BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011336
(488 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I+ G H++ L+S V S G G LGHG + S T+++ +V V+ +H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78
Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
QSG +V++ G GH +++ +F P ++AL G+ KQ+ G + +T+
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V + G N +GQLG GDT D P+ I E + + +AAG + AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G G LG G++ D L P + + G + V+ G H +++ SG +YT+G G
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254
Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LGHGD D +P L +L + Q+ R T L G +YG+GW FG +G +
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
++ R D + V Q+S G HT+ VT+R +F +G QLG
Sbjct: 315 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
++AG + + L V + G GQLGHGD DRP+P ++ L+ +V + G +
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78
Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+A + +G+ VYS+G G LGHG D P I+ GI + +++ GD H +A+
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
G V +WG+ G LG GD D +P+ + + + V A T + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 196
Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
GW +G+LG DR +D+++ R+ S +S ++ G HT+ V+ G L+ +G ++
Sbjct: 197 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253
Query: 460 AQLGHDTLRGCLEPTEI 476
QLGH L L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
QI G H L ++ V S G + G LG G +T + +I + V+A
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H A V + G ++ G G D T+R + P V + G V G T ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 240
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G ++T G + +GQLGHGD D P + L + QI+ G + +A+T +G +Y
Sbjct: 241 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 299
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
+G +G G D+ P +Q VV+VS G H +A+ V+ WG+G
Sbjct: 300 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Query: 353 GALGHGDEIDKTLPEPLSSL 372
G LG G+ +D+ P+ + +L
Sbjct: 358 GQLGIGESVDRNFPKIIEAL 377
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
V+ +SAG H VAL S V +WG+G G LGHGD D+ P LS+L H V V
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 76
Query: 385 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
T +G VY +GW FG LG G S + P + +L + QI+ G H +
Sbjct: 77 DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 133
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
VT G + +G N+ QLG L P +I
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)
Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G HT ++ + ++ G G LG G T + V R+ + V+ H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
V SG ++T G + GH D + P +EAL Q++ G T LT
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G ++ G N GQ+G G+ LD+ +P + P ++ VVQ++ G + LAVT V+++
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 352
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
G G+N LG GE D P+ I+ G
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEALSVDG 381
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
+ G HT+ +S S ++++ G S G LGHG + ++ S + + Q+S H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287
Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
+ G+++ G N G + D P+ + R + K V QV+ G T +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
T R +V G T+GQLG G+++DR PK I L G+ Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)
Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
C G+ +P + P++ + K+V G N + FL G V+TCG N
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
T GQLGH ++P E++G+ ++ +A G S+ LA++ G ++S+G+GS+
Sbjct: 62 TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
LG D + PR IQ ++ I ++VS G+ H +AL + G +TWGK G LG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
G E + P+ + SL+ QV A +F L +G+V+G+G G LG D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
P + LR V IS G HT V+T G +F FG QLGHD++ + P +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Query: 477 F 477
Sbjct: 289 L 289
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)
Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
F S V +V+ NH+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
V G + + L+ RG + + G+ + GQLG T D P+ I L + +++Q++
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + LA+ +G +++G S+ LG G++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
AL SG V+ WG G LG DE D+ P + L++ V + + T VL +G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
V+ FG G LG ++D+V PR + L V+QI+ G HT+ V G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 455 GDNERAQLG 463
G R QLG
Sbjct: 320 GCGARGQLG 328
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
G + L+ + V++CG + G LGH E + +I + H++ V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
GQ+F+ G S G T + PRL++ L QV+ G L G
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
T G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ +G V+ +G +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
LG ++ D P ++ R + VV +S G+EH L SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
D+ P + L Q+ C R+ + +G +Y FG G LG G +
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333
Query: 417 KVLRPRILDSLRAHHVSQIS 436
V P + A H Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)
Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
+ + G H+L +S+ +FS G+ G LG T V+ R I + ++QVS
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
G LG G + P P+ K H+ Q+ + +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
L+ ++V ++ G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
I +V+V+ G H +AL + V+ WG+ G LG G E K T P+ + SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G E +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
P+ I++ GI ++V+AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
L+S V +C + T L G V+ FG G+G LG + + PR + L
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295
Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
V+QI+ G HT V GR++ FG QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R+ ++ + +V++CG + G LGH + ++ A ++V VS E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100
Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
G N +GQLG G + T P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
LG +++D P +++ R + I V + G++H AL G V+T+G G G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
+ P + L + Q+ C R+ + + +G +Y FG G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
+S + +V A N+ ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304
Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S +S VF G + G LG G E + S I +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V QIA G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V++CG+ N G PI PR + AL
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019
Query: 243 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LGH + + +PR I+ + K I ++ G H AL SSG +YTWG G G LGHGD
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137
Query: 361 IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
+ P+ + L H +QV +R +T L D G V+ +G FG LG RG S+
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194
Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
P+ ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V V++ H + G+V++ G+ GH + + P RPR++E+L+G+ V AG
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
+ +T G ++T G +G+LGH D+ D+ PK + L+ V+ IA +G + L
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+T + V+S+G G LG G P I + G+ VV+V G + VAL SG
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
VYTWGKG LGHG + P + L+ + + + G VY +G
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
G LG G ++ + RPR++ +L+ V++++ G HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)
Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
P L+E+++ V K+V +G L+ G V++ G G+LGHG+ P+ I
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
L + VV +AAG ++ VT G +Y++G G LGH + D+L+P+ ++ + +
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
+ +GD + L V++WG G G LG G +P + SL V+V
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208
Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
+ + L +G+VY +G + LG G D V RPR + L+ V I+TG H V
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
T+ G ++ +GDN+ QLG T P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V+QV+ +E + ++G+V+T NS + P+LV+ L ++ A
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ +G V++WG G G LG G P+ + L+ ++V + + L G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 458 ERAQLGHDTLR 468
++ Q DTLR
Sbjct: 738 DQCQ-HFDTLR 747
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)
Query: 96 FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144
Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
+ +G T LT V + G +G+LG G + P I L +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
+ G + +A+T +G VY++G G LGHG +PR +Q +G V+ ++ G
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261
Query: 334 HVVALDSSGYVYTWGKGYCGALGHG 358
H V G VYTWG G LG G
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129
Query: 412 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V I+ +G T+ +TD ++ +GD + +LG G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4187 CKVPMKI 4193
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R G +V V+ G H +A+ SG VY WG G G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Query: 357 HG 358
+G
Sbjct: 3292 NG 3293
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
S +IV+ +A + G ++ L + V+S G G LGHG P+ S
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
+ + HVV ++ ++A + G+++T G + GH + P LV LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 603
Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
+ V G L + G V + G +G+LG G + TPK I L+++ V++
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 662
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
+ G + +A+T +G VYS+G G N LGHG + P+ ++ +G V+ V+AG
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 720
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
H +AL V++WG H D + T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 753
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163
Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL L + +V+S G G LG G + C +I+ + VV+V +
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ +SG V+T G GH + + RPR V+ L+G + G T G
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
V+T G N GQLG G T P+ +A L+ V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+G+ G G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 344 VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
V+ WG LG G +I + E LS+L VQV + F + G VY G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018
Query: 401 WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
G LG G+S V PR + +L ++ V +++ +G H +T G++F +G+
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 458 ERAQLGHDTLRGCLEPTEI 476
+ +LGH + C +P I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
L+ ++V +A G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
I +V+V+ G H +AL + V+ WG+ G LG G + K T P+ + SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
R +F V V H FVL G V+TCG N GH + + +P V AL
Sbjct: 27 RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
V G T L +G V+ G ++ GQLG G P++I L ++ +VQ+
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
A G + LA++ V+ +G LG G + + P+ I++ GI ++V+AG
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
H L SG ++ WG+ G LG DE D+ +P L SL+S V +C + T L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
G V+ FG G+G LG + + PR + L V+Q++ G HT V GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317
Query: 453 GFGDNERAQLG 463
FG QLG
Sbjct: 318 SFGLGGNGQLG 328
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R+ ++ + +V++CG + G LGH + ++ A ++V V+ E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100
Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
G N +GQLG G D + +P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
LG +++D P +++ R + I V + G++H AL G V+T+G G G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
+ P + L + QV C R+ + + +G +Y FG G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
+S + +V A N+ + G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304
Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S +S VF G + G LG G + + S I +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V Q+A G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047
Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281
Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
GDN+ Q G+ T +PT +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
+VF G N G ++ I P E L + QV G +T+ G V+ CG
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018
Query: 243 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LGH + + +PR I+ + K I ++ G H AL SSG +YTWG G G LGHGD
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 361 IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
+ P+ + L H +QV +R +T L D G V+ +G FG LG RG S+
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193
Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
P+ ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V V++ H + G+V++ G+ GH + + P RPR++E+L+G+ V AG
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
+ +T G ++T G +G+LGH D+ D+ PK + L+ VV IA +G + L
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+T + V+S+G G LG G P I + G+ VV+V G + VAL SG
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
VYTWGKG LGHG + P + L+ + + + G VY +G
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
G LG G ++ + RPR++ +L+ V++++ G HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)
Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
P L+E+++ V K+V +G L+ G V++ G G+LGHG+ P+ I
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
L + VV +AAG ++ VT G +Y++G G LGH + D+L+P+ ++ + +
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
+ +GD + L V++WG G G LG G +P + SL V+V
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206
Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
+ + L +G+VY +G + LG G D V RPR + L+ V I+TG H V
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
T+ G ++ +GDN+ QLG T P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V Q++ +E + ++G+V+T NS DT P+LV+ L ++ A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501
Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ +G V++WG G G LG G P+ + L+ V+V + + L G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Query: 458 ERAQLGHDTLR 468
++ Q DTLR
Sbjct: 737 DQCQ-HFDTLR 746
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)
Query: 96 FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
L+S++H ++ A N + G++ L S V+S G + G LGHG + C
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
I VV V+A H+A V +G ++T G GH D+ + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142
Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
+ +G T LT V + G +G+LG G + P I L +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
+ G + +A+T +G VY++G G LGHG +PR +Q +G V+ ++ G
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259
Query: 334 HVVALDSSGYVYTWGKGYCGALGHG 358
H V G VYTWG G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)
Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127
Query: 412 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
S+ L+P+++++L+ H V I+ +G T+ +TD ++ +GD + +LG G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 470 CLEPTEI 476
C P +I
Sbjct: 4185 CKVPMKI 4191
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232
Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
F LGHG +P+ ++ R G +V V+ G H +A+ SG VY WG G G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Query: 357 HG 358
+G
Sbjct: 3291 NG 3292
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L +Q+ + +SRN ++ + + + +Q + S +IV+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498
Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
+A + G ++ L + V+S G G LGHG P+ S + +
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
HVV ++ ++A + G+++T G + GH + P LV LKG+ V
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609
Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
G L + G V + G +G+LG G + TPK I L+++ VV++ G +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+A+T +G VYS+G G N LGHG + P+ ++ +G V+ V+AG H +AL
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
V++WG H D + T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
V QIA L ++ NG VY+ S D L P+ +Q + I + +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
H +AL ++G VY+WG G G LGHGD + P+ +S+ A V +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
+ + G +Y +G +G LG G S+ P ++ L+ V ++ +G T+
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619
Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
VT+ G+++ +GD + +LG GC P I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162
Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL L + +V+S G G LG G + C +I+ + VV+V +
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ +SG V+T G GH + + RPR V+ L+G + G T G
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269
Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
V+T G N GQLG G T P+ +A L+ V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
VH+ GSN Q H DTL +P P ++ L + +V IA GP+ A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G +Y G+G+ G G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
++ +G+ E +LGH C P I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 344 VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
V+ WG LG G +I + E LS+L VQV + F + G VY G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 401 WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
G LG G+S V PR + +L ++ V +++ +G H +T G++F +G+
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 458 ERAQLGHDTLRGCLEPTEI 476
+ +LGH + C +P I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)
Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
L+ ++V ++ G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
I +V+V+ G H +AL + V+ WG+ G LG G + K T P+ L SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 13/333 (3%)
Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121
Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
P++I L ++ +VQ+A G + LA++ V+ +G LG G +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
P+ +++ GI ++V+AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
L+S V +C + T L G V+ FG G+G LG + + PR + L
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295
Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
V++I+ G HT V GR++ FG QLG
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R+ ++ + +V++CG + G LGH + ++ A ++V VS E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100
Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
G N +GQLG G D + +P+ + L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
LG +++D P +++ R + I V + G++H AL G V+T+G G G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
+ P + L + ++ C R+ + + +G +Y FG G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 98 QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
+S + +V A N+ ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127
Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187
Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
I G + A+T G V++FG+G LGH E+ PR + F G V ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304
Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+Q+ G YH+L +S +S VF G + G LG G + + S + +QV+A
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
H+ + SG +F G N G D N + P L+++L+ + G + T LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
G V T G+ +GQLGH T P+ + E +GS+V +IA G + A V +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
YSFG G N LG G + P ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
+T G + T G+ +G+LG G+T ++ P+ + LE ++G Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205
Query: 289 -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
+V++FG G LG G + P+ I GI + +V+ G + VAL G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
G+ L G + P+ + L + V T L G VY +G G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
G G ++ V P ++ L+ +V QIS G H+ T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)
Query: 96 FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
F + +SD T A I TG ++ V+ GS+ L G TQ
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395
Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
PS + + A + + G V CG S G D+N + F P
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454
Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
++K V + + G T T G V + G +G+LGHG++ + PK I +
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
VV ++AG + AVT +G +Y++G G LGHG+ + R I T + +V VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567
Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
G H +AL G V+++G G G LGHGD P+ + +L+ +VCA + +
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627
Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
L TG VY +G +G GS LRP++++ L A + +S G H + +
Sbjct: 628 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLAL 680
Query: 446 TDRGRLFGFGDNERAQLGH 464
+ ++ +G+N Q G
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)
Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
HTL + VFS G G LGHG +TQ VV VSA H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
G+++T G+ GH D+N R I P LV+ + V +V+ G + T L+ G V
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584
Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
+ G +G+LGHGDT PK I L+ + + ++ AG LA+T G VY++G G+
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642
Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
CLG G + L+P+ I+ +V VS GD H +AL VY WG G G
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
G+ T P+ +S L Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)
Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081
Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198
Query: 336 VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
+A+ + G V+ +G G G LG G+ K+ P+ + L +V + + L G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
VY FG +G P+ G + RP+ + L + ++ G HT+ + G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315
Query: 455 GDNERAQLGHDTLRGCLEPT 474
G N QLG EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 237 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
V+ G+ HGQL G + P + AP Q+ G + + NG V + G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
GS LG G D I + + + S G D H +AL SG V++WG G G
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
LGHG+ + P + +L+ VQ+ + + V+ G ++ FG +G LG +
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171
Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
S+K L P + +L + + Q++ GL HT+ V+ G + + FGD + +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
L S V++ G C LG G + I +A +V VS ++H + +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686
Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
+ G+NS CG ++ PI +P+ V L G+ +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
VY WG G G L E + + P ++ A QV + TFV+ G+V G
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
+G LG +G SD + ++ +L+ V+Q+ T H++ +T+ G +F +GD +
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 461 QLGHDTLRGCLEPTEIFIQEMEE 483
+LGH P +I + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
S+++ G + G LG G E ++ + T S VQ++ E V G++F G
Sbjct: 4049 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4107
Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
S G ++ P L+ +L+ V K+V +G LT G V+ G G
Sbjct: 4108 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
+LGHG+ + PK + L + SV IA G ++ A+T +G V ++G G LGHG+
Sbjct: 4167 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4225
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
D+L+P+ ++ + +GD + + V++WG G G LG G LP
Sbjct: 4226 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4285
Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
+ SL V+V + + L +G+VY +G F LG G D V RP+ + +
Sbjct: 4286 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4342
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
L+ + I+TG H V +D G ++ +GDN+ QLG T+ P
Sbjct: 4343 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4389
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
V V++ H + G+V+ G+ GH NR + RP+LVE L G+ + G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4196
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
+ +T GHV T G +G+LGHGD+ D+ PK + L ++ + +G + L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+T + V+S+G G LG G P I++ G+ VV+V G + VAL SG
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4314
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
VYTWGKG LGHG P+ +++L+ + + D+G VY +G
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4374
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
G LG G + RPR++ +L+ H+ +++ G HT+ ++
Sbjct: 4375 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 159/338 (47%), Gaps = 17/338 (5%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VS 169
+ I G ++S + V++CG G LG G T V +VV+ V
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVH 3079
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
+ HA + G+VF+ G+ GH NR +PRLVEAL+ + V G + +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
++ +G ++T G +G+LGHGD + PK + L VVQ+A G + LA+T
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 3196
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
+G V+S+G G LG G P I+ R GI VV++ G + +AL +G V+T
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3254
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
WGKG LGHG + P+P+ L+ + V + D G VY +G G
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314
Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
G + V+ K P ++ L A V++++ G H++
Sbjct: 3315 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3349
Score = 115 bits (287), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 17/294 (5%)
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
V Q G+V+ CG+ ++ G T N P+ P + L+ K+V +G LT+
Sbjct: 3033 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLRQYVVKKVAVHSGGKHALALTL 3090
Query: 234 RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G V + G G+LGHG+ TLD+P + + +A G S+ A++ G +Y
Sbjct: 3091 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 3147
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 349
++G G LGHG+ +L+P+ + G VV+V+ G D +AL G V++WG
Sbjct: 3148 TWGLGEYGRLGHGDNTTQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LG G P + L VQ+ + + L G V+ +G + LG
Sbjct: 3206 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3264
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
G V +P+ + LR V ++ G H + VTD G+++ +GDN+ Q G
Sbjct: 3265 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 15/269 (5%)
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
++ G GH DT+ P + AL+ + V G +++ +T G++ T G
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 695
Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
T+ +LGHG++ DR P + L + V V + +G ++ LA+T G+V+++G G LG
Sbjct: 696 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 755
Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
+G + LQP +++ R V RV AG + VAL S G +YTWGK C LGH ++
Sbjct: 756 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH-QLVE 808
Query: 363 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
+ ++P +SSL+ V V L +G V+G+G + P S+
Sbjct: 809 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 867
Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVT 446
+LR IL SL S I+ ++V T
Sbjct: 868 LLRTPILVSLPTFPASGIACTSAQSLVWT 896
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 14/284 (4%)
Query: 113 NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
+ + +G H L L + V++ G G LGHG +S+ R + + V +
Sbjct: 4138 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 4193
Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
+ H+A + SG V T G GH D+ + RP+LVEAL G + G
Sbjct: 4194 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4252
Query: 229 GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
L I +V + G +G+LG G + P I L +G VV++ G + +A+T
Sbjct: 4253 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTK 4311
Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
+G VY++G G LGHG +P+ + +G ++ ++ G H VA SG VYT
Sbjct: 4312 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 4369
Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
WG G LG G P +++L+ V+V T L
Sbjct: 4370 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 12/245 (4%)
Query: 237 VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
V G N QLG G + PT ++I+ L + IA G + V+ +G VY+
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3043
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G G+N LG G H+ P + R+ + V V +G +H +AL G V++WG+G G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
LGHG+ P + +L++ V + + G +Y +G +G LG D
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 3163
Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
L+P+++ +L V Q++ G T+ +T+ G +F +GD + +LG G
Sbjct: 3164 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3220
Query: 472 EPTEI 476
P EI
Sbjct: 3221 TPHEI 3225
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)
Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
FL I + ++ G+ +LGHGDT R P IA LE+ V + G SY A+T
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
G + ++G G+ LGHG D P + + V + +GD H +AL S G V+ W
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746
Query: 348 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
G G G LG+G+ + L E L ++ +V A + + L G +Y +G
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSVALSSEGQLYTWGKATC 801
Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
+R V + PR++ SL+ + ++ + H + ++ G +FG+G N+ Q+
Sbjct: 802 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)
Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
L++ G TI G H N GQLG G + PTP ++++ L V Q+A G
Sbjct: 4042 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4093
Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
+ AVT +G +++ G GS LG G P + + + + V V++G +H +AL +
Sbjct: 4094 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153
Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
G VY WG+G G LGHG+ + P+ + L + + + +G V +G
Sbjct: 4154 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4213
Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
+G LG D S+ LRP+++++L + I+ +G T+ +TD ++ +GD +
Sbjct: 4214 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270
Query: 459 RAQLGHDTLRGCLEPTEI 476
+LG GC P +I
Sbjct: 4271 YGKLGRGGSDGCKLPYKI 4288
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
+ Q+A + ML ++ G +Y++ E +P ++ +
Sbjct: 574 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHDVFISIAGHC 623
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
H +A+DS+ Y+WG G LGHGD + +P +++L+ H V + +
Sbjct: 624 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683
Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR 448
G++ +G + LG G SD P ++ +L H V ++ +G H++ +T
Sbjct: 684 TCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740
Query: 449 GRLFGFGDNERAQLGHDTLRGCLEP 473
G +F +GD + +LG+ G L+P
Sbjct: 741 GLVFAWGDGDYGKLGNGNCNGSLQP 765
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
D+ ++ + +Y WG + G LG + P P +L VQ+ ++ F +
Sbjct: 4039 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4098
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
G ++ G+GS G G SD P +L SL+ V +++ +G H + +T G
Sbjct: 4099 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4155
Query: 450 RLFGFGDNERAQLGH 464
++ +G+ E +LGH
Sbjct: 4156 EVYAWGEGEDGKLGH 4170
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)
Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
+PR ++A G+ Q +G + + L V++CG N+ GQLG P+ I
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70
Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
L ++ V ++ G + +AV G V+++G+GS LG GE + P I+ GI
Sbjct: 71 LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127
Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 382
+++VS G H +AL G+V++WG+ G LG G + + +P+ + SL+ QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
+F L TG+ +G+G G L V +++ +P + +L+ V IS G HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247
Query: 443 VVVTDRGRLFGFGDNERAQL 462
V+T+ G++F FG N QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 27/301 (8%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
+Q +G +H+LL+ SN V+SCG + G LG PE Q ++ HV
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
VS + H+ V G+VF G S G + F P ++AL G+ QV+ G
Sbjct: 77 DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+ L+ GHV + G N+ GQLG G ++ + P+ + LE + + Q+AAG ++ A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195
Query: 285 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
+ G SFG GSN L + +++ +P +I K + V+ +S G EH L
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251
Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
G V+T+G G L + P+ + + ++ CA + TG V
Sbjct: 252 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSL 311
Query: 400 G 400
G
Sbjct: 312 G 312
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 14/301 (4%)
Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
S ++Q ++ E+H+ + + +V++CGDNS G R ++ RP ++AL +
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
V+ G + + +G V G+ + GQLG G+ + P I L + ++Q++ G
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137
Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
+ LA++ +G V+S+G S LG G+ + P+ +++ +GI + +V+AG H AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195
Query: 339 DSSGYVYTWGKGYCGALG-HGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGS 395
+G + WG G L G+++ + + +P + +LK+ + + T VL + G
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
V+ FG G L R P++++ + VSQI YHT+ V G++
Sbjct: 256 VFTFGGNSSGQLQPSPRSGQRG---PQLIEGI-GGRVSQIECASYHTIAYVYTTGQVVSL 311
Query: 455 G 455
G
Sbjct: 312 G 312
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQV 380
GI +++ ++G+ H + L S+ VY+ G G LG + PEP+ +L H+ +
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS 80
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
C K + + G V+ +G G LG + + P + +L + Q+S G Y
Sbjct: 81 CG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHY 137
Query: 441 HTVVVTDRGRLFGFGDNERAQLG 463
H++ +++ G +F +G N QLG
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLG 160
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
G Q +G + L V +CG N+ GQLG P+ I LE + V +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 333
+ G + LAV G V+++G+GS LG GE + P+ I T I +++VS G
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
H +AL V++WGK G LG G E + P+ + SL+ QV A +F L
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
G+ +G+G G L R V + +P + +L+ V IS G HT V+T G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 453 GFGDNERAQLGH 464
FGDN QLG+
Sbjct: 259 TFGDNRSGQLGY 270
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A ++Q ++ E H+ +L + +V +CGDNS G R R P ++AL+ + V+
Sbjct: 23 AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
G + + +G V G+ + GQLG G+ + TPK I L ++ ++Q++ G +
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
LA++ + V+S+G S+ LG G++ + P+ +++ +GI + +V+AG H AL
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198
Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
G + WG G L G + P + +LK+ V + T VL G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
FG G LG+ P++ V R +D L VSQI G YHT+ V G++
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311
Query: 454 FG 455
FG
Sbjct: 312 FG 313
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)
Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
+Q +G H+LL+ +N V SCG + G LG PE Q + ++
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
VS + H+ V G+VF G S G + F P+ + L + QV+ G
Sbjct: 80 --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+ L+ V + G N+HGQLG G + +P+ + LE + + Q+AAG ++ A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
+ G + +GS S L ++ +Q + + K + VV +S GD H L G
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
V+T+G G LG+ +K P+ + + ++ C + TG V FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
++T V G N LG GD PK + L +++ S+ +GP ++L T +
Sbjct: 36 YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
GVVY++G LG+G + + P + T V+ V+ G H +AL + G ++ W
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152
Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
G CG +G G ++ P +++ L + V + + + ++D+G VYG+G+ G G
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212
Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
LG + G L P + +L V+QI G HT+ +TD G L+ +G N QLG +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269
Query: 467 LRGCLEPTEIFIQE 480
L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)
Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
S N A +V + +VF G N S C G D N+ P+ +EAL G K ++ G
Sbjct: 30 SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88
Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
LT G V+ G N + QLG+G T P + + V+++A G + +A+ +G
Sbjct: 89 LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
++++G + +G G ++ PR + VV ++ G +A+ SG VY WG
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G LG G+ ++ P +++L Q+ T L D G +Y +G +G LG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266
Query: 410 PDRGVSDKVLRP 421
G + +L P
Sbjct: 267 --TGSKNNLLSP 276
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)
Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
T+ + N VF G + LG G + V ++ + +S S H
Sbjct: 29 TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87
Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
+ G V+ G N G+ TN+ I ++ L +V G + + L G
Sbjct: 88 LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
+ G N GQ+G G T ++PTP+ + VV IA G + +AV +G VY +G
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
N LG G ++L P + G+ V ++ G H +AL G +Y WG G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265
Query: 356 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
G G + + P + K + + C + G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ +F+ G + CG +G G Q N VV ++ +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL SG+V+ G N + G N P V AL G+ Q+ G T LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
G ++ G+NT+GQLG G + +P I + E V++IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307
Query: 291 YSFG 294
Y +G
Sbjct: 308 YMWG 311
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 207 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++ KG +QV AG +T+ ++T GS HGQLGHGD PK
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400
Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 318
+ L+ SV +++ G + + +T G +YSFGS CLG + + L+P + F
Sbjct: 401 HVEKLQG-KSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
+ + +VS GD H++AL S VY+WG G G LG E D P+ + + V
Sbjct: 460 LNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIV 517
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 428
VC +F+L TG V G LG ++ + + + L
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577
Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + IS G HT + +RGRL FG N+ QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 366
P+ + F+ G +V AGD H + +YTW G G LGHGD P
Sbjct: 341 PQKLDVFK-GGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399
Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
+ + L+ +V T + D G +Y FG +G LG ++ +VL P ++D
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDF 458
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 479
V Q+S G H + +T ++ +G E +LG D+ P ++ +Q
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 34/304 (11%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G T+ I++ ++S GS G LG + ++ + ++F V QVS +
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
+H + +S V++ G CG D+ ++ P+ VE +G+ V G +
Sbjct: 472 SHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDG 525
Query: 228 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 275
+ LT+ G V CG N H +LG H + P S+ +++ + I+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585
Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
G ++ A+ G + +FGS LG G+ L + G V+RVS GDE
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFT 644
Query: 336 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
A + +++ WG G G L G +I + P P+ H+ C R T
Sbjct: 645 TAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSC-RGWHTI 703
Query: 389 VLVD 392
++V+
Sbjct: 704 LIVE 707
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
+ L+ ++ Q++ G + + VT G +Y+FGS C+G + + L+P + F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
+ +VS GD HVV L + VY+WG G G LG E D P+ + K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
V TF+L +G V G F LG G+ + + L
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
+NH + ++ +V++ G CG D+ + P+ V+ K + V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
+ T LT G V CG N +LG H + P S +++ +
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
IA G ++ A+ G + +FG LG G L + G V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659
Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
E +A +++ WG G G L HG +I + P P+ H+ C R
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718
Query: 386 KTFVLVD 392
T ++V+
Sbjct: 719 HTILIVE 725
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
+ G +V AG+ H + +YTW G G LGHGD+ P+ + L+
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
QV T + D G +Y FG +G +G D+ +VL P L+ ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
+S G H VV+T ++ +G E +LG D+ P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
+ + QVS ++ V GQ++ G + C G P + P +
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
P +QV+ G N LT V++ G +G+LG D TP+ + P +
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
VQ +++L +G + G N C+ H H+ + ++
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594
Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
+ +R ++ G H A+D G + T+G CG LG G+ + L L ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
V T D ++ +G G G L + RP I SL HHV
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711
Query: 434 QISTGLYHTVVVTDR 448
+S +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 156/388 (40%), Gaps = 47/388 (12%)
Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
N R T+ + +V + +S V G G T Q + + S QV A
Sbjct: 323 NAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGN 378
Query: 173 NHAAFVLQSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLN 226
H A V +++T G GH D + +R P+ VE L+G +QV+ G +
Sbjct: 379 THFAVVTVEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDD 436
Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYM 281
FT +T G ++ GS+ +G +G +D+ P+ + P++ V Q++ G +++
Sbjct: 437 FTVCVTDEGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
+ +T N VYS+G G LG + D P+ + K + +V V G + L S
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQS 550
Query: 342 GYVYTWGKGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTF 388
G V G LG E+ T L+ S ++ A K T
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610
Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 447
+ + G + FG G LG G K L +L L V ++S G T+ TD
Sbjct: 611 AIDERGRLLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667
Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTE 475
+F +G+ +L + PTE
Sbjct: 668 DNHIFAWGNGGNGRLA-------MTPTE 688
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
V + VY WG G K+ P+ L +KS A QVCA V+
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
+Y + M G+ G DK +P+ ++ L+ + Q+S G TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 447
Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
+ FG + +G D + G LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)
Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
++T V G N LG GD PK + L +++ S+ +GP +L+ T +
Sbjct: 36 YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
GVVY++G LG+G + + P + T VV V+ G H +AL + G V+ W
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152
Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
G CG +G G ++ P +++ L V + + + ++D G VYG+G+ G G
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
LG + G L P + +L + V+QI G HT+ +TD G L+ +G N QLG
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269
Query: 467 LRGCLEPTEIFIQE 480
L P I +++
Sbjct: 270 KNNLLSPAHIMVEK 283
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 14/263 (5%)
Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
A V SASE A +V + +VF G N S C G D N+ P+ +E L G K ++
Sbjct: 24 ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80
Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
G L+ G V+ G N + QLG+G T P + + VV++A G +
Sbjct: 81 YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHS 140
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVAL 338
+A+ +G V+++G + +G G ++ PR + +H+ RV + G +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAV 196
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
+G VY WG G LG G+ ++ P +++L S Q+ T L D G +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 399 FGWMGFGSLGFPDRGVSDKVLRP 421
+G +G LG G + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
H + G V+ G N G+ TN+ I ++ L +V G + + L
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V G N GQ+G G T ++PTP+ + + VV IA G + +AV NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G N LG G ++L P + + V ++ G H +AL G +Y WG G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263
Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
LG G++ + P + K + + C + G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+++ G +H++ L ++ VF+ G + CG +G G Q N VV ++ +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+ VL +G+V+ G N + G N P V AL V Q+ G T LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
G ++ G+NT+GQLG G+ + +P I + E VV+IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307
Query: 291 YSFG 294
Y +G
Sbjct: 308 YMWG 311
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
+ L+ ++ Q++ G + + VT G +Y+FGS C+G + + L+P + F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFF 477
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
+ +VS GD HVV L + VY+WG G G LG E D P+ + K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 535
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
V TF+L +G V G F LG G+ + + L
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
+NH + ++ +V++ G CG D+ + P+ V+ K + V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 540
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 272
+ T LT G V CG N +LG + + P S +++ +
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
IA G ++ A+ G + +FG LG G L + G V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659
Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
E +A +++ WG G G L HG +I + P P+ H+ C R
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718
Query: 386 KTFVLVD 392
T ++V+
Sbjct: 719 HTILIVE 725
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 147/375 (39%), Gaps = 28/375 (7%)
Query: 98 QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
+S D++++ Q+ G H +++ +++ G+ L G LGHG + +
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414
Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
+ + QVS ++ V GQ++ G + C G + P + P +
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQL 474
Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
P +QV+ G N LT V++ G +G+LG D TP+ + P +
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALII 534
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
VQ +++L +G + G N C+ H H+ + ++
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594
Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
+ +R ++ G H A+D G + T+G CG LG G+ + L L ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
V T D ++ +G G G L + RP I SL HHV
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711
Query: 434 QISTGLYHTVVVTDR 448
+S +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
+ G +V AG+ H + +YTW G G LGHGD+ P+ + L+
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
QV T + D G +Y FG +G +G D+ +VL P L+ ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQ 484
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
+S G H VV+T ++ +G E +LG D+ P + +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 528
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)
Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
+++T G GH D + +R P+ VE L+G QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443
Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
G ++ GS+ +G +G +D+ + P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
VYS+G G LG + D P+ + K + +V V G + L SG V G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Query: 349 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
LG E+ T L+ S ++ A K T + + G
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617
Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
+ FG G LG G K L +L L V ++S G T+ TD +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674
Query: 455 GDNERAQLGHDTLRGCLEPTE 475
G+ +L + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 394
V + VY WG G K+ P+ L +KS A QVCA V+
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 388
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
+Y + M G+ G DK +P+ ++ L+ + Q+S G TV VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLY 448
Query: 453 GFGDNERAQLGHDTLRG--CLEPTEI 476
FG + +G D + G LEP ++
Sbjct: 449 AFGSDYYGCMGVDKVSGPEVLEPMQL 474
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N +F G++ CG LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T+++P P+ + + VV IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ QP + +GI V RV+ G H + L G VY WG G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
P++ K + + C + G VY +G
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90
Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ L + + + +GP +LA T G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 378
V+ V+ G H + L S G V+ WG G +G G +++ +P ++ L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
+ + +VDTG VY +G+ G G LG + G R L +R V +++ G
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
N + + ++F G N C G D I PR +++L G + C +G +
Sbjct: 56 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
+++G ++ +G G ++ PR + + + VV ++ G +A+ +G VY WG
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G LG G+ ++ P +++L+ +V T VL D G VY +G +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 5/275 (1%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N +F G++ CG LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T+++P P+ + + VV IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS 242
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ QP + +GI V RV+ G H + L G VY WG G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
P++ K + + C + G VY +G
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90
Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
+ L + + + +GP +LA T G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148
Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 378
V+ V+ G H + L S G V+ WG G +G G +++ +P ++ L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208
Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
+ + +VDTG VY +G+ G G LG + G R L +R V +++ G
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
N + + ++F G N C G D I PR +++L G + C +G +
Sbjct: 56 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
+++G ++ +G G ++ PR + + + VV ++ G +A+ +G VY WG
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G LG G+ ++ P +++L+ +V T VL D G VY +G +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 12/283 (4%)
Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
PIF E L+ + C TAG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGTAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90
Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
+ L +++ S+ +GP +LA T +G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 377
V+ V+ G H + L S G V+ WG G +G G ++ +P ++ L++ +
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
+ + + + +VDTG VY +G+ G G LG G R L +R V +++
Sbjct: 208 MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264
Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
G HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 5/275 (1%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N +F G++ G LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++P P+ + + V+ IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ QP + +GI V RV+ G H + L G +Y WG G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300
Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
P+ K + + C + G VY +G
Sbjct: 301 TPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 3/237 (1%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
N + + ++F G N S C G D I PR +++L G ++ G L
Sbjct: 56 NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 114
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
++G ++ +G G ++ PR + + + V+ ++ G +A+ +G VY WG
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMSIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G LG G ++ P +++L+ +V T VL D G +Y +G +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 290
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 15/300 (5%)
Query: 168 VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
+S + H A V + +++ G N+ G + T + +P V+ALK K G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST---VSKPTCVKALKPEKVKFAACGR 96
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N T T G V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
+G ++ +G S +G + P+ + G + +S G H + + G +Y
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLY 212
Query: 346 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
T+G+ CG LG ++ ++ +P+P+ + + VQV T VL + +VY FG
Sbjct: 213 TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV-VQVACGGGHTVVLTEK-AVYTFGLGQ 270
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
FG LG V P+ ++ ++ +S I+ G HT ++TD G ++ FGD +LG
Sbjct: 271 FGQLGLGTFLFETSV--PKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 118/247 (47%), Gaps = 18/247 (7%)
Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASENHAA 176
GR HTL+ + V++ G + G LG G +T + +F I+F S + Q+SA N +A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + G++F GDNS G + + P+ V G P ++ G + F+T G
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTN-VCVPQQVTV--GKPISWISCGYYHSAFVTTEGQ 210
Query: 237 VHTCGSNTHGQLGHGDTL----DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
++T G G+LG + L P P P G VVQ+A G + + +T VY+
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIP----GKVVQVACGGGHTVVLT-EKAVYT 265
Query: 293 FGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
FG G LG G E P+AI+ + + I + + G+ H + G +YT+G G
Sbjct: 266 FGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFI--ACGENHTALITDMGLMYTFGDGR 323
Query: 352 CGALGHG 358
G LG G
Sbjct: 324 HGKLGLG 330
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRK 386
+S GDEH + + +Y +G G LG G + + P + +LK + C R
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNH- 98
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
T V + G VY G G LG D S R + Q+S G + +T
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRK--IKQLSAGSNTSAALT 156
Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
+ G LF +GDN Q+G + + P ++ +
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTV 188
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 14/143 (9%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---HVVQVSAS 171
I+ G YH+ ++ +++ G CG LG Q + R+ P VVQV+
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGL---PNQLLVNHRMPQPVPGIPGKVVQVACG 251
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFT 228
H VL V+T G G +F P+ +E +K + G N T
Sbjct: 252 GGHTV-VLTEKAVYTFGLGQ---FGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHT 307
Query: 229 GFLTIRGHVHTCGSNTHGQLGHG 251
+T G ++T G HG+LG G
Sbjct: 308 ALITDMGLMYTFGDGRHGKLGLG 330
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 12/283 (4%)
Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90
Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
+ L +++ S+ +GP +LA T +G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147
Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 377
V+ V+ G H + L S G V+ WG G +G G ++ +P ++ L++ +
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207
Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
+ + + + +VDTG VY +G+ G G LG G R L +R V +++
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264
Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
G HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 5/275 (1%)
Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
N +F G++ G LG G + + R++ + + +S S H G+VFT
Sbjct: 64 NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFT 122
Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
G N+ G+ TN + + L +V G + LT G V G N G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
Q+G G T ++P P+ + + V+ IA G +AV G VY +G N LG G
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ QP + +GI V RV+ G H + L G +Y WG G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300
Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
P+ K + + C + G VY +G
Sbjct: 301 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 3/237 (1%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
N + + ++F G N S C G D I PR +++L G ++ G L
Sbjct: 56 NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 114
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
++G ++ +G G ++ PR + + + V+ ++ G +A+ +G VY WG
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G LG G ++ P +++L+ +V T VL D G +Y +G +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 290
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 11/300 (3%)
Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
V +S + H+A V + +++ G N+ G + I +P V+ALK K G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLG-LGSKSAISKPTCVKALKPEKVKLAACGR 96
Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
N T T G+V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
+G ++ +G S +G + P+ + G V +S G H + + G +Y
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELY 212
Query: 346 TWGKGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
+G+ G LG +++ + P+ +S + + +QV T VL + +VY FG
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV-IQVACGGEHTVVLTEN-AVYTFGLGQ 270
Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
FG LG + P++++++R +S IS G HT ++TD G ++ FGD +LG
Sbjct: 271 FGQLGLGTFLF--ETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLG 328
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 128/245 (52%), Gaps = 14/245 (5%)
Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
GR HTL+ + +V++ G + G LG G +T + +F I+F ++ H + Q+SA N +A
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLG-DTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + G++F GDNS G ++ + + P+ V G P ++ G + F+T G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSN-VCVPQQVTI--GKPVSWISCGYYHSAFVTTDGE 210
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
++ G +G+LG + L + TP+ ++ + E V+Q+A G + + +T N VY+FG
Sbjct: 211 LYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE--KVIQVACGGEHTVVLTEN-AVYTFG 267
Query: 295 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G LG G + +P+ I+ R + I + S G+ H + G +YT+G G G
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYI--SCGENHTALITDIGLMYTFGDGRHG 325
Query: 354 ALGHG 358
LG G
Sbjct: 326 KLGLG 330
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARK 384
V +S GDEH + + +Y +G G LG G + + P + +LK + + C R
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97
Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
T V + G+VY G G LG D + S H + Q+S G +
Sbjct: 98 H-TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS--EHKIKQLSAGSNTSAA 154
Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
+T+ GRLF +GDN Q+G + P ++ I
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI 188
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 168/397 (42%), Gaps = 57/397 (14%)
Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRIN---FPSAAHVVQVSASENHAAFVLQSGQVFT 186
+V+ GS LG G E V R+N VV ++ H+A + G+V+T
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Query: 187 CGDNSSFCCG-----HRDTNRPIFRPRLVE--------ALKGVPCKQVTAGLNFTGFLTI 233
G N + G +D N L+E AL + +V N T +T
Sbjct: 132 WGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITD 191
Query: 234 RGHVHTCGS--NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
G T G+ + G LG+ D+ R + L E + Q+A G +++A+T G VY
Sbjct: 192 NGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPE---ICQLATGTDHIIALTTTGKVY 248
Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--------HVVRVSAGDEHVVALDSSGY 343
++G+G F LG R ++ R +G+ +++ V AG H A+D+ G
Sbjct: 249 TWGNGQQFQLGR---------RMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGR 299
Query: 344 VYTWGKGY---CGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
VY WG CG +E + +P + +L+ + + + T L++ G V
Sbjct: 300 VYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLA 359
Query: 399 FGWMGFGSLGFPDRGVSDKVLR-----------PRILDSLRAHHVSQISTGLYHTVVVTD 447
+G LG PD + + V++ P I+ L +V Q+ G +H + VT
Sbjct: 360 WGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGL--TNVIQVVCGTHHNLAVTS 417
Query: 448 RGRLFGFGDNERAQLGH-DTLRGCLEPTEIFIQEMEE 483
G+++ +G E ++G D PT + + ++E
Sbjct: 418 DGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKE 454
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 25/184 (13%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCK 219
+++ V A H+ + G+V+ G N + CG + I +P LV+AL+G K
Sbjct: 280 NIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVK 339
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE------------ 267
+T G + T L G V G + QLG D P+++ E+
Sbjct: 340 SITGGEHHTLALLEDGRVLAWGRDDRHQLG---IPDNALPETVVKDEKGNNYYLSTPTII 396
Query: 268 --VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIH 324
+ +V+Q+ G + LAVT +G VYS+GS N+ +G G+ +++ A+ T R K I
Sbjct: 397 PGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDV---AVPTLVRSKAIK 453
Query: 325 VVRV 328
V +
Sbjct: 454 EVAI 457
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 102/262 (38%), Gaps = 41/262 (15%)
Query: 125 LISNSSVFSCGSSLC--GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
+ N F+ G+ C GVLG+ + T++ P + Q++ +H + +G
Sbjct: 189 ITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLP---EICQLATGTDHIIALTTTG 245
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNFTGFLTIRGHV 237
+V+T G+ F G R + R ++ L P V AG + + +G V
Sbjct: 246 KVYTWGNGQQFQLGRR-----MLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRV 300
Query: 238 HTCGSNTHGQLG-------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
+ G N Q G G + +PT + E +V I G + LA+ +G V
Sbjct: 301 YAWGLNITRQCGIEVEDEEEGAVITKPT---LVDALEGYNVKSITGGEHHTLALLEDGRV 357
Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG-------------IHVVRVSAGDEHVVA 337
++G LG D P + + +V++V G H +A
Sbjct: 358 LAWGRDDRHQLGI---PDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLA 414
Query: 338 LDSSGYVYTWGKGYCGALGHGD 359
+ S G VY+WG +G GD
Sbjct: 415 VTSDGKVYSWGSAENYEVGQGD 436
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 9/297 (3%)
Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
+S + H A V + +++ G N+ G + I +P ++ALK K G N
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLG-LGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
T T G V+ G N GQLG GDT DR T I ++ Q++AG + A+T +
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTED 158
Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
G ++ +G S +G ++ + P + G + +S G H + G +YT+
Sbjct: 159 GKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYHSAFVTMDGELYTF 214
Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
G+ G LG +E+ P L +QV T VL + VY FG FG
Sbjct: 215 GEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEK-VVYAFGLGQFGQ 273
Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
LG + P+I++ ++ + IS G HT ++T+ G L+ FGD +LG
Sbjct: 274 LGL--GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLG 328
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 14/247 (5%)
Query: 119 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
GR HTL+ +++ V++ G + G LG G +T +F +I F + A + Q+SA N +A
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGLG-DTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
+ + G++F GDNS G D + + P E G P ++ G + F+T+ G
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSN-VCIPH--EVTVGKPISWISCGYYHSAFVTMDGE 210
Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
++T G +G+LG + L + +P+ + + E V+Q+A G + + +T VVY+FG
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE--RVIQVACGGGHTVVLT-EKVVYAFG 267
Query: 295 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
G LG G + +P+ I+ R K + +S G+ H + G +YT+G G G
Sbjct: 268 LGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTELGLLYTFGDGRHG 325
Query: 354 ALGHGDE 360
LG G E
Sbjct: 326 KLGLGME 332
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRK 386
+S GDEH + + +Y +G G LG G + P + +LK + + C R
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH- 98
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
T V DTG VY G G LG D D+ +I+ A + Q+S G + +T
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 156
Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
+ G+LF +GDN Q+G + P E+ +
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV 188
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
L HG L PL+ +V P + + +Y++G NF LGHG Q
Sbjct: 107 LKHGSNLYIQDKDGYTPLD----LVMKDRPPHIVFKTSDPTELYTWGDNVNFTLGHGTQQ 162
Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
+ P ++ F R G+++ ++ H V L G VYT G G G LGHGDE+ +P
Sbjct: 163 SKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPR 222
Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
+ L+ H QV K T VL + G VY FG F LG + V R ++
Sbjct: 223 LVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQAKTM 282
Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
+ V ++ G +HTV+ T + ++ G N QLG+
Sbjct: 283 KGKTVLGVAAGRFHTVLWT-KDAVYTVGLN-GGQLGY 317
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 20/240 (8%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTC 187
+ +++ G ++ LGHG + ++ FP S ++ Q+ + H+ F+ Q GQV+TC
Sbjct: 143 TELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTC 202
Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
G GH D PRLVE L+G PC QV + T LT G+V+T G NT Q
Sbjct: 203 GHGQGGRLGHGD-ELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQ 261
Query: 248 LGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFC 300
LG + P P S P + + +V+ +AAG + + T + VY+ G +G
Sbjct: 262 LG----IQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNGGQ-- 314
Query: 301 LGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
LG+ + + + PR + K I++ VSA D V + G +Y + C L
Sbjct: 315 LGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIYLLSEYQCKKLA 374
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 23/267 (8%)
Query: 98 QSVEHSSDIVETSAGN----MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV 152
Q +H ++VE + Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 161 QQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELT-CL 219
Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
+ QV+ +++H + + G V+T G N+ G + PR ++A
Sbjct: 220 VPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQA 279
Query: 213 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-------PKSIA 263
+KG V AG F L + V+T G N GQLG+ L P P+ ++
Sbjct: 280 KTMKGKTVLGVAAG-RFHTVLWTKDAVYTVGLNG-GQLGY---LQDPNGEKFVSCPRQVS 334
Query: 264 PLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE--LQPRAIQTFRR 320
L ++ ++A + V+ G +Y L + + + L I +
Sbjct: 335 ALHHKDINITLVSASDGATVCVSERGDIYLLSEYQCKKLASKQLNLKKVLVSGGILEHKA 394
Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTW 347
H+ V ALD +G V+ W
Sbjct: 395 APEHLKENGGQPASVFALDQAGRVFCW 421
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 156/373 (41%), Gaps = 38/373 (10%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
+F+ G++ G LG G + + +F A + V+ H+A V G +F CG N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 249
G T + R + + L+G P +QV G +FT LT +G V +CGSN GQLG
Sbjct: 77 KDGQLGLGHTEE-VLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 250 -HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCLGH 303
HG P++I L E VV +AAG + LA T G V+ +G SG C G
Sbjct: 136 PHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPG- 191
Query: 304 GEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
Q+ L A + R G+ V AG +H +L +G +Y WG+ G L
Sbjct: 192 --QNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLAS-RA 248
Query: 361 IDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
+ LP+ + + + V + +TG V+ +G +G LG R +
Sbjct: 249 VFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG--RRLEPPEA 306
Query: 419 LRPRILDSLRAHH---------------VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+P DS A ++IS G H + V R + +G NE G
Sbjct: 307 QKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVI-RDKCCSWGWNEHGMCG 365
Query: 464 HDTLRGCLEPTEI 476
T PT +
Sbjct: 366 DGTESNVWTPTPV 378
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 114/285 (40%), Gaps = 35/285 (12%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ V SCGS+ G LG HGP +CV I VV V+A
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIEC-LREKVVCVAAG 161
Query: 172 ENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQVT 222
HA +G VF G C G N P+F P V L+
Sbjct: 162 LRHALATTATGSVFQWGTGLASSGRRLCPGQ---NLPLFLTAKEPSRVTGLENSTAVCAV 218
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
AG + + LT G ++ G N HGQL P P+ I A + V + +G +++
Sbjct: 219 AGSDHSASLTDTGELYVWGRNKHGQLASRAVF-LPLPQRIEAHYFQDEKVTAVWSGWTHL 277
Query: 282 LAVTGNGVVYSFGSGSNFCLGHG----------EQHDELQPRAIQTFRRKGIHVV----R 327
+A T G V+++G LG EQ L + Q +H +
Sbjct: 278 VAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATE 337
Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
+S G EH +A+ +WG G G G E + P P+ +L
Sbjct: 338 ISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQAL 381
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-VCAR 383
+ R S E V A + ++ WG G LG G + D LP+ LS ++ V
Sbjct: 1 MARESCASETVSA---AAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGG 57
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
+ V+ D G ++ G G LG G +++VLR I LR + Q++ G T+
Sbjct: 58 GGHSAVVTDGGDLFVCGLNKDGQLGL---GHTEEVLRFTICKPLRGCPIRQVACGWDFTI 114
Query: 444 VVTDRGRLFGFGDNERAQLG-HDTLRGCLEPTEI 476
++T++G++ G N QLG R C+ P I
Sbjct: 115 MLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAI 148
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
VY++G +NF LGHG Q+ + P + F R GI++ +V H V L G VYT G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
G G LGHGDE +P + L H QV A K T VL + G VY FG F LG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI 263
Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
S V R L+ + ++ G +HTV+ T R ++ G N
Sbjct: 264 IPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWT-REAVYTMGLN 310
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 24/242 (9%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
+ V++ G + LGHG + ++ F+R S ++ QV + H+ F+ Q GQ
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSR----SGIYIKQVVLCKFHSVFLSQKGQ 197
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
V+TCG GH D + PRLVE L G C QV A + T LT G V+T G N
Sbjct: 198 VYTCGHGPGGRLGHGD-EQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 244 THGQLGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG--SG 296
QLG + P+ P+ I G +++ +AAG + + T VY+ G G
Sbjct: 257 IFHQLG---IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 297 SNFCL--GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
CL +GE+ PR + K I + V+A D V + + G +Y C
Sbjct: 313 QLGCLLDPNGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 355 LG 356
+
Sbjct: 372 MA 373
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 21/247 (8%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ ++H++ +S V++CG G LGHG E T C+ + + + QV+A+++
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CLVPRLVEGLNGHNCSQVAAAKD 239
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 231
H + + G V+T G N G PR ++A LKG V AG F L
Sbjct: 240 HTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAG-RFHTVL 298
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-------IAAGPSYMLAV 284
R V+T G N GQLG LD K + +V ++ +AA + V
Sbjct: 299 WTREAVYTMGLNG-GQLGC--LLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAI----QTFRRKGIHVVRVSAGDEHVVALDS 340
T G +Y C + L+ + ++ H+ ++A+D
Sbjct: 356 TTRGDIYLLADYQ--CKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDG 413
Query: 341 SGYVYTW 347
+G V+ W
Sbjct: 414 AGRVFCW 420
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 4/239 (1%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
++Q++ + H+ + + G++F G N G P++VE L GVP Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
+ L++ G++++ G N GQLG G T + P I L+ V +A G S+ +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
T +G++++FG+G + LGH +EL+P + G V +++ G H +A S G
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLAYVSDLGK 316
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
V+++G G G LG+G D+ +P P+ S K +++ G+ W+
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRV 328
++QI G + LA++ G ++++G + LG G + P+ ++ G+ + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL--AGVPLAQI 196
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
SAG+ H +AL SG +Y+WGK CG LG G K P + L + V +
Sbjct: 197 SAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSA 256
Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTD 447
+L G ++ FG G LG + LRP ++ L + V+QI+ G +HT+ V+D
Sbjct: 257 LLTQDGLLFTFGAGKHGQLG---HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD 313
Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
G++F FG + QLG+ R L P + + EE
Sbjct: 314 LGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEE 349
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 10/241 (4%)
Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
+QIT G YH+L +S +F+ G +L G LG G + + + + + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
H+ + SG +++ G N GH ++ P L+E L + V G + +
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKD---DPSLIEGLDNQKVEFVACGGSHSAL 257
Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 288
LT G + T G+ HGQLGH T + P +A L VG V QIA G + LA V+ G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315
Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
V+SFGSG + LG+G D+L P ++ + + + ++ E ++ + + W
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375
Query: 349 K 349
K
Sbjct: 376 K 376
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV--VQIA 275
Q+T G + L+ G + G N HGQLG G R P + P +E + V QI+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 276 AGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
AG ++ +A++ +G +YS+G LGH E D+ P I+ + + V+ G
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEF--VACGGS 253
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVD 392
H L G ++T+G G G LGH ++ P ++ L + Q+ C R + D
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD 313
Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVL 419
G V+ FG G LG + G D+++
Sbjct: 314 LGKVFSFGSGKDGQLG--NGGTRDQLM 338
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
++ ++ G + +T G++ +FGSGSN CLGHG +D QP+ ++ G +V+VS
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALL--GYELVQVS 456
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
G HV+A+ + V++WG+G G LG + P+ +S A +V + +
Sbjct: 457 CGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMI 516
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDK---------VLRPRILDS--LRAHHVSQISTG 438
+ + G F LG +++ V +++ S L + I G
Sbjct: 517 MSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIG 576
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
H+V VT++G+ F FG N+ QLG R P ++
Sbjct: 577 TAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQV 614
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 130/305 (42%), Gaps = 45/305 (14%)
Query: 93 VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
+ RFL+ + I S G++ + T L + + GS G LGHG
Sbjct: 388 ISRFLEG-QSGVTIKSVSCGDL------FTTCLTDRGIIMTFGSGSNGCLGHG------- 433
Query: 153 SFTRINFPSAAH------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPI 204
+F + P +VQVS +H V +VF+ G DN +D++
Sbjct: 434 NFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNC- 492
Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
P+ V ++V G++ + ++ + + CG+N +LG P S
Sbjct: 493 --PQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQ 550
Query: 265 LEEV-------------GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
+EEV +V I G ++ +AVT G ++FGS + LG +
Sbjct: 551 VEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRV 610
Query: 312 PRAIQTFRRKGIHVVRVSA-GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
P ++ G+ + ++A GD +A+ + G VYTWGKG G LG +E D +P+P+
Sbjct: 611 P-----YQVSGLQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEE-DFGIPKPVQ 664
Query: 371 SLKSH 375
+SH
Sbjct: 665 LDESH 669
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSF-----GSGSNFCLGHGEQHDELQPRAIQTFR--RKGI 323
V+Q++ G + + VT +G + ++ GSG G EQ +QP+ I F + G+
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQ---MQPQFISRFLEGQSGV 398
Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
+ VS GD L G + T+G G G LGHG+ D T P+ + +L + VQV
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCG 458
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
+ + V+ +G G LG D P+ + ++ G+ ++
Sbjct: 459 ASHVLAVTNEREVFSWGRGDNGRLGL---ATQDSHNCPQQVSLPADFEAQRVLCGVDCSM 515
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
+++ + ++ G+N +LG D + G EP+
Sbjct: 516 IMSTQHQILACGNNRFNKLGLDKVSGTEEPS 546
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 162/391 (41%), Gaps = 44/391 (11%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP---------SAAHVVQVSASENHAAFV- 178
+ V+S GS L G LGHG + T+ V I + + ++++ ++ F
Sbjct: 67 NKVYSWGSGLNGKLGHGLDETKIVVPKEIEIKEDDDNNRVFNQGKINKITSGTTYSIFSG 126
Query: 179 ---LQSGQVFT-CGDN--SSFCCGHRDT----NRPIFRPRLVEA--LKGVPCKQVTAGLN 226
++ QVF CGDN + G+ N + ++++ +KG KQ+ +G
Sbjct: 127 YDQIKDRQVFYGCGDNRDAQLIVGNGKIQSLENIELLESPMLKSDQMKGKQLKQLISGTY 186
Query: 227 FTGFLTI-------------RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVV 272
+ R + G++ GQ+G + + P + L E+G +
Sbjct: 187 HNACILNDSNSNNNNNNNKDRSLILLWGASNSGQIGSPEYNRVQYDPYNNKVLSEIG-IK 245
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
+I+ G ++ +A++ +G +YSFGS + LG+G+ +E +P+ I + ++ + G
Sbjct: 246 KISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGF 305
Query: 333 EHVVALDSSGYVYTWGKG---YCGALGHGD---EIDKTLPEPLSSLKSH-LAVQVCARKR 385
H VAL S + TWG+ C + G SSL H +Q+ A
Sbjct: 306 FHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDKIIQIGASNL 365
Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
+++L + G++Y G G G +L + V + + +V
Sbjct: 366 NSYILTENGNIYSIGSNDHGQCGIEKSNFKKGILNKIKIGDDGNIKVKKFYSRFKTVIVE 425
Query: 446 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
T GR FG+G N QL +T P E+
Sbjct: 426 TTDGRFFGWGSNFDHQLALETRCIYFTPMEL 456
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 78/189 (41%), Gaps = 18/189 (9%)
Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA------HVV 166
+ + G +HT+ L S++ + + G + PE T SFT + + + ++
Sbjct: 299 IDLECGFFHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDKII 358
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-----GVPCKQV 221
Q+ AS ++ + ++G +++ G N CG +N F+ ++ +K + K+
Sbjct: 359 QIGASNLNSYILTENGNIYSIGSNDHGQCGIEKSN---FKKGILNKIKIGDDGNIKVKKF 415
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGP 278
+ T G GSN QL TP + L + +++ I+
Sbjct: 416 YSRFKTVIVETTDGRFFGWGSNFDHQLALETRCIYFTPMELNNLNRLHKDYNIIDISISL 475
Query: 279 SYMLAVTGN 287
S+ +++ N
Sbjct: 476 SHCISLNSN 484
>sp|Q6ZPR6|IBTK_MOUSE Inhibitor of Bruton tyrosine kinase OS=Mus musculus GN=Ibtk PE=1
SV=3
Length = 1352
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 105/218 (48%), Gaps = 8/218 (3%)
Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML-AVTGNGVVYSFGSGSNFCLGHGEQ 306
L HG +L + ++PL+ + + P++++ T VY++G +NF LGHG Q
Sbjct: 106 LKHGVSLYMQDKEGLSPLD-----LLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQ 160
Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
+ + P + F R G++V +V H V L G VYT G G G LGHGDE +P
Sbjct: 161 NSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVP 220
Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
+ L H QV A K T VL D G VY FG F LG S V R
Sbjct: 221 RLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKY 280
Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
L+ + ++ G +HTV+ T R ++ G N QLGH
Sbjct: 281 LKGRTIIGVAAGRFHTVLWT-REAVYTLGLN-GGQLGH 316
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 108/244 (44%), Gaps = 28/244 (11%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
+ V++ G + LGHG + ++ F+R S +V QV + H+ F+ Q GQ
Sbjct: 142 TEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSR----SGVYVKQVVLCKFHSVFLSQKGQ 197
Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
V+TCG GH D + PRLVE L G C QV A + T LT G V+T G N
Sbjct: 198 VYTCGHGRGGRLGHGD-EQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLN 256
Query: 244 THGQLGHGDTLDRP----TPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG-SGS 297
QLG + P P+ I G +++ +AAG + + T VY+ G +G
Sbjct: 257 MFHQLG---IIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNGG 312
Query: 298 NFCLGH-----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
LGH GE+ PR + K I V V+A D V + + G +Y C
Sbjct: 313 Q--LGHLLDPNGEKC-VTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYLLADYQC 369
Query: 353 GALG 356
+
Sbjct: 370 KKMA 373
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 21/247 (8%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
Q+ ++H++ +S V++CG G LGHG E T C+ + S + QV+A+++
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQT-CLVPRLVEGLSGHNCSQVAAAKD 239
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 231
H + G V+T G N G PR ++A LKG V AG F L
Sbjct: 240 HTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAG-RFHTVL 298
Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDR------PTPKSIAPLEEVGSVVQ-IAAGPSYMLAV 284
R V+T G N GQLGH LD TP+ ++ L V +AA + V
Sbjct: 299 WTREAVYTLGLNG-GQLGH--LLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCV 355
Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAI----QTFRRKGIHVVRVSAGDEHVVALDS 340
T G +Y C + L+ + ++ H+ V+A+D
Sbjct: 356 TTRGDIYLLADYQ--CKKMATKQLNLKKVLVSGGCMEYKVDPEHLTENGGQKICVLAMDG 413
Query: 341 SGYVYTW 347
+G V+ W
Sbjct: 414 AGRVFCW 420
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 27/263 (10%)
Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T+ G V T G GQLG G D ++R P + E++ VQ AAG + + + +G +
Sbjct: 38 TVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDI---VQAAAGGMHTVCLGASGSI 94
Query: 291 YSFGSGSNFCLGH--GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
Y+FG LG E+ E+QP ++ + VV+VSAGD H AL G V+ +G
Sbjct: 95 YTFGCNDEGALGRDTSEEGSEMQPGKVELAEK----VVQVSAGDSHTAALTEDGRVFVFG 150
Query: 349 --KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
+ G +G + + K++ P+ + +++ + +L G +Y G G
Sbjct: 151 SFRDNNGVIGLLEPMKKSMV-PVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQ 209
Query: 407 LG-----FPDRGVS---DKVLRPRILDSLRAH-----HVSQISTGLYHTVVVTDRGRLFG 453
LG F +RG +++L P+ + L+A H + G Y T V+ G ++G
Sbjct: 210 LGRVPERFTNRGGRKGLERLLVPQCIH-LKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYG 268
Query: 454 FGDNERAQLGHDTLRGCLEPTEI 476
FG + QLG + C P +
Sbjct: 269 FGLSNYHQLGTKNTQACYAPQNL 291
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 154/371 (41%), Gaps = 45/371 (12%)
Query: 103 SSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
+ DIV+ +AG M HT+ + S S+++ G + G LG + +
Sbjct: 72 TEDIVQAAAGGM-------HTVCLGASGSIYTFGCNDEGALGR-DTSEEGSEMQPGKVEL 123
Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALK 214
A VVQVSA ++H A + + G+VF G SF RD N P+ + + V+
Sbjct: 124 AEKVVQVSAGDSHTAALTEDGRVFVFG---SF----RDNNGVIGLLEPMKKSMVPVQVQI 176
Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAP 264
P ++ +G + LT+ G ++T G GQLG L+R
Sbjct: 177 NTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIH 236
Query: 265 LEEVGS----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
L+ GS + G + AV+ G VY FG + LG P+ + +F+
Sbjct: 237 LKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKN 296
Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQ 379
+ S G H V +DS G Y+ G+ G LG G+ +++ P P+ L +V
Sbjct: 297 STKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPKINSVA 356
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVSQIST 437
A ++ + G V+ +G LG G + V P + L V +S+
Sbjct: 357 SGA--SVSYAVSTDGCVFAWGMGTNLQLG---TGEEEDVWSPEQMTGKHLEDREVLSVSS 411
Query: 438 GLYHTVVVTDR 448
G HTV++ +
Sbjct: 412 GGQHTVLLVRK 422
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 135/323 (41%), Gaps = 45/323 (13%)
Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
GQV T G G + +P LV + + Q AG T L G ++T G
Sbjct: 41 GQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDIV--QAAAGGMHTVCLGASGSIYTFG 98
Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS--GSNF 299
N G LG DT + + +E VVQ++AG S+ A+T +G V+ FGS +N
Sbjct: 99 CNDEGALGR-DTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNG 157
Query: 300 CLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
+G E + P +Q V+++++G++H+V L G +YT G G G LG
Sbjct: 158 VIGLLEPMKKSMVPVQVQI----NTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGR- 212
Query: 359 DEIDKTLPEPLSS------LKSHLAVQVCARKRK----------------TFVLVDTGSV 396
+PE ++ L+ L Q K K TF + G V
Sbjct: 213 ------VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHV 266
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYHTVVVTDRGRLFGF 454
YGFG + LG + + P+ L S + S I S G +HTV V G+ +
Sbjct: 267 YGFGLSNYHQLGTKN---TQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSL 323
Query: 455 GDNERAQLG-HDTLRGCLEPTEI 476
G E +LG + EPT I
Sbjct: 324 GRAEYGRLGLGENAEEQSEPTPI 346
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 126/264 (47%), Gaps = 36/264 (13%)
Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TP-KSI--APLEEVGSVVQ 273
+++T G + +T G + CG N GQLG G T D P TP KS+ P++ Q
Sbjct: 52 RRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQ------Q 105
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
+A G + + +T NG V S GS S LG HG + + P+AI+ + K VV ++AG
Sbjct: 106 VACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKEK---VVCIAAG 161
Query: 332 DEHVVALDSSGYVYTWGKGY--CG---ALGHGDEIDKTLPEP--LSSLKSHLAVQVCARK 384
H VA +SG V+ WG G CG G + T EP ++ L++ A+ V A
Sbjct: 162 LRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 221
Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----HVSQISTGL 439
+ L D G VY +G G L ++ P + + AH V+ I +G
Sbjct: 222 DHSASLTDAGEVYVWGSNKHGQL------ANEAAFLP-VPQKIEAHCFQNEKVTAIWSGW 274
Query: 440 YHTVVVTDRGRLFGFGDNERAQLG 463
H V T+ G++F +G + QLG
Sbjct: 275 THLVAQTETGKMFTWGRADYGQLG 298
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 124/270 (45%), Gaps = 34/270 (12%)
Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKG 215
+F V +++ H+A V G +F CG N GH + + P F P ++L G
Sbjct: 44 DFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTE-DIPYFTP--CKSLFG 100
Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 274
P +QV G +FT LT G V +CGSN+ GQLG R P++I +E VV I
Sbjct: 101 CPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKE--KVVCI 158
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFC---LGHGEQHDELQPRAIQTFRRKGIHVVR---V 328
AAG + +A T +G+V+ +G+G C L G Q L A + R G+ + V
Sbjct: 159 AAGLRHAVAATASGIVFQWGTGLASCGRRLCPG-QTLPLFFTAKEPSRVTGLENSKAMCV 217
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
AG +H +L +G VY WG G L + LP P +++H C + K
Sbjct: 218 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF---LPVP-QKIEAH-----CFQNEKVT 268
Query: 389 VL----------VDTGSVYGFGWMGFGSLG 408
+ +TG ++ +G +G LG
Sbjct: 269 AIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 123/285 (43%), Gaps = 31/285 (10%)
Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 171
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 105 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIEL-HKEKVVCIAAG 161
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 224
HA SG VF G + C G R P+F P V L+ V AG
Sbjct: 162 LRHAVAATASGIVFQWGTGLASC-GRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 283
+ + LT G V+ GSN HGQL + + P P+ I A + V I +G ++++A
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 279
Query: 284 VTGNGVVYSFGSGSNFCLGHG---------EQHDEL-----QPRAIQTFRRKGIHVVRVS 329
T G ++++G LG E+ D P ++ + VS
Sbjct: 280 QTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVS 339
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
G EH +A+ G Y+WG G G G E + P+P+ +L S
Sbjct: 340 CGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLS 383
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 4/155 (2%)
Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
LG G + D L P+ + F K V R++ G H + G ++ G G LG G
Sbjct: 28 LGLGHKEDVLLPQQLNDFC-KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHT 86
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
D P SL QV T +L + G V G FG LG P + +
Sbjct: 87 EDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHG--PRRCVV 144
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
P+ ++ L V I+ GL H V T G +F +G
Sbjct: 145 PQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWG 178
Score = 38.9 bits (89), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 102/265 (38%), Gaps = 35/265 (13%)
Query: 98 QSVE-HSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFT 155
Q++E H +V +AG ++ + + SCG LC P T + FT
Sbjct: 146 QAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLC------PGQTLPLFFT 199
Query: 156 -----RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
R+ + + V A +H+A + +G+V+ G N + P+ P+ +
Sbjct: 200 AKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV--PQKI 257
Query: 211 EA--LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG---------DTLDRPTP 259
EA + + +G T G + T G +GQLG + D P
Sbjct: 258 EAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLP 317
Query: 260 KSIAPLEEVGS------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
S P S +++ G + LA+ G GV YS+G + G G + + P+
Sbjct: 318 CSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPK 376
Query: 314 AIQTFRRKGIHVVRVSAGDEHVVAL 338
+Q +V AG H +AL
Sbjct: 377 PVQALLSSSGLLVGCGAG--HSLAL 399
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 143/348 (41%), Gaps = 33/348 (9%)
Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
H+L+I+ ++S G + G LGHG +T + + I +V + NH + +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHG-DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE 192
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
+G V+T G+N G + + P ++ G P +V G F+ + +G++++
Sbjct: 193 NGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSF 251
Query: 241 GSNTHGQLGH---GDTLDRPT---------PKSIAPLEE---------VGSVV--QIAAG 277
G +GQLGH G + R P+ +A E V +VV +A G
Sbjct: 252 GCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACG 311
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ G + A
Sbjct: 312 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFA 371
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
L G ++ WG + + P+ + L + K V D ++
Sbjct: 372 LSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTIS 425
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
FG LG+ D + +L + Q+ G H++V+
Sbjct: 426 WGPSPTFGELGYGDNKPKSSTTAQEV-KTLDGVYSEQVVMGYSHSLVI 472
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
H + + + G +++WG+ G LGHGD P+ + L + V + T L +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
G+VY FG G LG ++ +D VL P + + +++ G +++V +G L+
Sbjct: 194 GTVYTFGENKLGQLGQGNQ--TDAVLSPATI-QYNGQPIVKVACGAEFSMIVDCKGNLYS 250
Query: 454 FGDNERAQLGHDT 466
FG E QLGH++
Sbjct: 251 FGCPEYGQLGHNS 263
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 274 IAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
+ +GP ++ L +T G ++S+G LGHG+ P+ I+ + I V + G
Sbjct: 126 VVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVI--VAAACG 183
Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
H +AL +G VYT+G+ G LG G++ D L V+V + ++
Sbjct: 184 RNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVD 243
Query: 392 DTGSVYGFGWMGFGSLGFPDRGV---------SDKVLRPR----ILDSLRAHHV------ 432
G++Y FG +G LG G D L PR ++ + V
Sbjct: 244 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNV 303
Query: 433 --SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
++ G HT+V+ + R+F +G +LGH + + P
Sbjct: 304 VARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 346
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 151/377 (40%), Gaps = 42/377 (11%)
Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+++F+ G++ G LG G + + +F + + +++ H+A V G +F CG
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 74
Query: 189 DNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
N G T + F P ++L G +QV G +FT LT G V +CGSN+ GQ
Sbjct: 75 LNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQ 132
Query: 248 LGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCL 301
LG R P++I L E VV IAAG + LA T +G V+ +G SG C
Sbjct: 133 LGVPHGPRRCVIPQAIELLRE--KVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCP 190
Query: 302 GHGEQHDELQPRAIQTFRRKGI---HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
G Q L A + G+ V V AG +H +L +G +Y WG G L
Sbjct: 191 G---QTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQ 247
Query: 359 DEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG-------- 408
LP+ + + ++ V + TG V+ +G +G LG
Sbjct: 248 AAF-LLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREG 306
Query: 409 ---------FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
P G P L L ++IS G H + V G +G NE
Sbjct: 307 WESEKQDPSLPGSGPQKGT--PSCLPCLTG--ATEISCGSEHNLAVIG-GVCHSWGWNEH 361
Query: 460 AQLGHDTLRGCLEPTEI 476
G T P +
Sbjct: 362 GMCGDGTEADVWAPKPV 378
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 120/293 (40%), Gaps = 33/293 (11%)
Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSA 170
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 104 QQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPR--RCVIPQAIEL-LREKVVSIAA 160
Query: 171 SENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQV 221
HA SG VF G C G P+F P V L+ V
Sbjct: 161 GLRHALAATASGTVFQWGTGLASSGRRLCPGQ---TLPLFLTAKEPSTVTGLENSQAVCV 217
Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
AG + + LT G ++ GSN HGQL + A + + + +G +++
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHL 277
Query: 282 LAVTGNGVVYSFGSGSNFCLG------HGEQHDELQPRAIQTFRRKGIH--------VVR 327
+A T G V+++G LG G + ++ P + +KG
Sbjct: 278 VAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATE 337
Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
+S G EH +A+ G ++WG G G G E D P+P+ L+ L + V
Sbjct: 338 ISCGSEHNLAV-IGGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHV 389
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 151/371 (40%), Gaps = 40/371 (10%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
+IT G H+ ++++ S+F CG + G LG G T + + FT + QV+ +
Sbjct: 53 RITGGGGHSAVVTDEGSLFVCGLNKDGQLGLG-HTEEVLYFTPCKSLLGCAIQQVACGWD 111
Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
+ ++GQV +CG NS G R P+ +E L+ + AGL T
Sbjct: 112 FTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLR-EKVVSIAAGLRHALAATA 170
Query: 234 RGHVHTCG---SNTHGQLGHGDTLD----RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
G V G +++ +L G TL P ++ LE +V + AG + ++T
Sbjct: 171 SGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVC-VLAGSDHSASLTD 229
Query: 287 NGVVYSFGSGSNFCLGHGEQHDE----LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
G +Y +GS HG+ + L P+ I+ + + V +G H+VA +G
Sbjct: 230 AGELYVWGSNK-----HGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTG 284
Query: 343 YVYTWGKGYCGALG---------HGDEIDKTLP--EPLSSLKSHL-----AVQVCARKRK 386
V+TWG+ G LG ++ D +LP P S L A ++
Sbjct: 285 KVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEH 344
Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
++ G + +GW G G G V P+ + LR + G H++ +
Sbjct: 345 NLAVIG-GVCHSWGWNEHGMCG---DGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALC 400
Query: 447 DRGRLFGFGDN 457
L G +
Sbjct: 401 QLPALPALGQH 411
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
P AV ++++G+ S LG G + D L + + F + G + R++ G H
Sbjct: 5 PHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGC-IKRITGGGGHSAV 63
Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
+ G ++ G G LG G + P SL QV T +L + G V
Sbjct: 64 VTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVL 123
Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
G FG LG P + + P+ ++ LR VS I+ GL H + T G +F +G
Sbjct: 124 SCGSNSFGQLGVPHG--PRRCVIPQAIELLREKVVS-IAAGLRHALAATASGTVFQWG 178
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 159/381 (41%), Gaps = 49/381 (12%)
Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
V + G G LG G + ++ P VVQ A H + +SGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGLNFTGFLTIRGHVHTCGS 242
G RDT+ VE + VP K QV+AG + T LT G V GS
Sbjct: 95 DEGALG-RDTS--------VEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGS 145
Query: 243 --NTHGQLGHGDTLDRPTPKSIAPLE---EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
+ +G +G L P KS+ P++ +V VV++A+G +++ +T +G +Y+ G G
Sbjct: 146 FRDNNGVIG----LLEPMKKSMVPVQVQLDV-PVVKVASGNDHLVMLTADGDLYTLGCGE 200
Query: 298 NFCLGH---------GEQHDE--LQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGY 343
LG G Q E L P+ + R VR G A+ G+
Sbjct: 201 QGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGH 260
Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGW 401
VY +G LG +P+ L+S K+ V + T + G Y G
Sbjct: 261 VYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 320
Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
+G LG + G +K + P ++ L A VS ++ G VT GR+F +G Q
Sbjct: 321 AEYGRLGLGE-GAEEKSI-PTLISRLPA--VSSVACGASVGYAVTKDGRVFAWGMGTNYQ 376
Query: 462 LGHDTLRGCLEPTEIFIQEME 482
LG P E+ +++E
Sbjct: 377 LGTGQDEDAWSPVEMMGKQLE 397
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 232 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQV 88
Query: 291 YSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
YSFG LG + E+ P ++ + VV+VSAGD H AL G V+ WG
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEK----VVQVSAGDSHTAALTDDGRVFLWG 144
Query: 349 --KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
+ G +G + + K++ P+ V+V + +L G +Y G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSMV-PVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQ 203
Query: 407 LG-----FPDRGVS---DKVLRPR--ILDSL--RAHHVSQIS-TGLYHTVVVTDRGRLFG 453
LG F +RG +++L P+ +L S R H Q + G Y T ++ G ++G
Sbjct: 204 LGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYG 263
Query: 454 FGDNERAQLGHDTLRGCLEPTEI 476
FG + QLG C P +
Sbjct: 264 FGLSNYHQLGTPGTESCFIPQNL 286
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 149/367 (40%), Gaps = 46/367 (12%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
D+V+ AG M HT+ +S S V+S G + G LG + +
Sbjct: 68 DVVQAEAGGM-------HTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQE 119
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGV 216
VVQVSA ++H A + G+VF G SF RD N P+ + + V+ V
Sbjct: 120 KVVQVSAGDSHTAALTDDGRVFLWG---SF----RDNNGVIGLLEPMKKSMVPVQVQLDV 172
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLE 266
P +V +G + LT G ++T G GQLG L+R L+
Sbjct: 173 PVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLK 232
Query: 267 EVGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
GS + G + A++ G VY FG + LG P+ + +F+
Sbjct: 233 SRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNS 292
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 380
V S G H V +DS G Y+ G+ G LG G+ +K++P +S L + +V
Sbjct: 293 TKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVAC 352
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTG 438
A + + G V+ +G LG G + P + L V +S+G
Sbjct: 353 GA--SVGYAVTKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMMGKQLENRVVLSVSSG 407
Query: 439 LYHTVVV 445
HTV++
Sbjct: 408 GQHTVLL 414
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
I K P ++ V+V R T + G V G G LG + + K +
Sbjct: 6 IAKRRSPPADAIPKSKKVKVSHRSHST----EPGLVLTLGQGDVGQLGLGENVMERK--K 59
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGC-LEPTEIFI 478
P ++ V Q G HTV ++ G+++ FG N+ LG DT + G + P ++ +
Sbjct: 60 PALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL 117
Query: 479 QE 480
QE
Sbjct: 118 QE 119
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 171
+I G++H+ I S+ S+++ G + G LGHG + Q V TR+N V Q++
Sbjct: 831 KIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVP-TRVN-GLICKVTQIACG 888
Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTG 229
H + +G+V CG S G D + +F P + L+ + + +
Sbjct: 889 RAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR---VRDIATHYYHSI 945
Query: 230 FLTIRGHVHTCGSNTH--------------GQLGHGDTLDRPTPKSIA------------ 263
+T V G N QL + + P+P +
Sbjct: 946 CITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAE 1005
Query: 264 -PLEEVG----------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
P E++G ++V +A G S+ +T G +Y++G G ++ LGHG +++ ++P
Sbjct: 1006 IPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEP 1065
Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK---GYCGAL--GHGDEIDKT 364
Q F G V VS G+ H +A G V+ WGK G CG L +G+ D T
Sbjct: 1066 H--QVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKNGNSADVT 1120
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 148/360 (41%), Gaps = 69/360 (19%)
Query: 101 EHSSDIVETSAGNMQ-ITTGRYHTLLISNSSVFSC--GSSL--CGVLGHGPETTQCVSFT 155
+H ++E G + I G H L++S+S S G+ CGV GH + + +
Sbjct: 765 QHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGV-GH---SFRIANLH 820
Query: 156 RIN--FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVE 211
+++ +P+ + +++ + H+AF+ G ++T G GH R+ + + R+
Sbjct: 821 QVDGDWPA---IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRV-- 875
Query: 212 ALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLE 266
G+ CK Q+ G T LT G V CGS ++GQ+G D + + TP + PL
Sbjct: 876 --NGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR 933
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-------------------------------- 294
V IA + + +T + V+ +G
Sbjct: 934 ----VRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSP 989
Query: 295 --SGS----NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
+GS N L ++L R ++ F I V V+ G H + S G +YTWG
Sbjct: 990 STNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNI--VSVACGLSHSALITSEGTLYTWG 1047
Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
KG LGHG++ ++ P + V V T D GSV+ +G FG G
Sbjct: 1048 KGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 31/197 (15%)
Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNF--C-LGHGEQHDELQPRAIQTFRRKGIHVV---- 326
IA G ++L ++ +G + ++G G+ F C +GH +FR +H V
Sbjct: 781 IACGAEHILVLSSSGQLSAWG-GNRFGQCGVGH-------------SFRIANLHQVDGDW 826
Query: 327 ----RVSAGDEHVVALDSSGYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQV 380
+++ G H + S G ++T+G G G LGHG + ++ +P ++ L +
Sbjct: 827 PAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIA 886
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
C R T VL DTG V G +G +G D P L LR V I+T Y
Sbjct: 887 CGRAH-TVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR---VRDIATHYY 942
Query: 441 HTVVVTDRGRLFGFGDN 457
H++ +T+ R+F +G N
Sbjct: 943 HSICITEDNRVFEWGRN 959
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 123/312 (39%), Gaps = 51/312 (16%)
Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
PR++E G P + + G L+ G + G N GQ G G + IA L
Sbjct: 768 PRVLEYPGGRP-RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF------RIANLH 820
Query: 267 EVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
+V ++ +IA G + + +G +++FG G LGHG +++ Q + R G
Sbjct: 821 QVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQ---LVPTRVNG 877
Query: 323 I--HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLK---- 373
+ V +++ G H V L +G V G G G +G D+I K P PL L+
Sbjct: 878 LICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDI 937
Query: 374 -SHLAVQVCAR---------------KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
+H +C K + FV+ S S G + +
Sbjct: 938 ATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPR 997
Query: 418 V------------LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
V L R + ++ ++ GL H+ ++T G L+ +G QLGH
Sbjct: 998 VNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHG 1057
Query: 466 TLRGCLEPTEIF 477
+EP ++F
Sbjct: 1058 NKNERMEPHQVF 1069
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 97 LQSVEHSSDIVETSAGNM-QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSF 154
L+ V+H D GN+ + G H+ LI S ++++ G L LGHG + + +
Sbjct: 1013 LREVKHFLD------GNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNER-MEP 1065
Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
++ P+ A V VS NH G VF G N CG
Sbjct: 1066 HQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 78.2 bits (191), Expect = 1e-13, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 45/237 (18%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-GIHVVRVS 329
+V I+ G + +T G +Y+FG G LGHG P+ ++ F+ K + VV ++
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIA 249
Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLA--------- 377
G +H +AL G VY+WG LG G+ +LP+ ++ S+
Sbjct: 250 NGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNS 309
Query: 378 -------------------------------VQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
V++ ++ V+ D G ++ FG G
Sbjct: 310 TNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGR 369
Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
LG ++ + + P+++ SL+ H + +S+G H++V+T++G +F FG N++ QLG
Sbjct: 370 LGLGEQSLLMQS-TPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG 425
Score = 73.6 bits (179), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/295 (23%), Positives = 127/295 (43%), Gaps = 53/295 (17%)
Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGP 278
++ G + F+T +G+++T G G+LGHG+ +PK + + S VV IA G
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 279 SYMLAVTGNGVVYSFGSGSNFC---LGHGEQHDELQPRAIQTFR---------------- 319
+ LA+T G VYS+G G++ C LG+G + F
Sbjct: 253 KHSLALTICGKVYSWG-GNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNSTN 311
Query: 320 -----------------------RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
I +V++S G + G ++T+G+G G LG
Sbjct: 312 NNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLG 371
Query: 357 HGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPD 411
G++ + ++ P+ + SL+ H + + + + VL + G V+ FG G LG F +
Sbjct: 372 LGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSN 431
Query: 412 RGVSDKVLRPRILDSLRAH---HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
+ K ++ + ++ ++S G YH++ ++D + +G ++ LG
Sbjct: 432 QQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG 486
Score = 67.8 bits (164), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRV 328
+V+++ G + +T G++++FG G + LG GEQ +Q P+ +Q+ +G ++ +
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSL--QGHFIIDM 397
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLA--------VQ 379
S+G H + L + G V+++G+ G LG G +T+P+ + ++ ++
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVS--QI 435
V A + + D Y +G +G LG D+ L P ++ +S+ +V +
Sbjct: 458 VSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNL-PVLINSNSVVVDNVKFIDV 516
Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
S+G H V ++ G L+ +G N +LG + L P + FI +
Sbjct: 517 SSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINSKD 563
Score = 60.1 bits (144), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+V++S N +A + G +FT G D+ G + P+LV++L+G ++
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQS-TPKLVQSLQGHFIIDMS 398
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVG-------SVVQI 274
+G + LT +G V + G N GQLG G ++ T PK I + +++++
Sbjct: 399 SGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAI--QTFRRKGIHVVRVSA 330
+AG + +A++ N Y++G LG Q D P I + + + VS+
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSS 518
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
G +H VA+ G +Y+WG LG + ++ P+
Sbjct: 519 GFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPK 555
Score = 39.7 bits (91), Expect = 0.058, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 141 VLGHGPETTQCVSFTRINFP---SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
+ G+G + + + I F + +V +S H++F+ G ++T GD GH
Sbjct: 163 IWGNGIRNYKNCNMSSIGFSEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGH 222
Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
+ P+LVE + P +V + G + LTI G V++ G N QLG G+
Sbjct: 223 GNL-ESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGN 279
Score = 38.5 bits (88), Expect = 0.12, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
ISTG H+ +TD+G L+ FGD +LGH L P
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSP 231
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 136/357 (38%), Gaps = 49/357 (13%)
Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQVSASENH 174
H+LLI+ ++S G + G LGHG RI+ P V + NH
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHG-------DIKRIDVPKLIESLKGEVFVHAACGRNH 204
Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
+ ++G V+ G+N G + + P + G P +V G F+ + +
Sbjct: 205 TLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI-LYNGQPITKVACGAEFSMIMDCK 263
Query: 235 GHVHTCGSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGS 270
G++++ G +GQLGH +++ I P+ V
Sbjct: 264 GNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNV-V 322
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
V IA G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ A
Sbjct: 323 VRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYA 382
Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFV 389
G A+ G ++ WG D T+ P+ + L + K V
Sbjct: 383 GATCSFAVSEMGGLFFWG-------ATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIV 435
Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
D ++ FG LG+ D + +L + Q+ G HT+VV
Sbjct: 436 AADESTISWGPSPTFGELGYGDNKAKSSTTAQEV-KTLDGIYSDQVIMGNSHTLVVA 491
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 322 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
G+ V V++G H + + G +++WG+ G LGHGD +P+ + SLK + V
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVH 197
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTG 438
+ T L + GSVY FG G LG ++ +D V P +IL +++++ G
Sbjct: 198 AACGRNHTLALTENGSVYAFGENKMGQLGLGNK--TDAVPSPAQIL--YNGQPITKVACG 253
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDT 466
++++ +G L+ FG E QLGH++
Sbjct: 254 AEFSMIMDCKGNLYSFGCPEYGQLGHNS 281
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 271 VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
V +A+G ++ L +T G ++S+G LGHG+ P+ I++ KG V
Sbjct: 141 VRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESL--KGEVFVHA 198
Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
+ G H +AL +G VY +G+ G LG G++ D +P P L + + A +
Sbjct: 199 ACGRNHTLALTENGSVYAFGENKMGQLGLGNKTD-AVPSPAQILYNGQPITKVACGAEFS 257
Query: 389 VLVD-TGSVYGFGWMGFGSLGFPDRG----------VSDKVLRPRILDSLRAHH------ 431
+++D G++Y FG +G LG G +++ RI +
Sbjct: 258 MIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILP 317
Query: 432 -----VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
V I+ G+ H++++ + R+F +G +LGH R + P
Sbjct: 318 VPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 141/352 (40%), Gaps = 39/352 (11%)
Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--ENHAAFV 178
H+LLI+ ++S G + G LGHG T+ V R+ +H V VSA+ NH +
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHG--DTKRVEAPRL-IEGLSHEVIVSAACGRNHTLAL 217
Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
++G VF G+N G + + P + G P ++ G F+ + +G+++
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 239 TCGSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGSVVQI 274
+ G +GQLGH +++ I P+ V V +
Sbjct: 277 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV-VVRDV 335
Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
A G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ AG
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 395
Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
A+ G ++ W GA E P+ + L + K V D
Sbjct: 396 SFAVSEVGGLFFW-----GATNTSRE-STMYPKAVQDLCGWRIRSLACGKSSIIVAADES 449
Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
++ FG LG+ D + +L Q++ G H++V+
Sbjct: 450 TISWGPSPTFGELGYGDHKPKSSTAAQEV-KTLDGIFSEQVAMGYSHSLVIA 500
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 322 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
G+ V V +G H + + + G +++WG+ G LGHGD P + L + V
Sbjct: 147 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVS 206
Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
+ T L +TGSV+ FG G LG ++ +D V P + +++++ G
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLGNQ--TDAVPSPAQI-MYNGQPITKMACGA 263
Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDT 466
++++ +G L+ FG E QLGH++
Sbjct: 264 EFSMIMDCKGNLYSFGCPEYGQLGHNS 290
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
++ L +T G ++S+G LGHG+ PR I+ + I V + G H +AL
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI--VSAACGRNHTLAL 217
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD-TGSVY 397
+G V+ +G+ G LG G++ D +P P + + + A + +++D G++Y
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTD-AVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 398 GFGWMGFGSLGFPDRGV---------SDKVLRPR----ILDSLRAHH--------VSQIS 436
FG +G LG G D L PR ++ + V ++
Sbjct: 277 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 336
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
G HT+V+ + R+F +G +LGH + + P
Sbjct: 337 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 373
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 140/346 (40%), Gaps = 45/346 (13%)
Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTC 240
+V +CG+ + R T + +PR V+ + G+ Q AG + LT G V+ C
Sbjct: 153 RVLSCGEGEALGHPGRTTTK---KPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMC 209
Query: 241 GSNTHGQL------GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
G N G + G T + K +E+ G +V +AAG S+ A+T G V ++G
Sbjct: 210 GINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWG 269
Query: 295 SGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
+ N G+ + H ++Q + + +V+++AG+ H+V LD G + T+G G
Sbjct: 270 NLRN-SNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGE 328
Query: 352 CGALGHG------------DEIDKTLPEPL-----SSLKSHLAVQVCARKRKTFVLVDTG 394
G LG DE L PL +A V A T V + G
Sbjct: 329 MGQLGRSSRTKTIRSKYMCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGEDG 388
Query: 395 SVYGFGWMGFGSLGFP-------DRGVSDKVLR---PRILDSLRAHHVSQISTGLYHTVV 444
Y FG + LG G ++ LR P + A G+ H V+
Sbjct: 389 KYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVVI 448
Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF---IQEMEEDTGL 487
+ G++F G N LG G + IQE+E D+ +
Sbjct: 449 LGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKI 494
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 146/386 (37%), Gaps = 56/386 (14%)
Query: 114 MQITTGRYHT-LLISNSSVFSCGSSLCG-VLGHGPETTQCVS-FTRINFPS----AAHVV 166
+Q G H+ +L S V+ CG + G V G E F ++ F +V
Sbjct: 188 LQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIV 247
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR----PRLVEALKGVPCKQVT 222
++A + A + G V G N G+ D + + + P ++ ++
Sbjct: 248 MLAAGASFTAALTDQGSVIAWG-NLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIA 306
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---------DRPTPKSIAPL--EEVGSV 271
AG N L +G + T G GQLG D + PL + G
Sbjct: 307 AGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLLVPLRFKHKGKF 366
Query: 272 VQIAA----GPSYMLAVTG-NGVVYSFGSGSNFCLG----------HGEQHDELQ---PR 313
+ A + V G +G Y+FG + LG G+ + EL+ P
Sbjct: 367 FDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPA 426
Query: 314 AIQTF--RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-----DEIDKTLP 366
F R +++ G +HVV L S G V+ GK ALG G D+ L
Sbjct: 427 EAPAFGAERTFVNI----EGVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLY 482
Query: 367 EPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL-RPRIL 424
+ + ++ V V A+ + + G+ Y +G+ G LG + +K++ +P +
Sbjct: 483 DTIQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDEDEKMVSKPEEI 542
Query: 425 DS--LRAHHVSQISTGLYHTVVVTDR 448
S L + + S HT+++ +
Sbjct: 543 SSAHLDGYSIIGASISDQHTLIIAKK 568
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 139/350 (39%), Gaps = 35/350 (10%)
Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
H+LLI+ ++S G + G LGHG +T + + I S +V + NH +
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTD 217
Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
+G VF G+N G + + P + G P ++ G F+ + +G++++
Sbjct: 218 TGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLYSF 276
Query: 241 GSNTHGQLGH---GDTLDRP---------TPKSIA------------PLEEVGSVVQIAA 276
G +GQLGH G + R P+ +A P+ V V +A
Sbjct: 277 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV-VVRDVAC 335
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ AG
Sbjct: 336 GANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSF 395
Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
A+ G ++ WG + P+ + L + K V D ++
Sbjct: 396 AVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTI 449
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
FG LG+ D + +L Q++ G H++V+
Sbjct: 450 SWGPSPTFGELGYGDHKPKSSTAAQEV-KTLDGIFSEQVAMGYSHSLVIA 498
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 322 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
G+ V V +G H + + + G +++WG+ G LGHGD P + +L SH A+
Sbjct: 145 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEAL-SHEAIV 203
Query: 380 VCARKRK-TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
+ A R T L DTGSV+ FG G LG ++ +D V P + +++++ G
Sbjct: 204 LAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ--TDAVPSPAQI-MYNGQPITKMACG 260
Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDT 466
++++ +G L+ FG E QLGH++
Sbjct: 261 AEFSMLMDCKGNLYSFGCPEYGQLGHNS 288
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
++ L +T G ++S+G LGHG+ PR I+ + I V + G H +AL
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAI--VLAACGRNHTLAL 215
Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD-TGSVY 397
+G V+ +G+ G LG G++ D +P P + + + A + +L+D G++Y
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTD-AVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 398 GFGWMGFGSLGFPDRGV---------SDKVLRPR----ILDSLRAHH--------VSQIS 436
FG +G LG G D L PR ++ + V ++
Sbjct: 275 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 334
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
G HT+V+ + R+F +G +LGH + + P
Sbjct: 335 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 371
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 142/335 (42%), Gaps = 29/335 (8%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
VVQV+A A V +SG++ + G + +P F R +E GV
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAA 276
K V G FT LT RG + T GS ++G LGHG+ D P + L +G +VQ+A
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEAL--LGYEMVQVAC 456
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G S++LA++ +G ++++G G LG G + P+ + G RV G + +
Sbjct: 457 GASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPV--APGQEAQRVVCGIDSSM 514
Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA---VQVCARKRKTFVLVD- 392
L S G V G LG P P ++ L+ + ++ + VD
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDL 574
Query: 393 ----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
+G Y FG G LG R VS R + L+ ++ + ++ G T
Sbjct: 575 GTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIK---MVMVACGDAFT 631
Query: 443 VVVTDRGRLFGFGDNERAQLG-HDTLRGCLEPTEI 476
V V G ++ +G R +LG D G P ++
Sbjct: 632 VAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQL 666
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 14/220 (6%)
Query: 271 VVQIAAGPSYMLAVTGNGVVY-----SFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGI 323
VVQ+AAG + VT +G + G+G L + QP+ + F + G+
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELP--QPQFVSRFLEGQSGV 397
Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
+ V+ GD L G + T+G G G LGHG+ D + P + +L + VQV
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACG 457
Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
L G ++ +G G LG R + P+ + ++ G+ ++
Sbjct: 458 ASHVLALSTDGELFAWGRGDGGRLGLGTRESHNC---PQQVPVAPGQEAQRVVCGIDSSM 514
Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
++T GR+ G N +LG D L L+ + Q++EE
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLS--LDEEPVPYQQVEE 552
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 137/312 (43%), Gaps = 31/312 (9%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + + G V T G G ++ +P LV L+ V Q AG T L+
Sbjct: 26 SHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLS 83
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V++ G N G LG DT + +E VVQ++AG S+ A+T +G V+
Sbjct: 84 QSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 293 FGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
+GS +N +G E + P +Q VV+V++G++H+V L + G +YT G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQL----DAPVVKVASGNDHLVMLTNDGDLYTLGC 198
Query: 350 GYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRK--------------TFVLVDT 393
G G LG E+ ++ + L L V + +R + TF +
Sbjct: 199 GEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISRE 258
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYHTVVVTDRGRL 451
G VYGFG + LG P G P+ L S + S + S G +HTV + G+
Sbjct: 259 GHVYGFGLSNYHQLGTPGTG---SCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKA 315
Query: 452 FGFGDNERAQLG 463
+ G E +LG
Sbjct: 316 YSLGRAEYGRLG 327
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 116/263 (44%), Gaps = 26/263 (9%)
Query: 232 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T G V T G GQLG G++ L+R P + L++V VQ AG + + ++ +G V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV---VQAEAGGMHTVCLSQSGQV 88
Query: 291 YSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
YSFG LG + E+ P ++ + VV+VSAGD H AL G V+ WG
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEK----VVQVSAGDSHTAALTEDGRVFLWG 144
Query: 349 --KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
+ G +G + + K++ P+ V+V + +L + G +Y G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSM-VPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQ 203
Query: 407 LG-----FPDRGVSD---KVLRPR-ILDSLRAHH----VSQISTGLYHTVVVTDRGRLFG 453
LG F +RG ++L PR +L R G Y T ++ G ++G
Sbjct: 204 LGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYG 263
Query: 454 FGDNERAQLGHDTLRGCLEPTEI 476
FG + QLG C P +
Sbjct: 264 FGLSNYHQLGTPGTGSCFIPQNL 286
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 145/351 (41%), Gaps = 45/351 (12%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
P VVQ A H + QSGQV++ G N G RDT+ VE + VP K
Sbjct: 64 PLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALG-RDTS--------VEGSEMVPGK 114
Query: 220 --------QVTAGLNFTGFLTIRGHVHTCGS--NTHGQLGHGDTLDRPTPKSIAPLEEV- 268
QV+AG + T LT G V GS + +G +G L P KS+ P++
Sbjct: 115 VELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG----LLEPMKKSMVPVQVQL 170
Query: 269 -GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---------GEQ--HDELQPRAIQ 316
VV++A+G +++ +T +G +Y+ G G LG G Q L PR +
Sbjct: 171 DAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVL 230
Query: 317 TFRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
R VR G A+ G+VY +G LG +P+ L+S K
Sbjct: 231 LKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFK 290
Query: 374 SHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
+ V + T + G Y G +G LG + G +K + P ++ L
Sbjct: 291 NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGE-GAEEKSI-PTLISRLPV-- 346
Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
VS ++ G V+ GR+F +G QLG P E+ +++E
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLE 397
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 147/367 (40%), Gaps = 46/367 (12%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
D+V+ AG M HT+ +S S V+S G + G LG + +
Sbjct: 68 DVVQAEAGGM-------HTVCLSQSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQE 119
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGV 216
VVQVSA ++H A + + G+VF G SF RD N P+ + + V+
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWG---SF----RDNNGVIGLLEPMKKSMVPVQVQLDA 172
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLE 266
P +V +G + LT G ++T G GQLG L R L+
Sbjct: 173 PVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLK 232
Query: 267 EVGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
G+ ++ G + A++ G VY FG + LG P+ + +F+
Sbjct: 233 SRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNS 292
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 380
V S G H V +DS G Y+ G+ G LG G+ +K++P +S L + V
Sbjct: 293 TKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSV 350
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTG 438
+ + G V+ +G LG G + P + L V +S+G
Sbjct: 351 ACGASVGYAVSKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSG 407
Query: 439 LYHTVVV 445
HTV++
Sbjct: 408 GQHTVLL 414
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
I K P ++ V+V R T + G V G G LG + + K +
Sbjct: 6 IAKRRSPPEDAIPKSKKVKVSHRSHNT----EPGLVLTLGQGDVGQLGLGESVLERK--K 59
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGC-LEPTEIFI 478
P ++ L+ V Q G HTV ++ G+++ FG N+ LG DT + G + P ++ +
Sbjct: 60 PALVPLLQ--DVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL 117
Query: 479 QE 480
QE
Sbjct: 118 QE 119
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 137/312 (43%), Gaps = 31/312 (9%)
Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
+H + + G V T G G ++ +P LV L+ V Q AG T L
Sbjct: 26 SHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLN 83
Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
G V++ G N G LG DT + +E VVQ++AG S+ A+T +G V+
Sbjct: 84 QSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 293 FGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
+GS +N +G E + P +Q + VV+V++G++H+V L + G +YT G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQL----DMPVVKVASGNDHLVMLTTDGDLYTLGC 198
Query: 350 GYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRK--------------TFVLVDT 393
G G LG E+ ++ + L L V + +R + TF +
Sbjct: 199 GEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISRE 258
Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYHTVVVTDRGRL 451
G VYGFG + LG P + P+ L S + S + S G +HT+ + G+
Sbjct: 259 GHVYGFGLSNYHQLGTPG---TASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKA 315
Query: 452 FGFGDNERAQLG 463
+ G E +LG
Sbjct: 316 YSLGRAEYGRLG 327
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 146/351 (41%), Gaps = 45/351 (12%)
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
P VVQ A H + QSGQV++ G N G RDT+ VE + VP K
Sbjct: 64 PLLQDVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALG-RDTS--------VEGSEMVPGK 114
Query: 220 --------QVTAGLNFTGFLTIRGHVHTCGS--NTHGQLGHGDTLDRPTPKSIAPLEEV- 268
QV+AG + T LT G V GS + +G +G L P KS+ P++
Sbjct: 115 VELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG----LLEPMKKSMVPVQVQL 170
Query: 269 -GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---------GEQHDE--LQPRAIQ 316
VV++A+G +++ +T +G +Y+ G G LG G Q E L P+ +
Sbjct: 171 DMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVL 230
Query: 317 TFRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
R VR G A+ G+VY +G LG +P+ L+S K
Sbjct: 231 LKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFK 290
Query: 374 SHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
+ V + T + G Y G +G LG + G +K + P ++ L
Sbjct: 291 NSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGE-GAEEKSI-PTLISRLPV-- 346
Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
VS ++ G V+ GR+F +G QLG P E+ +++E
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLE 397
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 26/260 (10%)
Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
G V T G GQLG G++ L+R P + L++V VQ AG + + + +G VYSF
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV---VQAEAGGMHTVCLNQSGQVYSF 91
Query: 294 GSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG--K 349
G LG + E+ P ++ + VV+VSAGD H AL G V+ WG +
Sbjct: 92 GCNDEGALGRDTSVEGSEMVPGKVELQEK----VVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG- 408
G +G + + K++ P+ V+V + +L G +Y G G LG
Sbjct: 148 DNNGVIGLLEPMKKSM-VPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGR 206
Query: 409 ----FPDRGVS---DKVLRPR--ILDSLRAHHVSQIST---GLYHTVVVTDRGRLFGFGD 456
F +RG +++L P+ +L S + + G Y T ++ G ++GFG
Sbjct: 207 VPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGL 266
Query: 457 NERAQLGHDTLRGCLEPTEI 476
+ QLG C P +
Sbjct: 267 SNYHQLGTPGTASCFIPQNL 286
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 148/367 (40%), Gaps = 46/367 (12%)
Query: 105 DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
D+V+ AG M HT+ ++ S V+S G + G LG + +
Sbjct: 68 DVVQAEAGGM-------HTVCLNQSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQE 119
Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGV 216
VVQVSA ++H A + + G+VF G SF RD N P+ + + V+ +
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWG---SF----RDNNGVIGLLEPMKKSMVPVQVQLDM 172
Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLE 266
P +V +G + LT G ++T G GQLG L+R L+
Sbjct: 173 PVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLK 232
Query: 267 EVGSVVQIA-----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
GS ++ G A++ G VY FG + LG P+ + +F+
Sbjct: 233 SRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNS 292
Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 380
V S G H + +DS G Y+ G+ G LG G+ +K++P +S L + V
Sbjct: 293 TKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSV 350
Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTG 438
+ + G V+ +G LG G + P + L V +S+G
Sbjct: 351 ACGASVGYAVSKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSG 407
Query: 439 LYHTVVV 445
HTV++
Sbjct: 408 GQHTVLL 414
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
I K P ++ V+V R KT + G V G G LG + + K +
Sbjct: 6 IAKRRSPPEDAIPKSKKVKVSHRSHKT----EPGLVLTLGQGDVGQLGLGESVLERK--K 59
Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGC-LEPTEIFI 478
P ++ L+ V Q G HTV + G+++ FG N+ LG DT + G + P ++ +
Sbjct: 60 PALVPLLQ--DVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL 117
Query: 479 QE 480
QE
Sbjct: 118 QE 119
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 122/320 (38%), Gaps = 52/320 (16%)
Query: 164 HVVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
VVQV+A A V +SG++ S G + +P F R +E GV
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAA 276
K V G FT LT RG + T GS ++G LGHG D P + L +G +VQ+A
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL--LGYEMVQVAC 450
Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
G S++LA++ ++++G G + LG G + P+ Q G RV G + +
Sbjct: 451 GASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQ--QVPMPPGQEAQRVVCGIDSSM 508
Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
L G G LG P P ++ L +F L+ +
Sbjct: 509 ILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEAL----------SFTLLGSA-- 556
Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
L + I G H+ VT G + FG
Sbjct: 557 -----------------------------PLDQEPLLSIDLGTAHSAAVTASGDCYTFGS 587
Query: 457 NERAQLGHDTLRGCLEPTEI 476
N+ QLG +T RG P ++
Sbjct: 588 NQHGQLGTNTRRGSRAPCKV 607
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 23/229 (10%)
Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
P P PL V Q+ G ++L + G V+S+G+G + LGHG EL+PR ++
Sbjct: 149 PEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE 208
Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
+G+ + +V+AG H V L +G +Y WG G L +L +
Sbjct: 209 AL--QGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQL---------------ALPTRS 251
Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
+ A + + L + G + G P ++ + P +LD S
Sbjct: 252 GTENKAEREEATELNEDGLKEE---LAVADAGAPAHFIAIQPF-PALLDLPLGSDAVMAS 307
Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP--TEIFIQEMEE 483
G HT VVT G L+ +G + QLGH P E F++ E
Sbjct: 308 CGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLE 356
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 26/205 (12%)
Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
V Q+ H + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGH-GTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
+ L+ G ++ G N GQL T ++ + L E G ++A
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELA------ 275
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
V G+ ++F +QP G V S G H + +
Sbjct: 276 --------VADAGAPAHFIA--------IQPFPALLDLPLGSDAVMASCGSRHTAVVTRT 319
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLP 366
G +YTWG G G LGH D P
Sbjct: 320 GELYTWGWGKYGQLGHKDSTSLDRP 344
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
+L G V+ +G G LG G + L PR+L++L+ +++++ G +H+V +++
Sbjct: 174 LLLCAAGQVFSWGAGRHGQLG---HGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSE 230
Query: 448 RGRLFGFGDNERAQLGHDTLRGC------LEPTEIFIQEMEEDTGLA 488
G ++ +G NE QL T G E TE+ ++E+ +A
Sbjct: 231 TGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVA 277
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 19/247 (7%)
Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
T+ G+V CG+ GQLG G D L+R K ++P+ + V I+AG + L +T +G +
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGEDILER---KRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 291 YSFGSGSNFCLGHGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
YSFG LG D E +P I + + +SAGD H L G V+ WG
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGK----ALCISAGDSHSACLLEDGRVFAWG 151
Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
G ID P+ ++ + + + +L G V+ G G LG
Sbjct: 152 SFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLG 211
Query: 409 -FPDRGVSDK-------VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNER 459
+R +S + +LRP L RA I Y T + + + ++ G N
Sbjct: 212 RLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNF 271
Query: 460 AQLGHDT 466
QL H+T
Sbjct: 272 KQLAHET 278
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 19/237 (8%)
Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT----------QCVSFTRINFPSAAH 164
I +G H ++++ + VF+ G + G LG E + + T++ A
Sbjct: 183 IASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKP 242
Query: 165 VVQVSASENHAAFVLQSGQ--VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
+ A+ N+ F+ +S ++ G N+ H + + LK + + +
Sbjct: 243 FEAIWAT-NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDI--RHIA 299
Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYM 281
G + T LT G +G+LG GD D P + L E +V + G
Sbjct: 300 GGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE--KIVSVGCGEVCS 357
Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
AVT +G +YS+GSG N LG G+ DEL+P + + +G H++ S G +H + L
Sbjct: 358 YAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFL 414
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 144/367 (39%), Gaps = 44/367 (11%)
Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
+V CG+ G LG G + + + + P A V +SA H + +SG +++ G
Sbjct: 43 NVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDA---VDISAGGMHNLVLTKSGDIYSFG 99
Query: 189 DNSSFCCGHRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NT 244
N G RDT+ +P L++ C ++AG + + L G V GS ++
Sbjct: 100 CNDEGALG-RDTSEDGSESKPDLIDLPGKALC--ISAGDSHSACLLEDGRVFAWGSFRDS 156
Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 303
HG +G ++ TP L E IA+G +++ +T G V++ G LG
Sbjct: 157 HGNMGLTIDGNKRTP---IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 213
Query: 304 ------GE----QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
GE + D L+P + R K + + + + S W G
Sbjct: 214 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWAT---NYCTFMRESQTQVIWATGLNN 270
Query: 354 --ALGH---GDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
L H G E L+ +K+ L + + T +L G +G
Sbjct: 271 FKQLAHETKGKEF------ALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGR 324
Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
LG D V D V +P I+ L VS + G + VT G+L+ +G QLG
Sbjct: 325 LGLGD--VKDVVEKPTIVKKLTEKIVS-VGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGD 381
Query: 467 LRGCLEP 473
LEP
Sbjct: 382 GDDELEP 388
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSG 342
V GNG V G G + + L P A GI V +SAG H + L SG
Sbjct: 46 VCGNGDVGQLGLGEDIL-----ERKRLSPVA-------GIPDAVDISAGGMHNLVLTKSG 93
Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
+Y++G GALG D + +P A+ + A + L++ G V F W
Sbjct: 94 DIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRV--FAWG 151
Query: 403 GF----GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
F G++G G + +D + I++G H V++T G++F G E
Sbjct: 152 SFRDSHGNMGLTIDGN-----KRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAE 206
Query: 459 RAQLGHDTLRGC-----------LEPTEIFI 478
+ QLG + R L PT++ I
Sbjct: 207 QGQLGRLSERSISGEGRRGKRDLLRPTQLII 237
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 113/281 (40%), Gaps = 23/281 (8%)
Query: 101 EHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
E D+++ + I+ G H+ L+ + VF+ GS G+ T T I+
Sbjct: 116 ESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGS-FRDSHGNMGLTIDGNKRTPIDL 174
Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCG----------DNSSFCCGHRDTNRPIFRPRL 209
+++ +H + +G+VFT G S R R + RP
Sbjct: 175 MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQ 234
Query: 210 VEALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE- 266
+ + P + + A N+ F+ + + G N QL H +T + ++ P++
Sbjct: 235 LIITRAKPFEAIWA-TNYCTFMRESQTQVIWATGLNNFKQLAH-ETKGKEF--ALTPIKT 290
Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHV 325
E+ + IA G + + +T + G LG G+ D ++ P ++ K +
Sbjct: 291 ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEK---I 347
Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
V V G+ A+ G +Y+WG G LG GD D+ P
Sbjct: 348 VSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEP 388
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
+ ++ G EH + LD++G V++WG G G LGHG + P L +L+ + +V A
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAA 217
Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-----------------KVLR----- 420
+ + +TG +Y +GW G L P R +++ +V R
Sbjct: 218 GGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAE 277
Query: 421 -------------PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
P +LD + S G HT VVT G L+ +G + QLGH+
Sbjct: 278 DGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
Q+ G + L + G V+S+G G + LGHG EL+PR ++ +G+ + V+AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEAL--QGLVMAEVAAGG 219
Query: 333 EHVVALDSSGYVYTWGKGYCGALG----------------------HGDEIDKT------ 364
H V + +G +Y WG G L G ++ +T
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDG 279
Query: 365 LPEPLSSLKSHLA----------VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
P P +++ A V+ R T V+ TG +Y +GW +G LG D
Sbjct: 280 APAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS 339
Query: 415 SDKVLRPRILDSL--RAHHVSQISTGLYHT-VVVTDRGR 450
D RPR ++ + V ++ G ++T V ++G+
Sbjct: 340 LD---RPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGK 375
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 81/206 (39%), Gaps = 44/206 (21%)
Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
Q+ HA + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGH-GTLEAELEPRLLEALQGLVMAEVAAGGW 220
Query: 227 FTGFLTIRGHVHTCGSNTHGQLG--------HGDTLDRPTPKSIAPLEEVGSVVQIAAG- 277
+ ++ G ++ G N GQL G+T+ R + L E GS V+ G
Sbjct: 221 HSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATE----LNEDGSQVKRTGGA 276
Query: 278 ----PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
P+ +AV + GS+ V+ S G
Sbjct: 277 EDGAPAPFIAVQPFPALLDLPMGSD--------------------------AVKASCGSR 310
Query: 334 HVVALDSSGYVYTWGKGYCGALGHGD 359
H + +G +YTWG G G LGH D
Sbjct: 311 HTAVVTRTGELYTWGWGKYGQLGHED 336
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 368 PLSSLKSHLAVQVCARKRK-----TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
P + LA ++ AR+ + +L G V+ +G G LG G + L PR
Sbjct: 146 PRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPR 202
Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
+L++L+ +++++ G +H+V V++ G ++ +G NE QL T R E E +E
Sbjct: 203 LLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPT-RNLAEDGETVAREAT 261
Query: 483 E 483
E
Sbjct: 262 E 262
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 69/184 (37%), Gaps = 43/184 (23%)
Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASE 172
Q+ G H LL+ + VFS G G LGHG T + R+ V+ +V+A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHG--TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 173 NHAAFVLQSGQVFTCGDNSS--------------------------------FCCGHRDT 200
H+ V ++G ++ G N S G D
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDG 279
Query: 201 NRPIFR-----PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-- 253
F P L++ G + + G T +T G ++T G +GQLGH DT
Sbjct: 280 APAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS 339
Query: 254 LDRP 257
LDRP
Sbjct: 340 LDRP 343
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--K 214
++ P + V+ S H A V ++G+++T G GH DT + RPR VE K
Sbjct: 294 LDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS-LDRPRRVEYFVDK 352
Query: 215 GVPCKQVTAG 224
+ K VT G
Sbjct: 353 QLQVKAVTCG 362
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 126/315 (40%), Gaps = 63/315 (20%)
Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF----RPRLVEA 212
++ P V+QVS H+ + VF+ G+NS CG + I+ R ++
Sbjct: 168 LDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQD 227
Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGS 270
G QV G + + FLT +G V++CG GQ LGH + PT K L V +
Sbjct: 228 FDG-QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPT-KLGGDLAGV-N 284
Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
V+Q+A LAV+ +G + FG G++ L D Q + G+ VR +A
Sbjct: 285 VIQVATYGDCCLAVSADGGL--FGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAA 342
Query: 331 -GDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTF 388
G L+ G+V+ WG G LG G ++ +PE +
Sbjct: 343 CGGTGCAVLNGEGHVFVWGYGI---LGKGPNLVESAVPEMIPP----------------- 382
Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
+++G P I VS+I GL H +T++
Sbjct: 383 ------TLFGL-----------------TEFNPEI-------QVSRIRCGLSHFAALTNK 412
Query: 449 GRLFGFGDNERAQLG 463
G LF +G N R LG
Sbjct: 413 GELFVWGKNIRGCLG 427
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 16/265 (6%)
Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 169
+Q++ GR H+L++++ VFS G++ G G + S + R++ VVQV+
Sbjct: 177 LQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVA 236
Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
++H+ F+ G+V++CG + G N +L L GV QV +
Sbjct: 237 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCL 296
Query: 230 FLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
++ G + G++ + QL D+ P+ + VG V Q A G + + G G
Sbjct: 297 AVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLH-FSGVGKVRQAACGGTGCAVLNGEG 355
Query: 289 VVYSFGSGSNFCLGHGEQH-----DELQPRAI--QTFRRKGIHVVRVSAGDEHVVALDSS 341
V+ +G G LG G E+ P + T I V R+ G H AL +
Sbjct: 356 HVFVWGYG---ILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNK 412
Query: 342 GYVYTWGKGYCGALGHGDEIDKTLP 366
G ++ WGK G LG G D+ P
Sbjct: 413 GELFVWGKNIRGCLGIGRLEDQYFP 437
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 8/163 (4%)
Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
E P ++ R + V++VS G H + L V++ G G G ++ E
Sbjct: 160 EPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSES 219
Query: 369 -----LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
+ + VQV + + L D G VY GW G G ++ ++
Sbjct: 220 HRVHRMQDFDGQV-VQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSS--PTKL 276
Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
L +V Q++T + V+ G LFG+G++E QL T
Sbjct: 277 GGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVT 319
Score = 35.8 bits (81), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDK------VLRPRI----LDSLRAHHVSQISTGLYH 441
D V+G G LGF R DK VL P LD + V Q+S G H
Sbjct: 127 DVTKVWGMGLNKDSQLGF-HRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAH 185
Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTG 486
++V+TDR +F G+N Q G + + + M++ G
Sbjct: 186 SLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDG 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,478,541
Number of Sequences: 539616
Number of extensions: 8010154
Number of successful extensions: 19343
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 17919
Number of HSP's gapped (non-prelim): 492
length of query: 488
length of database: 191,569,459
effective HSP length: 121
effective length of query: 367
effective length of database: 126,275,923
effective search space: 46343263741
effective search space used: 46343263741
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)