sbjct: 633 KKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSD 692
Query: 418 VLR--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 448
+ PR I SL HHV +S +HT+++ ++
Sbjct: 693 ICTSWPRPIFGSL--HHVPDLSCRGWHTILIVEK 724
Score = 190 (71.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 75/302 (24%), Positives = 127/302 (42%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 428 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM---QLNFFLSNPVEQVS 484
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH + ++ +V++ G G D+ + P+ V+ K + V G + T
Sbjct: 485 CGDNHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQRVDVPKALIIVAVQCGCDGTF 543
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S +++ + IA G
Sbjct: 544 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPG 603
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 604 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 662
Query: 338 LDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
+++ WG G G L HG +I + P P+ H+ C R T ++
Sbjct: 663 ATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTILI 721
Query: 391 VD 392
V+
Sbjct: 722 VE 723
Score = 186 (70.5 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 94/368 (25%), Positives = 153/368 (41%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 328 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 383
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G QV+ G +FT +T
Sbjct: 384 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 441
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEE----VGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ + P+ + P++ V Q++ G ++++ +T N
Sbjct: 442 EGQLYAFGSDYYGCMG----VDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 497
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
VYS+G G LG + D P+ + K + +V V G + L SG V G
Sbjct: 498 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 555
Query: 349 KG--------YC--GALGHG--DEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
C G + H E+ T L+ S ++ A K T + + G
Sbjct: 556 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 615
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGF 454
+ FG G LG G K L +L L V ++S G T+ TD +F +
Sbjct: 616 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 672
Query: 455 GDNERAQL 462
G+ +L
Sbjct: 673 GNGGNGRL 680
Score = 183 (69.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 64/281 (22%), Positives = 116/281 (41%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETT-- 149
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 354 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 413
Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPR 208
Q ++ A H QVS ++ V GQ++ G + C G + P + P
Sbjct: 414 QPKHVEKLQ-GKAIH--QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM 470
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEE 267
+ P +QV+ G N LT V++ G +G+LG D TP+ + P
Sbjct: 471 QLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKAL 530
Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFR 319
+ VQ +++L +G + G N C+ H H+ + +
Sbjct: 531 IIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK 590
Query: 320 RKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
+ + +R ++ G H A+D G + T+G CG LG G+
Sbjct: 591 QLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN 631
Score = 168 (64.2 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 66/275 (24%), Positives = 112/275 (40%)
Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPT-PKSIAPLEE 267
V+ ++G+ +V + G + + VH C + D L D P K +EE
Sbjct: 259 VKIVQGIRAMEVDSSQYSLGLIQL---VHACLDQDPERRPTADALLDLPLLRKRRREMEE 315
Query: 268 VGSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
+++ VT + V + + + G G+ P+ + + G
Sbjct: 316 KVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKS----TPQKLDVIK-SGCSAR 370
Query: 327 RVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
+V AG+ H + +YTW G G LGHGD+ P+ + L+ QV
Sbjct: 371 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVS 430
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
T + D G +Y FG +G +G D+ +VL P L+ ++ V Q+S G H
Sbjct: 431 CGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQVSCGDNH 489
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
VV+T ++ +G E +LG D+ P +
Sbjct: 490 VVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRV 524
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 281 (104.0 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 83/276 (30%), Positives = 126/276 (45%)
Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 261 SIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQT 317
+ L+ G + Q++ G + + VT G +Y+FGS C+G + + L+P +
Sbjct: 419 HVEKLQ--GKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF 476
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
F + +VS GD HVV L + VY+WG G G LG E D P+ + K+ +
Sbjct: 477 FLSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALII 534
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSL 427
V V TF+L +G V G F LG G+ + + L
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 207 (77.9 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 83/334 (24%), Positives = 137/334 (41%)
Query: 135 GSSLCGVLGHGPETT--QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSS 192
G+ L G LGHG + + Q ++ A H QVS ++ V GQ++ G +
Sbjct: 399 GTKLHGQLGHGDKASYRQPKHVEKLQ-GKAIH--QVSCGDDFTVCVTDEGQLYAFGSDYY 455
Query: 193 FCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
C G + P + P + P +QV+ G N LT V++ G +G+LG
Sbjct: 456 GCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLD 515
Query: 252 DTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG---- 302
D TP+ + P + VQ +++L +G + G N C+
Sbjct: 516 SEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIIN 575
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
H H+ + ++ + +R ++ G H A+D G + T+G CG LG G+
Sbjct: 576 HEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN-Y 634
Query: 362 DKTLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-P-DRGVSDK 417
K L L L ++V T D ++ +G G G L P +R
Sbjct: 635 KKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSD 694
Query: 418 VLR--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 448
+ PR I SL HHV +S +HT+++ ++
Sbjct: 695 ICTSWPRPIFGSL--HHVPDLSCRGWHTILIVEK 726
Score = 190 (71.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 75/302 (24%), Positives = 127/302 (42%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH + ++ +V++ G G D+ + P+ V+ K + V G + T
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQRVDVPKALIIVAVQCGCDGTF 545
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S +++ + IA G
Sbjct: 546 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPG 605
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 606 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 664
Query: 338 LDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
+++ WG G G L HG +I + P P+ H+ C R T ++
Sbjct: 665 ATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTILI 723
Query: 391 VD 392
V+
Sbjct: 724 VE 725
Score = 186 (70.5 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 94/368 (25%), Positives = 153/368 (41%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEE----VGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ + P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
VYS+G G LG + D P+ + K + +V V G + L SG V G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Query: 349 KG--------YC--GALGHG--DEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
C G + H E+ T L+ S ++ A K T + + G
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGF 454
+ FG G LG G K L +L L V ++S G T+ TD +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674
Query: 455 GDNERAQL 462
G+ +L
Sbjct: 675 GNGGNGRL 682
Score = 183 (69.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 64/281 (22%), Positives = 116/281 (41%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETT-- 149
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 415
Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPR 208
Q ++ A H QVS ++ V GQ++ G + C G + P + P
Sbjct: 416 QPKHVEKLQ-GKAIH--QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM 472
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEE 267
+ P +QV+ G N LT V++ G +G+LG D TP+ + P
Sbjct: 473 QLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKAL 532
Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFR 319
+ VQ +++L +G + G N C+ H H+ + +
Sbjct: 533 IIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK 592
Query: 320 RKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
+ + +R ++ G H A+D G + T+G CG LG G+
Sbjct: 593 QLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN 633
Score = 167 (63.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 46/162 (28%), Positives = 72/162 (44%)
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
+ G +V AG+ H + +YTW G G LGHGD+ P+ + L+
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
QV T + D G +Y FG +G +G D+ +VL P L+ ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQ 484
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
+S G H VV+T ++ +G E +LG D+ P +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRV 526
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 279 (103.3 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 83/276 (30%), Positives = 126/276 (45%)
Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 376 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 435
Query: 261 SIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQT 317
+ L+ G + Q++ G + + VT G +Y+FGS C+G + + L+P +
Sbjct: 436 HVEKLQ--GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDF 493
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
F + +VS GD HVV L + VY+WG G G LG E D P+ + K+ +
Sbjct: 494 FLSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 551
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSL 427
V V TF+L +G V G F LG G+ + + L
Sbjct: 552 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 611
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 612 SFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLG 647
Score = 199 (75.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 79/332 (23%), Positives = 134/332 (40%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
G+ L G LGHG + + + + QVS ++ V GQ++ G + C
Sbjct: 416 GTKLHGQLGHGDKASYRQP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 474
Query: 195 CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
G + + P ++ P +QV+ G N LT V++ G +G+LG
Sbjct: 475 MGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 534
Query: 254 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HG 304
D TP+ + P + VQ +++L +G + G N C+ H
Sbjct: 535 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 594
Query: 305 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
H+ + ++ + +R ++ G H ALD G + T+G CG LG G+ K
Sbjct: 595 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGN-YKK 653
Query: 364 TLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-P-DRGVSDKVL 419
L L L ++V T D ++ +G G G L P +R +
Sbjct: 654 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDIC 713
Query: 420 R--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 448
PR I SL HHV +S ++T+++ ++
Sbjct: 714 TSWPRPIFGSL--HHVPDLSCRGWNTILIVEK 743
Score = 182 (69.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 61/279 (21%), Positives = 113/279 (40%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 373 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 432
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLV 210
+ + QVS ++ V GQ++ G + C G + + P +
Sbjct: 433 QP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQL 491
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
+ P +QV+ G N LT V++ G +G+LG D TP+ + P +
Sbjct: 492 DFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 551
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFRRK 321
VQ +++L +G + G N C+ H H+ + ++
Sbjct: 552 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 611
Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
+ +R ++ G H ALD G + T+G CG LG G+
Sbjct: 612 SFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGN 650
Score = 182 (69.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 94/368 (25%), Positives = 151/368 (41%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 347 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 402
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G +QV+ G +FT +T
Sbjct: 403 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 460
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEE----VGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ + P++ V Q++ G ++++ +T N
Sbjct: 461 EGQLYAFGSDYYGCMG----VDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNK 516
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
VYS+G G LG + D P+ + K + +V V G + L SG V G
Sbjct: 517 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 574
Query: 349 KG--------YC--GALGHG--DEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
C G + H E+ T L+ S ++ A K T L + G
Sbjct: 575 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGR 634
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGF 454
+ FG G LG G K L +L L V ++S G T+ TD +F +
Sbjct: 635 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 691
Query: 455 GDNERAQL 462
G+ +L
Sbjct: 692 GNGGNGRL 699
Score = 177 (67.4 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 71/299 (23%), Positives = 124/299 (41%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 172
Q++ G T+ +++ +++ GS G +G + + +++F + V QVS +
Sbjct: 447 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGD 506
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
NH + ++ +V++ G G D+ + P+ V+ K + V G + T LT
Sbjct: 507 NHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLT 565
Query: 233 IRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSY 280
G V CG N +LG H + P S +++ + IA G ++
Sbjct: 566 QSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTH 625
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 626 TAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIAATD 684
Query: 341 SGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
+++ WG G G L HG +I + P P+ H+ C R T ++V+
Sbjct: 685 DNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWNTILIVE 742
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 64/249 (25%), Positives = 102/249 (40%)
Query: 237 VHTCGSNTHGQLGHGDTL-DRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYS 292
VH C Q D L DRP + +EE +++ VT + V +
Sbjct: 301 VHACLDQDPEQRPTADELLDRPLLRKRRSREMEEKVTLLNAPTKRPRSSTVTEAPIAVVT 360
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW----- 347
+ + G G+ P+ + + G +V AG+ H + +YTW
Sbjct: 361 SRTSEVYVWGGGKS----TPQKLDVIK-SGCSARQVCAGNTHFAVVTVEKELYTWVNMQG 415
Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
G G LGHGD+ P+ + L+ QV T + D G +Y FG +G +
Sbjct: 416 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCM 475
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G D+ +VL P LD ++ V Q+S G H VV+T ++ +G E +LG D+
Sbjct: 476 GV-DKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 534
Query: 468 RGCLEPTEI 476
P ++
Sbjct: 535 EDYYTPQKV 543
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 194 (73.4 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 58/192 (30%), Positives = 94/192 (48%)
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
GSN + LG G ++ + + ++QI+ G +++LA++ VYS+GS +
Sbjct: 344 GSNDNNFLG-G-VINNELQMMTDQMNSI-KIIQISCGSNHILALSDQYHVYSWGSAEHGK 400
Query: 301 LGHGEQHDELQ--------PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
LGHGE + + P+ I++ + KG+ V+ VS+G H +AL + TWGKG
Sbjct: 401 LGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSD 460
Query: 353 GALGHGDEIDKTLPEPLSSL--KSHLAVQVCARKRKTF-VLVDTGSVYGFGWMGFGSLGF 409
G LG G D P + + K+ VQ+C +F + ++ +Y FGW
Sbjct: 461 GQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITLEKRELYQFGW------SI 514
Query: 410 PDRGVSDKVLRP 421
P G SD +L P
Sbjct: 515 P-LGKSDDILIP 525
Score = 157 (60.3 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 46/164 (28%), Positives = 85/164 (51%)
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----RP----TPK 260
+ + + + Q++ G N L+ + HV++ GS HG+LGHG+ P +PK
Sbjct: 362 MTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPK 421
Query: 261 SIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
I L+E G +V+ +++G S+ +A+T + + ++G GS+ LG G +HD P I+
Sbjct: 422 KIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVI 481
Query: 320 RKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
K +V++ G + + L+ +Y +G + LG D+I
Sbjct: 482 DKNEKIVQICCGYFNSFFITLEKRE-LYQFG--WSIPLGKSDDI 522
Score = 139 (54.0 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 34/100 (34%), Positives = 54/100 (54%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGD-NSSFCCGHRDTNRPIFRPR------LVEALKGV 216
++VQ+S H + SG +++ G NSS GH D+ +P+ L++AL G
Sbjct: 39 NIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGD 98
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
QV+ GL+FT LT +G ++ GSN GQL G +++
Sbjct: 99 SVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNK 138
Score = 134 (52.2 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 36/116 (31%), Positives = 62/116 (53%)
Query: 262 IAPLE--EVG--SVVQIAAGPSYMLAVTGNGVVYSFGSG-SNFCLGHGEQHDEL-QPRAI 315
I P+E E+ ++VQ++ G ++ L ++ +G +YS+GS S+ LGHG+ ++ +P+ I
Sbjct: 27 IEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNI 86
Query: 316 QTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
+ F G V++VS G + L G +Y WG G L G ++K E
Sbjct: 87 KKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNKNEKE 142
Score = 132 (51.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLS--SLKSHLAVQVCARKRKTFVLVDTGSVY 397
+S ++ WG+G + GD K + EP+ L VQ+ T VL D+G +Y
Sbjct: 8 NSKQIFYWGRG----VNQGD---KHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLY 60
Query: 398 GFGWMGF-GSLGFPDR----GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
+G G LG D G + + ++ +L V Q+STGL T V+TD+G ++
Sbjct: 61 SWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIY 120
Query: 453 GFGDNERAQL 462
+G N QL
Sbjct: 121 NWGSNIEGQL 130
Score = 95 (38.5 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 37/141 (26%), Positives = 62/141 (43%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-----TNRP--IFRPRLVEAL--KG 215
++Q+S NH + V++ G GH + + P I P+ +++L KG
Sbjct: 371 IIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKG 430
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP-LEEVGSVVQI 274
V V++G + LT+ + T G + GQLG G D +P I +++ +VQI
Sbjct: 431 VTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQI 490
Query: 275 AAGPSYMLAVT-GNGVVYSFG 294
G +T +Y FG
Sbjct: 491 CCGYFNSFFITLEKRELYQFG 511
Score = 91 (37.1 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 105 DIVETSAGNM-QITTGRYHTLLISNSS-VFSCGSS-LCGVLGHGPETTQ------CVSFT 155
++ E + N+ Q++ G HTL++S+S ++S GSS G LGHG Q F+
Sbjct: 31 EVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFS 90
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
I S V+QVS + + G ++ G N
Sbjct: 91 LIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSN 125
Score = 84 (34.6 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 34/133 (25%), Positives = 54/133 (40%)
Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP-DRGVSDK 417
D+ D E ++ S+ Q+ + T +L + G G FG LG P D DK
Sbjct: 548 DDDDDNDDEDENNDNSNRIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDK 607
Query: 418 ---VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN-----ERAQLGHDTLRG 469
V P ++ +L + V + G +H+V + L N E+ + T
Sbjct: 608 DSFVNYPTVIPALLPYFVESVQCGRWHSVAIVSNRNLRDHLTNSKKLKEKQKQKQQTNLE 667
Query: 470 CLEPTEIFIQEME 482
LE E I+E+E
Sbjct: 668 ILEEFESNIEEIE 680
Score = 69 (29.3 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
GV + L+ + D + + + QIS G H + ++D+ ++ +G E +LGH
Sbjct: 353 GVINNELQ-MMTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGH 403
Score = 51 (23.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
+ ++S+G H + L+ +G + G+G G LG
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLG 597
Score = 49 (22.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
+ QI++G S+ L + NG S G G LG H +
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSI 605
Score = 47 (21.6 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 13/56 (23%), Positives = 31/56 (55%)
Query: 106 IVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
+++ +G+ +Q++TG T ++++ S+++ GS++ G L G + IN
Sbjct: 91 LIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNKNEKENNIN 146
Score = 37 (18.1 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKS 374
G G G + G I +P+PL S
Sbjct: 162 GGGGGGGVKGGKNILSPIPQPLDQFSS 188
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 278 (102.9 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 68/207 (32%), Positives = 110/207 (53%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q++ + H+ + GQ+F G+N+ G R P+ +++L +P Q++AG
Sbjct: 117 VIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAG 176
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 283
N + L++ G V GSN+ GQLG GDT DR P + L G V I+ G +
Sbjct: 177 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSL--CGKKTVSISCGGEHTAT 234
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-SSG 342
++ G V++FGSG LGH DE PR I G V +V+ G H + + SS
Sbjct: 235 LSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELW--GSKVSQVTCGRHHTLVFEESSK 292
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPL 369
+Y++G G G LG+G+++ +++P P+
Sbjct: 293 LIYSFGCGMQGQLGNGEQVKQSVPLPV 319
Score = 249 (92.7 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 66/205 (32%), Positives = 105/205 (51%)
Query: 264 PLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRR 320
PL+ + + V+QIA G + +A++ +G ++ +G ++ LG EQ P+ +Q+
Sbjct: 108 PLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCE 167
Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
I V ++SAG H L SG V+ WG G LG GD D+ +P + SL V +
Sbjct: 168 --IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSI 225
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
T L G+V+ FG GFG LG + D+ PR++ L VSQ++ G +
Sbjct: 226 SCGGEHTATLSKGGTVFTFGSGGFGQLGH--NSLKDEH-HPRLIAELWGSKVSQVTCGRH 282
Query: 441 HTVVVTDRGRL-FGFGDNERAQLGH 464
HT+V + +L + FG + QLG+
Sbjct: 283 HTLVFEESSKLIYSFGCGMQGQLGN 307
Score = 218 (81.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 72/203 (35%), Positives = 97/203 (47%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QI G H++ +SN +F G + G LG E S + V Q+SA
Sbjct: 118 IQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGG 177
Query: 173 NHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
NH+ FVL SG VF G NS+ G DT + F P +V++L G ++ G T L
Sbjct: 178 NHS-FVLSLSGVVFGWGSNSAGQLGLGDT-KDRFVPTIVKSLCGKKTVSISCGGEHTATL 235
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNG-V 289
+ G V T GS GQLGH D P+ IA L GS V Q+ G + L + +
Sbjct: 236 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELW--GSKVSQVTCGRHHTLVFEESSKL 293
Query: 290 VYSFGSGSNFCLGHGEQHDELQP 312
+YSFG G LG+GEQ + P
Sbjct: 294 IYSFGCGMQGQLGNGEQVKQSVP 316
Score = 195 (73.7 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 48/145 (33%), Positives = 75/145 (51%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCAR 383
V++++ GD+H +AL + G ++ WG+ G LG ++ P+ L SL Q+ A
Sbjct: 117 VIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAG 176
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
+FVL +G V+G+G G LG D D+ + P I+ SL IS G HT
Sbjct: 177 GNHSFVLSLSGVVFGWGSNSAGQLGLGD--TKDRFV-PTIVKSLCGKKTVSISCGGEHTA 233
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLR 468
++ G +F FG QLGH++L+
Sbjct: 234 TLSKGGTVFTFGSGGFGQLGHNSLK 258
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 281 (104.0 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 83/276 (30%), Positives = 126/276 (45%)
Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 261 SIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQT 317
+ L+ G + Q++ G + + VT G +Y+FGS C+G + + L+P +
Sbjct: 419 HVEKLQ--GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 476
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
F + +VS GD HVV L + VY+WG G G LG E D P+ + K+ +
Sbjct: 477 FLSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSL 427
V V TF+L +G V G F LG G+ + + L
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 203 (76.5 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 80/332 (24%), Positives = 133/332 (40%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
G+ L G LGHG + + + + QVS ++ V GQ++ G + C
Sbjct: 399 GTKLHGQLGHGDKASYRQP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457
Query: 195 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
G P + P + P +QV+ G N LT V++ G +G+LG
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517
Query: 254 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HG 304
D TP+ + P + VQ +++L +G + G N C+ H
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577
Query: 305 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
H+ + ++ + +R ++ G H A+D G + T+G CG LG G+ K
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN-YKK 636
Query: 364 TLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-P-DRGVSDKVL 419
L L L ++V T D ++ +G G G L P +R +
Sbjct: 637 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDIC 696
Query: 420 R--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 448
PR I SL HHV +S +HT+++ ++
Sbjct: 697 TSWPRPIFGSL--HHVPDLSCRGWHTILIVEK 726
Score = 189 (71.6 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 75/302 (24%), Positives = 127/302 (42%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH + ++ +V++ G G D+ + P+ V+ K + V G + T
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGEYGRLG-LDSEEDYYTPQKVDVPKALIIVAVQCGCDGTF 545
Query: 230 FLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIAAG 277
LT G V CG N +LG H + P S +++ + IA G
Sbjct: 546 LLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPG 605
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ A+ G + +FG LG G L + G V+RVS GDE +A
Sbjct: 606 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 664
Query: 338 LDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
+++ WG G G L HG +I + P P+ H+ C R T ++
Sbjct: 665 ATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTILI 723
Query: 391 VD 392
V+
Sbjct: 724 VE 725
Score = 188 (71.2 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 94/368 (25%), Positives = 153/368 (41%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G +QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEE----VGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
VYS+G G LG + D P+ + K + +V V G + L SG V G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Query: 349 KG--------YC--GALGHG--DEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
C G + H E+ T L+ S ++ A K T + + G
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGF 454
+ FG G LG G K L +L L V ++S G T+ TD +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674
Query: 455 GDNERAQL 462
G+ +L
Sbjct: 675 GNGGNGRL 682
Score = 179 (68.1 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 61/279 (21%), Positives = 112/279 (40%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR 415
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
+ + QVS ++ V GQ++ G + C G P + P +
Sbjct: 416 QP-KHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
P +QV+ G N LT V++ G +G+LG D TP+ + P +
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLG----HGEQHDELQPRAIQTFRRK 321
VQ +++L +G + G N C+ H H+ + ++
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594
Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
+ +R ++ G H A+D G + T+G CG LG G+
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN 633
Score = 175 (66.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 64/248 (25%), Positives = 103/248 (41%)
Query: 237 VHTCGSNTHGQLGHGDTL-DRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSF 293
VH+C Q D L DRP K +EE +++ VT + V +
Sbjct: 285 VHSCLDQDPEQRPTADELLDRPLLRKRRREMEEKVTLLNAPTKRPRSSTVTEAPIAVVTS 344
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----G 348
+ + G G+ P+ + + G +V AG+ H + +YTW G
Sbjct: 345 RTSEVYVWGGGKS----TPQKLDVIK-SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGG 399
Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G LGHGD+ P+ + L+ QV T + D G +Y FG +G +G
Sbjct: 400 TKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG 459
Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
D+ +VL P L+ ++ V Q+S G H VV+T ++ +G E +LG D+
Sbjct: 460 V-DKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEE 518
Query: 469 GCLEPTEI 476
P ++
Sbjct: 519 DYYTPQKV 526
Score = 38 (18.4 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 150
G Y S +S F S CG GP +Q
Sbjct: 5 GEYERHCDSINSDFGSESGGCGDSSPGPSASQ 36
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 273 (101.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 94/378 (24%), Positives = 160/378 (42%)
Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVLQSG 182
+ + +S++ G L L C T + F +Q +N+ + +G
Sbjct: 158 MTMEQTSIYQWGQILTSSL----TLKSCAKATNMLFNDEISAPIQTEFGQNYNLILTDTG 213
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
V++ G S GH+ R + P + L K + G + + + G V++ G+
Sbjct: 214 AVYSSGLCSYGKTGHKK-KRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGN 272
Query: 243 NTHGQLGHGDTLDR-PTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
G+LG G+ PTP I+ + GS IAAG + + NG VYSFGS +
Sbjct: 273 GASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLH 332
Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
+ LG+ E L ++ + + ++ H V LD G VYT G G LG
Sbjct: 333 YKLGYKECDGALGFQSTPKKIPSILQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRA 392
Query: 359 -DEIDKTLPEPLSSLKS---------HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
PE +S S + Q+ T VL ++GS+Y +G LG
Sbjct: 393 ISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLG 452
Query: 409 FPDR-GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DT 466
+ G+S+ +P+++ +L + + + G H V ++D+G +F +GDN Q G +
Sbjct: 453 LINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCYGDNSTLQCGFGEV 512
Query: 467 LRGCLEPTEIFIQEMEED 484
L + T++ I+ D
Sbjct: 513 LNFEINLTKVKIETTSSD 530
Score = 159 (61.0 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 74/314 (23%), Positives = 133/314 (42%)
Query: 108 ETSAGNMQITTGR-YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
E SA +Q G+ Y+ +L +V+S G G GH + + T+I S +
Sbjct: 192 EISAP-IQTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIP-TQILELSNKRIK 249
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT---- 222
++ +H+ + GQV++ G+ +S G + + P L+ + ++
Sbjct: 250 SIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIA 309
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD---TLD-RPTPKSIAPLEEVGSVVQIAAGP 278
AG + + L G V++ GSN H +LG+ + L + TPK I + ++ S+ A+
Sbjct: 310 AGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSIA-CASWH 368
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRK--GI----HVVR-VSA 330
S L + G VY+ GS +N LG + P + K G V++ ++
Sbjct: 369 SVFLDLKGR--VYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIAC 426
Query: 331 GDEHVVALDSSGYVYTWG---KGYCGALGH-GDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
G L SG +Y+WG K G + G + P+ +++L + +
Sbjct: 427 GTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQH 486
Query: 387 TFVLVDTGSVYGFG 400
L D G V+ +G
Sbjct: 487 VVALSDQGEVFCYG 500
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 248 (92.4 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 84/291 (28%), Positives = 128/291 (43%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+++F+ G++ G LG G + + F V +++ H+A V G +F CG
Sbjct: 15 TALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCG 74
Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
N G T ++ L ++L G P +QV G +FT LT G V +CGSN+ GQL
Sbjct: 75 LNKDGQLGLGHTEDVLYFT-LCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQL 133
Query: 249 G--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCL 301
G HG P++I E VV IAAG + LA T +G+V+ +G SG C
Sbjct: 134 GVPHGPRRC-VVPQAIEVQRE--KVVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCP 190
Query: 302 GHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
G +P + T + V V AG H +L +G +Y WG G L
Sbjct: 191 GQTLPLFLTAKEPSKV-TVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLA-SQ 248
Query: 360 EIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
LP+ + + ++ V + +TG V+ +G +G LG
Sbjct: 249 AAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 218 (81.8 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 91/299 (30%), Positives = 134/299 (44%)
Query: 184 VFTCGDNS--SFCCGHRDTNRPIFRPR-LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
+F G NS GH++ + P+ L E K K++T G + +T +G + C
Sbjct: 17 LFAWGANSYGQLGLGHKED---VLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVC 73
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNF 299
G N GQLG G T D L +G +Q +A G + + +T NG V S GS S
Sbjct: 74 GLNKDGQLGLGHTEDVLYFTLCKSL--LGCPIQQVACGWDFTIILTKNGQVLSCGSNSFG 131
Query: 300 CLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA--- 354
LG HG + + P+AI+ R K VV ++AG H +A +SG V+ WG G +
Sbjct: 132 QLGVPHGPRRCVV-PQAIEVQREK---VVSIAAGLRHALAATASGLVFQWGTGLASSGRR 187
Query: 355 LGHGDEIDK--TLPEPLS---SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
L G + T EP L++ AV V A + L D G +Y +G G L
Sbjct: 188 LCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLA- 246
Query: 410 PDRGVSDKVLRPRILDSLRAHH-----VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
S P + + AH V+ + +G H V T+ G++F +G + QLG
Sbjct: 247 -----SQAAFLP-LPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 181 (68.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 69/250 (27%), Positives = 108/250 (43%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
+IT G H+ ++++ S+F CG + G LG G T + FT + QV+ +
Sbjct: 53 RITGGGGHSAIVTDQGSLFVCGLNKDGQLGLG-HTEDVLYFTLCKSLLGCPIQQVACGWD 111
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+ ++GQV +CG NS G R P+ +E + + AGL T
Sbjct: 112 FTIILTKNGQVLSCGSNSFGQLGVPHGPRRCVVPQAIEVQRE-KVVSIAAGLRHALAATA 170
Query: 234 RGHVHTCGSN--THGQ-LGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G V G+ + G+ L G TL P + E V + AG + ++T
Sbjct: 171 SGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTD 230
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
G +Y +GS + L L P+ I+ R + V V +G H+VA +G V+T
Sbjct: 231 AGELYVWGSNKHGQLASQAAFLPL-PQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFT 289
Query: 347 WGKGYCGALG 356
WG+ G LG
Sbjct: 290 WGRADYGQLG 299
Score = 143 (55.4 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 52/178 (29%), Positives = 75/178 (42%)
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
PS A ++++G+ S LG G + D L P+ + F + G V R++ G H
Sbjct: 5 PSASEAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGC-VKRITGGGGHSAI 63
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ G ++ G G LG G D SL QV T +L G V
Sbjct: 64 VTDQGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVL 123
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
G FG LG P G V+ P+ ++ R VS I+ GL H + T G +F +G
Sbjct: 124 SCGSNSFGQLGVP-HGPRRCVV-PQAIEVQREKVVS-IAAGLRHALAATASGLVFQWG 178
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/139 (28%), Positives = 64/139 (46%)
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSL-KSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
++ WG G LG G + D LP+ LS K ++ + ++ D GS++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLN 76
Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
G LG G ++ VL + SL + Q++ G T+++T G++ G N QL
Sbjct: 77 KDGQLGL---GHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQL 133
Query: 463 G--HDTLRGCLEPTEIFIQ 479
G H R C+ P I +Q
Sbjct: 134 GVPHGPRR-CVVPQAIEVQ 151
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 263 (97.6 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 89/296 (30%), Positives = 134/296 (45%)
Query: 126 ISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
+S ++V F+ G++ G LG G + + +F A + V+ H+A V G +
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDL 70
Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
F CG N G T + R + + L+G P +QV G +FT LT +G V +CGSN
Sbjct: 71 FVCGLNKDGQLGLGHTEE-VLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 245 HGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGS 297
GQLG HG P++I L E VV +AAG + LA T G V+ +G SG
Sbjct: 130 FGQLGVPHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTATGSVFQWGTGLASSGR 186
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
C G Q+ L A + R G+ V AG +H +L +G +Y WG+ G
Sbjct: 187 RLCPG---QNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQ 243
Query: 355 LGHGDEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
L + LP+ + + + V + +TG V+ +G +G LG
Sbjct: 244 LA-SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 237 (88.5 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 101/337 (29%), Positives = 153/337 (45%)
Query: 170 ASENHAAFVLQSGQV-FTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTAGL 225
A E+ A+ + + V F G NS GH++ +F P+ + C K VT G
Sbjct: 2 ARESCASETVSAAAVLFAWGANSYGQLGLGHKED---VFLPQQLSDFCQAGCIKSVTGGG 58
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ +T G + CG N GQLG G T + PL + Q+A G + + +T
Sbjct: 59 GHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGC-PIRQVACGWDFTIMLT 117
Query: 286 GNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
G V S GS + LG HG + + P+AI+ R K VV V+AG H +A ++G
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVV-PQAIECLREK---VVCVAAGLRHALATTATGS 173
Query: 344 VYTWGKGYCGA---LGHGDEIDK--TLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSV 396
V+ WG G + L G + T EP ++ L++ AV A + L DTG +
Sbjct: 174 VFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGEL 233
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH-----VSQISTGLYHTVVVTDRGRL 451
Y +G G L S V P + + AH+ V+ + +G H V T+ G++
Sbjct: 234 YVWGRNKHGQLA------SRAVFLP-LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKV 286
Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
F +G + QLG LEP E + +E+D+ LA
Sbjct: 287 FTWGRADYGQLGRR-----LEPPEAQ-KPVEQDSSLA 317
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 68/250 (27%), Positives = 108/250 (43%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+T G H+ ++++ +F CG + G LG G T + + FT + QV+ +
Sbjct: 54 VTGGGGHSAVVTDGGDLFVCGLNKDGQLGLG-HTEEVLRFTICKPLRGCPIRQVACGWDF 112
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLTI 233
+ + GQV +CG N+ G R P+ +E L+ V C V AGL T
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVC--VAAGLRHALATTA 170
Query: 234 RGHVHTCGSN--THGQ-LGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G V G+ + G+ L G L P + LE +V +A G + ++T
Sbjct: 171 TGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTD 229
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
G +Y +G + L L P+ I+ + V V +G H+VA +G V+T
Sbjct: 230 TGELYVWGRNKHGQLASRAVFLPL-PQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFT 288
Query: 347 WGKGYCGALG 356
WG+ G LG
Sbjct: 289 WGRADYGQLG 298
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 61/208 (29%), Positives = 90/208 (43%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ V SCGS+ G LG HGP +CV I VV V+A
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIEC-LREKVVCVAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA +G VF G + G R N P+F P V L+ AG
Sbjct: 162 LRHALATTATGSVFQWGTGLA-SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G ++ G N HGQL + P P+ I A + V + +G ++++A
Sbjct: 221 SDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVA 279
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
T G V+++G LG + E Q
Sbjct: 280 KTETGKVFTWGRADYGQLGRRLEPPEAQ 307
Score = 137 (53.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 46/155 (29%), Positives = 72/155 (46%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL-KSHLAVQVCAR 383
+ R S E V A + ++ WG G LG G + D LP+ LS ++ V
Sbjct: 1 MARESCASETVSA---AAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGG 57
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
+ V+ D G ++ G G LG G +++VLR I LR + Q++ G T+
Sbjct: 58 GGHSAVVTDGGDLFVCGLNKDGQLGL---GHTEEVLRFTICKPLRGCPIRQVACGWDFTI 114
Query: 444 VVTDRGRLFGFGDNERAQLG--HDTLRGCLEPTEI 476
++T++G++ G N QLG H R C+ P I
Sbjct: 115 MLTEKGQVLSCGSNAFGQLGVPHGP-RKCVVPQAI 148
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 270 (100.1 bits), Expect = 6.5e-20, P = 6.5e-20
Identities = 75/218 (34%), Positives = 105/218 (48%)
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV-TGNGVVYSFGSGSNFCLGHGEQ 306
L HG +L + ++PL+ + + P++++ T VY++G +NF LGHG Q
Sbjct: 106 LKHGVSLYMQDKEGLSPLD-----LLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQ 160
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ + P + F R G++V +V H V L G VYT G G G LGHGDE +P
Sbjct: 161 NSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVP 220
Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
+ L H QV A K T VL D G VY FG F LG S V R
Sbjct: 221 RLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKY 280
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
L+ + ++ G +HTV+ T R ++ G N QLGH
Sbjct: 281 LKGRTIIGVAAGRFHTVLWT-REAVYTLGLNG-GQLGH 316
Score = 202 (76.2 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 72/233 (30%), Positives = 103/233 (44%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S +V QV + H+ F+ Q GQV+TC
Sbjct: 142 TEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGRGGRLGHGDEQTCLV-PRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQ 260
Query: 248 LGH-GDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCLGH- 303
LG P+ I G +++ +AAG + + T V Y+ G +G LGH
Sbjct: 261 LGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTLGLNGGQ--LGHL 317
Query: 304 ----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
GE+ PR + K I V V+A D V + + G +Y C
Sbjct: 318 LDPNGEKC-VTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYLLADYQC 369
Score = 157 (60.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 67/247 (27%), Positives = 103/247 (41%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ ++H++ +S V++CG G LGHG E T C+ + S + QV+A+++
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQT-CLVPRLVEGLSGHNCSQVAAAKD 239
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 231
H + G V+T G N G PR ++A LKG V AG F L
Sbjct: 240 HTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAG-RFHTVL 298
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR------PTPKSIAPLEEVGSVVQ-IAAGPSYMLAV 284
R V+T G N GQLGH LD TP+ ++ L V +AA + V
Sbjct: 299 WTREAVYTLGLNG-GQLGH--LLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCV 355
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ----TFRRKGIHVVRVSAGDEHVVALDS 340
T G +Y C + L+ + ++ H+ V+A+D
Sbjct: 356 TTRGDIYLLADYQ--CKKMATKQLNLKKVLVSGGCMEYKVDPEHLTENGGQKICVLAMDG 413
Query: 341 SGYVYTW 347
+G V+ W
Sbjct: 414 AGRVFCW 420
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 267 (99.0 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 76/246 (30%), Positives = 127/246 (51%)
Query: 165 VVQVSASENHAAFVL--QSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++Q++ + H+ + Q G++F G N G T+ P P+LVE L GVP Q
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPT--PQLVEHLSGVPLVQ 194
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
++AG + L++ G++++ G N GQLG G T P I L+ V +A G S+
Sbjct: 195 ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQ-KVEFLACGGSH 253
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE-HVVALD 339
+T +G+V++FG+G LGH +EL+PR + G V +V+ G H +A
Sbjct: 254 TALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELA--GNRVTQVACGSRWHTLAYV 311
Query: 340 SS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVY 397
S G V+++G G G LG+G ++ +P P+ L S+ ++ +R K +++ G+
Sbjct: 312 SDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMK-LPSNEELKFESRTSEKELIMIAGGNQS 370
Query: 398 GFGWMG 403
WMG
Sbjct: 371 ILLWMG 376
Score = 255 (94.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 75/221 (33%), Positives = 110/221 (49%)
Query: 99 SVEHSS--DIVETSAGNMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVS 153
S+EH+S + +QIT G YH+L +S +F+ G +L G LG G T +
Sbjct: 121 SIEHASRFQCILQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPT 180
Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
+ S +VQ+SA + H+ + SG +++ G N G TN F P L+EAL
Sbjct: 181 PQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDF-PSLIEAL 239
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
+ + G + T LT G V T G+ +GQLGH T + P+ + L V Q
Sbjct: 240 DNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAG-NRVTQ 298
Query: 274 IAAGPSY-MLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
+A G + LA V+ G V+SFGSG LG+G H++L P
Sbjct: 299 VACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 339
Score = 240 (89.5 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 64/219 (29%), Positives = 110/219 (50%)
Query: 270 SVVQIAAGPSYMLAVT-GNG-VVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVV 326
S++QI G + LA++ G G ++++G + LG G + P+ ++ G+ +V
Sbjct: 136 SIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHL--SGVPLV 193
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
++SAG H +AL SG +Y+WG+ G LG G + P + +L + +
Sbjct: 194 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSH 253
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL-YHTVV- 444
T +L G V+ FG +G LG + LRPR++ L + V+Q++ G +HT+
Sbjct: 254 TALLTKDGLVFTFGAGKYGQLG---HNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAY 310
Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
V+D G++F FG + QLG+ L P + + EE
Sbjct: 311 VSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEE 349
Score = 185 (70.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 58/224 (25%), Positives = 103/224 (45%)
Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
R PK L + + + G +ML ++ +G + + N+ + H + +
Sbjct: 81 RSKPKKCIKLGKKMKIHSVDQGAEHMLILSSDGKPFEY----NYSIEHASRFQCI----- 131
Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSS--GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
+ K I ++++ GD H +AL G ++ WG+ G LG G + ++P P L
Sbjct: 132 --LQEKSI--IQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVG-RLFTSIPTP--QLV 184
Query: 374 SHLA----VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
HL+ VQ+ A K + L +G++Y +G G LG D P ++++L
Sbjct: 185 EHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDF---PSLIEALDN 241
Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
V ++ G HT ++T G +F FG + QLGH++ + L P
Sbjct: 242 QKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRP 285
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 251 (93.4 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 83/292 (28%), Positives = 137/292 (46%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+++F+ G++ G LG G + + +F V +++ H+A V G +F CG
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 74
Query: 189 DNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
N GH + + P F P ++L G P +QV G +FT LT G V +CGSN+ G
Sbjct: 75 LNKDGQLGLGHTE-DIPYFTP--CKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG 131
Query: 247 QLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
QLG HG P++I +E VV IAAG + +A T +G+V+ +G+G C G
Sbjct: 132 QLGVPHGPRRC-VVPQAIELHKE--KVVCIAAGLRHAVAATASGIVFQWGTGLASC-GRR 187
Query: 305 EQHDELQP---RAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
+ P A + R G+ + V AG +H +L +G VY WG G L +
Sbjct: 188 LCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN- 246
Query: 359 DEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
+ +P+ + + ++ + + +TG ++ +G +G LG
Sbjct: 247 EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 242 (90.2 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 104/334 (31%), Positives = 155/334 (46%)
Query: 169 SASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
SASE A + +F G NS GH++ + +L + K +++T G
Sbjct: 6 SASEAAPA----AAALFAWGANSYGQLGLGHKED--VLLPQQLNDFCKPRSVRRITGGGG 59
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TP-KSI--APLEEVGSVVQIAAGPSYM 281
+ +T G + CG N GQLG G T D P TP KS+ P++ Q+A G +
Sbjct: 60 HSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQ------QVACGWDFT 113
Query: 282 LAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ +T NG V S GS S LG HG + + P+AI+ + K VV ++AG H VA
Sbjct: 114 IMLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIELHKEK---VVCIAAGLRHAVAAT 169
Query: 340 SSGYVYTWGKGY--CGA-LGHGDEIDK--TLPEP--LSSLKSHLAVQVCARKRKTFVLVD 392
+SG V+ WG G CG L G + T EP ++ L++ A+ V A + L D
Sbjct: 170 ASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTD 229
Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----HVSQISTGLYHTVVVTD 447
G VY +G G L ++ P + + AH V+ I +G H V T+
Sbjct: 230 AGEVYVWGSNKHGQLA------NEAAFLP-VPQKIEAHCFQNEKVTAIWSGWTHLVAQTE 282
Query: 448 RGRLFGFGDNERAQLGH--DTLRGC-LEPTEIFI 478
G++F +G + QLG +T G LE + F+
Sbjct: 283 TGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFL 316
Score = 174 (66.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 63/199 (31%), Positives = 91/199 (45%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 105 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA SG VF G + CG R P+F P V L+ V AG
Sbjct: 162 LRHAVAATASGIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G V+ GSN HGQL + + P P+ I A + V I +G ++++A
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 279
Query: 284 VTGNGVVYSFGSGSNFCLG 302
T G ++++G LG
Sbjct: 280 QTETGKMFTWGRADYGQLG 298
Score = 153 (58.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 61/210 (29%), Positives = 84/210 (40%)
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
PS A ++++G+ S LG G + D L P+ + F K V R++ G H
Sbjct: 5 PSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC-KPRSVRRITGGGGHSAV 63
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ G ++ G G LG G D P SL QV T +L + G V
Sbjct: 64 VTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVL 123
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
G FG LG P G V+ P+ ++ L V I+ GL H V T G +F +G
Sbjct: 124 SCGSNSFGQLGVP-HGPRRCVV-PQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWGTG 180
Query: 458 ERAQLGHDTLRGCLEPTEIFIQEMEEDTGL 487
A G G P +E TGL
Sbjct: 181 -LASCGRRLCPGQTLPLFFTAKEPSRVTGL 209
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 245 (91.3 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 89/299 (29%), Positives = 133/299 (44%)
Query: 126 ISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
+S ++V F+ G++ G LG G + + +F + + V+ H+ V G +
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGL 70
Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
F CG N G T + R + + L G P +QV G +FT LT +G V +CGSN
Sbjct: 71 FVCGLNKDGQLGLGHTEE-VLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 245 HGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGS 297
GQLG HG P++I L E VV +AAG + LA T G + +G SG
Sbjct: 130 FGQLGVPHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTDTGSTFQWGTGLASSGR 186
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
C G Q+ L A + R G+ VV AG +H +L +G +Y WG+ G
Sbjct: 187 RLCPG---QNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQ 243
Query: 355 LGHGDEIDKTLPEPLSSLKSHL-----AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
L + LP P +++H V + +TG V+ +G +G LG
Sbjct: 244 LA---SLATFLPLP-QRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 207 (77.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 96/334 (28%), Positives = 151/334 (45%)
Query: 170 ASENHAAFVLQSGQV-FTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
A E+ A+ + + V F G NS GH++ + +L + K K VT G
Sbjct: 2 ARESCASEAVSAAAVLFAWGANSYGQLGLGHKED--VLLPQQLSDFCKSGCIKSVTGGGG 59
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT 285
+ +T G + CG N GQLG G T + PL +G + Q+A G + + +T
Sbjct: 60 HSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRFTICKPL--LGCPIRQVACGWDFTIMLT 117
Query: 286 GNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
G V S GS + LG HG + + P+AI+ R K VV V+AG H +A +G
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVV-PQAIECLREK---VVCVAAGLRHALATTDTGS 173
Query: 344 VYTWGKGYCGA---LGHGDEIDK--TLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSV 396
+ WG G + L G + T EP ++ L+S V A + L DTG +
Sbjct: 174 TFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGEL 233
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVSQISTGLYHTVVVTDRGRLFGF 454
Y +G G L ++ + P+ +++ + V+ + +G H V T+ G++F +
Sbjct: 234 YVWGRNKHGQLA----SLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTW 289
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
G + QLG TL G E + E+D+ LA
Sbjct: 290 GRADYGQLGR-TL-GSPEAQK----HGEQDSSLA 317
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 67/250 (26%), Positives = 108/250 (43%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+T G H++++++ +F CG + G LG G T + + FT + QV+ +
Sbjct: 54 VTGGGGHSVVVTDGGGLFVCGLNKDGQLGLG-HTEEVLRFTICKPLLGCPIRQVACGWDF 112
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLTI 233
+ + GQV +CG N+ G R P+ +E L+ V C V AGL T
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVC--VAAGLRHALATTD 170
Query: 234 RGHVHTCGSN--THGQ-LGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G G+ + G+ L G L P + LE +VV AG + ++T
Sbjct: 171 TGSTFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLES-STVVCAVAGSDHSASLTD 229
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
G +Y +G + L L P+ ++ + V V +G H+VA +G V+T
Sbjct: 230 TGELYVWGRNKHGQLASLATFLPL-PQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFT 288
Query: 347 WGKGYCGALG 356
WG+ G LG
Sbjct: 289 WGRADYGQLG 298
Score = 148 (57.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 66/237 (27%), Positives = 99/237 (41%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ V SCGS+ G LG HGP +CV I VV V+A
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIEC-LREKVVCVAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA +G F G + G R N P+F P V L+ AG
Sbjct: 162 LRHALATTDTGSTFQWGTGLA-SSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G ++ G N HGQL T P P+ + A + V + +G ++++A
Sbjct: 221 SDHSASLTDTGELYVWGRNKHGQLASLATF-LPLPQRVEAHYFQDEKVTAVWSGWTHLVA 279
Query: 284 VTGNGVVYSFGSGSNFCLG----------HGEQHDELQPRAIQTFRRKGIHVVRVSA 330
T G V+++G LG HGEQ L + +Q +H + +A
Sbjct: 280 KTETGKVFTWGRADYGQLGRTLGSPEAQKHGEQDSSLAFQRLQNSVPSPLHCLTGAA 336
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 170 (64.9 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 40/130 (30%), Positives = 64/130 (49%)
Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
HT+LI+ + G + G LG + T I ++VQ + +H F+
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTD 186
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
+G V+ CG+N S CG +T+ I+ P + +G P ++ G F+ L I+G +HT
Sbjct: 187 TGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTF 245
Query: 241 GSNTHGQLGH 250
G +GQLGH
Sbjct: 246 GLPEYGQLGH 255
Score = 136 (52.9 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 48/187 (25%), Positives = 81/187 (43%)
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ P++ V +V A G ++ +A+ VYS+G G LGH E DE+ PR ++ F +
Sbjct: 291 VTPVDGV-QIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQ 349
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV- 380
G V G + ++ G ++ +G+ G + P+P+ L +
Sbjct: 350 GRGGRSVFCGSTFSLIVNELGLLFLFGQNK--KTGEAN----MYPKPVQDLSGWNITDIG 403
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
CA DT +G FG LG + S V P+ + L + Q++ G
Sbjct: 404 CANTSIMISADDTLIAWGAS-PTFGELGIGEFQKSSTV--PKEVPKLDNIKIPQVTMGYS 460
Query: 441 HTVVVTD 447
HTV++ D
Sbjct: 461 HTVLLVD 467
Score = 110 (43.8 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 42/187 (22%), Positives = 79/187 (42%)
Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
V + GV G N T + + V++ G G+LGH + D P+ + + G
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQG 350
Query: 270 SVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
+ + G ++ L V G+++ FG GE + + P+ +Q G ++ +
Sbjct: 351 RGGRSVFCGSTFSLIVNELGLLFLFGQNKKT----GEAN--MYPKPVQDL--SGWNITDI 402
Query: 329 SAGDEHVVALDSSGYVYTWGKGYC-GALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRK 386
+ ++ + + + WG G LG G+ + T+P+ + L + QV
Sbjct: 403 GCANTSIM-ISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSH 461
Query: 387 TFVLVDT 393
T +LVDT
Sbjct: 462 TVLLVDT 468
Score = 80 (33.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 38/185 (20%), Positives = 77/185 (41%)
Query: 7 LFSIEELPSHLIFEILTSGRLSAV-DLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
L ++E+ P ++ + + L+ D ++ H +K+R + AS
Sbjct: 69 LATLEKTPGQMLIAGMVTWDLTGKRDRKNVTKVRPNLYSFHRFTEEKYRYV----ASGPS 124
Query: 66 ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM-QITTGRYHTL 124
A H+I M R + +G + + ++ E + I N+ Q GR+HTL
Sbjct: 125 AAHTILINMDRKA-LGFGRNPSGQLG-LSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTL 182
Query: 125 LISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
++++ +V++CG + G G G S T IN+ ++++ + + G
Sbjct: 183 FLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPP-IIRIGCGAEFSVILDIKGS 241
Query: 184 VFTCG 188
+ T G
Sbjct: 242 LHTFG 246
Score = 71 (30.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 389 VLVDTGS-VYGFGWMGFGSLGFPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVV 445
V +D+ VY +G+ GFG LG + D+++ PR++ + + G +++V
Sbjct: 310 VAIDSKKRVYSWGFGGFGRLGHAEP--KDEMV-PRLMKFFDTQGRGGRSVFCGSTFSLIV 366
Query: 446 TDRGRLFGFGDNER 459
+ G LF FG N++
Sbjct: 367 NELGLLFLFGQNKK 380
Score = 48 (22.0 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
+ + G HTV + + R++ +G +LGH
Sbjct: 299 IVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGH 331
Score = 45 (20.9 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 20/77 (25%), Positives = 32/77 (41%)
Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF---PSAAHVVQV--SASENHA 175
+ +L S+ + G G LGH + V+ +++F S VV + E H
Sbjct: 232 FSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHV 291
Query: 176 AFVLQSGQV--FTCGDN 190
V Q+ F CG+N
Sbjct: 292 TPV-DGVQIVDFACGNN 307
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 177 (67.4 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 36/101 (35%), Positives = 56/101 (55%)
Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
G++V +A G S+ +T G +Y++G G ++ LGHG +++ ++P Q F G V V
Sbjct: 1022 GNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPH--QVFEPNGAKWVNV 1079
Query: 329 SAGDEHVVALDSSGYVYTWGK---GYCGALG--HGDEIDKT 364
S G+ H +A G V+ WGK G CG L +G+ D T
Sbjct: 1080 SLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKNGNSADVT 1120
Score = 167 (63.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/141 (33%), Positives = 72/141 (51%)
Query: 328 VSAGDEHVVALDSSGYVYTWGK---GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
++ G EH++ L SSG + WG G CG +GH I L + + + C +
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCG-VGHSFRI-ANLHQVDGDWPAIEKI-ACGQF 837
Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
F+ D GS++ FGW +G LG R S++++ R+ + L V+QI+ G HTVV
Sbjct: 838 HSAFICSD-GSLWTFGWGVWGQLGHGGRNNSNQLVPTRV-NGLICK-VTQIACGRAHTVV 894
Query: 445 VTDRGRLFGFGDNERAQLGHD 465
+TD GR+ G Q+G D
Sbjct: 895 LTDTGRVLVCGSGSYGQMGVD 915
Score = 164 (62.8 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 60/213 (28%), Positives = 95/213 (44%)
Query: 253 TLDRPTPKSIAPLEEV-----GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQ 306
TL P PK L V G IA G ++L ++ +G + ++G G+ F G G
Sbjct: 755 TLPPPAPKPEQHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWG-GNRF--GQCGVG 811
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG--DEIDKT 364
H + + + +++ G H + S G ++T+G G G LGHG + ++
Sbjct: 812 HS-FRIANLHQVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQL 870
Query: 365 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
+P ++ L + C R T VL DTG V G +G +G D P L
Sbjct: 871 VPTRVNGLICKVTQIACGRAH-TVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPL 929
Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
LR V I+T YH++ +T+ R+F +G N
Sbjct: 930 GPLR---VRDIATHYYHSICITEDNRVFEWGRN 959
Score = 141 (54.7 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 53/202 (26%), Positives = 92/202 (45%)
Query: 101 EHSSDIVETSAGNMQ-ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRIN 158
+H ++E G + I G H L++S+S S G + G G G + + + +++
Sbjct: 765 QHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVG-HSFRIANLHQVD 823
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVP 217
A + +++ + H+AF+ G ++T G GH N +LV + G+
Sbjct: 824 GDWPA-IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNS---NQLVPTRVNGLI 879
Query: 218 CK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVV 272
CK Q+ G T LT G V CGS ++GQ+G D + + TP + PL V
Sbjct: 880 CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR----VR 935
Query: 273 QIAAGPSYMLAVTGNGVVYSFG 294
IA + + +T + V+ +G
Sbjct: 936 DIATHYYHSICITEDNRVFEWG 957
Score = 140 (54.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 51/176 (28%), Positives = 80/176 (45%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
PR++E G P + + G L+ G + G N GQ G G + IA L
Sbjct: 768 PRVLEYPGGRP-RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF------RIANLH 820
Query: 267 EVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
+V ++ +IA G + + +G +++FG G LGHG +++ Q + T R G
Sbjct: 821 QVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQ--LVPT-RVNG 877
Query: 323 I--HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLK 373
+ V +++ G H V L +G V G G G +G D+I K P PL L+
Sbjct: 878 LICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR 933
Score = 125 (49.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 28/85 (32%), Positives = 40/85 (47%)
Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
++V V+ G H + S G +YTWGKG LGHG++ ++ P + V V
Sbjct: 1023 NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLG 1082
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLG 408
T D GSV+ +G FG G
Sbjct: 1083 NNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 78 (32.5 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
++ ++ GL H+ ++T G L+ +G QLGH +EP ++F
Sbjct: 1023 NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVF 1069
Score = 69 (29.3 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG-SLGFPDRGVSDKVLR 420
D L E L ++ C + + G++Y +G G LG G ++ +
Sbjct: 1010 DLGLREVKHFLDGNIVSVACGLSHSALITSE-GTLYTWG-KGLDYQLG---HGNKNERME 1064
Query: 421 P-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
P ++ + A V+ +S G HT+ TD G +F +G N+ Q G
Sbjct: 1065 PHQVFEPNGAKWVN-VSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 37 (18.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 73 GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDI 106
G+ + +I L++ +G+W + + HS+ I
Sbjct: 809 GVGHSFRIANLHQVDGDWPAIEKIACGQFHSAFI 842
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 259 (96.2 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 64/215 (29%), Positives = 107/215 (49%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVS 329
++QI G + LA++ G ++++G + LG G + P+ ++ G+ + ++S
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA--GVPLAQIS 197
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
AG+ H +AL SG +Y+WGK CG LG G K P + L + V + +
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSAL 257
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDR 448
L G ++ FG G LG + LRP ++ L + V+QI+ G +HT+ V+D
Sbjct: 258 LTQDGLLFTFGAGKHGQLG---HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL 314
Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
G++F FG + QLG+ R L P + + EE
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEE 349
Score = 258 (95.9 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 65/232 (28%), Positives = 116/232 (50%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
++Q++ + H+ + + G++F G N G P++VE L GVP Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+ L++ G++++ G N GQLG G T + P I L+ V +A G S+ +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQ-KVEFVACGGSHSALL 258
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
T +G++++FG+G + LGH +EL+P + G V +++ G H +A S G
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLGK 316
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
V+++G G G LG+G D+ +P P+ S K +++ G+
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGN 368
Score = 251 (93.4 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 73/241 (30%), Positives = 117/241 (48%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QIT G YH+L +S +F+ G +L G LG G + + + + + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
H+ + SG +++ G N GH ++ P L+E L + V G + +
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFVACGGSHSAL 257
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
LT G + T G+ HGQLGH T + P +A L VG V QIA G + LA V+ G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
V+SFGSG + LG+G D+L P ++ + + + ++ E ++ + + W
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375
Query: 349 K 349
K
Sbjct: 376 K 376
Score = 201 (75.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 60/204 (29%), Positives = 96/204 (47%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGP 278
Q+T G + L+ G + G N HGQLG G TP+ + L V + QI+AG
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV-PLAQISAGE 200
Query: 279 SYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
++ +A++ +G +YS+G LGH E D+ P I+ + + V + G H
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEFV--ACGGSHSA 256
Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS 395
L G ++T+G G G LGH ++ P ++ L + Q+ C R + D G
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGK 316
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVL 419
V+ FG G LG + G D+++
Sbjct: 317 VFSFGSGKDGQLG--NGGTRDQLM 338
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 251 (93.4 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 83/292 (28%), Positives = 137/292 (46%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+++F+ G++ G LG G + + +F V +++ H+A V G +F CG
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 74
Query: 189 DNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
N GH + + P F P ++L G P +QV G +FT LT G V +CGSN+ G
Sbjct: 75 LNKDGQLGLGHTE-DIPYFTP--CKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG 131
Query: 247 QLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
QLG HG P++I +E VV IAAG + +A T +G+V+ +G+G C G
Sbjct: 132 QLGVPHGPRRC-VVPQAIELHKE--KVVCIAAGLRHAVAATASGIVFQWGTGLASC-GRR 187
Query: 305 EQHDELQP---RAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
+ P A + R G+ + V AG +H +L +G VY WG G L +
Sbjct: 188 LCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN- 246
Query: 359 DEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
+ +P+ + + ++ + + +TG ++ +G +G LG
Sbjct: 247 EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 242 (90.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 104/334 (31%), Positives = 155/334 (46%)
Query: 169 SASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
SASE A + +F G NS GH++ + +L + K +++T G
Sbjct: 6 SASEAAPA----AAALFAWGANSYGQLGLGHKED--VLLPQQLNDFCKPRSVRRITGGGG 59
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TP-KSI--APLEEVGSVVQIAAGPSYM 281
+ +T G + CG N GQLG G T D P TP KS+ P++ Q+A G +
Sbjct: 60 HSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQ------QVACGWDFT 113
Query: 282 LAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ +T NG V S GS S LG HG + + P+AI+ + K VV ++AG H VA
Sbjct: 114 IMLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIELHKEK---VVCIAAGLRHAVAAT 169
Query: 340 SSGYVYTWGKGY--CGA-LGHGDEIDK--TLPEP--LSSLKSHLAVQVCARKRKTFVLVD 392
+SG V+ WG G CG L G + T EP ++ L++ A+ V A + L D
Sbjct: 170 ASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTD 229
Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----HVSQISTGLYHTVVVTD 447
G VY +G G L ++ P + + AH V+ I +G H V T+
Sbjct: 230 AGEVYVWGSNKHGQLA------NEAAFLP-VPQKIEAHCFQNEKVTAIWSGWTHLVAQTE 282
Query: 448 RGRLFGFGDNERAQLGH--DTLRGC-LEPTEIFI 478
G++F +G + QLG +T G LE + F+
Sbjct: 283 TGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFL 316
Score = 174 (66.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 63/199 (31%), Positives = 91/199 (45%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 105 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA SG VF G + CG R P+F P V L+ V AG
Sbjct: 162 LRHAVAATASGIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G V+ GSN HGQL + + P P+ I A + V I +G ++++A
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 279
Query: 284 VTGNGVVYSFGSGSNFCLG 302
T G ++++G LG
Sbjct: 280 QTETGKMFTWGRADYGQLG 298
Score = 153 (58.9 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 61/210 (29%), Positives = 84/210 (40%)
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
PS A ++++G+ S LG G + D L P+ + F K V R++ G H
Sbjct: 5 PSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC-KPRSVRRITGGGGHSAV 63
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ G ++ G G LG G D P SL QV T +L + G V
Sbjct: 64 VTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVL 123
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
G FG LG P G V+ P+ ++ L V I+ GL H V T G +F +G
Sbjct: 124 SCGSNSFGQLGVP-HGPRRCVV-PQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWGTG 180
Query: 458 ERAQLGHDTLRGCLEPTEIFIQEMEEDTGL 487
A G G P +E TGL
Sbjct: 181 -LASCGRRLCPGQTLPLFFTAKEPSRVTGL 209
Score = 137 (53.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 52/183 (28%), Positives = 80/183 (43%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APL 265
P V L+ V AG + + LT G V+ GSN HGQL + + P P+ I A
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHC 261
Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH------G---EQHDEL-----Q 311
+ V I +G ++++A T G ++++G LG G E+ D
Sbjct: 262 FQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRP 321
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
P ++ + VS G EH +A+ G Y+WG G G G E + P+P+ +
Sbjct: 322 PNSMPSSPHCLTGATEVSCGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQA 380
Query: 372 LKS 374
L S
Sbjct: 381 LLS 383
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 254 (94.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 87/300 (29%), Positives = 135/300 (45%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG T
Sbjct: 387 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHG-SLTDIS 438
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + G++F G D G R+++ P+ V
Sbjct: 439 QPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNC---PQQV 495
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRP---------- 257
+ G ++V G++ + LT G V CGSN +LG D L + P
Sbjct: 496 PMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGL-DCLSLEEEPVPHQQVEEAL 554
Query: 258 --TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
TP APL+ +++ + G ++ AVT +G Y+FGS + LG + P +
Sbjct: 555 SFTPLGSAPLDRE-TLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRV 613
Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
Q +GI +V V+ GD VA+ + G VY+WGKG G LG DE D LP P+ ++H
Sbjct: 614 QGL--EGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDE-DAGLPRPVQLDETH 670
Score = 238 (88.8 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 95/343 (27%), Positives = 148/343 (43%)
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFT-----CGDNS-SFCCGHRDTNRPIFRPRL 209
R+ P+ VVQV+A A V +SG++ G + G + +P F R
Sbjct: 332 RLPMPNT-EVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRF 390
Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
+E GV K V G FT LT RG + T GS ++G LGHG D P + L +G
Sbjct: 391 LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL--LG 448
Query: 270 -SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
+VQ+A G S++LA++ +G ++++G G LG G + P+ + G RV
Sbjct: 449 YEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMV--PGQEAQRV 506
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK---R 385
G + + L S G V G LG + P P ++ L+ R
Sbjct: 507 VCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDR 566
Query: 386 KTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
+T + VD +G+ Y FG G LG R VS R + L+ ++ +
Sbjct: 567 ETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIK---MVM 623
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEI 476
++ G TV + G ++ +G R +LG D G P ++
Sbjct: 624 VACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQL 666
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 258 (95.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 64/175 (36%), Positives = 86/175 (49%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
VY++G +NF LGHG Q+ + P + F R G+++ +V H V L G VYT G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LGHGDE +P + L H QV A K T VL + G VY FG F LG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI 263
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
+ V R L+ + ++ G +HTV+ T R ++ G N QLGH
Sbjct: 264 IPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWT-REAVYTLGLNG-GQLGH 316
Score = 197 (74.4 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 70/236 (29%), Positives = 105/236 (44%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S ++ QV + H+ F+ Q GQV+TC
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGPGGRLGHGDEQTCLV-PRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQ 260
Query: 248 LGH-GDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCLGH- 303
LG + P+ + G +++ +AAG + + T V Y+ G +G LGH
Sbjct: 261 LGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTLGLNGGQ--LGHL 317
Query: 304 ----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
GE+ PR + K I + V+A D V + + G +Y C L
Sbjct: 318 LDPSGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTARGDIYLLADYQCKKL 372
Score = 148 (57.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q+ +H ++V+ + + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 160 QNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CL 218
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ S + QV+A+++H + + G V+T G N G PR ++A
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSNCNVPRQMQA 278
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
LKG V AG F L R V+T G N GQLGH LD K + +V +
Sbjct: 279 KYLKGRTIIGVAAG-RFHTVLWTREAVYTLGLNG-GQLGH--LLDPSGEKCVTAPRQVSA 334
Query: 271 VVQ-------IAAGPSYMLAVTGNGVVY 291
+ +AA + VT G +Y
Sbjct: 335 LHHKDIALSLVAASDGATVCVTARGDIY 362
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 250 (93.1 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 92/352 (26%), Positives = 153/352 (43%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-----RDTN-----RPIFR--PRLVE- 211
VV ++ H+A + G+V+T G N + G +D N + P VE
Sbjct: 110 VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG 169
Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVG 269
AL + +V N T +T G T G+ + G LG+ D+ R + L E+
Sbjct: 170 ALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEI- 228
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRV 328
Q+A G +++A+T G VY++G+G F LG + LQ Q K I + V
Sbjct: 229 --CQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNI--ISV 284
Query: 329 SAGDEHVVALDSSGYVYTWGKGY---CGALGHGDEIDKTLPEP--LSSLKSHLAVQVCAR 383
AG H A+D+ G VY WG CG +E + +P + +L+ + +
Sbjct: 285 GAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGG 344
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-----------PRILDSLRAHHV 432
+ T L++ G V +G LG PD + + V++ P I+ L +V
Sbjct: 345 EHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLT--NV 402
Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEIFIQEMEE 483
Q+ G +H + VT G+++ +G E ++G D PT + + ++E
Sbjct: 403 IQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKE 454
Score = 219 (82.2 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 77/303 (25%), Positives = 137/303 (45%)
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGFLTIRGHVHTCG 241
VF G + G + + ++RPRL L V + G + L+ G V+T G
Sbjct: 75 VFGSGSMNELGMGEEEMD-VVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWG 133
Query: 242 SNTHGQLG---------HGDTLDRP----TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
N LG +GD +D TP + V ++ + A+T NG
Sbjct: 134 VNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNG 193
Query: 289 VVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
+++G+ S+ LG+ + Q R + + + + +++ G +H++AL ++G VYT
Sbjct: 194 CCFTWGTFRCSDGVLGYSDS----QKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYT 249
Query: 347 WGKGYCGALGHG----DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
WG G LG + P+PL+ LK+ + V A +F + + G VY +G
Sbjct: 250 WGNGQQFQLGRRMLERRRLQGLTPQPLA-LKN--IISVGAGSYHSFAIDNKGRVYAWGLN 306
Query: 403 GFGSLGFP--DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
G D + +P ++D+L ++V I+ G +HT+ + + GR+ +G ++R
Sbjct: 307 ITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRH 366
Query: 461 QLG 463
QLG
Sbjct: 367 QLG 369
Score = 183 (69.5 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 59/196 (30%), Positives = 89/196 (45%)
Query: 290 VYSFGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
VY FGSGS LG GE+ ++ +PR + VV ++ G H AL G VYTW
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 348 GKGYCGALG---------HGDEIDKTL----PEPLSSLKSHLAV-QVCARKRKTFVLVDT 393
G ALG +GD++D L P + SHL V +V T + D
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDN 192
Query: 394 GSVYGFGWM--GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
G + +G G LG+ D + P +R + Q++TG H + +T G++
Sbjct: 193 GCCFTWGTFRCSDGVLGYSDS--QKRTAEPT---QMRLPEICQLATGTDHIIALTTTGKV 247
Query: 452 FGFGDNERAQLGHDTL 467
+ +G+ ++ QLG L
Sbjct: 248 YTWGNGQQFQLGRRML 263
Score = 164 (62.8 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 64/232 (27%), Positives = 103/232 (44%)
Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASE 172
Q+ TG H + L + V++ G+ LG E + T + +++ V A
Sbjct: 230 QLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL-ALKNIISVGAGS 288
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
H+ + G+V+ G N + CG + I +P LV+AL+G K +T G + T
Sbjct: 289 YHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHT 348
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKS--------IAP--LEEVGSVVQIAAG 277
L G V G + QLG D L K P + + +V+Q+ G
Sbjct: 349 LALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCG 408
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRV 328
+ LAVT +G VYS+GS N+ +G G+ +++ A+ T R K I V +
Sbjct: 409 THHNLAVTSDGKVYSWGSAENYEVGQGDNDEDV---AVPTLVRSKAIKEVAI 457
Score = 164 (62.8 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 67/238 (28%), Positives = 100/238 (42%)
Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRIN---FPSAAHVVQVSASENHAAFVLQSGQVFT 186
+V+ GS LG G E V R+N VV ++ H+A + G+V+T
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Query: 187 CGDNSSFCCGH-----RDTN-----RPIFR--PRLVE-ALKGVPCKQVTAGLNFTGFLTI 233
G N + G +D N + P VE AL + +V N T +T
Sbjct: 132 WGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITD 191
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLE-EVGSVVQIAAGPSYMLAVTGNGVVY 291
G T G+ + G + K A P + + + Q+A G +++A+T G VY
Sbjct: 192 NGCCFTWGTF---RCSDGVLGYSDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVY 248
Query: 292 SFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
++G+G F LG + LQ Q K I + V AG H A+D+ G VY WG
Sbjct: 249 TWGNGQQFQLGRRMLERRRLQGLTPQPLALKNI--ISVGAGSYHSFAIDNKGRVYAWG 304
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 69/284 (24%), Positives = 120/284 (42%)
Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL-TIRGHVHTCGSNTHGQLGHG----D 252
++ +P+ R ++ K V +N L T R +V+ GS + +LG G D
Sbjct: 33 KNGKKPVKRAKVSSLPKPVRVPGSAKRINKIPELPTERLNVYVFGSGSMNELGMGEEEMD 92
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQHDEL 310
+ RP I ++VG VV +A G + A++ +G VY++G ++ LG +Q DE
Sbjct: 93 VVYRPRLNPILSTDKVG-VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDEN 151
Query: 311 QPRAIQTF------RRKG----IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-D 359
+ + +G + V +V D A+ +G +TWG C G
Sbjct: 152 GDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYS 211
Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
+ K EP + ++ Q+ L TG VY +G LG R + + L
Sbjct: 212 DSQKRTAEP-TQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLG--RRMLERRRL 268
Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ L ++ + G YH+ + ++GR++ +G N Q G
Sbjct: 269 QGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCG 312
Score = 145 (56.1 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPC 218
S V +V S+N A + +G FT G S G+ D+ + P + L + C
Sbjct: 172 SHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMR-LPEI-C 229
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAG 277
Q+ G + LT G V+T G+ QLG L+R + + P + +++ + AG
Sbjct: 230 -QLATGTDHIIALTTTGKVYTWGNGQQFQLGRR-MLERRRLQGLTPQPLALKNIISVGAG 287
Query: 278 PSYMLAVTGNGVVYSFGSG-SNFCLGHGEQHDE----LQPRAIQTFRRKGIHVVRVSAGD 332
+ A+ G VY++G + C E +E +P + +G +V ++ G+
Sbjct: 288 SYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDAL--EGYNVKSITGGE 345
Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
H +AL G V WG+ LG D LPE
Sbjct: 346 HHTLALLEDGRVLAWGRDDRHQLGIPDN---ALPE 377
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 69/280 (24%), Positives = 116/280 (41%)
Query: 125 LISNSSVFSCGSSLC--GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
+ N F+ G+ C GVLG+ + T++ P + Q++ +H + +G
Sbjct: 189 ITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPE---ICQLATGTDHIIALTTTG 245
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
+V+T G+ F G R R + + ALK + V AG + + +G V+
Sbjct: 246 KVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNII--SVGAGSYHSFAIDNKGRVYAW 303
Query: 241 GSNTHGQLG-------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G N Q G G + +PT + LE +V I G + LA+ +G V ++
Sbjct: 304 GLNITRQCGIEVEDEEEGAVITKPT--LVDALEGY-NVKSITGGEHHTLALLEDGRVLAW 360
Query: 294 GSGSNFCLGHGEQ-------HDELQPR---AIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
G LG + DE + T +V++V G H +A+ S G
Sbjct: 361 GRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGK 420
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
VY+WG +G GD D+ + P + ++S +V R
Sbjct: 421 VYSWGSAENYEVGQGDN-DEDVAVP-TLVRSKAIKEVAIR 458
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 247 (92.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 86/303 (28%), Positives = 132/303 (43%)
Query: 180 QSGQVFTC----GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
+SG+ F GD G+ D+ + P + AL V G T FLT
Sbjct: 45 ESGKRFAAMWGSGDYGRLGLGNLDSQ---WTPAVCSALSDHSITAVACGGAHTLFLTETR 101
Query: 236 HVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
V G N GQLG D P ++ L++ ++ I+AG + A+T +G +Y +G
Sbjct: 102 RVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK--DILHISAGYYHSAAITVDGELYMWG 159
Query: 295 SGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
S+ LG G++ + P ++ GI + V+ G EH VA+ G V +WG G
Sbjct: 160 KNSSGQLGLGKKAARVVRVPTKVEALH--GITIQSVALGSEHSVAVTDGGEVLSWGGGGS 217
Query: 353 GALGHGDEID---------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
G LGHG + + P + L+ V A + + GS + FG
Sbjct: 218 GRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKS 277
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+GF GV + P I+ + + +++ G YHT VVT G L+ +G NE LG
Sbjct: 278 INKMGFG--GVRNATT-PSIISEVP--YAEEVACGGYHTCVVTRGGELYTWGSNENGCLG 332
Query: 464 HDT 466
D+
Sbjct: 333 TDS 335
Score = 246 (91.7 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 102/389 (26%), Positives = 163/389 (41%)
Query: 82 LLNRCNGNWKRVLRFLQSVEHSSDIVETSA-GNMQITTGRYHTLLISNSSVFSCGSSLCG 140
+L R G + + +Q +S +++ S G + + R+ + GS G
Sbjct: 1 MLTRAIGRVRIPVSRIQGSNCTSGLLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYG 60
Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
LG G +Q + S + V+ H F+ ++ +VF G N G D
Sbjct: 61 RLGLGNLDSQWTPAV-CSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDV 119
Query: 201 NRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT- 258
P V L K + ++AG + +T+ G ++ G N+ GQLG G R
Sbjct: 120 KSHAMDPLEVSGLDKDI--LHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVR 177
Query: 259 -PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ---------HD 308
P + L + ++ +A G + +AVT G V S+G G + LGHG Q +
Sbjct: 178 VPTKVEALHGI-TIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNS 236
Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
E PR I+ +GI V V+AG H D +G + +G+ +G G + T P
Sbjct: 237 EFTPRLIKEL--EGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSI 294
Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR--ILDS 426
+S + A +V T V+ G +Y +G G LG VS +R L+S
Sbjct: 295 ISEVP--YAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLES 352
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
VSQ+S G HT ++D +F +G
Sbjct: 353 T----VSQVSCGWKHTAAISDNN-VFTWG 376
Score = 228 (85.3 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 94/354 (26%), Positives = 144/354 (40%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G HTL ++ + VF+ G + CG LG + + ++ ++ +SA H
Sbjct: 87 VACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK-DILHISAGYYH 145
Query: 175 AAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+A + G+++ G NSS G + R + P VEAL G+ + V G + +T
Sbjct: 146 SAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD 205
Query: 234 RGHVHTCGSNTHGQLGHG--DTL-------DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
G V + G G+LGHG +L TP+ I LE + V +AAG +
Sbjct: 206 GGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGI-KVTNVAAGLLHSACT 264
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
NG + FG S +G G + P I + V+ G H + G +
Sbjct: 265 DENGSAFMFGEKSINKMGFGGVRNATTPSIISEVP----YAEEVACGGYHTCVVTRGGEL 320
Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
YTWG G LG P + L+S ++ C K T + D +V+ +GW
Sbjct: 321 YTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKH-TAAISDN-NVFTWGWG 378
Query: 403 G----FGSLGFPDRGV----SD-KVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
G F G G SD RP ++D + IS G HT V +
Sbjct: 379 GSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLE 432
Score = 207 (77.9 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 65/246 (26%), Positives = 110/246 (44%)
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
GS +G+LG G+ + TP + L + S+ +A G ++ L +T V F +G N C
Sbjct: 55 GSGDYGRLGLGNLDSQWTPAVCSALSD-HSITAVACGGAHTLFLTETRRV--FATGLNDC 111
Query: 301 LGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
G +++ A+ G+ ++ +SAG H A+ G +Y WGK G LG G
Sbjct: 112 GQLGVS--DVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLG 169
Query: 359 DEIDKTLPEPLSSLKSH-LAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR---- 412
+ + + P H + +Q V + + D G V +G G G LG +
Sbjct: 170 KKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLF 229
Query: 413 GV--SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
G+ S+ PR++ L V+ ++ GL H+ + G F FG+ ++G +R
Sbjct: 230 GILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNA 289
Query: 471 LEPTEI 476
P+ I
Sbjct: 290 TTPSII 295
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 256 (95.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 65/175 (37%), Positives = 86/175 (49%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
VY++G +NF LGHG Q+ + P + F R GI++ +V H V L G VYT G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LGHGDE +P + L H QV A K T VL + G VY FG F LG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGL 263
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
S V R L+ + ++ G +HTV+ T R ++ G N QLG+
Sbjct: 264 IPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWT-REAVYTMGLNG-GQLGY 316
Score = 195 (73.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 67/236 (28%), Positives = 104/236 (44%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S ++ QV + H+ F+ Q GQV+TC
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGPGGRLGHGDEQTCLV-PRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQ 260
Query: 248 LGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG-SGSN--F 299
LG + P+ P+ + G +++ +AAG + + T V Y+ G +G +
Sbjct: 261 LG---LIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTMGLNGGQLGY 316
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
L + PR + K I + V+A D V + + G +Y C L
Sbjct: 317 LLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVTTKGDIYLLADYQCKKL 372
Score = 141 (54.7 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 58/208 (27%), Positives = 94/208 (45%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q+ +H ++V+ + + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 160 QNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CL 218
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ S + QV+A+++H + + G V+T G N G PR ++A
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGLIPPPSSCNVPRQMQA 278
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR------PTPKSIAP 264
LKG V AG F L R V+T G N GQLG+ LD P+ ++
Sbjct: 279 KYLKGRTIIGVAAG-RFHTVLWTREAVYTMGLNG-GQLGY--LLDPNGEKCVTAPRQVSA 334
Query: 265 LEEVGSVVQ-IAAGPSYMLAVTGNGVVY 291
L + +AA + VT G +Y
Sbjct: 335 LHHKDITLSLVAASDGATVCVTTKGDIY 362
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 252 (93.8 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 65/174 (37%), Positives = 85/174 (48%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
VY++G +NF LGHG Q+ + P + F R GI++ +V H V L G VYT G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LGHGDE +P + L H QV A K T VL + G VY FG F LG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI 263
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
S V R L+ + ++ G +HTV+ T R ++ G N QLG
Sbjct: 264 IPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWT-REAVYTMGLNG-GQLG 315
Score = 200 (75.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 70/234 (29%), Positives = 105/234 (44%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S ++ QV + H+ F+ Q GQV+TC
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGPGGRLGHGDEQTCLV-PRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQ 260
Query: 248 LGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG--SGSNFC 300
LG + P+ P+ I G +++ +AAG + + T V Y+ G G C
Sbjct: 261 LG---IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTMGLNGGQLGC 316
Query: 301 L--GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
L +GE+ PR + K I + V+A D V + + G +Y C
Sbjct: 317 LLDPNGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQC 369
Score = 140 (54.3 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q+ +H ++V+ + + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 160 QNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CL 218
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ + + QV+A+++H + + G V+T G N G PR ++A
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQA 278
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-----HGDTLDRPTPKSIAPL 265
LKG V AG F L R V+T G N GQLG +G+ P+ ++ L
Sbjct: 279 KYLKGRTIIGVAAG-RFHTVLWTREAVYTMGLNG-GQLGCLLDPNGEKCVT-APRQVSAL 335
Query: 266 EEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ----TFRR 320
+ +AA + VT G +Y C + L+ + ++
Sbjct: 336 HHKDIALSLVAASDGATVCVTTRGDIYLLADYQ--CKKMASKQLNLKKVLVSGGHMEYKV 393
Query: 321 KGIHVVRVSAGDEH-VVALDSSGYVYTW 347
H+ + + G + ++A+D +G V+ W
Sbjct: 394 DPEHL-KENGGQKICILAMDGAGRVFCW 420
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 252 (93.8 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 65/174 (37%), Positives = 85/174 (48%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
VY++G +NF LGHG Q+ + P + F R GI++ +V H V L G VYT G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LGHGDE +P + L H QV A K T VL + G VY FG F LG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI 263
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
S V R L+ + ++ G +HTV+ T R ++ G N QLG
Sbjct: 264 IPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWT-REAVYTMGLNG-GQLG 315
Score = 200 (75.5 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 70/234 (29%), Positives = 105/234 (44%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S ++ QV + H+ F+ Q GQV+TC
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGPGGRLGHGDEQTCLV-PRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQ 260
Query: 248 LGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG--SGSNFC 300
LG + P+ P+ I G +++ +AAG + + T V Y+ G G C
Sbjct: 261 LG---IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTMGLNGGQLGC 316
Query: 301 L--GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
L +GE+ PR + K I + V+A D V + + G +Y C
Sbjct: 317 LLDPNGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQC 369
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q+ +H ++V+ + + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 160 QNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CL 218
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ + + QV+A+++H + + G V+T G N G PR ++A
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQA 278
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-----HGDTLDRPTPKSIAPL 265
LKG V AG F L R V+T G N GQLG +G+ P+ ++ L
Sbjct: 279 KYLKGRTIIGVAAG-RFHTVLWTREAVYTMGLNG-GQLGCLLDPNGEKCVT-APRQVSAL 335
Query: 266 EEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ----TFRR 320
+ +AA + VT G +Y C + L+ + ++
Sbjct: 336 HHKDIALSLVAASDGATVCVTTRGDIYLLADYQ--CKKMASKQLNLKKVLVSGGHMEYKV 393
Query: 321 KGIHVVRVSAGDEH-VVALDSSGYVYTW 347
H+ + + G + ++A+D +G V+ W
Sbjct: 394 DPEHL-KENGGQKICILAMDGAGRVFCW 420
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 252 (93.8 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 65/174 (37%), Positives = 85/174 (48%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
VY++G +NF LGHG Q+ + P + F R GI++ +V H V L G VYT G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LGHGDE +P + L H QV A K T VL + G VY FG F LG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI 263
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
S V R L+ + ++ G +HTV+ T R ++ G N QLG
Sbjct: 264 IPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWT-REAVYTMGLNG-GQLG 315
Score = 200 (75.5 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 70/234 (29%), Positives = 105/234 (44%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S ++ QV + H+ F+ Q GQV+TC
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G N Q
Sbjct: 202 GHGPGGRLGHGDEQTCLV-PRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQ 260
Query: 248 LGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG--SGSNFC 300
LG + P+ P+ I G +++ +AAG + + T V Y+ G G C
Sbjct: 261 LG---IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV-YTMGLNGGQLGC 316
Query: 301 L--GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
L +GE+ PR + K I + V+A D V + + G +Y C
Sbjct: 317 LLDPNGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQC 369
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q+ +H ++V+ + + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 160 QNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CL 218
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ + + QV+A+++H + + G V+T G N G PR ++A
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQA 278
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-----HGDTLDRPTPKSIAPL 265
LKG V AG F L R V+T G N GQLG +G+ P+ ++ L
Sbjct: 279 KYLKGRTIIGVAAG-RFHTVLWTREAVYTMGLNG-GQLGCLLDPNGEKCVT-APRQVSAL 335
Query: 266 EEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ----TFRR 320
+ +AA + VT G +Y C + L+ + ++
Sbjct: 336 HHKDIALSLVAASDGATVCVTTRGDIYLLADYQ--CKKMASKQLNLKKVLVSGGHMEYKV 393
Query: 321 KGIHVVRVSAGDEH-VVALDSSGYVYTW 347
H+ + + G + ++A+D +G V+ W
Sbjct: 394 DPEHL-KENGGQKICILAMDGAGRVFCW 420
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 247 (92.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 61/175 (34%), Positives = 85/175 (48%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
VY++G+ NF LGHG Q + P + F R +++ +V H V L G +YT G
Sbjct: 147 VYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGH 206
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LGHGDE +P + L SH Q+ A K T VL + G VY FG F LG
Sbjct: 207 GQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQLGI 266
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
+ V R +L+ V ++ G +HTV+ T ++ G N QLG+
Sbjct: 267 LPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEA-VYTMGLNG-GQLGY 319
Score = 204 (76.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 65/230 (28%), Positives = 102/230 (44%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G+++ LGHG + ++ FP ++ ++ QV + H+ F+ GQ++TC
Sbjct: 145 TEVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTC 204
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L C Q+ A + T LT G V+T G NT Q
Sbjct: 205 GHGQGGRLGHGDEQTCLV-PRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQ 263
Query: 248 LGH-GDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFG-SGSN--FCLG 302
LG + P+ + G V+ +AAG + + T V Y+ G +G + L
Sbjct: 264 LGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEAV-YTMGLNGGQLGYLLD 322
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
+ PR + K + V VSA D V + G +Y C
Sbjct: 323 PNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCVTERGDIYLLADYQC 372
Score = 178 (67.7 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 66/230 (28%), Positives = 105/230 (45%)
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPK--SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
V+T G+N + LGHG + P+ + P V + Q+ + + ++ G +Y+ G
Sbjct: 147 VYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSV-YIKQVVLCKFHSVFLSHKGQIYTCG 205
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
G LGHG++ L PR ++ +++A +H V L G VYT+G
Sbjct: 206 HGQGGRLGHGDEQTCLVPRLVEGLSSH--QCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQ 263
Query: 355 LGH-GDEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP- 410
LG + ++P + + LK + + V A + T VL +VY G G G LG+
Sbjct: 264 LGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHT-VLWTKEAVYTMGLNG-GQLGYLL 321
Query: 411 DRGVSDKVLRPRILDSLRAHH----VSQISTGLYHTVVVTDRGRLFGFGD 456
D V PR + +L HH VS +S TV VT+RG ++ D
Sbjct: 322 DPNGEKCVTAPRQVSAL--HHKDVSVSLVSASDGATVCVTERGDIYLLAD 369
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 67/269 (24%), Positives = 118/269 (43%)
Query: 98 QSVEHSSDIVETSAGNM----QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV 152
Q +H ++V+ N Q+ ++H++ +S+ +++CG G LGHG E T C+
Sbjct: 163 QQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGHGQGGRLGHGDEQT-CL 221
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ S+ Q++A+++H + + G V+T G N+ G PR V+A
Sbjct: 222 VPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQLGILPPPANCSVPRQVQA 281
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR------PTPKSIAP 264
LKG V AG F L + V+T G N GQLG+ LD P+ ++
Sbjct: 282 KNLKGRMVIGVAAG-RFHTVLWTKEAVYTMGLNG-GQLGY--LLDPNGEKCVTAPRQVSA 337
Query: 265 LEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ----TFR 319
L SV ++A + VT G +Y C + L+ + ++
Sbjct: 338 LHHKDVSVSLVSASDGATVCVTERGDIYLLADYQ--CKKIASKQLNLKKVLVNGGYLEYK 395
Query: 320 RKGIHVVRVSAGDEH-VVALDSSGYVYTW 347
H+ + + G + ++ALD +G ++ W
Sbjct: 396 VDTQHL-KENGGQKICILALDEAGRIFCW 423
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 237 (88.5 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 98/365 (26%), Positives = 155/365 (42%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFTC 187
S +++ G++ G LG G Q R+ ++ V+ H+A + SG++ C
Sbjct: 37 SLLYTWGANSYGQLGQGNAEDQAEP-RRVESGLQEEQIRAVTGGGGHSALISDSGELLVC 95
Query: 188 GDNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N G T + F+ + V +QV+ G +FT LT G V CGSN G
Sbjct: 96 GQNHKGQLGLGHTLEIMTFQTCPLPGFGRV--QQVSCGWDFTIILTGDGLVLACGSNAFG 153
Query: 247 QLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
QLG + P + E V +AAG + LA T +G VY +G+G + H +
Sbjct: 154 QLGVSAEKTHSAEPLLLKSFHE--PVTSVAAGLRHALASTASGCVYQWGTGLS---SHAK 208
Query: 306 QHDELQPRAIQTFRRK-----GI-HVV--RVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
+ QP ++ G HV +V AG H L +G ++ WG G L
Sbjct: 209 RMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLIS 268
Query: 358 GDEIDKTLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
G + LP L S L+ V + ++G V+ +G +G LG + +
Sbjct: 269 GS-LFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSME 327
Query: 416 DKVLRPRILDS---LRA-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
+ ++ S ++A +QIS G H + V GR+F +G NE G +L+
Sbjct: 328 KQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVVG-GRVFSWGWNEHGMCGDGSLQDIT 386
Query: 472 EPTEI 476
+P I
Sbjct: 387 QPQPI 391
Score = 206 (77.6 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 91/347 (26%), Positives = 143/347 (41%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+T G H+ LIS+S + CG + G LG G T + ++F P V QVS +
Sbjct: 76 VTGGGGHSALISDSGELLVCGQNHKGQLGLG-HTLEIMTFQTCPLPGFGRVQQVSCGWDF 134
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+ G V CG N+ G P L+++ P V AGL T
Sbjct: 135 TIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHE-PVTSVAAGLRHALASTAS 193
Query: 235 GHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEV---G----SVVQIAAGPSYMLAVT 285
G V+ G+ G H + +P P ++ E G + ++ AG ++ +T
Sbjct: 194 GCVYQWGT---GLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLT 250
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
NG ++ +GS + L G L P A+ + V V +G H+VA SG V+
Sbjct: 251 VNGELFLWGSNKHGQLISGSLFLPL-PVALDRSMLQDERVSDVHSGWTHLVAQTESGRVF 309
Query: 346 TWGKGYCGALG---HGDE---IDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYG 398
TWG+ G LG H E D+ L +K+ A Q+ +V G V+
Sbjct: 310 TWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVVG-GRVFS 368
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
+GW G G D + D + +P+ + +L I G H++ +
Sbjct: 369 WGWNEHGMCG--DGSLQD-ITQPQPIPALADAVALLIGCGAGHSMAL 412
Score = 196 (74.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 74/280 (26%), Positives = 125/280 (44%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASE 172
Q++ G T++++ V +CGS+ G LG E T + +F V V+A
Sbjct: 127 QVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEP--VTSVAAGL 184
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI------FRPRLVEALKGVPCKQVTAGLN 226
HA SG V+ G S +P+ P LV V ++V AG
Sbjct: 185 RHALASTASGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSA 244
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVT 285
LT+ G + GSN HGQL G +L P P ++ + + V + +G ++++A T
Sbjct: 245 HCACLTVNGELFLWGSNKHGQLISG-SLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQT 303
Query: 286 GNGVVYSFGSGSNFCLG---HGEQHDELQPRAIQT-FRRKGIH-VVRVSAGDEHVVALDS 340
+G V+++G + LG H + +++ K + ++S G EH +A+
Sbjct: 304 ESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAV-V 362
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
G V++WG G G G D T P+P+ +L +A+ +
Sbjct: 363 GGRVFSWGWNEHGMCGDGSLQDITQPQPIPALADAVALLI 402
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 241 (89.9 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 104/351 (29%), Positives = 152/351 (43%)
Query: 155 TRINFPSA-AHVVQVSASENHAAFVLQSGQVF--------TCGDNSSFCCGHRDTNRPIF 205
T + P VVQVSA A V +SG++ T G S G + +P F
Sbjct: 329 TPLRLPMLNTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPS--LPGATEQLQPQF 386
Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
R +E GV K V+ G FT LT RG + T GS ++G LGHG+ D PK + L
Sbjct: 387 VSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEAL 446
Query: 266 EEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKG 322
+G +VQ+A G S++LAV+ V+++G G N LG G E H+ Q A+
Sbjct: 447 --LGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHE-- 502
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
RV G + + L + + G C LG D I P P ++ V C
Sbjct: 503 --AQRVICGIDSSMVLTVNNQILACGSNRCNKLGL-DRISSAEEPSPEDQVEE-ATVFTC 558
Query: 382 ARK----RKTFVLVDTGSV-----------YGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
A+ ++ V D G+ Y FG G LG + + +V P ++
Sbjct: 559 AQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLG-TNSCRNSRV--PHLVVG 615
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEI 476
LRA V+ ++ G TV + G + +G R +LG D G P ++
Sbjct: 616 LRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQL 666
Score = 211 (79.3 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 83/300 (27%), Positives = 128/300 (42%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I S G++ + L + + GS G LGHG T V
Sbjct: 387 VSRFLEG-QSGVTIKHVSCGDL------FTACLTDRGIIMTFGSGSNGCLGHGNFTD--V 437
Query: 153 SFTRINFPSAAH-VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRL 209
S +I + +VQV+ +H V +VF G DN G + + P+
Sbjct: 438 SQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNS---PQQ 494
Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKS------ 261
V ++V G++ + LT+ + CGSN +LG + + P+P+
Sbjct: 495 VAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEAT 554
Query: 262 ------IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
APL + VV G ++ AVT +G Y+FGS + LG + P +
Sbjct: 555 VFTCAQSAPLNQE-PVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLV 613
Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
R + VV + GD VA+ + G V TWGKG G LG DE + +P P+ ++H
Sbjct: 614 VGLRAMKVTVV--ACGDAFTVAIGADGEVCTWGKGARGRLGRKDE-ETGMPRPVQLEETH 670
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 237 (88.5 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 83/292 (28%), Positives = 127/292 (43%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+++F+ G++ G LG G + + +F + + +++ H+A V G +F CG
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 74
Query: 189 DNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
N G T + F P ++L G +QV G +FT LT G V +CGSN+ GQ
Sbjct: 75 LNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQ 132
Query: 248 LG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFC 300
LG HG P++I L E VV IAAG + LA T +G V+ +G SG C
Sbjct: 133 LGVPHGPRRC-VIPQAIELLRE--KVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLC 189
Query: 301 LGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
G +P + V V AG +H +L +G +Y WG G L
Sbjct: 190 PGQTLPLFLTAKEPSTVTGLENS--QAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-S 246
Query: 359 DEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
LP+ + + ++ V + TG V+ +G +G LG
Sbjct: 247 QAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 224 (83.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 89/309 (28%), Positives = 144/309 (46%)
Query: 172 ENHAA-FVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
E H++ V + +F G NS GH++ + +L + K K++T G +
Sbjct: 4 EPHSSEAVPTAAALFAWGANSYGQLGLGHKED--VLSAQQLSDFCKSGCIKRITGGGGHS 61
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TP-KSIAPLEEVGSVVQIAAGPSYMLAVT 285
+T G + CG N GQLG G T + TP KS+ ++ Q+A G + + +T
Sbjct: 62 AVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGC----AIQQVACGWDFTIILT 117
Query: 286 GNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
NG V S GS S LG HG + + P+AI+ R K VV ++AG H +A +SG
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHGPRRCVI-PQAIELLREK---VVSIAAGLRHALAATASGT 173
Query: 344 VYTWGKGYCGA---LGHGDEIDKTL----PEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
V+ WG G + L G + L P ++ L++ AV V A + L D G +
Sbjct: 174 VFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGEL 233
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVSQISTGLYHTVVVTDRGRLFGF 454
Y +G G L + +L P+ +++ + ++ + +G H V T G++F +
Sbjct: 234 YVWGSNKHGQLA----SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTW 289
Query: 455 GDNERAQLG 463
G + QLG
Sbjct: 290 GRADYGQLG 298
Score = 186 (70.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 72/266 (27%), Positives = 118/266 (44%)
Query: 99 SVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI 157
S + SD ++ +IT G H+ ++++ S+F CG + G LG G T + + FT
Sbjct: 38 SAQQLSDFCKSGCIK-RITGGGGHSAVVTDEGSLFVCGLNKDGQLGLG-HTEEVLYFTPC 95
Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
+ QV+ + + ++GQV +CG NS G R P+ +E L+
Sbjct: 96 KSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLRE-K 154
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSN--THGQ-LGHGDTLD----RPTPKSIAPLEEVGS 270
+ AGL T G V G+ + G+ L G TL P ++ LE
Sbjct: 155 VVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLEN-SQ 213
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
V + AG + ++T G +Y +GS + L + L P+ I+ + + V +
Sbjct: 214 AVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWS 272
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALG 356
G H+VA +G V+TWG+ G LG
Sbjct: 273 GWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 164 (62.8 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 58/205 (28%), Positives = 86/205 (41%)
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
AV ++++G+ S LG G + D L + + F + G + R++ G H + G
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGC-IKRITGGGGHSAVVTDEG 68
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
++ G G LG G + P SL QV T +L + G V G
Sbjct: 69 SLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSN 128
Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
FG LG P G V+ P+ ++ LR VS I+ GL H + T G +F +G A
Sbjct: 129 SFGQLGVP-HGPRRCVI-PQAIELLREKVVS-IAAGLRHALAATASGTVFQWGTG-LASS 184
Query: 463 GHDTLRGCLEPTEIFIQEMEEDTGL 487
G G P + +E TGL
Sbjct: 185 GRRLCPGQTLPLFLTAKEPSTVTGL 209
Score = 126 (49.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 49/189 (25%), Positives = 80/189 (42%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APL 265
P V L+ V AG + + LT G ++ GSN HGQL P+ I A
Sbjct: 203 PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARC 261
Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH------GEQHDELQPRAIQTFR 319
+ + + +G ++++A T G V+++G LG G + ++ P +
Sbjct: 262 FQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGP 321
Query: 320 RKGIH--------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
+KG +S G EH +A+ G ++WG G G G E D P+P+
Sbjct: 322 QKGTPSCLPCLTGATEISCGSEHNLAV-IGGVCHSWGWNEHGMCGDGTEADVWAPKPVPG 380
Query: 372 LKSHLAVQV 380
L+ L + V
Sbjct: 381 LRFFLGLHV 389
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 234 (87.4 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 105/374 (28%), Positives = 159/374 (42%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + + P +VQ A H + +SGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVPIPE--DIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
+G L P KS+ P++ S VV++A+G +++ +T +G +Y+ GSG LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGRV 207
Query: 304 --------GEQHDE--LQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKG 350
G Q E L P+ + R VR G A+ S G+VY +G
Sbjct: 208 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLS 267
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
LG +P+ L+S K+ V+ + T + G Y G +G LG
Sbjct: 268 NYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLG 327
Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
+ G +K + P ++ L A VS ++ G VT GR+F +G QLG
Sbjct: 328 LGE-GAEEKSV-PTLISRLPA--VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEE 383
Query: 469 GCLEPTEIFIQEME 482
P E+ +++E
Sbjct: 384 DAWSPVEMTGKQLE 397
Score = 228 (85.3 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 108/371 (29%), Positives = 162/371 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
DIV+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DIVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + + G+VF G DN+ G + + P V+ +P
Sbjct: 120 K--VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLSMPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T GS GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
GS + G + A++ G VY FG + LG P+ + +F+
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNST 293
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 381
VR S G H V +DS G Y+ G+ G LG G+ + K++P +S L + +V C
Sbjct: 294 KSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSSV-AC 352
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFG-SLGFPDRGVSDKVLRPRILDS--LRAHHVSQISTG 438
V D G V+ +G MG LG G + P + L V +S+G
Sbjct: 353 GASVGYAVTKD-GRVFAWG-MGTNYQLG---TGQEEDAWSPVEMTGKQLENRMVLSVSSG 407
Query: 439 LYHTVV-VTDR 448
HTV+ V D+
Sbjct: 408 GQHTVLLVKDK 418
Score = 218 (81.8 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 77/260 (29%), Positives = 119/260 (45%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ P+ E +VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKP-ALVPIPE--DIVQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 349
G LG + E+ P ++ + K VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 408
G +G + + K++ P+ S V+V + +L G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMV-PVQVQLSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGR 206
Query: 409 ----FPDRGVS---DKVLRPR--ILDSL--RAH-HVSQISTGLYHTVVVTDRGRLFGFGD 456
F +RG +++L P+ +L S R H G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGL 266
Query: 457 NERAQLGHDTLRGCLEPTEI 476
+ QLG C P +
Sbjct: 267 SNYHQLGTPGTESCFVPQNL 286
Score = 138 (53.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 53/183 (28%), Positives = 81/183 (44%)
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
T G+V + G G LG GE E + A+ +V+ AG H V L SG V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVPIPED---IVQAEAGGMHTVCLSKSGQV 88
Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
Y++G GALG ++ + P VQV A T L + G V F W F
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRV--FLWGSF 146
Query: 405 ----GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
G +G + + ++ ++ S+ V ++++G H V++T G L+ G E+
Sbjct: 147 RDNNGVIGLLEP-MKKSMVPVQVQLSMP---VVKVASGNDHLVMLTADGELYTLGSGEQG 202
Query: 461 QLG 463
QLG
Sbjct: 203 QLG 205
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 238 (88.8 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 77/277 (27%), Positives = 124/277 (44%)
Query: 116 ITTGRYHTLLISNSSVF-SCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G + T +++ + + GS G LGHG T T + +VQV+ +H
Sbjct: 396 VACGDFFTACLTDRGIIMTFGSGSNGCLGHG-SLTDISQPTIVEALLGYEMVQVACGASH 454
Query: 175 AAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ ++F G D+ G R+++ P+ V G ++V G++ + LT
Sbjct: 455 VLALSTERELFAWGRGDSGRLGLGTRESHSC---PQQVPMPPGQEAQRVVCGIDSSMILT 511
Query: 233 IRGHVHTCGSNTHGQLG--HGDTLDRPTPKS------------IAPLEEVGSVVQIAAGP 278
+ G CGSN +LG H + P P APL++ ++ I G
Sbjct: 512 VPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQE-PLLSIDLGT 570
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
++ AVT +G Y+FGS + LG + P +Q +GI + V+ GD VA+
Sbjct: 571 AHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGL--EGIKMAMVACGDAFTVAI 628
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
+ VY+WGKG G LG DE D LP P+ ++H
Sbjct: 629 GAESEVYSWGKGARGRLGRRDE-DAGLPRPVQLDETH 664
Score = 204 (76.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 88/345 (25%), Positives = 143/345 (41%)
Query: 155 TRINFPSA-AHVVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRP 207
T + P VVQV+A A V +SG++ S G + +P F
Sbjct: 323 TPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS 382
Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
R +E GV K V G FT LT RG + T GS ++G LGHG D P + L
Sbjct: 383 RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL-- 440
Query: 268 VG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
+G +VQ+A G S++LA++ ++++G G + LG G + P+ + G
Sbjct: 441 LGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPM--PPGQEAQ 498
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALG--H---GDE------IDKTLPEPL---SSL 372
RV G + + L G G LG H G+E +++ L L + L
Sbjct: 499 RVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPL 558
Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
+ + + + +G Y FG G LG R S + + L+ ++ +
Sbjct: 559 DQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIK---M 615
Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEI 476
+ ++ G TV + ++ +G R +LG D G P ++
Sbjct: 616 AMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQL 660
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 236 (88.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 94/334 (28%), Positives = 144/334 (43%)
Query: 165 VVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQV+A A V +SG++ + G + +P F R +E GV
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVTI 399
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG 277
K V G FT LT RG + T GS ++G LGHG+ D P + L +G +VQ+A G
Sbjct: 400 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEAL--LGYEMVQVACG 457
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
S++LA++ +G ++++G G LG G + P+ + G RV G + +
Sbjct: 458 ASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPV--APGQEAQRVVCGIDSSMI 515
Query: 338 LDSSGYVYTWGKGYCGALG--HG--DE-------IDKTLP-EPLSSLKSHLAVQVCAR-- 383
L S G V G LG H DE +++ L PL S +C
Sbjct: 516 LTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLG 575
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
+ + +G Y FG G LG R VS R + L+ ++ + ++ G TV
Sbjct: 576 TAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIK---MVMVACGDAFTV 632
Query: 444 VVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEI 476
V G ++ +G R +LG D G P ++
Sbjct: 633 AVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQL 666
Score = 174 (66.3 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 87/350 (24%), Positives = 137/350 (39%)
Query: 103 SSDIVETSAGNMQIT-TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFP 160
++++V+ +AG Q R L++ + G +L E Q +R +
Sbjct: 337 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGT--LLPGAVELPQPQFVSRFLEGQ 394
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
S + V+ + A + G + T G S+ C GH + I +P +VEAL G Q
Sbjct: 395 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLT-DISQPTIVEALLGYEMVQ 453
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--APLEEVGSVVQIAAGP 278
V G + L+ G + G G+LG G P+ + AP +E VV G
Sbjct: 454 VACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVV---CGI 510
Query: 279 SYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQP-RAIQ---TFRRKGIH------VV 326
+ +T G V + GS + L H +E P + ++ +F G ++
Sbjct: 511 DSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLL 570
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
V G H A+ +SG YT+G G LG P + L+ V V
Sbjct: 571 CVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAF 630
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
T + G VY +G G LG D + RP LD + V+ +S
Sbjct: 631 TVAVGAEGEVYSWGKGTRGRLGRRDEDAG--LPRPVQLDETHPYMVTSVS 678
Score = 170 (64.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 57/220 (25%), Positives = 97/220 (44%)
Query: 271 VVQIAAGPSYMLAVTGNG--VVYS---FGSGSNFCLGHGEQHDELQPRAIQTFR--RKGI 323
VVQ+AAG + VT +G +++ G+G L + QP+ + F + G+
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELP--QPQFVSRFLEGQSGV 397
Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
+ V+ GD L G + T+G G G LGHG+ D + P + +L + VQV
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACG 457
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
L G ++ +G G LG G + P+ + ++ G+ ++
Sbjct: 458 ASHVLALSTDGELFAWGRGDGGRLGL---GTRESHNCPQQVPVAPGQEAQRVVCGIDSSM 514
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
++T GR+ G N +LG D L L+ + Q++EE
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLS--LDEEPVPYQQVEE 552
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 232 (86.7 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 72/252 (28%), Positives = 114/252 (45%)
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDR--PT--PKSIAP--LEEVGSVVQIAAGPSYMLAV 284
LT G ++ G N G+LG GD +R PT P++ P LE +VQ+ Y++A
Sbjct: 193 LTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVAR 252
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRR--KGIHVVRVSAGDEHVVALDS 340
T G VY +G LG ++ D L P + F ++++V GD H +AL
Sbjct: 253 TAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQ 312
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPE--PLSSLKSHLA-----VQVCARKRKTFVLVDT 393
GY+Y WGK G LG D+ D+ P P + L +++ A ++ +
Sbjct: 313 LGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQ 372
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH--HVSQISTGLYHTVVVTDRGRL 451
G +Y +G G P+ +L LR H+ ++ G HT+ T++G +
Sbjct: 373 GFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGYI 432
Query: 452 FGFGDNERAQLG 463
+ +G N QLG
Sbjct: 433 YAWGRNYYGQLG 444
Score = 202 (76.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 52/149 (34%), Positives = 74/149 (49%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----P--LEEVGSVVQ 273
QV G T LT G+++ G N++GQLG D DR P + P LE +++
Sbjct: 299 QVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIE 358
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDE--LQPRAIQTFRRKGIHVVRVSA 330
+ AG + LA T G +Y +G+ G E +H L RR+G H+V + A
Sbjct: 359 LIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIA 418
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGD 359
G +H +A GY+Y WG+ Y G LG GD
Sbjct: 419 GPDHTLARTEQGYIYAWGRNYYGQLGLGD 447
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 59/221 (26%), Positives = 97/221 (43%)
Query: 152 VSFTRINFPSAAH------VVQVSASENHAAFVLQSGQVFTCGDNSS--FCCGHR-DTNR 202
+S TR F H +VQ+ + HA + + G ++ G N S G R + ++
Sbjct: 161 ISNTRSEFIQHRHYELNVTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQ 220
Query: 203 PI-----FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
P F P L+E +G Q+ + T +GHV+ G N G+LG D DR
Sbjct: 221 PTELPQNFFPYLLE--RGDRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRL 278
Query: 258 TPKSIA----PLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
P ++ P ++Q+ G + LA+T G +Y++G S LG +Q D +P
Sbjct: 279 HPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRP 338
Query: 313 RAIQTFRRKGI-----HVVRVSAGDEHVVALDSSGYVYTWG 348
+ R G+ ++ + AG +A G++Y WG
Sbjct: 339 ALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWG 379
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 64/251 (25%), Positives = 99/251 (39%)
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
R V G+N GQL G+ + P I PL+ S + A Y++ + S
Sbjct: 86 RAGVWGWGNNYTGQLDFGNIHEMTKPARI-PLD---SFIPEMAPDDYVVQFASADFL-SG 140
Query: 294 GSGSNFCLGHGEQHDELQPRAIQT----FRRK----GIHVVRVSAGDEHVVALDSSGYVY 345
+ S G+ H+ R T + + + +V++ + H L G +Y
Sbjct: 141 KARSLVATRQGQLHEYYWERISNTRSEFIQHRHYELNVTIVQLLSDYRHAFILTEEGGIY 200
Query: 346 TWGKGYCGALGHGDEIDKT----LPE---PLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
WG G LG GD +++ LP+ P + VQ+ R G VY
Sbjct: 201 GWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYV 260
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHH----VSQISTGLYHTVVVTDRGRLF 452
+G+ G LG D D+ L P L D H + Q+ G HT+ +T G ++
Sbjct: 261 WGFNYRGRLGLDDE--QDR-LHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIY 317
Query: 453 GFGDNERAQLG 463
+G N QLG
Sbjct: 318 AWGKNSYGQLG 328
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 232 (86.7 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 72/252 (28%), Positives = 114/252 (45%)
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDR--PT--PKSIAP--LEEVGSVVQIAAGPSYMLAV 284
LT G ++ G N G+LG GD +R PT P++ P LE +VQ+ Y++A
Sbjct: 193 LTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVAR 252
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRR--KGIHVVRVSAGDEHVVALDS 340
T G VY +G LG ++ D L P + F ++++V GD H +AL
Sbjct: 253 TAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQ 312
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPE--PLSSLKSHLA-----VQVCARKRKTFVLVDT 393
GY+Y WGK G LG D+ D+ P P + L +++ A ++ +
Sbjct: 313 LGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQ 372
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH--HVSQISTGLYHTVVVTDRGRL 451
G +Y +G G P+ +L LR H+ ++ G HT+ T++G +
Sbjct: 373 GFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGYI 432
Query: 452 FGFGDNERAQLG 463
+ +G N QLG
Sbjct: 433 YAWGRNYYGQLG 444
Score = 202 (76.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 52/149 (34%), Positives = 74/149 (49%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----P--LEEVGSVVQ 273
QV G T LT G+++ G N++GQLG D DR P + P LE +++
Sbjct: 299 QVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIE 358
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDE--LQPRAIQTFRRKGIHVVRVSA 330
+ AG + LA T G +Y +G+ G E +H L RR+G H+V + A
Sbjct: 359 LIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIA 418
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGD 359
G +H +A GY+Y WG+ Y G LG GD
Sbjct: 419 GPDHTLARTEQGYIYAWGRNYYGQLGLGD 447
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 59/221 (26%), Positives = 97/221 (43%)
Query: 152 VSFTRINFPSAAH------VVQVSASENHAAFVLQSGQVFTCGDNSS--FCCGHR-DTNR 202
+S TR F H +VQ+ + HA + + G ++ G N S G R + ++
Sbjct: 161 ISNTRSEFIQHRHYELNVTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQ 220
Query: 203 PI-----FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
P F P L+E +G Q+ + T +GHV+ G N G+LG D DR
Sbjct: 221 PTELPQNFFPYLLE--RGDRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRL 278
Query: 258 TPKSIA----PLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
P ++ P ++Q+ G + LA+T G +Y++G S LG +Q D +P
Sbjct: 279 HPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRP 338
Query: 313 RAIQTFRRKGI-----HVVRVSAGDEHVVALDSSGYVYTWG 348
+ R G+ ++ + AG +A G++Y WG
Sbjct: 339 ALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWG 379
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 64/251 (25%), Positives = 99/251 (39%)
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
R V G+N GQL G+ + P I PL+ S + A Y++ + S
Sbjct: 86 RAGVWGWGNNYTGQLDFGNIHEMTKPARI-PLD---SFIPEMAPDDYVVQFASADFL-SG 140
Query: 294 GSGSNFCLGHGEQHDELQPRAIQT----FRRK----GIHVVRVSAGDEHVVALDSSGYVY 345
+ S G+ H+ R T + + + +V++ + H L G +Y
Sbjct: 141 KARSLVATRQGQLHEYYWERISNTRSEFIQHRHYELNVTIVQLLSDYRHAFILTEEGGIY 200
Query: 346 TWGKGYCGALGHGDEIDKT----LPE---PLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
WG G LG GD +++ LP+ P + VQ+ R G VY
Sbjct: 201 GWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYV 260
Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHH----VSQISTGLYHTVVVTDRGRLF 452
+G+ G LG D D+ L P L D H + Q+ G HT+ +T G ++
Sbjct: 261 WGFNYRGRLGLDDE--QDR-LHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIY 317
Query: 453 GFGDNERAQLG 463
+G N QLG
Sbjct: 318 AWGKNSYGQLG 328
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 233 (87.1 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 81/293 (27%), Positives = 127/293 (43%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG
Sbjct: 387 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHGG-LNDIS 438
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + ++F G D G R+++ P+ V
Sbjct: 439 QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSC---PQQV 495
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRP----------- 257
G ++V G++ + LT+ G CGSN +LG H + P
Sbjct: 496 PMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALN 555
Query: 258 -TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
TP APL++ ++ + G ++ AVT +G Y+FGS + LG + P +Q
Sbjct: 556 FTPLGSAPLDQE-PLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQ 614
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
+ GI + V+ GD VA+ + G VY+WGKG G LG DE D LP P+
Sbjct: 615 GLQ--GIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDE-DAALPRPV 664
Score = 222 (83.2 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 58/218 (26%), Positives = 99/218 (45%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
++ +A G + +T G++ +FGSGSN CLGHG +D QP ++ G +V+V+
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALL--GYEMVQVA 455
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
G HV+AL + ++ WG+G G LG G + P+ + A +V + +
Sbjct: 456 CGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSSVI 515
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDK-VLRPRILDSLR-----AHHVSQ-----ISTG 438
L G G F LG + ++ L ++ ++L + + Q + G
Sbjct: 516 LTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLG 575
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
H+ VT G + FG N+ QLG + R P ++
Sbjct: 576 TAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQV 613
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 85/351 (24%), Positives = 134/351 (38%)
Query: 103 SSDIVETSAGNMQIT-TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR--INF 159
++++V+ +AG Q R L++ + G G L G Q F +
Sbjct: 337 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG---GALLPGAVEQQQPQFVSRFLEG 393
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
S + V+ + A + G + T G S+ C GH N I +P +VEAL G
Sbjct: 394 QSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLN-DISQPTIVEALLGYEMV 452
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAG 277
QV G + L+ + G G+LG G P+ + P +E V+
Sbjct: 453 QVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVI-CGID 511
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGH---GEQ---HDELQPRAIQTFRRKGIH------V 325
S +L V G + + L H GE+ H +++ A+ F G +
Sbjct: 512 SSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVE-EALN-FTPLGSAPLDQEPL 569
Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
+ V G H A+ +SG YT+G G LG P + L+ V
Sbjct: 570 LSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVACGDA 629
Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
T + G VY +G G LG D + + RP LD + + V+ +S
Sbjct: 630 FTVAIGAEGEVYSWGKGARGRLGRRDEDAA--LPRPVQLDETQPYTVTSVS 678
Score = 158 (60.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 60/221 (27%), Positives = 95/221 (42%)
Query: 271 VVQIAAGPSYMLAVTGNG--VVYS---FGSGSNFCL-GHGEQHDELQPRAIQTFR--RKG 322
VVQ+AAG + VT +G +++ G+G L G EQ QP+ + F + G
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQ---QPQFVSRFLEGQSG 396
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ + V+ GD L G + T+G G G LGHG D + P + +L + VQV
Sbjct: 397 VTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVAC 456
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
L ++ +G G LG G + P+ + ++ G+ +
Sbjct: 457 GASHVLALSTERELFAWGRGDGGRLGL---GTRESHSCPQQVPMPPGQEAQRVICGIDSS 513
Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
V++T G+ G N +LG D L EP Q++EE
Sbjct: 514 VILTVPGQALACGSNRFNKLGLDHLSLGEEPA--LHQQVEE 552
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 239 (89.2 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 97/372 (26%), Positives = 163/372 (43%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H L + S+ ++++ GS+ G LG G + + + P V +A H
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT---SPVQVPGTWKTV--AAGTTH 91
Query: 175 AAFVLQSGQVFTCGDN------SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
+ + G ++ G N G TN+ F P + G V+AG T
Sbjct: 92 SLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNK--FSP--IRIGTGNDWVAVSAG-ELT 146
Query: 229 GF-LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVT 285
F L G + + G+N G+LG G T+ RP P + PL G V +AAG + LA+
Sbjct: 147 SFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSN-GRYVAVAAGGEHALALQ 205
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
+G ++++G+ LG G P ++ + +SAG+ H VAL + G ++
Sbjct: 206 ADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDW--TAISAGEMHSVALKADGSLW 263
Query: 346 TWGKGYCGALGHGDEI---DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
+WG+ G LG+G + + T P + + +A+ A T L G+V +G
Sbjct: 264 SWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAI--AAGALHTVALHRNGTVSAWGNN 321
Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
G++G D V+++ I+ + + I+ G + V G +FG+G N QL
Sbjct: 322 AQGAVG--DGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQL 379
Query: 463 GHDTLRGCLEPT 474
G+ T PT
Sbjct: 380 GNGTFGAVTAPT 391
Score = 213 (80.0 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 86/356 (24%), Positives = 142/356 (39%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H L + ++ ++++ G++L G LG G T + T + + +SA E H
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTGG-TGILPNPTPLKIGTDRDWTAISAGEMH 252
Query: 175 AAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + G +++ G N G + P V G + AG T L
Sbjct: 253 SVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGT--GSDWVAIAAGALHTVALH 310
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G V G+N G +G G +R TP I AP+ V +V IAAG +V NG V+
Sbjct: 311 RNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVA-IAAGTGVSFSVLANGTVF 369
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+G LG+G P + + V G + L S+G ++ WG
Sbjct: 370 GWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGV---EPGGAFSLGLRSNGTLWAWGGNA 426
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LG G +P P+ + V D G+++ +G G LG
Sbjct: 427 SGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRAD-GTLWAWGDNSSGQLGIGS 485
Query: 412 RGVSDKVLRPRILDSLRA-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
+ + + + A + + ++ G H++ + G L+ +GDN QLG T
Sbjct: 486 TVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGT 541
Score = 206 (77.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 83/315 (26%), Positives = 129/315 (40%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V V+A NH + G ++ G N F G I R V+ + G K V AG
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQ-F--GQLGDGTGINRTSPVQ-VPGT-WKTVAAG 88
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV---VQIAAGPSYM 281
+ + G + GSN GQLG + +P+ +G+ V ++AG
Sbjct: 89 TTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIR-IGTGNDWVAVSAGELTS 147
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+ G+G ++S+G+ LG G QP + V V+AG EH +AL +
Sbjct: 148 FGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQAD 207
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
G ++ WG G LG G P PL + A + + L GS++ +G
Sbjct: 208 GTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQ 267
Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
FG LG V P + + + V+ I+ G HTV + G + +G+N +
Sbjct: 268 NLFGELGNGVALPGANVTTPTRVGT-GSDWVA-IAAGALHTVALHRNGTVSAWGNNAQGA 325
Query: 462 LGHDTLRGCLEPTEI 476
+G T+ PT I
Sbjct: 326 VGDGTVANRSTPTLI 340
Score = 196 (74.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 93/379 (24%), Positives = 161/379 (42%)
Query: 107 VETSAGN--MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SA 162
+ GN + ++ G + L + +++S G++L G LG G ++ + P S
Sbjct: 129 IRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSN 188
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
V V+A HA + G ++ G N + G T + P ++ ++
Sbjct: 189 GRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGI-LPNPTPLKIGTDRDWTAIS 247
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSV-VQIAAGPSY 280
AG + L G + + G N G+LG+G L P P GS V IAAG +
Sbjct: 248 AGEMHSVALKADGSLWSWGQNLFGELGNGVAL--PGANVTTPTRVGTGSDWVAIAAGALH 305
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+A+ NG V ++G+ + +G G + P I ++ V ++AG ++ +
Sbjct: 306 TVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTL-VNNVAIAAGTGVSFSVLA 364
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGF 399
+G V+ WG G LG+G T P LS+ + L V+ + L G+++ +
Sbjct: 365 NGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAF--SLGLRSNGTLWAW 422
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
G G LG D + + ++ A + +TG H+V V G L+ +GDN
Sbjct: 423 GGNASGQLG--DGTTTPSAIPVPVVGG--AGNWRTTATGTAHSVAVRADGTLWAWGDNSS 478
Query: 460 AQLGHDTLRGCLEPTEIFI 478
QLG + P +I +
Sbjct: 479 GQLGIGSTVAASTPQQITV 497
Score = 196 (74.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 94/384 (24%), Positives = 159/384 (41%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L SN ++++ G + G LG G T + + A + + H+ V
Sbjct: 407 GAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVG--GAGNWRTTATGTAHSVAV 464
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRG 235
G ++ GDNSS G T ++ A G V G + L G
Sbjct: 465 RADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADG 524
Query: 236 HVHTCGSNTHGQLGHGD-TLDRPTPKSIA---PLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
+ + G NT GQLG G T +R TP I P + V +AAG + LA+ +G ++
Sbjct: 525 TLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIW 584
Query: 292 SFGSGSNFCLGH-------GEQHDELQPRAIQTFRRKGIHV--VRVSAGDEHVVALDSSG 342
++G S LG Q + A+ + + V ++AG +H ++L + G
Sbjct: 585 TWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADG 644
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
++ WG G LG+G P + + + V + A + G+++ +G
Sbjct: 645 TLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNN 704
Query: 403 GFGSLGF-PDRGVSDKVL-RPRILDS--LRAHHVSQ-----IST-GLYHTVVVTDRGRLF 452
G LG P G +D + +P + + L ++ VS ++T G H+ + G L+
Sbjct: 705 TSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLW 764
Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
+G N QLG+ T PT +
Sbjct: 765 TWGQNTSGQLGNGTTTEADIPTAL 788
Score = 179 (68.1 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 95/392 (24%), Positives = 159/392 (40%)
Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAH 164
V T + + I G HT+ + N +V + G++ G +G G + T I P + +
Sbjct: 290 VGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTP-TLIVAPVTLVN 348
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTA 223
V ++A + VL +G VF G N + G+ T + P ++ A G V
Sbjct: 349 NVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGN-GTFGAVTAPTVLSA--GASAWLGVEP 405
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
G F+ L G + G N GQLG G T P + + G+ A G ++ +A
Sbjct: 406 GGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPV--VGGAGNWRTTATGTAHSVA 463
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGDEHVVALDSS 341
V +G ++++G S+ LG G P+ I G V+ G H + L +
Sbjct: 464 VRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKAD 523
Query: 342 GYVYTWGKGYCGALGHGDEI-DKTLP-EPLSSLKSHLA---VQVCARKRKTFVLVDTGSV 396
G +++WG G LG G ++T P + ++ + V V A + L G++
Sbjct: 524 GTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTI 583
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLR--PRIL----DSLRAHHVS--QISTGLYHTVVVTDR 448
+ +G LG ++ R P L A + S I+ G H + +
Sbjct: 584 WTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQAD 643
Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
G L+ +G N QLG+ P ++ E
Sbjct: 644 GTLWAWGANSVGQLGNGVTTATFTPVQVINAE 675
Score = 129 (50.5 bits), Expect = 0.00028, P = 0.00028
Identities = 53/209 (25%), Positives = 92/209 (44%)
Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRK 321
AP +V +AAG +++L + +G +++ GS LG G + P + T++
Sbjct: 26 APAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTWKT- 84
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSHLAV 378
V+AG H + + + G ++ WG G LG ++ P+ + V
Sbjct: 85 ------VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWV 138
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR----ILDSLRAHHVSQ 434
V A + +F L G+++ +G FG LG D G + V RP+ + D L
Sbjct: 139 AVSAGELTSFGLKGDGTLWSWGNNLFGELG--D-GTT--VSRPQPVQVVADPLSNGRYVA 193
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
++ G H + + G L+ +G N QLG
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLG 222
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 239 (89.2 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 97/372 (26%), Positives = 163/372 (43%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H L + S+ ++++ GS+ G LG G + + + P V +A H
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT---SPVQVPGTWKTV--AAGTTH 91
Query: 175 AAFVLQSGQVFTCGDN------SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
+ + G ++ G N G TN+ F P + G V+AG T
Sbjct: 92 SLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNK--FSP--IRIGTGNDWVAVSAG-ELT 146
Query: 229 GF-LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVT 285
F L G + + G+N G+LG G T+ RP P + PL G V +AAG + LA+
Sbjct: 147 SFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSN-GRYVAVAAGGEHALALQ 205
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
+G ++++G+ LG G P ++ + +SAG+ H VAL + G ++
Sbjct: 206 ADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDW--TAISAGEMHSVALKADGSLW 263
Query: 346 TWGKGYCGALGHGDEI---DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
+WG+ G LG+G + + T P + + +A+ A T L G+V +G
Sbjct: 264 SWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAI--AAGALHTVALHRNGTVSAWGNN 321
Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
G++G D V+++ I+ + + I+ G + V G +FG+G N QL
Sbjct: 322 AQGAVG--DGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQL 379
Query: 463 GHDTLRGCLEPT 474
G+ T PT
Sbjct: 380 GNGTFGAVTAPT 391
Score = 213 (80.0 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 86/356 (24%), Positives = 142/356 (39%)
Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G H L + ++ ++++ G++L G LG G T + T + + +SA E H
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTGG-TGILPNPTPLKIGTDRDWTAISAGEMH 252
Query: 175 AAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + G +++ G N G + P V G + AG T L
Sbjct: 253 SVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGT--GSDWVAIAAGALHTVALH 310
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G V G+N G +G G +R TP I AP+ V +V IAAG +V NG V+
Sbjct: 311 RNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVA-IAAGTGVSFSVLANGTVF 369
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+G LG+G P + + V G + L S+G ++ WG
Sbjct: 370 GWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGV---EPGGAFSLGLRSNGTLWAWGGNA 426
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LG G +P P+ + V D G+++ +G G LG
Sbjct: 427 SGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRAD-GTLWAWGDNSSGQLGIGS 485
Query: 412 RGVSDKVLRPRILDSLRA-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
+ + + + A + + ++ G H++ + G L+ +GDN QLG T
Sbjct: 486 TVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGT 541
Score = 206 (77.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 83/315 (26%), Positives = 129/315 (40%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V V+A NH + G ++ G N F G I R V+ + G K V AG
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQ-F--GQLGDGTGINRTSPVQ-VPGT-WKTVAAG 88
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV---VQIAAGPSYM 281
+ + G + GSN GQLG + +P+ +G+ V ++AG
Sbjct: 89 TTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIR-IGTGNDWVAVSAGELTS 147
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+ G+G ++S+G+ LG G QP + V V+AG EH +AL +
Sbjct: 148 FGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQAD 207
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
G ++ WG G LG G P PL + A + + L GS++ +G
Sbjct: 208 GTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQ 267
Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
FG LG V P + + + V+ I+ G HTV + G + +G+N +
Sbjct: 268 NLFGELGNGVALPGANVTTPTRVGT-GSDWVA-IAAGALHTVALHRNGTVSAWGNNAQGA 325
Query: 462 LGHDTLRGCLEPTEI 476
+G T+ PT I
Sbjct: 326 VGDGTVANRSTPTLI 340
Score = 196 (74.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 93/379 (24%), Positives = 161/379 (42%)
Query: 107 VETSAGN--MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SA 162
+ GN + ++ G + L + +++S G++L G LG G ++ + P S
Sbjct: 129 IRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSN 188
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
V V+A HA + G ++ G N + G T + P ++ ++
Sbjct: 189 GRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGI-LPNPTPLKIGTDRDWTAIS 247
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSV-VQIAAGPSY 280
AG + L G + + G N G+LG+G L P P GS V IAAG +
Sbjct: 248 AGEMHSVALKADGSLWSWGQNLFGELGNGVAL--PGANVTTPTRVGTGSDWVAIAAGALH 305
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+A+ NG V ++G+ + +G G + P I ++ V ++AG ++ +
Sbjct: 306 TVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTL-VNNVAIAAGTGVSFSVLA 364
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGF 399
+G V+ WG G LG+G T P LS+ + L V+ + L G+++ +
Sbjct: 365 NGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAF--SLGLRSNGTLWAW 422
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
G G LG D + + ++ A + +TG H+V V G L+ +GDN
Sbjct: 423 GGNASGQLG--DGTTTPSAIPVPVVGG--AGNWRTTATGTAHSVAVRADGTLWAWGDNSS 478
Query: 460 AQLGHDTLRGCLEPTEIFI 478
QLG + P +I +
Sbjct: 479 GQLGIGSTVAASTPQQITV 497
Score = 196 (74.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 94/384 (24%), Positives = 159/384 (41%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L SN ++++ G + G LG G T + + A + + H+ V
Sbjct: 407 GAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVG--GAGNWRTTATGTAHSVAV 464
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRG 235
G ++ GDNSS G T ++ A G V G + L G
Sbjct: 465 RADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADG 524
Query: 236 HVHTCGSNTHGQLGHGD-TLDRPTPKSIA---PLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
+ + G NT GQLG G T +R TP I P + V +AAG + LA+ +G ++
Sbjct: 525 TLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIW 584
Query: 292 SFGSGSNFCLGH-------GEQHDELQPRAIQTFRRKGIHV--VRVSAGDEHVVALDSSG 342
++G S LG Q + A+ + + V ++AG +H ++L + G
Sbjct: 585 TWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADG 644
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
++ WG G LG+G P + + + V + A + G+++ +G
Sbjct: 645 TLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNN 704
Query: 403 GFGSLGF-PDRGVSDKVL-RPRILDS--LRAHHVSQ-----IST-GLYHTVVVTDRGRLF 452
G LG P G +D + +P + + L ++ VS ++T G H+ + G L+
Sbjct: 705 TSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLW 764
Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
+G N QLG+ T PT +
Sbjct: 765 TWGQNTSGQLGNGTTTEADIPTAL 788
Score = 179 (68.1 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 95/392 (24%), Positives = 159/392 (40%)
Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAH 164
V T + + I G HT+ + N +V + G++ G +G G + T I P + +
Sbjct: 290 VGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTP-TLIVAPVTLVN 348
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTA 223
V ++A + VL +G VF G N + G+ T + P ++ A G V
Sbjct: 349 NVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGN-GTFGAVTAPTVLSA--GASAWLGVEP 405
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
G F+ L G + G N GQLG G T P + + G+ A G ++ +A
Sbjct: 406 GGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPV--VGGAGNWRTTATGTAHSVA 463
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGDEHVVALDSS 341
V +G ++++G S+ LG G P+ I G V+ G H + L +
Sbjct: 464 VRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKAD 523
Query: 342 GYVYTWGKGYCGALGHGDEI-DKTLP-EPLSSLKSHLA---VQVCARKRKTFVLVDTGSV 396
G +++WG G LG G ++T P + ++ + V V A + L G++
Sbjct: 524 GTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTI 583
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLR--PRIL----DSLRAHHVS--QISTGLYHTVVVTDR 448
+ +G LG ++ R P L A + S I+ G H + +
Sbjct: 584 WTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQAD 643
Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
G L+ +G N QLG+ P ++ E
Sbjct: 644 GTLWAWGANSVGQLGNGVTTATFTPVQVINAE 675
Score = 129 (50.5 bits), Expect = 0.00028, P = 0.00028
Identities = 53/209 (25%), Positives = 92/209 (44%)
Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRK 321
AP +V +AAG +++L + +G +++ GS LG G + P + T++
Sbjct: 26 APAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTWKT- 84
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSHLAV 378
V+AG H + + + G ++ WG G LG ++ P+ + V
Sbjct: 85 ------VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWV 138
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR----ILDSLRAHHVSQ 434
V A + +F L G+++ +G FG LG D G + V RP+ + D L
Sbjct: 139 AVSAGELTSFGLKGDGTLWSWGNNLFGELG--D-GTT--VSRPQPVQVVADPLSNGRYVA 193
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
++ G H + + G L+ +G N QLG
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLG 222
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 194 (73.4 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 62/205 (30%), Positives = 93/205 (45%)
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-GIHVVRVSAGDEHVVALD-------S 340
V+YS+G+ + LG G+ +P+ ++TF +K G+ V ++ G H L
Sbjct: 228 VLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKG 287
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGF 399
+T+G G G LGH +LPEP+S L H V V T V+ G V+ +
Sbjct: 288 PSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSW 347
Query: 400 GW-MGFG---SLGFPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVVTDRG-RLF 452
G G G + F + D + PR + S R Q+S G HTV+V D G +L+
Sbjct: 348 GMERGLGLCPDVNFTEVEAGDDSV-PRKISGGSSRFRDPVQVSCGAAHTVLVVDGGYKLW 406
Query: 453 GFGDNERAQLGHDTLRGCLEPTEIF 477
+G LG + C PT +F
Sbjct: 407 SWGRGRNGVLGTGNVSDCYVPTLVF 431
Score = 156 (60.0 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 60/221 (27%), Positives = 89/221 (40%)
Query: 164 HVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK---GVPCK 219
HVV V + H +++ G+N G D RP+ VE G+
Sbjct: 208 HVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRA-RPQTVETFNQKSGLTVY 266
Query: 220 QVTAGLNFTGFLTIRGHVH-------TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
+ G + T LT R T G +GQLGH P+ ++ L E +V
Sbjct: 267 DIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLV 326
Query: 273 QIAAGPSYMLAVTGNGVVYSFGS--GSNFC----LGHGEQHDELQPRAIQTFRRKGIHVV 326
+ G + V+ G V+S+G G C E D+ PR I + V
Sbjct: 327 SVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPV 386
Query: 327 RVSAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLP 366
+VS G H V + GY +++WG+G G LG G+ D +P
Sbjct: 387 QVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVP 427
Score = 154 (59.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/93 (37%), Positives = 55/93 (59%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKG--IHVVR 327
++ +AAG ++ +A+TG+G VYS+G G LG G++ DEL P ++ + +G I +V
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVG 77
Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
V+AG H +A+ G V+ WG G LG E
Sbjct: 78 VAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGE 110
Score = 135 (52.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE----PLSSLKSHLA-VQ 379
++ ++AG+ H +AL G VY+WG+G G LG G E D+ +P P + + V
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVG 77
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
V A + + D GSV+ +G+ +G LGF + L P ++ +L S S
Sbjct: 78 VAAGAYHSLAVSDDGSVWCWGYNIYGQLGFD----GENSLAPCLIKNLFERETSSSS 130
Score = 132 (51.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 61/215 (28%), Positives = 91/215 (42%)
Query: 267 EVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT-FRRKG 322
EVGS V + AG LA+ G ++ +G N E L +I F
Sbjct: 137 EVGSDLKVCTVKAGSMMSLAIDNVGGLWMWG---NVPPQDSEPDPRLSFTSIPIPFPILD 193
Query: 323 IH---VVRVSAGDEHVVAL--------DSS---GYVYTWGKGYCGALGHGDEIDKTLPEP 368
H V++V+ GDEHVVAL D+S +Y+WG + G LG GD + P+
Sbjct: 194 FHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQT 253
Query: 369 LSSL--KSHLAV-QVCARKRKTFVLV---DTGSVYGFGW-MGFGSLGFPDRGVSDKVLRP 421
+ + KS L V + T +L +T W GFG G + P
Sbjct: 254 VETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLP 313
Query: 422 RILDSLRAH-HVSQISTGLYHTVVVTDRGRLFGFG 455
+ L H ++ + GL+HT VV+ G ++ +G
Sbjct: 314 EPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Score = 83 (34.3 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-----VVQ 167
+ + G HT+ L + V+S G + G LG G E+ + V + FP+ A +V
Sbjct: 19 ISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVL-VEFPNQAEGDRIRIVG 77
Query: 168 VSASENHAAFVLQSGQVFTCGDN 190
V+A H+ V G V+ G N
Sbjct: 78 VAAGAYHSLAVSDDGSVWCWGYN 100
Score = 44 (20.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
H V+ + G H D L+ +G+N QLG
Sbjct: 208 HVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLG 241
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 226 (84.6 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 104/375 (27%), Positives = 158/375 (42%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + ++ P VVQ A H + +SGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLE---EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
+G L P KS+ P++ +V VV++A+G +++ +T +G +Y+ G G LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLDV-PVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
Query: 304 ---------GEQHDE--LQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGK 349
G Q E L P+ + R VR G A+ G+VY +G
Sbjct: 207 VPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 266
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
LG +P+ L+S K+ V + T + G Y G +G L
Sbjct: 267 SNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G + G +K + P ++ L A VS ++ G VT GR+F +G QLG
Sbjct: 327 GLGE-GAEEKSI-PTLISRLPA--VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQD 382
Query: 468 RGCLEPTEIFIQEME 482
P E+ +++E
Sbjct: 383 EDAWSPVEMMGKQLE 397
Score = 211 (79.3 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 106/371 (28%), Positives = 159/371 (42%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + G+VF G DN+ G + + P V+ VP
Sbjct: 120 K--VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDVPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
GS + G + A++ G VY FG + LG P+ + +F+
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNST 293
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 381
V S G H V +DS G Y+ G+ G LG G+ + K++P +S L + +V C
Sbjct: 294 KSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSV-AC 352
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFG-SLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTG 438
V D G V+ +G MG LG G + P + L V +S+G
Sbjct: 353 GASVGYAVTKD-GRVFAWG-MGTNYQLG---TGQDEDAWSPVEMMGKQLENRVVLSVSSG 407
Query: 439 LYHTVV-VTDR 448
HTV+ V D+
Sbjct: 408 GQHTVLLVKDK 418
Score = 206 (77.6 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 76/260 (29%), Positives = 117/260 (45%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 349
G LG + E+ P ++ + K VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTDDGRVFLWGSFR 147
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 408
G +G + + K++ P+ V+V + +L G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMV-PVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
Query: 409 ----FPDRGVS---DKVLRPR--ILDSL--RAH-HVSQISTGLYHTVVVTDRGRLFGFGD 456
F +RG +++L P+ +L S R H G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 266
Query: 457 NERAQLGHDTLRGCLEPTEI 476
+ QLG C P +
Sbjct: 267 SNYHQLGTPGTESCFIPQNL 286
Score = 138 (53.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 57/183 (31%), Positives = 78/183 (42%)
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
T G+V + G G LG GE E + A+ + VV+ AG H V L SG V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPED---VVQAEAGGMHTVCLSKSGQV 88
Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
Y++G GALG ++ + P VQV A T L D G V F W F
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRV--FLWGSF 146
Query: 405 ----GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
G +G + V LD V ++++G H V++T G L+ G E+
Sbjct: 147 RDNNGVIGLLEPMKKSMVPVQVQLDV----PVVKVASGNDHLVMLTADGDLYTLGCGEQG 202
Query: 461 QLG 463
QLG
Sbjct: 203 QLG 205
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 230 (86.0 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 60/218 (27%), Positives = 102/218 (46%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
++ ++ G + +T G++ +FGSGSN CLGHG +D QP+ ++ G +V+VS
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALL--GYELVQVS 456
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
G HV+A+ + V++WG+G G LG + P+ +S A +V + +
Sbjct: 457 CGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMI 516
Query: 390 LVDTGSVYGFGWMGFGSLGFPD-RGVSD--------KVLRPRILDS--LRAHHVSQISTG 438
+ + G F LG G + +V +++ S L + I G
Sbjct: 517 MSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIG 576
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
H+V VT++G+ F FG N+ QLG R P ++
Sbjct: 577 TAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQV 614
Score = 213 (80.0 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 92/332 (27%), Positives = 140/332 (42%)
Query: 155 TRINFPSA-AHVVQVSASENHAAFVLQSGQVFT-----CGDNSSFCCGHRDTNRPIFRPR 208
T + P V+QVS V +SG++ T G G + +P F R
Sbjct: 331 TPLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISR 390
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
+E GV K V+ G FT LT RG + T GS ++G LGHG+ D PK + L +
Sbjct: 391 FLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEAL--L 448
Query: 269 G-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
G +VQ++ G S++LAVT V+S+G G N LG Q P+ + R
Sbjct: 449 GYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSL--PADFEAQR 506
Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---HL--AVQVCA 382
V G + + + + + G LG D++ T EP S + HL VQ
Sbjct: 507 VLCGVDCSMIMSTQHQILACGNNRFNKLGL-DKVSGT-EEPSSFCQVEEVHLFQLVQSAP 564
Query: 383 RKRKTFVLVDTGSVYG-----------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
+ V +D G+ + FG G LG R S +V P + L+
Sbjct: 565 LNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRR-SSRV--PYQVSGLQG-- 619
Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
++ + G T+ + G ++ +G R +LG
Sbjct: 620 ITMAACGDAFTLAIGAEGEVYTWGKGARGRLG 651
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 78/301 (25%), Positives = 130/301 (43%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP--ETTQ 150
+ RFL+ + I S G++ + T L + + GS G LGHG + TQ
Sbjct: 388 ISRFLEG-QSGVTIKSVSCGDL------FTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQ 440
Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPR 208
+ +VQVS +H V +VF+ G DN +D++ P+
Sbjct: 441 PKIVEAL---LGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNC---PQ 494
Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
V ++V G++ + ++ + + CG+N +LG P S +EEV
Sbjct: 495 QVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEV 554
Query: 269 G-------------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
+V I G ++ +AVT G ++FGS + LG + P
Sbjct: 555 HLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVP--- 611
Query: 316 QTFRRKGIHVVRVSA-GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
++ G+ + ++A GD +A+ + G VYTWGKG G LG +E D +P+P+ +S
Sbjct: 612 --YQVSGLQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEE-DFGIPKPVQLDES 668
Query: 375 H 375
H
Sbjct: 669 H 669
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 63/221 (28%), Positives = 105/221 (47%)
Query: 271 VVQIAAGPSYMLAVTGNG--VVY---SFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGI 323
V+Q++ G + + VT +G + + S GSG G EQ +QP+ I F + G+
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQ---MQPQFISRFLEGQSGV 398
Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
+ VS GD L G + T+G G G LGHG+ D T P+ + +L + VQV
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCG 458
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ-ISTGLYHT 442
+ + V+ +G G LG D P+ + SL A +Q + G+ +
Sbjct: 459 ASHVLAVTNEREVFSWGRGDNGRLGL---ATQDSHNCPQQV-SLPADFEAQRVLCGVDCS 514
Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
++++ + ++ G+N +LG D + G EP+ F Q +EE
Sbjct: 515 MIMSTQHQILACGNNRFNKLGLDKVSGTEEPSS-FCQ-VEE 553
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 223 (83.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 104/375 (27%), Positives = 160/375 (42%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + ++ P +VQ A H + +SGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSIPE--DIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ + +V + K QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTS--VEGSEMVPGKVDLQEKVIQVSAGDSHTAALTEDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
+G L P KS+ P++ SV V++A+G +++ +T +G +Y+ GSG LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRV 207
Query: 304 --------GEQHDE--LQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKG 350
G Q E L P+ + R VR G A+ S G+VY +G
Sbjct: 208 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLS 267
Query: 351 YCGALG-HGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
LG G E +P+ L+S K+ V + T + G Y G +G L
Sbjct: 268 NYHQLGTQGTE-SCFVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRL 326
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G + G +K + P ++ L VS ++ G VT GR+F +G QLG
Sbjct: 327 GLGE-GAEEKSV-PTLIPRLPT--VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQD 382
Query: 468 RGCLEPTEIFIQEME 482
P E+ +++E
Sbjct: 383 EDAWSPVEMTGKQLE 397
Score = 220 (82.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 105/371 (28%), Positives = 163/371 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
DIV+ AG M HT+ +S S V+S G + G LG E ++ V +++
Sbjct: 68 DIVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVDLQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
V+QVSA ++H A + + G+VF G DN+ G + + P V+ VP
Sbjct: 120 K--VIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLSVPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT+ G ++T GS GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
GS + G + A++ G VY FG + LG P+ + +F+
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNST 293
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 381
V S G H V +DS G Y+ G+ G LG G+ + K++P + L + +V C
Sbjct: 294 KSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPTVSSV-AC 352
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFG-SLGFPDRGVSDKVLRPRILDSLRAHH--VSQISTG 438
V D G V+ +G MG LG G + P + + + V +S+G
Sbjct: 353 GASVGYAVTKD-GRVFAWG-MGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSG 407
Query: 439 LYHTVV-VTDR 448
HTV+ V D+
Sbjct: 408 GQHTVLLVKDK 418
Score = 207 (77.9 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 75/260 (28%), Positives = 117/260 (45%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E++ VQ AG + + ++ +G VYSF
Sbjct: 35 GVVLTLGQGDVGQLGLGENVMERKKPALVSIPEDI---VQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 349
G LG + E+ P + + K V++VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVD-LQEK---VIQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 408
G +G + + K++ P+ S V+V + +L G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMV-PVQVQLSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGR 206
Query: 409 ----FPDRGVS---DKVLRPR--ILDSL--RAH-HVSQISTGLYHTVVVTDRGRLFGFGD 456
F +RG +++L P+ +L S R H G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGL 266
Query: 457 NERAQLGHDTLRGCLEPTEI 476
+ QLG C P +
Sbjct: 267 SNYHQLGTQGTESCFVPQNL 286
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 53/183 (28%), Positives = 82/183 (44%)
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
T GVV + G G LG GE E + A+ + +V+ AG H V L SG V
Sbjct: 32 TEPGVVLTLGQGDVGQLGLGENVMERKKPALVSIPED---IVQAEAGGMHTVCLSKSGQV 88
Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
Y++G GALG ++ + P +QV A T L + G V F W F
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVDLQEKVIQVSAGDSHTAALTEDGRV--FLWGSF 146
Query: 405 ----GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
G +G + + ++ ++ S+ V ++++G H V++T G L+ G E+
Sbjct: 147 RDNNGVIGLLEP-MKKSMVPVQVQLSVP---VVKVASGNDHLVMLTVDGDLYTLGSGEQG 202
Query: 461 QLG 463
QLG
Sbjct: 203 QLG 205
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 223 (83.6 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 78/351 (22%), Positives = 148/351 (42%)
Query: 108 ETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
++S+ + I+ G +H+ L + ++ G G LG G E + V +N H ++
Sbjct: 98 DSSSFRIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENS--VFVPNLNPLFEEHSIR 155
Query: 168 -VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
++ H+ + G VFT G GH+ R + PR V+ +
Sbjct: 156 CIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELV-PRRVDDSWDCKISAIATSGT 214
Query: 227 FTGFLTIRGHVHTCGSNT-HGQLGHGDTLDRPTPKSIAPLEEVGS----VVQIAAGPSYM 281
T +T G ++ G G+LG G ++ +V + V ++ G +
Sbjct: 215 HTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFT 274
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+A+T G ++++G+ SN+ LG G+ +P + + +G+ + +++ G H +AL
Sbjct: 275 MALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSL--EGVRITQIACGGYHSLALTEE 332
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
G V +WG G G LG ++ +P + +L V + + + + D G ++ +G
Sbjct: 333 GKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGN 392
Query: 402 MGFGSLGFPDRG-VSDKVLRPRIL---DSLRAHHVSQISTGLYHTVVVTDR 448
LG P + + L D + H V IS G H + + R
Sbjct: 393 AKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 443
Score = 198 (74.8 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 82/334 (24%), Positives = 139/334 (41%)
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
RI+ S++ + +S H+ + G ++ G G N +F P L +
Sbjct: 94 RIDADSSSFRIGISCGLFHSGLTID-GDLWIWGKGDGGRLGFGQENS-VFVPNLNPLFEE 151
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
+ + G + LT +G V T G G LGH P+ + + + IA
Sbjct: 152 HSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDC-KISAIA 210
Query: 276 AGPSYMLAVTGNGVVYSFG--SGSN-FCLGHGEQHDELQPRAIQT-FRRKGIHVVRVSAG 331
++ A+T +G +Y +G G LG G +E ++ + + + V VS G
Sbjct: 211 TSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCG 270
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
+AL G ++ WG LG GD + P P+ SL+ Q+ + L
Sbjct: 271 GFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALT 330
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
+ G V +G G G LG + KV P +++L + I++G + +TD G L
Sbjct: 331 EEGKVLSWGHGGHGQLGSSSLR-NQKV--PTEIEALADKKIVFIASGGSSSAAITDGGEL 387
Query: 452 FGFGDNERAQLGHDTLRGC-LEPTEI-FIQEMEE 483
+ +G+ + QLG L P E+ F+ E +E
Sbjct: 388 WMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDE 421
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 76/298 (25%), Positives = 129/298 (43%)
Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
C S I P A +V V+ S++H V + G + G+ + G P +
Sbjct: 440 CFSMAPIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRM 499
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
E+++ AG FT +T G + +CGSN H LG + + +PK IA L +V
Sbjct: 500 ESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADV-R 558
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVS 329
V Q+AAG ++LA++ G VY +G+ + LG G Q + P+ I K ++
Sbjct: 559 VEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVK-TKPSKIY 617
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
G + L ++G ++ G LG T + + H Q C +
Sbjct: 618 CGPDTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQL--PHKVTQACFSSTHSVF 675
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
LV+ G VY G G G + V P ++DS+++ ++ + + T+V ++
Sbjct: 676 LVEGGYVYTMGRNAEGQRGIRH---CNSVDHPTLVDSVKSRYIVKANCSDQCTIVASE 730
Score = 218 (81.8 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 74/257 (28%), Positives = 114/257 (44%)
Query: 221 VTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAA 276
V ++ + F+ + G + G THGQLG L+ + P + + VV A
Sbjct: 455 VDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGL-TALEAWKHYPSRMESVRNY-HVVSACA 512
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G + + VT G + S GS ++ LG EQ + P+ I R + V +V+AG +HV+
Sbjct: 513 GDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIA--RLADVRVEQVAAGLQHVL 570
Query: 337 ALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDT 393
AL G VY WG CGALG G+ + + P+ LS +K+ + C VL
Sbjct: 571 ALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSA-VLFAN 629
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
G ++ G + LGF R + L H V+Q H+V + + G ++
Sbjct: 630 GELHVCGSNDYNKLGF-QRSAKITAFKKVQLP----HKVTQACFSSTHSVFLVEGGYVYT 684
Query: 454 FGDNERAQLGHDTLRGC 470
G N Q G +R C
Sbjct: 685 MGRNAEGQRG---IRHC 698
Score = 196 (74.1 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 71/266 (26%), Positives = 111/266 (41%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
HVV A + V Q+G + +CG N+ G +D R P+L+ L V +QV A
Sbjct: 506 HVVSACAGDGFTILVTQAGSLLSCGSNAHLALG-QDEQRNYHSPKLIARLADVRVEQVAA 564
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
GL L+ G V+ G++T G LG G+ + P+ I +I GP
Sbjct: 565 GLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSA 624
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-H-VVRVSAGDEHVVALDS 340
+ NG ++ GS LG I F++ + H V + H V L
Sbjct: 625 VLFANGELHVCGSNDYNKLGFQRS------AKITAFKKVQLPHKVTQACFSSTHSVFLVE 678
Query: 341 SGYVYTWGKGYCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
GYVYT G+ G G H + +D P + S+KS V+ + T V + +
Sbjct: 679 GGYVYTMGRNAEGQRGIRHCNSVDH--PTLVDSVKSRYIVKANCSDQCTIVASEDNIITV 736
Query: 399 FGWM-GFGSLGFPDRGVSDKVLRPRI 423
+G G +G + G+ ++ P +
Sbjct: 737 WGTRNGLPGIGSTNCGLGLQICTPNM 762
Score = 141 (54.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCAR 383
+V V+ D H V ++ G Y WG+G G LG E K P + S++++ V CA
Sbjct: 454 IVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAG 513
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
T ++ GS+ G +LG ++ P+++ L V Q++ GL H +
Sbjct: 514 DGFTILVTQAGSLLSCGSNAHLALGQDEQR---NYHSPKLIARLADVRVEQVAAGLQHVL 570
Query: 444 VVTDRGRLFGFGDNERAQLG 463
++ G ++ +G + LG
Sbjct: 571 ALSREGAVYVWGTSTCGALG 590
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 220 (82.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 96/377 (25%), Positives = 160/377 (42%)
Query: 116 ITTGRY-HTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
I++ Y H+ + N + + G++ G LG G TT + R+ A + + +
Sbjct: 35 ISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGT-TTSAATPKRLRLGFATYSSGFATGAS 93
Query: 174 H----AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFT 228
H A F SG V G NS+ G P P + G +QV AG
Sbjct: 94 HTLAIARFDNVSG-VRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAG-GLH 150
Query: 229 GFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G V GSN+ GQL + R P+ + + + I AG S+ +A T
Sbjct: 151 SMALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTS 210
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
Y++G+ ++ LG+G P+ +Q I + ++SAG H +ALDS+G ++
Sbjct: 211 TEA-YAWGNNASGQLGNGTTLSNHMPQKVQL--PSSITIRKISAGGSHNLALDSTGAIWA 267
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGF 404
WG G LG+G +++ P L+ L + + + V A + + +VY W GF
Sbjct: 268 WGSNAYGQLGNGTTTNQSTPVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYT--W-GF 323
Query: 405 GSLGFPDRGVSDKVLRP-RILDSLRAHHVSQ---ISTGLYHTVVVTD-RGRLFGFGDNER 459
+LG G + L P ++ D+ + G + T+V + G ++ +G N
Sbjct: 324 NTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGY 383
Query: 460 AQLGHDTLRGCLEPTEI 476
QLG T P ++
Sbjct: 384 GQLGDGTTSNRTAPVQV 400
Score = 216 (81.1 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/259 (26%), Positives = 118/259 (45%)
Query: 115 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSAS 171
Q+ G H++ ++ +V++ GS+ G L P + F +A + + A
Sbjct: 143 QVAAGGLHSMALAGGTVWAWGSNSAGQLALNP-ISSATRFAPRQVETAKLPIAPTAIVAG 201
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+H+ S + + G+N+S G+ T P+ V+ + ++++AG + L
Sbjct: 202 GSHS-IAYTSTEAYAWGNNASGQLGN-GTTLSNHMPQKVQLPSSITIRKISAGGSHNLAL 259
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G + GSN +GQLG+G T ++ TP + V + + AGPS+ +AV N VY
Sbjct: 260 DSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVY 319
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEH-VVALDSSGYVYTWG 348
++G + L G D+L P ++ V V G +V + SG ++ WG
Sbjct: 320 TWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWG 379
Query: 349 -KGYCGALGHGDEIDKTLP 366
GY G LG G ++T P
Sbjct: 380 YNGY-GQLGDGTTSNRTAP 397
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 43/156 (27%), Positives = 67/156 (42%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASE 172
+I+ G H L + S ++++ GS+ G LG+G T Q ++ P+ + V A
Sbjct: 248 KISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTP-VQLTLPAGVTGFIDVFAGP 306
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H+ V + V+T G N+ T + P V VP V + F T
Sbjct: 307 SHSVAVASNFTVYTWGFNTLGLLSVGTTGDQL-SPAQVRDASNVPFTDVERVVLLGSFFT 365
Query: 233 I-----RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
I G + G N +GQLG G T +R P +A
Sbjct: 366 IVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVA 401
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 220 (82.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 96/377 (25%), Positives = 160/377 (42%)
Query: 116 ITTGRY-HTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
I++ Y H+ + N + + G++ G LG G TT + R+ A + + +
Sbjct: 35 ISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGT-TTSAATPKRLRLGFATYSSGFATGAS 93
Query: 174 H----AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFT 228
H A F SG V G NS+ G P P + G +QV AG
Sbjct: 94 HTLAIARFDNVSG-VRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAG-GLH 150
Query: 229 GFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G V GSN+ GQL + R P+ + + + I AG S+ +A T
Sbjct: 151 SMALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTS 210
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
Y++G+ ++ LG+G P+ +Q I + ++SAG H +ALDS+G ++
Sbjct: 211 TEA-YAWGNNASGQLGNGTTLSNHMPQKVQL--PSSITIRKISAGGSHNLALDSTGAIWA 267
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGF 404
WG G LG+G +++ P L+ L + + + V A + + +VY W GF
Sbjct: 268 WGSNAYGQLGNGTTTNQSTPVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYT--W-GF 323
Query: 405 GSLGFPDRGVSDKVLRP-RILDSLRAHHVSQ---ISTGLYHTVVVTD-RGRLFGFGDNER 459
+LG G + L P ++ D+ + G + T+V + G ++ +G N
Sbjct: 324 NTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGY 383
Query: 460 AQLGHDTLRGCLEPTEI 476
QLG T P ++
Sbjct: 384 GQLGDGTTSNRTAPVQV 400
Score = 216 (81.1 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 68/259 (26%), Positives = 118/259 (45%)
Query: 115 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSAS 171
Q+ G H++ ++ +V++ GS+ G L P + F +A + + A
Sbjct: 143 QVAAGGLHSMALAGGTVWAWGSNSAGQLALNP-ISSATRFAPRQVETAKLPIAPTAIVAG 201
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+H+ S + + G+N+S G+ T P+ V+ + ++++AG + L
Sbjct: 202 GSHS-IAYTSTEAYAWGNNASGQLGN-GTTLSNHMPQKVQLPSSITIRKISAGGSHNLAL 259
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G + GSN +GQLG+G T ++ TP + V + + AGPS+ +AV N VY
Sbjct: 260 DSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVY 319
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEH-VVALDSSGYVYTWG 348
++G + L G D+L P ++ V V G +V + SG ++ WG
Sbjct: 320 TWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWG 379
Query: 349 -KGYCGALGHGDEIDKTLP 366
GY G LG G ++T P
Sbjct: 380 YNGY-GQLGDGTTSNRTAP 397
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 43/156 (27%), Positives = 67/156 (42%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASE 172
+I+ G H L + S ++++ GS+ G LG+G T Q ++ P+ + V A
Sbjct: 248 KISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTP-VQLTLPAGVTGFIDVFAGP 306
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H+ V + V+T G N+ T + P V VP V + F T
Sbjct: 307 SHSVAVASNFTVYTWGFNTLGLLSVGTTGDQL-SPAQVRDASNVPFTDVERVVLLGSFFT 365
Query: 233 I-----RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
I G + G N +GQLG G T +R P +A
Sbjct: 366 IVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVA 401
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 225 (84.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 77/288 (26%), Positives = 126/288 (43%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
P+ +V+ G K AG+ +G L I G+ G L G +++P P+ +
Sbjct: 336 PMLNTEVVQVAAGRTQK---AGVTRSGRL-ILWEAPPLGAGG-GALLPG-AIEQPQPQFV 389
Query: 263 AP-LE-EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ LE + G ++ +A G + +T G++ +FGSGSN CLGHG +D QP ++
Sbjct: 390 SRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALL 449
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
G +V+V+ G HV+AL + ++ WG+G G LG G P+ + A +
Sbjct: 450 --GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQR 507
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGF----------PDRGVSDKV-LRPRILDSLR 428
V + +L G G F LG P + V + V P L
Sbjct: 508 VVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLD 567
Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
+ + G H++++T G + FG N+ QLG + R P +
Sbjct: 568 QEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRV 615
Score = 225 (84.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 92/334 (27%), Positives = 141/334 (42%)
Query: 165 VVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQV+A A V +SG++ + G + +P F R +E GV
Sbjct: 342 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQSGVTI 401
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAG 277
K V G FT LT RG + T GS ++G LGHG D P + L +G +VQ+A G
Sbjct: 402 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEAL--LGYEMVQVACG 459
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
S++LA++ ++++G G LG G + P+ + G RV G + +
Sbjct: 460 ASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPM--PPGQEAQRVVCGIDSSMI 517
Query: 338 LDSSGYVYTWGKGYCGALGH-----GDE------IDKTLP-EPLSS--LKSHLAVQVCAR 383
L G G LG G+E +++ + PL S L + V
Sbjct: 518 LTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLG 577
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
+ +L +G Y FG G LG R VS R + L ++ +S ++ G TV
Sbjct: 578 PAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIK---ISTVACGDAFTV 634
Query: 444 VVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEI 476
+ G +F +G R +LG D G P ++
Sbjct: 635 AIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQL 668
Score = 159 (61.0 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 83/350 (23%), Positives = 134/350 (38%)
Query: 103 SSDIVETSAGNMQIT-TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFP 160
++++V+ +AG Q R L++ + G +L E Q +R +
Sbjct: 339 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGG--ALLPGAIEQPQPQFVSRFLEGQ 396
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
S + V+ + A + G + T G S+ C GH N I +P +VEAL G Q
Sbjct: 397 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN-DISQPTIVEALLGYEMVQ 455
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
V G + L+ + G G+LG G P+ + P+ ++ G
Sbjct: 456 VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQ-LVPMPPGQEAQRVVCGIDS 514
Query: 281 MLAVTGNGVVYSFGSGSNFCLGH-----GEQ---HDELQPRAIQTFRRKGIH------VV 326
+ +T G + GS LG GE+ H +++ A+ TF G ++
Sbjct: 515 SMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVE-EAV-TFTPLGSAPLDQEPLL 572
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
V G H + L +SG YT+G G LG P + L+ V
Sbjct: 573 SVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVACGDAF 632
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
T + G V+ +G G LG D + RP LD + V+ +S
Sbjct: 633 TVAIGAEGEVFSWGKGARGRLGRKDEDAG--LPRPVQLDETHPYTVTSVS 680
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 224 (83.9 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 59/218 (27%), Positives = 96/218 (44%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
++ +A G + +T G++ +FGSGSN CLGHG +D QP ++ G +V+V+
Sbjct: 401 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALL--GYEMVQVA 458
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
G HV+AL + ++ WG+G G LG G + P+ +S A +V + +
Sbjct: 459 CGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDSSMI 518
Query: 390 LVDTGSVYGFGWMGFGSLGF----------PDRGVSDKV-LRPRILDSLRAHHVSQISTG 438
L G G F LG P++ V + + P + + G
Sbjct: 519 LTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLG 578
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
H+ VT G + FG N+ QLG + R P ++
Sbjct: 579 TAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQV 616
Score = 222 (83.2 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 81/299 (27%), Positives = 126/299 (42%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG
Sbjct: 390 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHG-SLNDIS 441
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + ++F G D G R+++ P+ V
Sbjct: 442 QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSC---PQQV 498
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRPTPK------- 260
G ++V G++ + LT+ G CGSN +LG D L + P P
Sbjct: 499 SMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGL-DRLSLGEEPAPNQQVEEAL 557
Query: 261 SIAPLEEVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
S PL ++ + G ++ AVT +G Y+FGS + LG + P +Q
Sbjct: 558 SFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQ 617
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
+ I + V+ GD VA+ + G VY+WGKG G LG DE D LP P+ + H
Sbjct: 618 GLQN--IKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRDE-DAGLPRPVQLDEIH 673
Score = 174 (66.3 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 87/351 (24%), Positives = 133/351 (37%)
Query: 103 SSDIVETSAGNMQIT-TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR--INF 159
++++V+ +AG Q R L++ + G G L G Q F +
Sbjct: 340 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG---GALLPGAVEQQQPQFVSRFLEG 396
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
S + V+ + A + G + T G S+ C GH N I +P +VEAL G
Sbjct: 397 QSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN-DISQPTIVEALLGYEMV 455
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAG 277
QV G + L+ + G G+LG G P+ ++ P +E VV
Sbjct: 456 QVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVV-CGID 514
Query: 278 PSYMLAVTGNGVVYS---FGS-G-SNFCLGH----GEQHDE---LQPRAIQTFRRKGIHV 325
S +L V G + F G LG +Q +E P F R+ +
Sbjct: 515 SSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPL-- 572
Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
+ V G H A+ +SG YT+G G LG P + L++ V
Sbjct: 573 LSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNIKIAMVACGDA 632
Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
T + G VY +G G LG D + RP LD + + V+ +S
Sbjct: 633 FTVAVGAEGEVYSWGKGARGRLGRRDEDAG--LPRPVQLDEIHPYTVTSVS 681
Score = 161 (61.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 60/221 (27%), Positives = 95/221 (42%)
Query: 271 VVQIAAGPSYMLAVTGNG--VVYS---FGSGSNFCL-GHGEQHDELQPRAIQTFR--RKG 322
VVQ+AAG + VT +G +++ G+G L G EQ QP+ + F + G
Sbjct: 343 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQ---QPQFVSRFLEGQSG 399
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ + V+ GD L G + T+G G G LGHG D + P + +L + VQV
Sbjct: 400 VTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVAC 459
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
L ++ +G G LG G + P+ + ++ G+ +
Sbjct: 460 GASHVLALSTERELFAWGRGDGGRLGL---GTRESHSCPQQVSMPPGQEAQRVVCGIDSS 516
Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
+++T GR G N +LG D L EP Q++EE
Sbjct: 517 MILTVPGRALACGSNRFNKLGLDRLSLGEEPAPN--QQVEE 555
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 205 (77.2 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 76/257 (29%), Positives = 116/257 (45%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 349
G LG + E+ P ++ + K VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTDDGRVFLWGSFR 147
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 408
G +G + + K++ P+ V+V + +L G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMV-PVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
Query: 409 ----FPDRGVS---DKVLRPR--ILDSL--RAH-HVSQISTGLYHTVVVTDRGRLFGFGD 456
F +RG +++L P+ +L S R H G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 266
Query: 457 NERAQLGHDTLRGCLEP 473
+ QLG C P
Sbjct: 267 SNYHQLGTPGTESCFIP 283
Score = 175 (66.7 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 75/259 (28%), Positives = 115/259 (44%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + + G V T G G + +P LV + V Q AG T L+
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVV--QAEAGGMHTVCLS 83
Query: 233 IRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G V++ G N G LG +++ P + L+E VVQ++AG S+ A+T +G V
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE--KVVQVSAGDSHTAALTDDGRV 140
Query: 291 YSFGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
+ +GS +N +G E + P +Q + VV+V++G++H+V L + G +YT
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQL----DVPVVKVASGNDHLVMLTADGDLYTL 196
Query: 348 GKGYCGALGHGDEI----------DKTLPEPLSSLKS-----HLAVQ-VCARKRKTFVLV 391
G G G LG E+ ++ L LKS H+ Q TF +
Sbjct: 197 GCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 256
Query: 392 DTGSVYGFGWMGFGSLGFP 410
G VYGFG + LG P
Sbjct: 257 HEGHVYGFGLSNYHQLGTP 275
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 54/181 (29%), Positives = 81/181 (44%)
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
T G+V + G G LG GE E + A+ + VV+ AG H V L SG V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPED---VVQAEAGGMHTVCLSKSGQV 88
Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
Y++G GALG ++ + P VQV A T L D G V F W F
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRV--FLWGSF 146
Query: 405 -GSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
+ G G+ + + + + ++ V ++++G H V++T G L+ G E+ QL
Sbjct: 147 RDNNGVI--GLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQL 204
Query: 463 G 463
G
Sbjct: 205 G 205
Score = 122 (48.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 64/220 (29%), Positives = 95/220 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + G+VF G DN+ G + + P V+ VP
Sbjct: 120 K--VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDVPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH---------G-DTLDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLG 302
GS + G + A++ G VY FG + LG
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 225 (84.3 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 65/199 (32%), Positives = 92/199 (46%)
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV-TGNGVVYSF 293
GH++ S L HG +L + ++PL+ + + P++++ T VY++
Sbjct: 97 GHINCVWS----LLKHGVSLYMQDKEGLSPLD-----LLMKDRPAHVVFKNTDPTEVYTW 147
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G +NF LGHG Q+ + P + F R ++V +V H V L G VYT G G G
Sbjct: 148 GDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTCGHGRGG 207
Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LGHGDE +P + L H QV A K T VL + G VY FG F LG
Sbjct: 208 RLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQLGIIPPP 267
Query: 414 VSDKVLRPRILDSLRAHHV 432
S V R + + H V
Sbjct: 268 SSCNVPRQLTVRMKKGHTV 286
Score = 170 (64.9 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 45/122 (36%), Positives = 61/122 (50%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+ V++ G + LGHG + ++ + S +V QV + H+ F+ Q GQV+TC
Sbjct: 142 TEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTC 201
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D + PRLVE L G C QV A + T LT G V+T G NT Q
Sbjct: 202 GHGRGGRLGHGDEQTCLV-PRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQ 260
Query: 248 LG 249
LG
Sbjct: 261 LG 262
Score = 162 (62.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 48/147 (32%), Positives = 70/147 (47%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGFLTIRGHVHTC 240
+V+T GDN++F GH N P L++ V KQV + FL+ +G V+TC
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSK-HHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTC 201
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
G G+LGHGD P+ + L S Q+AA + + +T +G VY+FG +
Sbjct: 202 GHGRGGRLGHGDEQTCLVPRLVEGLSG-HSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQ 260
Query: 301 LGHGEQHDELQ-PRAIQTFRRKGIHVV 326
LG PR + +KG H V
Sbjct: 261 LGIIPPPSSCNVPRQLTVRMKKG-HTV 286
Score = 157 (60.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 49/133 (36%), Positives = 64/133 (48%)
Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSL-KSHLAV-QVCARKRKTFVL 390
HVV ++ VYTWG LGHG + K PE L +S + V QV K + L
Sbjct: 133 HVVFKNTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFL 192
Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
G VY G G LG D L PR+++ L H SQ++ HTVV+T+ G
Sbjct: 193 SQQGQVYTCGHGRGGRLGHGDE---QTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTEDGC 249
Query: 451 LFGFGDNERAQLG 463
++ FG N QLG
Sbjct: 250 VYTFGLNTFHQLG 262
Score = 38 (18.4 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 335 VVALDSSGYVYTW 347
++A+D +G V+ W
Sbjct: 408 ILAMDGAGRVFCW 420
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 216 (81.1 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 96/365 (26%), Positives = 160/365 (43%)
Query: 106 IVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAA 163
+V G +Q G HT+ +S++ +V++ G + G LG +T++ S T
Sbjct: 62 LVTLPEGIVQAVAGGMHTVCLSDTGNVYTFGCNDEGALGR--DTSEEGSETVPAKVDLGE 119
Query: 164 HVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
++QVSA ++H+A + + G V+ G DN+ G + + P V K P +
Sbjct: 120 KIIQVSAGDSHSAALTEDGGVYVWGSFRDNNGVI-GLLEPMKKCTVPVKVPIDK--PVVK 176
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEV--------GS 270
+ +G + LT G ++T G GQLG +R K + L E G
Sbjct: 177 IVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGK 236
Query: 271 VV--QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
VV + G + AV+ G VY FG + LG + P + +F+ V
Sbjct: 237 VVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGF 296
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKT 387
S G H + L+S G Y+ G+ G LG G ++ +K+ P + + S + V C +
Sbjct: 297 SGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGI-SDVQVVACGAS-VS 354
Query: 388 FVLVDTGSVYGFGWMGFG-SLGFPDRGVSDKVLRPRILDSLRAHH--VSQISTGLYHTVV 444
+ + GSV+ +G MG LG G + P + + + V +S+G HTV+
Sbjct: 355 YAVTKQGSVFSWG-MGTNLQLG---TGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVL 410
Query: 445 -VTDR 448
V D+
Sbjct: 411 LVKDK 415
Score = 213 (80.0 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 75/259 (28%), Positives = 117/259 (45%)
Query: 234 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
+G V G GQLG G D ++R P ++ L E +VQ AG + + ++ G VY+
Sbjct: 34 KGLVLVLGQGDVGQLGLGEDVMERKKP-ALVTLPE--GIVQAVAGGMHTVCLSDTGNVYT 90
Query: 293 FGSGSNFCLGH--GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG-- 348
FG LG E+ E P + G +++VSAGD H AL G VY WG
Sbjct: 91 FGCNDEGALGRDTSEEGSETVPAKVDL----GEKIIQVSAGDSHSAALTEDGGVYVWGSF 146
Query: 349 KGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
+ G +G + + K T+P + K V++ + +L G +Y G G L
Sbjct: 147 RDNNGVIGLLEPMKKCTVPVKVPIDKP--VVKIVSGNDHLVMLTAHGELYTSGCGEQGQL 204
Query: 408 G-----FPDRGVSD---KVLRPR-ILDSLRAHHV-SQISTGLYHTVVVTDRGRLFGFGDN 457
G F +RG ++L P+ ++ R V + + G Y T V+ G ++GFG +
Sbjct: 205 GRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLS 264
Query: 458 ERAQLGHDTLRGCLEPTEI 476
QLG + C P ++
Sbjct: 265 NYHQLGTQSTNTCFVPVKL 283
Score = 200 (75.5 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 89/367 (24%), Positives = 147/367 (40%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V G G LG G + + + P +VQ A H + +G V+T G N
Sbjct: 37 VLVLGQGDVGQLGLGEDVMERKKPALVTLPEG--IVQAVAGGMHTVCLSDTGNVYTFGCN 94
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHGQL 248
G RDT+ + G QV+AG + + LT G V+ GS + +G +
Sbjct: 95 DEGALG-RDTSEEGSETVPAKVDLGEKIIQVSAGDSHSAALTEDGGVYVWGSFRDNNGVI 153
Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
G + + + T P+++ VV+I +G +++ +T +G +Y+ G G LG +H
Sbjct: 154 GLLEPMKKCTVPVKVPIDK--PVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHF 211
Query: 309 E-----------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
L+P+ + R + V G A+ G+VY +G LG
Sbjct: 212 ANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGT 271
Query: 358 GDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
+P LSS K+ V + T L G Y G +G LG + V
Sbjct: 272 QSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGL-GKDVG 330
Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
+K P ++ + V ++ G + VT +G +F +G QLG P E
Sbjct: 331 EKS-EPTVVPGIS--DVQVVACGASVSYAVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVE 387
Query: 476 IFIQEME 482
+ +++E
Sbjct: 388 MTGKQLE 394
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 88/322 (27%), Positives = 140/322 (43%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
PS + V + +H + + G V G G + +P LV +G+
Sbjct: 14 PSDSTVAK-KLKVSHISHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEGIV-- 70
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
Q AG T L+ G+V+T G N G LG DT + + A ++ ++Q++AG S
Sbjct: 71 QAVAGGMHTVCLSDTGNVYTFGCNDEGALGR-DTSEEGSETVPAKVDLGEKIIQVSAGDS 129
Query: 280 YMLAVTGNGVVYSFGS--GSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVV 336
+ A+T +G VY +GS +N +G E + P + + VV++ +G++H+V
Sbjct: 130 HSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCTVPVKVPIDKP----VVKIVSGNDHLV 185
Query: 337 ALDSSGYVYTWGKGYCGALG----H-----GDEIDKTLPEP-LSSLKSHLAV---QVCAR 383
L + G +YT G G G LG H G + L EP + +K V V
Sbjct: 186 MLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCG 245
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYH 441
TF + G VYGFG + LG ++ P L S + S + S G +H
Sbjct: 246 AYFTFAVSKEGHVYGFGLSNYHQLGTQS---TNTCFVPVKLSSFKNSTTSWVGFSGGQHH 302
Query: 442 TVVVTDRGRLFGFGDNERAQLG 463
T+ + G+ + G E +LG
Sbjct: 303 TLCLNSEGKAYSLGRAEYGRLG 324
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 214 (80.4 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 91/319 (28%), Positives = 141/319 (44%)
Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
S +H + + G V T G G + +P LV + V Q AG T
Sbjct: 39 SCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVV--QAEAGGMHT 96
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
L+ G V++ G N G LG +++ P + L+E VVQ++AG S+ A+T
Sbjct: 97 VCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE--KVVQVSAGDSHTAALTD 153
Query: 287 NGVVYSFGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+G V+ +GS +N +G E + P +Q + VV+V++G++H+V L + G
Sbjct: 154 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL----DVPVVKVASGNDHLVMLTADGD 209
Query: 344 VYTWGKGYCGALGHGDEI----------DKTLPEPLSSLKS-----HLAVQ--VCARKRK 386
+YT G G G LG E+ ++ L LKS H+ Q C
Sbjct: 210 LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYF- 268
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYHTVV 444
TF + G VYGFG + LG P ++ P+ L S + S + S G +HTV
Sbjct: 269 TFAISHEGHVYGFGLSNYHQLGTPG---TESCFIPQNLTSFKNSTKSWVGFSGGQHHTVC 325
Query: 445 VTDRGRLFGFGDNERAQLG 463
+ G+ + G E +LG
Sbjct: 326 MDSEGKAYSLGRAEYGRLG 344
Score = 206 (77.6 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 76/260 (29%), Positives = 117/260 (45%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 52 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 108
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 349
G LG + E+ P ++ + K VV+VSAGD H AL G V+ WG +
Sbjct: 109 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTDDGRVFLWGSFR 164
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 408
G +G + + K++ P+ V+V + +L G +Y G G LG
Sbjct: 165 DNNGVIGLLEPMKKSMV-PVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 223
Query: 409 ----FPDRGVS---DKVLRPR--ILDSL--RAH-HVSQISTGLYHTVVVTDRGRLFGFGD 456
F +RG +++L P+ +L S R H G Y T ++ G ++GFG
Sbjct: 224 VPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 283
Query: 457 NERAQLGHDTLRGCLEPTEI 476
+ QLG C P +
Sbjct: 284 SNYHQLGTPGTESCFIPQNL 303
Score = 194 (73.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 84/291 (28%), Positives = 127/291 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 85 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 136
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + G+VF G DN+ G + + P V+ VP
Sbjct: 137 K--VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDVPV 191
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R PK + L+
Sbjct: 192 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 250
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
GS + G + A++ G VY FG + LG P+ + +F+
Sbjct: 251 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNST 310
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSL 372
V S G H V +DS G Y+ G+ G LG G+ + K++P +S L
Sbjct: 311 KSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL 361
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 194 (73.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 66/224 (29%), Positives = 106/224 (47%)
Query: 257 PT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS--GSNFCLGHGEQHD-ELQ 311
PT P S P V +V++AAG S A+T G VY +G+ ++ LG + +
Sbjct: 219 PTAIPSSAFPHGTV--IVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTT 276
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG----DEIDKTLPE 367
P+ + + K H+V GD HV+AL+ G V +WG G LG ++++ P
Sbjct: 277 PKLLPDLK-KIKHLV---CGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPR 332
Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR-GVSDK-VLRPRILD 425
K V + A +F + +G V+ +G FG G + G S+ ++ P ++D
Sbjct: 333 EFGLPKG--IVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVD 390
Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFG--DNERAQLGHDTL 467
SL +V+QI G +H++ T G +G D + L DTL
Sbjct: 391 SLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTL 434
Score = 175 (66.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 77/273 (28%), Positives = 116/273 (42%)
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHGQLGH-GDTLDRPTPKSIAPLEEVGSV 271
G +V AG + + LT G V+ G+ + G LG T + TPK + L+++ +
Sbjct: 230 GTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKIKHL 289
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQH--DELQPRAIQTFRRKGIHVVR 327
V G +++LA+ G V S+GSG LG E++ + LQPR KGI V
Sbjct: 290 V---CGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGL--PKGI--VH 342
Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALG----HGD-EIDKTLPEPLSSLKSHLAVQVCA 382
+ AG H A+ SG V+ WG G G GD E P + SL Q+C
Sbjct: 343 IGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICG 402
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGF-----PDRGV-SDKVLRPRIL---DSLRAHHVS 433
+ G +G + G PD V D+ RPRIL ++
Sbjct: 403 GAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGIKAK 462
Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
++ G H++ + GR + +G + Q G T
Sbjct: 463 AVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGT 495
Score = 138 (53.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 58/221 (26%), Positives = 96/221 (43%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGV 216
FP +V+V+A ++ + + GQV+ G ++ G + P+L+ LK +
Sbjct: 227 FPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKI 286
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQ 273
K + G N L +G V + GS QLG ++R + P E G +V
Sbjct: 287 --KHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRR-IIERNKLNGLQP-REFGLPKGIVH 342
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-----LQPRAIQTFRRKGIHVVRV 328
I AG + AV +G V+++G S G E + + P + + +K +V ++
Sbjct: 343 IGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKK--NVTQI 400
Query: 329 SAGDEHVVALDSSGYVYTWGK--GYCGALGHGDEIDKTLPE 367
G H +A G WG+ GY L +ID TLP+
Sbjct: 401 CGGAHHSIAATQDGECLVWGRLDGYQTGL----KID-TLPD 436
Score = 127 (49.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 70/281 (24%), Positives = 107/281 (38%)
Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGS--SLCGVLGHGPETTQCVSFTRINF 159
H + IVE +AG+ L V+ G+ S G+LG +T V T
Sbjct: 229 HGTVIVEVAAGDSSSFA------LTDEGQVYGWGTFRSNDGILGFDAKTK--VQTTPKLL 280
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF---RPRLVEALKGV 216
P + + +NH + G V + G G R R +PR KG+
Sbjct: 281 PDLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGI 340
Query: 217 PCKQVTAGLNFTGFLTIR-GHVHTCGSNTHGQLG----HGDTLDRPTPKSIAPLEEVGSV 271
+ AG F F + G V G N+ G+ G GD+ ++ +V
Sbjct: 341 V--HIGAGA-FHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNV 397
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG--------HGEQHDEL-QPRA-IQTFRRK 321
QI G + +A T +G +G + G DE +PR I+
Sbjct: 398 TQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVP 457
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
GI V+AG +H +A+D+SG ++WG G G + D
Sbjct: 458 GIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDD 498
Score = 68 (29.0 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 24/75 (32%), Positives = 31/75 (41%)
Query: 130 SVFSCGSSLCGVLGHGP-ETTQCVSFTRIN---FPSAAHVVQVSASENHAAFVLQSGQVF 185
+V+ CG G LG G + V R+N P VVQV+ H + +V
Sbjct: 111 NVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVL 170
Query: 186 TCGDNSSFCCGHRDT 200
T G N G RDT
Sbjct: 171 TWGVNDQGALG-RDT 184
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 213 (80.0 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 102/374 (27%), Positives = 158/374 (42%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + + P VVQ A H + QSGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALV--PLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLE-EVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
+G L P KS+ P++ ++ + VV++A+G +++ +T +G +Y+ G G LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRV 207
Query: 304 --------GEQHDE--LQPRAIQTFRR--KG-IHVVRVSAGDEHVVALDSSGYVYTWGKG 350
G Q E L PR + R +G + G A+ G+VY +G
Sbjct: 208 PELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLS 267
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
LG +P+ L+S K+ V + T + G Y G +G LG
Sbjct: 268 NYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLG 327
Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
+ G +K + P ++ L VS ++ G V+ GR+F +G QLG
Sbjct: 328 LGE-GAEEKSI-PTLISRLPV--VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQED 383
Query: 469 GCLEPTEIFIQEME 482
P E+ +++E
Sbjct: 384 DAWSPVEMTGKQLE 397
Score = 210 (79.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 78/260 (30%), Positives = 119/260 (45%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G++ L+R P ++ PL + VVQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKP-ALVPLLQ--DVVQAEAGGMHTVCLSQSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 349
G LG + E+ P ++ + K VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 408
G +G + + K++ L + + V+V + +L G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMVPVQVQLDTQV-VKVASGNDHLVMLTTDGDLYTLGCGEQGQLGR 206
Query: 409 ----FPDRGVS---DKVLRPR--ILDS--LRAH-HVSQISTGLYHTVVVTDRGRLFGFGD 456
F +RG +++L PR +L S R G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGL 266
Query: 457 NERAQLGHDTLRGCLEPTEI 476
+ QLG C P +
Sbjct: 267 SNYHQLGTPGTGSCFIPQNL 286
Score = 196 (74.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 103/371 (27%), Positives = 158/371 (42%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + + G+VF G DN+ G + + P V+
Sbjct: 120 K--VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDTQV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R P+ + L+
Sbjct: 175 VKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVL-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
G+ ++ G + A++ G VY FG + LG P+ + +F+
Sbjct: 234 RGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNST 293
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 381
V S G H V +DS G Y+ G+ G LG G+ + K++P +S L +V C
Sbjct: 294 KSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV-AC 352
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFG-SLGFPDRGVSDKVLRPRILDS--LRAHHVSQISTG 438
V D G V+ +G MG LG G D P + L V +S+G
Sbjct: 353 GASVGYAVSKD-GRVFAWG-MGTNYQLG---TGQEDDAWSPVEMTGKQLENREVLTVSSG 407
Query: 439 LYHTVV-VTDR 448
HTV+ V D+
Sbjct: 408 GQHTVLLVKDK 418
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 211 (79.3 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 102/374 (27%), Positives = 156/374 (41%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + + P VVQ A H + QSGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALV--PLLQDVVQAEAGGMHTVCLNQSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLE-EVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
+G L P KS+ P++ ++ VV++A+G +++ +T +G +Y+ G G LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRV 207
Query: 304 --------GEQHDE--LQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKG 350
G Q E L P+ + R VR G A+ G+VY +G
Sbjct: 208 PELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLS 267
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
LG +P+ L+S K+ V + T + G Y G +G LG
Sbjct: 268 NYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLG 327
Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
+ G +K + P ++ L VS ++ G V+ GR+F +G QLG
Sbjct: 328 LGE-GAEEKSI-PTLISRLPV--VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDE 383
Query: 469 GCLEPTEIFIQEME 482
P E+ +++E
Sbjct: 384 DAWSPVEMTGKQLE 397
Score = 204 (76.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 76/260 (29%), Positives = 117/260 (45%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G++ L+R P ++ PL + VVQ AG + + + +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKP-ALVPLLQ--DVVQAEAGGMHTVCLNQSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 349
G LG + E+ P ++ + K VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 408
G +G + + K++ P+ V+V + +L G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMV-PVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGR 206
Query: 409 ----FPDRGVS---DKVLRPR--ILDSLRAH---HVSQISTGLYHTVVVTDRGRLFGFGD 456
F +RG +++L P+ +L S + G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGL 266
Query: 457 NERAQLGHDTLRGCLEPTEI 476
+ QLG C P +
Sbjct: 267 SNYHQLGTPGTASCFIPQNL 286
Score = 196 (74.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 102/371 (27%), Positives = 160/371 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ ++ S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + + G+VF G DN+ G + + P V+ +P
Sbjct: 120 K--VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDMPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--------GDT--LDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVL-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
GS ++ G A++ G VY FG + LG P+ + +F+
Sbjct: 234 RGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNST 293
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 381
V S G H + +DS G Y+ G+ G LG G+ + K++P +S L +V C
Sbjct: 294 KSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV-AC 352
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFG-SLGFPDRGVSDKVLRPRILDSLRAHH--VSQISTG 438
V D G V+ +G MG LG G + P + + + V +S+G
Sbjct: 353 GASVGYAVSKD-GRVFAWG-MGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSG 407
Query: 439 LYHTVV-VTDR 448
HTV+ V D+
Sbjct: 408 GQHTVLLVKDK 418
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 210 (79.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 101/374 (27%), Positives = 157/374 (41%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + + P VVQ A H + QSGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALV--PLLQDVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 191 SSFCCGHRDTN--RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NTHG 246
G RDT+ P VE + V QV+AG + T LT G V GS + +G
Sbjct: 95 DEGALG-RDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFLWGSFRDNNG 151
Query: 247 QLGHGDTLDRPTPKSIAPLE-EVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
+G L P KS+ P++ ++ + VV++A+G +++ +T +G +Y+ G G LG
Sbjct: 152 VIG----LLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRV 207
Query: 304 --------GEQH--DELQPRAIQTFRR--KG-IHVVRVSAGDEHVVALDSSGYVYTWGKG 350
G Q L PR + R +G + G A+ G+VY +G
Sbjct: 208 PELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLS 267
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
LG +P+ L+S K+ V + T + G Y G +G LG
Sbjct: 268 NYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLG 327
Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
+ G +K + P ++ L VS ++ G V+ GR+F +G QLG
Sbjct: 328 LGE-GAEEKSI-PTLISRLPV--VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDE 383
Query: 469 GCLEPTEIFIQEME 482
P E+ +++E
Sbjct: 384 DAWSPVEMTGKQLE 397
Score = 209 (78.6 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 78/260 (30%), Positives = 118/260 (45%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G++ L+R P ++ PL + VVQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKP-ALVPLLQ--DVVQAEAGGMHTVCLSQSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 349
G LG + E+ P ++ + K VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 408
G +G + + K++ P+ V+V + +L + G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMV-PVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGR 206
Query: 409 ----FPDRGVSD---KVLRPR--ILDS--LRAH-HVSQISTGLYHTVVVTDRGRLFGFGD 456
F +RG ++L PR +L S R G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGL 266
Query: 457 NERAQLGHDTLRGCLEPTEI 476
+ QLG C P +
Sbjct: 267 SNYHQLGTPGTGSCFIPQNL 286
Score = 193 (73.0 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 101/372 (27%), Positives = 160/372 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + + G+VF G DN+ G + + P V+ P
Sbjct: 120 K--VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDAPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIA----P----LEEV 268
+V +G + LT G ++T G GQLG L +R + + P L+
Sbjct: 175 VKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSR 234
Query: 269 GSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
G+ ++ G + A++ G VY FG + LG P+ + +F+
Sbjct: 235 GTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTK 294
Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCA 382
V S G H V +DS G Y+ G+ G LG G+ + K++P +S L +V C
Sbjct: 295 SWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSV-ACG 353
Query: 383 RKRKTFVLVDTGSVYGFGWMGFG-SLGFPDRGVSDKVLRPRILDSLRAHH--VSQISTGL 439
V D G V+ +G MG LG G + P + + + V +S+G
Sbjct: 354 ASVGYAVSKD-GRVFAWG-MGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGG 408
Query: 440 YHTVV-VTDRGR 450
HTV+ V D+ +
Sbjct: 409 QHTVLLVKDQAQ 420
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 209 (78.6 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 77/268 (28%), Positives = 120/268 (44%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + ++N VVQV
Sbjct: 178 LQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQVV 237
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH D T+ P +L L GV QV +
Sbjct: 238 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPT---KLGGDLAGVNVVQVATYGD 294
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
++ G + G++ + QL D+ P+ + P VG V Q A G + +
Sbjct: 295 CCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCL-PFSGVGKVKQAACGGTGCAVLN 353
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQ------TFRRKGIHVVRVSAGDEHVVAL 338
G G V+ +G G LG G E P I T G+HV + G H AL
Sbjct: 354 GEGHVFVWGYG---ILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAAL 410
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
S G ++ WGK G LG G D+ P
Sbjct: 411 TSKGELFVWGKNIRGCLGIGRLEDQYFP 438
Score = 182 (69.1 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 64/215 (29%), Positives = 96/215 (44%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPC 218
P V+QVS H+ + VF+ G+N+ CG I+ V ++
Sbjct: 172 PQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDG 231
Query: 219 K--QVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ QV G + + FLT +G V++CG GQ LGH D PT K L V +VVQ+
Sbjct: 232 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPT-KLGGDLAGV-NVVQV 289
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDE 333
A LAV+ G ++ +G+ L ++ PR + F G V + + G
Sbjct: 290 ATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVG-KVKQAACGGT 347
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPE 367
L+ G+V+ WG Y G LG G + +T PE
Sbjct: 348 GCAVLNGEGHVFVWG--Y-GILGKGPNLVETAFPE 379
Score = 169 (64.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 74/273 (27%), Positives = 115/273 (42%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS- 261
P+ RP+ L QV+ G + LT V + G+N +GQ G + +S
Sbjct: 168 PLDRPQETRVL------QVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESH 221
Query: 262 -IAPLEEV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ +++ G VVQ+ G + L +T G VYS G G++ G G P +
Sbjct: 222 KVNRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKLGG-D 280
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKTLPE--PLSSLKSHL 376
G++VV+V+ + +A+ + G ++ WG Y D +P P S + +
Sbjct: 281 LAGVNVVQVATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGV-GKV 339
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD---KVLRPRILDSLRAH--- 430
C T V G + F W G+G LG V +V+ P + +
Sbjct: 340 KQAACGG---TGCAVLNGEGHVFVW-GYGILGKGPNLVETAFPEVIPPTLFGLTEFNPGV 395
Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
HVS I GL H +T +G LF +G N R LG
Sbjct: 396 HVSHIWCGLSHFAALTSKGELFVWGKNIRGCLG 428
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 210 (79.0 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 77/294 (26%), Positives = 125/294 (42%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG
Sbjct: 372 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHG-SLNDIS 423
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + ++F G D G R+++ P+LV
Sbjct: 424 QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH---CCPQLV 480
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEE 267
G ++V G++ + LT+ G CGSN +LG D L + P P +EE
Sbjct: 481 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DPLSLGEEPAPHQ--QVEE 537
Query: 268 VGSVVQIAAGP---SYMLAV---TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ + + P +L+V T + + SG + G + P +Q +
Sbjct: 538 AVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQ-- 595
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
GI + V+ GD VA+ + G V++WGKG G LG DE D LP P+ ++H
Sbjct: 596 GIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDE-DAGLPRPVQLDETH 648
Score = 202 (76.2 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 76/295 (25%), Positives = 119/295 (40%)
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ-VTAGLNFTGFLTIRGHVHT 239
+G G S R P+ +V+ G K VT L +
Sbjct: 292 AGPPLVPGSTGSRTSSARCRGLPMLNTEVVQVAAGRTQKAGVTRCLPLPAPSPVPSQAPP 351
Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAP-LE-EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSG 296
G+ G L G +++P P+ ++ LE + G ++ +A G + +T G++ +FGSG
Sbjct: 352 LGAGG-GALLPG-AIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSG 409
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
SN CLGHG +D QP ++ G +V+V+ G HV+AL + ++ WG+G G LG
Sbjct: 410 SNGCLGHGSLNDISQPTIVEALL--GYEMVQVACGASHVLALSTERELFAWGRGDGGRLG 467
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF------- 409
G P+ + A +V + +L G G F LG
Sbjct: 468 LGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGE 527
Query: 410 ---PDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNER 459
P + V + V P L + + G H+ VT G + FG N R
Sbjct: 528 EPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR 582
Score = 184 (69.8 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 71/281 (25%), Positives = 115/281 (40%)
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
+P F R +E GV K V G FT LT RG + T GS ++G LGHG D P
Sbjct: 368 QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTI 427
Query: 262 IAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
+ L +G +VQ+A G S++LA++ ++++G G LG G + P+ +
Sbjct: 428 VEAL--LGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPM--P 483
Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
G RV G + + L G G LG P P ++ +
Sbjct: 484 PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTP 543
Query: 381 CARK---RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQIS 436
++ + VD G+ + + + +V R P + L+ +S ++
Sbjct: 544 LGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGIKISTVA 603
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEI 476
G TV + G +F +G R +LG D G P ++
Sbjct: 604 CGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQL 644
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 210 (79.0 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 77/294 (26%), Positives = 125/294 (42%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
V RFL+ + I + G++ + L + + GS G LGHG
Sbjct: 376 VSRFLEG-QSGVTIKHVACGDL------FTACLTDRGIIMTFGSGSNGCLGHG-SLNDIS 427
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLV 210
T + +VQV+ +H + ++F G D G R+++ P+LV
Sbjct: 428 QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH---CCPQLV 484
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEE 267
G ++V G++ + LT+ G CGSN +LG D L + P P +EE
Sbjct: 485 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DPLSLGEEPAPHQ--QVEE 541
Query: 268 VGSVVQIAAGP---SYMLAV---TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ + + P +L+V T + + SG + G + P +Q +
Sbjct: 542 AVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQ-- 599
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
GI + V+ GD VA+ + G V++WGKG G LG DE D LP P+ ++H
Sbjct: 600 GIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDE-DAGLPRPVQLDETH 652
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 75/286 (26%), Positives = 120/286 (41%)
Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ-VTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
+S+ C G + P+ +V+ G K VT L + G+ G L
Sbjct: 305 SSARCRGKSEGXLPMLNTEVVQVAAGRTQKAGVTRCLPLPAPSPVPSQAPPLGAGG-GAL 363
Query: 249 GHGDTLDRPTPKSIAP-LE-EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
G +++P P+ ++ LE + G ++ +A G + +T G++ +FGSGSN CLGHG
Sbjct: 364 LPG-AIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS 422
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
+D QP ++ G +V+V+ G HV+AL + ++ WG+G G LG G
Sbjct: 423 LNDISQPTIVEALL--GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCC 480
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF----------PDRGVS 415
P+ + A +V + +L G G F LG P + V
Sbjct: 481 PQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVE 540
Query: 416 DKV-LRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNER 459
+ V P L + + G H+ VT G + FG N R
Sbjct: 541 EAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR 586
Score = 184 (69.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 71/281 (25%), Positives = 115/281 (40%)
Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
+P F R +E GV K V G FT LT RG + T GS ++G LGHG D P
Sbjct: 372 QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTI 431
Query: 262 IAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
+ L +G +VQ+A G S++LA++ ++++G G LG G + P+ +
Sbjct: 432 VEAL--LGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPM--P 487
Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
G RV G + + L G G LG P P ++ +
Sbjct: 488 PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTP 547
Query: 381 CARK---RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQIS 436
++ + VD G+ + + + +V R P + L+ +S ++
Sbjct: 548 LGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGIKISTVA 607
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEI 476
G TV + G +F +G R +LG D G P ++
Sbjct: 608 CGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQL 648
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 181 (68.8 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 52/167 (31%), Positives = 81/167 (48%)
Query: 197 HRDTNRPIFRPRLVEALKGVPCKQVTAG--LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
+R+ + ++ P L GV + V +G + +T G + + G N GQLGHGDT
Sbjct: 129 YRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK 188
Query: 255 DRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
P+ I L EV +V A G ++ LA+T G V++FG LG G Q D + P
Sbjct: 189 RVEAPRLIEGLSHEV--IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PS 245
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
Q G + +++ G E + +D G +Y++G G LGH +
Sbjct: 246 PAQIMYN-GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSD 291
Score = 174 (66.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 322 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
G+ V V +G H + + + G +++WG+ G LGHGD P + L + V
Sbjct: 147 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVS 206
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
+ T L +TGSV+ FG G LG ++ +D V P + +++++ G
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLGNQ--TDAVPSPAQI-MYNGQPITKMACGA 263
Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDT 466
++++ +G L+ FG E QLGH++
Sbjct: 264 EFSMIMDCKGNLYSFGCPEYGQLGHNS 290
Score = 158 (60.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 49/160 (30%), Positives = 71/160 (44%)
Query: 145 GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
GP C++ R+ VV S + H+ + G++++ G N GH DT R +
Sbjct: 138 GPHRYGCLAGVRVRT-----VVSGSCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKR-V 190
Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIA 263
PRL+E L G N T LT G V G N GQLG G+ D P+P I
Sbjct: 191 EAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI- 249
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
+ + ++A G + + + G +YSFG LGH
Sbjct: 250 -MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGH 288
Score = 144 (55.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 38/136 (27%), Positives = 66/136 (48%)
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
++ L +T G ++S+G LGHG+ PR I+ + I V + G H +AL
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI--VSAACGRNHTLAL 217
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVY 397
+G V+ +G+ G LG G++ D +P P + + + A + +++D G++Y
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTD-AVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 398 GFGWMGFGSLGFPDRG 413
FG +G LG G
Sbjct: 277 SFGCPEYGQLGHNSDG 292
Score = 133 (51.9 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--ENHAAFV 178
H+LLI+ ++S G + G LGHG T+ V R+ +H V VSA+ NH +
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGD--TKRVEAPRL-IEGLSHEVIVSAACGRNHTLAL 217
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++G VF G+N G + + P + G P ++ G F+ + +G+++
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 239 TCGSNTHGQLGH 250
+ G +GQLGH
Sbjct: 277 SFGCPEYGQLGH 288
Score = 124 (48.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 45/192 (23%), Positives = 76/192 (39%)
Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
+++ I P+ V V +A G ++ L + V+S+G G LGH EQ DE+ PR
Sbjct: 316 IEKTKDGQILPVPNV-VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR 374
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
++ F G ++ AG A+ G ++ WG A E P+ + L
Sbjct: 375 LVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG-----ATNTSRE-STMYPKAVQDLC 428
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
+ K V D ++ FG LG+ D + +L
Sbjct: 429 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEV-KTLDGIFSE 487
Query: 434 QISTGLYHTVVV 445
Q++ G H++V+
Sbjct: 488 QVAMGYSHSLVI 499
Score = 109 (43.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQI 274
V + V G N T L + V + G +G+LGH + D P+ + + G QI
Sbjct: 330 VVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQI 389
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
AG + AV+ G ++ +G+ + + + P+A+Q G + ++ G
Sbjct: 390 YAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLC--GWRIRSLACGKSS 441
Query: 335 V-VALDSSGYVYTWGKGYC-GALGHGDEIDK--TLPEPLSSLKSHLAVQV 380
+ VA D S +WG G LG+GD K T + + +L + QV
Sbjct: 442 IIVAADES--TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQV 489
Score = 77 (32.2 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 30/128 (23%), Positives = 61/128 (47%)
Query: 87 NGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLG 143
+G+ KRV R ++ + H +++ ++A GR HTL ++ + SVF+ G + G LG
Sbjct: 184 HGDTKRVEAPRLIEGLSH--EVIVSAA------CGRNHTLALTETGSVFAFGENKMGQLG 235
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 203
G +T S +I + + + +++ + + G +++ G GH +
Sbjct: 236 LGNQTDAVPSPAQIMY-NGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKF 294
Query: 204 IFRPRLVE 211
I R + +E
Sbjct: 295 IARAQRIE 302
Score = 57 (25.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
V ++ G HT+V+ + R+F +G +LGH
Sbjct: 332 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH 364
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 38/133 (28%), Positives = 66/133 (49%)
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
H + + + G +++WG+ G LGHGD P+ + L + V + T L +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
G+VY FG G LG ++ +D VL P + + +++ G +++V +G L+
Sbjct: 194 GTVYTFGENKLGQLGQGNQ--TDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYS 250
Query: 454 FGDNERAQLGHDT 466
FG E QLGH++
Sbjct: 251 FGCPEYGQLGHNS 263
Score = 159 (61.0 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 44/131 (33%), Positives = 63/131 (48%)
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H+ + G++++ G N GH DT R + P+L+E L G N T LT
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKR-LEAPKLIEGLGEEVIVAAACGRNHTLALTE 192
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYS 292
G V+T G N GQLG G+ D S A ++ G +V++A G + + V G +YS
Sbjct: 193 NGTVYTFGENKLGQLGQGNQTDAVL--SPATIQYNGQPIVKVACGAEFSMIVDCKGNLYS 250
Query: 293 FGSGSNFCLGH 303
FG LGH
Sbjct: 251 FGCPEYGQLGH 261
Score = 158 (60.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 44/157 (28%), Positives = 71/157 (45%)
Query: 259 PKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P L +V V + +GP ++ L +T G ++S+G LGHG+ P+ I+
Sbjct: 112 PHRYGCLSDV-QVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIE 170
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
+ I V + G H +AL +G VYT+G+ G LG G++ D L
Sbjct: 171 GLGEEVI--VAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQP 228
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
V+V + ++ G++Y FG +G LG G
Sbjct: 229 IVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDG 265
Score = 133 (51.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
H+L+I+ ++S G + G LGHG +T + + I +V + NH + +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHG-DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE 192
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
+G V+T G+N G + + P ++ G P +V G F+ + +G++++
Sbjct: 193 NGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSF 251
Query: 241 GSNTHGQLGH 250
G +GQLGH
Sbjct: 252 GCPEYGQLGH 261
Score = 122 (48.0 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 39/172 (22%), Positives = 68/172 (39%)
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
+A G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ G +
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQ 367
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
AL G ++ WG + + P+ + L + K V D
Sbjct: 368 CSFALSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADD 421
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
++ FG LG+ D + +L + Q+ G H++V+
Sbjct: 422 STISWGPSPTFGELGYGDNKPKSSTTAQEV-KTLDGVYSEQVVMGYSHSLVI 472
Score = 69 (29.3 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
I+KT + + + +A V T VL V+ +G+ G+G LG ++ D+++
Sbjct: 289 IEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ--KDEMV- 345
Query: 421 PRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
PR+ L +QI G + +++ G LF +G
Sbjct: 346 PRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWG 382
Score = 54 (24.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
++ G HT+V+ + R+F +G +LGH
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGH 337
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 210 (79.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 58/202 (28%), Positives = 100/202 (49%)
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG----EQHDELQPRAIQTF--RRKGIHVV 326
+I +G + L + +G +YS+G+G LGHG ++ + P+ I TF +V
Sbjct: 249 KICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIV 308
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLA----VQV 380
++ G H + L + +YT+G G G LGHG D ++ +P+ + S + A +
Sbjct: 309 DIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSI 368
Query: 381 CARKR-KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
A +F + GSVY +GW GSLG G ++ P+ + SL ++ +I++G
Sbjct: 369 FAGDHANSFYITTDGSVYSWGWNDGGSLG---HGTNENHYSPKKIQSLS--NIKKITSGF 423
Query: 440 YHTVVVTDRGRLFGFGDNERAQ 461
HT+ + ++ FGDN Q
Sbjct: 424 KHTLAQSINNDIYVFGDNTFGQ 445
Score = 170 (64.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 57/200 (28%), Positives = 95/200 (47%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRP---TPKSIAPL---EEVGSV 271
K++ +G + L G +++ G+ G LGHG + D+ TPK I +
Sbjct: 248 KKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRI 307
Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTF--RRKGIHVV 326
V IA G + + +T + +Y+FG G LGHGE +D L P+ I++ G +
Sbjct: 308 VDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGE-NDTLNHYIPKRIKSTGDNAAGNKIK 366
Query: 327 RVSAGDE-HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
+ AGD + + + G VY+WG G+LGHG + P+ + SL S++ ++ + +
Sbjct: 367 SIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSL-SNIK-KITSGFK 424
Query: 386 KTFVLVDTGSVYGFGWMGFG 405
T +Y FG FG
Sbjct: 425 HTLAQSINNDIYVFGDNTFG 444
Score = 170 (64.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 56/235 (23%), Positives = 102/235 (43%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQT 317
+++ I +G + L VT + +Y +G LG E+ DE + I+
Sbjct: 177 NIISIVSGYEHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKPIKV 236
Query: 318 FRRKGI---HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG----DEIDKTLPEPLS 370
+ ++ +G +H + L + G +Y+WG GY GALGHG D+ + P+ ++
Sbjct: 237 LKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKIT 296
Query: 371 SL-----KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL- 424
+ +S + C F L + +Y FG+ FG LG + + + RI
Sbjct: 297 TFTLNNNESRIVDIACGGYHSMF-LTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKS 355
Query: 425 --DSLRAHHVSQISTGLY-HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
D+ + + I G + ++ +T G ++ +G N+ LGH T P +I
Sbjct: 356 TGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKI 410
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 55/201 (27%), Positives = 95/201 (47%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT---------QCVSFTRINFPSAAH 164
+I +G H LL+ N S++S G+ G LGHG + + +FT N + +
Sbjct: 249 KICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNN--NESR 306
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDT-NRPIFRPRLVEAL----KGVP 217
+V ++ H+ F+ +++T G GH DT N I P+ +++ G
Sbjct: 307 IVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYI--PKRIKSTGDNAAGNK 364
Query: 218 CKQVTAGLNFTGF-LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K + AG + F +T G V++ G N G LGHG + +PK I + + ++ +I +
Sbjct: 365 IKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKI---QSLSNIKKITS 421
Query: 277 GPSYMLAVTGNGVVYSFGSGS 297
G + LA + N +Y FG +
Sbjct: 422 GFKHTLAQSINNDIYVFGDNT 442
Score = 129 (50.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 37/143 (25%), Positives = 70/143 (48%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT------QCVSFTRINFPSAAHVV 166
+ I G YH++ ++N + +++ G G LGHG T + + T N +A + +
Sbjct: 308 VDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDN--AAGNKI 365
Query: 167 QVSASENHAA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+ + +HA ++ G V++ G N GH TN + P+ +++L + K++T+G
Sbjct: 366 KSIFAGDHANSFYITTDGSVYSWGWNDGGSLGH-GTNENHYSPKKIQSLSNI--KKITSG 422
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ 247
T +I ++ G NT GQ
Sbjct: 423 FKHTLAQSINNDIYVFGDNTFGQ 445
Score = 38 (18.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 128 NSSVFSCGSSLCGVLGHG 145
++ ++S G S GVLG G
Sbjct: 135 DNQLYSIGKSKYGVLGIG 152
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 192 (72.6 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 73/246 (29%), Positives = 113/246 (45%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 349
G LG + E+ P ++ + K VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVE-LQEK---VVQVSAGDSHTAALTDDGRVFLWGSFR 147
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 408
G +G + + K++ P+ V+V + +L G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSMV-PVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
Query: 409 ----FPDRGVS---DKVLRPR--ILDSL--RAH-HVSQISTGLYHTVVVTDRGRLFGFGD 456
F +RG +++L P+ +L S R H G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 266
Query: 457 NERAQL 462
+ QL
Sbjct: 267 SNYHQL 272
Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 73/256 (28%), Positives = 113/256 (44%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + + G V T G G + +P LV + V Q AG T L+
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVV--QAEAGGMHTVCLS 83
Query: 233 IRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G V++ G N G LG +++ P + L+E VVQ++AG S+ A+T +G V
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE--KVVQVSAGDSHTAALTDDGRV 140
Query: 291 YSFGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
+ +GS +N +G E + P +Q + VV+V++G++H+V L + G +YT
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQL----DVPVVKVASGNDHLVMLTADGDLYTL 196
Query: 348 GKGYCGALGHGDEI----------DKTLPEPLSSLKS-----HLAVQ-VCARKRKTFVLV 391
G G G LG E+ ++ L LKS H+ Q TF +
Sbjct: 197 GCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 256
Query: 392 DTGSVYGFGWMGFGSL 407
G VYGFG + L
Sbjct: 257 HEGHVYGFGLSNYHQL 272
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 54/181 (29%), Positives = 81/181 (44%)
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
T G+V + G G LG GE E + A+ + VV+ AG H V L SG V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPED---VVQAEAGGMHTVCLSKSGQV 88
Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
Y++G GALG ++ + P VQV A T L D G V F W F
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRV--FLWGSF 146
Query: 405 -GSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
+ G G+ + + + + ++ V ++++G H V++T G L+ G E+ QL
Sbjct: 147 RDNNGVI--GLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQL 204
Query: 463 G 463
G
Sbjct: 205 G 205
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 64/217 (29%), Positives = 95/217 (43%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + G+VF G DN+ G + + P V+ VP
Sbjct: 120 K--VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDVPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH---------G-DTLDRP-TPKSIAPLEE 267
+V +G + LT G ++T G GQLG G L+R PK + L+
Sbjct: 175 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVM-LKS 233
Query: 268 VGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNF 299
GS + G + A++ G VY FG SN+
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL-SNY 269
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 183 (69.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 50/166 (30%), Positives = 80/166 (48%)
Query: 197 HRDTNRPIFRPRLVEALKGVPCKQVTAG--LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
+R+ + ++ P L GV + V +G + +T G + + G N GQLGHGDT
Sbjct: 127 YRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTK 186
Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
P+ I L ++V A G ++ LA+T G V++FG LG G Q D + P
Sbjct: 187 RVEAPRLIEALSHE-AIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAV-PSP 244
Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
Q G + +++ G E + +D G +Y++G G LGH +
Sbjct: 245 AQIMYN-GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSD 289
Score = 176 (67.0 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 46/148 (31%), Positives = 77/148 (52%)
Query: 322 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
G+ V V +G H + + + G +++WG+ G LGHGD P + +L SH A+
Sbjct: 145 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEAL-SHEAIV 203
Query: 380 VCARKRK-TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
+ A R T L DTGSV+ FG G LG ++ +D V P + +++++ G
Sbjct: 204 LAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ--TDAVPSPAQI-MYNGQPITKMACG 260
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDT 466
++++ +G L+ FG E QLGH++
Sbjct: 261 AEFSMLMDCKGNLYSFGCPEYGQLGHNS 288
Score = 164 (62.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 51/160 (31%), Positives = 72/160 (45%)
Query: 145 GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
GP C+S R+ VV S + H+ + G++++ G N GH DT R +
Sbjct: 136 GPHRYGCLSGVRVRT-----VVSGSCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKR-V 188
Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIA 263
PRL+EAL G N T LT G V G N GQLG G+ D P+P I
Sbjct: 189 EAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI- 247
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
+ + ++A G + + + G +YSFG LGH
Sbjct: 248 -MYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGH 286
Score = 150 (57.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
++ L +T G ++S+G LGHG+ PR I+ + I V + G H +AL
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAI--VLAACGRNHTLAL 215
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVY 397
+G V+ +G+ G LG G++ D +P P + + + A + +L+D G++Y
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTD-AVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 398 GFGWMGFGSLGFPDRG 413
FG +G LG G
Sbjct: 275 SFGCPEYGQLGHNSDG 290
Score = 126 (49.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 122 HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSASENHAAFV 178
H+LLI+ ++S G + G LGHG T+ V R+ + +H +V + NH +
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGD--TKRVEAPRL-IEALSHEAIVLAACGRNHTLAL 215
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
+G VF G+N G + + P + G P ++ G F+ + +G+++
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 239 TCGSNTHGQLGH 250
+ G +GQLGH
Sbjct: 275 SFGCPEYGQLGH 286
Score = 126 (49.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 45/192 (23%), Positives = 76/192 (39%)
Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
+++ I P+ V V +A G ++ L + V+S+G G LGH EQ DE+ PR
Sbjct: 314 IEKTKDGQILPVPNV-VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR 372
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
++ F G ++ AG A+ G ++ WG A E P+ + L
Sbjct: 373 LVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG-----ATNTSRE-STMYPKAVQDLC 426
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
+ K V D ++ FG LG+ D + +L
Sbjct: 427 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEV-KTLDGIFSE 485
Query: 434 QISTGLYHTVVV 445
Q++ G H++V+
Sbjct: 486 QVAMGYSHSLVI 497
Score = 111 (44.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 44/170 (25%), Positives = 74/170 (43%)
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQI 274
V + V G N T L + V + G +G+LGH + D P+ + + G QI
Sbjct: 328 VVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQI 387
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
AG + AV+ G ++ +G+ + + + P+A+Q G + ++ G
Sbjct: 388 YAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLC--GWRIRSLACGKSS 439
Query: 335 V-VALDSSGYVYTWGKGYC-GALGHGDEIDK--TLPEPLSSLKSHLAVQV 380
+ VA D S +WG G LG+GD K T + + +L + QV
Sbjct: 440 IIVAADES--TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQV 487
Score = 75 (31.5 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 29/128 (22%), Positives = 60/128 (46%)
Query: 87 NGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLG 143
+G+ KRV R ++++ H + ++ GR HTL ++++ SVF+ G + G LG
Sbjct: 182 HGDTKRVEAPRLIEALSHEAIVLAAC--------GRNHTLALTDTGSVFAFGENKMGQLG 233
Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 203
G +T S +I + + + +++ + + G +++ G GH +
Sbjct: 234 LGNQTDAVPSPAQIMY-NGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKF 292
Query: 204 IFRPRLVE 211
I R + +E
Sbjct: 293 IARAQRIE 300
Score = 57 (25.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
V ++ G HT+V+ + R+F +G +LGH
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH 362
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 202 (76.2 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 76/271 (28%), Positives = 120/271 (44%)
Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T+ G+V CG+ GQLG G D L+R K ++P+ + V I+AG + L +T +G +
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGEDILER---KRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 291 YSFGSGSNFCLGHGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
YSFG LG D E +P I G + +SAGD H L G V+ WG
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDL---PG-KALCISAGDSHSACLLEDGRVFAWG 151
Query: 349 KGYCGALGH-GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
+ + G+ G ID P+ ++ + + + +L G V+ G G L
Sbjct: 152 S-FRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQL 210
Query: 408 G-FPDRGVSDK-------VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNE 458
G +R +S + +LRP L RA I Y T + + + ++ G N
Sbjct: 211 GRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNN 270
Query: 459 RAQLGHDTLRG---CLEPTEIFIQEMEEDTG 486
QL H+T +G L P + ++++ G
Sbjct: 271 FKQLAHET-KGKEFALTPIKTELKDIRHIAG 300
Score = 157 (60.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 60/236 (25%), Positives = 102/236 (43%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR----INFPSAAHVVQVSA 170
I +G H ++++ + VF+ G + G LG E + R + P+ + +
Sbjct: 183 IASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKP 242
Query: 171 SE-----NHAAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
E N+ F+ +S ++ G N+ H + + LK + + +
Sbjct: 243 FEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDI--RHIAG 300
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 282
G + T LT G +G+LG GD D P + L E +V + G
Sbjct: 301 GQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE--KIVSVGCGEVCSY 358
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
AVT +G +YS+GSG N LG G+ DEL+P + + +G H++ S G +H + L
Sbjct: 359 AVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFL 414
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 87/352 (24%), Positives = 144/352 (40%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
+ I+ G H L+++ S ++S G + G LG +T++ S ++ I+ P A + +S
Sbjct: 77 VDISAGGMHNLVLTKSGDIYSFGCNDEGALGR--DTSEDGSESKPDLIDLPGKA--LCIS 132
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL--VEALKGVPCKQVTAGLNF 227
A ++H+A +L+ G+VF G SF H + I + ++ ++G C + +G +
Sbjct: 133 AGDSHSACLLEDGRVFAWG---SFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADH 189
Query: 228 TGFLTIRGHVHTCGSNTHGQLGH-------GD------TLDRPTPKSIAPLEEVGSVVQI 274
LT G V T G GQLG G+ L RPT I + ++
Sbjct: 190 LVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIW-- 247
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
A + + V+++ G + L H + E I+T K I ++ G H
Sbjct: 248 ATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT-ELKDIR--HIAGGQHH 304
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
V L + G+ G LG GD D P + L + C V +D
Sbjct: 305 TVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTID- 363
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVSQISTGLYHTV 443
G +Y +G LG D D L P ++ S + H+ S G H +
Sbjct: 364 GKLYSWGSGVNNQLGVGD---GDDELEPIVVVSKNTQGKHMLLASGGGQHAI 412
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 86/353 (24%), Positives = 142/353 (40%)
Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+V CG+ G LG G + + + + P A V +SA H + +SG +++ G
Sbjct: 43 NVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDA---VDISAGGMHNLVLTKSGDIYSFG 99
Query: 189 DNSSFCCGHRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NT 244
N G RDT+ +P L++ C ++AG + + L G V GS ++
Sbjct: 100 CNDEGALG-RDTSEDGSESKPDLIDLPGKALC--ISAGDSHSACLLEDGRVFAWGSFRDS 156
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
HG +G T+D I +E G+V IA+G +++ +T G V++ G LG
Sbjct: 157 HGNMGL--TIDGNKRTPIDLME--GTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGR 212
Query: 304 -------GE----QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
GE + D L+P + R K + + + + S W G
Sbjct: 213 LSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWAT---NYCTFMRESQTQVIWATGLN 269
Query: 353 G--ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
L H + + P+ + + + + T +L G +G LG
Sbjct: 270 NFKQLAHETKGKEFALTPIKTELKDIR-HIAGGQHHTVILTTDLKCSVVGRPEYGRLGLG 328
Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
D V D V +P I+ L VS + G + VT G+L+ +G QLG
Sbjct: 329 D--VKDVVEKPTIVKKLTEKIVS-VGCGEVCSYAVTIDGKLYSWGSGVNNQLG 378
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 74/308 (24%), Positives = 128/308 (41%)
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTC 240
G V CG+ G I + + + G+P ++AG LT G +++
Sbjct: 42 GNVLVCGNGD---VGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSF 98
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
G N G LG DT + + ++ G + I+AG S+ + +G V+++GS F
Sbjct: 99 GCNDEGALGR-DTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGS---FR 154
Query: 301 LGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG---KGYCGAL- 355
HG + + +G +++G +H+V L ++G V+T G +G G L
Sbjct: 155 DSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLS 214
Query: 356 -----GHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVD-TGSVYGFGWMGFGSL 407
G G + L P L ++ + A TF+ T ++ G F L
Sbjct: 215 ERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQL 274
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
+G + L P I L+ + I+ G +HTV++T + G E +LG +
Sbjct: 275 AHETKG-KEFALTP-IKTELK--DIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDV 330
Query: 468 RGCLE-PT 474
+ +E PT
Sbjct: 331 KDVVEKPT 338
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 63/281 (22%), Positives = 114/281 (40%)
Query: 101 EHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
E D+++ + I+ G H+ L+ + VF+ GS G+ T T I+
Sbjct: 116 ESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGS-FRDSHGNMGLTIDGNKRTPIDL 174
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFT--CGDNSSF-------CCGH-RDTNRPIFRPRL 209
+++ +H + +G+VFT C + G R R + RP
Sbjct: 175 MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQ 234
Query: 210 VEALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE- 266
+ + P + + A N+ F+ + + G N QL H +T + ++ P++
Sbjct: 235 LIITRAKPFEAIWA-TNYCTFMRESQTQVIWATGLNNFKQLAH-ETKGKEF--ALTPIKT 290
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHV 325
E+ + IA G + + +T + G LG G+ D ++ P ++ K +
Sbjct: 291 ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEK---I 347
Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
V V G+ A+ G +Y+WG G LG GD D+ P
Sbjct: 348 VSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEP 388
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 188 (71.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 67/235 (28%), Positives = 110/235 (46%)
Query: 183 QVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVH 238
+V +CG+ + GH R T + +PR V+ + G+ Q AG + LT G V+
Sbjct: 153 RVLSCGEGEAL--GHPGRTTTK---KPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVY 207
Query: 239 TCGSNTHGQL---G---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
CG N G + G G T + K +E+ G +V +AAG S+ A+T G V +
Sbjct: 208 MCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIA 267
Query: 293 FGSGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
+G+ N G+ + H ++Q + + +V+++AG+ H+V LD G + T+G
Sbjct: 268 WGNLRN-SNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGD 326
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKS--HLAVQVCARKRKTFVLVDTGSVYGFG-W 401
G G LG KT+ +S HL V + + + F V +V+ G W
Sbjct: 327 GEMGQLGRSSRT-KTIRSKYMCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFW 380
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 69/239 (28%), Positives = 98/239 (41%)
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
T S + L T R K +APL + PS + G+ V+ S G G
Sbjct: 113 TINSTMNSTLNEPKTPGRKQAKLVAPL-----LTYDLFAPS----IIGDRVL-SCGEGE- 161
Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG---KGYCGAL 355
LGH + +PR + F +G+ ++ AG H L S G VY G KG A
Sbjct: 162 -ALGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAE 220
Query: 356 G---HG--DEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G DE K E + K V + A T L D GSV +G + S G
Sbjct: 221 GVEKEGSTDEFAKVKFEEDIE--KEGKIVMLAAGASFTAALTDQGSVIAWGNLR-NSNGN 277
Query: 410 PD-RGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
D + K+ P ++ + +I+ G H V++ ++G L FGD E QLG +
Sbjct: 278 VDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSS 336
Score = 109 (43.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 48/191 (25%), Positives = 81/191 (42%)
Query: 126 ISNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
I V SCG LGH G TT+ I +Q A H+A + G+V
Sbjct: 149 IIGDRVLSCGEG--EALGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEV 206
Query: 185 FTCGDNSSFCC---G-HRDTNRPIF-RPRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVH 238
+ CG N G ++ + F + + E + K + AG +FT LT +G V
Sbjct: 207 YMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVI 266
Query: 239 TCGS--NTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
G+ N++G + L + + + + +V+IAAG ++++ + G + +FG
Sbjct: 267 AWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGD 326
Query: 296 GSNFCLGHGEQ 306
G LG +
Sbjct: 327 GEMGQLGRSSR 337
Score = 90 (36.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 32/127 (25%), Positives = 56/127 (44%)
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHG-----DEIDKTLPEPLSSLK-SHLAVQVCARK 384
G +HVV L S G V+ GK ALG G D+ L + + ++ V V A+
Sbjct: 442 GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKL 501
Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL-RPRILDSLRAHHVSQISTGL--YH 441
+ + G+ Y +G+ G LG + +K++ +P + S S I + H
Sbjct: 502 ATSIAWSEDGTAYAWGFDTTGQLGLGLKDEDEKMVSKPEEISSAHLDGYSIIGASISDQH 561
Query: 442 TVVVTDR 448
T+++ +
Sbjct: 562 TLIIAKK 568
Score = 58 (25.5 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFP-DR------GVSDKVLR---PRILDSLRAHHVSQIS 436
T V + G Y FG + LG D G ++ LR P + A
Sbjct: 381 TIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNI 440
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE-IF--IQEMEEDT 485
G+ H V++ G++F G N LG G + ++ IQE+E D+
Sbjct: 441 EGVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDS 492
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 195 (73.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 65/265 (24%), Positives = 122/265 (46%)
Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR------INFPSAAHVVQ 167
++I++GR H+L+ +N VF+ G + G G PE V + ++FP++ ++
Sbjct: 125 LEISSGRAHSLIRTNLGVFAIGDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEPIIS 184
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLN 226
+ S + + V SG VF+ G N CG+ + P V ++G ++V+ +
Sbjct: 185 IHCSMDTSFVVDSSGAVFSFGLNEDGQCGNEAYGIQ-WEPAKVRGDVEGSKIQKVSGSTD 243
Query: 227 FTGFLTIRGHVHTCGSNTHGQL-GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ G + G +GQ G D + T + +A +G ++ + + S ++A
Sbjct: 244 TLLACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVA--NSLGPIICVDSTQSSVVARN 301
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G V+ +G G LG G + + L+ P + G V VSAG+ + A++ G +
Sbjct: 302 SRGNVFVWGVG---VLGMGPEAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRL 358
Query: 345 YTWGKGYCGALGHGDEIDKTLPEPL 369
+ WG+ +LG G + + P L
Sbjct: 359 FIWGENRYSSLGLGHQKRQLFPYQL 383
Score = 162 (62.1 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 82/370 (22%), Positives = 152/370 (41%)
Query: 130 SVFSCGSSLCGVLG------HGPETTQCVS-FT-RINFPSAAHVVQVSASENHAAFVLQS 181
+V+ CG S G L + + T + F RI + + + +S+ + F ++
Sbjct: 25 AVYGCGLSASGALAIPKLVANSDDVTAGEARFPKRIAYFNTKSIKFISSGFGFSLFASKN 84
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVP---CKQVTAGLNFTGFLTIRGHV 237
+++ G N+ F G + TN ++ + A K +P ++++G + T G V
Sbjct: 85 -RLYGAGINNRFQIGGQLTNINKYQDYYISAKKINIPGDEILEISSGRAHSLIRTNLG-V 142
Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVG-----SVVQIAAGPSYMLAVTGNGVVY 291
G N GQ G + +D +PL + ++ I V +G V+
Sbjct: 143 FAIGDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEPIISIHCSMDTSFVVDSSGAVF 202
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
SFG + G+ + +P ++ +G + +VS + ++A +G ++ WG+
Sbjct: 203 SFGLNEDGQCGNEAYGIQWEPAKVRG-DVEGSKIQKVSGSTDTLLACSENGEIFIWGQTE 261
Query: 352 CG-ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
G A G DEI +++ L +C ++ V+ F W G G LG
Sbjct: 262 YGQAAGATDEIQLNTSRHVAN---SLGPIICVDSTQSSVVARNSRGNVFVW-GVGVLGMG 317
Query: 411 DRGVSDKVLRPRILDS--LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
S K P +D V+ +S G + + GRLF +G+N + LG +
Sbjct: 318 PEAESLKT--PTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFIWGENRYSSLGLGHQK 375
Query: 469 GCLEPTEIFI 478
L P ++F+
Sbjct: 376 RQLFPYQLFL 385
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 196 (74.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 81/272 (29%), Positives = 118/272 (43%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS- 261
P+ RP+ + L QV+ G + LT R V + G+N HGQ G D +S
Sbjct: 164 PLDRPQETKVL------QVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESH 217
Query: 262 -IAPLEEV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ +++ G VVQ+ G + L +T G VYS G G++ G G + P +
Sbjct: 218 KVHRMQDFEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGG-D 276
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
G+ VV+V+ + +AL + G V+ WG Y D +P L
Sbjct: 277 LAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVK 336
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR---PRILDSLRAHH---- 431
QV +L + G V F W G+G LG +S+ L P L L +
Sbjct: 337 QVACGGTGCAILNEEGHV--FVW-GYGILG-KGPNLSETALPEMIPPTLFGLTEFNPEVK 392
Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
VSQI GL H +T++G LF +G N R LG
Sbjct: 393 VSQIRCGLSHFAALTNKGELFVWGKNIRGCLG 424
Score = 186 (70.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 62/214 (28%), Positives = 98/214 (45%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPC 218
P V+QVS H+ + VF+ G+N+ CG + ++ V ++
Sbjct: 168 PQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEG 227
Query: 219 K--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIA 275
+ QV G + + FLT +G V++CG GQ G G TP + L V +VVQ+A
Sbjct: 228 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGV-TVVQVA 286
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
LA++ +G V+ +G+ L ++ PR + F G V +V+ G
Sbjct: 287 TYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVG-KVKQVACGGTG 344
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPE 367
L+ G+V+ WG Y G LG G + +T LPE
Sbjct: 345 CAILNEEGHVFVWG--Y-GILGKGPNLSETALPE 375
Score = 182 (69.1 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 73/268 (27%), Positives = 119/268 (44%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPS--AAHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + +++ VVQV
Sbjct: 174 LQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVV 233
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH + T+ P +L L GV QV +
Sbjct: 234 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTP---SKLGGDLAGVTVVQVATYGD 290
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
L+ G V G++ + QL D+ P+ + P VG V Q+A G + +
Sbjct: 291 CCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCL-PFSGVGKVKQVACGGTGCAILN 349
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQ------TFRRKGIHVVRVSAGDEHVVAL 338
G V+ +G G LG G E P I T + V ++ G H AL
Sbjct: 350 EEGHVFVWGYG---ILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAAL 406
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ G ++ WGK G LG G D+ P
Sbjct: 407 TNKGELFVWGKNIRGCLGIGRLEDQYFP 434
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 188 (71.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 77/337 (22%), Positives = 147/337 (43%)
Query: 141 VLGHGPETTQCVSFTRINFPSAAH---VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
+ G+G + + + I F + +V +S H++F+ G ++T GD GH
Sbjct: 163 IWGNGIRNYKNCNMSSIGFSEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGH 222
Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
+ P+LVE + P +V + G + LTI G V++ G N QLG G+
Sbjct: 223 GNLES-YSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNG- 280
Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
+ S L ++ I SY N + + +N G +Q L +
Sbjct: 281 ---SSSSYYSLPQL-----INFNISYNNNNNNNNNNSTNNNNNNNNDG-AQQQFSLSQNS 331
Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE--IDKTLPEPLSSL 372
+ I +V++S G + G ++T+G+G G LG G++ + ++ P+ + SL
Sbjct: 332 SSNNNK--IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSL 389
Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLR---PRILDS 426
+ H + + + + VL + G V+ FG G LG F ++ K ++
Sbjct: 390 QGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQ 449
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ ++ ++S G YH++ ++D + +G ++ LG
Sbjct: 450 QQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG 486
Score = 176 (67.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 56/227 (24%), Positives = 110/227 (48%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRV 328
+V+++ G + +T G++++FG G + LG GEQ +Q P+ +Q+ + G ++ +
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQ--GHFIIDM 397
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLA--------VQ 379
S+G H + L + G V+++G+ G LG G +T+P+ + ++ ++
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVS--QI 435
V A + + D Y +G +G LG D+ L P +++S + +V +
Sbjct: 458 VSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNL-PVLINSNSVVVDNVKFIDV 516
Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
S+G H V ++ G L+ +G N +LG + L P + FI +
Sbjct: 517 SSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINSKD 563
Score = 159 (61.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 56/217 (25%), Positives = 102/217 (47%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V++S N +A + G +FT G D+ G + P+LV++L+G ++
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQS-TPKLVQSLQGHFIIDMS 398
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIA-------PLEEVGSVVQI 274
+G + LT +G V + G N GQLG G ++ T PK I ++ +++++
Sbjct: 399 SGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAIQTFRR--KGIHVVRVSA 330
+AG + +A++ N Y++G LG Q D P I + + + VS+
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSS 518
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
G +H VA+ G +Y+WG LG + ++ P+
Sbjct: 519 GFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPK 555
Score = 80 (33.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVSA 170
I+TG H+ I++ ++++ G L G LGHG + + V F + PS VV ++
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTK-PSL-RVVSIAN 250
Query: 171 SENHAAFVLQSGQVFTCGDNSS 192
H+ + G+V++ G N S
Sbjct: 251 GGKHSLALTICGKVYSWGGNDS 272
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 194 (73.4 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 80/271 (29%), Positives = 118/271 (43%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS- 261
P+ RP+ + L QV+ G + LT R V + G+N+HGQ G D +S
Sbjct: 164 PLDRPQETKVL------QVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESH 217
Query: 262 -IAPLEEV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ +++ G VVQ+ G + L +T G VYS G G++ G G + P +
Sbjct: 218 KVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGG-D 276
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
G+ VV+V+ + +AL + G V+ WG Y D +P L
Sbjct: 277 LAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVK 336
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHH----V 432
QV VL G V F W G+G LG + + + + P L L + V
Sbjct: 337 QVACGGTGCAVLNAEGHV--FVW-GYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQV 393
Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
SQI GL H +T++G LF +G N R LG
Sbjct: 394 SQIRCGLSHFAALTNKGELFVWGKNIRGCLG 424
Score = 186 (70.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 62/214 (28%), Positives = 100/214 (46%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPC 218
P V+QVS H+ + VF+ G+NS CG + ++ V ++
Sbjct: 168 PQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDG 227
Query: 219 K--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIA 275
+ QV G + + FLT +G V++CG GQ G G TP + L V +VVQ+A
Sbjct: 228 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGV-TVVQVA 286
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
LA++ +G V+ +G+ L ++ PR + F G V +V+ G
Sbjct: 287 TYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVG-KVKQVACGGTG 344
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPE 367
L++ G+V+ WG Y G LG G ++ +T +PE
Sbjct: 345 CAVLNAEGHVFVWG--Y-GILGKGPKLLETAIPE 375
Score = 181 (68.8 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 73/268 (27%), Positives = 120/268 (44%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + +++ VVQV
Sbjct: 174 LQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVV 233
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH + T+ P +L L GV QV +
Sbjct: 234 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTP---SKLGGDLAGVTVVQVATYGD 290
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
L+ G V G++ + QL D+ P+ + P VG V Q+A G + +
Sbjct: 291 CCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCL-PFSGVGKVKQVACGGTGCAVLN 349
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQ------TFRRKGIHVVRVSAGDEHVVAL 338
G V+ +G G LG G + E P I T + V ++ G H AL
Sbjct: 350 AEGHVFVWGYG---ILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAAL 406
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ G ++ WGK G LG G D+ P
Sbjct: 407 TNKGELFVWGKNIRGCLGIGRLEDQYFP 434
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 194 (73.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 68/216 (31%), Positives = 102/216 (47%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVP 217
P V+QVS H+ VL G+ VF+ G+NS CG + I+ V ++
Sbjct: 177 PQETQVLQVSCGRAHS-LVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFD 235
Query: 218 CK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVVQ 273
+ QV G + + FLT +G V++CG GQ LGH + PT K L V +VVQ
Sbjct: 236 GQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPT-KLGGDLAGV-NVVQ 293
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 332
+A LAV+ +G ++ +G+ L ++ PR + F G V + + G
Sbjct: 294 VATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVG-QVKQAACGG 351
Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPE 367
L+ G+V+ WG Y G LG G + +T LPE
Sbjct: 352 TGCAVLNGEGHVFVWG--Y-GILGKGPNLVETALPE 384
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 77/273 (28%), Positives = 121/273 (44%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS- 261
P+ RP+ + L QV+ G + LT V + G+N++GQ G + +S
Sbjct: 173 PLHRPQETQVL------QVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESH 226
Query: 262 -IAPLEEV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ +++ G VVQ+A G + L +T G VYS G G++ G G + P +
Sbjct: 227 KVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGG-D 285
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKTLPE--PLSSLKSHL 376
G++VV+V+ + +A+ + G ++ WG Y D +P P S + +
Sbjct: 286 LAGVNVVQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGV-GQV 344
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD---KVLRPRI--LDSLRAH- 430
C T V G + F W G+G LG V +++ P + L L
Sbjct: 345 KQAACGG---TGCAVLNGEGHVFVW-GYGILGKGPNLVETALPEMIPPTLFGLTELNPEV 400
Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
VS+I GL H +TDRG LF +G N R LG
Sbjct: 401 RVSRIRCGLSHFAALTDRGELFVWGKNIRGCLG 433
Score = 185 (70.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 73/268 (27%), Positives = 119/268 (44%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + +++ VVQV+
Sbjct: 183 LQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQVA 242
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH + T+ P +L L GV QV +
Sbjct: 243 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPT---KLGGDLAGVNVVQVATYGD 299
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
++ G + G++ + QL D+ P+ + P VG V Q A G + +
Sbjct: 300 CCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCL-PFSGVGQVKQAACGGTGCAVLN 358
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQ------TFRRKGIHVVRVSAGDEHVVAL 338
G G V+ +G G LG G E P I T + V R+ G H AL
Sbjct: 359 GEGHVFVWGYG---ILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAAL 415
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
G ++ WGK G LG G D+ P
Sbjct: 416 TDRGELFVWGKNIRGCLGIGRLEDQYFP 443
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 198 (74.8 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 51/150 (34%), Positives = 76/150 (50%)
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G V G N GQLG D DR +P + L VV I+ G + +T +G V++FG
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
+GS LGH +DE+ PR + G V +++ G +H +A + SSG +Y +G G G
Sbjct: 83 AGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKG 140
Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
LG G + P P+ + + Q+ AR
Sbjct: 141 QLGTGHTCNVKCPSPVKGYWAAHSGQLSAR 170
Score = 170 (64.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 46/150 (30%), Positives = 68/150 (45%)
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
G V+ +G + LG ++ D P ++ R + VV +S G+EH L SG V+T+
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTF 81
Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGS 406
G G CG LGH D+ P + L Q+ ++ T V +G +Y FG G
Sbjct: 82 GAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQ 141
Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
LG G + V P + A H Q+S
Sbjct: 142 LG---TGHTCNVKCPSPVKGYWAAHSGQLS 168
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 44/139 (31%), Positives = 66/139 (47%)
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
+ G V+ WG G LG DE D+ P + L++ V + + T VL +G V+ F
Sbjct: 22 AEGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 81
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNE 458
G G LG ++D+V R+L+ L V+QI+ G HT+ V G ++ FG
Sbjct: 82 GAGSCGQLGHDS--MNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 138
Query: 459 RAQLG--HDTLRGCLEPTE 475
+ QLG H C P +
Sbjct: 139 KGQLGTGHTCNVKCPSPVK 157
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 53/166 (31%), Positives = 76/166 (45%)
Query: 182 GQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
G VF G N++ G D +R P V+ L+ ++ G T LT G V T
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRE--SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 81
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSN 298
G+ + GQLGH D P+ + LE +GS V QIA G + LA V +G++Y+FG G+
Sbjct: 82 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 299 FCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSG 342
LG G + P ++ + G R H+V SG
Sbjct: 140 GQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSG 185
Score = 139 (54.0 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 42/137 (30%), Positives = 57/137 (41%)
Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
+ +VF G + G LG E + S + VV +S E H A + +SG VFT
Sbjct: 22 AEGAVFGWGMNNAGQLGLSDEEDR-ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTIRGHVHTCGSNTH 245
G S GH N + PR V L G Q+ G T F+ G ++ G
Sbjct: 81 FGAGSCGQLGHDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 246 GQLGHGDTLDRPTPKSI 262
GQLG G T + P +
Sbjct: 140 GQLGTGHTCNVKCPSPV 156
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 192 (72.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 69/217 (31%), Positives = 102/217 (47%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIF----RPRLVEALK 214
P V+QVS H+ VL G+ VF+ G+NS CG + I+ R ++
Sbjct: 171 PQETRVLQVSCGRAHS-LVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFD 229
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVV 272
G QV G + + FLT +G V++CG GQ LGH + PT K L V +VV
Sbjct: 230 G-QVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPT-KLGGDLAGV-NVV 286
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAG 331
Q+A LAV+ +G ++ +G+ L ++ PR + F G V + + G
Sbjct: 287 QVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLP-FSGVG-QVKQAACG 344
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPE 367
L+ G+V+ WG Y G LG G + +T LPE
Sbjct: 345 GTGCAVLNGEGHVFVWG--Y-GILGKGPNLLETALPE 378
Score = 191 (72.3 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 75/268 (27%), Positives = 121/268 (45%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + R++ VVQV+
Sbjct: 177 LQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVA 236
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH + T+ P +L L GV QV +
Sbjct: 237 CGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPT---KLGGDLAGVNVVQVATYGD 293
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
++ G + G++ + QL D+ P+ + P VG V Q A G + +
Sbjct: 294 CCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL-PFSGVGQVKQAACGGTGCAVLN 352
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQT--FR----RKGIHVVRVSAGDEHVVAL 338
G G V+ +G G LG G E P I F G+ V R+ G H AL
Sbjct: 353 GEGHVFVWGYG---ILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAAL 409
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ G ++ WGK G LG G D+ P
Sbjct: 410 TNRGELFVWGKNIRGCLGIGRLEDQYFP 437
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 74/273 (27%), Positives = 120/273 (43%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS- 261
P+ RP+ L QV+ G + LT V + G+N++GQ G + +S
Sbjct: 167 PLDRPQETRVL------QVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESH 220
Query: 262 -IAPLEEV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ +++ G VVQ+A G + L +T G VYS G G++ G G + P +
Sbjct: 221 RVHRMQDFDGQVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGG-D 279
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKTLPE--PLSSLKSHL 376
G++VV+V+ + +A+ + G ++ WG Y D +P P S + +
Sbjct: 280 LAGVNVVQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGV-GQV 338
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-PD--RGVSDKVLRPRILDSLRAH--- 430
C T V G + F W G+G LG P+ +++ P + +
Sbjct: 339 KQAACGG---TGCAVLNGEGHVFVW-GYGILGKGPNLLETALPEMIPPTLFGLSEFNPGV 394
Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
VS+I GL H +T+RG LF +G N R LG
Sbjct: 395 QVSRIRCGLSHFAALTNRGELFVWGKNIRGCLG 427
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 143 (55.4 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
R+ G EH + LD++G V++WG G G LGHG + P L +L+ +V A
Sbjct: 168 RLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWH 227
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
+ + +TG +Y +GW G L P R +++
Sbjct: 228 SVCVSETGDIYIWGWNESGQLALPARSLAE 257
Score = 131 (51.2 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P P PL ++ G + L + G V+S+G G + LGHG E +PR ++
Sbjct: 152 PQPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLE 211
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
+ G+ + V+AG H V + +G +Y WG G L
Sbjct: 212 ALQ--GLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 248
Score = 98 (39.6 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
P +RP L L+ +++ G L G V + G HGQLGHG P+ +
Sbjct: 155 PFYRP-LAPTLRA---RRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVL 210
Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
L+ + + ++AAG + + V+ G +Y +G
Sbjct: 211 EALQGL-PMAEVAAGGWHSVCVSETGDIYIWG 241
Score = 97 (39.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
HA + +GQVF+ G GH T PR++EAL+G+P +V AG + ++
Sbjct: 175 HALLLDAAGQVFSWGGGRHGQLGH-GTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSE 233
Query: 234 RGHVHTCGSNTHGQLG-HGDTL--DRPTPKSIAP-LEEVGSVVQIAA-----GPSYMLAV 284
G ++ G N GQL +L D T AP L E GS + A GP+ +AV
Sbjct: 234 TGDIYIWGWNESGQLALPARSLAEDGKTITGDAPGLNEDGSEAKRATEGEDGGPTPFIAV 293
Score = 87 (35.7 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
G V+ S G H + +G +YTWG G G LGH D
Sbjct: 305 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKD 342
Score = 77 (32.2 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AV+ R T V+ TG +Y +GW +G LG D D+ R + V +S
Sbjct: 308 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQ-VRTVS 366
Query: 437 TGLYHTVV 444
G ++T V
Sbjct: 367 CGPWNTYV 374
Score = 73 (30.8 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DT 466
P +LD + S G HT VVT G L+ +G + QLGH DT
Sbjct: 297 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDT 343
Score = 69 (29.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 268 VGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
+GS V+ + G + VT G +Y++G G LGH + +P ++ F K + V
Sbjct: 304 LGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVR 363
Query: 327 RVSAG--DEHVVALD 339
VS G + +V A++
Sbjct: 364 TVSCGPWNTYVFAVE 378
Score = 57 (25.1 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 135 GSSLCG---VLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDN 190
G CG LG G Q S + P A+ V +VSAS ++ A V + G++ G
Sbjct: 11 GFGFCGFGQALGSG-RGRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRLELSGSV 69
Query: 191 SSFCCGHRD 199
S G RD
Sbjct: 70 SGSAGGCRD 78
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 170 (64.9 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 61/189 (32%), Positives = 85/189 (44%)
Query: 124 LLISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
+L N V SCGS+ G LG HGP +CV I VV ++A HA S
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAGLRHAVAATAS 57
Query: 182 GQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
G VF G + CG R P+F P V L+ V AG + + LT
Sbjct: 58 GIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V+ GSN HGQL + + P P+ I A + V I +G ++++A T G ++++
Sbjct: 117 GEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTW 175
Query: 294 GSGSNFCLG 302
G LG
Sbjct: 176 GRADYGQLG 184
Score = 164 (62.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 68/212 (32%), Positives = 100/212 (47%)
Query: 284 VTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+T NG V S GS S LG HG + + P+AI+ + K VV ++AG H VA +S
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIELHKEK---VVCIAAGLRHAVAATAS 57
Query: 342 GYVYTWGKGY--CGA-LGHGDEIDK--TLPEP--LSSLKSHLAVQVCARKRKTFVLVDTG 394
G V+ WG G CG L G + T EP ++ L++ A+ V A + L D G
Sbjct: 58 GIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----HVSQISTGLYHTVVVTDRG 449
VY +G G L ++ P + + AH V+ I +G H V T+ G
Sbjct: 118 EVYVWGSNKHGQLA------NEAAFLP-VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETG 170
Query: 450 RLFGFGDNERAQLGH--DTLRGC-LEPTEIFI 478
++F +G + QLG +T G LE + F+
Sbjct: 171 KMFTWGRADYGQLGRKLETYEGWKLEKQDSFL 202
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 173 (66.0 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 61/229 (26%), Positives = 108/229 (47%)
Query: 246 GQLGHGDTLDRPTPK-SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLG 302
G L ++ P+ S PL E VVQ+AA + A+ NG VY++G+ + LG
Sbjct: 141 GDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILG 200
Query: 303 HGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-- 358
+ ++Q P + TF + ++V+++ G +H++ LD G V+ WG G LG
Sbjct: 201 FYQDKIKIQKTPWKVPTFSK--YNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVM 258
Query: 359 DEID-KTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
+ KTL P P L+ H+ + + + F L + +G FG G + V D
Sbjct: 259 ERFRLKTLDPRPFG-LR-HVKY-IASGENHCFALTKDNKLVSWGLNQFGQCGVSE-DVED 314
Query: 417 KVL--RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
L +P+ L + I+ G +H+++++ G L+ G + ++G
Sbjct: 315 GALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVG 363
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 69/263 (26%), Positives = 117/263 (44%)
Query: 125 LISNSSVFSCGSSLC--GVLGHGPETTQCVSFTRINFP--SAAHVVQVSASENHAAFVLQ 180
L SN V++ G+ C G+LG + + + T P S ++VQ++ ++H F+ +
Sbjct: 180 LFSNGEVYAWGTFRCNEGILGFYQDKIK-IQKTPWKVPTFSKYNIVQLAPGKDHILFLDE 238
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVP-CKQVTAGLNFTGFLTIRGHVH 238
G VF G+ G + R FR + ++ G+ K + +G N LT +
Sbjct: 239 EGMVFAWGNGQQNQLGRKVMER--FRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLV 296
Query: 239 TCGSNTHGQLGHGDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
+ G N GQ G + ++ PK +A + V + IAAG + L ++ +G +YS G
Sbjct: 297 SWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNV-VIRSIAAGEHHSLILSQDGDLYSCG 355
Query: 295 SGSNFCLG----------HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
F +G + + H + + + T V+AG H VA+ +G
Sbjct: 356 RLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIA 415
Query: 345 YTWGKGYCGALGHGD-EIDKTLP 366
Y+WG G A+G G E D +P
Sbjct: 416 YSWGFGETYAVGLGPFEDDTEVP 438
Score = 155 (59.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 65/279 (23%), Positives = 127/279 (45%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN--THGQLG-HGDTLD-RPTPKSI 262
P L E K V Q+ A N + L G V+ G+ G LG + D + + TP +
Sbjct: 159 PPLAEGHKVV---QLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKV 215
Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
+ ++VQ+A G ++L + G+V+++G+G LG + + + + + R G
Sbjct: 216 PTFSKY-NIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR-KVMERFRLKTLDP-RPFG 272
Query: 323 I-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK----TLPEPLSSLKSHLA 377
+ HV +++G+ H AL + +WG G G ++++ T P+ L+ L ++
Sbjct: 273 LRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLA-LPDNVV 331
Query: 378 VQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA------- 429
++ + A + + +L G +Y G + +G P + + + + RA
Sbjct: 332 IRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKD-VHGKARAVPLPTKL 390
Query: 430 HHVSQ---ISTGLYHTVVVTDRGRLF--GFGDNERAQLG 463
++V + ++ G +H+V V G + GFG+ LG
Sbjct: 391 NNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLG 429
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/241 (23%), Positives = 103/241 (42%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSAS 171
+Q+ G+ H L + VF+ G+ LG E + + F HV +++
Sbjct: 224 VQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF-GLRHVKYIASG 282
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFT 228
ENH + + ++ + G N CG D + +P+ + V + + AG + +
Sbjct: 283 ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHS 342
Query: 229 GFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSI------APL----EEVGSVVQIAAG 277
L+ G +++CG ++G D L T K + PL V +AAG
Sbjct: 343 LILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAG 402
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVV 336
+ +AV NG+ YS+G G + +G G D+ + P I+ + +++ V G + V
Sbjct: 403 SHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCGGQFSV 462
Query: 337 A 337
+
Sbjct: 463 S 463
Score = 91 (37.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 26/103 (25%), Positives = 50/103 (48%)
Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM--GFGSLGFPDRGVSDKVLR-PRIL 424
PL+ + H VQ+ A + L G VY +G G LGF + K+ + P +
Sbjct: 160 PLA--EGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKI--KIQKTPWKV 215
Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
+ +++ Q++ G H + + + G +F +G+ ++ QLG +
Sbjct: 216 PTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVM 258
Score = 84 (34.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 290 VYSFGSGSNFCLGHGE--QHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
++ +G+GS LG G ++ E++ PR R ++ + G H +ALD V++
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 107
Query: 347 WGKGYCGALG 356
WG GALG
Sbjct: 108 WGCNDVGALG 117
Score = 62 (26.9 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 27/97 (27%), Positives = 38/97 (39%)
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC---CGHRDTNRPIFRPRLVEALKGVPC 218
A+H++ H +Q +F C S C G N+ + RPRL L
Sbjct: 26 ASHIINAQEDYKHMYLSVQPLDIF-CWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEA 84
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
K ++ G T L +V + G N G LG DT
Sbjct: 85 KIISFAVGGMHTLALDEESNVWSWGCNDVGALGR-DT 120
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 188 (71.2 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 77/276 (27%), Positives = 126/276 (45%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+ ++ H+A + +G++F CG N + G T + L AL G ++V G
Sbjct: 32 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTE-DVLCFTLCTALSGFCVQEVACG 90
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYML 282
+FT L G V +CGSN GQLG + P P+ I L+E V IAAG + L
Sbjct: 91 WDFTIILGRAGLVLSCGSNAFGQLGVPQ-ISGPCLIPQKIKSLKE--KAVGIAAGLRHAL 147
Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDEL-------QPRAIQTFRRKGIHVVRVSAGDEHV 335
A T +G+V+ +G+G Q L +P I+ G+ + +VS ++
Sbjct: 148 AATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKG--NPGVLLCQVSLS-AYL 204
Query: 336 VALDSSG--YVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV-QVCARKRKTFVLV 391
+L ++G ++Y WG G L E+ P+ + + SH + V +
Sbjct: 205 TSLSTAGEGHLYVWGSNKHGQLV-SKEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQT 263
Query: 392 DTGSVYGFGWMGFGSLG-FPDRGVSDKVLRPRILDS 426
+TG V+ +G +G LG V+D+V++ LDS
Sbjct: 264 ETGKVFTWGRADYGQLGRHAAVYVADRVIK---LDS 296
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 79/287 (27%), Positives = 124/287 (43%)
Query: 196 GHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
GH++ + P+L LK V CK + G + +T G + CG N GQLG
Sbjct: 11 GHKED---VLVPQL---LKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGL 64
Query: 251 GDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
T D L G VQ +A G + + + G+V S GS + LG +
Sbjct: 65 NHTEDVLCFTLCTALS--GFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGP 122
Query: 310 -LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP-- 366
L P+ I++ + K V ++AG H +A SG V+ WG G + KTLP
Sbjct: 123 CLIPQKIKSLKEKA---VGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQ-GKTLPVF 178
Query: 367 ----EPLSSLKSHLAVQVCARKRKTFV--LVDTGSVYGFGWMGFGSLGFPDRGVSDKV-- 418
EP +K + V +C ++ L G + + W G G + VS +V
Sbjct: 179 WAAKEPCE-IKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVW-GSNKHG---QLVSKEVFL 233
Query: 419 LRPRILDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ P+ +D+ H + + +G H V T+ G++F +G + QLG
Sbjct: 234 VEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLG 280
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 67/252 (26%), Positives = 111/252 (44%)
Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ +I+ + +F CG + G LG T + FT S V +V+ +
Sbjct: 35 IAGGGGHSAVITGAGELFVCGHNKAGQLGLN-HTEDVLCFTLCTALSGFCVQEVACGWDF 93
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+ ++G V +CG N+ G + P P+ +++LK + AGL T
Sbjct: 94 TIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKSLKE-KAVGIAAGLRHALAATES 152
Query: 235 GHVHTCGSN--THGQLGH-GDTLDRPTPKSIA-PLEEVGS----VVQIAAGPSYM--LAV 284
G V G+ + + H G TL P + P E G+ + Q++ +Y+ L+
Sbjct: 153 GLVFQWGTGMASRAKRVHQGKTL--PVFWAAKEPCEIKGNPGVLLCQVSLS-AYLTSLST 209
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
G G +Y +GS + L E ++P+ I T + V +G H+VA +G V
Sbjct: 210 AGEGHLYVWGSNKHGQLVSKEVF-LVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKV 268
Query: 345 YTWGKGYCGALG 356
+TWG+ G LG
Sbjct: 269 FTWGRADYGQLG 280
Score = 136 (52.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 53/190 (27%), Positives = 78/190 (41%)
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G+ S LG G + D L P+ ++ K + ++ G H + +G ++ G G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LG D ++L +V T +L G V G FG LG P
Sbjct: 61 QLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ-- 118
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF--GFGDNERAQLGHD--TLR- 468
+S L P+ + SL+ V I+ GL H + T+ G +F G G RA+ H TL
Sbjct: 119 ISGPCLIPQKIKSLKEKAVG-IAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPV 177
Query: 469 --GCLEPTEI 476
EP EI
Sbjct: 178 FWAAKEPCEI 187
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 61/232 (26%), Positives = 90/232 (38%)
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G+N++GQLG G D P+ + + + + IA G + +TG G ++ G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
LG D L G V V+ G + + L +G V + G G LG
Sbjct: 61 QLGLNHTEDVLCFTLCTAL--SGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ 118
Query: 360 EIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
L P+ + SLK AV + A R ++G V F W G G R K
Sbjct: 119 ISGPCLIPQKIKSLKEK-AVGIAAGLRHALAATESGLV--FQW-GTGMASRAKRVHQGKT 174
Query: 419 L-------RPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQL 462
L P + + Q+S Y T + T G L+ +G N+ QL
Sbjct: 175 LPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQL 226
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 190 (71.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 93/365 (25%), Positives = 148/365 (40%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA-AH 164
+ I+ GR HT + S+ S+F+ G++ G LG G P+ + + + F S A
Sbjct: 64 LDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAF 123
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
A L + +++ G N +N P A + +QV+ G
Sbjct: 124 CTAAIAEPRENDGTLSTSRLWVWGQNQG-------SNLPRLFSGAFPATTAI--RQVSCG 174
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPT-----PKSIAPLEEVGSVVQIAA 276
L+ G + G N GQLG G T L P K + E+ ++Q++
Sbjct: 175 TAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSC 234
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHD-ELQPRAIQTFRRKGIHVVRVSAGDE 333
G + A++ G VY++G GS LGH + D EL PR + G+ + V+ G
Sbjct: 235 GEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGL--DGVSMKEVACGGV 292
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEI----------DKTLPE-PLSSLKSHLAVQVCA 382
H AL G +Y WG G G LG G + + L P+ + + + + C
Sbjct: 293 HTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACG 352
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
T V + G + G W G+ S G S P +D V +++ G H+
Sbjct: 353 HSH-TLVYMREGRICG--W-GYNSYGQAANEKSSYAWYPSPVDWC-VGQVRKLAAGGGHS 407
Query: 443 VVVTD 447
V+TD
Sbjct: 408 AVLTD 412
Score = 188 (71.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 75/296 (25%), Positives = 115/296 (38%)
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPR-LVEALKGVPCK------QVTAGLNFTGFLTIRGH 236
++ G N S G + + + P+ L L G P ++ G T + G
Sbjct: 22 IYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASDGS 81
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
+ G+N +GQLG G + R PK + L+ V ++ G A+ S
Sbjct: 82 LFAWGANEYGQLGDGTEVGRKHPKKVKQLQSE-FVKFVSCGAFCTAAIAEPRENDGTLST 140
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
S + Q L PR + +VS G HVVAL G + WG G LG
Sbjct: 141 SRLWVWGQNQGSNL-PRLFSGAFPATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLG 199
Query: 357 HGDEIDKT-LPEPLSSLKSHL--------AVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
G + P +++ L +Q+ + T L D G VY +G G L
Sbjct: 200 RGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQL 259
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
G DK L PR + L + +++ G HT ++ G L+ +G + QLG
Sbjct: 260 GHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLG 315
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 46/153 (30%), Positives = 70/153 (45%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD--EIDKTL-PEPLSSLKSHLAVQ 379
+ ++++S G+ H AL +G VYTWG G G LGH DK L P + L +
Sbjct: 227 VKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKE 286
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGF-PDRG----VSD--KVLRPRILDSLRAHHV 432
V T L G++Y +G G LG P G VS+ ++L + + V
Sbjct: 287 VACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDV 346
Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
++ G HT+V GR+ G+G N Q ++
Sbjct: 347 RLVACGHSHTLVYMREGRICGWGYNSYGQAANE 379
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 57/253 (22%), Positives = 108/253 (42%)
Query: 237 VHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSV-------VQIAAGPSYMLAVTGN 287
++ G N GQ G + L R PK + P E G + I+ G + AV +
Sbjct: 22 IYVWGYNQSGQTGRNEQEKLLR-IPKQLPP-ELFGCPAGANSRWLDISCGREHTAAVASD 79
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA--LDSSGYVY 345
G ++++G+ LG G + P+ ++ + + + V A +A ++ G +
Sbjct: 80 GSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLS 139
Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGF 404
T + + G + + + + A+ QV L + G + +G+
Sbjct: 140 T-SRLWVWGQNQGSNLPRLFS---GAFPATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQ 195
Query: 405 GSLGFPDRGVSDKVLR-PRILDSLRAH--------HVSQISTGLYHTVVVTDRGRLFGFG 455
G LG RGV+ + L+ PR++++ + Q+S G YHT ++D G ++ +G
Sbjct: 196 GQLG---RGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWG 252
Query: 456 DNERAQLGHDTLR 468
QLGH +L+
Sbjct: 253 LGSMGQLGHVSLQ 265
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 189 (71.6 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 66/216 (30%), Positives = 98/216 (45%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF----RPRLVEALKG 215
P V+QVS H+ + VF+ G+NS CG + I+ R ++ G
Sbjct: 171 PQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDG 230
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVVQ 273
QV G + + FLT +G V++CG GQ LGH + PT K L V +V+Q
Sbjct: 231 -QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPT-KLGGDLAGV-NVIQ 287
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GD 332
+A LAV+ +G + FG G++ L D Q + G+ VR +A G
Sbjct: 288 VATYGDCCLAVSADGGL--FGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGG 345
Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPE 367
L+ G+V+ WG Y G LG G ++ +PE
Sbjct: 346 TGCAVLNGEGHVFVWG--Y-GILGKGPNLVESAVPE 378
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 74/268 (27%), Positives = 119/268 (44%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + R++ VVQV+
Sbjct: 177 LQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVA 236
Query: 170 ASENHAAFVLQSGQVFTCG--DNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLN 226
++H+ F+ G+V++CG + GH + T+ P +L L GV QV +
Sbjct: 237 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPT---KLGGDLAGVNVIQVATYGD 293
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
++ G + G++ + QL D+ P+ + VG V Q A G + +
Sbjct: 294 CCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLH-FSGVGKVRQAACGGTGCAVLN 352
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQ------TFRRKGIHVVRVSAGDEHVVAL 338
G G V+ +G G LG G E P I T I V R+ G H AL
Sbjct: 353 GEGHVFVWGYG---ILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAAL 409
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ G ++ WGK G LG G D+ P
Sbjct: 410 TNKGELFVWGKNIRGCLGIGRLEDQYFP 437
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 76/271 (28%), Positives = 117/271 (43%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS- 261
P+ RP+ L QV+ G + LT R V + G+N++GQ G + +S
Sbjct: 167 PLDRPQETRVL------QVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESH 220
Query: 262 -IAPLEEV-GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ +++ G VVQ+A G + L +T G VYS G G++ G G + P +
Sbjct: 221 RVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGG-D 279
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKTLPEPLSSLKSHLAV 378
G++V++V+ + +A+ + G ++ WG Y D +P L
Sbjct: 280 LAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVR 339
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHH----V 432
Q VL G V F W G+G LG V V + P L L + V
Sbjct: 340 QAACGGTGCAVLNGEGHV--FVW-GYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQV 396
Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
S+I GL H +T++G LF +G N R LG
Sbjct: 397 SRIRCGLSHFAALTNKGELFVWGKNIRGCLG 427
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 150 (57.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 44/156 (28%), Positives = 71/156 (45%)
Query: 264 PLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
PL+ GS V +++A SY VT + G L+P A +
Sbjct: 34 PLQTPGSGADVRRVSASWSYTALVTRERPPPALLRPGPRVPGAKAPQPALRPPAPRALAP 93
Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
+ + R+ G EH + LD +G V++WG+G G LGHG + P L +L+ +V
Sbjct: 94 E-LRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEV 152
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
A + + +TG +Y +GW G L P R +++
Sbjct: 153 AAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAE 188
Score = 126 (49.4 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 55/208 (26%), Positives = 84/208 (40%)
Query: 135 GSSLCGVLGHGPET---TQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
G CG G P + Q +S + P S A V +VSAS ++ A V +
Sbjct: 11 GFGFCG-FGQAPGSGRGRQVLSPEPLQTPGSGADVRRVSASWSYTALVTRERPPPALLRP 69
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
G + +P RP AL + +++ G L G V + G HGQLG
Sbjct: 70 GPRVPGAK-APQPALRPPAPRALAPELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLG 128
Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG---SGSNFCLGHGEQ 306
HG P P+ + L+ + V ++AAG + + V+ G +Y +G SG
Sbjct: 129 HGSLEAEPEPRLLEALQGL-PVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLA 187
Query: 307 HD-ELQPRAIQTFRRKGIHVVRVSAGDE 333
D + PR G V R + G++
Sbjct: 188 EDTKTIPREASGLNEDGFEVRRTAKGED 215
Score = 93 (37.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
G VV+ S G H + +G +YTWG G G LGH D
Sbjct: 236 GADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKD 273
Score = 77 (32.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DT 466
P +LD V + S G HT VVT G L+ +G + QLGH DT
Sbjct: 228 PALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDT 274
Score = 74 (31.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 20/67 (29%), Positives = 30/67 (44%)
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
V+ R T V+ TG +Y +GW +G LG D D+ R + V +S
Sbjct: 240 VKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQ-VRAVSC 298
Query: 438 GLYHTVV 444
G ++T V
Sbjct: 299 GPWNTYV 305
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 192 (72.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 54/168 (32%), Positives = 79/168 (47%)
Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
+Q R G +V +++ G H + +G + T+G G G G G D+ P +SSL
Sbjct: 303 VQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLG 362
Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHV 432
+V A T G VY FG FG LG G P++L++ L +V
Sbjct: 363 IRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLG---TGCDQAETLPKLLEAPNLENVNV 419
Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
IS G HT V+TD GR+F +G N+ QLG + P E+ I++
Sbjct: 420 KTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKD 467
Score = 190 (71.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 56/181 (30%), Positives = 85/181 (46%)
Query: 268 VGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
+GS V+ IA G + +T G + +FG G G G DEL P + + GI +
Sbjct: 309 LGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLL--GIRIE 366
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS--LKSHLAVQVCARK 384
V+AG H S G VY +G G LG G + +TLP+ L + L++ +
Sbjct: 367 EVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGA 426
Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
R T V+ D G V+ +GW +G LG D + RI D + I+ G +HT++
Sbjct: 427 RHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKDCFPKN----IACGWWHTLL 482
Query: 445 V 445
+
Sbjct: 483 L 483
Score = 186 (70.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 45/149 (30%), Positives = 73/149 (48%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
K++ G + +T G + T G +GQ G G T D +P ++ L + + ++AAG
Sbjct: 314 KKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGI-RIEEVAAGL 372
Query: 279 SYMLAVTGNGVVYSFGSGSNFC-LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+ + +G VY+FG G+ F LG G E P+ ++ + ++V +S G H
Sbjct: 373 WHTTCASSDGDVYAFG-GNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAV 431
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ G V+ WG G LG GD ID+ P
Sbjct: 432 ITDEGRVFCWGWNKYGQLGIGDVIDRNAP 460
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 51/178 (28%), Positives = 80/178 (44%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
++V +++ H+A + +G + T G CG T+ + P V +L G+ ++V
Sbjct: 311 SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDEL-SPTCVSSLLGIRIEEVA 369
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-AP-LEEVGSVVQIAAGPSY 280
AGL T + G V+ G N GQLG G PK + AP LE V +V I+ G +
Sbjct: 370 AGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENV-NVKTISCGARH 428
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+T G V+ +G LG G+ D P + R K ++ G H + L
Sbjct: 429 TAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEV---RIKDCFPKNIACGWWHTLLL 483
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 41/146 (28%), Positives = 65/146 (44%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ ++ ++ + G L G G G T +S T ++ + +V+A H
Sbjct: 320 GRHSAVITDTGALLTFGWGLYGQCGQG-STDDELSPTCVSSLLGIRIEEVAAGLWHTTCA 378
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFLTIRGH 236
G V+ G N G ++ P+L+EA L+ V K ++ G T +T G
Sbjct: 379 SSDGDVYAFGGNQFGQLG-TGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGR 437
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSI 262
V G N +GQLG GD +DR P +
Sbjct: 438 VFCWGWNKYGQLGIGDVIDRNAPAEV 463
Score = 39 (18.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
N G+L G T TPK EEV S
Sbjct: 2 NGEGKLETGGTSAAATPKEEKEEEEVVS 29
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 143 (55.4 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
++ G EH + LD++G V++WG G G LGHG + P L +L+ + +V A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWH 221
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
+ + +TG +Y +GW G L P R +++
Sbjct: 222 SVCVSETGDIYIWGWNESGQLALPTRNLAE 251
Score = 130 (50.8 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
Q+ G + L + G V+S+G G + LGHG EL+PR ++ + G+ + V+AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQ--GLVMAEVAAGG 219
Query: 333 EHVVALDSSGYVYTWGKGYCGAL 355
H V + +G +Y WG G L
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQL 242
Score = 113 (44.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 31/98 (31%), Positives = 55/98 (56%)
Query: 389 VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
+L+D G V+ +G G LG G + L PR+L++L+ +++++ G +H+V V++
Sbjct: 171 LLLDAAGQVFSWGGGRHGQLG---HGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSE 227
Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTE-IFIQEMEED 484
G ++ +G NE QL T R E E + +E+ ED
Sbjct: 228 TGDIYIWGWNESGQLALPT-RNLAEDGETVAREELNED 264
Score = 100 (40.3 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKS 261
P +RP L L+ +Q+ G L G V + G HGQLGHG TL+ P+
Sbjct: 149 PFYRP-LAPELRA---RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAELEPRL 203
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
+ L+ + + ++AAG + + V+ G +Y +G
Sbjct: 204 LEALQGL-VMAEVAAGGWHSVCVSETGDIYIWG 235
Score = 94 (38.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
Q+ HA + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGH-GTLEAELEPRLLEALQGLVMAEVAAGGW 220
Query: 227 FTGFLTIRGHVHTCGSNTHGQL 248
+ ++ G ++ G N GQL
Sbjct: 221 HSVCVSETGDIYIWGWNESGQL 242
Score = 88 (36.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAP 264
P L++ G + + G T +T G ++T G +GQLGH DT LDRP
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 348
Query: 265 LEEVGSVVQIAAGP--SYMLAV 284
+++ V + GP +Y+ AV
Sbjct: 349 DKQL-QVKAVTCGPWNTYVYAV 369
Score = 87 (35.7 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
G V+ S G H + +G +YTWG G G LGH D
Sbjct: 297 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHED 334
Score = 80 (33.2 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL--RAHHVSQ 434
AV+ R T V+ TG +Y +GW +G LG D D RPR ++ + V
Sbjct: 300 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLD---RPRRVEYFVDKQLQVKA 356
Query: 435 ISTGLYHTVV-VTDRGR 450
++ G ++T V ++G+
Sbjct: 357 VTCGPWNTYVYAVEKGK 373
Score = 76 (31.8 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP--TEIFI 478
P +LD + S G HT VVT G L+ +G + QLGH+ P E F+
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 348
Query: 479 QE 480
+
Sbjct: 349 DK 350
Score = 76 (31.8 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
+P P ++ L V+ + G + VT G +Y++G G LGH + +PR +
Sbjct: 286 QPFP-ALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRV 344
Query: 316 QTFRRKGIHVVRVSAG--DEHVVALD 339
+ F K + V V+ G + +V A++
Sbjct: 345 EYFVDKQLQVKAVTCGPWNTYVYAVE 370
Score = 72 (30.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASE 172
Q+ G H LL+ + VFS G G LGHG T + R+ V+ +V+A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHG--TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 173 NHAAFVLQSGQVFTCGDNSS 192
H+ V ++G ++ G N S
Sbjct: 220 WHSVCVSETGDIYIWGWNES 239
Score = 44 (20.5 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNS 191
+ +VSAS ++ AFV + G++ G S
Sbjct: 41 ICRVSASWSYTAFVTRGGRLELSGSAS 67
Score = 40 (19.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
CG G G + P+P L + +++A SY VT G + GS S
Sbjct: 15 CGFGQELGSGRGRQVHSPSP-----LRAGVDICRVSASWSYTAFVTRGGRLELSGSAS 67
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 143 (55.4 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
++ G EH + LD++G V++WG G G LGHG + P L +L+ + +V A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWH 221
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
+ + +TG +Y +GW G L P R +++
Sbjct: 222 SVCVSETGDIYIWGWNESGQLALPTRNLAE 251
Score = 130 (50.8 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
Q+ G + L + G V+S+G G + LGHG EL+PR ++ + G+ + V+AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQ--GLVMAEVAAGG 219
Query: 333 EHVVALDSSGYVYTWGKGYCGAL 355
H V + +G +Y WG G L
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQL 242
Score = 100 (40.3 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKS 261
P +RP L L+ +Q+ G L G V + G HGQLGHG TL+ P+
Sbjct: 149 PFYRP-LAPELRA---RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAELEPRL 203
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
+ L+ + + ++AAG + + V+ G +Y +G
Sbjct: 204 LEALQGL-VMAEVAAGGWHSVCVSETGDIYIWG 235
Score = 94 (38.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
Q+ HA + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGH-GTLEAELEPRLLEALQGLVMAEVAAGGW 220
Query: 227 FTGFLTIRGHVHTCGSNTHGQL 248
+ ++ G ++ G N GQL
Sbjct: 221 HSVCVSETGDIYIWGWNESGQL 242
Score = 88 (36.0 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAP 264
P L++ G + + G T +T G ++T G +GQLGH DT LDRP
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Query: 265 LEEVGSVVQIAAGP--SYMLAV 284
+++ V + GP +Y+ AV
Sbjct: 351 DKQL-QVKAVTCGPWNTYVYAV 371
Score = 87 (35.7 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
G V+ S G H + +G +YTWG G G LGH D
Sbjct: 299 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHED 336
Score = 80 (33.2 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL--RAHHVSQ 434
AV+ R T V+ TG +Y +GW +G LG D D RPR ++ + V
Sbjct: 302 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLD---RPRRVEYFVDKQLQVKA 358
Query: 435 ISTGLYHTVV-VTDRGR 450
++ G ++T V ++G+
Sbjct: 359 VTCGPWNTYVYAVEKGK 375
Score = 76 (31.8 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP--TEIFI 478
P +LD + S G HT VVT G L+ +G + QLGH+ P E F+
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Query: 479 QE 480
+
Sbjct: 351 DK 352
Score = 76 (31.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
+P P ++ L V+ + G + VT G +Y++G G LGH + +PR +
Sbjct: 288 QPFP-ALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRV 346
Query: 316 QTFRRKGIHVVRVSAG--DEHVVALD 339
+ F K + V V+ G + +V A++
Sbjct: 347 EYFVDKQLQVKAVTCGPWNTYVYAVE 372
Score = 72 (30.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASE 172
Q+ G H LL+ + VFS G G LGHG T + R+ V+ +V+A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHG--TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 173 NHAAFVLQSGQVFTCGDNSS 192
H+ V ++G ++ G N S
Sbjct: 220 WHSVCVSETGDIYIWGWNES 239
Score = 44 (20.5 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNS 191
+ +VSAS ++ AFV + G++ G S
Sbjct: 41 ICRVSASWSYTAFVTRGGRLELSGSAS 67
Score = 40 (19.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
CG G G + P+P L + +++A SY VT G + GS S
Sbjct: 15 CGFGQELGSGRGRQVHSPSP-----LRAGVDICRVSASWSYTAFVTRGGRLELSGSAS 67
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 152 (58.6 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P P PL V Q+ G ++L + G V+S+G+G + LGHG EL+PR ++
Sbjct: 149 PEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE 208
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
+ G+ + +V+AG H V L +G +Y WG G L
Sbjct: 209 ALQ--GLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQL 245
Score = 142 (55.0 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V ++ G EHV+ L ++G V++WG G G LGHG + P L +L+ +V A
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAA 220
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDR-GVSDKVLR 420
+ L +TG +Y +GW G L P R G +K R
Sbjct: 221 GGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAER 259
Score = 106 (42.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 42/157 (26%), Positives = 68/157 (43%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V Q+ H + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGH-GTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIA---AG- 277
+ L+ G ++ G N GQL T ++ + L E G ++A AG
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGA 281
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPR 313
P++ +A+ + GS+ + G +H + R
Sbjct: 282 PAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTR 318
Score = 91 (37.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT- 258
T P F L L+ +Q+ G L G V + G+ HGQLGHG TL+
Sbjct: 148 TPEPPFCQPLAPELR---VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG-TLEAELE 203
Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
P+ + L+ + + ++AAG + + ++ G +Y +G
Sbjct: 204 PRLLEALQGL-RMAKVAAGGWHSVCLSETGDIYIWG 238
Score = 85 (35.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 17/45 (37%), Positives = 20/45 (44%)
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
G V S G H + +G +YTWG G G LGH D P
Sbjct: 300 GSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRP 344
Score = 73 (30.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 21/65 (32%), Positives = 27/65 (41%)
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP--TEIFI 478
P +LD S G HT VVT G L+ +G + QLGH P E F+
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFV 351
Query: 479 QEMEE 483
+ E
Sbjct: 352 ERQLE 356
Score = 73 (30.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL--RAHHVSQ 434
AV R T V+ TG +Y +GW +G LG D S + RP ++ R V
Sbjct: 303 AVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKD---STSLDRPCCVEYFVERQLEVRA 359
Query: 435 ISTGLYHTVV 444
++ G ++T V
Sbjct: 360 VTCGPWNTYV 369
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 161 (61.7 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 58/173 (33%), Positives = 78/173 (45%)
Query: 124 LLISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
+L N V SCGS+ G LG HGP +CV I VV ++A HA S
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAGLRHAVAATAS 57
Query: 182 GQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
G VF G + CG R P+F P V L+ V AG + + LT
Sbjct: 58 GIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTG 286
G V+ GSN HGQL + + P P+ I A + V I +G ++++A TG
Sbjct: 117 GEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTG 168
Score = 145 (56.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 51/153 (33%), Positives = 74/153 (48%)
Query: 231 LTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V +CGSN+ GQLG HG P++I +E VV IAAG + +A T +G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKE--KVVCIAAGLRHAVAATASG 58
Query: 289 VVYSFGSGSNFCLGHGEQHDELQP---RAIQTFRRKGIH---VVRVSAGDEHVVALDSSG 342
+V+ +G+G C G + P A + R G+ + V AG +H +L +G
Sbjct: 59 IVFQWGTGLASC-GRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
VY WG G L + LP P +++H
Sbjct: 118 EVYVWGSNKHGQLANEAAF---LPVP-QKIEAH 146
Score = 129 (50.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/133 (36%), Positives = 66/133 (49%)
Query: 284 VTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+T NG V S GS S LG HG + + P+AI+ + K VV ++AG H VA +S
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIELHKEK---VVCIAAGLRHAVAATAS 57
Query: 342 GYVYTWGKGY--CGA-LGHGDEIDK--TLPEP--LSSLKSHLAVQVCARKRKTFVLVDTG 394
G V+ WG G CG L G + T EP ++ L++ A+ V A + L D G
Sbjct: 58 GIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 395 SVYGFGWMGFGSL 407
VY +G G L
Sbjct: 118 EVYVWGSNKHGQL 130
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 140 (54.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 38/109 (34%), Positives = 58/109 (53%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+S+G G LGHG+ LQP I++ +K VV+++AG H +AL + VY+WG
Sbjct: 522 VWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKK--EVVKITAGANHSLALTAQCQVYSWGS 579
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVY 397
G LG + T+P L+++ + V V A + T +L D G Y
Sbjct: 580 EKFGQLGRMNS-PSTVPN-LTTVSDGIRVWDVAAGQTHTLLLAD-GDCY 625
Score = 131 (51.2 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
T R + VR S + + V++WGKG+ G LGHGD + + P + SL
Sbjct: 495 THRTSNLRAVRASTSESRNLLPSLFTEVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKE 554
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
V++ A + L VY +G FG LG + + L + D +R V ++
Sbjct: 555 VVKITAGANHSLALTAQCQVYSWGSEKFGQLGRMNSPSTVPNLTT-VSDGIR---VWDVA 610
Query: 437 TGLYHTVVVTD 447
G HT+++ D
Sbjct: 611 AGQTHTLLLAD 621
Score = 111 (44.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 45/180 (25%), Positives = 80/180 (44%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+ + H +++ GQV++ G+ + P L L G V+AG
Sbjct: 34 VLHAALGSLHGLLLIEGGQVYSFGEQP-----WKPVEPPPASLVLESTLSGQHVISVSAG 88
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG-HG-DTLDRPTPKSIAPLE----EVGSVVQIAAGP 278
+T G V G N++GQ G G D + PTP ++ E ++ V+ +A G
Sbjct: 89 SYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGA 148
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA++ V+++GSG L +P+ ++ G +VV+++ G H +AL
Sbjct: 149 QHTLALSNKHEVWAWGSGCQLGLVTNV-FPVWKPQKVEHL--VGRYVVQIACGAFHSLAL 205
Score = 86 (35.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 54/176 (30%), Positives = 72/176 (40%)
Query: 119 GRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
G H LLI V+S G + P + + T S HV+ VSA H +
Sbjct: 40 GSLHGLLLIEGGQVYSFGEQPWKPV-EPPPASLVLESTL----SGQHVISVSAGSYHCSA 94
Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCK-----QVTAGLNFTGFL 231
V + G V G+NS CG T+R P P V + P + V G T L
Sbjct: 95 VTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTLAL 154
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGS-VVQIAAGPSYMLAV 284
+ + V GS QLG + P P+ + L VG VVQIA G + LA+
Sbjct: 155 SNKHEVWAWGSGC--QLGLVTNVF-PVWKPQKVEHL--VGRYVVQIACGAFHSLAL 205
Score = 64 (27.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWM-GFGSLGFPDRGVSD 416
++ D+ P+S +H + A + T + S++ W G G G G
Sbjct: 480 EDTDRNSFSPVSPSDTHRTSNLRAVRASTSESRNLLPSLFTEVWSWGKGHEGQLGHGDYL 539
Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
L+P + SL V +I+ G H++ +T + +++ +G + QLG
Sbjct: 540 PRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFGQLG 586
Score = 47 (21.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+ + G HTL +SN V++ GS C LG ++ +VVQ++
Sbjct: 142 LNVACGAQHTLALSNKHEVWAWGSG-CQ-LGLVTNVFPVWKPQKVEHLVGRYVVQIACGA 199
Query: 173 NHAAFVLQ 180
H+ ++Q
Sbjct: 200 FHSLALVQ 207
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 158 (60.7 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 47/134 (35%), Positives = 66/134 (49%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
V+ +AG + LA +G +YS+G G N LG G +P+ I+ R K ++ V A
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNK--RILYVCA 498
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTF- 388
G H +DS+ VYTWG G LGHG D+ID P+ + L + +VC F
Sbjct: 499 GTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNK--KVCMLSFGCFN 556
Query: 389 --VLVDTGSVYGFG 400
L G VY +G
Sbjct: 557 SLALNVKGDVYVWG 570
Score = 131 (51.2 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 35/143 (24%), Positives = 74/143 (51%)
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
+I+ ++K + V+ SAG +H +A + G +Y+WG G G LG G+ P+ + L+
Sbjct: 431 SIKWDKKKNV-VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLR 489
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH-V 432
+ + VCA + + +VY +G F LG + + + P++++ L + V
Sbjct: 490 NKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDID--IYYPKLVECLNHNKKV 547
Query: 433 SQISTGLYHTVVVTDRGRLFGFG 455
+S G ++++ + +G ++ +G
Sbjct: 548 CMLSFGCFNSLALNVKGDVYVWG 570
Score = 127 (49.8 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 35/128 (27%), Positives = 61/128 (47%)
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
+AG + + G +++ G +G+LG G+ P+ I L ++ + AG S+
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNK-RILYVCAGTSHS 503
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+ N VY++G+G + LGHG D P+ ++ V +S G + +AL+
Sbjct: 504 GCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNK-KVCMLSFGCFNSLALNV 562
Query: 341 SGYVYTWG 348
G VY WG
Sbjct: 563 KGDVYVWG 570
Score = 110 (43.8 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 37/147 (25%), Positives = 75/147 (51%)
Query: 332 DEHV--VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
++H+ V L+++ YT+ G+ HG+ +K LKS + + + +
Sbjct: 715 NKHIDNVTLNNNDNYYTYDN-INGS--HGNIFEKNK----LVLKSKVKI-IDGSDHFSVF 766
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
L+++G VY G+ G LG + + K P IL ++ + + +I+ G + + V+D G
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVP-ILLNICVNKIIKIACGYNYVLCVSDVG 825
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++G+G N+++QLG ++ EP +
Sbjct: 826 LVYGWGKNDKSQLGIGVIKDFYEPVHV 852
Score = 96 (38.9 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 306 QHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
+HD P ++ F +K + +S GD H +A+ + G +Y+WG G +G+G +
Sbjct: 331 KHDWFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVY 390
Query: 365 LPEPLSSLKSH 375
P P+ L+ H
Sbjct: 391 EPTPIF-LEPH 400
Score = 78 (32.5 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 19/92 (20%), Positives = 41/92 (44%)
Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
K ++ + A + + G +Y +G+ G G LG G +P+++ LR +
Sbjct: 437 KKNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGL---GNIKSYNKPQLIKGLRNKRI 493
Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
+ G H+ + ++ +G+ + +LGH
Sbjct: 494 LYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGH 525
Score = 77 (32.2 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 47/193 (24%), Positives = 85/193 (44%)
Query: 117 TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASE 172
+ G H+L + + ++S G G LG G S+ + I ++ V A
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLG----NIKSYNKPQLIKGLRNKRILYVCAGT 500
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 230
+H+ + + V+T G+ + GH + + I+ P+LVE L K+V L+F F
Sbjct: 501 SHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHN--KKVCM-LSFGCFNS 557
Query: 231 --LTIRGHVHTCGS-N-THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
L ++G V+ G+ N T+ + + + + PK I + + I A +T
Sbjct: 558 LALNVKGDVYVWGTFNITNNYVNY--YISK-LPKQINTNYKC---ISIHASTYVCFGITL 611
Query: 287 NGVVYSFGSGSNF 299
G + SFG+ N+
Sbjct: 612 VGDLISFGNYKNY 624
Score = 75 (31.5 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
P P I ++ + I+ G + LA+ GV+YS+G + C+G+G + +P I
Sbjct: 337 PFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 68 (29.0 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 28/138 (20%), Positives = 57/138 (41%)
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDK---TLPEPLSSLKSHLAVQVCARKRK-TFVLVDTG 394
D G +Y WG G +G G + + LP ++ + + C+ + L +T
Sbjct: 902 DECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINK---IYKCSLGNSHSLFLTNTN 958
Query: 395 SVYGFGWMGFGSLGFPDRG--VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
+Y G G LG ++ V + V P + ++ I G ++++++ G ++
Sbjct: 959 ELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDGFIY 1018
Query: 453 GFGDNERAQLGHDTLRGC 470
FG+ + G+ C
Sbjct: 1019 IFGEFIKGSNGNSNNMSC 1036
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 27/97 (27%), Positives = 43/97 (44%)
Query: 237 VHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV---V 290
+ T G N+ QLG G ++ PT V S+ ++ N + V
Sbjct: 41 IFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSV 100
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
YSFG G+N LG+ ++ EL P ++ +K I V+
Sbjct: 101 YSFGKGNNGLLGYKKKR-EL-PNFLEHEEKKNIQKVK 135
Score = 57 (25.1 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 156 RINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
+I FP ++ +S + H + G +++ G N+ C G+ TN+ ++ P
Sbjct: 341 KIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGN-GTNQNVYEP 392
Score = 52 (23.4 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 115 QITTGRYHTLLIS---NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
+I+TG H ++ N S+F+ G + C LG G + T + F + V +
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICC 80
Query: 171 SENHAAFVLQSGQVFTCG 188
+ N+A FVL V G
Sbjct: 81 T-NYATFVLVKKNVNDIG 97
Score = 50 (22.7 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTPKSI 262
F ++V K K ++ G T + G +++ G N G +G+G + PTP +
Sbjct: 338 FPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPIFL 397
Query: 263 AP 264
P
Sbjct: 398 EP 399
Score = 48 (22.0 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
Identities = 19/89 (21%), Positives = 36/89 (40%)
Query: 167 QVSASENH---AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
++S +H A+ +FT G NS G NR + P +V +
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICC 80
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
N+ F+ ++ +V+ G + + G G+
Sbjct: 81 -TNYATFVLVKKNVNDIGCSVYS-FGKGN 107
Score = 37 (18.1 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 451 LFGFGDNERAQLGHDTLRGC-LEPTEIFI 478
++G ++ + LG D +GC L P +I I
Sbjct: 909 IWGNAESGKVGLGVDYTQGCILLPRKINI 937
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 158 (60.7 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 47/134 (35%), Positives = 66/134 (49%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
V+ +AG + LA +G +YS+G G N LG G +P+ I+ R K ++ V A
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNK--RILYVCA 498
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTF- 388
G H +DS+ VYTWG G LGHG D+ID P+ + L + +VC F
Sbjct: 499 GTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNK--KVCMLSFGCFN 556
Query: 389 --VLVDTGSVYGFG 400
L G VY +G
Sbjct: 557 SLALNVKGDVYVWG 570
Score = 131 (51.2 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 35/143 (24%), Positives = 74/143 (51%)
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
+I+ ++K + V+ SAG +H +A + G +Y+WG G G LG G+ P+ + L+
Sbjct: 431 SIKWDKKKNV-VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLR 489
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH-V 432
+ + VCA + + +VY +G F LG + + + P++++ L + V
Sbjct: 490 NKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDID--IYYPKLVECLNHNKKV 547
Query: 433 SQISTGLYHTVVVTDRGRLFGFG 455
+S G ++++ + +G ++ +G
Sbjct: 548 CMLSFGCFNSLALNVKGDVYVWG 570
Score = 127 (49.8 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 35/128 (27%), Positives = 61/128 (47%)
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
+AG + + G +++ G +G+LG G+ P+ I L ++ + AG S+
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNK-RILYVCAGTSHS 503
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+ N VY++G+G + LGHG D P+ ++ V +S G + +AL+
Sbjct: 504 GCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNK-KVCMLSFGCFNSLALNV 562
Query: 341 SGYVYTWG 348
G VY WG
Sbjct: 563 KGDVYVWG 570
Score = 110 (43.8 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 37/147 (25%), Positives = 75/147 (51%)
Query: 332 DEHV--VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
++H+ V L+++ YT+ G+ HG+ +K LKS + + + +
Sbjct: 715 NKHIDNVTLNNNDNYYTYDN-INGS--HGNIFEKNK----LVLKSKVKI-IDGSDHFSVF 766
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
L+++G VY G+ G LG + + K P IL ++ + + +I+ G + + V+D G
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVP-ILLNICVNKIIKIACGYNYVLCVSDVG 825
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++G+G N+++QLG ++ EP +
Sbjct: 826 LVYGWGKNDKSQLGIGVIKDFYEPVHV 852
Score = 96 (38.9 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 306 QHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
+HD P ++ F +K + +S GD H +A+ + G +Y+WG G +G+G +
Sbjct: 331 KHDWFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVY 390
Query: 365 LPEPLSSLKSH 375
P P+ L+ H
Sbjct: 391 EPTPIF-LEPH 400
Score = 78 (32.5 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 19/92 (20%), Positives = 41/92 (44%)
Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
K ++ + A + + G +Y +G+ G G LG G +P+++ LR +
Sbjct: 437 KKNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGL---GNIKSYNKPQLIKGLRNKRI 493
Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
+ G H+ + ++ +G+ + +LGH
Sbjct: 494 LYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGH 525
Score = 77 (32.2 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 47/193 (24%), Positives = 85/193 (44%)
Query: 117 TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASE 172
+ G H+L + + ++S G G LG G S+ + I ++ V A
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLG----NIKSYNKPQLIKGLRNKRILYVCAGT 500
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 230
+H+ + + V+T G+ + GH + + I+ P+LVE L K+V L+F F
Sbjct: 501 SHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHN--KKVCM-LSFGCFNS 557
Query: 231 --LTIRGHVHTCGS-N-THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
L ++G V+ G+ N T+ + + + + PK I + + I A +T
Sbjct: 558 LALNVKGDVYVWGTFNITNNYVNY--YISK-LPKQINTNYKC---ISIHASTYVCFGITL 611
Query: 287 NGVVYSFGSGSNF 299
G + SFG+ N+
Sbjct: 612 VGDLISFGNYKNY 624
Score = 75 (31.5 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
P P I ++ + I+ G + LA+ GV+YS+G + C+G+G + +P I
Sbjct: 337 PFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 68 (29.0 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 28/138 (20%), Positives = 57/138 (41%)
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDK---TLPEPLSSLKSHLAVQVCARKRK-TFVLVDTG 394
D G +Y WG G +G G + + LP ++ + + C+ + L +T
Sbjct: 902 DECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINK---IYKCSLGNSHSLFLTNTN 958
Query: 395 SVYGFGWMGFGSLGFPDRG--VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
+Y G G LG ++ V + V P + ++ I G ++++++ G ++
Sbjct: 959 ELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDGFIY 1018
Query: 453 GFGDNERAQLGHDTLRGC 470
FG+ + G+ C
Sbjct: 1019 IFGEFIKGSNGNSNNMSC 1036
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 27/97 (27%), Positives = 43/97 (44%)
Query: 237 VHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV---V 290
+ T G N+ QLG G ++ PT V S+ ++ N + V
Sbjct: 41 IFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSV 100
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
YSFG G+N LG+ ++ EL P ++ +K I V+
Sbjct: 101 YSFGKGNNGLLGYKKKR-EL-PNFLEHEEKKNIQKVK 135
Score = 57 (25.1 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 156 RINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
+I FP ++ +S + H + G +++ G N+ C G+ TN+ ++ P
Sbjct: 341 KIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGN-GTNQNVYEP 392
Score = 52 (23.4 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 115 QITTGRYHTLLIS---NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
+I+TG H ++ N S+F+ G + C LG G + T + F + V +
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICC 80
Query: 171 SENHAAFVLQSGQVFTCG 188
+ N+A FVL V G
Sbjct: 81 T-NYATFVLVKKNVNDIG 97
Score = 50 (22.7 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTPKSI 262
F ++V K K ++ G T + G +++ G N G +G+G + PTP +
Sbjct: 338 FPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPIFL 397
Query: 263 AP 264
P
Sbjct: 398 EP 399
Score = 48 (22.0 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
Identities = 19/89 (21%), Positives = 36/89 (40%)
Query: 167 QVSASENH---AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
++S +H A+ +FT G NS G NR + P +V +
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICC 80
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
N+ F+ ++ +V+ G + + G G+
Sbjct: 81 -TNYATFVLVKKNVNDIGCSVYS-FGKGN 107
Score = 37 (18.1 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 451 LFGFGDNERAQLGHDTLRGC-LEPTEIFI 478
++G ++ + LG D +GC L P +I I
Sbjct: 909 IWGNAESGKVGLGVDYTQGCILLPRKINI 937
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 159 (61.0 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 47/159 (29%), Positives = 74/159 (46%)
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G V+ G N GQLG GDT +R I+ + Q++AG + A+T G +Y+FG
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 295 SGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
+ LG + + P+ + K V++V+ G H V L VYT+G G
Sbjct: 63 EPESGKLGLPPKLLVNHKVPQLVPGISEK---VIQVACGGGHTVVLTEKA-VYTFGLGQF 118
Query: 353 GALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
G LG G + + P+ + S+K VC + T ++
Sbjct: 119 GQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 147 (56.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 45/163 (27%), Positives = 79/163 (48%)
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
G G VY+ G + LG G+ DE + +F + ++SAG AL + G +Y
Sbjct: 1 GGGQVYATGGNNEGQLGLGDT-DERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELY 59
Query: 346 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
T+G+ G LG + ++ +P+ + + S +QV T VL + +VY FG
Sbjct: 60 TFGEPESGKLGLPPKLLVNHKVPQLVPGI-SEKVIQVACGGGHTVVLTEK-AVYTFGLGQ 117
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
FG LG + + P++++S++ +S + G HT ++T
Sbjct: 118 FGQLGLGT--FTFETSEPKVIESVKDKKISHVCCGENHTALIT 158
Score = 136 (52.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 47/162 (29%), Positives = 75/162 (46%)
Query: 182 GQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGV-PCKQVTAGLNFTGFLTIRGHVHT 239
GQV+ G N+ G DT+ R F L+ KQ++AG N + LT G ++T
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFH--LISFFTSQHKIKQLSAGSNTSAALTAEGELYT 60
Query: 240 CGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
G G+LG L + P+ + + E V+Q+A G + + +T V Y+FG G
Sbjct: 61 FGEPESGKLGLPPKLLVNHKVPQLVPGISE--KVIQVACGGGHTVVLTEKAV-YTFGLGQ 117
Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
LG G + +P+ I++ + K I V G+ H +
Sbjct: 118 FGQLGLGTFTFETSEPKVIESVKDKKIS--HVCCGENHTALI 157
Score = 124 (48.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 45/145 (31%), Positives = 70/145 (48%)
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFG 400
G VY G G LG GD +++ +S S H Q+ A + L G +Y FG
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 401 WMGFGSLGFPDRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
G LG P + V+ KV P+++ + + V Q++ G HTVV+T++ ++ FG +
Sbjct: 63 EPESGKLGLPPKLLVNHKV--PQLVPGI-SEKVIQVACGGGHTVVLTEKA-VYTFGLGQF 118
Query: 460 AQLGHDTLRGCLEPTEIFIQEMEED 484
QLG T E +E + E +D
Sbjct: 119 GQLGLGTFT--FETSEPKVIESVKD 141
Score = 115 (45.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 43/159 (27%), Positives = 78/159 (49%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 189
V++ G + G LG G +T + +F I+F ++ H + Q+SA N +A + G+++T G+
Sbjct: 5 VYATGGNNEGQLGLG-DTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGE 63
Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
S G + + ++ + + G+ K QV G T LT + V+T G GQ
Sbjct: 64 PESGKLGLPP--KLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQ 120
Query: 248 LGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
LG G T + PK I +++ + + G ++ +T
Sbjct: 121 LGLGTFTFETSEPKVIESVKDK-KISHVCCGENHTALIT 158
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 179 (68.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 71/267 (26%), Positives = 119/267 (44%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHVVQ 167
+Q++ GR H+L++++S VF+ G++ G G + S + + +F S VVQ
Sbjct: 168 LQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDS--RVVQ 225
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
V ++H+ F + G VF CG + G N +L + GV QV++ +
Sbjct: 226 VVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIVQVSSYGDC 285
Query: 228 TGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
++ G + G++ + QL +T P+ + P + +G + + A G + + +T
Sbjct: 286 CLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHL-PFK-IGKIKEAACGGTGNIVLTE 343
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQ-PRAI--QTFR----RKGIHVVRVSAGDEHVVALD 339
G V+ +G G LG G E P I F + V RV G H AL
Sbjct: 344 EGAVFVWGYG---ILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALT 400
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ G ++ WGK G LG G D+ P
Sbjct: 401 NRGELFVWGKNLRGCLGIGRMEDQYFP 427
Score = 171 (65.3 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 67/253 (26%), Positives = 111/253 (43%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS--IAPLEEVGS-VVQIAA 276
QV+ G + LT V T G+N++GQ G D +S I L + S VVQ+
Sbjct: 169 QVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQVVC 228
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G + L T G V++ G G++ G G + P + G+++V+VS+ + +
Sbjct: 229 GQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGG-DIAGVNIVQVSSYGDCCL 287
Query: 337 ALDSSGYVYTWGKG-YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
A+ G ++ WG Y + +P L + C VL + G+
Sbjct: 288 AVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIKEAACGGTGN-IVLTEEGA 346
Query: 396 VY--GFGWMGFGSLGFPDRGVSDKVLRPRIL---DSLRAHHVSQISTGLYHTVVVTDRGR 450
V+ G+G +G G + V + ++ P + D V+++ GL H +T+RG
Sbjct: 347 VFVWGYGILGKGP-NLTETAVPE-MIPPSLFGWSDFSSDVRVARVRCGLSHFAALTNRGE 404
Query: 451 LFGFGDNERAQLG 463
LF +G N R LG
Sbjct: 405 LFVWGKNLRGCLG 417
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 62/215 (28%), Positives = 96/215 (44%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPC 218
P V+QVS H+ + S VFT G+NS CG + I+ L+ L
Sbjct: 162 PQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDS 221
Query: 219 K--QVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVVQI 274
+ QV G + + F T +G V CG GQ LGH + PT K + V ++VQ+
Sbjct: 222 RVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPT-KLGGDIAGV-NIVQV 279
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDE 333
++ LAV+ G ++ +G+ L + ++ PR + F+ I + G
Sbjct: 280 SSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLP-FKIGKIK--EAACGGT 336
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPE 367
+ L G V+ WG Y G LG G + +T +PE
Sbjct: 337 GNIVLTEEGAVFVWG--Y-GILGKGPNLTETAVPE 368
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 41/147 (27%), Positives = 66/147 (44%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGK---GYCGALGHGDEI--DKTLPEPLSSLKSHLAVQ 379
V++VS G H + L S V+T G G CG DEI + L L+ S +
Sbjct: 167 VLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQV 226
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
VC + F G+V+ GW G G ++ + ++ + ++ Q+S+
Sbjct: 227 VCGQDHSLF-RTKKGAVFACGWGADGQTGLGHYNITS--VPTKLGGDIAGVNIVQVSSYG 283
Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDT 466
+ V+D G LFG+G++E QL T
Sbjct: 284 DCCLAVSDEGDLFGWGNSEYLQLASVT 310
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 145 (56.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
R+ G EH + LD++G V++WG G G LGHG + P L +L+ +V A
Sbjct: 163 RLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWH 222
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
+ L +TG +Y +GW G L P + +++
Sbjct: 223 SVCLSETGDIYIWGWNESGQLALPTKSLAE 252
Score = 135 (52.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P P PL ++ G + L + G V+S+G+G + LGHG E +PR ++
Sbjct: 147 PRPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLE 206
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
+ G+ + V+AG H V L +G +Y WG G L
Sbjct: 207 ALQ--GLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQL 243
Score = 105 (42.0 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
P +RP L L+ +++ G L G V + G+ HGQLGHG P P+ +
Sbjct: 150 PFYRP-LAPTLRA---RRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLL 205
Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
L+ + + ++AAG + + ++ G +Y +G
Sbjct: 206 EALQGL-RMAEVAAGGWHSVCLSETGDIYIWG 236
Score = 97 (39.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 21/47 (44%), Positives = 24/47 (51%)
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
G V+VS G H L +G +YTWG G G LGH D TL P
Sbjct: 300 GSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTT--TLDRP 344
Score = 96 (38.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAP 264
P L++ G +V+ G T LT G ++T G +GQLGH DT LDRP
Sbjct: 292 PALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFV 351
Query: 265 LEEVGSVVQIAAGP--SYMLAV 284
+++ V ++ GP +Y+ AV
Sbjct: 352 DKQL-QVRTVSCGPWNTYVYAV 372
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 46/150 (30%), Positives = 68/150 (45%)
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
HA + +GQVF+ G GH T PRL+EAL+G+ +V AG + L+
Sbjct: 170 HALLLDAAGQVFSWGAGRHGQLGH-GTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSE 228
Query: 234 RGHVHTCGSNTHGQLG-HGDTL--D-RPTPKSIAPLEEVGSVVQI-AAG----PSYMLAV 284
G ++ G N GQL +L D + T + LEE GS V+ +AG P+ +AV
Sbjct: 229 TGDIYIWGWNESGQLALPTKSLAEDGKTTAGEASGLEEDGSEVKRGSAGEDGAPAPFIAV 288
Query: 285 TGNGVVYSFGSGSNFC-LGHGEQHDELQPR 313
+ GS + G +H + R
Sbjct: 289 QPFPALLDLSPGSEAVKVSCGSRHTAVLTR 318
Score = 86 (35.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AV+V R T VL TG +Y +GW +G LG D D+ R + V +S
Sbjct: 303 AVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQ-VRTVS 361
Query: 437 TGLYHTVV 444
G ++T V
Sbjct: 362 CGPWNTYV 369
Score = 76 (31.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DT 466
P +LD ++S G HT V+T G L+ +G + QLGH DT
Sbjct: 292 PALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDT 338
Score = 70 (29.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASE 172
++ G H LL+ + VFS G+ G LGHG T + R+ + +V+A
Sbjct: 163 RLELGAEHALLLDAAGQVFSWGAGRHGQLGHG--TLEAEPEPRLLEALQGLRMAEVAAGG 220
Query: 173 NHAAFVLQSGQVFTCGDNSS 192
H+ + ++G ++ G N S
Sbjct: 221 WHSVCLSETGDIYIWGWNES 240
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 88/340 (25%), Positives = 133/340 (39%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPC 218
+A V QVSAS ++ A V + G+V G S G RD + + + ++ G
Sbjct: 38 AADDVCQVSASWSYTALVTRGGRVELSGSVSCAADGCRDVWASEGLLVVQRNKSGSGTEL 97
Query: 219 KQVTAGLNFTG----FLTIRGHVHTCGSNTHGQLGHGDTLD---------RPTPKSIAPL 265
+ G G + G + G TL P P PL
Sbjct: 98 QAWVPGSALQGEPLWVQNLASGAKAQGEDEPGSEPRMGTLPLLPCARAYMTPQPPFCQPL 157
Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
V Q+ G + L + G V+S+G G + LGHG EL+PR ++ + G+ +
Sbjct: 158 APELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQ--GLRM 215
Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
V+AG H V + +G +Y WG G L LP + K + R+
Sbjct: 216 AEVAAGGWHSVCVSETGDIYIWGWNESGQLA--------LPTRSGTEKKTV------REE 261
Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
T L D G + G +G P ++ + P +LD + S G HT VV
Sbjct: 262 AT-ELNDDG-LRGEE-AALADVGAPAHFIAIQPF-PALLDLPLGSDAVKASCGSRHTAVV 317
Query: 446 TDRGRLFGFGDNERAQLGHDTLRGCLEP--TEIFIQEMEE 483
T G L+ +G + QLGH +P E F++ E
Sbjct: 318 TRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLE 357
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 149 (57.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 50/180 (27%), Positives = 83/180 (46%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q + H +++ GQV++ G+ + + PI L E + V V AG
Sbjct: 40 VLQAALGARHGVLLVEGGQVYSFGE-LPWKQNQTSSAEPILEAVLSEQ-RVV---FVAAG 94
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGH-G-DTLDRPTPKSIAPLE----EVGSVVQIAAGP 278
+G +T G VH G N HGQ G G + PTP + E + ++++A G
Sbjct: 95 SAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGD 154
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA++ V+++GSG L + +P+ + G HV++V+ G H VAL
Sbjct: 155 QHTLALSAKHEVWAWGSGCQLGL-NTSTFPVWKPQKVDHL--SGRHVLQVACGSAHSVAL 211
Score = 140 (54.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 39/144 (27%), Positives = 70/144 (48%)
Query: 309 ELQPRAIQTFRRKGIHVVRVSAG-----DEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
++ PR ++ R + V +++G D H+ +L + V++WG+G G LGHGD + +
Sbjct: 513 QVSPRLLRRTSRPRMRAVPLASGGIPETDAHLPSLQTE--VWSWGQGQDGQLGHGDLLPR 570
Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
P+ + SL ++V A + L V+ +G G LG + + L ++
Sbjct: 571 LQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLGHMESPTTFPQLT-KL 629
Query: 424 LDSLRAHHVSQISTGLYHTVVVTD 447
D +R V I GL HT+++ D
Sbjct: 630 SDGIR---VWDIGAGLQHTLLLAD 650
Score = 132 (51.5 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 48/142 (33%), Positives = 69/142 (48%)
Query: 198 RDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
R T+RP R R V A G+P + A L +++ V + G GQLGHGD L R
Sbjct: 520 RRTSRP--RMRAVPLASGGIP--ETDAHLP-----SLQTEVWSWGQGQDGQLGHGDLLPR 570
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P + L V+++AAG + LA+T V+S+G ++ LGH E P+
Sbjct: 571 LQPDCVKSLNGK-EVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLGHMESPTTF-PQL-- 626
Query: 317 TFRRKGIHVVRVSAGDEHVVAL 338
T GI V + AG +H + L
Sbjct: 627 TKLSDGIRVWDIGAGLQHTLLL 648
Score = 86 (35.3 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
V+ +G G LG D + + L+P + SL V +++ G +H++ +T + ++F +G
Sbjct: 551 VWSWGQGQDGQLGHGD--LLPR-LQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWG 607
Query: 456 DNERAQLGH 464
N QLGH
Sbjct: 608 CNTSGQLGH 616
Score = 59 (25.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G HTL +S V++ GS C LG T +++ S HV+QV+
Sbjct: 148 LEVACGDQHTLALSAKHEVWAWGSG-CQ-LGLNTSTFPVWKPQKVDHLSGRHVLQVACGS 205
Query: 173 NHAAFVLQ 180
H+ +++
Sbjct: 206 AHSVALVR 213
Score = 43 (20.2 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTV--VVTDRGRLFGFGDNERAQLGHDTLRGCL 471
VS ++LR +RA V S G+ T + + + ++ +G + QLGH L L
Sbjct: 514 VSPRLLRRTSRPRMRA--VPLASGGIPETDAHLPSLQTEVWSWGQGQDGQLGHGDLLPRL 571
Query: 472 EP 473
+P
Sbjct: 572 QP 573
Score = 40 (19.1 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 422 RILDSLRA--HHVSQISTGLYHTV 443
+ L+SL HV ++ +YHT+
Sbjct: 1374 KTLESLECIPQHVGPVTLEVYHTI 1397
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 161 (61.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 61/259 (23%), Positives = 110/259 (42%)
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
++T G G H P+P S+ L + ++ Q++ GP++ A+ N + +G
Sbjct: 4 LYTWGKGKTGNTCHNIDKKYPSPPSV--LISL-NLDQLSMGPNHSAAIVNNECLM-WGEV 59
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
G +H L + + ++R+ VV VS G H + L S +++ G G LG
Sbjct: 60 M------GRKHTTLF-KIV--WKRR---VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLG 107
Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS- 415
+ +D +P P+ +L +++ A + + + G +Y +G +G LG
Sbjct: 108 IENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKL 167
Query: 416 -----DKVLRPRILDSLRAHHVSQ------ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
+L P I D+ + + Q I G HT+ ++ G +F +G N+ QLG
Sbjct: 168 HSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGL 227
Query: 465 DTLRGCLEPTEIFIQEMEE 483
L P I + E
Sbjct: 228 GHCNAKLVPVPIHLDNSFE 246
Score = 143 (55.4 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 226 NF-TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
NF + LT+ G + GSN +GQLG GD+LD+ PK++ E + ++A G ++ + +
Sbjct: 279 NFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILL 338
Query: 285 TGNGVVYSFGSGSNFCLGHG 304
T V++FGS + LGHG
Sbjct: 339 TKEQDVFTFGSNEFYQLGHG 358
Score = 119 (46.9 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 55/212 (25%), Positives = 90/212 (42%)
Query: 115 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
Q++ G H+ I N+ G V+G T + + R VV VS NH
Sbjct: 37 QLSMGPNHSAAIVNNECLMWGE----VMGRKHTTLFKIVWKR-------RVVSVSCGFNH 85
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+ ++F+ G N + G + P V+ L ++ AG N + +T
Sbjct: 86 TLLLTSEYKIFSMGFNQTGQLGIENVVDSAV-PLPVDTLSKFNVIKIKAGNNVSAAITEA 144
Query: 235 GHVHTCGSNTHGQLGHGDT---LDRPTPKSIA-PL----EEVGSVVQ------IAAGPSY 280
G ++ GS+ +GQLG+G L TP +I PL E+ + Q I G +
Sbjct: 145 GDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQH 204
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
+A++ G ++S+GS LG G + +L P
Sbjct: 205 TIAISTTGAIFSWGSNQYGQLGLGHCNAKLVP 236
Score = 117 (46.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 31/118 (26%), Positives = 57/118 (48%)
Query: 318 FRRKGIH--VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
F K IH VV ++ G+ H L G ++ WG G LG GD +D+++P+ +
Sbjct: 263 FTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEF 322
Query: 376 LAV-QVCARKRKTFVLVDTGSVYGFG-----WMGFGSLGFPDR-GVSDKVLRPRILDS 426
+ + ++ T +L V+ FG +G GS+G +R ++ +P+++ S
Sbjct: 323 VKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKPKVMAS 380
Score = 101 (40.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 28/115 (24%), Positives = 56/115 (48%)
Query: 356 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
GH + + + + ++ H + V + + +L G ++ +G +G LG D
Sbjct: 250 GHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDS-- 307
Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
D+ + + SL +++++ G HT+++T +F FG NE QLGH ++ G
Sbjct: 308 LDQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGG 362
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 162 (62.1 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 58/182 (31%), Positives = 85/182 (46%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+ ++ H+A + +G++F CG N + G T + L AL G ++V G
Sbjct: 52 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTE-DVLCFTLCTALSGFCVQEVACG 110
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAP-LEEVGSVVQIAAGPSYM 281
+FT L G V +CGSN GQLG + P P+ I L+E V IAAG +
Sbjct: 111 WDFTIILGRAGLVLSCGSNAFGQLGVPQ-ISGPCLIPQKIKQSLKE--KAVGIAAGLRHA 167
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQP--RAIQTFRRKGIH---VVRVSAGDEHVV 336
LA T +G+V+ +G+G Q L A + KG+ V RV+AG H V
Sbjct: 168 LAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCV 227
Query: 337 AL 338
+L
Sbjct: 228 SL 229
Score = 132 (51.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 54/191 (28%), Positives = 78/191 (40%)
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G+ S LG G + D L P+ ++ K + ++ G H + +G ++ G G
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 80
Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LG D ++L +V T +L G V G FG LG P
Sbjct: 81 QLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ-- 138
Query: 414 VSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLF--GFGDNERAQLGHD--TLR 468
+S L P +I SL+ V I+ GL H + T+ G +F G G RA+ H TL
Sbjct: 139 ISGPCLIPQKIKQSLKEKAVG-IAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLP 197
Query: 469 ---GCLEPTEI 476
EP EI
Sbjct: 198 VFWAAKEPCEI 208
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 54/215 (25%), Positives = 81/215 (37%)
Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
G+N++GQLG G D P+ + + + + IA G + +TG G ++ G
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 80
Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
LG D L G V V+ G + + L +G V + G G LG
Sbjct: 81 QLGLNHTEDVLCFTLCTAL--SGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ 138
Query: 360 EIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
L P+ + AV + A R ++G V F W G G R K
Sbjct: 139 ISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGLV--FQW-GTGMASRAKRVHQGKT 195
Query: 419 L-------RPRILDSLRAHHVSQISTGLYHTVVVT 446
L P + L V +++ G YH V +T
Sbjct: 196 LPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCVSLT 230
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 152 (58.6 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 56/170 (32%), Positives = 76/170 (44%)
Query: 124 LLISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
+L N V SCGS+ G LG HGP +CV I VV ++A HA S
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAGLRHAVAATAS 57
Query: 182 GQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
G VF G + CG R P+F P V L+ V AG + + LT
Sbjct: 58 GIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
G V+ GSN HGQL + + P P+ I A + V I +G ++++A
Sbjct: 117 GEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
Score = 145 (56.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 51/153 (33%), Positives = 74/153 (48%)
Query: 231 LTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V +CGSN+ GQLG HG P++I +E VV IAAG + +A T +G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKE--KVVCIAAGLRHAVAATASG 58
Query: 289 VVYSFGSGSNFCLGHGEQHDELQP---RAIQTFRRKGIH---VVRVSAGDEHVVALDSSG 342
+V+ +G+G C G + P A + R G+ + V AG +H +L +G
Sbjct: 59 IVFQWGTGLASC-GRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
VY WG G L + LP P +++H
Sbjct: 118 EVYVWGSNKHGQLANEAAF---LPVP-QKIEAH 146
Score = 129 (50.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/133 (36%), Positives = 66/133 (49%)
Query: 284 VTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+T NG V S GS S LG HG + + P+AI+ + K VV ++AG H VA +S
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIELHKEK---VVCIAAGLRHAVAATAS 57
Query: 342 GYVYTWGKGY--CGA-LGHGDEIDK--TLPEP--LSSLKSHLAVQVCARKRKTFVLVDTG 394
G V+ WG G CG L G + T EP ++ L++ A+ V A + L D G
Sbjct: 58 GIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 395 SVYGFGWMGFGSL 407
VY +G G L
Sbjct: 118 EVYVWGSNKHGQL 130
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 67/232 (28%), Positives = 99/232 (42%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVP 217
VV ++A HA SG VF G + CG R P+F P V L+
Sbjct: 19 VVCIAAGLRHAVAATASGIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSK 77
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAA 276
V AG + + LT G V+ GSN HGQL + + P P+ I A + V I +
Sbjct: 78 AMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWS 136
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGH------G---EQHDEL-----QPRAIQTFRRKG 322
G ++++A T G ++++G LG G E+ D P ++ +
Sbjct: 137 GWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCL 196
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
VS G EH +A+ G Y+WG G G G E + P+P+ +L S
Sbjct: 197 TGATEVSCGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLS 247
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 52/169 (30%), Positives = 78/169 (46%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGY--CGA-LGHGDEIDK--TLPEP--LSSLKSHLA 377
VV ++AG H VA +SG V+ WG G CG L G + T EP ++ L++ A
Sbjct: 19 VVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKA 78
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----HV 432
+ V A + L D G VY +G G L ++ P + + AH V
Sbjct: 79 MCVLAGSDHSASLTDAGEVYVWGSNKHGQLA------NEAAFLP-VPQKIEAHCFQNEKV 131
Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH--DTLRGC-LEPTEIFI 478
+ I +G H V T+ G++F +G + QLG +T G LE + F+
Sbjct: 132 TAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFL 180
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 40/160 (25%), Positives = 72/160 (45%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP---R 313
P+P+S + VV IAAG + +A T +G+V+ +G+G C G + P
Sbjct: 5 PSPESCCHMLHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASC-GRRLCPGQTLPLFFT 63
Query: 314 AIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
A + R G+ + V AG +H +L +G VY WG G L + + +P+ +
Sbjct: 64 AKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIE 122
Query: 371 S--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
+ ++ + + +TG ++ +G +G LG
Sbjct: 123 AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 162
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 53/175 (30%), Positives = 80/175 (45%)
Query: 198 RDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
++ + PI + P LVE + G + + L G + + GSN +GQLG D
Sbjct: 267 KENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQ-DL 325
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV--VYSFGSGSNFCLGHGEQHDELQPRA 314
+ P++ S + IAAG + LA+ G + S+G + LG G+ E PR
Sbjct: 326 ----GMKPVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKP--ENLPRE 379
Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
++ F G VSAG H + + G + WG G G LG G D+ PEP+
Sbjct: 380 VEGF--DGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDE--PEPM 430
Score = 144 (55.7 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 76/319 (23%), Positives = 130/319 (40%)
Query: 177 FVLQSGQ---VFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNFT 228
F SG+ V + GD + G ++ P + P +V L ++AG +
Sbjct: 36 FTSTSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAGHYHS 94
Query: 229 GFLTIRGHVHTCGSNTHGQLGH---GDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+T G + G N GQLG + D R PK + LE V A+G A+
Sbjct: 95 LAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGV-VSAAI 153
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+G ++ +G LG G E + P ++ + HVV+VS G H +AL G
Sbjct: 154 GDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAE--HVVKVSLGWGHALALTVDGK 211
Query: 344 VYTWGKGYCGALGH-GDEIDKTLPEPLS--SLKSHLA---VQVCARKRKTFVLVDTGSVY 397
V+ WG G +G+ G ++ +L + ++ S+K H A + + A ++K + +
Sbjct: 212 VFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDM 271
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
W P +++ V+ I+ G H++++ G L G N
Sbjct: 272 PIAW------------------EPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSN 313
Query: 458 ERAQLGHDTLRGCLEPTEI 476
QLG ++P +I
Sbjct: 314 IYGQLGRSKQDLGMKPVDI 332
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+L++ + ++ S GS++ G LG + Q + ++ + + ++A H
Sbjct: 291 IACGSDHSLILCHDGTLLSAGSNIYGQLGR---SKQDLGMKPVDITESP--ISIAAGLGH 345
Query: 175 AAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ + G+ + + G N S G +P PR VE G V+AG + +T
Sbjct: 346 SLAICNRGERNILSWGWNRSRQLGR---GKPENLPREVEGFDGESPASVSAGRVHSLCVT 402
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
+G G +G+LG G + D P P + +E G V+Q AG + L
Sbjct: 403 EKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVE--GCVLQAVAGFDHSL 450
Score = 115 (45.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 45/183 (24%), Positives = 83/183 (45%)
Query: 117 TTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
T+G T++ + ++ + G S + G G + + + N PS + +SA H+
Sbjct: 39 TSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVS--NLPS--DISSISAGHYHS 94
Query: 176 AFVLQSGQVFTCGDNSSFCCGHR--DTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLT 232
V SG+++ G N G D++R P+ VE L+ V + A + +
Sbjct: 95 LAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIG 154
Query: 233 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G + G + GQLG G+ ++ P + L VV+++ G + LA+T +G V+
Sbjct: 155 DDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLA-AEHVVKVSLGWGHALALTVDGKVF 213
Query: 292 SFG 294
+G
Sbjct: 214 GWG 216
Score = 102 (41.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 37/162 (22%), Positives = 74/162 (45%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
V ++ G +H + L G + + G G LG + D + +P+ +S + + A
Sbjct: 288 VADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQ-DLGM-KPVDITES--PISIAAGL 343
Query: 385 RKTFVLVDTG--SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
+ + + G ++ +GW LG RG + + PR ++ + +S G H+
Sbjct: 344 GHSLAICNRGERNILSWGWNRSRQLG---RGKPENL--PREVEGFDGESPASVSAGRVHS 398
Query: 443 VVVTDRGR--LFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
+ VT++G ++G G N R LG + EP + ++++E
Sbjct: 399 LCVTEKGEAWVWGCGKNGRLGLGSSSD----EPEPMLLEDVE 436
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 158 (60.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 58/194 (29%), Positives = 93/194 (47%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + + G V T G G + +P LV + V Q AG T L+
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVV--QAEAGGMHTVCLS 83
Query: 233 IRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G V++ G N G LG +++ P + L+E VVQ++AG S+ A+T +G V
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE--KVVQVSAGDSHTAALTDDGRV 140
Query: 291 YSFGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
+ +GS +N +G E + P +Q + VV+V++G++H+V L + G +YT
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQL----DVPVVKVASGNDHLVMLTADGDLYTL 196
Query: 348 GKGYCGALGHGDEI 361
G G G LG E+
Sbjct: 197 GCGEQGQLGRVPEL 210
Score = 138 (53.6 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 54/181 (29%), Positives = 81/181 (44%)
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
T G+V + G G LG GE E + A+ + VV+ AG H V L SG V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPED---VVQAEAGGMHTVCLSKSGQV 88
Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
Y++G GALG ++ + P VQV A T L D G V F W F
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRV--FLWGSF 146
Query: 405 -GSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
+ G G+ + + + + ++ V ++++G H V++T G L+ G E+ QL
Sbjct: 147 RDNNGVI--GLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQL 204
Query: 463 G 463
G
Sbjct: 205 G 205
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 47/151 (31%), Positives = 70/151 (46%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 68 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 119
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
VVQVSA ++H A + G+VF G DN+ G + + P V+ VP
Sbjct: 120 K--VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI-GLLEPMKKSMVP--VQVQLDVPV 174
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
+V +G + LT G ++T G GQLG
Sbjct: 175 VKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 146 (56.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 61/206 (29%), Positives = 92/206 (44%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 497 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 556
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 557 VKCLDGK-EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV-PRLAKVNSEN 614
Query: 322 GIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG--HGDEIDKT-----LPEPLSSLK 373
G+ V+AG ++ + L D+ + G Y G L GD + + +P LS K
Sbjct: 615 GVW--SVAAGQDYSLFLVDTEDFQP--GLCYSGRLDPTEGDNLPENHSGTKMPVLLSCSK 670
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGF 399
+V A K LVD ++ G+
Sbjct: 671 LGYISRVTAGKDSYLALVDK-NIMGY 695
Score = 145 (56.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 48/171 (28%), Positives = 80/171 (46%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+++G G LGHG+ LQP ++ G V+ + AG H +AL + VY+WG
Sbjct: 532 VWTWGKGKEGQLGHGDVLPRLQPLCVKCL--DGKEVIHLEAGGYHSLALTAKSQVYSWGS 589
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVY-GFGWMGF--G 405
G LGH D T+P L+ + S V V A + + LVDT G + G
Sbjct: 590 NTFGQLGHSD-FPTTVPR-LAKVNSENGVWSVAAGQDYSLFLVDTEDFQPGLCYSGRLDP 647
Query: 406 SLG--FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
+ G P+ K+ P +L + ++S+++ G + + D+ + G+
Sbjct: 648 TEGDNLPENHSGTKM--PVLLSCSKLGYISRVTAGKDSYLALVDKN-IMGY 695
Score = 132 (51.5 bits), Expect = 0.00010, P = 0.00010
Identities = 53/199 (26%), Positives = 83/199 (41%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 531 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 589
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-----GVVYSFGSGS 297
NT GQLGH D P+ +A + V +AAG Y L + G+ YS
Sbjct: 590 NTFGQLGHSD-FPTTVPR-LAKVNSENGVWSVAAGQDYSLFLVDTEDFQPGLCYSGRLDP 647
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
E H + + + + G ++ RV+AG + +AL + GY +L
Sbjct: 648 TEGDNLPENHSGTKMPVLLSCSKLG-YISRVTAGKDSYLALVDKNIM-----GYIASLHE 701
Query: 358 GDEIDKTLPEPLSSLKSHL 376
++ LS +KS +
Sbjct: 702 LATTERRFYSKLSDIKSQI 720
Score = 81 (33.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 103 SSDIVETS-AGNMQIT--TGRYHTLLISNSSV-FSCGSSL---CGVLG--HGPETTQC-V 152
S+ I+E++ G +T TG +HT +++S V + G + C V + PE +
Sbjct: 85 SNPILESALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSI 144
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
S + + A ++Q++ E H + S +++ G G T P+ +P+ VE
Sbjct: 145 SDSETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGCQL--GLITTTFPVTKPQKVEH 202
Query: 213 LKGVPCKQVTAG 224
L G QV G
Sbjct: 203 LAGRVVLQVACG 214
Score = 66 (28.3 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 38/131 (29%), Positives = 55/131 (41%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEA-------LKG 215
+VV V+ H V SG V+ G+NS+ C N+P + P V L
Sbjct: 97 YVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAV--ANQPYVPEPNPVSISDSETSPLLA 154
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVV-Q 273
V Q+ G T L++ + G+ QLG T T P+ + L G VV Q
Sbjct: 155 VRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHL--AGRVVLQ 210
Query: 274 IAAGPSYMLAV 284
+A G + LA+
Sbjct: 211 VACGAFHSLAL 221
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 144 (55.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 47/135 (34%), Positives = 67/135 (49%)
Query: 231 LTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
LT G V +CGSN+ GQLG HG P++I +E VV IAAG + +A T +G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKE--KVVCIAAGLRHAVAATASG 58
Query: 289 VVYSFGSGSNFCLGHGEQHDELQP---RAIQTFRRKGIH---VVRVSAGDEHVVALDSSG 342
+V+ +G+G C G + P A + R G+ + V AG +H +L +G
Sbjct: 59 IVFQWGTGLASC-GRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 343 YVYTWGKGYCGALGH 357
VY WG G L +
Sbjct: 118 EVYVWGSNKHGQLAN 132
Score = 143 (55.4 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 48/136 (35%), Positives = 60/136 (44%)
Query: 124 LLISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
+L N V SCGS+ G LG HGP +CV I VV ++A HA S
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIELHKEK-VVCIAAGLRHAVAATAS 57
Query: 182 GQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
G VF G + CG R P+F P V L+ V AG + + LT
Sbjct: 58 GIVFQWGTGLA-SCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 116
Query: 235 GHVHTCGSNTHGQLGH 250
G V+ GSN HGQL +
Sbjct: 117 GEVYVWGSNKHGQLAN 132
Score = 129 (50.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/133 (36%), Positives = 66/133 (49%)
Query: 284 VTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+T NG V S GS S LG HG + + P+AI+ + K VV ++AG H VA +S
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIELHKEK---VVCIAAGLRHAVAATAS 57
Query: 342 GYVYTWGKGY--CGA-LGHGDEIDK--TLPEP--LSSLKSHLAVQVCARKRKTFVLVDTG 394
G V+ WG G CG L G + T EP ++ L++ A+ V A + L D G
Sbjct: 58 GIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 395 SVYGFGWMGFGSL 407
VY +G G L
Sbjct: 118 EVYVWGSNKHGQL 130
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 133 (51.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+S+G G + LGHG+ LQP +++ G V+++SAG H +AL + VY+WG
Sbjct: 523 VWSWGRGKDGQLGHGDVLPRLQPLCVKSL--DGKEVIQLSAGGHHSLALTAKSQVYSWGS 580
Query: 350 GYCGALGHGDEIDKTLP 366
G LGH + T+P
Sbjct: 581 NIFGQLGHTNS-PTTVP 596
Score = 126 (49.4 bits), Expect = 0.00046, P = 0.00046
Identities = 53/187 (28%), Positives = 84/187 (44%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
+V+Q A G ++ L +T G VYSFG + G E+ P T G HV+ V+
Sbjct: 42 TVLQAALGTNHGLLLTEGGEVYSFGK-LPWRSGP-EEFCANSPILENTLL--GQHVITVA 97
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH----LAVQV----C 381
AG H A+ G VY WG G ++ P+P+S S L+V+V C
Sbjct: 98 AGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSVRVLQLAC 157
Query: 382 ARKRKTFVLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
+ T L + ++ +G +G + FP V +P+ ++ L V QI+ G
Sbjct: 158 GEEH-TLALSLSREIWAWGSGCQLGLITTTFP-------VTKPQKVEHLAGRVVLQIACG 209
Query: 439 LYHTVVV 445
YH++ +
Sbjct: 210 AYHSLAL 216
Score = 112 (44.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 222
V+Q + NH + + G+V++ G + G + N PI L L G V
Sbjct: 43 VLQAALGTNHGLLLTEGGEVYSFG-KLPWRSGPEEFCANSPI----LENTLLGQHVITVA 97
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-----PLEEVGSVVQIA 275
AG G +T G V+ G+N+ GQ + + + P P SI+ PL V V+Q+A
Sbjct: 98 AGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSV-RVLQLA 156
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA++ + ++++GSG L +P+ ++ G V++++ G H
Sbjct: 157 CGEEHTLALSLSREIWAWGSGCQLGL-ITTTFPVTKPQKVEHLA--GRVVLQIACGAYHS 213
Query: 336 VAL 338
+AL
Sbjct: 214 LAL 216
Score = 110 (43.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 309 ELQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
++ PR ++ R + V ++ +G+ + V++WG+G G LGHGD + +
Sbjct: 485 QVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDGQLGHGDVLPRLQ 544
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
P + SL +Q+ A + L VY +G FG LG
Sbjct: 545 PLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLG 587
Score = 87 (35.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 53/182 (29%), Positives = 74/182 (40%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q G H LL++ V+S G GPE S N HV+ V+A
Sbjct: 44 LQAALGTNHGLLLTEGGEVYSFGKL---PWRSGPEEFCANSPILENTLLGQHVITVAAGS 100
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEA-------LKGVPCKQVTAG 224
H V + G V+ G+NSS C N+P + P+ + L V Q+ G
Sbjct: 101 FHNGAVTEGGVVYMWGNNSSGQCAV--ANQPYVPEPQPISISDSETSPLLSVRVLQLACG 158
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVV-QIAAGPSYML 282
T L++ + GS QLG T T P+ + L G VV QIA G + L
Sbjct: 159 EEHTLALSLSREIWAWGSGC--QLGLITTTFPVTKPQKVEHL--AGRVVLQIACGAYHSL 214
Query: 283 AV 284
A+
Sbjct: 215 AL 216
Score = 87 (35.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 34/114 (29%), Positives = 53/114 (46%)
Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS-------------VYGFGWMGFGSLGFP 410
+LP LS + L +V K +T L T S V+ +G G LG
Sbjct: 478 SLPGLLSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDGQLGHG 537
Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
D V + L+P + SL V Q+S G +H++ +T + +++ +G N QLGH
Sbjct: 538 D--VLPR-LQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLGH 588
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 147 (56.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 47/171 (27%), Positives = 78/171 (45%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+++G G + LGHG+ LQP ++ G V+ + AG H +AL + VY+WG
Sbjct: 522 VWTWGKGKDGQLGHGDVLPRLQPLCVKCL--DGKEVIHLEAGGYHSLALTAKSQVYSWGS 579
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVY-GFGWMGFGSL 407
G LGH D T+P L+ + S V V A + + LVDT G + G
Sbjct: 580 NTFGQLGHSD-FPTTVPR-LAKMNSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDP 637
Query: 408 ----GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
P+ K P +L + ++S+++ G + + D+ + G+
Sbjct: 638 TEGDNLPENHSGTKT--PVLLSCSKLGYISRVTAGKDSCLALVDKN-IMGY 685
Score = 143 (55.4 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 54/199 (27%), Positives = 84/199 (42%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 521 EVWTWGKGKDGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 579
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-----GVVYSFGSGS 297
NT GQLGH D P+ +A + V +AAG Y L + G+ YS
Sbjct: 580 NTFGQLGHSD-FPTTVPR-LAKMNSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDP 637
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
E H + + + + G ++ RV+AG + +AL + GY +L
Sbjct: 638 TEGDNLPENHSGTKTPVLLSCSKLG-YISRVTAGKDSCLALVDKNIM-----GYIASLHE 691
Query: 358 GDEIDKTLPEPLSSLKSHL 376
++ LS +KSH+
Sbjct: 692 LATTERRFYSKLSDIKSHV 710
Score = 136 (52.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 60/206 (29%), Positives = 90/206 (43%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 487 PRLLRRAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDGQLGHGDVLPRLQPLC 546
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 547 VKCLDGK-EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV-PRLAKMNSEN 604
Query: 322 GIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG--HGDEIDKT-----LPEPLSSLK 373
G+ V+AG ++ + L D+ + G Y G GD + + P LS K
Sbjct: 605 GVW--SVAAGQDYSLFLVDTEDFQP--GLYYSGRQDPTEGDNLPENHSGTKTPVLLSCSK 660
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGF 399
+V A K LVD ++ G+
Sbjct: 661 LGYISRVTAGKDSCLALVDK-NIMGY 685
Score = 124 (48.7 bits), Expect = 0.00075, P = 0.00075
Identities = 51/187 (27%), Positives = 85/187 (45%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA-IQTFRRKGIHVVRV 328
+V+Q A G + + +T +G VYSFG+ L + EL P + I G +VV V
Sbjct: 42 TVLQAALGVKHGVLLTEDGEVYSFGT-----LPWRSEPAELCPSSPILENALVGQYVVTV 96
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH----LAV---QVC 381
+ G H A+ SG VY WG+ G ++ P P+S S LAV Q+
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLA 156
Query: 382 ARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
+ T L + ++ +G +G + FP V +P+ ++ L V Q++ G
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQLGLITTTFP-------VTKPQKVEHLAGRVVLQVACG 209
Query: 439 LYHTVVV 445
+H++ +
Sbjct: 210 AFHSLAL 216
Score = 96 (38.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 52/213 (24%), Positives = 92/213 (43%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASENHAAFVLQSGQVFTCGDNSS 192
GS G++ H + C S T P + V+Q + H + + G+V++ G +
Sbjct: 13 GSKERGLV-HVWQAGSC-SVTPERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFG---T 67
Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGH 250
P L AL G V G +G +T G V+ G N+ GQ + +
Sbjct: 68 LPWRSEPAELCPSSPILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVAN 127
Query: 251 GDTLDRPTPKSIA-----PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
+ P P SI+ PL V ++Q+A G + LA++ + ++++G+G L
Sbjct: 128 QQYVPEPNPVSISDSETSPLLAV-RILQLACGEEHTLALSISREIWAWGTGCQLGL-ITT 185
Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+P+ ++ G V++V+ G H +AL
Sbjct: 186 TFPVTKPQKVEHLA--GRVVLQVACGAFHSLAL 216
Score = 79 (32.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 32/114 (28%), Positives = 50/114 (43%)
Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS-------------VYGFGWMGFGSLGFP 410
+LP LS + L + K +T VL T S V+ +G G LG
Sbjct: 477 SLPGLLSQVSPRLLRRAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDGQLGHG 536
Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
D V + L+P + L V + G YH++ +T + +++ +G N QLGH
Sbjct: 537 D--VLPR-LQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGH 587
Score = 70 (29.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 49/182 (26%), Positives = 73/182 (40%)
Query: 114 MQITTGRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQ-CVSFTRI-NFPSAAHVVQVSA 170
+Q G H LL + V+S G+ L E + C S + N +VV V+
Sbjct: 44 LQAALGVKHGVLLTEDGEVYSFGT-----LPWRSEPAELCPSSPILENALVGQYVVTVAT 98
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----RPI-FRPRLVEALKGVPCKQVTAG 224
H+ V +SG V+ G+NS+ C + P+ L V Q+ G
Sbjct: 99 GSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACG 158
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVV-QIAAGPSYML 282
T L+I + G+ QLG T T P+ + L G VV Q+A G + L
Sbjct: 159 EEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHL--AGRVVLQVACGAFHSL 214
Query: 283 AV 284
A+
Sbjct: 215 AL 216
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/186 (29%), Positives = 77/186 (41%)
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
++ S GS NF LG D P+ + F R + ++S G H + LD ++ G
Sbjct: 1 MLLSLGSNGNFQLGLNNDEDVYSPQIVP-FDRA---IEKISCGGNHTLLLDEDSQLWACG 56
Query: 349 KGYCGALGHGDEIDKTLPEPLSS--LK-----SH--LAVQVCARKRKTFVLVDTGSVYGF 399
G G+ E+ + L PLS L+ SH C + V D V
Sbjct: 57 DNRKGQCGY--EVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSVIVHADRRRVCSC 114
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
G G LG +R S + I LD + IS GL H + VT+ G L+G GD
Sbjct: 115 GEGLSGELGQGNRSNSQGLREIDIPYLDD--KEFIIDISAGLRHWICVTNEGNLYGCGDG 172
Query: 458 ERAQLG 463
+ QLG
Sbjct: 173 RKGQLG 178
Score = 139 (54.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 59/247 (23%), Positives = 101/247 (40%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK---GVPCKQ- 220
+ ++S NH + + Q++ CGDN CG+ + P++ P + L+ V ++
Sbjct: 33 IEKISCGGNHTLLLDEDSQLWACGDNRKGQCGY-EVKEPLYNPLSPDYLRIFTRVSHERW 91
Query: 221 --VTAGLNFTGFLTI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSI-AP-LEEVGSVVQIA 275
+T G F+ + R V +CG G+LG G+ + + I P L++ ++ I+
Sbjct: 92 VFLTCGWEFSVIVHADRRRVCSCGEGLSGELGQGNRSNSQGLREIDIPYLDDKEFIIDIS 151
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ--TFRRKGIHVVRVSAGDE 333
AG + + VT G +Y G G LG + + + +F + H V G +
Sbjct: 152 AGLRHWICVTNEGNLYGCGDGRKGQLG------PVVMKTVNKVSFLGRIEHAQAVVCGVQ 205
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
L +G+V G D E SS+ S + A +L
Sbjct: 206 FSAVLQETGHVIVLGGEKWNVAAECDAWQANNSELSSSICS-----ISANWSTLSLLSTE 260
Query: 394 GSVYGFG 400
G VY FG
Sbjct: 261 GCVYAFG 267
Score = 116 (45.9 bits), Expect = 0.00072, P = 0.00072
Identities = 67/290 (23%), Positives = 120/290 (41%)
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
+ + G N +F G + + ++ P++V + + ++++ G N T L + CG N
Sbjct: 2 LLSLGSNGNFQLG-LNNDEDVYSPQIVPFDRAI--EKISCGGNHTLLLDEDSQLWACGDN 58
Query: 244 THGQLGHG--DTLDRP-TPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGV-VYSFGSGS 297
GQ G+ + L P +P + V V + G + + V + V S G G
Sbjct: 59 RKGQCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSVIVHADRRRVCSCGEGL 118
Query: 298 NFCLGHGEQHDELQPRAIQT-FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
+ LG G + + R I + ++ +SAG H + + + G +Y G G G LG
Sbjct: 119 SGELGQGNRSNSQGLREIDIPYLDDKEFIIDISAGLRHWICVTNEGNLYGCGDGRKGQLG 178
Query: 357 HGDEIDKTLPEPLSSLK--SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
+ KT+ + +S L H VC + VL +TG V G + D
Sbjct: 179 --PVVMKTVNK-VSFLGRIEHAQAVVCGVQFSA-VLQETGHVIVLGGEKWNVAAECDAWQ 234
Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
++ +S + + IS +++ G ++ FG +RAQ H
Sbjct: 235 AN--------NSELSSSICSISANWSTLSLLSTEGCVYAFGRCDRAQKAH 276
Score = 109 (43.4 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 47/187 (25%), Positives = 68/187 (36%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFP---SAAHVVQVSASENHAAFVLQSGQVFTC 187
V SCG L G LG G + I+ P ++ +SA H V G ++ C
Sbjct: 111 VCSCGEGLSGELGQGNRSNS-QGLREIDIPYLDDKEFIIDISAGLRHWICVTNEGNLYGC 169
Query: 188 GDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
GD G + N+ F R +E + V C G+ F+ L GHV G
Sbjct: 170 GDGRKGQLGPVVMKTVNKVSFLGR-IEHAQAVVC-----GVQFSAVLQETGHVIVLGGEK 223
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
D E S+ I+A S + ++ G VY+FG H
Sbjct: 224 WNVAAECDAWQANNS------ELSSSICSISANWSTLSLLSTEGCVYAFGRCDRAQKAHT 277
Query: 305 EQHDELQ 311
+ D +Q
Sbjct: 278 KASDIVQ 284
Score = 60 (26.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
+A + QI++G H ++ T +G + +G NE +D R
Sbjct: 278 KASDIVQIASGTEHNILRTKKGSVLIYGWNEHGNASNDDKR 318
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 158 (60.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 89/402 (22%), Positives = 166/402 (41%)
Query: 115 QITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSF----TRINFPSAAHVVQVS 169
++ G HT++ ++ ++S G + GVLG ++ T INF + + +++
Sbjct: 43 EVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFPSKIKKIT 102
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH A +L++G+V+ G +C G P F + K ++ N
Sbjct: 103 CGDNHTAILLENGKVYITGGFRDYC-GV--LGLPSFGEKNELLTKSFEFIEIQFSYNNNN 159
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ + +N G L D+ + T SI +E ++ I +G +++ +
Sbjct: 160 ------NNNNSNNNNGGILKSQDSYENHTYDKSNNSIDLKDEDIKIINIISGEDHLICLD 213
Query: 286 -GNGVVYSFGSGSN--FCLGHGEQHDELQPRAIQT-----------FRRKGIHVVRVSAG 331
+ +++ G+ + C EQ D + R F K ++ G
Sbjct: 214 ESHEYIFTMGNSDSCQVCNNFYEQEDSEEQRIKYVYPNCYHYTYFGFENKFENIY--CGG 271
Query: 332 DEHVVALDSSGYVYTWGK---GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
+ V L++S VY G+ G CG + D I K E + L Q+C + T
Sbjct: 272 NNTYVQLENSLDVYGIGRNAYGSCG-VSSKDNIIKKF-EKIQELSQKKINQLCGGQSFTV 329
Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH--VSQISTGLYHTVVVT 446
L++ +Y +G + + D S P LD + ++ V I+ G H +V+T
Sbjct: 330 CLLNNNDLYIWGNREILGMEYDDDAYS-----PLELDFFKKNNYTVKNITCGTDHCLVLT 384
Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLE---PTEI----FIQEM 481
D G+LFG+G + +T +E P+EI F+++M
Sbjct: 385 DNGKLFGWGTGGN-EFDENTSLAVIEKNEPSEIDFFKFVKKM 425
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 158 (60.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 89/402 (22%), Positives = 166/402 (41%)
Query: 115 QITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSF----TRINFPSAAHVVQVS 169
++ G HT++ ++ ++S G + GVLG ++ T INF + + +++
Sbjct: 43 EVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFPSKIKKIT 102
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
+NH A +L++G+V+ G +C G P F + K ++ N
Sbjct: 103 CGDNHTAILLENGKVYITGGFRDYC-GV--LGLPSFGEKNELLTKSFEFIEIQFSYNNNN 159
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVT 285
+ + +N G L D+ + T SI +E ++ I +G +++ +
Sbjct: 160 ------NNNNSNNNNGGILKSQDSYENHTYDKSNNSIDLKDEDIKIINIISGEDHLICLD 213
Query: 286 -GNGVVYSFGSGSN--FCLGHGEQHDELQPRAIQT-----------FRRKGIHVVRVSAG 331
+ +++ G+ + C EQ D + R F K ++ G
Sbjct: 214 ESHEYIFTMGNSDSCQVCNNFYEQEDSEEQRIKYVYPNCYHYTYFGFENKFENIY--CGG 271
Query: 332 DEHVVALDSSGYVYTWGK---GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
+ V L++S VY G+ G CG + D I K E + L Q+C + T
Sbjct: 272 NNTYVQLENSLDVYGIGRNAYGSCG-VSSKDNIIKKF-EKIQELSQKKINQLCGGQSFTV 329
Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH--VSQISTGLYHTVVVT 446
L++ +Y +G + + D S P LD + ++ V I+ G H +V+T
Sbjct: 330 CLLNNNDLYIWGNREILGMEYDDDAYS-----PLELDFFKKNNYTVKNITCGTDHCLVLT 384
Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLE---PTEI----FIQEM 481
D G+LFG+G + +T +E P+EI F+++M
Sbjct: 385 DNGKLFGWGTGGN-EFDENTSLAVIEKNEPSEIDFFKFVKKM 425
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 147 (56.8 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 47/171 (27%), Positives = 77/171 (45%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+++G G LGHG+ LQP ++ G V+ + AG H +AL + VY+WG
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCL--DGKEVIHLEAGGYHSLALTAKSQVYSWGS 585
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVY-GFGWMGFGSL 407
G LGH D T+P L+ + S V V A + + LVDT G + G
Sbjct: 586 NTFGQLGHSD-FPTTVPR-LAKISSENGVWSVAAGRDYSLFLVDTEDFQPGLYYSGRQDP 643
Query: 408 ----GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
P+ K P +L + ++S+++ G + + D+ + G+
Sbjct: 644 TEGDNLPENHSGSKT--PVLLSCSKLGYISRVTAGKDSYLALVDKN-IMGY 691
Score = 135 (52.6 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 60/206 (29%), Positives = 90/206 (43%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 493 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 552
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 553 VKCLDGK-EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV-PRLAKISSEN 610
Query: 322 GIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG--HGDEIDKT-----LPEPLSSLK 373
G+ V+AG ++ + L D+ + G Y G GD + + P LS K
Sbjct: 611 GVW--SVAAGRDYSLFLVDTEDFQP--GLYYSGRQDPTEGDNLPENHSGSKTPVLLSCSK 666
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGF 399
+V A K LVD ++ G+
Sbjct: 667 LGYISRVTAGKDSYLALVDK-NIMGY 691
Score = 134 (52.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 53/199 (26%), Positives = 83/199 (41%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 527 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 585
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-----GVVYSFGSGS 297
NT GQLGH D P+ +A + V +AAG Y L + G+ YS
Sbjct: 586 NTFGQLGHSD-FPTTVPR-LAKISSENGVWSVAAGRDYSLFLVDTEDFQPGLYYSGRQDP 643
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
E H + + + + G ++ RV+AG + +AL + GY +L
Sbjct: 644 TEGDNLPENHSGSKTPVLLSCSKLG-YISRVTAGKDSYLALVDKNIM-----GYIASLHE 697
Query: 358 GDEIDKTLPEPLSSLKSHL 376
++ LS +KS +
Sbjct: 698 LATTERRFYSKLSDIKSQI 716
Score = 97 (39.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 46/181 (25%), Positives = 82/181 (45%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q + H + + G+V++ G + G + P P L AL G V G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFG-TLPWRSGPVEIC-PS-SPILENALVGQYVVTVATG 99
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-----PLEEVGSVVQIAAG 277
+G +T G + G N+ GQ + + + P P SIA PL V ++Q+A G
Sbjct: 100 SFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAV-RILQLACG 158
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+ LA++ + ++++G+G L +P+ ++ G V++V+ G H +A
Sbjct: 159 EEHTLALSISREIWAWGTGCQLGL-ITTAFPVTKPQKVEHLA--GRVVLQVACGAFHSLA 215
Query: 338 L 338
L
Sbjct: 216 L 216
Score = 79 (32.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 32/114 (28%), Positives = 50/114 (43%)
Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS-------------VYGFGWMGFGSLGFP 410
+LP LS + L + K +T VL T S V+ +G G LG
Sbjct: 483 SLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHG 542
Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
D V + L+P + L V + G YH++ +T + +++ +G N QLGH
Sbjct: 543 D--VLPR-LQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGH 593
Score = 64 (27.6 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 50/181 (27%), Positives = 73/181 (40%)
Query: 114 MQITTGRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSAS 171
+Q G H LL + V+S G+ GP C S + N +VV V+
Sbjct: 44 LQAALGVKHGVLLTEDGEVYSFGTL---PWRSGPVEI-CPSSPILENALVGQYVVTVATG 99
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLV---EA--LKGVPCKQVTAGL 225
H+ V +G + G+NS+ C + P P + EA L V Q+ G
Sbjct: 100 SFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGE 159
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVV-QIAAGPSYMLA 283
T L+I + G+ QLG T T P+ + L G VV Q+A G + LA
Sbjct: 160 EHTLALSISREIWAWGTGC--QLGLITTAFPVTKPQKVEHL--AGRVVLQVACGAFHSLA 215
Query: 284 V 284
+
Sbjct: 216 L 216
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 164 (62.8 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 38/106 (35%), Positives = 60/106 (56%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P+L++ P QV GL+ T LT+ G V+T GSN +GQLG GD +P + ++
Sbjct: 957 PQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDL--QPVSGPVR-VQ 1013
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
G++ Q+AAG ++ + +T G+VY+FG+ LG L+P
Sbjct: 1014 VPGAISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKP 1059
Score = 126 (49.4 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 45/129 (34%), Positives = 63/129 (48%)
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPK--SIAP--LEEVGS--VVQIAAGPSYMLAVTGN 287
+G + T G+ G D LD+ P+ +AP L+ S VVQ+A G + + +T
Sbjct: 927 KGELET-GAAGGGAATPTD-LDKDPPRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLA 984
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
G VY+FGS LG G+ P +Q G + +V+AG H V L S G VYT+
Sbjct: 985 GEVYTFGSNQYGQLGSGDLQPVSGPVRVQV---PGA-ISQVAAGSNHTVLLTSKGMVYTF 1040
Query: 348 GKGYCGALG 356
G G LG
Sbjct: 1041 GNYQKGQLG 1049
Score = 123 (48.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 35/99 (35%), Positives = 52/99 (52%)
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRIL 424
P+ L S VQV T VL G VY FG +G LG D + VS V R ++
Sbjct: 957 PQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPV-RVQVP 1015
Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ +SQ++ G HTV++T +G ++ FG+ ++ QLG
Sbjct: 1016 GA-----ISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLG 1049
Score = 66 (28.3 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 39/157 (24%), Positives = 69/157 (43%)
Query: 104 SDIVETSAGNM-QITTGR--YHTLLISNS-SVFSCGSSLCGVLGHG------PETTQCVS 153
+++V + A N+ + G H LL+++ +VF G++ G G P+ +
Sbjct: 641 TELVISKAANIVHVAVGHDGIHALLVNDDGTVFFAGTARRGEDGDSSKNRRQPKAVKPKK 700
Query: 154 FTRINFPSAAHVVQVSASENH-AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
T+I+ HVV +A N +AFV ++G++ G +++ C D F L+E
Sbjct: 701 MTKID----GHVVVHAACNNGTSAFVTKTGKLIMYGKDTAHC----DAMG--FVSELLEQ 750
Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
+V G L +G + + G N GQ G
Sbjct: 751 ----HVTKVALGKAHCVALNAKGQLFSFGLNNKGQCG 783
Score = 56 (24.8 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 353 GALGHGDEID-KTLPEPLSSLKSHLAVQVC-ARKRKTFVLVDTGSVYG 398
GA+G D D K P S S + Q+C A + F L+ TG V+G
Sbjct: 4354 GAVGSDDSSDHKHQPHLRLSHASRIQQQICEAETLRVFRLI-TGQVFG 4400
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 114 (45.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 40/110 (36%), Positives = 52/110 (47%)
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
N VYSFG GS LG G + + I F VV +SA HVVA+ S+G VY
Sbjct: 133 NRRVYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPETEVVGLSACMGHVVAVLSNGDVY 192
Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
WG G G LG + I T P + + +A C K T ++ + GS
Sbjct: 193 GWGNGRKGQLGAPEGII-TEPRKIEGVPFKVAKAACG-KEFTCLVGEPGS 240
Score = 89 (36.4 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 37/117 (31%), Positives = 56/117 (47%)
Query: 237 VHTCGSNTHGQLGHGDTLDR-PTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
V++ G + G+LG G + R P + IA P E VV ++A +++AV NG VY +
Sbjct: 136 VYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPET-EVVGLSACMGHVVAVLSNGDVYGW 194
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH--VVALDSSGYVYTWG 348
G+G LG E +PR I+ K V + + G E +V SG + G
Sbjct: 195 GNGRKGQLGAPEGIIT-EPRKIEGVPFK---VAKAACGKEFTCLVGEPGSGDILVMG 247
Score = 82 (33.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 28/69 (40%), Positives = 34/69 (49%)
Query: 241 GSNTHGQLGHGDTLDRPTPK----SIAPLE----EVGSVVQIAAGPSYMLAVTGNGVVYS 292
GSN GQLG G D PK S A E VVQ+AAG ++ L +T +G +YS
Sbjct: 8 GSNGSGQLGIGHKEDISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQDGEIYS 67
Query: 293 FGS-GSNFC 300
G S C
Sbjct: 68 SGDPASGAC 76
Score = 82 (33.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---------VVQVSASENHAAFVLQSG 182
F+ GS+ G LG G + V + F SAA VVQV+A NH + Q G
Sbjct: 5 FALGSNGSGQLGIGHKEDISVPKPAL-FSSAAGELSANPTSPVVQVAAGGNHTLLLTQDG 63
Query: 183 QVFTCGDNSSFCCG 196
++++ GD +S CG
Sbjct: 64 EIYSSGDPASGACG 77
Score = 54 (24.1 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G HTLL++ + ++S G G G T + P H + V A +
Sbjct: 47 VQVAAGGNHTLLLTQDGEIYSSGDPASGACGLKSATADSAGAGQPR-PPVFHKIHVPAEQ 105
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 162 (62.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 910 VRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 967
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 968 PSTQVTAGSNHTAVLVMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1021
Score = 141 (54.7 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 36/88 (40%), Positives = 45/88 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 916 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGP-STQVTA 974
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T VLV G V+ FG G LG P
Sbjct: 975 GSNHTAVLVMDGQVFTFGSFSKGQLGRP 1002
Score = 118 (46.6 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 46/156 (29%), Positives = 69/156 (44%)
Query: 246 GQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
G+ G D T P S+ EV +V Q++ G + + + NG VY+FG G + LGH
Sbjct: 892 GERGEKDASKVTTYPPGSVRFDCEVRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGH 950
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID- 362
G+ + P +Q +V+AG H L G V+T+G G LG +D
Sbjct: 951 GDVNSRGCPTLVQALPGPS---TQVTAGSNHTAVLVMDGQVFTFGSFSKGQLGR-PILDV 1006
Query: 363 -----KTLPEP-LSSLKSHLAVQVCARKRKTFVLVD 392
K P P + S A + A +TF+ +D
Sbjct: 1007 PYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRID 1042
Score = 111 (44.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AVQV + VL++ G VY FG+ G LG D V+ + P ++ +L +Q++
Sbjct: 918 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGC-PTLVQALPGPS-TQVT 973
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G HT V+ G++F FG + QLG L
Sbjct: 974 AGSNHTAVLVMDGQVFTFGSFSKGQLGRPIL 1004
Score = 81 (33.6 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 53/232 (22%), Positives = 94/232 (40%)
Query: 74 MSRNVQIELLNRCNGNWKRVLRFLQSVEH--SSDIVETSAGNMQITTGRYHTLL-ISNSS 130
+ + +Q++L +C L L+ H S+ E SA + GR L+ +N
Sbjct: 469 LQQELQLKLARKCLHACGISLFDLEKDLHIISTGFDEESA---ILGAGREFALMKTANGK 525
Query: 131 VFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
++ G SL G+ GP + V P H V +HA V + G VF G
Sbjct: 526 IYYTGKYQSL-GIKQGGPSAGKWVELPITKSPKIVHF-SVGHDGSHALLVAEDGSVFFTG 583
Query: 189 DNSSFCCGH----RDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGFLTIRGHVHTCGS 242
S G R ++P ++P+ + ++G V C G + ++ G ++ G
Sbjct: 584 SASKGEDGESAKSRRQSKP-YKPKKIIKMEGKIVVCTACNNGSS--SVISKDGELYMFGK 640
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
D + + ++ L+ V Q+A G ++ + NG V++FG
Sbjct: 641 ---------DAIYSDSSSLVSDLKG-HFVTQVAMGKAHTCVLMKNGEVWTFG 682
Score = 75 (31.5 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 47/186 (25%), Positives = 76/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ G W + + S IV S G+ G + L+ + S
Sbjct: 528 YTGKYQSLGIKQGGPSAGKWVEL-----PITKSPKIVHFSVGH----DGSHALLVAEDGS 578
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT-RINFPSAAHVVQVSASENHAAFVL-QSGQVFTC 187
VF GS+ G G ++ Q + + +V +A N ++ V+ + G+++
Sbjct: 579 VFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSVISKDGELYMF 638
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D++ LV LKG QV G T L G V T G N GQ
Sbjct: 639 GKDAIYS----DSSS------LVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQ 688
Query: 248 LGHGDT 253
G DT
Sbjct: 689 CGR-DT 693
Score = 39 (18.8 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1320 ITTDDGVIFQFKSSKKSNNGTDVNAG 1345
Score = 37 (18.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 278 PSYMLAVTGNGVVYSFGSGSNF 299
P+ +L + GN ++S + S++
Sbjct: 2046 PTMVLVLPGNEALFSLETASDY 2067
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 123 (48.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 44/127 (34%), Positives = 62/127 (48%)
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
G V T G+G G LG G+ + + L S+ + VQ A T L +G VY FG
Sbjct: 43 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGMHTVCLSKSGQVYSFGC 101
Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
G+LG D V + P ++ L+ V Q+S G HT +TD GR+F +G + R
Sbjct: 102 NDEGALG-RDTSVEGSEMVPGKVE-LQ-EKVVQVSAGDSHTAALTDDGRVFLWG-SFRHC 157
Query: 462 LGHDTLR 468
L H + R
Sbjct: 158 LFHTSQR 164
Score = 114 (45.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 38/116 (32%), Positives = 51/116 (43%)
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
T G+V + G G LG GE E + A+ + VV+ AG H V L SG V
Sbjct: 40 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPED---VVQAEAGGMHTVCLSKSGQV 96
Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
Y++G GALG ++ + P VQV A T L D G V+ +G
Sbjct: 97 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG 152
Score = 112 (44.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 48/168 (28%), Positives = 75/168 (44%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + + G V T G G + +P LV + V Q AG T L+
Sbjct: 34 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVV--QAEAGGMHTVCLS 91
Query: 233 IRGHVHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
G V++ G N G LG +++ P + L+E VVQ++AG S+ A+T +G V
Sbjct: 92 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE--KVVQVSAGDSHTAALTDDGRV 148
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ +GS + CL H Q R+G+ +RVS + V+ L
Sbjct: 149 FLWGSFRH-CLFHTSQRLGWGKEVW----RQGLSHLRVSKDNNGVIGL 191
Score = 81 (33.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 31/96 (32%), Positives = 46/96 (47%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPS 161
D+V+ AG M HT+ +S S V+S G + G LG E ++ V ++
Sbjct: 76 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVP-GKVELQE 127
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
VVQVSA ++H A + G+VF G + C H
Sbjct: 128 K--VVQVSAGDSHTAALTDDGRVFLWG-SFRHCLFH 160
Score = 78 (32.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
+ VV+V++G++H+V L + G +YT G G G LG E+
Sbjct: 208 VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPEL 246
Score = 55 (24.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
V ++++G H V++T G L+ G E+ QLG
Sbjct: 210 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 146 (56.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 46/171 (26%), Positives = 77/171 (45%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+++G G LGHG+ LQP ++ G V+ + AG H +AL + VY+WG
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCL--DGKEVIHLEAGGYHSLALTAKSQVYSWGS 585
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVY-GFGWMGFGSL 407
G LGH D T+P L+ + S V + A + + LVDT G + G
Sbjct: 586 NTFGQLGHSD-FPTTVPR-LAKISSENGVWSIAAGRDYSLFLVDTEDFQPGLYYSGRQDP 643
Query: 408 ----GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
P+ K P +L + ++S+++ G + + D+ + G+
Sbjct: 644 TEGDNLPENHSGSKT--PVLLSCSKLGYISRVTAGKDSYLALVDKN-IMGY 691
Score = 135 (52.6 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 54/199 (27%), Positives = 83/199 (41%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 527 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGS 585
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-----GVVYSFGSGS 297
NT GQLGH D P+ +A + V IAAG Y L + G+ YS
Sbjct: 586 NTFGQLGHSD-FPTTVPR-LAKISSENGVWSIAAGRDYSLFLVDTEDFQPGLYYSGRQDP 643
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
E H + + + + G ++ RV+AG + +AL + GY +L
Sbjct: 644 TEGDNLPENHSGSKTPVLLSCSKLG-YISRVTAGKDSYLALVDKNIM-----GYIASLHE 697
Query: 358 GDEIDKTLPEPLSSLKSHL 376
++ LS +KS +
Sbjct: 698 LATTERRFYSKLSDIKSQI 716
Score = 134 (52.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 59/206 (28%), Positives = 90/206 (43%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 493 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 552
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 553 VKCLDGK-EVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV-PRLAKISSEN 610
Query: 322 GIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG--HGDEIDKT-----LPEPLSSLK 373
G+ ++AG ++ + L D+ + G Y G GD + + P LS K
Sbjct: 611 GVW--SIAAGRDYSLFLVDTEDFQP--GLYYSGRQDPTEGDNLPENHSGSKTPVLLSCSK 666
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGF 399
+V A K LVD ++ G+
Sbjct: 667 LGYISRVTAGKDSYLALVDK-NIMGY 691
Score = 96 (38.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 46/181 (25%), Positives = 82/181 (45%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q + H + + G+V++ G + G + P P L AL G V G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFG-TLPWRSGPVEIC-PS-SPILENALVGQYVITVATG 99
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-----PLEEVGSVVQIAAG 277
+G +T G + G N+ GQ + + + P P SIA PL V ++Q+A G
Sbjct: 100 SFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAV-RILQLACG 158
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+ LA++ + ++++G+G L +P+ ++ G V++V+ G H +A
Sbjct: 159 EEHTLALSISREIWAWGTGCQLGL-ITTAFPVTKPQKVEHLA--GRVVLQVACGAFHSLA 215
Query: 338 L 338
L
Sbjct: 216 L 216
Score = 79 (32.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 32/114 (28%), Positives = 50/114 (43%)
Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS-------------VYGFGWMGFGSLGFP 410
+LP LS + L + K +T VL T S V+ +G G LG
Sbjct: 483 SLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHG 542
Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
D V + L+P + L V + G YH++ +T + +++ +G N QLGH
Sbjct: 543 D--VLPR-LQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGH 593
Score = 63 (27.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 49/181 (27%), Positives = 73/181 (40%)
Query: 114 MQITTGRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSAS 171
+Q G H LL + V+S G+ GP C S + N +V+ V+
Sbjct: 44 LQAALGVKHGVLLTEDGEVYSFGTL---PWRSGPVEI-CPSSPILENALVGQYVITVATG 99
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLV---EA--LKGVPCKQVTAGL 225
H+ V +G + G+NS+ C + P P + EA L V Q+ G
Sbjct: 100 SFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGE 159
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVV-QIAAGPSYMLA 283
T L+I + G+ QLG T T P+ + L G VV Q+A G + LA
Sbjct: 160 EHTLALSISREIWAWGTGC--QLGLITTAFPVTKPQKVEHL--AGRVVLQVACGAFHSLA 215
Query: 284 V 284
+
Sbjct: 216 L 216
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 142 (55.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 68/258 (26%), Positives = 111/258 (43%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
P++VE +K V K + G+ T LT G ++ G N HG+LG GDT+DR TP + L+
Sbjct: 408 PKMVE-IKCV--KYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLK 464
Query: 267 -EVGSVVQIAAGPSYMLAVTGNGVVYSFG----SGSNFCLG-----HGEQHDELQ-PRA- 314
EV S IA ++ T +G +Y +G +G + H E++ P
Sbjct: 465 NEVVST--IACSSTHSACYTESGKMYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGG 522
Query: 315 -IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSL 372
+ F G + +++ G + L G V+ W EI +P PL ++L
Sbjct: 523 GVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMW------------EIPG-IPIPLRNAL 569
Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD--SLRAH 430
++H + L D+G V G G LG D +++ D L +
Sbjct: 570 ENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAENEPGIVKQLSFDPDGLNSD 629
Query: 431 H-VSQISTGLYHTVVVTD 447
V I+ G +H+V + +
Sbjct: 630 EFVVSIAAGEFHSVALVE 647
Score = 110 (43.8 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 63/222 (28%), Positives = 90/222 (40%)
Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
TPK + E+ V IA G A+T G +Y +G + LG G+ D P +
Sbjct: 407 TPKMV----EIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRV-- 460
Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK--TLPEPLSSLKSH 375
R K V ++ H SG +Y WG+ DE K +P PL + S+
Sbjct: 461 IRLKNEVVSTIACSSTHSACYTESGKMYVWGQS--------DETGKIQAIPSPLP-IHSY 511
Query: 376 LAVQVCARKRKTFVLVDTGSVYGF-GWMG-FGSLGFPDRGVS-----DKVLR---PRI-- 423
L R+ K+ + G V GF G G L R ++ +V P I
Sbjct: 512 LD-----REIKS---PNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMWEIPGIPI 563
Query: 424 --LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
++L H V I G +H V +TD G + G N+ QLG
Sbjct: 564 PLRNALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLG 605
Score = 66 (28.3 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
KQV G LT G+V T GSN++GQLG+
Sbjct: 336 KQVALGNYHIVLLTEGGNVWTWGSNSNGQLGY 367
Score = 63 (27.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 130 SVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAA--HVVQVSASENHAAFVLQSGQVFT 186
SVF+ G G LG G T C + ++N+ + V +V+ H FV ++
Sbjct: 2 SVFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYI 61
Query: 187 CG 188
CG
Sbjct: 62 CG 63
Score = 42 (19.8 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 115 QITTGRYHTLLISNSS-VFSCG 135
++ G YHT+ +++ ++ CG
Sbjct: 42 KVACGSYHTVFVTDDEHLYICG 63
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 152 (58.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 62/230 (26%), Positives = 106/230 (46%)
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-GSVVQIAAGPSYMLAVTGNGVVYSFG 294
+V+ CG G++G + + P+ + V+QI+ ++ LA+T G +YS+G
Sbjct: 217 NVYVCGIGAGGRIGFNTDVQY----NFIPIPGIIHKVIQISVSHTHSLALTKFGSIYSWG 272
Query: 295 -SGSN-FCLGHGE--QHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
+GS L + E + D +Q PR I F K ++ ++AG + VA + +Y+WG
Sbjct: 273 KNGSGELGLSNDELKKDDPIQITPRRISAF--KDYQIIGMAAGKSYSVAWTDTD-IYSWG 329
Query: 349 KGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
G LG D I + P ++ L S + VC R T L+ S+ F + +
Sbjct: 330 LNN-GQLGISDHISVVSTPRRVAGLLSPVIHAVCTT-RATICLLQNNSIIAF--CNYNQV 385
Query: 408 GFP---DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
P D G S KV + + SL +V ++ V+T+ G ++ F
Sbjct: 386 KLPFNVDFGSSLKVTKHPL--SLTRFNVRKLLASENKLAVLTELGEVYEF 433
Score = 127 (49.8 bits), Expect = 0.00029, P = 0.00029
Identities = 52/220 (23%), Positives = 95/220 (43%)
Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQ------ 311
+ ++P + + V+ P L + GN + Y FG+ N LG +G++ +
Sbjct: 122 EGLSPFQFLSRVLSSTIHPVLDLPIIGNEL-YGFGTNVNNTLGIANGKEPSSPERVFLLK 180
Query: 312 -----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
P + Q F R I V+ S V+ + S VY G G G +G ++
Sbjct: 181 NQTESPTSGQLFSRDKILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIGFNTDVQYNFI 240
Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS--DKV-LRPRI 423
P+ + H +Q+ + L GS+Y +G G G LG + + D + + PR
Sbjct: 241 -PIPGI-IHKVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRR 298
Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + + + + ++ G ++V TD ++ +G N QLG
Sbjct: 299 ISAFKDYQIIGMAAGKSYSVAWTDTD-IYSWGLNN-GQLG 336
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 162 (62.1 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 896 VRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 953
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 954 PSTQVTAGSNHTAVLVMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1007
Score = 141 (54.7 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 36/88 (40%), Positives = 45/88 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 902 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGP-STQVTA 960
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T VLV G V+ FG G LG P
Sbjct: 961 GSNHTAVLVMDGQVFTFGSFSKGQLGRP 988
Score = 118 (46.6 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 46/156 (29%), Positives = 69/156 (44%)
Query: 246 GQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
G+ G D T P S+ EV +V Q++ G + + + NG VY+FG G + LGH
Sbjct: 878 GERGEKDASKVTTYPPGSVRFDCEVRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGH 936
Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID- 362
G+ + P +Q +V+AG H L G V+T+G G LG +D
Sbjct: 937 GDVNSRGCPTLVQALPGPS---TQVTAGSNHTAVLVMDGQVFTFGSFSKGQLGR-PILDV 992
Query: 363 -----KTLPEP-LSSLKSHLAVQVCARKRKTFVLVD 392
K P P + S A + A +TF+ +D
Sbjct: 993 PYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRID 1028
Score = 111 (44.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AVQV + VL++ G VY FG+ G LG D V+ + P ++ +L +Q++
Sbjct: 904 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGC-PTLVQALPGPS-TQVT 959
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G HT V+ G++F FG + QLG L
Sbjct: 960 AGSNHTAVLVMDGQVFTFGSFSKGQLGRPIL 990
Score = 81 (33.6 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 53/232 (22%), Positives = 94/232 (40%)
Query: 74 MSRNVQIELLNRCNGNWKRVLRFLQSVEH--SSDIVETSAGNMQITTGRYHTLL-ISNSS 130
+ + +Q++L +C L L+ H S+ E SA + GR L+ +N
Sbjct: 455 LQQELQLKLARKCLHACGISLFDLEKDLHIISTGFDEESA---ILGAGREFALMKTANGK 511
Query: 131 VFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
++ G SL G+ GP + V P H V +HA V + G VF G
Sbjct: 512 IYYTGKYQSL-GIKQGGPSAGKWVELPITKSPKIVHF-SVGHDGSHALLVAEDGSVFFTG 569
Query: 189 DNSSFCCGH----RDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGFLTIRGHVHTCGS 242
S G R ++P ++P+ + ++G V C G + ++ G ++ G
Sbjct: 570 SASKGEDGESAKSRRQSKP-YKPKKIIKMEGKIVVCTACNNGSS--SVISKDGELYMFGK 626
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
D + + ++ L+ V Q+A G ++ + NG V++FG
Sbjct: 627 ---------DAIYSDSSSLVSDLKG-HFVTQVAMGKAHTCVLMKNGEVWTFG 668
Score = 75 (31.5 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 47/186 (25%), Positives = 76/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ G W + + S IV S G+ G + L+ + S
Sbjct: 514 YTGKYQSLGIKQGGPSAGKWVEL-----PITKSPKIVHFSVGH----DGSHALLVAEDGS 564
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT-RINFPSAAHVVQVSASENHAAFVL-QSGQVFTC 187
VF GS+ G G ++ Q + + +V +A N ++ V+ + G+++
Sbjct: 565 VFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSVISKDGELYMF 624
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D++ LV LKG QV G T L G V T G N GQ
Sbjct: 625 GKDAIYS----DSSS------LVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQ 674
Query: 248 LGHGDT 253
G DT
Sbjct: 675 CGR-DT 679
Score = 39 (18.8 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1314 ITTDDGVIFQFKSSKKSNNGTDVNAG 1339
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 278 PSYMLAVTGNGVVYSFGSGSNF 299
P+ +L + GN ++S + S++
Sbjct: 2065 PTMVLVLPGNEALFSLETASDY 2086
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 44/165 (26%), Positives = 69/165 (41%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
I + +V+ H + L + ++ +G CG LG G + SLK V
Sbjct: 467 ISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGV 526
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
+ + D G++ FG LG + D +P +L+ L ++ I G H
Sbjct: 527 GNYFSVICCDRGTLLTFGTAKNLGLG---KDAKDSA-KPMLLEQLLRENIKDIYCGHDHV 582
Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGL 487
V V + G G+G N+ QLG TL PT++F + E T L
Sbjct: 583 VAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKVFF--LNEATAL 625
Score = 116 (45.9 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 44/148 (29%), Positives = 65/148 (43%)
Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR--PIFRPRLVEALKG 215
+ PS + QV+ S+ H + ++F GDNS CG + + RLVE+LKG
Sbjct: 462 DLPSRISIKQVALSKTHTMVLTNDNELFGFGDNS---CGQLGFGKFSKMENGRLVESLKG 518
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQI 274
+ V G F+ RG + T G T LG G D D P + L ++ I
Sbjct: 519 RDIQSVGVGNYFSVICCDRGTLLTFG--TAKNLGLGKDAKDSAKPMLLEQLLRE-NIKDI 575
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
G +++AV +G +GS LG
Sbjct: 576 YCGHDHVVAVLESGECLGWGSNQYGQLG 603
Score = 92 (37.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 31/136 (22%), Positives = 57/136 (41%)
Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ + HT++++N + +F G + CG LG G + ++ + + + V
Sbjct: 471 QVALSKTHTMVLTNDNELFGFGDNSCGQLGFG-KFSKMENGRLVESLKGRDIQSVGVGNY 529
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+ G + T G + G +D + +P L+E L K + G + +
Sbjct: 530 FSVICCDRGTLLTFGTAKNLGLG-KDA-KDSAKPMLLEQLLRENIKDIYCGHDHVVAVLE 587
Query: 234 RGHVHTCGSNTHGQLG 249
G GSN +GQLG
Sbjct: 588 SGECLGWGSNQYGQLG 603
Score = 82 (33.9 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 28/91 (30%), Positives = 39/91 (42%)
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR-GV--------SDKVLRPRILDSLRAHHV 432
A K T +L D GS+ G L R G +D V +P IL V
Sbjct: 644 AGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQGF-PERV 702
Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
S G YH+ V+ + G++ FG N+ +LG
Sbjct: 703 VDFSVGSYHSGVILESGQVMIFGRNDNTELG 733
Score = 57 (25.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/92 (26%), Positives = 36/92 (39%)
Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP--EP 368
+P +Q F + VV S G H + SG V +G+ LG G+ + +P
Sbjct: 691 KPTILQGFPER---VVDFSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQKMAVRCVKP 747
Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
+ SL H V T V +Y +G
Sbjct: 748 VKSLLHHACTHVLCGDGFTLVSTTEQELYFWG 779
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 151 (58.2 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 77/324 (23%), Positives = 132/324 (40%)
Query: 144 HGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
H P TT + + A+ V V+V+A+ A L+ F +++ C +
Sbjct: 376 HSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFY---STAPCETAAQSGS 432
Query: 203 PIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P ++ L+ KQ + G + + IR GS +L L + +P+
Sbjct: 433 ASTGPESLKDLREEQVKQESLQGKKSSSLMDIREEELEGGSR---RLSLPGLLSQVSPRL 489
Query: 262 IAPLEEVGSVVQIAAGPSYM-----LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
+ V + + P+Y L + V+++G G LGHG+ LQP ++
Sbjct: 490 LRKAARVKTRTVVLT-PTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVK 548
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
G V+ + AG H +AL + VY+WG G LGH E T+P LS + S
Sbjct: 549 CL--DGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHS-EFPTTVPR-LSKVSSEN 604
Query: 377 AV-QVCARKRKTFVLVDTGSVY-GFGWMGFGSLG----FPDRGVSDKVLRPRILDSLRAH 430
V V A + + LVDT G + G P+ K P +L +
Sbjct: 605 GVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTKT--PVLLSCSKLG 662
Query: 431 HVSQISTGLYHTVVVTDRGRLFGF 454
++S+++ G + + D+ + G+
Sbjct: 663 YISRVTAGKDSYLALVDKN-IMGY 685
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 49/187 (26%), Positives = 85/187 (45%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA-IQTFRRKGIHVVRV 328
+V+Q A G + + +T +G VYSFG+ L + E+ P + + G HV+ V
Sbjct: 42 TVLQAALGVRHGVLLTEDGEVYSFGT-----LPWKSESAEICPSSPLLESALVGHHVITV 96
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH----LAV---QVC 381
+ G H A+ SG VY WG+ G ++ P P+S S LAV Q+
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLA 156
Query: 382 ARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
+ T L + ++ +G +G + FP V +P+ ++ L V Q++ G
Sbjct: 157 CGEEHTLALSLSREIWAWGTGCQLGLITTTFP-------VTKPQKVEHLAGRVVLQVACG 209
Query: 439 LYHTVVV 445
+H++ +
Sbjct: 210 AFHSLAL 216
Score = 101 (40.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
V+TWGKG G LGHGD + + P + L + + A + L VY +G
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNT 581
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD----RGRLFGFGDNER 459
FG LG + + PR+ + V ++ G +++ + D + L+ G +R
Sbjct: 582 FGQLGHSEFPTTV----PRLSKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDR 637
Query: 460 AQLGHDTL 467
A+ G DTL
Sbjct: 638 AE-G-DTL 643
Score = 97 (39.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 43/180 (23%), Positives = 79/180 (43%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+Q + H + + G+V++ G + P L AL G V G
Sbjct: 43 VLQAALGVRHGVLLTEDGEVYSFG---TLPWKSESAEICPSSPLLESALVGHHVITVATG 99
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGS----VVQIAAGP 278
+G +T G V+ G N GQ + + + P+P SI+ E S ++Q+A G
Sbjct: 100 SFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGE 159
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA++ + ++++G+G L +P+ ++ G V++V+ G H +AL
Sbjct: 160 EHTLALSLSREIWAWGTGCQLGL-ITTTFPVTKPQKVEHLA--GRVVLQVACGAFHSLAL 216
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 138 (53.6 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 47/171 (27%), Positives = 77/171 (45%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
V+++G G LGHG+ LQP ++ G V+ + AG H +AL + VY+WG
Sbjct: 527 VWTWGKGKEGQLGHGDVLPRLQPLCVKCL--DGKEVIYLEAGGYHSLALTAKSQVYSWGS 584
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVY-GFGWMGFGSL 407
G LGH D T+P L+ + S V V A + + LVDT G + G
Sbjct: 585 NTFGQLGHYD-FPTTVPR-LAKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDP 642
Query: 408 G----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
P+ K P +L + ++S+++ G + + D+ + G+
Sbjct: 643 AEGDNLPENHSGTKT--PVLLSCSKLGYISRVTAGKDSYLALVDKN-VMGY 690
Score = 136 (52.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 61/206 (29%), Positives = 90/206 (43%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTG----FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
PRL+ V + V ++G L ++R V T G GQLGHGD L R P
Sbjct: 492 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 551
Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
+ L+ V+ + AG + LA+T VYS+GS + LGH + + PR +
Sbjct: 552 VKCLDGK-EVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGHYDFPTTV-PRLAKVSSEN 609
Query: 322 GIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGAL--GHGDEIDKT-----LPEPLSSLK 373
G+ V+AG ++ + L D+ + G Y G GD + + P LS K
Sbjct: 610 GVW--SVAAGQDYSLFLVDTEDFQP--GLYYSGRQDPAEGDNLPENHSGTKTPVLLSCSK 665
Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGF 399
+V A K LVD +V G+
Sbjct: 666 LGYISRVTAGKDSYLALVDK-NVMGY 690
Score = 129 (50.5 bits), Expect = 0.00022, P = 0.00022
Identities = 55/203 (27%), Positives = 85/203 (41%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+V+T G GH D P +P V+ L G + AG + LT + V++ GS
Sbjct: 526 EVWTWGKGKEGQLGHGDV-LPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGS 584
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-----GVVYSF---- 293
NT GQLGH D P+ +A + V +AAG Y L + G+ YS
Sbjct: 585 NTFGQLGHYD-FPTTVPR-LAKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDP 642
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G N E H + + + + G ++ RV+AG + +AL + GY
Sbjct: 643 AEGDNL----PENHSGTKTPVLLSCSKLG-YISRVTAGKDSYLALVDKNVM-----GYIA 692
Query: 354 ALGHGDEIDKTLPEPLSSLKSHL 376
+L ++ LS +KS +
Sbjct: 693 SLHELATTERRFYAKLSDIKSQI 715
Score = 63 (27.2 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 48/182 (26%), Positives = 72/182 (39%)
Query: 114 MQITTGRYH-TLLISNSSVFSCGSSLCGVLGHGPETTQ-CVSFTRI-NFPSAAHVVQVSA 170
+Q G H LL + V+S G+ L E + C S + N VV V++
Sbjct: 44 LQAALGVKHGVLLTEDGEVYSFGT-----LPWRSEPAEICPSCPILENALIGQFVVTVAS 98
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----RPI-FRPRLVEALKGVPCKQVTAG 224
H V +SG + G+NS+ C + P+ +L V Q+ G
Sbjct: 99 GSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACG 158
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVV-QIAAGPSYML 282
T L+I + G+ QLG T T P+ + L G VV Q+A G + L
Sbjct: 159 EEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHL--AGRVVLQVACGAFHSL 214
Query: 283 AV 284
A+
Sbjct: 215 AL 216
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 150 (57.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 78/326 (23%), Positives = 131/326 (40%)
Query: 144 HGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
H P TT + + A+ V V+V+A+ A L+ F +++ C +
Sbjct: 376 HSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFY---STAPCEPGAPSGT 432
Query: 203 PIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
P ++ L+ KQ + G + + IR GS +L L + +P+
Sbjct: 433 ASTGPESLKDLREEQVKQESLQGKKSSSLMDIREEESEGGSR---RLSLPGLLSQVSPRL 489
Query: 262 IAPLEEVGSVVQIAAGPSYM-----LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
+ V + + P+Y L + V+++G G LGHG+ LQP ++
Sbjct: 490 LRKAARVKTRTVVLT-PTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVK 548
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
G V+ + AG H +AL + VY+WG G LGH E T+P LS + S
Sbjct: 549 CL--DGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHS-EFPTTVPR-LSKVSSES 604
Query: 377 AV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV-------LRPRILDSLR 428
V V A + LVDT G G DR D + P +L +
Sbjct: 605 GVWSVAAGHGYSLFLVDTEDFQP----GLYYSGRQDRAEGDTLPENPSGTTTPVLLSCSK 660
Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGF 454
++S+++ G + + D+ + G+
Sbjct: 661 LGYISRVTAGKDSYLALVDKN-IMGY 685
Score = 129 (50.5 bits), Expect = 0.00022, P = 0.00022
Identities = 50/187 (26%), Positives = 86/187 (45%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA-IQTFRRKGIHVVRV 328
+V+Q A G + + +T +G VYSFG+ L + E+ P + + G HVV V
Sbjct: 42 TVLQAALGVKHGVLLTEDGEVYSFGT-----LPWKSEAAEICPSSPLLESALVGHHVVTV 96
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH----LAV---QVC 381
+ G H A+ SG VY WG+ G ++ + P P+S S LAV Q+
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLA 156
Query: 382 ARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
+ T L + ++ +G +G + FP V +P+ ++ L V Q++ G
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQLGLITTTFP-------VTKPQKVEHLAGRVVLQVACG 209
Query: 439 LYHTVVV 445
+H++ +
Sbjct: 210 AFHSLAL 216
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 149 (57.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 78/290 (26%), Positives = 125/290 (43%)
Query: 213 LKGVPCKQVTAGLN--FTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
+K P K T ++ T LT ++ CG G+LG GD T S +E
Sbjct: 418 IKARPLKIQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGD---ESTRFSFVCIEGG 474
Query: 269 G----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-----EQHD---ELQPRAIQ 316
G V +A G + LA+T +G ++S+GS LG+G + D +L PR I
Sbjct: 475 GLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQLSPRQIF 534
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-----PEPL-S 370
+K + ++ +A H V +SG +YT+GK G LG D ++L P + +
Sbjct: 535 NPFKKEV-ILGAAASAVHSVVYSTSG-LYTFGKNE-GQLGLVDSDARSLEVQTTPRRVGA 591
Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP----DRGVSDKVLRPRILDS 426
SL S V A + T +L+ V+ F G+ L FP R + D + R S
Sbjct: 592 SLFSTPIQSVSATDQATAILLQNHEVWVFAHYGYSRLSFPLEINSRFIRDSFMATRYDTS 651
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
+ + + +I +G ++ G +F N+ L +L P +I
Sbjct: 652 I--NRIVKIRSGGNTICALSSSGDVFTVQVNKLENL--PSLTSTTNPAKI 697
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 93 (37.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 27/70 (38%), Positives = 31/70 (44%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQ--VC 381
V VS G H AL G + TWG G G LGHGD P + L + L Q VC
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVC 177
Query: 382 ARKRKTFVLV 391
T+V V
Sbjct: 178 G-PWNTYVCV 186
Score = 92 (37.4 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
LGHG E QPR ++ G+ + V+AG H + G +Y WG G LG
Sbjct: 13 LGHGSLESEQQPRLVEALG--GVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 84 (34.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
+PRLVEAL GVP + V AG + ++ G ++ G N GQLG
Sbjct: 23 QPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 73 (30.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
PLE +V ++ G + A+T G + ++G G LGHG++ PR ++ +G+
Sbjct: 113 PLEP--AVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGL 170
Query: 324 HVVRVSAG 331
V G
Sbjct: 171 RAQEVVCG 178
Score = 72 (30.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
VH + HGQLGHG P+ + L V + +AAG + V+ G +Y +G
Sbjct: 3 VHV-SPHRHGQLGHGSLESEQQPRLVEALGGV-PMRAVAAGGWHSACVSDGGDLYVWGWN 60
Query: 297 SNFCLG 302
+ LG
Sbjct: 61 ESGQLG 66
Score = 72 (30.4 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
P +LD V+ +S G HT +T G L +G + QLGH C P +
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRV 162
Score = 66 (28.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 24/81 (29%), Positives = 36/81 (44%)
Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH- 430
L+ +A C R T L G + +GW +G LG DR D PR ++ L A
Sbjct: 114 LEPAVAAVSCG-SRHTAALTRGGELNTWGWGKYGQLGHGDRASCD---HPRRVEQLWAEG 169
Query: 431 -HVSQISTGLYHTVV-VTDRG 449
++ G ++T V V +G
Sbjct: 170 LRAQEVVCGPWNTYVCVLQQG 190
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 144 (55.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 73/273 (26%), Positives = 116/273 (42%)
Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN-THGQLGHGDTLDRPTP----KSIAPLE 266
A++ K ++AG + + + G + GS+ + + P P KS+ L
Sbjct: 1111 AIESSRFKPISAGCAYCACV-VDGTAYFWGSSGIPSYYSAQKSTEPPEPAHAVKSLDLLS 1169
Query: 267 EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFC-LGHGEQHD-ELQPRAIQTFRRKGI 323
++ V I G + L +T NG+ YS G+ +N C LG G LQP + G+
Sbjct: 1170 QLNLQVHAIKCGRQHTLILTNNGL-YSLGN-NNLCQLGIGRHMQMALQPMLVTAL--DGM 1225
Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
++ + AG H A+ + G +Y WG G G LG G + P+ +S K +Q+
Sbjct: 1226 NITMLEAGQYHNAAV-ADGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLG 1284
Query: 384 KRKTFVLVDT-----------GSVYGFGWMGFGSLGF--PDRGVSDKVL--RPRILD-SL 427
T VL ++ FG FG LG D G + L R + D SL
Sbjct: 1285 HAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDCSL 1344
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
R H T + + V ++ RLF +G + +A
Sbjct: 1345 RLIH-----TKFFTNLAVDEQDRLFTWGSSPQA 1372
Score = 103 (41.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-- 365
+ L P + T G ++++S+G H + SS +YTWGK LG D+ + +
Sbjct: 1487 EHLTPHLVDTSEVAG-RILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLK 1545
Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
P P+ S++ + V C T V+ V FG G G D G S + +R R++
Sbjct: 1546 PSPIDSIERPMYVD-CGSDF-TLVMTTDHVVRAFGGNSNGQCG-RDLGPSVERMRQRVV 1601
Score = 97 (39.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 46/167 (27%), Positives = 71/167 (42%)
Query: 116 ITTGRYHTLLISNSSVFSCGSS-LCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I GR HTL+++N+ ++S G++ LC LG G + + ++ + A + H
Sbjct: 1178 IKCGRQHTLILTNNGLYSLGNNNLCQ-LGIGRHMQMALQPMLVTALDGMNITMLEAGQYH 1236
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--T 232
A V G+++ G G I P+LV K Q++ G T L
Sbjct: 1237 NAAVAD-GKLYMWGWGIYGQLGQGSCEN-IATPQLVSFFKFKKILQISLGHAHTLVLCGA 1294
Query: 233 IRGHVHT--CG-------SNTHGQLGHGDTLDRPTPKSIAPLE-EVG 269
H+ CG SN GQLG G++ D K+ P+ EVG
Sbjct: 1295 PNSHMEANHCGNELFVFGSNHFGQLGTGNS-DHGDTKTNLPVRLEVG 1340
Score = 42 (19.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 113 NMQITTGRYHT----LLISNSSVFSCGSSLCGVLG 143
N +T +YHT +++ S +FS L + G
Sbjct: 933 NFLVTNSKYHTNMTSIVLCQSGLFSSAIILAKIRG 967
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 146 (56.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 68/251 (27%), Positives = 112/251 (44%)
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV---GSVVQIAAGPSYMLAVTGNGVVYS 292
+++ CG G+LG D D+ + P++ V Q+ G + +AVT G +++
Sbjct: 342 NLYICGVGRGGRLGLSD--DQRVRFTYVPVQGALADRKVTQVVLGQDHTMAVTDKGELWT 399
Query: 293 FGSGSNFCLGHG----EQHDE----LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
+GS + LG+ + DE L P+ + +K + V+ VSA H VA ++ V
Sbjct: 400 WGSNAYSQLGYALPPPAKKDEEPMSLAPKQVFGALKKEV-VIGVSASAIHSVA-HTTNSV 457
Query: 345 YTWGKGYCGALGHGD------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
+ WGK G L D E+ +T + +SL S V V A + T VL+ V
Sbjct: 458 FCWGKN-SGQLALMDADSRSLEVQQTPRKVAASLFSAPIVMVSAIDKATTVLLANHIVCV 516
Query: 399 FGWMGFGSLGFP--DRGVSDKVLRPRIL---DSL--RAHHVSQISTGLYHTVVVTDRGRL 451
F G+ + FP D + + P ++ D+ + + I++G VT RG L
Sbjct: 517 FTNYGYNMVKFPEIDPFATYHISNPAVVLGYDAAASKGQRICHITSGGETIAAVTGRGDL 576
Query: 452 FGFGDNERAQL 462
F G N A +
Sbjct: 577 FVMGLNHNADV 587
>ASPGD|ASPL0000040680 [details] [associations]
symbol:AN2874 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:BN001306 EMBL:AACD01000051
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_660478.1 ProteinModelPortal:Q5B9A6
EnsemblFungi:CADANIAT00010215 GeneID:2873908 KEGG:ani:AN2874.2
Uniprot:Q5B9A6
Length = 1365
Score = 113 (44.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
VY G N LG G +Q + T + VV+V+AG EH +AL +YTWG
Sbjct: 906 VYVLGENGNGQLGMGNG-TPVQYKQ-PTKNTQLPDVVQVAAGGEHCIALTHDNKIYTWGD 963
Query: 350 GYCGALGH-GDEIDKTLPEPLSSLKSHLA-----VQVCARKRKTFVLVDTGSVYGFG 400
G LG + + +P + + +L QV A + FVL G VYG+G
Sbjct: 964 NSHGQLGRLTNSMTAQMPGEVDFSEVNLPDYTIFAQVVATRSACFVLTMFGDVYGWG 1020
Score = 89 (36.4 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 237 VHTCGSNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V+ G N +GQLG G+ P K ++ VVQ+AAG + +A+T + +Y++G
Sbjct: 906 VYVLGENGNGQLGMGN--GTPVQYKQPTKNTQLPDVVQVAAGGEHCIALTHDNKIYTWGD 963
Query: 296 GSNFCLG 302
S+ LG
Sbjct: 964 NSHGQLG 970
Score = 82 (33.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 404 FGSLGFPDRGVS-DKVLR-PRILDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNER 459
F + D G +++ P + + AH + +S G HT+ VT+ G+ G+G N+
Sbjct: 1264 FNKVAGRDEGTQIPAIMKVPTFVPGINAHDKGIKMVSAGWTHTIAVTNGGKALGWGSNDH 1323
Query: 460 AQLGHDTLRGCL-EPTEI 476
++ D + + +P EI
Sbjct: 1324 YEIHPDETKHPINDPMEI 1341
Score = 60 (26.2 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGF--PDRGV--SD-KVLRPRILDSLRAHHVSQISTG 438
K +FV+ ++G +G+ F F P V D KV +P + SLR V + G
Sbjct: 1168 KFHSFVIKESGDFLAWGYNKFAQTAFVPPAASVLRRDLKVDKPSTVASLRGQRVHFPTGG 1227
Query: 439 LYHTVVVTDRGRLFGFG 455
+ +V +T G+ +G
Sbjct: 1228 VDFSVALTAGGQCLSWG 1244
Score = 45 (20.9 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
+P + + R + +H + G + VAL + G +WG
Sbjct: 1209 KPSTVASLRGQRVHFP--TGGVDFSVALTAGGQCLSWG 1244
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 151 (58.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 44/115 (38%), Positives = 58/115 (50%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 896 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 953
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTA N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 954 PSTQVTACSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDIPYWNAKPAPMPNIGS 1007
Score = 136 (52.9 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 35/88 (39%), Positives = 45/88 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGP-STQVTA 960
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T VL+ G V+ FG G LG P
Sbjct: 961 CSNHTAVLLMDGQVFTFGSFSKGQLGRP 988
Score = 79 (32.9 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 50/230 (21%), Positives = 91/230 (39%)
Query: 74 MSRNVQIELLNRCNGNWKRVLRFLQSVEH--SSDIVETSAGNMQITTGRYHTLL-ISNSS 130
+ + +Q++L +C L L+ H S+ E SA + GR L+ +N
Sbjct: 455 LQQELQLKLARKCLHACGISLFDLEKDLHIISTGFDEESA---ILGAGREFALMKTANGK 511
Query: 131 VFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
++ G SL G+ GP + V P H V +HA V + G VF G
Sbjct: 512 IYYTGKYQSL-GIKQGGPSAGKWVELPITKSPKIVHF-SVGHDGSHALLVAEDGSVFFTG 569
Query: 189 DNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
S G R ++P ++P+ + ++G + ++ G ++ G
Sbjct: 570 SASKGEDGESTKSRRQSKP-YKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGK-- 626
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
D + + ++ L+ V Q+A G ++ + NG V++FG
Sbjct: 627 -------DAIYSDSSSLVSDLKG-HFVTQVAMGKAHTCVLMKNGEVWTFG 668
Score = 76 (31.8 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 46/186 (24%), Positives = 75/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ G W + + S IV S G+ G + L+ + S
Sbjct: 514 YTGKYQSLGIKQGGPSAGKWVEL-----PITKSPKIVHFSVGH----DGSHALLVAEDGS 564
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT--RINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
VF GS+ G G ++ Q + +I VV + + ++ + + G+++
Sbjct: 565 VFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMF 624
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D++ LV LKG QV G T L G V T G N GQ
Sbjct: 625 GKDAIYS----DSSS------LVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQ 674
Query: 248 LGHGDT 253
G DT
Sbjct: 675 CGR-DT 679
Score = 39 (18.8 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1314 ITTDDGVIFQFKSSKKSNNGTDVNAG 1339
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 278 PSYMLAVTGNGVVYSFGSGSNF 299
P+ +L + GN ++S + S++
Sbjct: 2065 PTMVLVLPGNEALFSLETASDY 2086
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 160 (61.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 809 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 866
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 867 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 920
Score = 137 (53.3 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 35/88 (39%), Positives = 45/88 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 815 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGP-STQVTA 873
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T VL+ G V+ FG G LG P
Sbjct: 874 GSNHTAVLLMDGQVFTFGSFSKGQLGRP 901
Score = 119 (46.9 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
H GS G+ P P S+ E+ +V Q++ G + + + NG VY+FG G
Sbjct: 786 HKDGSGERGEKDASKITTYP-PGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQ 843
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
+ LGHG+ + P +Q +V+AG H L G V+T+G G LG
Sbjct: 844 HGQLGHGDVNSRGCPTLVQALPGPS---TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR 900
Query: 358 GDEID------KTLPEP-LSSLKSHLAVQVCARKRKTFVLVD 392
+D K P P + S A + A +TF+ +D
Sbjct: 901 -PILDVPYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRID 941
Score = 110 (43.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AVQV + VL++ G VY FG+ G LG D V+ + P ++ +L +Q++
Sbjct: 817 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGC-PTLVQALPGPS-TQVT 872
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G HT V+ G++F FG + QLG L
Sbjct: 873 AGSNHTAVLLMDGQVFTFGSFSKGQLGRPIL 903
Score = 78 (32.5 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 49/230 (21%), Positives = 90/230 (39%)
Query: 74 MSRNVQIELLNRCNGNWKRVLRFLQSVEH--SSDIVETSAGNMQITTGRYHTLL-ISNSS 130
+ + +Q++L +C L L+ H S+ E SA + GR L+ +N
Sbjct: 368 LQQELQLKLARKCLHACGISLFDLEKDLHIISTGFDEESA---VLGAGREFALMKTANGK 424
Query: 131 VFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
++ G SL G+ GP + V P H V +HA V + G +F G
Sbjct: 425 IYYTGKYQSL-GIKQGGPSAGKWVELPITKSPKIVHF-SVGHDGSHALLVAEDGSIFFTG 482
Query: 189 DNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
S G R ++P ++P+ + ++G + ++ G ++ G
Sbjct: 483 SASKGEDGESTKSRRQSKP-YKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGK-- 539
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
D + + + L+ V Q+A G ++ + NG V++FG
Sbjct: 540 -------DAIYSDSSSLVTDLKG-HFVTQVAMGKAHTCVLMKNGEVWTFG 581
Score = 74 (31.1 bits), Expect = 9.3e-06, Sum P(3) = 9.3e-06
Identities = 45/186 (24%), Positives = 75/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ G W + + S IV S G+ G + L+ + S
Sbjct: 427 YTGKYQSLGIKQGGPSAGKWVEL-----PITKSPKIVHFSVGH----DGSHALLVAEDGS 477
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT--RINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+F GS+ G G ++ Q + +I VV + + ++ + + G+++
Sbjct: 478 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMF 537
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D++ LV LKG QV G T L G V T G N GQ
Sbjct: 538 GKDAIYS----DSSS------LVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQ 587
Query: 248 LGHGDT 253
G DT
Sbjct: 588 CGR-DT 592
Score = 38 (18.4 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1227 ITTDDGVVFQFKSSKKSNNGTDVNAG 1252
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 1956 PKLTSVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2002
>FB|FBgn0037116 [details] [associations]
symbol:CG7158 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0031982 "vesicle" evidence=ISS] [GO:0035011 "melanotic
encapsulation of foreign target" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 EMBL:AE014296 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0035011 EMBL:AY061403
RefSeq:NP_649347.1 UniGene:Dm.3610 SMR:Q9VNZ8 IntAct:Q9VNZ8
MINT:MINT-1031217 EnsemblMetazoa:FBtr0078462 GeneID:40410
KEGG:dme:Dmel_CG7158 UCSC:CG7158-RA FlyBase:FBgn0037116
InParanoid:Q9VNZ8 OMA:HWFILFN OrthoDB:EOG4S7H4T GenomeRNAi:40410
NextBio:818636 Uniprot:Q9VNZ8
Length = 1486
Score = 144 (55.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 61/201 (30%), Positives = 94/201 (46%)
Query: 285 TGNGVVYSFGSGSNFCLGH-GEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
+ GVV+ SG + +G GE E QPR ++ + +G ++ ++AG+EH V L +
Sbjct: 145 SAQGVVFVGASGETYVMGSCGEVFKAEQQPRHMRLYE-EGKELLDLAAGNEHFVMLVAPY 203
Query: 343 YVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVYGF 399
+ A + E ++ + +SS S +V R + + L+ T ++ F
Sbjct: 204 NLADDALQLSVASAKEEPEDERASVKSISSGHSERSVAANTRHLLHQGYALLHT-QLFTF 262
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
G G LG D V+R + LDS+ V I+ GL HTV T GRL+ +G N
Sbjct: 263 GASNNGLLGSGDHIRRANVMRLQKLDSMG---VCSIAAGLEHTVARTLDGRLYHWGLNNH 319
Query: 460 AQLGHDTLRGCLEPTEIFIQE 480
+QLG D P EI I E
Sbjct: 320 SQLGEDVS----SPMEITITE 336
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 143 (55.4 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 76/284 (26%), Positives = 122/284 (42%)
Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
+C G + + +P F P L+ + C + G N + LT G ++ G N H QL
Sbjct: 17 YCWGDKFSGKPTFNP-LIPNI----CF-MDNGYNHSLALTETGELYGWGDNRHHQLSSNK 70
Query: 253 ---TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
++D+P + P + V S I+ G ++ A+ NG++Y +G+ L G + E
Sbjct: 71 AITSIDKPIKIQVIPNQRVKS---ISCGGNFSAAIMENGLLYVWGT-----LIEGGKCTE 122
Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEH-VVALDS-----SGYVYTWGKGYCGALGH-GDEID 362
P + KG V VS G H V DS VYTWG G LG GD I
Sbjct: 123 -SPTKVDLL--KG--VTCVSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVGDSIT 177
Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
P ++ L S A+ VC + T +V+ V F W G+ SD+++
Sbjct: 178 NA-PRRVT-LGSK-AISVCCGEEFTAAIVEGNEV--FVW-GYNKSRQICSNNSDEIISIP 231
Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA-QLGHD 465
+ L + ++S + + G + +G NE+ ++G D
Sbjct: 232 VKPFL-GRDIVELSCTKNYIAARSGVGNVCVWGSNEQVCRIGDD 274
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 160 (61.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 896 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 953
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 954 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1007
Score = 137 (53.3 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 35/88 (39%), Positives = 45/88 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGP-STQVTA 960
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T VL+ G V+ FG G LG P
Sbjct: 961 GSNHTAVLLMDGQVFTFGSFSKGQLGRP 988
Score = 119 (46.9 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
H GS G+ P P S+ E+ +V Q++ G + + + NG VY+FG G
Sbjct: 873 HKDGSGERGEKDASKITTYP-PGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
+ LGHG+ + P +Q +V+AG H L G V+T+G G LG
Sbjct: 931 HGQLGHGDVNSRGCPTLVQALPGPS---TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR 987
Query: 358 GDEID------KTLPEP-LSSLKSHLAVQVCARKRKTFVLVD 392
+D K P P + S A + A +TF+ +D
Sbjct: 988 -PILDVPYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRID 1028
Score = 110 (43.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AVQV + VL++ G VY FG+ G LG D V+ + P ++ +L +Q++
Sbjct: 904 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGC-PTLVQALPGPS-TQVT 959
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G HT V+ G++F FG + QLG L
Sbjct: 960 AGSNHTAVLLMDGQVFTFGSFSKGQLGRPIL 990
Score = 77 (32.2 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 49/230 (21%), Positives = 90/230 (39%)
Query: 74 MSRNVQIELLNRCNGNWKRVLRFLQSVEH--SSDIVETSAGNMQITTGRYHTLL-ISNSS 130
+ + +Q++L +C L L+ H S+ E SA + GR L+ +N
Sbjct: 455 LQQELQLKLARKCLHACGISLFDLEKDLHIISTGFDEESA---ILGAGREFALMKTANGK 511
Query: 131 VFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
++ G SL G+ GP + V P H V +HA V + G +F G
Sbjct: 512 IYYTGKYQSL-GIKQGGPSAGKWVELPITKSPKIVHF-SVGHDGSHALLVAEDGSIFFTG 569
Query: 189 DNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
S G R ++P ++P+ + ++G + ++ G ++ G
Sbjct: 570 SASKGEDGESTKSRRQSKP-YKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGK-- 626
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
D + + + L+ V Q+A G ++ + NG V++FG
Sbjct: 627 -------DAIYSDSSSLVTDLKG-HFVTQVAMGKAHTCVLMKNGEVWTFG 668
Score = 74 (31.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 45/186 (24%), Positives = 75/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ G W + + S IV S G+ G + L+ + S
Sbjct: 514 YTGKYQSLGIKQGGPSAGKWVEL-----PITKSPKIVHFSVGH----DGSHALLVAEDGS 564
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT--RINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+F GS+ G G ++ Q + +I VV + + ++ + + G+++
Sbjct: 565 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMF 624
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D++ LV LKG QV G T L G V T G N GQ
Sbjct: 625 GKDAIYS----DSSS------LVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQ 674
Query: 248 LGHGDT 253
G DT
Sbjct: 675 CGR-DT 679
Score = 38 (18.4 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1314 ITTDDGVVFQFKSSKKSNNGTDVNAG 1339
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 2043 PKLTSVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2089
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 160 (61.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 934 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 991
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 992 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1045
Score = 137 (53.3 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 35/88 (39%), Positives = 45/88 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 940 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGP-STQVTA 998
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T VL+ G V+ FG G LG P
Sbjct: 999 GSNHTAVLLMDGQVFTFGSFSKGQLGRP 1026
Score = 119 (46.9 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
H GS G+ P P S+ E+ +V Q++ G + + + NG VY+FG G
Sbjct: 911 HKDGSGERGEKDASKITTYP-PGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQ 968
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
+ LGHG+ + P +Q +V+AG H L G V+T+G G LG
Sbjct: 969 HGQLGHGDVNSRGCPTLVQALPGPS---TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR 1025
Query: 358 GDEID------KTLPEP-LSSLKSHLAVQVCARKRKTFVLVD 392
+D K P P + S A + A +TF+ +D
Sbjct: 1026 -PILDVPYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRID 1066
Score = 110 (43.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AVQV + VL++ G VY FG+ G LG D V+ + P ++ +L +Q++
Sbjct: 942 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGC-PTLVQALPGPS-TQVT 997
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G HT V+ G++F FG + QLG L
Sbjct: 998 AGSNHTAVLLMDGQVFTFGSFSKGQLGRPIL 1028
Score = 77 (32.2 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 49/230 (21%), Positives = 90/230 (39%)
Query: 74 MSRNVQIELLNRCNGNWKRVLRFLQSVEH--SSDIVETSAGNMQITTGRYHTLL-ISNSS 130
+ + +Q++L +C L L+ H S+ E SA + GR L+ +N
Sbjct: 493 LQQELQLKLARKCLHACGISLFDLEKDLHIISTGFDEESA---ILGAGREFALMKTANGK 549
Query: 131 VFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
++ G SL G+ GP + V P H V +HA V + G +F G
Sbjct: 550 IYYTGKYQSL-GIKQGGPSAGKWVELPITKSPKIVHF-SVGHDGSHALLVAEDGSIFFTG 607
Query: 189 DNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
S G R ++P ++P+ + ++G + ++ G ++ G
Sbjct: 608 SASKGEDGESTKSRRQSKP-YKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGK-- 664
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
D + + + L+ V Q+A G ++ + NG V++FG
Sbjct: 665 -------DAIYSDSSSLVTDLKG-HFVTQVAMGKAHTCVLMKNGEVWTFG 706
Score = 74 (31.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 45/186 (24%), Positives = 75/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ G W + + S IV S G+ G + L+ + S
Sbjct: 552 YTGKYQSLGIKQGGPSAGKWVEL-----PITKSPKIVHFSVGH----DGSHALLVAEDGS 602
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT--RINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+F GS+ G G ++ Q + +I VV + + ++ + + G+++
Sbjct: 603 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMF 662
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D++ LV LKG QV G T L G V T G N GQ
Sbjct: 663 GKDAIYS----DSSS------LVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQ 712
Query: 248 LGHGDT 253
G DT
Sbjct: 713 CGR-DT 717
Score = 38 (18.4 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1352 ITTDDGVVFQFKSSKKSNNGTDVNAG 1377
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 2081 PKLTSVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2127
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 160 (61.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 896 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 953
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 954 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1007
Score = 137 (53.3 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 35/88 (39%), Positives = 45/88 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGP-STQVTA 960
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T VL+ G V+ FG G LG P
Sbjct: 961 GSNHTAVLLMDGQVFTFGSFSKGQLGRP 988
Score = 119 (46.9 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
H GS G+ P P S+ E+ +V Q++ G + + + NG VY+FG G
Sbjct: 873 HKDGSGERGEKDASKITTYP-PGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
+ LGHG+ + P +Q +V+AG H L G V+T+G G LG
Sbjct: 931 HGQLGHGDVNSRGCPTLVQALPGPS---TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR 987
Query: 358 GDEID------KTLPEP-LSSLKSHLAVQVCARKRKTFVLVD 392
+D K P P + S A + A +TF+ +D
Sbjct: 988 -PILDVPYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRID 1028
Score = 110 (43.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AVQV + VL++ G VY FG+ G LG D V+ + P ++ +L +Q++
Sbjct: 904 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGC-PTLVQALPGPS-TQVT 959
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G HT V+ G++F FG + QLG L
Sbjct: 960 AGSNHTAVLLMDGQVFTFGSFSKGQLGRPIL 990
Score = 76 (31.8 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 49/230 (21%), Positives = 90/230 (39%)
Query: 74 MSRNVQIELLNRCNGNWKRVLRFLQSVEH--SSDIVETSAGNMQITTGRYHTLL-ISNSS 130
+ + +Q++L +C L L+ H S+ E SA + GR L+ S+
Sbjct: 455 LQQELQLKLARKCLHACGISLFDLEKDLHIISTGFDEESA---VLGAGREFALMKTSSGK 511
Query: 131 VFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
++ G SL G+ GP + V P H V +HA V + G +F G
Sbjct: 512 IYYTGKYQSL-GIKQGGPSAGKWVELPITKSPKIVHF-SVGHDGSHALLVAEDGSIFFTG 569
Query: 189 DNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
S G R ++P ++P+ + ++G + ++ G ++ G
Sbjct: 570 SASKGEDGESTKSRRQSKP-YKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGK-- 626
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
D + + + L+ V Q+A G ++ + NG V++FG
Sbjct: 627 -------DAIYSDSSSLVTDLKG-HFVTQVAMGKAHTCVLMKNGEVWTFG 668
Score = 74 (31.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 45/186 (24%), Positives = 75/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ G W + + S IV S G+ G + L+ + S
Sbjct: 514 YTGKYQSLGIKQGGPSAGKWVEL-----PITKSPKIVHFSVGH----DGSHALLVAEDGS 564
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT--RINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+F GS+ G G ++ Q + +I VV + + ++ + + G+++
Sbjct: 565 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMF 624
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D++ LV LKG QV G T L G V T G N GQ
Sbjct: 625 GKDAIYS----DSSS------LVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQ 674
Query: 248 LGHGDT 253
G DT
Sbjct: 675 CGR-DT 679
Score = 38 (18.4 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1314 ITTDDGVVFQFKSSKKSNNGTDVNAG 1339
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 2043 PKLTSVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2089
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 160 (61.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 934 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 991
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 992 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1045
Score = 137 (53.3 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 35/88 (39%), Positives = 45/88 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 940 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGP-STQVTA 998
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T VL+ G V+ FG G LG P
Sbjct: 999 GSNHTAVLLMDGQVFTFGSFSKGQLGRP 1026
Score = 119 (46.9 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
H GS G+ P P S+ E+ +V Q++ G + + + NG VY+FG G
Sbjct: 911 HKDGSGERGEKDASKITTYP-PGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQ 968
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
+ LGHG+ + P +Q +V+AG H L G V+T+G G LG
Sbjct: 969 HGQLGHGDVNSRGCPTLVQALPGPS---TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR 1025
Query: 358 GDEID------KTLPEP-LSSLKSHLAVQVCARKRKTFVLVD 392
+D K P P + S A + A +TF+ +D
Sbjct: 1026 -PILDVPYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRID 1066
Score = 110 (43.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AVQV + VL++ G VY FG+ G LG D V+ + P ++ +L +Q++
Sbjct: 942 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGC-PTLVQALPGPS-TQVT 997
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G HT V+ G++F FG + QLG L
Sbjct: 998 AGSNHTAVLLMDGQVFTFGSFSKGQLGRPIL 1028
Score = 76 (31.8 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 49/230 (21%), Positives = 90/230 (39%)
Query: 74 MSRNVQIELLNRCNGNWKRVLRFLQSVEH--SSDIVETSAGNMQITTGRYHTLL-ISNSS 130
+ + +Q++L +C L L+ H S+ E SA + GR L+ S+
Sbjct: 493 LQQELQLKLARKCLHACGISLFDLEKDLHIISTGFDEESA---VLGAGREFALMKTSSGK 549
Query: 131 VFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
++ G SL G+ GP + V P H V +HA V + G +F G
Sbjct: 550 IYYTGKYQSL-GIKQGGPSAGKWVELPITKSPKIVHF-SVGHDGSHALLVAEDGSIFFTG 607
Query: 189 DNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
S G R ++P ++P+ + ++G + ++ G ++ G
Sbjct: 608 SASKGEDGESTKSRRQSKP-YKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGK-- 664
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
D + + + L+ V Q+A G ++ + NG V++FG
Sbjct: 665 -------DAIYSDSSSLVTDLKG-HFVTQVAMGKAHTCVLMKNGEVWTFG 706
Score = 74 (31.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 45/186 (24%), Positives = 75/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ G W + + S IV S G+ G + L+ + S
Sbjct: 552 YTGKYQSLGIKQGGPSAGKWVEL-----PITKSPKIVHFSVGH----DGSHALLVAEDGS 602
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT--RINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+F GS+ G G ++ Q + +I VV + + ++ + + G+++
Sbjct: 603 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMF 662
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D++ LV LKG QV G T L G V T G N GQ
Sbjct: 663 GKDAIYS----DSSS------LVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQ 712
Query: 248 LGHGDT 253
G DT
Sbjct: 713 CGR-DT 717
Score = 38 (18.4 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1352 ITTDDGVVFQFKSSKKSNNGTDVNAG 1377
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 2081 PKLTSVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2127
>SGD|S000000018 [details] [associations]
symbol:ATS1 "Protein required for modification of wobble
nucleosides in tRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0007017 "microtubule-based process" evidence=IGI;ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA;IPI] [GO:0002098 "tRNA wobble uridine
modification" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IGI;IMP] [GO:0007117 "budding cell bud
growth" evidence=IGI;IMP] SGD:S000000018 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0000226 EMBL:L05146 EMBL:BK006935
GO:GO:0007117 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
PIR:S36714 RefSeq:NP_009382.2 ProteinModelPortal:P31386 SMR:P31386
IntAct:P31386 MINT:MINT-2786397 STRING:P31386 PeptideAtlas:P31386
EnsemblFungi:YAL020C GeneID:851213 KEGG:sce:YAL020C CYGD:YAL020c
eggNOG:COG5184 HOGENOM:HOG000163478 KO:K15462 OMA:GAGCATS
OrthoDB:EOG4H75MP NextBio:968094 Genevestigator:P31386
GermOnline:YAL020C GO:GO:0002098 Uniprot:P31386
Length = 333
Score = 116 (45.9 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 50/166 (30%), Positives = 75/166 (45%)
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V+ GSN QLG G D TP+ P ++ V +IA G ++ + +T +G + G G
Sbjct: 4 VYAFGSNGQRQLGLGHDEDMDTPQRSVPGDDGAIVRKIACGGNHSVMLTNDGNLV--GCG 61
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
N GE R + +R + VV V+ G + V +D+ G V W +G
Sbjct: 62 DN---RRGELDSAQALRQVHDWRPVEVPAPVVDVACGWDTTVIVDADGRV--WQRG---- 112
Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
G E + PL+S +AV C + FV+V VYG+G
Sbjct: 113 -GGCYEFTQQ-HVPLNSNDERIAVYGCFQN---FVVVQGTRVYGWG 153
Score = 60 (26.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
G + VV R++G+G N + QL R EP ++
Sbjct: 136 GCFQNFVVVQGTRVYGWGSNTKCQLQEPKSRSLKEPVLVY 175
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 159 (61.0 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 896 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 953
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 954 PSTQVTAGSNHTAALLMDGQVFTFGSFSKGQLGR-PILDVPYWNAKPAPMPNIGS 1007
Score = 133 (51.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 34/88 (38%), Positives = 44/88 (50%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGP-STQVTA 960
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T L+ G V+ FG G LG P
Sbjct: 961 GSNHTAALLMDGQVFTFGSFSKGQLGRP 988
Score = 123 (48.4 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 47/162 (29%), Positives = 71/162 (43%)
Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
H GS G+ P P S+ E+ +V Q++ G + + + NG VY+FG G
Sbjct: 873 HKDGSGERGEKDASKITTYP-PGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
+ LGHG+ + P +Q +V+AG H AL G V+T+G G LG
Sbjct: 931 HGQLGHGDVNSRGCPTLVQALPGPS---TQVTAGSNHTAALLMDGQVFTFGSFSKGQLGR 987
Query: 358 GDEID------KTLPEP-LSSLKSHLAVQVCARKRKTFVLVD 392
+D K P P + S A + A +TF+ +D
Sbjct: 988 -PILDVPYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRID 1028
Score = 106 (42.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AVQV + VL++ G VY FG+ G LG D V+ + P ++ +L +Q++
Sbjct: 904 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGC-PTLVQALPGPS-TQVT 959
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G HT + G++F FG + QLG L
Sbjct: 960 AGSNHTAALLMDGQVFTFGSFSKGQLGRPIL 990
Score = 78 (32.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 49/230 (21%), Positives = 90/230 (39%)
Query: 74 MSRNVQIELLNRCNGNWKRVLRFLQSVEH--SSDIVETSAGNMQITTGRYHTLL-ISNSS 130
+ + +Q++L +C L L+ H S+ E SA + GR L+ +N
Sbjct: 455 LQQELQLKLARKCLHACGISLFDLEKDLHIISTGFDEESA---VLGAGREFALMKTANGK 511
Query: 131 VFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
++ G SL G+ GP + V P H V +HA V + G +F G
Sbjct: 512 IYYTGKYQSL-GIKQGGPSAGKWVELPITKSPKIVHF-SVGHDGSHALLVAEDGSIFFTG 569
Query: 189 DNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
S G R ++P ++P+ + ++G + ++ G ++ G
Sbjct: 570 SASKGEDGESTKSRRQSKP-YKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGK-- 626
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
D + + + L+ V Q+A G ++ + NG V++FG
Sbjct: 627 -------DAIYSDSSSLVTDLKG-HFVTQVAMGKAHTCVLMKNGEVWTFG 668
Score = 74 (31.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 45/186 (24%), Positives = 75/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ G W + + S IV S G+ G + L+ + S
Sbjct: 514 YTGKYQSLGIKQGGPSAGKWVEL-----PITKSPKIVHFSVGH----DGSHALLVAEDGS 564
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT--RINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+F GS+ G G ++ Q + +I VV + + ++ + + G+++
Sbjct: 565 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMF 624
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D++ LV LKG QV G T L G V T G N GQ
Sbjct: 625 GKDAIYS----DSSS------LVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQ 674
Query: 248 LGHGDT 253
G DT
Sbjct: 675 CGR-DT 679
Score = 41 (19.5 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK A E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 2043 PKLTAVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2089
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1314 ITTDDGVVFQFKSSKKSNNGTDVNAG 1339
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/107 (39%), Positives = 56/107 (52%)
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF-TGFLTIRGHVHTCGSNTHGQLG 249
SS R T P R L + V V+ G NF T L V T GSN HGQLG
Sbjct: 743 SSTAAPQRSTLHPS-RVILSQGPHDVKVSSVSCG-NFHTVLLASDRRVFTFGSNCHGQLG 800
Query: 250 HGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
GDTL + TP+ I P + V +VQ+AAG ++ + +G V++FG+
Sbjct: 801 VGDTLSKNTPQQVILPSDTV--IVQVAAGSNHTILRANDGSVFTFGA 845
Score = 135 (52.6 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 37/106 (34%), Positives = 49/106 (46%)
Query: 306 QHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
Q L P R I + + V VS G+ H V L S V+T+G G LG GD + K
Sbjct: 749 QRSTLHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKN 808
Query: 365 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
P+ + + VQV A T + + GSV+ FG G G L P
Sbjct: 809 TPQQVILPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQLARP 854
Score = 58 (25.5 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 20/83 (24%), Positives = 31/83 (37%)
Query: 168 VSASENHAAFVLQSGQVFT-CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
V ++ V SG V+ +N G T R +++ L V + G +
Sbjct: 564 VPSNRRKIVHVCASGHVYGYVSENGKIFMGGLHTMRVNVSSQMLNGLDNVMISSLALGKS 623
Query: 227 FTGFLTIRGHVHTCGSNTHGQLG 249
+T GH+ T G N Q G
Sbjct: 624 HGVAVTRNGHLFTWGLNNMNQCG 646
Score = 56 (24.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
VS +N + ++ ++H V ++G +FT G N+ CG ++ PR
Sbjct: 602 VSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSPR 658
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 164 (62.8 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 834 VRFDCELRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGC-PTLVQALPG- 891
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + AP+ +GS
Sbjct: 892 PSTQVTAGSNHTAILLMDGQVFTFGSFSKGQLGR-PILDMPYWNAKPAPMPNIGS 945
Score = 135 (52.6 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 34/88 (38%), Positives = 45/88 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 840 LRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGP-STQVTA 898
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T +L+ G V+ FG G LG P
Sbjct: 899 GSNHTAILLMDGQVFTFGSFSKGQLGRP 926
Score = 108 (43.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AVQV + +L++ G VY FG+ G LG D V+ + P ++ +L +Q++
Sbjct: 842 AVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGD--VNSRGC-PTLVQALPGPS-TQVT 897
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G HT ++ G++F FG + QLG L
Sbjct: 898 AGSNHTAILLMDGQVFTFGSFSKGQLGRPIL 928
Score = 74 (31.1 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 43/186 (23%), Positives = 75/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ G W + + S I++ S G+ G + L+ + S
Sbjct: 452 YTGKYQSLGIKQGGPSAGKWVEL-----PITKSPKIIQFSVGH----DGSHALLVADDGS 502
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT--RINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
+F GS+ G G ++ Q + +I V+ + + ++ + + G+++
Sbjct: 503 IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVISTACNNGSSSVISKDGELYMF 562
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D+ LV LKG QV G T L G V T G N GQ
Sbjct: 563 GKDAIYS----DSTS------LVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQ 612
Query: 248 LGHGDT 253
G DT
Sbjct: 613 CGR-DT 617
Score = 64 (27.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 48/232 (20%), Positives = 91/232 (39%)
Query: 74 MSRNVQIELLNRCNGNWKRVLRFLQSVEH--SSDIVETSAGNMQITTGRYHTLL-ISNSS 130
+ + +Q++L +C L L+ H S+ E SA + GR L+ ++
Sbjct: 393 LQQELQLKLARKCLHACGISLFDLEKDLHIISTGFDEESA---VLGAGREFALMKTASGK 449
Query: 131 VFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN--HAAFVLQSGQVFT 186
++ G SL G+ GP + V P ++Q S + HA V G +F
Sbjct: 450 IYYTGKYQSL-GIKQGGPSAGKWVELPITKSPK---IIQFSVGHDGSHALLVADDGSIFF 505
Query: 187 CGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
G S G R ++P ++P+ + ++G + ++ G ++ G
Sbjct: 506 TGSASKGEDGESTKSRRQSKP-YKPKKIIKMEGKIVISTACNNGSSSVISKDGELYMFGK 564
Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
D + + + L+ V Q+A G ++ + NG V++FG
Sbjct: 565 ---------DAIYSDSTSLVTDLKG-HFVTQVAMGKAHTCVLMKNGEVWTFG 606
Score = 39 (18.8 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 259 PKSIAPLEEVGSVVQI-----AAG-PSYMLAVTGNGVVYSFGSGSNF 299
PK + E + S +++ ++G P+ +L + GN ++S + S++
Sbjct: 1981 PKHASVHENLNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDY 2027
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1252 ITTDDGVVFQFKSSKKSNNGTDVNAG 1277
Score = 37 (18.1 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 417 KVLRPRILDSLRAHHVSQISTGLY 440
+V PR L ++ AH V + + LY
Sbjct: 3230 QVKTPRALPTMEAHQVIK-ANALY 3252
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 158 (60.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 43/115 (37%), Positives = 59/115 (51%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
+ F VQVS +H+ ++++G V+T G GH D N P LV+AL G
Sbjct: 919 VRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR-GSPTLVQALPG- 976
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGS 270
P QVTAG N T L + G V T GS + GQLG LD P + +P+ +G+
Sbjct: 977 PSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGR-PILDMPYWNAKPSPMPNIGA 1030
Score = 136 (52.9 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 35/88 (39%), Positives = 45/88 (51%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ V+VS G H V L +G VYT+G G G LGHGD + P + +L + QV A
Sbjct: 925 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGP-STQVTA 983
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
T VL+ G V+ FG G LG P
Sbjct: 984 GSNHTAVLLMDGQVFTFGSFSKGQLGRP 1011
Score = 110 (43.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
AVQV + VL++ G VY FG+ G LG D V+ + P ++ +L +Q++
Sbjct: 927 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRG-SPTLVQALPGPS-TQVT 982
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
G HT V+ G++F FG + QLG L
Sbjct: 983 AGSNHTAVLLMDGQVFTFGSFSKGQLGRPIL 1013
Score = 73 (30.8 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 46/186 (24%), Positives = 75/186 (40%)
Query: 71 YAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS 130
Y G +++ I+ +G W + V S IV+ S G+ G + L+ + S
Sbjct: 543 YTGKYQSLGIKQGGPSSGKWVEL-----PVTKSPKIVQFSVGH----DGSHALLVAEDGS 593
Query: 131 VFSCGSSLCGVLGHGPETT-QCVSFT--RINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
VF GS+ G G ++ Q + ++ V + + ++ V + G+++
Sbjct: 594 VFFTGSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGSSSIVTKDGELYMF 653
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G ++ + D+ V LKG QV G T LT G V T G N GQ
Sbjct: 654 GKDAIYS----DSTCQ------VSDLKGHFVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQ 703
Query: 248 LGHGDT 253
G DT
Sbjct: 704 CGR-DT 708
Score = 66 (28.3 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 42/187 (22%), Positives = 75/187 (40%)
Query: 116 ITTGRYHTLL-ISNSSVFSCGS--SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
I GR L+ ++ ++ G SL G+ GP + + V P +VQ S
Sbjct: 525 IGAGREFALMKTASGKIYYTGKYQSL-GIKQGGPSSGKWVELPVTKSPK---IVQFSVGH 580
Query: 173 N--HAAFVLQSGQVFTCGDNSSFCCGHRDTNR--PI-FRPRLVEALKGVPCKQVTAGLNF 227
+ HA V + G VF G S G +R P ++P+ + L+
Sbjct: 581 DGSHALLVAEDGSVFFTGSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGS 640
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
+ +T G ++ G D + + ++ L+ V Q+A G ++ +T +
Sbjct: 641 SSIVTKDGELYMFGK---------DAIYSDSTCQVSDLKG-HFVTQVAMGKAHTCVLTKS 690
Query: 288 GVVYSFG 294
G V++FG
Sbjct: 691 GEVWTFG 697
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
G ++ LA G Y L HG Q P ++Q F R
Sbjct: 2635 GEAWSLARDRGGNQYLRHVEEQAVLEHGAQTPPPSPFSVQAFNR 2678
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
+ TD G +F F ++++ G D G
Sbjct: 1337 ITTDDGVVFQFKSSKKSNNGTDVNAG 1362
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 362 DKTLPEPLSSLKSHL 376
DK LP +S K HL
Sbjct: 2823 DKNLPAKVSPSKVHL 2837
>WB|WBGene00004457 [details] [associations]
symbol:rpm-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0050807 "regulation of synapse organization" evidence=IGI;IMP]
[GO:0040011 "locomotion" evidence=IGI] [GO:0043409 "negative
regulation of MAPK cascade" evidence=IGI] [GO:0031647 "regulation
of protein stability" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR027047 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
GO:GO:0018991 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0031594 GO:GO:0010171
GO:GO:0040011 GO:GO:0006351 GO:GO:0031647 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 GO:GO:0043409 InterPro:IPR012983 Pfam:PF08005
GO:GO:0050807 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 eggNOG:NOG240798 EMBL:FO080217 PIR:T29165
RefSeq:NP_505267.1 ProteinModelPortal:Q17551 SMR:Q17551
STRING:Q17551 PaxDb:Q17551 EnsemblMetazoa:C01B7.6 GeneID:179259
KEGG:cel:CELE_C01B7.6 UCSC:C01B7.6 CTD:179259 WormBase:C01B7.6
HOGENOM:HOG000016145 InParanoid:Q17551 OMA:LLSILHW NextBio:904596
Uniprot:Q17551
Length = 3766
Score = 141 (54.7 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 42/107 (39%), Positives = 56/107 (52%)
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF-TGFLTIRGHVHTCGSNTHGQLG 249
SS R T P R L + V V+ G NF T L V T GSN HGQLG
Sbjct: 743 SSTAAPQRSTLHPS-RVILSQGPHDVKVSSVSCG-NFHTVLLASDRRVFTFGSNCHGQLG 800
Query: 250 HGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
GDTL + TP+ I P + V +VQ+AAG ++ + +G V++FG+
Sbjct: 801 VGDTLSKNTPQQVILPSDTV--IVQVAAGSNHTILRANDGSVFTFGA 845
Score = 135 (52.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 37/106 (34%), Positives = 49/106 (46%)
Query: 306 QHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
Q L P R I + + V VS G+ H V L S V+T+G G LG GD + K
Sbjct: 749 QRSTLHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKN 808
Query: 365 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
P+ + + VQV A T + + GSV+ FG G G L P
Sbjct: 809 TPQQVILPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQLARP 854
Score = 58 (25.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 20/83 (24%), Positives = 31/83 (37%)
Query: 168 VSASENHAAFVLQSGQVFT-CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
V ++ V SG V+ +N G T R +++ L V + G +
Sbjct: 564 VPSNRRKIVHVCASGHVYGYVSENGKIFMGGLHTMRVNVSSQMLNGLDNVMISSLALGKS 623
Query: 227 FTGFLTIRGHVHTCGSNTHGQLG 249
+T GH+ T G N Q G
Sbjct: 624 HGVAVTRNGHLFTWGLNNMNQCG 646
Score = 56 (24.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
VS +N + ++ ++H V ++G +FT G N+ CG ++ PR
Sbjct: 602 VSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSPR 658
Score = 39 (18.8 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 339 DSSGYVYTWGKGYCGALGHG 358
+S+G T G CGA G G
Sbjct: 2519 NSNGKFTTGWSGECGAGGRG 2538
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 126 (49.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 63/240 (26%), Positives = 109/240 (45%)
Query: 240 CGSNTHGQLGHGDTLDRPTPK-SIAPLE-----EV-GSVVQIAAGPSYMLAVTGNGVVYS 292
CGSN + QLG + D+ + K ++ ++ EV G ++IA G ++ + + NG V+S
Sbjct: 7 CGSNGNYQLGINNDEDQNSLKVTLFDIDGTMSSEVPGKPMKIAGGGNHTMVILDNGEVFS 66
Query: 293 FGSGS-NFC-LGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
GS C L GE ++ F + G + +S G E + + SG VY G+
Sbjct: 67 CGSNEFGQCGLPRGE--------SLGVFHKVPGNDWLDISCGWEFSILVKRSGEVYVCGR 118
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LG G E ++ +++ ++ C + ++ T + G+G G LG
Sbjct: 119 GLKGELGLGKETPESELIYSTTVDGFKEIKSCMQHT---IIQTTNGLVGWGNSRKGQLGE 175
Query: 410 PDRGVSDKVL-RPRILDSLRAHHVSQ-ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
+ DK++ P+ +LR V + S G T + TD R+ FG + + T+
Sbjct: 176 TE----DKIMWTPK---TLRFGVVCKDFSLGREFTAIQTDTNRVKIFGKSSIKNIPESTV 228
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 46/186 (24%), Positives = 78/186 (41%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
++++ NH +L +G+VF+CG N CG R + +F + G ++ G
Sbjct: 46 MKIAGGGNHTMVILDNGEVFSCGSNEFGQCGLPRGESLGVFHK-----VPGNDWLDISCG 100
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLA 283
F+ + G V+ CG G+LG G + TP+S + V +I + + +
Sbjct: 101 WEFSILVKRSGEVYVCGRGLKGELGLG----KETPESELIYSTTVDGFKEIKSCMQHTII 156
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
T NG+V +G+ LG E P+ + R G+ S G E +
Sbjct: 157 QTTNGLV-GWGNSRKGQLGETEDKIMWTPKTL----RFGVVCKDFSLGREFTAIQTDTNR 211
Query: 344 VYTWGK 349
V +GK
Sbjct: 212 VKIFGK 217
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 126 (49.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 63/240 (26%), Positives = 109/240 (45%)
Query: 240 CGSNTHGQLGHGDTLDRPTPK-SIAPLE-----EV-GSVVQIAAGPSYMLAVTGNGVVYS 292
CGSN + QLG + D+ + K ++ ++ EV G ++IA G ++ + + NG V+S
Sbjct: 7 CGSNGNYQLGINNDEDQNSLKVTLFDIDGTMSSEVPGKPMKIAGGGNHTMVILDNGEVFS 66
Query: 293 FGSGS-NFC-LGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
GS C L GE ++ F + G + +S G E + + SG VY G+
Sbjct: 67 CGSNEFGQCGLPRGE--------SLGVFHKVPGNDWLDISCGWEFSILVKRSGEVYVCGR 118
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LG G E ++ +++ ++ C + ++ T + G+G G LG
Sbjct: 119 GLKGELGLGKETPESELIYSTTVDGFKEIKSCMQHT---IIQTTNGLVGWGNSRKGQLGE 175
Query: 410 PDRGVSDKVL-RPRILDSLRAHHVSQ-ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
+ DK++ P+ +LR V + S G T + TD R+ FG + + T+
Sbjct: 176 TE----DKIMWTPK---TLRFGVVCKDFSLGREFTAIQTDTNRVKIFGKSSIKNIPESTV 228
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 46/186 (24%), Positives = 78/186 (41%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
++++ NH +L +G+VF+CG N CG R + +F + G ++ G
Sbjct: 46 MKIAGGGNHTMVILDNGEVFSCGSNEFGQCGLPRGESLGVFHK-----VPGNDWLDISCG 100
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLA 283
F+ + G V+ CG G+LG G + TP+S + V +I + + +
Sbjct: 101 WEFSILVKRSGEVYVCGRGLKGELGLG----KETPESELIYSTTVDGFKEIKSCMQHTII 156
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
T NG+V +G+ LG E P+ + R G+ S G E +
Sbjct: 157 QTTNGLV-GWGNSRKGQLGETEDKIMWTPKTL----RFGVVCKDFSLGREFTAIQTDTNR 211
Query: 344 VYTWGK 349
V +GK
Sbjct: 212 VKIFGK 217
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 488 488 0.00081 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 220
No. of states in DFA: 613 (65 KB)
Total size of DFA: 280 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.05u 0.09s 37.14t Elapsed: 00:00:01
Total cpu time: 37.20u 0.10s 37.30t Elapsed: 00:00:01
Start: Fri May 10 03:34:30 2013 End: Fri May 10 03:34:31 2013
WARNINGS ISSUED: 1