Query 011339
Match_columns 488
No_of_seqs 118 out of 1219
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 06:05:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011339.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011339hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.2E-64 1.1E-68 509.8 38.9 427 8-478 12-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.9E-60 2E-64 487.7 36.5 450 1-480 1-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 9.4E-59 3.2E-63 477.3 39.3 443 1-479 1-469 (480)
4 2acv_A Triterpene UDP-glucosyl 100.0 1.3E-58 4.4E-63 474.5 38.0 440 1-478 1-462 (463)
5 2c1x_A UDP-glucose flavonoid 3 100.0 2.5E-58 8.6E-63 471.1 36.9 434 1-479 1-452 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 2E-44 6.7E-49 366.9 35.3 379 8-458 11-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 3.8E-43 1.3E-47 354.4 28.6 368 7-477 20-398 (400)
8 3rsc_A CALG2; TDP, enediyne, s 100.0 5.5E-40 1.9E-44 333.0 32.5 383 8-475 19-410 (415)
9 1iir_A Glycosyltransferase GTF 100.0 2.7E-40 9.3E-45 335.3 29.1 376 10-480 1-401 (415)
10 3ia7_A CALG4; glycosysltransfe 100.0 2.9E-39 9.8E-44 326.0 32.2 385 8-477 3-397 (402)
11 1rrv_A Glycosyltransferase GTF 100.0 3.9E-40 1.3E-44 334.3 23.2 380 10-481 1-403 (416)
12 3h4t_A Glycosyltransferase GTF 100.0 8.6E-40 2.9E-44 330.3 25.0 348 10-457 1-366 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 1.4E-38 4.8E-43 324.3 31.8 374 1-459 1-384 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 4.9E-38 1.7E-42 321.3 27.1 380 8-478 19-434 (441)
15 2p6p_A Glycosyl transferase; X 100.0 2.3E-37 7.9E-42 310.5 28.0 364 10-478 1-379 (384)
16 4fzr_A SSFS6; structural genom 100.0 1.7E-35 6E-40 298.3 25.3 349 8-457 14-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.1E-34 3.9E-39 292.3 26.9 348 8-458 19-381 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5E-34 1.7E-38 286.8 28.5 348 9-457 1-371 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 1.6E-31 5.6E-36 270.3 30.2 362 8-478 19-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2.8E-30 9.6E-35 256.7 23.8 325 10-452 3-338 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 2.7E-26 9.2E-31 202.8 12.7 162 262-457 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 6.1E-19 2.1E-23 174.8 25.2 343 10-480 7-357 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 8.1E-15 2.8E-19 138.5 18.3 118 275-408 156-275 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.5 6.7E-15 2.3E-19 133.5 8.3 120 274-405 26-184 (224)
25 3okp_A GDP-mannose-dependent a 99.5 3.8E-11 1.3E-15 119.5 30.9 353 8-481 3-380 (394)
26 3c48_A Predicted glycosyltrans 99.4 1.3E-10 4.3E-15 117.7 29.8 357 8-455 19-408 (438)
27 1v4v_A UDP-N-acetylglucosamine 99.4 1.1E-10 3.8E-15 115.7 23.6 316 8-439 4-335 (376)
28 2gek_A Phosphatidylinositol ma 99.4 2E-10 6.7E-15 114.9 25.3 324 8-451 19-362 (406)
29 1vgv_A UDP-N-acetylglucosamine 99.3 1.4E-10 4.8E-15 115.2 22.1 365 10-486 1-382 (384)
30 2r60_A Glycosyl transferase, g 99.3 1.2E-09 4.1E-14 112.6 27.7 95 337-453 334-439 (499)
31 3fro_A GLGA glycogen synthase; 99.3 1.7E-08 5.9E-13 101.6 35.6 166 278-481 252-431 (439)
32 3dzc_A UDP-N-acetylglucosamine 99.2 1.7E-09 5.9E-14 108.0 24.1 329 7-439 23-368 (396)
33 2jjm_A Glycosyl transferase, g 99.2 1.1E-08 3.8E-13 101.8 29.9 352 9-480 15-385 (394)
34 3ot5_A UDP-N-acetylglucosamine 99.2 9E-10 3.1E-14 110.2 20.5 320 8-439 26-362 (403)
35 2iw1_A Lipopolysaccharide core 99.2 1.6E-09 5.4E-14 106.9 20.7 148 278-455 197-354 (374)
36 2x6q_A Trehalose-synthase TRET 99.1 1.6E-08 5.6E-13 101.4 24.8 112 337-479 292-413 (416)
37 2iuy_A Avigt4, glycosyltransfe 99.1 2.4E-09 8.2E-14 104.5 17.7 125 279-437 164-307 (342)
38 3beo_A UDP-N-acetylglucosamine 99.1 7E-08 2.4E-12 95.2 26.9 322 8-439 7-343 (375)
39 4hwg_A UDP-N-acetylglucosamine 98.9 1.8E-08 6.2E-13 99.9 16.6 325 8-441 8-345 (385)
40 2qzs_A Glycogen synthase; glyc 98.7 1.4E-06 4.9E-11 89.0 23.7 110 338-479 347-475 (485)
41 1rzu_A Glycogen synthase 1; gl 98.7 2.1E-06 7.2E-11 87.8 24.0 80 338-439 346-444 (485)
42 2vsy_A XCC0866; transferase, g 98.7 2.8E-05 9.4E-10 81.1 32.4 95 338-451 434-535 (568)
43 3s28_A Sucrose synthase 1; gly 98.7 3.9E-06 1.3E-10 90.4 24.4 93 337-451 639-747 (816)
44 2xci_A KDO-transferase, 3-deox 98.6 1.3E-05 4.5E-10 79.1 26.0 98 339-457 261-364 (374)
45 3oy2_A Glycosyltransferase B73 98.6 5.9E-06 2E-10 82.4 21.2 87 340-450 256-367 (413)
46 2f9f_A First mannosyl transfer 98.4 4.3E-06 1.5E-10 73.1 12.6 132 279-440 25-164 (177)
47 2hy7_A Glucuronosyltransferase 98.3 7.2E-05 2.5E-09 74.6 22.5 75 337-439 264-353 (406)
48 2x0d_A WSAF; GT4 family, trans 98.1 0.00021 7.2E-09 71.3 19.1 79 338-439 295-380 (413)
49 3qhp_A Type 1 capsular polysac 97.9 0.00015 5E-09 62.2 11.9 143 277-453 2-155 (166)
50 3vue_A GBSS-I, granule-bound s 97.7 0.0096 3.3E-07 61.3 24.8 176 274-479 325-510 (536)
51 3q3e_A HMW1C-like glycosyltran 97.5 0.00095 3.3E-08 68.8 14.2 153 276-451 440-601 (631)
52 4gyw_A UDP-N-acetylglucosamine 97.5 0.0015 5.1E-08 69.9 15.2 151 274-448 520-678 (723)
53 2bfw_A GLGA glycogen synthase; 97.5 0.0019 6.4E-08 56.9 13.6 92 339-453 96-196 (200)
54 1psw_A ADP-heptose LPS heptosy 97.1 0.012 4.2E-07 56.7 16.2 103 10-146 1-106 (348)
55 3tov_A Glycosyl transferase fa 97.0 0.027 9.1E-07 54.6 16.7 105 8-146 7-115 (349)
56 3rhz_A GTF3, nucleotide sugar 96.8 0.0034 1.2E-07 60.6 9.0 111 339-477 215-337 (339)
57 2gt1_A Lipopolysaccharide hept 96.2 0.49 1.7E-05 44.9 19.9 44 10-53 1-46 (326)
58 3rfo_A Methionyl-tRNA formyltr 89.9 1.5 5.1E-05 41.4 9.7 36 6-46 1-36 (317)
59 2ywr_A Phosphoribosylglycinami 88.7 5.7 0.0002 35.0 12.2 104 9-147 1-108 (216)
60 3auf_A Glycinamide ribonucleot 88.0 6.6 0.00022 35.0 12.1 105 8-147 21-129 (229)
61 2wqk_A 5'-nucleotidase SURE; S 87.6 1.1 3.6E-05 40.8 6.7 40 9-50 1-40 (251)
62 2phj_A 5'-nucleotidase SURE; S 86.3 1.5 5.1E-05 39.7 6.8 41 9-51 1-41 (251)
63 3av3_A Phosphoribosylglycinami 84.6 10 0.00034 33.4 11.3 105 8-147 2-110 (212)
64 1ccw_A Protein (glutamate muta 83.7 3 0.0001 33.8 7.1 49 8-56 2-50 (137)
65 3zqu_A Probable aromatic acid 81.4 2.2 7.5E-05 37.5 5.6 44 8-52 3-46 (209)
66 1uqt_A Alpha, alpha-trehalose- 80.6 9.1 0.00031 38.4 10.7 109 340-480 333-454 (482)
67 2yxb_A Coenzyme B12-dependent 80.0 3.6 0.00012 34.5 6.3 49 8-56 17-65 (161)
68 1kjn_A MTH0777; hypotethical p 79.0 3.8 0.00013 33.4 5.7 43 8-50 5-49 (157)
69 3iqw_A Tail-anchored protein t 78.0 13 0.00046 35.1 10.4 42 8-49 14-56 (334)
70 3tqr_A Phosphoribosylglycinami 77.6 16 0.00053 32.2 9.9 107 6-147 2-111 (215)
71 3nb0_A Glycogen [starch] synth 77.5 3.4 0.00011 43.2 6.3 42 343-386 498-552 (725)
72 1fmt_A Methionyl-tRNA FMet for 76.9 18 0.00062 33.9 10.8 34 8-46 2-35 (314)
73 3fgn_A Dethiobiotin synthetase 74.7 41 0.0014 30.2 12.3 123 8-151 24-167 (251)
74 1y80_A Predicted cobalamin bin 74.3 8.3 0.00028 33.7 7.4 51 8-58 87-137 (210)
75 1jkx_A GART;, phosphoribosylgl 73.9 42 0.0014 29.3 11.8 104 10-147 1-107 (212)
76 3ih5_A Electron transfer flavo 73.5 6 0.0002 35.0 6.2 112 8-147 2-121 (217)
77 1mvl_A PPC decarboxylase athal 73.2 4.3 0.00015 35.6 5.1 43 8-52 18-60 (209)
78 1g5t_A COB(I)alamin adenosyltr 72.4 42 0.0014 28.9 11.2 38 8-45 27-64 (196)
79 3q0i_A Methionyl-tRNA formyltr 71.5 27 0.00092 32.7 10.5 34 8-46 6-39 (318)
80 3eag_A UDP-N-acetylmuramate:L- 71.2 3.9 0.00013 38.7 4.7 37 6-46 1-37 (326)
81 2i2x_B MTAC, methyltransferase 71.0 9.5 0.00032 34.6 7.1 50 8-57 122-171 (258)
82 3igf_A ALL4481 protein; two-do 70.7 5.2 0.00018 38.6 5.5 37 9-45 1-38 (374)
83 4dim_A Phosphoribosylglycinami 70.6 11 0.00038 36.5 8.0 34 8-46 6-39 (403)
84 2ejb_A Probable aromatic acid 70.4 7.3 0.00025 33.6 5.8 44 9-53 1-44 (189)
85 1sbz_A Probable aromatic acid 70.4 5.5 0.00019 34.5 5.1 43 10-53 1-44 (197)
86 3t5t_A Putative glycosyltransf 70.0 92 0.0032 31.1 23.3 110 339-480 353-473 (496)
87 3ty2_A 5'-nucleotidase SURE; s 68.9 4.5 0.00015 36.7 4.3 41 8-50 10-50 (261)
88 2bw0_A 10-FTHFDH, 10-formyltet 68.8 35 0.0012 32.1 10.8 105 8-150 21-130 (329)
89 3mc3_A DSRE/DSRF-like family p 67.3 10 0.00035 30.4 5.9 43 8-50 14-59 (134)
90 1p3y_1 MRSD protein; flavoprot 66.8 4 0.00014 35.3 3.4 44 8-52 7-50 (194)
91 3llv_A Exopolyphosphatase-rela 65.9 3.8 0.00013 33.0 3.0 34 8-46 5-38 (141)
92 3io3_A DEHA2D07832P; chaperone 65.6 20 0.0007 34.0 8.5 41 8-48 16-59 (348)
93 1uan_A Hypothetical protein TT 65.5 26 0.00088 31.0 8.7 36 9-44 1-36 (227)
94 4dzz_A Plasmid partitioning pr 65.4 30 0.001 29.4 9.1 39 10-48 1-41 (206)
95 2xw6_A MGS, methylglyoxal synt 64.7 21 0.0007 28.7 7.0 97 8-147 2-111 (134)
96 2ixd_A LMBE-related protein; h 64.4 30 0.001 30.9 9.0 36 9-44 3-38 (242)
97 3ezx_A MMCP 1, monomethylamine 63.3 14 0.00049 32.4 6.5 49 8-56 91-139 (215)
98 3ug7_A Arsenical pump-driving 63.0 53 0.0018 31.0 11.0 40 8-47 24-64 (349)
99 3ouz_A Biotin carboxylase; str 62.6 13 0.00045 36.6 6.9 33 10-47 7-39 (446)
100 3qjg_A Epidermin biosynthesis 62.6 7 0.00024 33.2 4.1 43 10-53 6-48 (175)
101 2bln_A Protein YFBG; transfera 62.1 43 0.0015 31.1 9.9 40 109-150 66-106 (305)
102 1meo_A Phosophoribosylglycinam 60.6 84 0.0029 27.2 11.8 104 10-147 1-107 (209)
103 3tqq_A Methionyl-tRNA formyltr 60.3 39 0.0013 31.5 9.2 33 9-46 2-34 (314)
104 3ghy_A Ketopantoate reductase 60.2 8.1 0.00028 36.6 4.6 34 8-46 2-35 (335)
105 4b4o_A Epimerase family protei 60.1 6.2 0.00021 36.4 3.7 33 10-46 1-33 (298)
106 4dll_A 2-hydroxy-3-oxopropiona 59.5 9.9 0.00034 35.7 5.0 34 8-46 30-63 (320)
107 1id1_A Putative potassium chan 59.5 7.5 0.00026 31.8 3.7 34 8-46 2-35 (153)
108 3u7q_B Nitrogenase molybdenum- 59.3 90 0.0031 31.4 12.3 35 108-147 428-469 (523)
109 3lqk_A Dipicolinate synthase s 59.2 12 0.00042 32.4 5.2 39 8-47 6-45 (201)
110 3g0o_A 3-hydroxyisobutyrate de 58.3 5.6 0.00019 37.1 3.0 38 1-45 1-38 (303)
111 1xmp_A PURE, phosphoribosylami 58.0 82 0.0028 26.3 10.2 141 276-463 11-166 (170)
112 1qgu_B Protein (nitrogenase mo 57.5 70 0.0024 32.2 11.2 35 108-147 424-465 (519)
113 3da8_A Probable 5'-phosphoribo 57.4 31 0.0011 30.2 7.5 105 8-147 11-117 (215)
114 3hwr_A 2-dehydropantoate 2-red 57.1 11 0.00037 35.4 4.8 32 8-44 18-49 (318)
115 3hn2_A 2-dehydropantoate 2-red 56.7 16 0.00055 34.0 6.0 33 10-47 3-35 (312)
116 2ark_A Flavodoxin; FMN, struct 56.5 11 0.00038 32.0 4.5 41 6-46 1-43 (188)
117 2q5c_A NTRC family transcripti 55.9 3.1 0.00011 36.2 0.7 38 110-152 134-171 (196)
118 3r6d_A NAD-dependent epimerase 55.8 9 0.00031 33.4 3.9 37 7-46 2-39 (221)
119 1f0y_A HCDH, L-3-hydroxyacyl-C 55.7 7.6 0.00026 36.1 3.5 37 5-46 11-47 (302)
120 1jx7_A Hypothetical protein YC 55.5 16 0.00054 28.1 4.8 39 9-47 1-44 (117)
121 3i83_A 2-dehydropantoate 2-red 55.4 16 0.00056 34.1 5.8 33 10-47 3-35 (320)
122 3kcq_A Phosphoribosylglycinami 55.1 60 0.0021 28.4 9.0 100 8-147 7-110 (215)
123 3pdi_A Nitrogenase MOFE cofact 54.9 83 0.0028 31.3 11.1 36 107-147 390-425 (483)
124 3pdi_B Nitrogenase MOFE cofact 54.8 35 0.0012 33.8 8.3 34 109-147 366-399 (458)
125 2r8r_A Sensor protein; KDPD, P 54.5 17 0.00057 32.3 5.2 40 8-47 5-44 (228)
126 3mcu_A Dipicolinate synthase, 53.7 14 0.00047 32.3 4.5 39 8-47 4-43 (207)
127 2g1u_A Hypothetical protein TM 53.6 12 0.00041 30.6 4.1 34 8-46 18-51 (155)
128 2qyt_A 2-dehydropantoate 2-red 52.7 6.5 0.00022 36.6 2.5 33 8-45 7-45 (317)
129 1vpd_A Tartronate semialdehyde 51.9 14 0.00046 34.1 4.6 34 7-45 2-36 (299)
130 3dm5_A SRP54, signal recogniti 51.4 69 0.0023 31.5 9.6 42 9-50 100-141 (443)
131 3vot_A L-amino acid ligase, BL 51.3 43 0.0015 32.5 8.3 35 108-144 65-101 (425)
132 2qs7_A Uncharacterized protein 51.1 18 0.00061 29.4 4.6 42 11-52 9-51 (144)
133 2vo1_A CTP synthase 1; pyrimid 51.1 18 0.0006 32.9 4.8 40 8-47 21-63 (295)
134 2iz6_A Molybdenum cofactor car 51.0 24 0.00082 29.8 5.5 44 341-385 92-140 (176)
135 1g63_A Epidermin modifying enz 51.0 13 0.00043 31.8 3.8 42 10-52 3-44 (181)
136 2ew2_A 2-dehydropantoate 2-red 50.8 10 0.00035 35.1 3.5 33 8-45 2-34 (316)
137 4ds3_A Phosphoribosylglycinami 50.7 85 0.0029 27.2 9.2 105 8-147 6-114 (209)
138 3l6d_A Putative oxidoreductase 50.5 10 0.00035 35.3 3.4 33 8-45 8-40 (306)
139 1o4v_A Phosphoribosylaminoimid 50.2 1.2E+02 0.0039 25.7 10.0 143 276-462 13-165 (183)
140 2a5l_A Trp repressor binding p 49.9 21 0.0007 30.5 5.1 39 8-46 4-43 (200)
141 2pju_A Propionate catabolism o 49.6 25 0.00087 31.0 5.7 28 355-385 64-91 (225)
142 3u7i_A FMN-dependent NADH-azor 49.6 16 0.00055 32.2 4.4 40 6-45 1-49 (223)
143 3kkl_A Probable chaperone prot 49.4 25 0.00084 31.5 5.7 39 8-46 2-51 (244)
144 4gbj_A 6-phosphogluconate dehy 49.4 14 0.00047 34.3 4.1 32 8-44 3-35 (297)
145 2h78_A Hibadh, 3-hydroxyisobut 49.1 13 0.00046 34.3 4.0 33 8-45 2-34 (302)
146 1ydg_A Trp repressor binding p 48.8 23 0.00078 30.6 5.3 39 8-46 5-44 (211)
147 1bg6_A N-(1-D-carboxylethyl)-L 48.8 12 0.0004 35.5 3.7 33 8-45 3-35 (359)
148 3p0r_A Azoreductase; structura 48.7 16 0.00055 31.8 4.3 40 6-45 1-47 (211)
149 3f6r_A Flavodoxin; FMN binding 48.4 19 0.00065 29.0 4.4 38 9-46 1-39 (148)
150 1lss_A TRK system potassium up 48.3 12 0.00039 29.7 3.0 34 8-46 3-36 (140)
151 1mio_B Nitrogenase molybdenum 47.7 1E+02 0.0034 30.4 10.4 35 108-147 375-409 (458)
152 3dfu_A Uncharacterized protein 47.7 13 0.00045 33.1 3.5 34 8-46 5-38 (232)
153 2hmt_A YUAA protein; RCK, KTN, 46.5 11 0.00037 30.0 2.6 34 8-46 5-38 (144)
154 4gi5_A Quinone reductase; prot 46.0 31 0.0011 31.6 5.9 38 8-45 21-61 (280)
155 1u11_A PURE (N5-carboxyaminoim 45.8 1.1E+02 0.0038 25.8 8.6 140 277-463 22-176 (182)
156 3bul_A Methionine synthase; tr 45.6 41 0.0014 34.3 7.2 51 8-58 97-147 (579)
157 1evy_A Glycerol-3-phosphate de 45.5 8.1 0.00028 37.0 1.9 33 9-46 15-47 (366)
158 2hy5_A Putative sulfurtransfer 45.5 31 0.0011 27.3 5.2 37 10-46 1-41 (130)
159 2q5c_A NTRC family transcripti 45.4 19 0.00065 31.0 4.1 29 357-386 52-80 (196)
160 4hb9_A Similarities with proba 45.3 13 0.00046 35.6 3.5 30 9-43 1-30 (412)
161 1gsa_A Glutathione synthetase; 45.1 19 0.00064 33.2 4.4 38 9-46 1-41 (316)
162 3c24_A Putative oxidoreductase 44.8 17 0.0006 33.2 4.1 32 9-45 11-43 (286)
163 4huj_A Uncharacterized protein 44.8 12 0.00041 32.9 2.8 34 8-46 22-55 (220)
164 3doj_A AT3G25530, dehydrogenas 44.7 16 0.00055 34.0 3.8 33 8-45 20-52 (310)
165 3rpe_A MDAB, modulator of drug 44.2 26 0.00089 30.8 4.8 40 6-45 22-68 (218)
166 2d1p_A TUSD, hypothetical UPF0 44.1 39 0.0013 27.3 5.5 38 9-46 12-53 (140)
167 3bgw_A DNAB-like replicative h 44.1 55 0.0019 32.2 7.8 43 11-53 199-241 (444)
168 1efv_A Electron transfer flavo 43.7 37 0.0013 31.7 6.1 111 9-150 1-119 (315)
169 2gk4_A Conserved hypothetical 43.6 38 0.0013 30.0 5.8 22 25-46 31-52 (232)
170 3gpi_A NAD-dependent epimerase 43.6 26 0.0009 31.7 5.1 34 8-46 2-35 (286)
171 3dhn_A NAD-dependent epimerase 43.2 22 0.00075 30.9 4.3 35 8-46 3-37 (227)
172 3mjf_A Phosphoribosylamine--gl 42.8 19 0.00065 35.4 4.2 26 8-38 2-27 (431)
173 3obb_A Probable 3-hydroxyisobu 42.8 20 0.00067 33.3 4.0 33 8-45 2-34 (300)
174 3of5_A Dethiobiotin synthetase 42.7 29 0.00098 30.7 5.0 39 6-44 1-40 (228)
175 2vpq_A Acetyl-COA carboxylase; 42.7 64 0.0022 31.5 8.1 32 10-46 2-33 (451)
176 2xj4_A MIPZ; replication, cell 42.1 28 0.00094 31.8 5.0 40 8-47 2-43 (286)
177 1qzu_A Hypothetical protein MD 41.7 21 0.0007 31.2 3.7 43 8-51 18-61 (206)
178 1e2b_A Enzyme IIB-cellobiose; 41.3 47 0.0016 25.2 5.4 39 8-46 2-40 (106)
179 3kjh_A CO dehydrogenase/acetyl 41.3 18 0.00062 31.9 3.5 38 10-47 1-38 (254)
180 1qkk_A DCTD, C4-dicarboxylate 41.1 59 0.002 25.8 6.5 48 375-438 74-121 (155)
181 2q6t_A DNAB replication FORK h 40.6 1.8E+02 0.0061 28.3 11.0 43 11-53 202-245 (444)
182 1rw7_A YDR533CP; alpha-beta sa 40.1 51 0.0017 29.3 6.3 39 8-46 2-51 (243)
183 2zki_A 199AA long hypothetical 40.0 29 0.00098 29.6 4.5 38 8-46 3-41 (199)
184 2fb6_A Conserved hypothetical 39.8 28 0.00096 27.1 3.9 39 9-47 7-49 (117)
185 3n7t_A Macrophage binding prot 39.8 52 0.0018 29.4 6.2 39 8-46 8-57 (247)
186 2yvq_A Carbamoyl-phosphate syn 39.7 36 0.0012 27.5 4.7 96 13-146 27-130 (143)
187 1u9c_A APC35852; structural ge 39.7 50 0.0017 28.7 6.1 41 6-46 1-51 (224)
188 1z7e_A Protein aRNA; rossmann 39.5 52 0.0018 34.1 7.2 39 110-150 67-106 (660)
189 3ego_A Probable 2-dehydropanto 39.4 29 0.00099 32.2 4.7 32 9-46 2-33 (307)
190 2lnd_A De novo designed protei 39.4 34 0.0012 24.3 3.8 50 375-437 50-100 (112)
191 1pzg_A LDH, lactate dehydrogen 39.0 18 0.0006 34.2 3.1 41 1-46 1-42 (331)
192 1yb4_A Tartronic semialdehyde 38.6 21 0.00072 32.7 3.6 32 8-44 2-33 (295)
193 2c5m_A CTP synthase; cytidine 38.5 23 0.00077 31.9 3.4 39 8-46 21-62 (294)
194 3pid_A UDP-glucose 6-dehydroge 38.3 20 0.00068 35.2 3.4 33 8-46 35-67 (432)
195 2raf_A Putative dinucleotide-b 38.3 23 0.00078 30.7 3.5 34 8-46 18-51 (209)
196 3zzm_A Bifunctional purine bio 38.2 1.1E+02 0.0038 30.4 8.5 110 8-137 8-118 (523)
197 3pdu_A 3-hydroxyisobutyrate de 38.2 21 0.00072 32.7 3.5 33 9-46 1-33 (287)
198 1p9o_A Phosphopantothenoylcyst 37.9 23 0.00078 33.1 3.6 36 12-47 40-89 (313)
199 1ks9_A KPA reductase;, 2-dehyd 37.9 22 0.00075 32.3 3.5 32 10-46 1-32 (291)
200 1b93_A Protein (methylglyoxal 37.8 70 0.0024 26.2 6.1 94 10-146 12-118 (152)
201 2r85_A PURP protein PF1517; AT 37.7 30 0.001 32.1 4.6 33 9-47 2-34 (334)
202 2dpo_A L-gulonate 3-dehydrogen 37.6 21 0.00072 33.5 3.4 34 8-46 5-38 (319)
203 3sbx_A Putative uncharacterize 37.2 44 0.0015 28.5 5.1 37 8-45 12-52 (189)
204 3tov_A Glycosyl transferase fa 37.2 1.1E+02 0.0039 28.6 8.6 102 10-152 186-291 (349)
205 3ew7_A LMO0794 protein; Q8Y8U8 37.2 25 0.00086 30.2 3.7 33 10-46 1-33 (221)
206 3fwz_A Inner membrane protein 37.1 18 0.00062 28.9 2.5 33 9-46 7-39 (140)
207 3l4b_C TRKA K+ channel protien 37.0 13 0.00044 32.5 1.7 32 10-46 1-32 (218)
208 3l7i_A Teichoic acid biosynthe 36.9 14 0.00049 39.0 2.3 121 343-483 604-724 (729)
209 3k96_A Glycerol-3-phosphate de 36.8 21 0.00072 34.1 3.3 34 8-46 28-61 (356)
210 1z82_A Glycerol-3-phosphate de 36.1 25 0.00085 33.0 3.7 33 9-46 14-46 (335)
211 3l4e_A Uncharacterized peptida 36.0 60 0.002 28.1 5.8 47 265-311 17-63 (206)
212 3vps_A TUNA, NAD-dependent epi 35.6 20 0.00067 33.0 2.9 35 8-46 6-40 (321)
213 3q9l_A Septum site-determining 35.6 39 0.0013 29.9 4.8 39 9-47 1-41 (260)
214 2q62_A ARSH; alpha/beta, flavo 35.5 50 0.0017 29.5 5.4 38 8-45 33-73 (247)
215 2lpm_A Two-component response 35.4 33 0.0011 26.9 3.8 34 112-147 47-85 (123)
216 1g3q_A MIND ATPase, cell divis 35.4 43 0.0015 29.2 5.0 39 9-47 1-41 (237)
217 2zts_A Putative uncharacterize 35.0 39 0.0013 29.6 4.7 45 11-55 32-77 (251)
218 2l2q_A PTS system, cellobiose- 34.8 43 0.0015 25.6 4.2 39 8-46 3-41 (109)
219 3p9x_A Phosphoribosylglycinami 34.6 2.2E+02 0.0077 24.5 12.1 104 9-147 2-109 (211)
220 3h2s_A Putative NADH-flavin re 34.4 29 0.001 29.9 3.7 33 10-46 1-33 (224)
221 3qsg_A NAD-binding phosphogluc 34.4 21 0.00072 33.2 2.8 33 8-45 23-56 (312)
222 1dhr_A Dihydropteridine reduct 34.4 39 0.0013 29.7 4.5 40 1-46 1-40 (241)
223 3to5_A CHEY homolog; alpha(5)b 34.1 49 0.0017 26.3 4.7 42 108-151 47-97 (134)
224 3ic5_A Putative saccharopine d 33.8 28 0.00094 26.3 3.0 34 8-46 4-38 (118)
225 3lk7_A UDP-N-acetylmuramoylala 33.5 1.1E+02 0.0037 30.0 8.1 33 8-45 8-40 (451)
226 4b4k_A N5-carboxyaminoimidazol 33.5 2.1E+02 0.0073 24.0 11.7 149 276-463 22-177 (181)
227 3dfz_A SIRC, precorrin-2 dehyd 33.0 1.6E+02 0.0053 25.8 8.1 152 269-459 26-186 (223)
228 3lp6_A Phosphoribosylaminoimid 32.9 2.2E+02 0.0074 23.8 9.7 144 277-460 8-157 (174)
229 4eg0_A D-alanine--D-alanine li 32.8 53 0.0018 30.3 5.4 38 9-46 13-54 (317)
230 2vrn_A Protease I, DR1199; cys 32.7 92 0.0031 26.1 6.5 38 8-46 8-45 (190)
231 3b6i_A Flavoprotein WRBA; flav 32.5 50 0.0017 27.8 4.8 38 9-46 1-40 (198)
232 1eiw_A Hypothetical protein MT 32.2 71 0.0024 24.6 5.0 65 352-437 36-109 (111)
233 3tjr_A Short chain dehydrogena 32.2 1.4E+02 0.0048 27.2 8.2 34 10-46 31-64 (301)
234 3rht_A (gatase1)-like protein; 32.2 28 0.00096 31.5 3.1 38 6-47 1-40 (259)
235 3g79_A NDP-N-acetyl-D-galactos 32.0 45 0.0015 33.2 4.9 34 8-46 17-52 (478)
236 2o3j_A UDP-glucose 6-dehydroge 32.0 42 0.0015 33.4 4.8 40 1-45 1-42 (481)
237 4g65_A TRK system potassium up 31.8 21 0.00073 35.4 2.5 40 9-55 3-42 (461)
238 3sxp_A ADP-L-glycero-D-mannohe 31.7 34 0.0011 32.3 3.8 35 8-46 9-45 (362)
239 2pju_A Propionate catabolism o 31.7 7.8 0.00027 34.4 -0.7 114 21-148 46-179 (225)
240 3ksu_A 3-oxoacyl-acyl carrier 31.6 1.1E+02 0.0036 27.3 7.1 33 10-45 11-43 (262)
241 1txg_A Glycerol-3-phosphate de 31.5 37 0.0013 31.6 4.1 31 10-45 1-31 (335)
242 1mkz_A Molybdenum cofactor bio 31.5 1.8E+02 0.0063 24.0 8.0 54 8-61 9-66 (172)
243 2c20_A UDP-glucose 4-epimerase 31.4 33 0.0011 31.7 3.7 33 9-45 1-33 (330)
244 2w36_A Endonuclease V; hypoxan 31.4 67 0.0023 28.3 5.3 40 108-147 91-137 (225)
245 3lyu_A Putative hydrogenase; t 31.2 42 0.0014 27.0 3.8 37 9-48 18-54 (142)
246 4e12_A Diketoreductase; oxidor 31.1 39 0.0013 30.8 4.0 34 8-46 3-36 (283)
247 3czc_A RMPB; alpha/beta sandwi 30.9 49 0.0017 25.3 4.0 39 8-46 17-57 (110)
248 3i4f_A 3-oxoacyl-[acyl-carrier 30.9 60 0.0021 28.8 5.3 36 8-46 5-40 (264)
249 3slg_A PBGP3 protein; structur 30.9 29 0.00099 32.8 3.2 35 8-46 23-58 (372)
250 4e21_A 6-phosphogluconate dehy 30.9 28 0.00094 33.2 3.0 34 8-46 21-54 (358)
251 2w70_A Biotin carboxylase; lig 30.8 1.2E+02 0.0041 29.5 7.8 32 10-46 3-34 (449)
252 3icc_A Putative 3-oxoacyl-(acy 30.7 2.6E+02 0.009 24.1 11.2 34 10-46 7-40 (255)
253 4dgk_A Phytoene dehydrogenase; 30.6 22 0.00077 35.3 2.5 30 9-43 1-30 (501)
254 3gi1_A LBP, laminin-binding pr 30.6 2.8E+02 0.0095 25.1 9.8 40 106-147 216-257 (286)
255 4ezb_A Uncharacterized conserv 30.2 33 0.0011 32.0 3.4 33 9-46 24-57 (317)
256 3gl9_A Response regulator; bet 30.2 68 0.0023 24.2 4.9 42 108-151 36-86 (122)
257 3cky_A 2-hydroxymethyl glutara 30.2 51 0.0017 30.1 4.7 33 8-45 3-35 (301)
258 3g17_A Similar to 2-dehydropan 30.1 16 0.00053 33.8 1.1 33 9-46 2-34 (294)
259 4da9_A Short-chain dehydrogena 30.0 2.2E+02 0.0075 25.4 9.0 33 10-45 29-61 (280)
260 1vmd_A MGS, methylglyoxal synt 29.8 84 0.0029 26.5 5.4 86 20-146 36-134 (178)
261 3qxc_A Dethiobiotin synthetase 29.8 56 0.0019 29.1 4.7 37 8-44 19-57 (242)
262 3qha_A Putative oxidoreductase 29.8 27 0.00094 32.1 2.7 32 9-45 15-46 (296)
263 3c1o_A Eugenol synthase; pheny 29.7 52 0.0018 30.2 4.7 36 8-47 3-38 (321)
264 3lrx_A Putative hydrogenase; a 29.7 41 0.0014 27.6 3.6 36 10-48 24-59 (158)
265 1xrs_B D-lysine 5,6-aminomutas 29.6 50 0.0017 29.9 4.3 49 8-56 119-176 (262)
266 4f3r_A Phosphopantetheine aden 29.5 49 0.0017 27.4 4.0 36 6-45 1-40 (162)
267 2r6j_A Eugenol synthase 1; phe 29.5 58 0.002 29.9 5.0 33 11-47 13-45 (318)
268 3goc_A Endonuclease V; alpha-b 29.4 77 0.0026 28.0 5.3 40 108-147 95-141 (237)
269 3o1l_A Formyltetrahydrofolate 29.3 3.4E+02 0.012 24.9 10.1 110 6-150 102-212 (302)
270 2a33_A Hypothetical protein; s 29.0 86 0.0029 27.3 5.7 39 8-46 12-54 (215)
271 4gwg_A 6-phosphogluconate dehy 29.0 31 0.0011 34.4 3.1 33 8-45 3-35 (484)
272 1q1v_A DEK protein; winged-hel 28.9 1.2E+02 0.0041 21.1 5.3 54 422-478 11-66 (70)
273 1kjq_A GART 2, phosphoribosylg 28.9 52 0.0018 31.4 4.7 37 5-46 7-43 (391)
274 3ius_A Uncharacterized conserv 28.8 37 0.0013 30.6 3.5 33 9-46 5-37 (286)
275 3d1l_A Putative NADP oxidoredu 28.8 24 0.00083 31.7 2.2 33 8-45 9-42 (266)
276 3dqp_A Oxidoreductase YLBE; al 28.7 32 0.0011 29.6 2.9 33 10-46 1-33 (219)
277 3pef_A 6-phosphogluconate dehy 28.7 40 0.0014 30.7 3.7 32 10-46 2-33 (287)
278 1hyq_A MIND, cell division inh 28.6 54 0.0018 29.2 4.5 39 9-47 1-41 (263)
279 1jay_A Coenzyme F420H2:NADP+ o 28.3 40 0.0014 28.9 3.5 32 10-46 1-33 (212)
280 3qjg_A Epidermin biosynthesis 28.0 2.3E+02 0.0078 23.7 7.9 141 277-431 7-174 (175)
281 2vns_A Metalloreductase steap3 27.9 38 0.0013 29.4 3.2 34 8-46 27-60 (215)
282 1xjc_A MOBB protein homolog; s 27.8 95 0.0033 25.8 5.5 39 8-46 3-41 (169)
283 3dtt_A NADP oxidoreductase; st 27.8 46 0.0016 29.5 3.8 34 8-46 18-51 (245)
284 2x5n_A SPRPN10, 26S proteasome 27.7 2E+02 0.0068 24.3 7.8 62 9-72 106-171 (192)
285 3ors_A N5-carboxyaminoimidazol 27.7 2.6E+02 0.0088 23.1 10.8 138 277-460 4-155 (163)
286 3hly_A Flavodoxin-like domain; 27.6 78 0.0027 25.9 5.0 37 10-46 1-38 (161)
287 1lld_A L-lactate dehydrogenase 27.6 34 0.0012 31.7 3.0 34 8-46 6-41 (319)
288 1psw_A ADP-heptose LPS heptosy 27.5 3.6E+02 0.012 24.6 11.6 40 10-49 181-225 (348)
289 3zq6_A Putative arsenical pump 27.5 71 0.0024 29.7 5.3 38 10-47 14-52 (324)
290 1ehi_A LMDDL2, D-alanine:D-lac 27.5 52 0.0018 31.4 4.4 38 8-45 2-44 (377)
291 2d1p_B TUSC, hypothetical UPF0 27.4 86 0.003 24.2 4.9 37 11-47 3-42 (119)
292 3n0v_A Formyltetrahydrofolate 27.4 1.7E+02 0.006 26.6 7.7 102 8-147 89-194 (286)
293 3f2v_A General stress protein 27.4 44 0.0015 28.6 3.4 36 9-44 1-37 (192)
294 1tvm_A PTS system, galactitol- 27.4 92 0.0031 23.8 5.0 38 8-45 20-58 (113)
295 1hdo_A Biliverdin IX beta redu 27.3 54 0.0018 27.5 4.1 33 10-46 4-36 (206)
296 1iow_A DD-ligase, DDLB, D-ALA\ 27.2 79 0.0027 28.7 5.5 38 9-46 2-43 (306)
297 1i36_A Conserved hypothetical 27.2 43 0.0015 29.9 3.5 30 10-44 1-30 (264)
298 2pjk_A 178AA long hypothetical 27.2 2.5E+02 0.0087 23.3 8.2 53 8-60 14-77 (178)
299 3h7a_A Short chain dehydrogena 27.0 1.6E+02 0.0056 25.8 7.5 34 10-46 7-40 (252)
300 1t1j_A Hypothetical protein; s 27.0 81 0.0028 24.9 4.6 34 8-41 6-47 (125)
301 3ro0_A Pyrrolidone-carboxylate 26.9 54 0.0019 28.8 4.0 28 9-36 2-31 (223)
302 1xp8_A RECA protein, recombina 26.7 1.8E+02 0.0062 27.6 8.0 40 11-50 76-115 (366)
303 2ahr_A Putative pyrroline carb 26.6 36 0.0012 30.4 2.9 33 8-45 2-34 (259)
304 3r6w_A FMN-dependent NADH-azor 26.5 51 0.0017 28.4 3.8 38 9-46 1-44 (212)
305 3nva_A CTP synthase; rossman f 26.5 68 0.0023 32.2 5.0 39 9-47 2-43 (535)
306 1wcv_1 SOJ, segregation protei 26.4 56 0.0019 29.0 4.2 41 8-48 4-46 (257)
307 2hy5_B Intracellular sulfur ox 26.4 54 0.0019 26.2 3.6 39 9-47 5-46 (136)
308 2hna_A Protein MIOC, flavodoxi 26.4 81 0.0028 25.1 4.8 36 9-44 1-37 (147)
309 2gas_A Isoflavone reductase; N 26.3 54 0.0019 29.8 4.2 34 9-46 2-35 (307)
310 2cvz_A Dehydrogenase, 3-hydrox 26.2 37 0.0013 30.8 3.0 31 9-45 1-31 (289)
311 3lzw_A Ferredoxin--NADP reduct 26.1 21 0.00071 33.0 1.2 34 8-46 6-39 (332)
312 1t5b_A Acyl carrier protein ph 26.0 67 0.0023 27.1 4.5 38 9-46 1-44 (201)
313 3m6m_D Sensory/regulatory prot 26.0 78 0.0027 24.7 4.6 36 113-150 53-99 (143)
314 3qvl_A Putative hydantoin race 26.0 2.7E+02 0.0094 24.5 8.6 40 105-147 57-97 (245)
315 2xdo_A TETX2 protein; tetracyc 25.8 49 0.0017 31.7 3.9 33 8-45 25-57 (398)
316 1mv8_A GMD, GDP-mannose 6-dehy 25.8 60 0.0021 31.7 4.6 31 10-45 1-31 (436)
317 3t6k_A Response regulator rece 25.8 1.1E+02 0.0037 23.6 5.4 42 108-151 38-88 (136)
318 3lou_A Formyltetrahydrofolate 25.7 1.9E+02 0.0064 26.5 7.5 102 8-147 94-199 (292)
319 2x4g_A Nucleoside-diphosphate- 25.6 52 0.0018 30.5 4.0 35 8-46 12-46 (342)
320 2gf2_A Hibadh, 3-hydroxyisobut 25.6 45 0.0015 30.4 3.4 31 10-45 1-31 (296)
321 2h31_A Multifunctional protein 25.5 2.6E+02 0.0088 27.2 8.7 139 275-459 264-412 (425)
322 1qyd_A Pinoresinol-lariciresin 25.5 69 0.0024 29.2 4.7 34 9-46 4-37 (313)
323 3hr8_A Protein RECA; alpha and 25.0 3.3E+02 0.011 25.6 9.5 37 12-48 64-100 (356)
324 3oh8_A Nucleoside-diphosphate 25.0 51 0.0017 33.0 4.0 34 9-46 147-180 (516)
325 3eod_A Protein HNR; response r 25.0 1.5E+02 0.005 22.3 6.0 39 1-45 1-39 (130)
326 2rh8_A Anthocyanidin reductase 25.0 52 0.0018 30.5 3.8 32 10-45 10-41 (338)
327 2ph1_A Nucleotide-binding prot 25.0 75 0.0026 28.3 4.8 42 8-49 16-59 (262)
328 3uf0_A Short-chain dehydrogena 24.8 2.9E+02 0.0099 24.5 8.8 34 10-46 31-64 (273)
329 1y1p_A ARII, aldehyde reductas 24.7 66 0.0023 29.6 4.5 35 8-46 10-44 (342)
330 1sqs_A Conserved hypothetical 24.7 72 0.0024 28.1 4.5 37 9-45 1-41 (242)
331 1pno_A NAD(P) transhydrogenase 24.6 74 0.0025 26.4 4.0 34 11-46 25-63 (180)
332 1orr_A CDP-tyvelose-2-epimeras 24.3 52 0.0018 30.5 3.7 33 9-45 1-33 (347)
333 2i2c_A Probable inorganic poly 24.3 24 0.00082 32.1 1.2 27 358-384 37-69 (272)
334 1cp2_A CP2, nitrogenase iron p 24.2 69 0.0024 28.5 4.4 36 11-46 3-38 (269)
335 1d4o_A NADP(H) transhydrogenas 24.1 76 0.0026 26.5 4.0 34 11-46 24-62 (184)
336 2vzf_A NADH-dependent FMN redu 24.0 71 0.0024 27.1 4.2 37 9-45 2-42 (197)
337 3gg2_A Sugar dehydrogenase, UD 24.0 52 0.0018 32.4 3.7 32 10-46 3-34 (450)
338 3l77_A Short-chain alcohol deh 23.9 82 0.0028 27.3 4.8 34 10-46 2-35 (235)
339 3r9u_A Thioredoxin reductase; 23.8 34 0.0012 31.2 2.2 34 7-45 2-36 (315)
340 2hpv_A FMN-dependent NADH-azor 23.8 73 0.0025 27.1 4.3 37 9-45 1-44 (208)
341 2pn1_A Carbamoylphosphate synt 23.8 90 0.0031 28.8 5.2 33 8-46 3-37 (331)
342 1ydh_A AT5G11950; structural g 23.5 1E+02 0.0036 26.8 5.1 39 8-46 8-50 (216)
343 3u9t_A MCC alpha, methylcroton 23.5 1.7E+02 0.0059 30.4 7.7 36 10-50 29-64 (675)
344 3ax6_A Phosphoribosylaminoimid 23.5 1E+02 0.0036 29.1 5.7 33 9-46 1-33 (380)
345 2an1_A Putative kinase; struct 23.3 34 0.0012 31.4 2.0 31 352-384 61-95 (292)
346 2b69_A UDP-glucuronate decarbo 23.2 59 0.002 30.2 3.8 34 8-45 26-59 (343)
347 2q3e_A UDP-glucose 6-dehydroge 23.1 67 0.0023 31.7 4.3 33 8-45 4-38 (467)
348 2y0c_A BCEC, UDP-glucose dehyd 23.1 55 0.0019 32.6 3.7 33 8-45 7-39 (478)
349 3cg4_A Response regulator rece 23.1 1.4E+02 0.0047 22.8 5.6 39 1-45 1-39 (142)
350 4g6h_A Rotenone-insensitive NA 23.0 42 0.0014 33.6 2.8 34 8-46 41-74 (502)
351 4e5v_A Putative THUA-like prot 23.0 86 0.0029 28.6 4.7 38 8-46 3-43 (281)
352 2qk4_A Trifunctional purine bi 22.9 1.8E+02 0.0062 28.2 7.5 32 10-46 25-57 (452)
353 1f4p_A Flavodoxin; electron tr 22.7 77 0.0026 25.1 4.0 36 10-45 1-37 (147)
354 1rtt_A Conserved hypothetical 22.6 79 0.0027 26.6 4.2 37 8-45 5-44 (193)
355 3kkj_A Amine oxidase, flavin-c 22.5 47 0.0016 28.9 2.9 28 12-44 5-32 (336)
356 2dwc_A PH0318, 433AA long hypo 22.4 1.4E+02 0.0049 28.7 6.6 35 8-47 18-52 (433)
357 3ea0_A ATPase, para family; al 22.4 67 0.0023 28.0 3.8 39 8-46 2-43 (245)
358 4e3z_A Putative oxidoreductase 22.3 2.3E+02 0.008 25.0 7.7 35 8-45 24-58 (272)
359 1u0t_A Inorganic polyphosphate 22.3 31 0.0011 32.1 1.6 31 352-384 73-107 (307)
360 2z04_A Phosphoribosylaminoimid 22.2 82 0.0028 29.6 4.7 34 9-47 1-34 (365)
361 3alj_A 2-methyl-3-hydroxypyrid 22.2 59 0.002 30.8 3.7 33 8-45 10-42 (379)
362 3op4_A 3-oxoacyl-[acyl-carrier 22.0 1.3E+02 0.0045 26.4 5.7 42 1-46 1-42 (248)
363 3orf_A Dihydropteridine reduct 22.0 90 0.0031 27.5 4.6 36 8-46 20-55 (251)
364 2jk1_A HUPR, hydrogenase trans 22.0 2E+02 0.0068 21.9 6.4 48 375-437 71-118 (139)
365 3ga2_A Endonuclease V; alpha-b 21.9 1E+02 0.0034 27.5 4.6 39 109-147 98-143 (246)
366 2f1k_A Prephenate dehydrogenas 21.9 61 0.0021 29.1 3.5 31 10-45 1-31 (279)
367 2fsv_C NAD(P) transhydrogenase 21.9 87 0.003 26.6 4.0 34 11-46 48-86 (203)
368 1weh_A Conserved hypothetical 21.9 85 0.0029 26.2 4.1 37 10-46 2-42 (171)
369 4iiu_A 3-oxoacyl-[acyl-carrier 21.8 2.7E+02 0.0093 24.4 8.0 35 9-46 25-59 (267)
370 1qyc_A Phenylcoumaran benzylic 21.8 79 0.0027 28.6 4.3 34 9-46 4-37 (308)
371 3guy_A Short-chain dehydrogena 21.7 73 0.0025 27.6 3.9 34 10-46 1-34 (230)
372 3kbq_A Protein TA0487; structu 21.7 1.9E+02 0.0065 24.1 6.2 51 9-59 3-59 (172)
373 3e1t_A Halogenase; flavoprotei 21.6 39 0.0013 33.8 2.3 34 8-46 6-39 (512)
374 2bi7_A UDP-galactopyranose mut 21.6 61 0.0021 31.0 3.6 34 8-46 2-35 (384)
375 1yt5_A Inorganic polyphosphate 21.6 29 0.00097 31.4 1.1 29 354-384 41-72 (258)
376 3sty_A Methylketone synthase 1 21.5 88 0.003 27.0 4.5 36 11-46 13-48 (267)
377 3qua_A Putative uncharacterize 21.5 1.3E+02 0.0044 25.9 5.2 37 8-45 21-61 (199)
378 1u0t_A Inorganic polyphosphate 21.5 88 0.003 28.9 4.5 39 8-46 3-42 (307)
379 3nbm_A PTS system, lactose-spe 21.5 87 0.003 23.9 3.7 37 8-44 5-41 (108)
380 3uve_A Carveol dehydrogenase ( 21.5 3.2E+02 0.011 24.2 8.5 33 10-45 11-43 (286)
381 2i87_A D-alanine-D-alanine lig 21.4 41 0.0014 31.9 2.3 38 8-45 2-43 (364)
382 2gkg_A Response regulator homo 21.4 1.2E+02 0.004 22.6 4.7 48 374-438 78-125 (127)
383 1djl_A Transhydrogenase DIII; 21.4 89 0.0031 26.6 4.0 34 11-46 47-85 (207)
384 3s40_A Diacylglycerol kinase; 21.4 1.3E+02 0.0043 27.7 5.6 40 8-47 7-49 (304)
385 3f8d_A Thioredoxin reductase ( 21.4 61 0.0021 29.5 3.4 32 10-46 16-47 (323)
386 3obi_A Formyltetrahydrofolate 21.4 1.9E+02 0.0065 26.4 6.7 110 6-150 86-197 (288)
387 1e4e_A Vancomycin/teicoplanin 21.3 51 0.0017 30.9 2.9 38 8-45 2-43 (343)
388 3ka7_A Oxidoreductase; structu 21.3 56 0.0019 31.4 3.3 31 10-45 1-31 (425)
389 3pgx_A Carveol dehydrogenase; 21.3 3.4E+02 0.012 24.0 8.6 33 10-45 15-47 (280)
390 3qvo_A NMRA family protein; st 21.2 44 0.0015 29.2 2.3 20 27-46 37-57 (236)
391 3end_A Light-independent proto 21.2 1E+02 0.0034 28.2 4.9 39 8-46 39-78 (307)
392 3bfv_A CAPA1, CAPB2, membrane 21.1 1E+02 0.0034 27.8 4.8 39 8-46 80-120 (271)
393 3lac_A Pyrrolidone-carboxylate 21.1 69 0.0023 28.0 3.4 27 9-35 1-29 (215)
394 1qo0_D AMIR; binding protein, 21.1 2.3E+02 0.0078 23.3 6.9 48 375-438 78-125 (196)
395 3f67_A Putative dienelactone h 21.0 1.1E+02 0.0039 25.8 5.1 36 10-45 32-67 (241)
396 1v0j_A UDP-galactopyranose mut 21.0 49 0.0017 31.8 2.8 33 8-45 6-39 (399)
397 3l18_A Intracellular protease 21.0 1.9E+02 0.0067 23.3 6.3 38 8-46 1-38 (168)
398 2gdz_A NAD+-dependent 15-hydro 21.0 1.6E+02 0.0055 26.0 6.2 33 11-46 8-40 (267)
399 3c85_A Putative glutathione-re 20.9 48 0.0016 27.6 2.4 33 9-46 39-72 (183)
400 2afh_E Nitrogenase iron protei 20.8 1E+02 0.0034 27.9 4.8 36 11-46 4-39 (289)
401 2xij_A Methylmalonyl-COA mutas 20.7 2.1E+02 0.0073 30.1 7.6 39 8-46 603-641 (762)
402 1oi4_A Hypothetical protein YH 20.7 1.8E+02 0.0063 24.3 6.2 38 8-46 22-59 (193)
403 3c7a_A Octopine dehydrogenase; 20.7 32 0.0011 33.2 1.4 31 9-44 2-33 (404)
404 2rcy_A Pyrroline carboxylate r 20.7 36 0.0012 30.4 1.6 33 8-45 3-39 (262)
405 3ucx_A Short chain dehydrogena 20.6 3.8E+02 0.013 23.5 8.6 33 10-45 11-43 (264)
406 1o97_C Electron transferring f 20.5 1.1E+02 0.0037 27.7 4.8 42 107-150 101-148 (264)
407 3i7m_A XAA-Pro dipeptidase; st 20.5 61 0.0021 25.7 2.8 32 21-52 1-32 (140)
408 3t7c_A Carveol dehydrogenase; 20.3 3.8E+02 0.013 24.1 8.7 33 10-45 28-60 (299)
409 3dii_A Short-chain dehydrogena 20.2 1E+02 0.0035 27.0 4.6 34 10-46 2-35 (247)
410 3enk_A UDP-glucose 4-epimerase 20.2 80 0.0027 29.1 4.0 34 8-45 4-37 (341)
411 1fjh_A 3alpha-hydroxysteroid d 20.1 1E+02 0.0035 27.0 4.6 33 10-45 1-33 (257)
412 1rpn_A GDP-mannose 4,6-dehydra 20.1 1E+02 0.0035 28.3 4.8 35 8-46 13-47 (335)
413 2ywl_A Thioredoxin reductase r 20.1 66 0.0023 26.5 3.1 32 10-46 2-33 (180)
414 2vou_A 2,6-dihydroxypyridine h 20.0 80 0.0027 30.1 4.1 33 8-45 4-36 (397)
415 3sju_A Keto reductase; short-c 20.0 2.7E+02 0.0093 24.7 7.6 34 10-46 24-57 (279)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.2e-64 Score=509.82 Aligned_cols=427 Identities=25% Similarity=0.401 Sum_probs=337.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCC--CeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCc
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHG--AAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCE 85 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~ 85 (488)
+++||+++|+|++||++|++.||+.|+++| +.|||++++.+...+.+... ....+|+|+.+| ++++++.+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ip-----dglp~~~~ 83 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVH-----DGLPKGYV 83 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECC-----CCCCTTCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecC-----CCCCCCcc
Confidence 689999999999999999999999999999 99999999855444322110 012469999987 47777665
Q ss_pred cccCCCchhhHHHHHHHHH-HhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHHHHHHhhhccc
Q 011339 86 NFDMLHSTDLVSNFFKSLR-LLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTS 164 (488)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 164 (488)
.... ....+..+..... .+.+.+.+++++.+.++|+||+|.+++|+..+|+++|||++.|++++++.+.++++.+..
T Consensus 84 ~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 84 SSGN--PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CCSC--TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccCC--hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 4332 1233444444433 455666666655446899999999999999999999999999999999998887775432
Q ss_pred ccc-c--ccCCCCCccccCCCCCcccccccc--------chHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHhhcC
Q 011339 165 TVQ-E--NVTSNSDYLVVPGLPDQIEMTKVR--------EKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKKTKG 233 (488)
Q Consensus 165 ~~~-~--~~~~~~~~~~~p~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~ 233 (488)
... . ..........+||+|. +....+. ..+..++.+..+...+.+++++||+++||+++++.++..+
T Consensus 162 ~~~~~~~~~~~~~~~~~iPg~p~-~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~- 239 (454)
T 3hbf_A 162 REKTGSKEVHDVKSIDVLPGFPE-LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF- 239 (454)
T ss_dssp HHTCCHHHHTTSSCBCCSTTSCC-BCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-
T ss_pred HhhcCCCccccccccccCCCCCC-cChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-
Confidence 111 0 0011122234788764 3222211 2345566666677788999999999999999999888766
Q ss_pred CceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEe
Q 011339 234 GKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIR 313 (488)
Q Consensus 234 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~ 313 (488)
+++++|||++...+.. .+..+.++.+||+.++++++|||||||+...+.+++.+++.+++..+.+|||+++
T Consensus 240 ~~v~~vGPl~~~~~~~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~ 310 (454)
T 3hbf_A 240 KLLLNVGPFNLTTPQR---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFR 310 (454)
T ss_dssp SCEEECCCHHHHSCCS---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECC
T ss_pred CCEEEECCcccccccc---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Confidence 7999999997543211 1124578999999988899999999999998899999999999999999999998
Q ss_pred CCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhHH
Q 011339 314 GGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNEK 393 (488)
Q Consensus 314 ~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na~ 393 (488)
... ... +|+++.++. ++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|+++||+.||+
T Consensus 311 ~~~-----~~~--lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~ 382 (454)
T 3hbf_A 311 GDP-----KEK--LPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTI 382 (454)
T ss_dssp SCH-----HHH--SCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred Ccc-----hhc--CCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHH
Confidence 653 122 677775544 468888899999999999998889999999999999999999999999999999999
Q ss_pred HHHHH-hcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 011339 394 LIVQV-LNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKL 472 (488)
Q Consensus 394 rv~e~-~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 472 (488)
+++ + +|+|+.++.. .+++++|.++|+++|+| +++++||+||+++++++++++++|||+..++++
T Consensus 383 ~v~-~~~g~Gv~l~~~-------------~~~~~~l~~av~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~ 447 (454)
T 3hbf_A 383 LTE-SVLEIGVGVDNG-------------VLTKESIKKALELTMSS-EKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTT 447 (454)
T ss_dssp HHH-TTSCSEEECGGG-------------SCCHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred HHH-HhhCeeEEecCC-------------CCCHHHHHHHHHHHHCC-ChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHH
Confidence 995 7 6999999865 59999999999999986 456689999999999999999999999999999
Q ss_pred HHHHHH
Q 011339 473 LIQDIM 478 (488)
Q Consensus 473 ~i~~~~ 478 (488)
||++|.
T Consensus 448 ~v~~i~ 453 (454)
T 3hbf_A 448 LIQIVT 453 (454)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999985
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.9e-60 Score=487.73 Aligned_cols=450 Identities=29% Similarity=0.516 Sum_probs=318.1
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCC-CCeEEEEeeCCccccC
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSG-LPLQLIEIQFPYQEAG 79 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~ 79 (488)
|++.+. +++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+........+ .+++|+.++ ++
T Consensus 1 ~~~~~~-~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~ 74 (482)
T 2pq6_A 1 MGNFAN-RKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DG 74 (482)
T ss_dssp --------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CC
T ss_pred CCcccC-CCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CC
Confidence 665532 57899999999999999999999999999999999999876655433211100011 378998887 24
Q ss_pred CCCCCccccCCCchhhHHHHHHHH-HHhhHHHHHHHHhc-----CCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHH
Q 011339 80 VPEGCENFDMLHSTDLVSNFFKSL-RLLQLPLENLLKEL-----TPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCF 153 (488)
Q Consensus 80 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~ 153 (488)
+++......... + +..+.... ..+...+.++++.. ..+||+||+|.+++|+..+|+.+|||++.+++++++
T Consensus 75 lp~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~ 151 (482)
T 2pq6_A 75 LTPMEGDGDVSQ--D-VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSAC 151 (482)
T ss_dssp CC---------C--C-HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHH
T ss_pred CCCcccccCcch--h-HHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHH
Confidence 444110011011 1 12233332 34455566666542 258999999999999999999999999999999887
Q ss_pred HHHHHhhhccc-----ccccccC--C----CCCccccCCCCCccccccc---------cchHHHHHHHHHhhccccceEE
Q 011339 154 CLLCLYNLHTS-----TVQENVT--S----NSDYLVVPGLPDQIEMTKV---------REKWKDFGEMVLAADMKSYGII 213 (488)
Q Consensus 154 ~~~~~~~~~~~-----~~~~~~~--~----~~~~~~~p~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l 213 (488)
.+..+.+++.. .+..... . ......+|+++. ++...+ ...+...+....+...+.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl 230 (482)
T 2pq6_A 152 SLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN-FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTIL 230 (482)
T ss_dssp HHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS-CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEE
T ss_pred HHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC-CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEE
Confidence 76665433311 0100000 0 011123455542 111111 1223334444556677889999
Q ss_pred EcCchhhhHHHHHHHHhhcCCceEEeCCCCCC-CCCcchhhhhC--CCCcccchhhhcccCCCCCCeEEEEeeCCccCCC
Q 011339 214 INTFEELELEYVKECKKTKGGKVWCLGPVSLC-NKQDIDKAERG--KKAAVDISECLNWLDSWPPNSVVYVCLGSICNLT 290 (488)
Q Consensus 214 ~~s~~~le~~~~~~~~~~~~~~~~~vGpl~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~ 290 (488)
+|++++||+++++.+++.+ +++++|||++.. +.......... ...|..+.++.+|++.++++++||||+||....+
T Consensus 231 ~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~ 309 (482)
T 2pq6_A 231 LNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMT 309 (482)
T ss_dssp ESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCC
T ss_pred EcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCC
Confidence 9999999999999888777 899999999753 11100000000 1122345678999999888899999999998888
Q ss_pred hHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHH
Q 011339 291 SSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSL 370 (488)
Q Consensus 291 ~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~ 370 (488)
.+++.+++.+++..+.+|||+++... ....... +|+++.++. ++|+++.+|+||.++|+|+++++||||||+||++
T Consensus 310 ~~~~~~~~~~l~~~~~~~l~~~~~~~-~~~~~~~--l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~ 385 (482)
T 2pq6_A 310 PEQLLEFAWGLANCKKSFLWIIRPDL-VIGGSVI--FSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTT 385 (482)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCGGG-STTTGGG--SCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCcEEEEEcCCc-ccccccc--CcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHH
Confidence 88899999999999999999987542 1111111 566665554 5689999999999999999999999999999999
Q ss_pred HHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHH
Q 011339 371 EGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAR 450 (488)
Q Consensus 371 eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~ 450 (488)
|++++|||+|++|+++||+.||+++++++|+|+.++ . .+++++|.++|+++|+|++ +++||+||+
T Consensus 386 Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~ 450 (482)
T 2pq6_A 386 ESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T-------------NVKREELAKLINEVIAGDK-GKKMKQKAM 450 (482)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S-------------SCCHHHHHHHHHHHHTSHH-HHHHHHHHH
T ss_pred HHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C-------------CCCHHHHHHHHHHHHcCCc-HHHHHHHHH
Confidence 999999999999999999999999943799999998 4 4999999999999998763 567999999
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 011339 451 EFQIMAKRATEETRSSSLMIKLLIQDIMQQ 480 (488)
Q Consensus 451 ~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~ 480 (488)
++++.+++++++|||+..++++||+++...
T Consensus 451 ~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 451 ELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998543
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=9.4e-59 Score=477.29 Aligned_cols=443 Identities=28% Similarity=0.453 Sum_probs=319.0
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCCcc--hhhhHHHHHhhhcCCCCeEEEEeeCCccc
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQH-GAAITIVTTPAN--AARFKTVVARAMQSGLPLQLIEIQFPYQE 77 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~r-GH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 77 (488)
|+.. +++||+++|+|++||++|++.||++|++| ||+|||++++.+ ...+.+.. . ....+++|+.++...
T Consensus 1 M~~~---~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~-~--~~~~~i~~~~l~~~~-- 72 (480)
T 2vch_A 1 MEES---KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVL-D--SLPSSISSVFLPPVD-- 72 (480)
T ss_dssp --------CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHH-C---CCTTEEEEECCCCC--
T ss_pred CCCC---CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhc-c--ccCCCceEEEcCCCC--
Confidence 5444 77999999999999999999999999998 999999999863 33333210 0 012479999887431
Q ss_pred cCCCCCCccccCCCchhhHHHHHHHHHHhhHHHHHHHHhc--CCCC-eEEEEcCCCcchHHHHHhcCCCcEEEecchHHH
Q 011339 78 AGVPEGCENFDMLHSTDLVSNFFKSLRLLQLPLENLLKEL--TPKP-SCIVSDTCYPWTVDTAARFNIPRISFHGFSCFC 154 (488)
Q Consensus 78 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~p-D~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~ 154 (488)
+++ .. .. ......+......+...+.+++++. ..++ |+||+|.+..|+..+|+++|||++.+++++++.
T Consensus 73 --~~~-~~---~~--~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 144 (480)
T 2vch_A 73 --LTD-LS---SS--TRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANV 144 (480)
T ss_dssp --CTT-SC---TT--CCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHH
T ss_pred --CCC-CC---Cc--hhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHH
Confidence 111 10 01 1222333344455566677776652 2478 999999999899999999999999999999887
Q ss_pred HHHHhhhccccc--ccccCCCCCccccCCCCCcc--cccc-c-c--chHHHHHHHHHhhccccceEEEcCchhhhHHHHH
Q 011339 155 LLCLYNLHTSTV--QENVTSNSDYLVVPGLPDQI--EMTK-V-R--EKWKDFGEMVLAADMKSYGIIINTFEELELEYVK 226 (488)
Q Consensus 155 ~~~~~~~~~~~~--~~~~~~~~~~~~~p~l~~~~--~~~~-~-~--~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~ 226 (488)
+..+++++.... ............+|+++... .++. . . ..+...+.+..+..++..++++|++.+||+....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~ 224 (480)
T 2vch_A 145 LSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIK 224 (480)
T ss_dssp HHHHHHHHHHHHHCCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHH
T ss_pred HHHHHHHHHHHhcCCCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHH
Confidence 766655432110 00000001123445554311 0110 0 0 1122223333445667889999999999988777
Q ss_pred HHHhhc--CCceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcC
Q 011339 227 ECKKTK--GGKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS 304 (488)
Q Consensus 227 ~~~~~~--~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~ 304 (488)
.+.++. .+++++|||++...... ..+..+.++.+|++.++++++|||||||+...+.+++.+++.+++..
T Consensus 225 ~l~~~~~~~~~v~~vGpl~~~~~~~--------~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~ 296 (480)
T 2vch_A 225 ALQEPGLDKPPVYPVGPLVNIGKQE--------AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADS 296 (480)
T ss_dssp HHHSCCTTCCCEEECCCCCCCSCSC--------C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCcEEEEeccccccccc--------cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhc
Confidence 776421 26899999997643210 00124678999999988889999999999988889999999999999
Q ss_pred CCCeEEEEeCCCCC----------chhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhh
Q 011339 305 KKPFIWVIRGGNNT----------SKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGIS 374 (488)
Q Consensus 305 ~~~~v~~~~~~~~~----------~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~ 374 (488)
+.+|||+++..... ...+.+. +|+++.++....++++.+|+||.+||+|+++++||||||+||++|+++
T Consensus 297 ~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~ 375 (480)
T 2vch_A 297 EQRFLWVIRSPSGIANSSYFDSHSQTDPLTF-LPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVV 375 (480)
T ss_dssp TCEEEEEECCCCSSTTTTTTCC--CSCGGGG-SCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHH
T ss_pred CCcEEEEECCccccccccccccccccchhhh-cCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHH
Confidence 99999999764300 0112112 788887777666777777999999999999888999999999999999
Q ss_pred cCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHH
Q 011339 375 AGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQI 454 (488)
Q Consensus 375 ~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~ 454 (488)
+|||||++|+++||+.||+++++++|+|+.++..+ ++.+++++|+++|+++|+++ +..+||+||+++++
T Consensus 376 ~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~----------~~~~~~~~l~~av~~vl~~~-~~~~~r~~a~~l~~ 444 (480)
T 2vch_A 376 SGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD----------DGLVRREEVARVVKGLMEGE-EGKGVRNKMKELKE 444 (480)
T ss_dssp HTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT----------TSCCCHHHHHHHHHHHHTST-HHHHHHHHHHHHHH
T ss_pred cCCCEEeccccccchHHHHHHHHHhCeEEEeeccc----------CCccCHHHHHHHHHHHhcCc-chHHHHHHHHHHHH
Confidence 99999999999999999999635999999997531 12489999999999999843 34599999999999
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHc
Q 011339 455 MAKRATEETRSSSLMIKLLIQDIMQ 479 (488)
Q Consensus 455 ~~~~~~~~gg~~~~~~~~~i~~~~~ 479 (488)
++++++++||++..++++||+.+.+
T Consensus 445 ~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 445 AACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999865
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.3e-58 Score=474.48 Aligned_cols=440 Identities=26% Similarity=0.412 Sum_probs=321.9
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCcch-hhhHHHHHhhhcCCCCeEEEEeeCCccc
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTPANA-ARFKTVVARAMQSGLPLQLIEIQFPYQE 77 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 77 (488)
|++..+.+++||+++|+|++||++|++.||++|++| ||+|||++++.+. ..+.+.+......+.+++|+.+|..
T Consensus 1 ~~~~~~~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~--- 77 (463)
T 2acv_A 1 MSMSDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV--- 77 (463)
T ss_dssp --CHHHHHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC---
T ss_pred CCcccCCCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC---
Confidence 444432267899999999999999999999999999 9999999998653 2122322221122357999998743
Q ss_pred cCCCCCCccccCCCchhhHHHHHHHHHHhhHHHHHHHHh-cCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHHHH
Q 011339 78 AGVPEGCENFDMLHSTDLVSNFFKSLRLLQLPLENLLKE-LTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFCLL 156 (488)
Q Consensus 78 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~ 156 (488)
.+++. +.. ...+.. +..........+++++++ ...+||+||+|.++.|+..+|+++|||++.+++++++.+.
T Consensus 78 -~~~~~-~~~---~~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 150 (463)
T 2acv_A 78 -EPPPQ-ELL---KSPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLS 150 (463)
T ss_dssp -CCCCG-GGG---GSHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHH
T ss_pred -CCCcc-ccc---CCccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHH
Confidence 12221 100 111222 444445566677777766 2358999999999999999999999999999999988877
Q ss_pred HHhhhcccccccccCCCCC---ccccCCC-CCcccccccc------chHHHHHHHHHhhccccceEEEcCchhhhHHHHH
Q 011339 157 CLYNLHTSTVQENVTSNSD---YLVVPGL-PDQIEMTKVR------EKWKDFGEMVLAADMKSYGIIINTFEELELEYVK 226 (488)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~---~~~~p~l-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~ 226 (488)
.+++++.......+..... +..+|++ +. +....+. ..+...+.+.....++..++++|++++||+...+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~ 229 (463)
T 2acv_A 151 LMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQ-VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSID 229 (463)
T ss_dssp HHHHGGGSCTTCCCCCSSGGGCEECCTTCSSC-EEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHH
T ss_pred HHHHHHhhcccCCCCCccccCceeECCCCCCC-CChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHH
Confidence 7666543221111111122 4456776 33 2211111 0122222333344567888999999999998877
Q ss_pred HHHhhc--CCceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCcc-CCChHHHHHHHHHHhc
Q 011339 227 ECKKTK--GGKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSIC-NLTSSQMIELGLGLEA 303 (488)
Q Consensus 227 ~~~~~~--~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~-~~~~~~~~~~~~a~~~ 303 (488)
.+.+.. ++++++|||++........ . ..|..+.++.+|++.++++++||||+||.. ..+.+++.+++.+++.
T Consensus 230 ~l~~~~~p~~~v~~vGpl~~~~~~~~~----~-~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~ 304 (463)
T 2acv_A 230 ALYDHDEKIPPIYAVGPLLDLKGQPNP----K-LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKH 304 (463)
T ss_dssp HHHHHCTTSCCEEECCCCCCSSCCCBT----T-BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHH
T ss_pred HHHhccccCCcEEEeCCCccccccccc----c-cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHh
Confidence 776644 5799999999754310100 0 001245789999999888899999999999 7778889999999999
Q ss_pred CCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhc-CCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeec
Q 011339 304 SKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVK-GRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITW 382 (488)
Q Consensus 304 ~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~ 382 (488)
.+.+|||+++.+. . . +|+++.++.. ++|+++.+|+||.++|+|+++++||||||+||++|++++|||+|++
T Consensus 305 ~~~~~l~~~~~~~-~-----~--l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~ 376 (463)
T 2acv_A 305 SGVRFLWSNSAEK-K-----V--FPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTW 376 (463)
T ss_dssp HTCEEEEECCCCG-G-----G--SCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred CCCcEEEEECCCc-c-----c--CChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeec
Confidence 9999999998641 0 0 5666654431 4588888999999999999999999999999999999999999999
Q ss_pred CcccccchhHHHHHHHhcceEEe-cccCCCCCCccccccc--ccCHHHHHHHHHHHHc-cCcchHHHHHHHHHHHHHHHH
Q 011339 383 PLYGDQFWNEKLIVQVLNIGVRI-GVEVPLDFGEEEEIGV--LVKKEDVVKAINILMD-EGGETDDRRKRAREFQIMAKR 458 (488)
Q Consensus 383 P~~~DQ~~na~rv~e~~G~G~~l-~~~~~~~~~~~~~~~~--~~~~~~l~~ai~~~l~-~~~~~~~~~~~a~~l~~~~~~ 458 (488)
|+++||+.||+++++++|+|+.+ +..+ .. .+++++|.++|+++|+ ++ +||+||+++++.+++
T Consensus 377 P~~~dQ~~Na~~lv~~~g~g~~l~~~~~----------~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~ 442 (463)
T 2acv_A 377 PIYAEQQLNAFRLVKEWGVGLGLRVDYR----------KGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRN 442 (463)
T ss_dssp CCSTTHHHHHHHHHHTSCCEEESCSSCC----------TTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHcCeEEEEecccC----------CCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHH
Confidence 99999999999942599999999 3110 01 4899999999999997 34 899999999999999
Q ss_pred HHhcCCchHHHHHHHHHHHH
Q 011339 459 ATEETRSSSLMIKLLIQDIM 478 (488)
Q Consensus 459 ~~~~gg~~~~~~~~~i~~~~ 478 (488)
++++|||+..++++||+++.
T Consensus 443 a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 443 AVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HTSTTSHHHHHHHHHHHHHH
T ss_pred HHhcCCcHHHHHHHHHHHhc
Confidence 99999999999999999985
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.5e-58 Score=471.11 Aligned_cols=434 Identities=24% Similarity=0.413 Sum_probs=315.7
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCe--EEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCcccc
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAA--ITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEA 78 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 78 (488)
|+.++ +++||+++|+|++||++|++.||++|++|||+ |||++++.+...+.+.... ....+++|+.++ +
T Consensus 1 m~~~~--~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~-----~ 71 (456)
T 2c1x_A 1 MSQTT--TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDIS-----D 71 (456)
T ss_dssp --------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECC-----C
T ss_pred CCCCC--CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCC-----C
Confidence 67666 78999999999999999999999999999765 5778887443332221100 002378898876 3
Q ss_pred CCCCCCccccCCCchhhHHHHHHHH-HHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHHHHH
Q 011339 79 GVPEGCENFDMLHSTDLVSNFFKSL-RLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFCLLC 157 (488)
Q Consensus 79 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~ 157 (488)
+++++.+... .....+..+.... ..+.+.+.+++++.+.+||+||+|.++.|+..+|+++|||++.++++++..+..
T Consensus 72 glp~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 149 (456)
T 2c1x_A 72 GVPEGYVFAG--RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLST 149 (456)
T ss_dssp CCCTTCCCCC--CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHH
T ss_pred CCCCcccccC--ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHH
Confidence 5555432211 1123333343333 233344444443323699999999999999999999999999999998877655
Q ss_pred Hhhhccc----ccccc-cCCCCCccccCCCCCccccccc---------cchHHHHHHHHHhhccccceEEEcCchhhhHH
Q 011339 158 LYNLHTS----TVQEN-VTSNSDYLVVPGLPDQIEMTKV---------REKWKDFGEMVLAADMKSYGIIINTFEELELE 223 (488)
Q Consensus 158 ~~~~~~~----~~~~~-~~~~~~~~~~p~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~ 223 (488)
+.+.+.. ..... ........++|+++. ++...+ ...+...+.++.....+.+++++|++++||++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~-~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~ 228 (456)
T 2c1x_A 150 HVYIDEIREKIGVSGIQGREDELLNFIPGMSK-VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDS 228 (456)
T ss_dssp HHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTT-CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred HhhhHHHHhccCCcccccccccccccCCCCCc-ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHH
Confidence 4432210 00000 001111224566654 221111 12344555555555678899999999999998
Q ss_pred HHHHHHhhcCCceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhc
Q 011339 224 YVKECKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEA 303 (488)
Q Consensus 224 ~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~ 303 (488)
+++.+++.+ +++++|||++...+.. .+..+.++.+|++.++++++||||+||......+++.+++.+++.
T Consensus 229 ~~~~~~~~~-~~~~~vGpl~~~~~~~---------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~ 298 (456)
T 2c1x_A 229 LTNDLKSKL-KTYLNIGPFNLITPPP---------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEA 298 (456)
T ss_dssp HHHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CCEEEecCcccCcccc---------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHh
Confidence 888887766 7899999987542211 011345789999988888999999999998888889999999998
Q ss_pred CCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecC
Q 011339 304 SKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWP 383 (488)
Q Consensus 304 ~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P 383 (488)
.+.+|||+++... ... +|+++.++. +.|+++.+|+||.++|+|+++++||||||+||++|++++|||+|++|
T Consensus 299 ~~~~~lw~~~~~~-----~~~--l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P 370 (456)
T 2c1x_A 299 SRVPFIWSLRDKA-----RVH--LPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRP 370 (456)
T ss_dssp HTCCEEEECCGGG-----GGG--SCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred cCCeEEEEECCcc-----hhh--CCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecC
Confidence 9999999997643 111 566665443 56899999999999999999888999999999999999999999999
Q ss_pred cccccchhHHHHHHHh-cceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhc
Q 011339 384 LYGDQFWNEKLIVQVL-NIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEE 462 (488)
Q Consensus 384 ~~~DQ~~na~rv~e~~-G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~ 462 (488)
++.||+.||++++ +. |+|+.++.. .+++++|.++|+++|+|++ +++||+||+++++.+++++.+
T Consensus 371 ~~~dQ~~Na~~l~-~~~g~g~~l~~~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~ 435 (456)
T 2c1x_A 371 FFGDQRLNGRMVE-DVLEIGVRIEGG-------------VFTKSGLMSCFDQILSQEK-GKKLRENLRALRETADRAVGP 435 (456)
T ss_dssp CSTTHHHHHHHHH-HTSCCEEECGGG-------------SCCHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHHHTST
T ss_pred ChhhHHHHHHHHH-HHhCeEEEecCC-------------CcCHHHHHHHHHHHHCCCc-HHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999995 87 999999765 5999999999999998753 668999999999999999999
Q ss_pred CCchHHHHHHHHHHHHc
Q 011339 463 TRSSSLMIKLLIQDIMQ 479 (488)
Q Consensus 463 gg~~~~~~~~~i~~~~~ 479 (488)
|||+..++++||+++.+
T Consensus 436 gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 436 KGSSTENFITLVDLVSK 452 (456)
T ss_dssp TCHHHHHHHHHHHHHTS
T ss_pred CCcHHHHHHHHHHHHHh
Confidence 99999999999999854
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2e-44 Score=366.87 Aligned_cols=379 Identities=17% Similarity=0.202 Sum_probs=262.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccc
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENF 87 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~ 87 (488)
+||||+|++++++||++|++.||++|+++||+|+|++++.+.+.+.+. +++|+.++.. ++.+....
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~~~~~~~~ 76 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSI-----LPKESNPE 76 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCC-----SCCTTCTT
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCcc-----ccccccch
Confidence 678999999999999999999999999999999999998766555443 7888877631 22221110
Q ss_pred cCCC-c-hhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHHHHHHhhhcccc
Q 011339 88 DMLH-S-TDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTST 165 (488)
Q Consensus 88 ~~~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 165 (488)
.... . ...+..+..........+.+++++ .+||+||+|.+.+++..+|+.+|||++.+++.+............ .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-~ 153 (424)
T 2iya_A 77 ESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPA-V 153 (424)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGG-G
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccc-c
Confidence 0001 1 122233333444566778888877 899999999988899999999999999998765411100000000 0
Q ss_pred cccccCCCCCccccC-CCCCcccc----c---cccchHHHHHHHH------HhhccccceEEEcCchhhhHHHHHHHHhh
Q 011339 166 VQENVTSNSDYLVVP-GLPDQIEM----T---KVREKWKDFGEMV------LAADMKSYGIIINTFEELELEYVKECKKT 231 (488)
Q Consensus 166 ~~~~~~~~~~~~~~p-~l~~~~~~----~---~~~~~~~~~~~~~------~~~~~~~~~~l~~s~~~le~~~~~~~~~~ 231 (488)
...+.........| +......+ + .....+...+.+. .......+.+++++.+.++++ ...
T Consensus 154 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~ 227 (424)
T 2iya_A 154 -QDPTADRGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GDT 227 (424)
T ss_dssp -SCCCC---------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----GGG
T ss_pred -cccccccccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----ccC
Confidence 00000000000000 00000000 0 0001111111110 011114567889998888743 245
Q ss_pred cCCceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEE
Q 011339 232 KGGKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWV 311 (488)
Q Consensus 232 ~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~ 311 (488)
+++++++|||+.... .+..+|++..+++++|||++||......+.+..++++++..+.+++|.
T Consensus 228 ~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~ 290 (424)
T 2iya_A 228 VGDNYTFVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLS 290 (424)
T ss_dssp CCTTEEECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCCCEEEeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 778999999975321 123467776667789999999998666778889999998888899998
Q ss_pred EeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchh
Q 011339 312 IRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWN 391 (488)
Q Consensus 312 ~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~n 391 (488)
++... ....+.+ + +.|+++.+|+||.++|+++++ ||||||+||++|++++|||+|++|...||+.|
T Consensus 291 ~g~~~-~~~~~~~--~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 356 (424)
T 2iya_A 291 VGRFV-DPADLGE--V---------PPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMN 356 (424)
T ss_dssp CCTTS-CGGGGCS--C---------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHH
T ss_pred ECCcC-ChHHhcc--C---------CCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHH
Confidence 87654 2222111 1 468999999999999999998 99999999999999999999999999999999
Q ss_pred HHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHH
Q 011339 392 EKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKR 458 (488)
Q Consensus 392 a~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~ 458 (488)
|+++ ++.|+|+.++.+ .+++++|.++|.++|+|+ +++++++++++.+++
T Consensus 357 a~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 357 AERI-VELGLGRHIPRD-------------QVTAEKLREAVLAVASDP----GVAERLAAVRQEIRE 405 (424)
T ss_dssp HHHH-HHTTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT
T ss_pred HHHH-HHCCCEEEcCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 9999 599999999765 589999999999999988 899999999998764
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.8e-43 Score=354.43 Aligned_cols=368 Identities=17% Similarity=0.150 Sum_probs=234.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCcccc--CCCCCC
Q 011339 7 CQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEA--GVPEGC 84 (488)
Q Consensus 7 ~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~l~~~~ 84 (488)
++.|||+|+++|++||++|+++||++|++|||+|||++++.+.+... .++.++.+....... ..+...
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~ 89 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----------AGLCAVDVSPGVNYAKLFVPDDT 89 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----------TTCEEEESSTTCCSHHHHSCCC-
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----------cCCeeEecCCchhHhhhcccccc
Confidence 36799999999999999999999999999999999999986544221 267777664221110 001110
Q ss_pred ccccCC----Cchh-hHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHHHHHHh
Q 011339 85 ENFDML----HSTD-LVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFCLLCLY 159 (488)
Q Consensus 85 ~~~~~~----~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~ 159 (488)
...... .... ....+..........+.+++++ ++||+||+|.+++++..+|+.+|||++.+...+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~-- 165 (400)
T 4amg_A 90 DVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG-- 165 (400)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH--
T ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccc--
Confidence 000000 0011 1122223334455667778888 899999999999999999999999999865442211000
Q ss_pred hhcccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHH-h-hcCCceE
Q 011339 160 NLHTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECK-K-TKGGKVW 237 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~-~-~~~~~~~ 237 (488)
+... ....+.....+..-............... ...... . ...+...
T Consensus 166 ----------------------~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 214 (400)
T 4amg_A 166 ----------------------LGAL-----IRRAMSKDYERHGVTGEPTGSVRLTTTPP----SVEALLPEDRRSPGAW 214 (400)
T ss_dssp ----------------------HHHH-----HHHHTHHHHHHTTCCCCCSCEEEEECCCH----HHHHTSCGGGCCTTCE
T ss_pred ----------------------hhhH-----HHHHHHHHHHHhCCCcccccchhhcccCc----hhhccCcccccCCccc
Confidence 0000 00001111111110011111111211111 111000 0 0112222
Q ss_pred EeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCC--hHHHHHHHHHHhcCCCCeEEEEeCC
Q 011339 238 CLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLT--SSQMIELGLGLEASKKPFIWVIRGG 315 (488)
Q Consensus 238 ~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~--~~~~~~~~~a~~~~~~~~v~~~~~~ 315 (488)
.+.+.... ....+.+|++..+++++||||+||+.... .+.+..++++++..+..+||..++.
T Consensus 215 ~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~ 278 (400)
T 4amg_A 215 PMRYVPYN----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGG 278 (400)
T ss_dssp ECCCCCCC----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTT
T ss_pred Cccccccc----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCc
Confidence 22222111 23455578888888999999999987743 3567889999999999999998766
Q ss_pred CCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhHHHH
Q 011339 316 NNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNEKLI 395 (488)
Q Consensus 316 ~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv 395 (488)
. . ..... + ++|+++.+|+||.++|+++++ ||||||+||++|++++|||+|++|+++||+.||+++
T Consensus 279 ~-~-~~~~~--~---------~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v 343 (400)
T 4amg_A 279 D-L-ALLGE--L---------PANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL 343 (400)
T ss_dssp C-C-CCCCC--C---------CTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH
T ss_pred c-c-ccccc--C---------CCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH
Confidence 4 1 11111 2 469999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 011339 396 VQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQ 475 (488)
Q Consensus 396 ~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~ 475 (488)
+++|+|+.++.. ..+++ +|+++|+|+ +||+||+++++++++. .| . ..+.+.+|
T Consensus 344 -~~~G~g~~l~~~-------------~~~~~----al~~lL~d~----~~r~~a~~l~~~~~~~---~~-~-~~~a~~le 396 (400)
T 4amg_A 344 -TGLGIGFDAEAG-------------SLGAE----QCRRLLDDA----GLREAALRVRQEMSEM---PP-P-AETAAXLV 396 (400)
T ss_dssp -HHHTSEEECCTT-------------TCSHH----HHHHHHHCH----HHHHHHHHHHHHHHTS---CC-H-HHHHHHHH
T ss_pred -HHCCCEEEcCCC-------------CchHH----HHHHHHcCH----HHHHHHHHHHHHHHcC---CC-H-HHHHHHHH
Confidence 599999999876 46654 677889998 9999999999998754 33 2 33445555
Q ss_pred HH
Q 011339 476 DI 477 (488)
Q Consensus 476 ~~ 477 (488)
++
T Consensus 397 ~l 398 (400)
T 4amg_A 397 AL 398 (400)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 8
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=5.5e-40 Score=333.05 Aligned_cols=383 Identities=14% Similarity=0.138 Sum_probs=259.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccc
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENF 87 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~ 87 (488)
+||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. ++.++.++.+... .......
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~---~~~~~~~ 86 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIID---ADAAEVF 86 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTT---CCHHHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccc---cccchhh
Confidence 789999999999999999999999999999999999988666555433 7888887632111 0000000
Q ss_pred cCCCchhhHHH-HHHHHHHhhHHHHHHHHhcCCCCeEEEEc-CCCcchHHHHHhcCCCcEEEecchHHHHHHHhhhcccc
Q 011339 88 DMLHSTDLVSN-FFKSLRLLQLPLENLLKELTPKPSCIVSD-TCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTST 165 (488)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~pD~vv~D-~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 165 (488)
........+.. +..........+.+++++ ++||+||+| .+.+++..+|+.+|||++.+.+....... +...+ .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~--~ 161 (415)
T 3rsc_A 87 GSDDLGVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQ--D 161 (415)
T ss_dssp HSSSSCHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHH--H
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-ccccc--c
Confidence 00011122222 333444556778888888 899999999 67778999999999999998643221000 00000 0
Q ss_pred cccccCCCCCccccCCCCCccccccccchHHHHHHHH------Hhhcccc-ceEEEcCchhhhHHHHHHHHhhcCCceEE
Q 011339 166 VQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMV------LAADMKS-YGIIINTFEELELEYVKECKKTKGGKVWC 238 (488)
Q Consensus 166 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~l~~s~~~le~~~~~~~~~~~~~~~~~ 238 (488)
.........|. .+.+....+......+ ....... +..+....+.++ .....++.++.+
T Consensus 162 --------~~~~~~~~~p~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~ 226 (415)
T 3rsc_A 162 --------MVTLAGTIDPL--DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ-----IAGDTFDDRFVF 226 (415)
T ss_dssp --------HHHHHTCCCGG--GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS-----TTGGGCCTTEEE
T ss_pred --------cccccccCChh--hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC-----CCcccCCCceEE
Confidence 00000000000 0000000111111111 0001111 444544433333 334556778999
Q ss_pred eCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCC
Q 011339 239 LGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNT 318 (488)
Q Consensus 239 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~ 318 (488)
+||+.... .+..+|....+++++|||++||......+.+..++++++..+.+++|.++.+. .
T Consensus 227 vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~-~ 288 (415)
T 3rsc_A 227 VGPCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQV-D 288 (415)
T ss_dssp CCCCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTS-C
T ss_pred eCCCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCC-C
Confidence 99975431 23345655556778999999999877777888999999988889999887654 2
Q ss_pred chhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhHHHHHHH
Q 011339 319 SKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQV 398 (488)
Q Consensus 319 ~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~ 398 (488)
...+.+ + +.|+++.+|+|+.++|+++++ ||||||+||++|++++|+|+|++|...||+.||.++ ++
T Consensus 289 ~~~l~~--~---------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l-~~ 354 (415)
T 3rsc_A 289 PAALGD--L---------PPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRV-DQ 354 (415)
T ss_dssp GGGGCC--C---------CTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HH
T ss_pred hHHhcC--C---------CCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHH-HH
Confidence 222222 2 469999999999999999999 999999999999999999999999999999999999 59
Q ss_pred hcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 011339 399 LNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQ 475 (488)
Q Consensus 399 ~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~ 475 (488)
.|+|..+... .++++.|.++|.++|+|+ +++++++++++.+.. +++...+++.+.+
T Consensus 355 ~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 410 (415)
T 3rsc_A 355 LGLGAVLPGE-------------KADGDTLLAAVGAVAADP----ALLARVEAMRGHVRR----AGGAARAADAVEA 410 (415)
T ss_dssp HTCEEECCGG-------------GCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHH----SCHHHHHHHHHHH
T ss_pred cCCEEEcccC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 9999999876 589999999999999998 999999999888654 4545455444433
No 9
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.7e-40 Score=335.33 Aligned_cols=376 Identities=13% Similarity=0.111 Sum_probs=247.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccccC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENFDM 89 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~ 89 (488)
|||+|++.++.||++|+++||++|++|||+|+|++++...+.+... +++++.++....+ .+ .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~-~~----~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARA-PI----QRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHH-Hh----hcccc
Confidence 7999999999999999999999999999999999998654433322 7888888643211 11 10000
Q ss_pred CCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcC-CCcc--hHHHHHhcCCCcEEEecchHHHHHHHhhhccccc
Q 011339 90 LHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDT-CYPW--TVDTAARFNIPRISFHGFSCFCLLCLYNLHTSTV 166 (488)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~-~~~~--~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 166 (488)
.....+..+.. ......+..+.+. ..+||+||+|. +.++ +..+|+.+|||++.+++.+.+... .+.+
T Consensus 67 -~~~~~~~~~~~--~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~--~~~p---- 136 (415)
T 1iir_A 67 -LTAEDVRRFTT--EAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS--PYYP---- 136 (415)
T ss_dssp -CCHHHHHHHHH--HHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSSC----
T ss_pred -cchHHHHHHHH--HHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC--cccC----
Confidence 01011111111 1122333444431 26999999998 5667 899999999999998776533200 0000
Q ss_pred ccccCCCCCccccC-CCCCccccccc-----cch----HHHHHHHHHhhc------------cccceEEEcCchhhhHHH
Q 011339 167 QENVTSNSDYLVVP-GLPDQIEMTKV-----REK----WKDFGEMVLAAD------------MKSYGIIINTFEELELEY 224 (488)
Q Consensus 167 ~~~~~~~~~~~~~p-~l~~~~~~~~~-----~~~----~~~~~~~~~~~~------------~~~~~~l~~s~~~le~~~ 224 (488)
....+ .++......+. ... +........... ... .++.++++.+++.
T Consensus 137 ---------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~- 205 (415)
T 1iir_A 137 ---------PPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL- 205 (415)
T ss_dssp ---------CCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC-
T ss_pred ---------CccCCccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC-
Confidence 00000 01110000000 000 011111111111 112 4678888777631
Q ss_pred HHHHHhhcCCceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcC
Q 011339 225 VKECKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS 304 (488)
Q Consensus 225 ~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~ 304 (488)
.+..+ ++++|||+..... +..+.++.+|++.. +++|||++||.. ...+.+..++++++..
T Consensus 206 ---~~~~~--~~~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~ 265 (415)
T 1iir_A 206 ---QPTDL--DAVQTGAWILPDE------------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAH 265 (415)
T ss_dssp ---CCCSS--CCEECCCCCCCCC------------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHT
T ss_pred ---CcccC--CeEeeCCCccCcc------------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHC
Confidence 01122 7899999865422 12467889999764 368999999997 5667778899999999
Q ss_pred CCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCc
Q 011339 305 KKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPL 384 (488)
Q Consensus 305 ~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~ 384 (488)
+.+++|+++... .. ... + ++|+++.+|+||.++|+.+++ ||||||+||++|++++|||+|++|.
T Consensus 266 ~~~~v~~~g~~~-~~--~~~--~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~ 329 (415)
T 1iir_A 266 GRRVILSRGWAD-LV--LPD--D---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQ 329 (415)
T ss_dssp TCCEEECTTCTT-CC--CSS--C---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred CCeEEEEeCCCc-cc--ccC--C---------CCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCC
Confidence 999999887653 11 011 2 248999999999999988888 9999999999999999999999999
Q ss_pred ccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCC
Q 011339 385 YGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETR 464 (488)
Q Consensus 385 ~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg 464 (488)
..||..||+++ ++.|+|+.++.+ .+++++|.++|.++ +|+ +|+++++++++.++. .+
T Consensus 330 ~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~~----~~ 386 (415)
T 1iir_A 330 MADQPYYAGRV-AELGVGVAHDGP-------------IPTFDSLSAALATA-LTP----ETHARATAVAGTIRT----DG 386 (415)
T ss_dssp STTHHHHHHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSCS----CH
T ss_pred CCccHHHHHHH-HHCCCcccCCcC-------------CCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHhh----cC
Confidence 99999999999 699999999865 48999999999999 887 999999999888642 22
Q ss_pred chHHHHHHHHHHHHcC
Q 011339 465 SSSLMIKLLIQDIMQQ 480 (488)
Q Consensus 465 ~~~~~~~~~i~~~~~~ 480 (488)
....+.+.|+.+.++
T Consensus 387 -~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 387 -AAVAARLLLDAVSRE 401 (415)
T ss_dssp -HHHHHHHHHHHHHTC
T ss_pred -hHHHHHHHHHHHHhc
Confidence 234455666666554
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.9e-39 Score=326.02 Aligned_cols=385 Identities=17% Similarity=0.160 Sum_probs=257.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccc
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENF 87 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~ 87 (488)
.|+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... ++.++.++.+.... ......
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~---~~~~~~ 70 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTF---HVPEVV 70 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTS---SSSSSS
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccc---cccccc
Confidence 577999999999999999999999999999999999997555544332 78888876321110 000000
Q ss_pred cCCCchhhHHH-HHHHHHHhhHHHHHHHHhcCCCCeEEEEc-CCCcchHHHHHhcCCCcEEEecchHHHHHHHhhhcccc
Q 011339 88 DMLHSTDLVSN-FFKSLRLLQLPLENLLKELTPKPSCIVSD-TCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTST 165 (488)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~pD~vv~D-~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 165 (488)
........+.. +..........+.+++++ ++||+||+| .+.+++..+|+.+|||++.+.+....... + .....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~--~-~~~~~ 145 (402)
T 3ia7_A 71 KQEDAETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH--Y-SLFKE 145 (402)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT--B-CHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc--c-ccccc
Confidence 00111122222 333344556778888888 899999999 67778999999999999987643221000 0 00000
Q ss_pred cccccCCCCCccccCCCCCccccccccchHHHHHHHH------Hhhcccc-ceEEEcCchhhhHHHHHHHHhhcCCceEE
Q 011339 166 VQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMV------LAADMKS-YGIIINTFEELELEYVKECKKTKGGKVWC 238 (488)
Q Consensus 166 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~l~~s~~~le~~~~~~~~~~~~~~~~~ 238 (488)
.........|. .+.+....+.....++ ....... +..+......++ .....++.++.+
T Consensus 146 --------~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~ 210 (402)
T 3ia7_A 146 --------LWKSNGQRHPA--DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ-----PFAETFDERFAF 210 (402)
T ss_dssp --------HHHHHTCCCGG--GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS-----TTGGGCCTTEEE
T ss_pred --------ccccccccChh--hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC-----CccccCCCCeEE
Confidence 00000000000 0000000011111100 0001111 344444434433 233456778999
Q ss_pred eCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCC
Q 011339 239 LGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNT 318 (488)
Q Consensus 239 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~ 318 (488)
+||+.... .+...|....+++++||+++||......+.+..++++++..+.+++|.++.+. .
T Consensus 211 vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~ 272 (402)
T 3ia7_A 211 VGPTLTGR-----------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFL-D 272 (402)
T ss_dssp CCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTS-C
T ss_pred eCCCCCCc-----------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcC-C
Confidence 99975431 12334655555778999999999887777888999999988888888887654 2
Q ss_pred chhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCc-ccccchhHHHHHH
Q 011339 319 SKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPL-YGDQFWNEKLIVQ 397 (488)
Q Consensus 319 ~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~-~~DQ~~na~rv~e 397 (488)
...+.+ .+.|+++.+|+|+.++|+++++ +|||||+||+.|++++|+|+|++|. ..||+.||.++ +
T Consensus 273 ~~~~~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~-~ 338 (402)
T 3ia7_A 273 PAVLGP-----------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERV-I 338 (402)
T ss_dssp GGGGCS-----------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHH-H
T ss_pred hhhhCC-----------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHH-H
Confidence 222222 1469999999999999999998 9999999999999999999999999 99999999999 5
Q ss_pred HhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 011339 398 VLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQDI 477 (488)
Q Consensus 398 ~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~ 477 (488)
+.|+|..+..+ .++++.|.++|.++|+|+ +++++++++++.+.+ +++...+++.+.+.+
T Consensus 339 ~~g~g~~~~~~-------------~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 339 ELGLGSVLRPD-------------QLEPASIREAVERLAADS----AVRERVRRMQRDILS----SGGPARAADEVEAYL 397 (402)
T ss_dssp HTTSEEECCGG-------------GCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT----SCHHHHHHHHHHHHH
T ss_pred HcCCEEEccCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHhh----CChHHHHHHHHHHHH
Confidence 99999999876 589999999999999998 999999998888653 455555554444433
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.9e-40 Score=334.28 Aligned_cols=380 Identities=13% Similarity=0.047 Sum_probs=250.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccccC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENFDM 89 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~ 89 (488)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+... +++++.++..... .+.. . ..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~-~~~~-~--~~- 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHM-MLQE-G--MP- 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGG-CCCT-T--SC-
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHH-HHhh-c--cc-
Confidence 7999999999999999999999999999999999998655444433 7888888643211 1111 0 00
Q ss_pred CCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCC-Ccc--hHHHHHhcCCCcEEEecchHHHHHHHhhhccccc
Q 011339 90 LHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTC-YPW--TVDTAARFNIPRISFHGFSCFCLLCLYNLHTSTV 166 (488)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~-~~~--~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 166 (488)
......+..++. .....+.+.++....+||+||+|.+ .++ +..+|+.+|||++.+++.+.+... .+.+
T Consensus 67 ~~~~~~~~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--~~~p---- 137 (416)
T 1rrv_A 67 PPPPEEEQRLAA---MTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--PHLP---- 137 (416)
T ss_dssp CCCHHHHHHHHH---HHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSSC----
T ss_pred cchhHHHHHHHH---HHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC--cccC----
Confidence 011111111111 1112222222211269999999973 456 888999999999998766532200 0000
Q ss_pred ccccCCCCCcccc-CC-CCCcccccccc----chHHHHHHHHHh------------hccccceEEEcCchhhhHHHHHHH
Q 011339 167 QENVTSNSDYLVV-PG-LPDQIEMTKVR----EKWKDFGEMVLA------------ADMKSYGIIINTFEELELEYVKEC 228 (488)
Q Consensus 167 ~~~~~~~~~~~~~-p~-l~~~~~~~~~~----~~~~~~~~~~~~------------~~~~~~~~l~~s~~~le~~~~~~~ 228 (488)
. ...... ++ +.......... ..+.....++.. ..... .+++++.+.++++
T Consensus 138 -~-----~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~----- 205 (416)
T 1rrv_A 138 -P-----AYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL----- 205 (416)
T ss_dssp -C-----CBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-----
T ss_pred -C-----CCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-----
Confidence 0 000000 11 00000000000 000011111111 11122 5788888877732
Q ss_pred HhhcCCceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccC-CChHHHHHHHHHHhcCCCC
Q 011339 229 KKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICN-LTSSQMIELGLGLEASKKP 307 (488)
Q Consensus 229 ~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~ 307 (488)
+.. .++++|||+..+.. +..+.++.+|++.. +++|||++||... ...+.+..++++++..+.+
T Consensus 206 ~~~--~~~~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~ 269 (416)
T 1rrv_A 206 QPD--VDAVQTGAWLLSDE------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRR 269 (416)
T ss_dssp CSS--CCCEECCCCCCCCC------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCC--CCeeeECCCccCcc------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCe
Confidence 111 27899999865421 12467888998764 3689999999975 3456677899999999999
Q ss_pred eEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccc
Q 011339 308 FIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGD 387 (488)
Q Consensus 308 ~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~D 387 (488)
++|+++... .. ... + ++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...|
T Consensus 270 ~v~~~g~~~-~~--~~~--~---------~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~d 333 (416)
T 1rrv_A 270 VILSRGWTE-LV--LPD--D---------RDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTD 333 (416)
T ss_dssp EEEECTTTT-CC--CSC--C---------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBT
T ss_pred EEEEeCCcc-cc--ccC--C---------CCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCC
Confidence 999987654 10 011 2 358999999999999988888 9999999999999999999999999999
Q ss_pred cchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchH
Q 011339 388 QFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSS 467 (488)
Q Consensus 388 Q~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~ 467 (488)
|+.||+++ ++.|+|+.++.+ ..++++|.++|.++ +|+ +|+++++++++.++. .++.
T Consensus 334 Q~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~~----~~~~- 389 (416)
T 1rrv_A 334 QPYFAGRV-AALGIGVAHDGP-------------TPTFESLSAALTTV-LAP----ETRARAEAVAGMVLT----DGAA- 389 (416)
T ss_dssp HHHHHHHH-HHHTSEEECSSS-------------CCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCCC----CHHH-
T ss_pred cHHHHHHH-HHCCCccCCCCC-------------CCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHhh----cCcH-
Confidence 99999999 599999999765 48999999999999 887 999999998888652 3344
Q ss_pred HHHHHHH-HHHHcCC
Q 011339 468 LMIKLLI-QDIMQQP 481 (488)
Q Consensus 468 ~~~~~~i-~~~~~~~ 481 (488)
.+ .+.| +.+.++.
T Consensus 390 ~~-~~~i~e~~~~~~ 403 (416)
T 1rrv_A 390 AA-ADLVLAAVGREK 403 (416)
T ss_dssp HH-HHHHHHHHHC--
T ss_pred HH-HHHHHHHHhccC
Confidence 44 4444 7665543
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=8.6e-40 Score=330.31 Aligned_cols=348 Identities=13% Similarity=0.055 Sum_probs=241.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccccC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENFDM 89 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~ 89 (488)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+... ++.++.++.+... + .....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~--~-~~~~~--- 65 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRA--G-AREPG--- 65 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSG--G-GSCTT---
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHH--H-hcccc---
Confidence 7899999999999999999999999999999999998655544433 7888888633221 0 00000
Q ss_pred CCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCcch---HHHHHhcCCCcEEEecchHHHHHHHhhhccccc
Q 011339 90 LHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYPWT---VDTAARFNIPRISFHGFSCFCLLCLYNLHTSTV 166 (488)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~---~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 166 (488)
.........+..........+.+++ .+||+||+|.....+ ..+|+.+|||++.+...+....+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~--------- 132 (404)
T 3h4t_A 66 ELPPGAAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE--------- 132 (404)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG---------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh---------
Confidence 0001111223333333444444444 379999999765533 789999999999887665421000
Q ss_pred ccccCCCCCccccCCCCCcccccccc----chHHHHHHHHHhhc--c---------ccceEEEcCchhhhHHHHHHHHhh
Q 011339 167 QENVTSNSDYLVVPGLPDQIEMTKVR----EKWKDFGEMVLAAD--M---------KSYGIIINTFEELELEYVKECKKT 231 (488)
Q Consensus 167 ~~~~~~~~~~~~~p~l~~~~~~~~~~----~~~~~~~~~~~~~~--~---------~~~~~l~~s~~~le~~~~~~~~~~ 231 (488)
... ..+.... ..+....++..... . ..+..+.+..+.+.+. ++
T Consensus 133 --------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~------~~ 190 (404)
T 3h4t_A 133 --------------QSQ--AERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL------RP 190 (404)
T ss_dssp --------------SCH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC------CT
T ss_pred --------------hHH--HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC------CC
Confidence 000 0000000 00111111111000 0 0112344554444422 34
Q ss_pred cCCceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEE
Q 011339 232 KGGKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWV 311 (488)
Q Consensus 232 ~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~ 311 (488)
+++++.++|++..+.. +..++++.+|++. ++++|||++||+.. ..+.+..++++++..+.++||+
T Consensus 191 ~~~~~~~~G~~~~~~~------------~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~ 255 (404)
T 3h4t_A 191 TDLGTVQTGAWILPDQ------------RPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLS 255 (404)
T ss_dssp TCCSCCBCCCCCCCCC------------CCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCeEEeCccccCCC------------CCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEE
Confidence 5678899998765432 1256788889875 45689999999987 6778889999999999999999
Q ss_pred EeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchh
Q 011339 312 IRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWN 391 (488)
Q Consensus 312 ~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~n 391 (488)
.+..... . +. .++|+++.+|+||.++|+++++ ||||||+||+.|++++|||+|++|+.+||+.|
T Consensus 256 ~g~~~~~--~-----~~-------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~n 319 (404)
T 3h4t_A 256 SGWAGLG--R-----ID-------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYY 319 (404)
T ss_dssp CTTTTCC--C-----SS-------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred eCCcccc--c-----cc-------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHH
Confidence 8765411 0 10 1469999999999999999888 99999999999999999999999999999999
Q ss_pred HHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHH
Q 011339 392 EKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAK 457 (488)
Q Consensus 392 a~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~ 457 (488)
|+++ ++.|+|..++.. .++++.|.++|.++++ + +|+++++++++.++
T Consensus 320 a~~~-~~~G~g~~l~~~-------------~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 320 AGRV-ADLGVGVAHDGP-------------TPTVESLSAALATALT-P----GIRARAAAVAGTIR 366 (404)
T ss_dssp HHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC
T ss_pred HHHH-HHCCCEeccCcC-------------CCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh
Confidence 9999 599999999876 5899999999999998 7 99999999988854
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.4e-38 Score=324.25 Aligned_cols=374 Identities=17% Similarity=0.186 Sum_probs=246.2
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCC
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGV 80 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 80 (488)
|..+| +||||+|++.++.||++|++.||++|+++||+|++++++...+.+.+ .+++++.++.. .
T Consensus 1 M~~~m--~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~-----~ 64 (430)
T 2iyf_A 1 MTTQT--TPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHST-----L 64 (430)
T ss_dssp ---------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCC-----S
T ss_pred CCCcc--ccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCc-----C
Confidence 77777 78999999999999999999999999999999999999865443332 27888876521 1
Q ss_pred CCCCcccc--CCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHHHHHH
Q 011339 81 PEGCENFD--MLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFCLLCL 158 (488)
Q Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~ 158 (488)
+.+..... .......+..+..........+.+++++ .+||+||+|.+.+++..+|+.+|||++.+++........
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~- 141 (430)
T 2iyf_A 65 PGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY- 141 (430)
T ss_dssp CCTTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-
Confidence 11111000 0010122222233334456778888888 899999999877788999999999999987553200000
Q ss_pred hhhcccccccccCCCCCccccCCCCCccccccccchHHHHHHHH------HhhccccceEEEcCchhhhHHHHHHHHhhc
Q 011339 159 YNLHTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMV------LAADMKSYGIIINTFEELELEYVKECKKTK 232 (488)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~s~~~le~~~~~~~~~~~ 232 (488)
.......... .....+. +.+....+..++.+. .......+.+++++...+++. ...+
T Consensus 142 ~~~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~ 204 (430)
T 2iyf_A 142 EEEVAEPMWR---------EPRQTER---GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-----ADRV 204 (430)
T ss_dssp HHHTHHHHHH---------HHHHSHH---HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----GGGS
T ss_pred ccccccchhh---------hhccchH---HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----cccC
Confidence 0000000000 0000000 000000011111110 001113567888888777632 2346
Q ss_pred CCc-eEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcC-CCCeEE
Q 011339 233 GGK-VWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS-KKPFIW 310 (488)
Q Consensus 233 ~~~-~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~v~ 310 (488)
+++ +++|||.+.... +..+|.+..+++++||+++||......+.+..++++++.. +.+++|
T Consensus 205 ~~~~v~~vG~~~~~~~-----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~ 267 (430)
T 2iyf_A 205 DEDVYTFVGACQGDRA-----------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVL 267 (430)
T ss_dssp CTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCccEEEeCCcCCCCC-----------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEE
Confidence 677 999998643211 1234655455678999999999855567788889999885 778888
Q ss_pred EEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccch
Q 011339 311 VIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFW 390 (488)
Q Consensus 311 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~ 390 (488)
.++.+. ....+.+ .+.|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|..+||..
T Consensus 268 ~~G~~~-~~~~l~~-----------~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~ 333 (430)
T 2iyf_A 268 QIGRKV-TPAELGE-----------LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFG 333 (430)
T ss_dssp ECC----CGGGGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHH
T ss_pred EeCCCC-ChHHhcc-----------CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHH
Confidence 887654 2222111 1468999999999999999998 9999999999999999999999999999999
Q ss_pred hHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHH
Q 011339 391 NEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRA 459 (488)
Q Consensus 391 na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~ 459 (488)
|+.++ ++.|+|..++.. .+++++|.++|.++++|+ ++++++.++++.+.+.
T Consensus 334 ~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 334 NADML-QGLGVARKLATE-------------EATADLLRETALALVDDP----EVARRLRRIQAEMAQE 384 (430)
T ss_dssp HHHHH-HHTTSEEECCCC--------------CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHcCCEEEcCCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhc
Confidence 99999 599999998765 489999999999999987 8888888888876643
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.9e-38 Score=321.27 Aligned_cols=380 Identities=13% Similarity=0.079 Sum_probs=239.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC--c
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGC--E 85 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~--~ 85 (488)
+||||+|++.++.||++|+++||++|+++||+|+|++++...+.+.. .|++++.++......++.... .
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~---------~G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA---------AGLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TTCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh---------CCCceeecCCccchHHHhhhhhcc
Confidence 78999999999999999999999999999999999999865443332 278888886321000000000 0
Q ss_pred c------cc-----CC-CchhhHHHHHHHH----H-----H-hhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCC
Q 011339 86 N------FD-----ML-HSTDLVSNFFKSL----R-----L-LQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIP 143 (488)
Q Consensus 86 ~------~~-----~~-~~~~~~~~~~~~~----~-----~-~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP 143 (488)
. .. .. .....+....... . . ....+.+++++ ++||+||+|.+++++..+|+.+|||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgiP 167 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGTP 167 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTCC
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCCC
Confidence 0 00 00 0011111111111 1 1 44566677777 7999999999878899999999999
Q ss_pred cEEEecchHHHHHHHhhhcccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccc---------cceEEE
Q 011339 144 RISFHGFSCFCLLCLYNLHTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMK---------SYGIII 214 (488)
Q Consensus 144 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~ 214 (488)
++.+...+.........+... ....|... . . ..+...+.+....... .+..+.
T Consensus 168 ~v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~--~-~----~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 229 (441)
T 2yjn_A 168 HARLLWGPDITTRARQNFLGL-----------LPDQPEEH--R-E----DPLAEWLTWTLEKYGGPAFDEEVVVGQWTID 229 (441)
T ss_dssp EEEECSSCCHHHHHHHHHHHH-----------GGGSCTTT--C-C----CHHHHHHHHHHHHTTCCCCCGGGTSCSSEEE
T ss_pred EEEEecCCCcchhhhhhhhhh-----------cccccccc--c-c----chHHHHHHHHHHHcCCCCCCccccCCCeEEE
Confidence 999865443221111000000 00011000 0 0 0111222222211100 122333
Q ss_pred cCchhhhHHHHHHHHhhcCCceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCC---Ch
Q 011339 215 NTFEELELEYVKECKKTKGGKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNL---TS 291 (488)
Q Consensus 215 ~s~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~---~~ 291 (488)
...+.+++ ...++ . ..+++.. +..+.++.+|++..+++++|||++||.... ..
T Consensus 230 ~~~~~~~~------~~~~~-~-~~~~~~~----------------~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~ 285 (441)
T 2yjn_A 230 PAPAAIRL------DTGLK-T-VGMRYVD----------------YNGPSVVPEWLHDEPERRRVCLTLGISSRENSIGQ 285 (441)
T ss_dssp CSCGGGSC------CCCCC-E-EECCCCC----------------CCSSCCCCGGGSSCCSSCEEEEEC----------C
T ss_pred ecCccccC------CCCCC-C-CceeeeC----------------CCCCcccchHhhcCCCCCEEEEECCCCcccccChH
Confidence 33222221 01111 0 1122110 002345678988766778999999999864 34
Q ss_pred HHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHH
Q 011339 292 SQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLE 371 (488)
Q Consensus 292 ~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~e 371 (488)
+.+..++++++..+.++||+.++.. ...+.. + ++|+++.+|+||.++|+.+++ ||||||+||++|
T Consensus 286 ~~~~~~~~al~~~~~~~v~~~g~~~--~~~l~~--~---------~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~E 350 (441)
T 2yjn_A 286 VSIEELLGAVGDVDAEIIATFDAQQ--LEGVAN--I---------PDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHT 350 (441)
T ss_dssp CSTTTTHHHHHTSSSEEEECCCTTT--TSSCSS--C---------CSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEECCcc--hhhhcc--C---------CCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHH
Confidence 5667788899888899999887543 111111 1 469999999999999999988 999999999999
Q ss_pred HhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHH
Q 011339 372 GISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRARE 451 (488)
Q Consensus 372 al~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~ 451 (488)
++++|||+|++|...||+.||+++ ++.|+|+.++.. .++++.|.++|.++|+|+ ++++++++
T Consensus 351 a~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~ 412 (441)
T 2yjn_A 351 AAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVP-------------ELTPDQLRESVKRVLDDP----AHRAGAAR 412 (441)
T ss_dssp HHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTT-------------TCCHHHHHHHHHHHHHCH----HHHHHHHH
T ss_pred HHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccc-------------cCCHHHHHHHHHHHhcCH----HHHHHHHH
Confidence 999999999999999999999999 599999999865 589999999999999998 99999999
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHH
Q 011339 452 FQIMAKRATEETRSSSLMIKLLIQDIM 478 (488)
Q Consensus 452 l~~~~~~~~~~gg~~~~~~~~~i~~~~ 478 (488)
+++.+.. .++... +.+.|+.+.
T Consensus 413 ~~~~~~~----~~~~~~-~~~~i~~~~ 434 (441)
T 2yjn_A 413 MRDDMLA----EPSPAE-VVGICEELA 434 (441)
T ss_dssp HHHHHHT----SCCHHH-HHHHHHHHH
T ss_pred HHHHHHc----CCCHHH-HHHHHHHHH
Confidence 9988653 344444 444445443
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.3e-37 Score=310.50 Aligned_cols=364 Identities=12% Similarity=0.038 Sum_probs=245.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCcccc---CCCCCCcc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEA---GVPEGCEN 86 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~l~~~~~~ 86 (488)
|||++++.++.||++|+++||++|+++||+|+|++++...+.+... ++.++.++...... ....+...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 7899999999999999999999999999999999988544433322 68888775321000 00000000
Q ss_pred ccCCCchhhH----HH-HHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHHHHHHhhh
Q 011339 87 FDMLHSTDLV----SN-FFKSLRLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFCLLCLYNL 161 (488)
Q Consensus 87 ~~~~~~~~~~----~~-~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 161 (488)
.. ....... .. +..........+.+++++ .+||+||+|.+.+++..+|+.+|||++.+...+..
T Consensus 72 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------- 140 (384)
T 2p6p_A 72 AI-PSDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------- 140 (384)
T ss_dssp CC-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------
T ss_pred cc-CcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------
Confidence 00 0110111 11 112223345667777887 79999999988778889999999999987532110
Q ss_pred cccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHh-hccccceEEEcCchhhhHHHHHHHHhhcC-CceEEe
Q 011339 162 HTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLA-ADMKSYGIIINTFEELELEYVKECKKTKG-GKVWCL 239 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~s~~~le~~~~~~~~~~~~-~~~~~v 239 (488)
...+.. +....+.++..++.. .....+.++.++.+.++++ ..++ .++.++
T Consensus 141 -----------------~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~ 192 (384)
T 2p6p_A 141 -----------------ADGIHP-----GADAELRPELSELGLERLPAPDLFIDICPPSLRPA------NAAPARMMRHV 192 (384)
T ss_dssp -----------------CTTTHH-----HHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------TSCCCEECCCC
T ss_pred -----------------cchhhH-----HHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------CCCCCCceEec
Confidence 000000 000011111111100 0011456778887766532 1122 234444
Q ss_pred CCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCC-----ChHHHHHHHHHHhcCCCCeEEEEeC
Q 011339 240 GPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNL-----TSSQMIELGLGLEASKKPFIWVIRG 314 (488)
Q Consensus 240 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~-----~~~~~~~~~~a~~~~~~~~v~~~~~ 314 (488)
+. . .+.++.+|++..+++++|||++||.... +.+.+..++++++..+.+++|+.++
T Consensus 193 ~~---~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 253 (384)
T 2p6p_A 193 AT---S----------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPD 253 (384)
T ss_dssp CC---C----------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCH
T ss_pred CC---C----------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 21 1 1234557776655667999999999875 4577888999999888999998764
Q ss_pred CCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhHHH
Q 011339 315 GNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNEKL 394 (488)
Q Consensus 315 ~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na~r 394 (488)
.. . +.+.. .+.|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||.+
T Consensus 254 ~~----------~-~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~ 317 (384)
T 2p6p_A 254 TV----------A-EALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARR 317 (384)
T ss_dssp HH----------H-HHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHH
T ss_pred CC----------H-HhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHH
Confidence 22 1 11111 2569999 99999999999888 99999999999999999999999999999999999
Q ss_pred HHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 011339 395 IVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLI 474 (488)
Q Consensus 395 v~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i 474 (488)
+ ++.|+|+.++.. ..++++|.++|.++|+|+ +++++++++++.++. .++...+++.+.
T Consensus 318 ~-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 375 (384)
T 2p6p_A 318 V-ADYGAAIALLPG-------------EDSTEAIADSCQELQAKD----TYARRAQDLSREISG----MPLPATVVTALE 375 (384)
T ss_dssp H-HHHTSEEECCTT-------------CCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT----SCCHHHHHHHHH
T ss_pred H-HHCCCeEecCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh----CCCHHHHHHHHH
Confidence 9 599999998765 489999999999999988 999999999998764 344445554444
Q ss_pred HHHH
Q 011339 475 QDIM 478 (488)
Q Consensus 475 ~~~~ 478 (488)
+.+-
T Consensus 376 ~~~~ 379 (384)
T 2p6p_A 376 QLAH 379 (384)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 4433
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.7e-35 Score=298.28 Aligned_cols=349 Identities=15% Similarity=0.120 Sum_probs=220.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCC----CCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGV----PEG 83 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l----~~~ 83 (488)
.+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.++.++.+.....+ ..+
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREG 84 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTS
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccC
Confidence 679999999999999999999999999999999999987555444332 7888887632110000 000
Q ss_pred CccccCCCchh----hHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHHHHHHh
Q 011339 84 CENFDMLHSTD----LVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFCLLCLY 159 (488)
Q Consensus 84 ~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~ 159 (488)
........... ....+..........+.+++++ ++||+|++|...+++..+|+.+|||++.+...........
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~- 161 (398)
T 4fzr_A 85 NRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK- 161 (398)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH-
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh-
Confidence 00000000001 1112222334556678888888 8999999998888899999999999998754321100000
Q ss_pred hhcccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhh-----ccccceEEEcCchhhhHHHHHHHHhhcCC
Q 011339 160 NLHTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAA-----DMKSYGIIINTFEELELEYVKECKKTKGG 234 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~s~~~le~~~~~~~~~~~~~ 234 (488)
. .....+.+.... .......+......+... ......
T Consensus 162 ------------------------~---------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 203 (398)
T 4fzr_A 162 ------------------------S---------AGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ-----PKPGTT 203 (398)
T ss_dssp ------------------------H---------HHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC---------CCCE
T ss_pred ------------------------H---------HHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC-----CCCCCC
Confidence 0 000000011000 011122333333333211 001111
Q ss_pred ceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCC--------ChHHHHHHHHHHhcCCC
Q 011339 235 KVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNL--------TSSQMIELGLGLEASKK 306 (488)
Q Consensus 235 ~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~--------~~~~~~~~~~a~~~~~~ 306 (488)
.+.|+++.. .+.++.+|+...+++++|||++||.... ..+.+..++++++..+.
T Consensus 204 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 265 (398)
T 4fzr_A 204 KMRYVPYNG------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGF 265 (398)
T ss_dssp ECCCCCCCC------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTC
T ss_pred CeeeeCCCC------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCC
Confidence 122332110 1233445665545678999999999763 34668889999998889
Q ss_pred CeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCccc
Q 011339 307 PFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYG 386 (488)
Q Consensus 307 ~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~ 386 (488)
+++|+.++.. .+.+.+ .++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...
T Consensus 266 ~~v~~~~~~~--~~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~ 330 (398)
T 4fzr_A 266 EVVVAVSDKL--AQTLQP-----------LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIA 330 (398)
T ss_dssp EEEECCCC---------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSG
T ss_pred EEEEEeCCcc--hhhhcc-----------CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCch
Confidence 9998877643 111111 2469999999999999999999 999999999999999999999999999
Q ss_pred ccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHH
Q 011339 387 DQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAK 457 (488)
Q Consensus 387 DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~ 457 (488)
||..|+.++ ++.|+|..++.. .++++.|.++|.++|+|+ +++++++++++.+.
T Consensus 331 ~q~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 331 EVWDSARLL-HAAGAGVEVPWE-------------QAGVESVLAACARIRDDS----SYVGNARRLAAEMA 383 (398)
T ss_dssp GGHHHHHHH-HHTTSEEECC--------------------CHHHHHHHHHHCT----HHHHHHHHHHHHHT
T ss_pred hHHHHHHHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 999999999 599999999876 489999999999999999 99999998888864
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.1e-34 Score=292.32 Aligned_cols=348 Identities=16% Similarity=0.173 Sum_probs=232.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCC----C
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPE----G 83 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~----~ 83 (488)
++|||+|++.++.||++|++.||++|+++||+|+++++ ...+.+.. .++.++.++.+.....+.. .
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDYSAVKVFEQVAKD 88 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTCCHHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCccCHHHHhhhcccC
Confidence 78999999999999999999999999999999999998 55444433 2788888762210000000 0
Q ss_pred Cc-------cccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHHHH
Q 011339 84 CE-------NFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFCLL 156 (488)
Q Consensus 84 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~ 156 (488)
.. .............+..........+.+++++ ++||+||+|...+++..+|+.+|||++.+.......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~-- 164 (398)
T 3oti_A 89 NPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD--YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT-- 164 (398)
T ss_dssp CHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC--
T ss_pred CccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc--
Confidence 00 0000001122233333444567788889998 899999999888889999999999999864331100
Q ss_pred HHhhhcccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHhhcCCce
Q 011339 157 CLYNLHTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKKTKGGKV 236 (488)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~ 236 (488)
..... .....+.....++..........+......+.. ........+
T Consensus 165 -----------------------~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 211 (398)
T 3oti_A 165 -----------------------RGMHR-----SIASFLTDLMDKHQVSLPEPVATIESFPPSLLL-----EAEPEGWFM 211 (398)
T ss_dssp -----------------------TTHHH-----HHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGT-----TSCCCSBCC
T ss_pred -----------------------cchhh-----HHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCC-----CCCCCCCCc
Confidence 00000 000011111111111011112222222222220 000000011
Q ss_pred EEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCC--ChHHHHHHHHHHhcCCCCeEEEEeC
Q 011339 237 WCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNL--TSSQMIELGLGLEASKKPFIWVIRG 314 (488)
Q Consensus 237 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~--~~~~~~~~~~a~~~~~~~~v~~~~~ 314 (488)
.|+ |. ..+....+|+...+++++|||++||.... ..+.+..++++++..+.+++|+.++
T Consensus 212 ~~~-~~------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~ 272 (398)
T 3oti_A 212 RWV-PY------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGD 272 (398)
T ss_dssp CCC-CC------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTT
T ss_pred ccc-CC------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECC
Confidence 111 10 02334556776666778999999999663 5677888999999888999998876
Q ss_pred CCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhH--
Q 011339 315 GNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNE-- 392 (488)
Q Consensus 315 ~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na-- 392 (488)
.. .+.+.. + ++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|+
T Consensus 273 ~~--~~~l~~--~---------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~ 337 (398)
T 3oti_A 273 LD--ISPLGT--L---------PRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAR 337 (398)
T ss_dssp SC--CGGGCS--C---------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTH
T ss_pred cC--hhhhcc--C---------CCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHH
Confidence 54 222222 2 469999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHH
Q 011339 393 KLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKR 458 (488)
Q Consensus 393 ~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~ 458 (488)
.++ ++.|+|..++.. ..+++.|. ++|+|+ +++++++++++.+.+
T Consensus 338 ~~~-~~~g~g~~~~~~-------------~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 338 EAV-SRRGIGLVSTSD-------------KVDADLLR----RLIGDE----SLRTAAREVREEMVA 381 (398)
T ss_dssp HHH-HHHTSEEECCGG-------------GCCHHHHH----HHHHCH----HHHHHHHHHHHHHHT
T ss_pred HHH-HHCCCEEeeCCC-------------CCCHHHHH----HHHcCH----HHHHHHHHHHHHHHh
Confidence 999 599999999876 47888777 788888 999999999888653
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5e-34 Score=286.84 Aligned_cols=348 Identities=12% Similarity=0.122 Sum_probs=228.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEe-eCCcccc-C----CCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEI-QFPYQEA-G----VPE 82 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~-~----l~~ 82 (488)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.++.+ +.+.... . .+.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 48999999999999999999999999999999999987544433322 7888777 3211000 0 000
Q ss_pred CCccccCCCchhhHHHHHHHHHHh-------hHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHHH
Q 011339 83 GCENFDMLHSTDLVSNFFKSLRLL-------QLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFCL 155 (488)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~ 155 (488)
................+......+ ...+.+++++ ++||+||+|.+.+++..+|+.+|||++.+........
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 149 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTA 149 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccc
Confidence 000000011111112222222233 6778888888 8999999998777888899999999998743321100
Q ss_pred HHHhhhcccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhc----cccceEEEcCchhhhHHHHHHHHhh
Q 011339 156 LCLYNLHTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAAD----MKSYGIIINTFEELELEYVKECKKT 231 (488)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~s~~~le~~~~~~~~~~ 231 (488)
.. +.. ....++...+.... ...+..+.....+++. ....
T Consensus 150 -------------------~~-----~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 192 (391)
T 3tsa_A 150 -------------------GP-----FSD--------RAHELLDPVCRHHGLTGLPTPELILDPCPPSLQA-----SDAP 192 (391)
T ss_dssp -------------------TH-----HHH--------HHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSC-----TTSC
T ss_pred -------------------cc-----ccc--------hHHHHHHHHHHHcCCCCCCCCceEEEecChhhcC-----CCCC
Confidence 00 000 00111111111111 1113333333333220 0000
Q ss_pred cCCceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccC--CC-hHHHHHHHHHHhcC-CCC
Q 011339 232 KGGKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICN--LT-SSQMIELGLGLEAS-KKP 307 (488)
Q Consensus 232 ~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~--~~-~~~~~~~~~a~~~~-~~~ 307 (488)
....+.|+ |.. .+....+|+...+++++||+++||... .. .+.+..++++ +.. +.+
T Consensus 193 ~~~~~~~~-p~~------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~ 252 (391)
T 3tsa_A 193 QGAPVQYV-PYN------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE 252 (391)
T ss_dssp CCEECCCC-CCC------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE
T ss_pred ccCCeeee-cCC------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE
Confidence 11122233 110 123344677665678899999999954 23 6778888888 777 678
Q ss_pred eEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccc
Q 011339 308 FIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGD 387 (488)
Q Consensus 308 ~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~D 387 (488)
++|..++.. ...+.. .+.|+++.+|+|+.++|+.+++ ||||||.||++||+++|+|+|++|...|
T Consensus 253 ~v~~~~~~~--~~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~ 317 (391)
T 3tsa_A 253 AVIAVPPEH--RALLTD-----------LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFD 317 (391)
T ss_dssp EEEECCGGG--GGGCTT-----------CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred EEEEECCcc--hhhccc-----------CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCccc
Confidence 888876542 111111 1468999999999999988888 9999999999999999999999999999
Q ss_pred cchhHHHHHHHhcceEEecc--cCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHH
Q 011339 388 QFWNEKLIVQVLNIGVRIGV--EVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAK 457 (488)
Q Consensus 388 Q~~na~rv~e~~G~G~~l~~--~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~ 457 (488)
|+.|+.++ ++.|+|..++. . ..+++.|.++|.++|+|+ +++++++++++.+.
T Consensus 318 q~~~a~~~-~~~g~g~~~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 371 (391)
T 3tsa_A 318 QFDYARNL-AAAGAGICLPDEQA-------------QSDHEQFTDSIATVLGDT----GFAAAAIKLSDEIT 371 (391)
T ss_dssp HHHHHHHH-HHTTSEEECCSHHH-------------HTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHcCCEEecCcccc-------------cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH
Confidence 99999999 59999999987 5 489999999999999999 99999988888865
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=1.6e-31 Score=270.30 Aligned_cols=362 Identities=15% Similarity=0.154 Sum_probs=239.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCcc-----------
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQ----------- 76 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------- 76 (488)
.+|||+|++.++.||++|++.||++|+++||+|++++++...+.+... ++.++.++....
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhh
Confidence 679999999999999999999999999999999999998543333222 788887752000
Q ss_pred -ccCCCCCCccccCCCchhhHHHHHHH-HHHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchHHH
Q 011339 77 -EAGVPEGCENFDMLHSTDLVSNFFKS-LRLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSCFC 154 (488)
Q Consensus 77 -~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~~~ 154 (488)
....+. ....... ......+... .......+.+++++ .+||+||+|...+++..+|+.+|||++.+.......
T Consensus 90 ~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 164 (412)
T 3otg_A 90 DTDSPEG-LTPEQLS--ELPQIVFGRVIPQRVFDELQPVIER--LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP 164 (412)
T ss_dssp SCSCCTT-CCHHHHT--TSHHHHHHTHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC
T ss_pred cccCCcc-CChhHhh--HHHHHHHhccchHHHHHHHHHHHHh--cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc
Confidence 000000 0000000 0111122221 23345778888888 899999999877788889999999998863321100
Q ss_pred HHHHhhhcccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhh----------ccccceEEEcCchhhhHHH
Q 011339 155 LLCLYNLHTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAA----------DMKSYGIIINTFEELELEY 224 (488)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~s~~~le~~~ 224 (488)
++.. +.+.....+.... ....+.++..+-..++.
T Consensus 165 -------------------------~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~-- 208 (412)
T 3otg_A 165 -------------------------DDLT---------RSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQE-- 208 (412)
T ss_dssp -------------------------SHHH---------HHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSC--
T ss_pred -------------------------hhhh---------HHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcC--
Confidence 0000 0011111111110 12233444444333331
Q ss_pred HHHHHhhcCCc---eEEeCCCCCCCCCcchhhhhCCCCcccchhhhcc-cCCCCCCeEEEEeeCCccCCChHHHHHHHHH
Q 011339 225 VKECKKTKGGK---VWCLGPVSLCNKQDIDKAERGKKAAVDISECLNW-LDSWPPNSVVYVCLGSICNLTSSQMIELGLG 300 (488)
Q Consensus 225 ~~~~~~~~~~~---~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a 300 (488)
+...+... +.++++- ...+..+| ....+++++||+++||......+.+..++++
T Consensus 209 ---~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 266 (412)
T 3otg_A 209 ---PEFRARPRRHELRPVPFA-------------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDG 266 (412)
T ss_dssp ---HHHHTCTTEEECCCCCCC-------------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHH
T ss_pred ---CcccCCCCcceeeccCCC-------------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHH
Confidence 11111111 1222211 11233455 2223467799999999986667788889999
Q ss_pred HhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEe
Q 011339 301 LEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLI 380 (488)
Q Consensus 301 ~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v 380 (488)
++..+.+++|..++.. ....+.+ + ++|+.+.+|+|+.++|+++++ ||+|||.||++||+++|+|+|
T Consensus 267 l~~~~~~~~~~~g~~~-~~~~l~~--~---------~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v 332 (412)
T 3otg_A 267 LAGLDADVLVASGPSL-DVSGLGE--V---------PANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQL 332 (412)
T ss_dssp HHTSSSEEEEECCSSC-CCTTCCC--C---------CTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEE
T ss_pred HHcCCCEEEEEECCCC-Chhhhcc--C---------CCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEE
Confidence 9888889999887654 2222222 2 468999999999999999999 999999999999999999999
Q ss_pred ecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHH
Q 011339 381 TWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRAT 460 (488)
Q Consensus 381 ~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~ 460 (488)
++|...||..|+.++ ++.|.|..++.. ..++++|.++|.++|+|+ ++++++.+.++.+.+
T Consensus 333 ~~p~~~~q~~~~~~v-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~-- 392 (412)
T 3otg_A 333 SFPWAGDSFANAQAV-AQAGAGDHLLPD-------------NISPDSVSGAAKRLLAEE----SYRAGARAVAAEIAA-- 392 (412)
T ss_dssp ECCCSTTHHHHHHHH-HHHTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHH--
T ss_pred ecCCchhHHHHHHHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHhc--
Confidence 999999999999999 599999999876 489999999999999998 888888887777553
Q ss_pred hcCCchHHHHHHHHHHHH
Q 011339 461 EETRSSSLMIKLLIQDIM 478 (488)
Q Consensus 461 ~~gg~~~~~~~~~i~~~~ 478 (488)
..+....+ +.++++.
T Consensus 393 --~~~~~~~~-~~~~~l~ 407 (412)
T 3otg_A 393 --MPGPDEVV-RLLPGFA 407 (412)
T ss_dssp --SCCHHHHH-TTHHHHH
T ss_pred --CCCHHHHH-HHHHHHh
Confidence 34444444 4444443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2.8e-30 Score=256.70 Aligned_cols=325 Identities=14% Similarity=0.125 Sum_probs=200.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccccC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENFDM 89 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~ 89 (488)
.||+|.+.|+.||++|.++||++|.++||+|+|++++...+. +.+.. .++.++.++.. +++.. ..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~--~~v~~-----~g~~~~~i~~~----~~~~~-~~--- 67 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIEN--DLVPK-----AGLPLHLIQVS----GLRGK-GL--- 67 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHH--HHTGG-----GTCCEEECC-----------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhh--chhhh-----cCCcEEEEECC----CcCCC-CH---
Confidence 479999999999999999999999999999999988643221 11222 26777776521 22111 00
Q ss_pred CCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhcCCCcEEEecchHHHHHHHhhhcccccc
Q 011339 90 LHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYP--WTVDTAARFNIPRISFHGFSCFCLLCLYNLHTSTVQ 167 (488)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 167 (488)
.........+... ......++++ .+||+||++..+. .+..+|+.+|||++..
T Consensus 68 ~~~~~~~~~~~~~----~~~~~~~l~~--~~PDvVi~~g~~~s~p~~laA~~~~iP~vih-------------------- 121 (365)
T 3s2u_A 68 KSLVKAPLELLKS----LFQALRVIRQ--LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH-------------------- 121 (365)
T ss_dssp -----CHHHHHHH----HHHHHHHHHH--HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE--------------------
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHh--cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE--------------------
Confidence 0011111122221 2234567777 7999999997654 4567899999999862
Q ss_pred cccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHhhcCCceEEeCCCCCCCC
Q 011339 168 ENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKKTKGGKVWCLGPVSLCNK 247 (488)
Q Consensus 168 ~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~ 247 (488)
+.+..||+.. + +. .+.++. +..++++.. ....+..++|+......
T Consensus 122 -------e~n~~~G~~n------------r----~l--~~~a~~-v~~~~~~~~---------~~~~k~~~~g~pvr~~~ 166 (365)
T 3s2u_A 122 -------EQNAVAGTAN------------R----SL--APIARR-VCEAFPDTF---------PASDKRLTTGNPVRGEL 166 (365)
T ss_dssp -------ECSSSCCHHH------------H----HH--GGGCSE-EEESSTTSS---------CC---CEECCCCCCGGG
T ss_pred -------ecchhhhhHH------------H----hh--ccccce-eeecccccc---------cCcCcEEEECCCCchhh
Confidence 2334444322 1 11 111222 333333211 11256677885432211
Q ss_pred CcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcC----CCCeEEEEeCCCCCchhhh
Q 011339 248 QDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS----KKPFIWVIRGGNNTSKEIQ 323 (488)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~----~~~~v~~~~~~~~~~~~~~ 323 (488)
. .+-..+....+++++|+|..||..... ....+.++++.. +..++|..+... ...
T Consensus 167 ~---------------~~~~~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~~-- 225 (365)
T 3s2u_A 167 F---------------LDAHARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH--AEI-- 225 (365)
T ss_dssp C---------------CCTTSSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT--HHH--
T ss_pred c---------------cchhhhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc--ccc--
Confidence 0 011111222235678999999987632 223445555543 345666655443 111
Q ss_pred hhhhhHHHHHHhcCCCeEEecccchh-hhhccCCcccccccCCchhHHHHhhcCCCEeecCcc----cccchhHHHHHHH
Q 011339 324 EWLLEEKFEERVKGRGILILGWAPQV-LILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLY----GDQFWNEKLIVQV 398 (488)
Q Consensus 324 ~~~~p~~~~~~~~~~nv~~~~~~pq~-~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~----~DQ~~na~rv~e~ 398 (488)
+.+.+ .....++.+.+|+++. ++|+.+|+ +|||+|.+|+.|++++|+|+|.+|+. .+|..||+.+ ++
T Consensus 226 ---~~~~~--~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l-~~ 297 (365)
T 3s2u_A 226 ---TAERY--RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL-VR 297 (365)
T ss_dssp ---HHHHH--HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH-HT
T ss_pred ---cccee--cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH-HH
Confidence 11111 1224588889999884 69999999 99999999999999999999999974 4799999999 59
Q ss_pred hcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHH
Q 011339 399 LNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREF 452 (488)
Q Consensus 399 ~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l 452 (488)
.|+|..++.+ .++++.|.++|.++|+|++..+.|.++++++
T Consensus 298 ~G~a~~l~~~-------------~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 298 SGAGRLLPQK-------------STGAAELAAQLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp TTSEEECCTT-------------TCCHHHHHHHHHHHHHCTHHHHHHHHHHHHT
T ss_pred CCCEEEeecC-------------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHhc
Confidence 9999999876 5899999999999999995444555555443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.93 E-value=2.7e-26 Score=202.77 Aligned_cols=162 Identities=23% Similarity=0.404 Sum_probs=137.5
Q ss_pred cchhhhcccCCCCCCeEEEEeeCCccC-CChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCe
Q 011339 262 DISECLNWLDSWPPNSVVYVCLGSICN-LTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGI 340 (488)
Q Consensus 262 ~~~~~~~~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv 340 (488)
++.++.+|++..+++++|||++||... .....+..++++++..+.+++|+.++.. . . . + +.|+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~-~-~---~--~---------~~~v 70 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK-P-D---T--L---------GLNT 70 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC-C-T---T--C---------CTTE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC-c-c---c--C---------CCcE
Confidence 678999999876677899999999974 4567788899999888899999987653 1 0 0 2 3589
Q ss_pred EEecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccc
Q 011339 341 LILGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIG 420 (488)
Q Consensus 341 ~~~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~ 420 (488)
++.+|+||.+++.++.+++||||||+||++|++++|+|+|++|...||..||.++ ++.|+|+.++..
T Consensus 71 ~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~------------ 137 (170)
T 2o6l_A 71 RLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFN------------ 137 (170)
T ss_dssp EEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTT------------
T ss_pred EEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccc------------
Confidence 9999999999996655566999999999999999999999999999999999999 599999999865
Q ss_pred cccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHH
Q 011339 421 VLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAK 457 (488)
Q Consensus 421 ~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~ 457 (488)
.+++++|.++|.++++|+ +|+++++++++.++
T Consensus 138 -~~~~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 138 -TMSSTDLLNALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp -TCCHHHHHHHHHHHHHCH----HHHHHHHHHC----
T ss_pred -cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHhh
Confidence 589999999999999988 89999999998865
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.83 E-value=6.1e-19 Score=174.75 Aligned_cols=343 Identities=12% Similarity=0.062 Sum_probs=202.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccccC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENFDM 89 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~ 89 (488)
|||++++.+..||..+++.|+++|+++||+|++++...... ...+.. .++.++.++.+ ++...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~~~-----~g~~~~~~~~~----~~~~~------ 69 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME--ADLVPK-----HGIEIDFIRIS----GLRGK------ 69 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH--HHHGGG-----GTCEEEECCCC----CCTTC------
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcch--hhhccc-----cCCceEEecCC----ccCcC------
Confidence 89999998888999999999999999999999999864321 111111 26777766532 11110
Q ss_pred CCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC--cchHHHHHhcCCCcEEEecchHHHHHHHhhhcccccc
Q 011339 90 LHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY--PWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTSTVQ 167 (488)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~--~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 167 (488)
.....+...... ......+.+++++ .+||+|+++... ..+..+++.+|+|++......
T Consensus 70 -~~~~~~~~~~~~-~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------- 129 (364)
T 1f0k_A 70 -GIKALIAAPLRI-FNAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------- 129 (364)
T ss_dssp -CHHHHHTCHHHH-HHHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------
T ss_pred -ccHHHHHHHHHH-HHHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------
Confidence 000111001111 1223456677777 799999998643 245677888999988642110
Q ss_pred cccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHhhcCCceEEeCCCCCCCC
Q 011339 168 ENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKKTKGGKVWCLGPVSLCNK 247 (488)
Q Consensus 168 ~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~ 247 (488)
.+++ .. +. ..+..+.++..+ ... + +++..+|.......
T Consensus 130 -----------~~~~------------~~----~~--~~~~~d~v~~~~-~~~-----------~-~~~~~i~n~v~~~~ 167 (364)
T 1f0k_A 130 -----------IAGL------------TN----KW--LAKIATKVMQAF-PGA-----------F-PNAEVVGNPVRTDV 167 (364)
T ss_dssp -----------SCCH------------HH----HH--HTTTCSEEEESS-TTS-----------S-SSCEECCCCCCHHH
T ss_pred -----------CCcH------------HH----HH--HHHhCCEEEecC-hhh-----------c-CCceEeCCccchhh
Confidence 0100 00 00 122344444433 111 2 25667775321100
Q ss_pred CcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcC--CCCeEEEEeCCCCCchhhhhh
Q 011339 248 QDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS--KKPFIWVIRGGNNTSKEIQEW 325 (488)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~v~~~~~~~~~~~~~~~~ 325 (488)
.. .+ ...+.+...+++++|++..|+... ......++++++.. +.++++.++.+. ...
T Consensus 168 -------~~-----~~-~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~--~~~---- 226 (364)
T 1f0k_A 168 -------LA-----LP-LPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS--QQS---- 226 (364)
T ss_dssp -------HT-----SC-CHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--HHH----
T ss_pred -------cc-----cc-hhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--HHH----
Confidence 00 00 011111222345678888888754 22233344555433 455566666543 111
Q ss_pred hhhHHHHHHhcCCCeEEecccch-hhhhccCCcccccccCCchhHHHHhhcCCCEeecCcc---cccchhHHHHHHHhcc
Q 011339 326 LLEEKFEERVKGRGILILGWAPQ-VLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLY---GDQFWNEKLIVQVLNI 401 (488)
Q Consensus 326 ~~p~~~~~~~~~~nv~~~~~~pq-~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~---~DQ~~na~rv~e~~G~ 401 (488)
+.+.. ....-.|+.+.+|+++ ..+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+ .+.|.
T Consensus 227 -l~~~~-~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~-~~~g~ 301 (364)
T 1f0k_A 227 -VEQAY-AEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL-EKAGA 301 (364)
T ss_dssp -HHHHH-HHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH-HHTTS
T ss_pred -HHHHH-hhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH-HhCCc
Confidence 11111 1112258999999954 679999999 99999989999999999999999987 6899999999 49999
Q ss_pred eEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 011339 402 GVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQDIMQQ 480 (488)
Q Consensus 402 G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~ 480 (488)
|..++.. ..++++|.++|.++ |+ +.+++. ++..++. .+..+....++.+.+...++
T Consensus 302 g~~~~~~-------------d~~~~~la~~i~~l--~~----~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 302 AKIIEQP-------------QLSVDAVANTLAGW--SR----ETLLTM---AERARAA-SIPDATERVANEVSRVARAL 357 (364)
T ss_dssp EEECCGG-------------GCCHHHHHHHHHTC--CH----HHHHHH---HHHHHHT-CCTTHHHHHHHHHHHHHTTC
T ss_pred EEEeccc-------------cCCHHHHHHHHHhc--CH----HHHHHH---HHHHHHh-hccCHHHHHHHHHHHHHHHH
Confidence 9988765 46799999999998 66 333332 2222222 22444455555555554443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.63 E-value=8.1e-15 Score=138.52 Aligned_cols=118 Identities=9% Similarity=0.056 Sum_probs=89.3
Q ss_pred CCeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHh-cCCCeEEecccchh-hhh
Q 011339 275 PNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERV-KGRGILILGWAPQV-LIL 352 (488)
Q Consensus 275 ~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq~-~ll 352 (488)
+.+.|+|++|.... ......+++++.... ++.++.+... . ..+.+.... ..+|+.+..|+++. ++|
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~-~--------~~~~l~~~~~~~~~v~v~~~~~~m~~~m 223 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN-P--------NLKKLQKFAKLHNNIRLFIDHENIAKLM 223 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC-T--------THHHHHHHHHTCSSEEEEESCSCHHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc-h--------HHHHHHHHHhhCCCEEEEeCHHHHHHHH
Confidence 45689999996543 335556778876543 5555665554 1 112222222 23589999999886 599
Q ss_pred ccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEeccc
Q 011339 353 SHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVE 408 (488)
Q Consensus 353 ~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~ 408 (488)
+.+++ +||+|| +|++|+++.|+|+|++|...+|..||+.+ ++.|++..+..-
T Consensus 224 ~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~~ 275 (282)
T 3hbm_A 224 NESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKYL 275 (282)
T ss_dssp HTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGGG
T ss_pred HHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcchh
Confidence 99999 999999 89999999999999999999999999999 599999998764
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.55 E-value=6.7e-15 Score=133.49 Aligned_cols=120 Identities=13% Similarity=0.068 Sum_probs=87.5
Q ss_pred CCCeEEEEeeCCccCCChHHHHHH-----HHHHhcCC-CCeEEEEeCCCCCchhhhhhhhhHHHHHHh------------
Q 011339 274 PPNSVVYVCLGSICNLTSSQMIEL-----GLGLEASK-KPFIWVIRGGNNTSKEIQEWLLEEKFEERV------------ 335 (488)
Q Consensus 274 ~~~~vV~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~------------ 335 (488)
+++++|||+.||... -.+.+..+ ++++...+ .+++++++... .. ..+.+....
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~-~~-------~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY-SS-------EFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS-CC-------CCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc-hh-------hHHHHHHhhhccccccccccc
Confidence 456799999999843 23333333 47777777 78999988765 10 011110111
Q ss_pred ---------------cCCCeEEecccchh-hhhc-cCCcccccccCCchhHHHHhhcCCCEeecCcc----cccchhHHH
Q 011339 336 ---------------KGRGILILGWAPQV-LILS-HPSIGGFLTHCSWNSSLEGISAGVPLITWPLY----GDQFWNEKL 394 (488)
Q Consensus 336 ---------------~~~nv~~~~~~pq~-~ll~-~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~----~DQ~~na~r 394 (488)
..-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 01255677888875 7999 9999 99999999999999999999999984 369999999
Q ss_pred HHHHhcceEEe
Q 011339 395 IVQVLNIGVRI 405 (488)
Q Consensus 395 v~e~~G~G~~l 405 (488)
+ ++.|+|+.+
T Consensus 175 l-~~~G~~~~~ 184 (224)
T 2jzc_A 175 F-VELGYVWSC 184 (224)
T ss_dssp H-HHHSCCCEE
T ss_pred H-HHCCCEEEc
Confidence 9 599998755
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.49 E-value=3.8e-11 Score=119.48 Aligned_cols=353 Identities=12% Similarity=0.051 Sum_probs=193.1
Q ss_pred CCCEEEEEcC--C--CccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCC
Q 011339 8 QQPHFVLFPF--L--AQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEG 83 (488)
Q Consensus 8 ~~~kvl~~~~--~--~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~ 83 (488)
+||||++++. + ..|.-.-+..|++.| +||+|++++........... . ...++.++.++.. ..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~-~----~~~~~~~~~~~~~-------~~ 68 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY-D----KTLDYEVIRWPRS-------VM 68 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH-H----TTCSSEEEEESSS-------SC
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh-c----cccceEEEEcccc-------cc
Confidence 7899999985 3 467778899999999 79999999887543321111 1 1236777766421 00
Q ss_pred CccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhcCCCcEEEecchHHHHHHHhhh
Q 011339 84 CENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYP--WTVDTAARFNIPRISFHGFSCFCLLCLYNL 161 (488)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 161 (488)
.... .....+.++++. .+||+|++....+ ....+++.+++|.+++.........
T Consensus 69 ------~~~~-----------~~~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----- 124 (394)
T 3okp_A 69 ------LPTP-----------TTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW----- 124 (394)
T ss_dssp ------CSCH-----------HHHHHHHHHHHH--TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH-----
T ss_pred ------ccch-----------hhHHHHHHHHHh--cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh-----
Confidence 0110 224556777888 7999999765433 4566788899995553322211100
Q ss_pred cccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHhhc--CCceEEe
Q 011339 162 HTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKKTK--GGKVWCL 239 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~--~~~~~~v 239 (488)
... +..... .....+.++.++..|-.. .+.+.+.. ..++..|
T Consensus 125 ------------------~~~----------~~~~~~---~~~~~~~~d~ii~~s~~~-----~~~~~~~~~~~~~~~vi 168 (394)
T 3okp_A 125 ------------------SML----------PGSRQS---LRKIGTEVDVLTYISQYT-----LRRFKSAFGSHPTFEHL 168 (394)
T ss_dssp ------------------TTS----------HHHHHH---HHHHHHHCSEEEESCHHH-----HHHHHHHHCSSSEEEEC
T ss_pred ------------------hhc----------chhhHH---HHHHHHhCCEEEEcCHHH-----HHHHHHhcCCCCCeEEe
Confidence 000 011111 223345677777777332 22233322 2467777
Q ss_pred CCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccC-CChHHHHHHHHHHhcC--CCCeEEEEeCCC
Q 011339 240 GPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICN-LTSSQMIELGLGLEAS--KKPFIWVIRGGN 316 (488)
Q Consensus 240 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~~~~a~~~~--~~~~v~~~~~~~ 316 (488)
..-........ ........+.+.+.-. ++..+++..|+... ...+.+...+..+... +.+++ .++.+.
T Consensus 169 ~ngv~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~g~ 239 (394)
T 3okp_A 169 PSGVDVKRFTP-------ATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLL-IVGSGR 239 (394)
T ss_dssp CCCBCTTTSCC-------CCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEE-EECCCT
T ss_pred cCCcCHHHcCC-------CCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEE-EEcCch
Confidence 64332211000 0000112333333322 22246677787654 2233333333333322 33433 344433
Q ss_pred CCchhhhhhhhhHHHHHHhcCCCeEEecccchhh---hhccCCcccccc-----------cCCchhHHHHhhcCCCEeec
Q 011339 317 NTSKEIQEWLLEEKFEERVKGRGILILGWAPQVL---ILSHPSIGGFLT-----------HCSWNSSLEGISAGVPLITW 382 (488)
Q Consensus 317 ~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~---ll~~~~~~~~It-----------hgG~gs~~eal~~GvP~v~~ 382 (488)
....+.+. -. ....++.+.+|+|+.+ ++..+++ +|. -|..+++.||+++|+|+|+.
T Consensus 240 -~~~~l~~~--~~-----~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~ 309 (394)
T 3okp_A 240 -YESTLRRL--AT-----DVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAG 309 (394)
T ss_dssp -THHHHHHH--TG-----GGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEEC
T ss_pred -HHHHHHHH--Hh-----cccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEe
Confidence 22222221 01 1136899999997544 6788888 665 44457899999999999997
Q ss_pred CcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhc
Q 011339 383 PLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEE 462 (488)
Q Consensus 383 P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~ 462 (488)
+.. .....+ +. |.|..++. -+.+++.++|.++++|++..+.+.+++++....
T Consensus 310 ~~~----~~~e~i-~~-~~g~~~~~---------------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~------- 361 (394)
T 3okp_A 310 TSG----GAPETV-TP-ATGLVVEG---------------SDVDKLSELLIELLDDPIRRAAMGAAGRAHVEA------- 361 (394)
T ss_dssp SST----TGGGGC-CT-TTEEECCT---------------TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-------
T ss_pred CCC----ChHHHH-hc-CCceEeCC---------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-------
Confidence 753 333444 23 36777754 489999999999999875444555555443332
Q ss_pred CCchHHHHHHHHHHHHcCC
Q 011339 463 TRSSSLMIKLLIQDIMQQP 481 (488)
Q Consensus 463 gg~~~~~~~~~i~~~~~~~ 481 (488)
.-+....++++.+.+++..
T Consensus 362 ~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 362 EWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HTBHHHHHHHHHHHHHSCC
T ss_pred hCCHHHHHHHHHHHHHHhc
Confidence 2344566666666666554
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.43 E-value=1.3e-10 Score=117.68 Aligned_cols=357 Identities=14% Similarity=0.090 Sum_probs=181.0
Q ss_pred CCCEEEEEcC---C--------CccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCcc
Q 011339 8 QQPHFVLFPF---L--------AQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQ 76 (488)
Q Consensus 8 ~~~kvl~~~~---~--------~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 76 (488)
+||||++++. | ..|+-..+..|+++|.++||+|++++.......- .. . ....+++++.++....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-~~-~---~~~~~v~v~~~~~~~~ 93 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG-EI-V---RVAENLRVINIAAGPY 93 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC-SE-E---EEETTEEEEEECCSCS
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc-cc-c---cccCCeEEEEecCCCc
Confidence 7899999995 2 3677888999999999999999999875321110 00 0 0012566766652110
Q ss_pred ccCCCCCCccccCCCchhhHHHHHHHHHHhhHHHHHH-HHhcCCCCeEEEEcCCCc--chHHHHHhcCCCcEEEecchHH
Q 011339 77 EAGVPEGCENFDMLHSTDLVSNFFKSLRLLQLPLENL-LKELTPKPSCIVSDTCYP--WTVDTAARFNIPRISFHGFSCF 153 (488)
Q Consensus 77 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~pD~vv~D~~~~--~~~~~a~~lgiP~v~~~~~~~~ 153 (488)
. ... . ......+..+ ...+.+. ++.. .+||+|++..... .+..+++.+++|++........
T Consensus 94 ~-----~~~-~--~~~~~~~~~~-------~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~ 157 (438)
T 3c48_A 94 E-----GLS-K--EELPTQLAAF-------TGGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA 157 (438)
T ss_dssp S-----SCC-G--GGGGGGHHHH-------HHHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred c-----ccc-h--hHHHHHHHHH-------HHHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcc
Confidence 0 000 0 0001111111 1222233 4441 2599999875322 3445677889998875433221
Q ss_pred HHHHHhhhcccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHhhcC
Q 011339 154 CLLCLYNLHTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKKTKG 233 (488)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~ 233 (488)
.. .........+. +...... .....+.++.++..+-...+ .+.+.++
T Consensus 158 ~~------------------~~~~~~~~~~~--------~~~~~~~--~~~~~~~~d~ii~~s~~~~~-----~~~~~~g 204 (438)
T 3c48_A 158 VK------------------NSYRDDSDTPE--------SEARRIC--EQQLVDNADVLAVNTQEEMQ-----DLMHHYD 204 (438)
T ss_dssp HH------------------SCC----CCHH--------HHHHHHH--HHHHHHHCSEEEESSHHHHH-----HHHHHHC
T ss_pred cc------------------cccccccCCcc--------hHHHHHH--HHHHHhcCCEEEEcCHHHHH-----HHHHHhC
Confidence 10 00000000000 0011111 12234567777777743222 2322221
Q ss_pred ---CceEEeCCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccC-CChHHHHHHHHHHh-cCC-CC
Q 011339 234 ---GKVWCLGPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICN-LTSSQMIELGLGLE-ASK-KP 307 (488)
Q Consensus 234 ---~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~~~~a~~-~~~-~~ 307 (488)
.++..|............ .......+.+.+.-.+++ .+++..|+... ...+.+...+..+. ..+ ..
T Consensus 205 ~~~~k~~vi~ngvd~~~~~~~-------~~~~~~~~r~~~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~ 276 (438)
T 3c48_A 205 ADPDRISVVSPGADVELYSPG-------NDRATERSRRELGIPLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRN 276 (438)
T ss_dssp CCGGGEEECCCCCCTTTSCCC-----------CHHHHHHTTCCSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCS
T ss_pred CChhheEEecCCccccccCCc-------ccchhhhhHHhcCCCCCC-cEEEEEeeecccCCHHHHHHHHHHHHhhCCCcc
Confidence 356666643322110000 000001122222222233 45677787764 22333333333332 221 23
Q ss_pred e-EEEEeC----CCCCchhhhhhhhhHHHHHHh-cCCCeEEecccch---hhhhccCCccccccc----CCchhHHHHhh
Q 011339 308 F-IWVIRG----GNNTSKEIQEWLLEEKFEERV-KGRGILILGWAPQ---VLILSHPSIGGFLTH----CSWNSSLEGIS 374 (488)
Q Consensus 308 ~-v~~~~~----~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq---~~ll~~~~~~~~Ith----gG~gs~~eal~ 374 (488)
+ ++.++. +. ....+.+ +..+. ..+++.+.+|+|+ ..++..+++ +|.- |...++.||++
T Consensus 277 ~~l~i~G~~~~~g~-~~~~l~~------~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama 347 (438)
T 3c48_A 277 LRVIICGGPSGPNA-TPDTYRH------MAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQA 347 (438)
T ss_dssp EEEEEECCBC-------CHHHH------HHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHH
T ss_pred eEEEEEeCCCCCCc-HHHHHHH------HHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHH
Confidence 3 333443 11 1111111 11111 2468999999976 457888888 6643 22468999999
Q ss_pred cCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHH
Q 011339 375 AGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQI 454 (488)
Q Consensus 375 ~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~ 454 (488)
+|+|+|+.+. ......+ +.-+.|..++. -+.+++.++|.++++|++..+.+.+++++..+
T Consensus 348 ~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~---------------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 407 (438)
T 3c48_A 348 SGTPVIAARV----GGLPIAV-AEGETGLLVDG---------------HSPHAWADALATLLDDDETRIRMGEDAVEHAR 407 (438)
T ss_dssp TTCCEEEESC----TTHHHHS-CBTTTEEEESS---------------CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCCCEEecCC----CChhHHh-hCCCcEEECCC---------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 9999999764 3455556 45566777754 48899999999999988655666677766655
Q ss_pred H
Q 011339 455 M 455 (488)
Q Consensus 455 ~ 455 (488)
.
T Consensus 408 ~ 408 (438)
T 3c48_A 408 T 408 (438)
T ss_dssp H
T ss_pred h
Confidence 5
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.36 E-value=1.1e-10 Score=115.71 Aligned_cols=316 Identities=15% Similarity=0.058 Sum_probs=162.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCCcchhhhHHHHHhhhcCCCCeEE-EEeeCCccccCCCCCCc
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH-GAAITIVTTPANAARFKTVVARAMQSGLPLQL-IEIQFPYQEAGVPEGCE 85 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~l~~~~~ 85 (488)
.||||++++.. .++......|+++|.++ ||+|.++++............. .++.+ +.++ +...
T Consensus 4 ~mmkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~-- 68 (376)
T 1v4v_A 4 GMKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSL-----FGIQEDRNLD-------VMQE-- 68 (376)
T ss_dssp CCEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHT-----TTCCCSEECC-------CCSS--
T ss_pred CceEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHH-----cCCCcccccc-------cCCC--
Confidence 47899998853 33344567789999998 8998877665332222222221 13332 2222 1100
Q ss_pred cccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcC--CC-cchHHHHHhcCCCcEEEecchHHHHHHHhhhc
Q 011339 86 NFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDT--CY-PWTVDTAARFNIPRISFHGFSCFCLLCLYNLH 162 (488)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~--~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~ 162 (488)
.. .....+ ......+.+++++ .+||+|++-. .. +.+..+|+.+|+|++.+.....
T Consensus 69 ----~~--~~~~~~----~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~---------- 126 (376)
T 1v4v_A 69 ----RQ--ALPDLA----ARILPQAARALKE--MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLR---------- 126 (376)
T ss_dssp ----CC--CHHHHH----HHHHHHHHHHHHH--TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCC----------
T ss_pred ----Cc--cHHHHH----HHHHHHHHHHHHH--cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCc----------
Confidence 00 111111 1123456778888 8999999832 22 2456788999999875421100
Q ss_pred ccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHh-hcC-CceEEeC
Q 011339 163 TSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKK-TKG-GKVWCLG 240 (488)
Q Consensus 163 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~~-~~~~~vG 240 (488)
. ......++ .....+.. ....+.++..+-.. .+.+.+ ..+ .++..+|
T Consensus 127 -----------~-~~~~~~~~------------~~~~~~~~--~~~~~~~~~~s~~~-----~~~l~~~g~~~~ki~vi~ 175 (376)
T 1v4v_A 127 -----------S-GNLKEPFP------------EEANRRLT--DVLTDLDFAPTPLA-----KANLLKEGKREEGILVTG 175 (376)
T ss_dssp -----------C-SCTTSSTT------------HHHHHHHH--HHHCSEEEESSHHH-----HHHHHTTTCCGGGEEECC
T ss_pred -----------c-ccccCCCc------------hHHHHHHH--HHHhceeeCCCHHH-----HHHHHHcCCCcceEEEEC
Confidence 0 00000000 11111111 12244555554221 122222 122 3577787
Q ss_pred CCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhc----C-CCCeEEEEeCC
Q 011339 241 PVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEA----S-KKPFIWVIRGG 315 (488)
Q Consensus 241 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~----~-~~~~v~~~~~~ 315 (488)
....+.... . . ...++.+.+ +++++|+++.|...... .+..++++++. . +..+++..+.+
T Consensus 176 n~~~d~~~~-~-~--------~~~~~~~~~---~~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~ 240 (376)
T 1v4v_A 176 QTGVDAVLL-A-A--------KLGRLPEGL---PEGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN 240 (376)
T ss_dssp CHHHHHHHH-H-H--------HHCCCCTTC---CSSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC
T ss_pred CchHHHHhh-h-h--------hhhHHHHhc---CCCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC
Confidence 532110000 0 0 001111122 23457777777653321 33445555542 2 33444333322
Q ss_pred CCCchhhhhhhhhHHHHHHhc-CCCeEEecccch---hhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchh
Q 011339 316 NNTSKEIQEWLLEEKFEERVK-GRGILILGWAPQ---VLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWN 391 (488)
Q Consensus 316 ~~~~~~~~~~~~p~~~~~~~~-~~nv~~~~~~pq---~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~n 391 (488)
. . +-+.+..... .+++++.+++++ ..+++.+++ ||+.+| |.+.||+++|+|+|+.+..+++..
T Consensus 241 ~----~-----~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~- 307 (376)
T 1v4v_A 241 P----V-----VREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE- 307 (376)
T ss_dssp H----H-----HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH-
T ss_pred H----H-----HHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh-
Confidence 1 0 1112222221 358888855544 578999998 998873 456699999999999887666654
Q ss_pred HHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccC
Q 011339 392 EKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEG 439 (488)
Q Consensus 392 a~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~ 439 (488)
+. +.|.|..++ .++++|.++|.++++|+
T Consensus 308 ---~~-~~g~g~lv~----------------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 308 ---GL-KAGILKLAG----------------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp ---HH-HHTSEEECC----------------SCHHHHHHHHHHHHTCH
T ss_pred ---hh-cCCceEECC----------------CCHHHHHHHHHHHHhCh
Confidence 33 567776652 37899999999999987
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.35 E-value=2e-10 Score=114.89 Aligned_cols=324 Identities=12% Similarity=0.092 Sum_probs=169.8
Q ss_pred CCCEEEEEcCC---C-ccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCC
Q 011339 8 QQPHFVLFPFL---A-QGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEG 83 (488)
Q Consensus 8 ~~~kvl~~~~~---~-~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~ 83 (488)
+||||++++.. . .|.-.-...++++|.++||+|++++.......+..... .+ + +++.++.. ..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~----~~-~-~~~~~~~~-------~~ 85 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV----SG-G-KAVPIPYN-------GS 85 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE----EC-C-CCC--------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc----cC-C-cEEecccc-------CC
Confidence 78999999842 2 56667899999999999999999988643221100000 00 0 11111100 00
Q ss_pred CccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhcCCCcEEEecchHHHHHHHhhh
Q 011339 84 CENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYP--WTVDTAARFNIPRISFHGFSCFCLLCLYNL 161 (488)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 161 (488)
. ....+ .......+.++++. .+||+|++..... .+..+++..++|++.......
T Consensus 86 ~------~~~~~-------~~~~~~~l~~~l~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~--------- 141 (406)
T 2gek_A 86 V------ARLRF-------GPATHRKVKKWIAE--GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST--------- 141 (406)
T ss_dssp -----------C-------CHHHHHHHHHHHHH--HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC---------
T ss_pred c------ccccc-------cHHHHHHHHHHHHh--cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc---------
Confidence 0 00000 00123456677777 6999999876443 345667778999887532210
Q ss_pred cccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHhhcC-CceEEeC
Q 011339 162 HTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKKTKG-GKVWCLG 240 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~-~~~~~vG 240 (488)
+... ........+.......+.++..+-.. .+.+.+.++ .++ .|.
T Consensus 142 ---------------------~~~~-------~~~~~~~~~~~~~~~~d~ii~~s~~~-----~~~~~~~~~~~~~-vi~ 187 (406)
T 2gek_A 142 ---------------------TKSL-------TLSVFQGILRPYHEKIIGRIAVSDLA-----RRWQMEALGSDAV-EIP 187 (406)
T ss_dssp ---------------------CSHH-------HHHHHHSTTHHHHTTCSEEEESSHHH-----HHHHHHHHSSCEE-ECC
T ss_pred ---------------------hhhh-------hHHHHHHHHHHHHhhCCEEEECCHHH-----HHHHHHhcCCCcE-Eec
Confidence 0000 00111111113345677777777332 122222333 345 555
Q ss_pred CCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCc-cC-CChHHHHHHHHHHhcCCCCe-EEEEeCCCC
Q 011339 241 PVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSI-CN-LTSSQMIELGLGLEASKKPF-IWVIRGGNN 317 (488)
Q Consensus 241 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~-~~-~~~~~~~~~~~a~~~~~~~~-v~~~~~~~~ 317 (488)
+..... ... . .. . ..-+.. ++ .+++..|+. .. ...+.+...+..+......+ +..++...
T Consensus 188 ~~v~~~--~~~----~-----~~-~-~~~~~~--~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~- 250 (406)
T 2gek_A 188 NGVDVA--SFA----D-----AP-L-LDGYPR--EG-RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGD- 250 (406)
T ss_dssp CCBCHH--HHH----T-----CC-C-CTTCSC--SS-CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSC-
T ss_pred CCCChh--hcC----C-----Cc-h-hhhccC--CC-eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCc-
Confidence 332110 000 0 00 0 000111 12 466777877 43 23333333333333322233 33444443
Q ss_pred CchhhhhhhhhHHHHHHhc--CCCeEEecccchh---hhhccCCcccccc----cCCc-hhHHHHhhcCCCEeecCcccc
Q 011339 318 TSKEIQEWLLEEKFEERVK--GRGILILGWAPQV---LILSHPSIGGFLT----HCSW-NSSLEGISAGVPLITWPLYGD 387 (488)
Q Consensus 318 ~~~~~~~~~~p~~~~~~~~--~~nv~~~~~~pq~---~ll~~~~~~~~It----hgG~-gs~~eal~~GvP~v~~P~~~D 387 (488)
. +.+..... ..|+.+.+|+++. .++..+++ +|. +.|. +++.||+++|+|+|+.+.
T Consensus 251 ---------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~--- 315 (406)
T 2gek_A 251 ---------E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL--- 315 (406)
T ss_dssp ---------H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC---
T ss_pred ---------H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC---
Confidence 1 22222221 4689999999874 68889998 653 3444 489999999999999866
Q ss_pred cchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHH
Q 011339 388 QFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRARE 451 (488)
Q Consensus 388 Q~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~ 451 (488)
......+ +.-+.|..++. -+.+++.++|.++++|++..+.+.+++++
T Consensus 316 -~~~~e~i-~~~~~g~~~~~---------------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~ 362 (406)
T 2gek_A 316 -DAFRRVL-ADGDAGRLVPV---------------DDADGMAAALIGILEDDQLRAGYVARASE 362 (406)
T ss_dssp -HHHHHHH-TTTTSSEECCT---------------TCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred -CcHHHHh-cCCCceEEeCC---------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 4455666 46667877754 47899999999999987433334444443
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.32 E-value=1.4e-10 Score=115.19 Aligned_cols=365 Identities=12% Similarity=0.071 Sum_probs=179.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCC-eEEEEeCCcchhhhHHHHHhhhcCCCCeEE-EEeeCCccccCCCCCCccc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGA-AITIVTTPANAARFKTVVARAMQSGLPLQL-IEIQFPYQEAGVPEGCENF 87 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH-~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~l~~~~~~~ 87 (488)
|||++++. ..++......|+++|.++|+ +|.++.+.............. ++.+ ..++ +...
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~-------~~~~---- 63 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF-----SIVPDYDLN-------IMQP---- 63 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHH-----TCCCSEECC-------CCST----
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHc-----CCCCCccee-------cCCC----
Confidence 78988764 46677788999999999995 877654432211112222221 3333 2322 1110
Q ss_pred cCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCC---CcchHHHHHhcCCCcEEEecchHHHHHHHhhhccc
Q 011339 88 DMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTC---YPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTS 164 (488)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~---~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 164 (488)
.. ...... ......+.++++. .+||+|++-.. .+.+..+++.+|+|++.+.....
T Consensus 64 --~~--~~~~~~----~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~------------ 121 (384)
T 1vgv_A 64 --GQ--GLTEIT----CRILEGLKPILAE--FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR------------ 121 (384)
T ss_dssp --TS--CHHHHH----HHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC------------
T ss_pred --Cc--cHHHHH----HHHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc------------
Confidence 00 111111 1224556777888 79999998432 23456678889999876422100
Q ss_pred ccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHh-hcC-CceEEeCCC
Q 011339 165 TVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKK-TKG-GKVWCLGPV 242 (488)
Q Consensus 165 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~~-~~~~~vGpl 242 (488)
....+ ..++ ........ .+..+.++..+-... +.+.. ..+ .++..+|..
T Consensus 122 ---------~~~~~-~~~~------------~~~~~~~~--~~~~d~ii~~s~~~~-----~~l~~~g~~~~~i~vi~n~ 172 (384)
T 1vgv_A 122 ---------TGDLY-SPWP------------EEANRTLT--GHLAMYHFSPTETSR-----QNLLRENVADSRIFITGNT 172 (384)
T ss_dssp ---------CSCTT-SSTT------------HHHHHHHH--HTTCSEEEESSHHHH-----HHHHHTTCCGGGEEECCCH
T ss_pred ---------ccccc-CCCc------------hHhhHHHH--HhhccEEEcCcHHHH-----HHHHHcCCChhhEEEeCCh
Confidence 00000 0000 11111110 123566666552221 12221 121 357777743
Q ss_pred CCCCCCcchhhhhCCCCcccchhhhcccC-CCCCCeEEEEeeCCccCCChHHHHHHHHHHhc----C-CCCeEEEEeCCC
Q 011339 243 SLCNKQDIDKAERGKKAAVDISECLNWLD-SWPPNSVVYVCLGSICNLTSSQMIELGLGLEA----S-KKPFIWVIRGGN 316 (488)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~----~-~~~~v~~~~~~~ 316 (488)
..+.... . ............++.+.+. -.+++++|+++.|....... .+..++++++. . +.++++..+.+.
T Consensus 173 ~~d~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~ 249 (384)
T 1vgv_A 173 VIDALLW-V-RDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNP 249 (384)
T ss_dssp HHHHHHH-H-HHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCH
T ss_pred HHHHHHh-h-hhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCH
Confidence 1110000 0 0000000000012333332 21345678888887764322 23344444432 2 334444323211
Q ss_pred CCchhhhhhhhhHHHHHHhc-CCCeEEecccch---hhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhH
Q 011339 317 NTSKEIQEWLLEEKFEERVK-GRGILILGWAPQ---VLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNE 392 (488)
Q Consensus 317 ~~~~~~~~~~~p~~~~~~~~-~~nv~~~~~~pq---~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na 392 (488)
. +-+.+..... .+++++.+++++ ..+++.+++ ||+..| +.+.||+++|+|+|+.+..++.
T Consensus 250 ----~-----~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~---- 313 (384)
T 1vgv_A 250 ----N-----VREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTER---- 313 (384)
T ss_dssp ----H-----HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSC----
T ss_pred ----H-----HHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCc----
Confidence 1 1112222212 368888666654 568889998 998875 4588999999999999874433
Q ss_pred HHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 011339 393 KLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKL 472 (488)
Q Consensus 393 ~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 472 (488)
..+. +.|.|..++ .++++|.++|.++++|++..+.+.+++ ++. .++.+....++.
T Consensus 314 ~e~v-~~g~g~lv~----------------~d~~~la~~i~~ll~d~~~~~~~~~~~-------~~~-~~~~~~~~i~~~ 368 (384)
T 1vgv_A 314 PEAV-TAGTVRLVG----------------TDKQRIVEEVTRLLKDENEYQAMSRAH-------NPY-GDGQACSRILEA 368 (384)
T ss_dssp HHHH-HHTSEEEEC----------------SSHHHHHHHHHHHHHCHHHHHHHHSSC-------CTT-CCSCHHHHHHHH
T ss_pred chhh-hCCceEEeC----------------CCHHHHHHHHHHHHhChHHHhhhhhcc-------CCC-cCCCHHHHHHHH
Confidence 3343 667787663 278999999999999873222333332 222 234554444444
Q ss_pred HHHHHHcCCCCCCC
Q 011339 473 LIQDIMQQPHGDDQ 486 (488)
Q Consensus 473 ~i~~~~~~~~~~~~ 486 (488)
+.+.+.+..++.+.
T Consensus 369 ~~~~~~~~~~~~~~ 382 (384)
T 1vgv_A 369 LKNNRISLGSHHHH 382 (384)
T ss_dssp HHHTCCCC------
T ss_pred HHHHHHhhcccccc
Confidence 44444444443333
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.29 E-value=1.2e-09 Score=112.61 Aligned_cols=95 Identities=11% Similarity=0.123 Sum_probs=67.6
Q ss_pred CCCeEEecccchh---hhhccC----Cccccccc---CCc-hhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEe
Q 011339 337 GRGILILGWAPQV---LILSHP----SIGGFLTH---CSW-NSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRI 405 (488)
Q Consensus 337 ~~nv~~~~~~pq~---~ll~~~----~~~~~Ith---gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l 405 (488)
.++|.+.+++|+. .++..+ ++ +|.- -|. .++.||+++|+|+|+... ......+ +.-..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe
Confidence 4689999999764 467778 77 6632 243 589999999999999764 3455555 355567777
Q ss_pred cccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHH
Q 011339 406 GVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQ 453 (488)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~ 453 (488)
+. -+.++++++|.++++|++..+.+.+++++..
T Consensus 407 ~~---------------~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 439 (499)
T 2r60_A 407 DP---------------EDPEDIARGLLKAFESEETWSAYQEKGKQRV 439 (499)
T ss_dssp CT---------------TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CC---------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 64 4889999999999998754445555554433
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.29 E-value=1.7e-08 Score=101.60 Aligned_cols=166 Identities=13% Similarity=0.104 Sum_probs=101.4
Q ss_pred EEEEeeCCcc-C-CChHHHHHHHHHHhcCC--CCeEEEEeCCCCCchhhhhhhhhHHHHHHh--cCCCeEEecccchhh-
Q 011339 278 VVYVCLGSIC-N-LTSSQMIELGLGLEASK--KPFIWVIRGGNNTSKEIQEWLLEEKFEERV--KGRGILILGWAPQVL- 350 (488)
Q Consensus 278 vV~vs~Gs~~-~-~~~~~~~~~~~a~~~~~--~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~nv~~~~~~pq~~- 350 (488)
.+++..|+.. . ...+.+...+..+.... ..+-+.+-+.. .. . ..+.+.... ...++.+.+|+|+.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g-~~-~-----~~~~l~~~~~~~~~~~~~~g~~~~~~~ 324 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG-DP-E-----LEGWARSLEEKHGNVKVITEMLSREFV 324 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCC-CH-H-----HHHHHHHHHHHCTTEEEECSCCCHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCC-Ch-h-----HHHHHHHHHhhcCCEEEEcCCCCHHHH
Confidence 5668888887 4 34444444444454422 23333333332 11 1 011222111 125566778898754
Q ss_pred --hhccCCccccccc----CCchhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccC
Q 011339 351 --ILSHPSIGGFLTH----CSWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVK 424 (488)
Q Consensus 351 --ll~~~~~~~~Ith----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~ 424 (488)
++..+++ +|.- |--+++.||+++|+|+|+... ......+ .-|.|..++. -+
T Consensus 325 ~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~--~~~~g~~~~~---------------~d 381 (439)
T 3fro_A 325 RELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII--TNETGILVKA---------------GD 381 (439)
T ss_dssp HHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC--CTTTCEEECT---------------TC
T ss_pred HHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE--EcCceEEeCC---------------CC
Confidence 6778888 6632 333689999999999999754 3444444 3457877765 48
Q ss_pred HHHHHHHHHHHHc-cCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCC
Q 011339 425 KEDVVKAINILMD-EGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQDIMQQP 481 (488)
Q Consensus 425 ~~~l~~ai~~~l~-~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~~ 481 (488)
.+++.++|.++++ |++..+.+.+++++..+ .-+....++++.+.+.+..
T Consensus 382 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 382 PGELANAILKALELSRSDLSKFRENCKKRAM--------SFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH--------TSCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh--------hCcHHHHHHHHHHHHHHHH
Confidence 9999999999999 88766677777766552 2455566667766666544
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.23 E-value=1.7e-09 Score=107.96 Aligned_cols=329 Identities=10% Similarity=0.055 Sum_probs=167.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCCcchhhhHHHHHhhhcCCCCeEE-EEeeCCccccCCCCCC
Q 011339 7 CQQPHFVLFPFLAQGHMIPMIDTARLLAQH-GAAITIVTTPANAARFKTVVARAMQSGLPLQL-IEIQFPYQEAGVPEGC 84 (488)
Q Consensus 7 ~~~~kvl~~~~~~~GHv~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~l~~~~ 84 (488)
++||||++++. +.....=+..|.++|.++ |+++.++.+....+.....++.. +++. +.+. +-..
T Consensus 23 ~~m~ki~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~-----~i~~~~~l~-------~~~~- 88 (396)
T 3dzc_A 23 NAMKKVLIVFG-TRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELF-----SITPDFDLN-------IMEP- 88 (396)
T ss_dssp -CCEEEEEEEC-SHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHT-----TCCCSEECC-------CCCT-
T ss_pred CCCCeEEEEEe-ccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhc-----CCCCceeee-------cCCC-
Confidence 47889988774 555566667889999987 78887555543222122222221 3311 1111 1000
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcC--CC-cchHHHHHhcCCCcEEEecchHHHHHHHhhh
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDT--CY-PWTVDTAARFNIPRISFHGFSCFCLLCLYNL 161 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~--~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 161 (488)
....... .......+.+++++ .+||+|++-. .. +.+..+|..+|||++.+.... .
T Consensus 89 -------~~~~~~~----~~~~~~~l~~~l~~--~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-r-------- 146 (396)
T 3dzc_A 89 -------GQTLNGV----TSKILLGMQQVLSS--EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-R-------- 146 (396)
T ss_dssp -------TCCHHHH----HHHHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC-C--------
T ss_pred -------CCCHHHH----HHHHHHHHHHHHHh--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-c--------
Confidence 0011111 23346677888888 7999998733 22 345678999999987642110 0
Q ss_pred cccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHh-hcC-CceEEe
Q 011339 162 HTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKK-TKG-GKVWCL 239 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~~-~~~~~v 239 (488)
. ......+| ....+.+. ...++.++..+- ...+.+.+ -.+ .++.++
T Consensus 147 ------------s-~~~~~~~~------------~~~~r~~~--~~~a~~~~~~se-----~~~~~l~~~G~~~~ki~vv 194 (396)
T 3dzc_A 147 ------------T-GNIYSPWP------------EEGNRKLT--AALTQYHFAPTD-----TSRANLLQENYNAENIFVT 194 (396)
T ss_dssp ------------C-SCTTSSTT------------HHHHHHHH--HHTCSEEEESSH-----HHHHHHHHTTCCGGGEEEC
T ss_pred ------------c-cccccCCc------------HHHHHHHH--HHhcCEEECCCH-----HHHHHHHHcCCCcCcEEEE
Confidence 0 00000011 11111111 123445555552 22222222 222 468889
Q ss_pred CCCCCCCCCcchhhhhCCCCcccchhhhcccCC-CCCCeEEEEeeCCccCCChHHHHHHHHHHhcC-----CCCeEEEEe
Q 011339 240 GPVSLCNKQDIDKAERGKKAAVDISECLNWLDS-WPPNSVVYVCLGSICNLTSSQMIELGLGLEAS-----KKPFIWVIR 313 (488)
Q Consensus 240 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~v~~~~ 313 (488)
|....+.-.. .. ..........+++.+.+.- .+++++|+++.+-...... .+..++++++.. +.++|+..+
T Consensus 195 Gn~~~d~~~~-~~-~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g 271 (396)
T 3dzc_A 195 GNTVIDALLA-VR-EKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVH 271 (396)
T ss_dssp CCHHHHHHHH-HH-HHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECC
T ss_pred CCcHHHHHHH-hh-hhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeC
Confidence 8422110000 00 0000000001233333331 2345677777633222222 244555555432 345555443
Q ss_pred CCCCCchhhhhhhhhHHHHHHh-cCCCeEEecccc---hhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccc
Q 011339 314 GGNNTSKEIQEWLLEEKFEERV-KGRGILILGWAP---QVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQF 389 (488)
Q Consensus 314 ~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~p---q~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~ 389 (488)
.+. . +-+.+.... ..+++++.++++ ...+++.+++ +|+-.| |.+.||+++|+|+|+..-..+++
T Consensus 272 ~~~----~-----~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~ 339 (396)
T 3dzc_A 272 LNP----N-----VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP 339 (396)
T ss_dssp BCH----H-----HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH
T ss_pred CCh----H-----HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch
Confidence 221 1 111121211 246888877764 4568889998 999887 66679999999999975444443
Q ss_pred hhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccC
Q 011339 390 WNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEG 439 (488)
Q Consensus 390 ~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~ 439 (488)
.+. +.|.+..+ . .++++|.+++.++++|+
T Consensus 340 ----e~v-~~G~~~lv--~--------------~d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 340 ----EAV-AAGTVKLV--G--------------TNQQQICDALSLLLTDP 368 (396)
T ss_dssp ----HHH-HHTSEEEC--T--------------TCHHHHHHHHHHHHHCH
T ss_pred ----HHH-HcCceEEc--C--------------CCHHHHHHHHHHHHcCH
Confidence 243 66776443 2 36899999999999987
No 33
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.23 E-value=1.1e-08 Score=101.84 Aligned_cols=352 Identities=12% Similarity=0.062 Sum_probs=179.1
Q ss_pred CCEEEEEcCCCc-cCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccc
Q 011339 9 QPHFVLFPFLAQ-GHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENF 87 (488)
Q Consensus 9 ~~kvl~~~~~~~-GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~ 87 (488)
++|+....+|.. |.-.-+..|+++|+++||+|++++...... .. ....++.+..++.+. ....
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~-------~~~~~i~~~~~~~~~--------~~~~ 78 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN-------KVYPNIYFHEVTVNQ--------YSVF 78 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------------CCCTTEEEECCCCC------------C
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc-------ccCCceEEEeccccc--------cccc
Confidence 367777777754 555667899999999999999998753211 00 012256555443211 0000
Q ss_pred cCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCc--chHHHHH-hc--CCCcEEEecchHHHHHHHhhhc
Q 011339 88 DMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYP--WTVDTAA-RF--NIPRISFHGFSCFCLLCLYNLH 162 (488)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~--~~~~~a~-~l--giP~v~~~~~~~~~~~~~~~~~ 162 (488)
. ... . . ......+.++++. .+||+|++..... ....++. .+ ++|++......... .
T Consensus 79 ~-~~~---~-~-----~~~~~~l~~~l~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------~- 139 (394)
T 2jjm_A 79 Q-YPP---Y-D-----LALASKMAEVAQR--ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT------V- 139 (394)
T ss_dssp C-SCC---H-H-----HHHHHHHHHHHHH--HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH------T-
T ss_pred c-ccc---c-c-----HHHHHHHHHHHHH--cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc------c-
Confidence 0 000 0 0 0123445666777 6999999875432 2233444 33 48987653331110 0
Q ss_pred ccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHhhcC--CceEEeC
Q 011339 163 TSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKKTKG--GKVWCLG 240 (488)
Q Consensus 163 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~--~~~~~vG 240 (488)
.+... .+... .....+.++.++..+-.. .+.+.+.++ .++..|.
T Consensus 140 -----------------~~~~~---------~~~~~---~~~~~~~ad~ii~~s~~~-----~~~~~~~~~~~~~~~vi~ 185 (394)
T 2jjm_A 140 -----------------LGSDP---------SLNNL---IRFGIEQSDVVTAVSHSL-----INETHELVKPNKDIQTVY 185 (394)
T ss_dssp -----------------TTTCT---------TTHHH---HHHHHHHSSEEEESCHHH-----HHHHHHHTCCSSCEEECC
T ss_pred -----------------cCCCH---------HHHHH---HHHHHhhCCEEEECCHHH-----HHHHHHhhCCcccEEEec
Confidence 00000 01111 112234567777766332 223333332 4667676
Q ss_pred CCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccC-CChHHHHHHHHHHhcC-CCCeEEEEeCCCCC
Q 011339 241 PVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICN-LTSSQMIELGLGLEAS-KKPFIWVIRGGNNT 318 (488)
Q Consensus 241 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~~~~a~~~~-~~~~v~~~~~~~~~ 318 (488)
......... .....++.+.+.-.++ ..+++..|.... ...+.+...+..+... +.+ ++.++.+. .
T Consensus 186 ngv~~~~~~----------~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~-l~i~G~g~-~ 252 (394)
T 2jjm_A 186 NFIDERVYF----------KRDMTQLKKEYGISES-EKILIHISNFRKVKRVQDVVQAFAKIVTEVDAK-LLLVGDGP-E 252 (394)
T ss_dssp CCCCTTTCC----------CCCCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCE-EEEECCCT-T
T ss_pred CCccHHhcC----------CcchHHHHHHcCCCCC-CeEEEEeeccccccCHHHHHHHHHHHHhhCCCE-EEEECCch-H
Confidence 433221100 0011222222221112 245566777654 2233333333333322 333 34444433 1
Q ss_pred chhhhhhhhhHHHHHHhc----CCCeEEecccch-hhhhccCCccccc----ccCCchhHHHHhhcCCCEeecCcccccc
Q 011339 319 SKEIQEWLLEEKFEERVK----GRGILILGWAPQ-VLILSHPSIGGFL----THCSWNSSLEGISAGVPLITWPLYGDQF 389 (488)
Q Consensus 319 ~~~~~~~~~p~~~~~~~~----~~nv~~~~~~pq-~~ll~~~~~~~~I----thgG~gs~~eal~~GvP~v~~P~~~DQ~ 389 (488)
. +.+..... ..++.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|+.+..
T Consensus 253 ~---------~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~---- 317 (394)
T 2jjm_A 253 F---------CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG---- 317 (394)
T ss_dssp H---------HHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----
T ss_pred H---------HHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----
Confidence 1 12222211 357777777544 568889998 77 445567999999999999998753
Q ss_pred hhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 011339 390 WNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLM 469 (488)
Q Consensus 390 ~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~ 469 (488)
.....+ +.-+.|..++. -+.+++.++|.++++|++..+.+.+++++... +.-+....
T Consensus 318 ~~~e~v-~~~~~g~~~~~---------------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-------~~~s~~~~ 374 (394)
T 2jjm_A 318 GIPEVI-QHGDTGYLCEV---------------GDTTGVADQAIQLLKDEELHRNMGERARESVY-------EQFRSEKI 374 (394)
T ss_dssp TSTTTC-CBTTTEEEECT---------------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-------HHSCHHHH
T ss_pred ChHHHh-hcCCceEEeCC---------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-------HhCCHHHH
Confidence 333444 34456777754 37899999999999987444445555544331 23344455
Q ss_pred HHHHHHHHHcC
Q 011339 470 IKLLIQDIMQQ 480 (488)
Q Consensus 470 ~~~~i~~~~~~ 480 (488)
++++.+.+.+.
T Consensus 375 ~~~~~~~~~~~ 385 (394)
T 2jjm_A 375 VSQYETIYYDV 385 (394)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 55555555443
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.20 E-value=9e-10 Score=110.20 Aligned_cols=320 Identities=12% Similarity=0.044 Sum_probs=162.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCcchhhhHHHHHhhhcCCCCeEE-EEeeCCccccCCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTPANAARFKTVVARAMQSGLPLQL-IEIQFPYQEAGVPEGC 84 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~l~~~~ 84 (488)
+||||++++. +.....=+..|.++|.++ |+++.++.+....+.....++.. +++. +.+. +-...
T Consensus 26 ~~~kI~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~-----~i~~~~~l~-------v~~~~ 92 (403)
T 3ot5_A 26 AKIKVMSIFG-TRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIF-----DIKPDIDLD-------IMKKG 92 (403)
T ss_dssp CCEEEEEEEC-SHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHT-----TCCCSEECC-------CCC-C
T ss_pred ccceEEEEEe-cChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhc-----CCCCCcccc-------cCCCC
Confidence 5678988774 444555567889999988 68877665543211111222211 3321 1111 11000
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCC---CcchHHHHHhcCCCcEEEecchHHHHHHHhhh
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTC---YPWTVDTAARFNIPRISFHGFSCFCLLCLYNL 161 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~---~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 161 (488)
. .... ........+.+++++ .+||+|++-.- .+++..+|..+|||++.+....
T Consensus 93 ------~--~~~~----~~~~~~~~l~~~l~~--~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl---------- 148 (403)
T 3ot5_A 93 ------Q--TLAE----ITSRVMNGINEVIAA--ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL---------- 148 (403)
T ss_dssp ------C--CHHH----HHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC----------
T ss_pred ------C--CHHH----HHHHHHHHHHHHHHH--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc----------
Confidence 0 1111 123345677788888 79999987332 2345788999999987642210
Q ss_pred cccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHh-hcC-CceEEe
Q 011339 162 HTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKK-TKG-GKVWCL 239 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~~-~~~~~v 239 (488)
........+| .+....... ...+.++..+ +...+.+.+ -.+ .++.++
T Consensus 149 ------------rs~~~~~~~p------------~~~~r~~~~--~~a~~~~~~s-----e~~~~~l~~~Gi~~~~i~vv 197 (403)
T 3ot5_A 149 ------------RTWNKYSPFP------------EEMNRQLTG--VMADIHFSPT-----KQAKENLLAEGKDPATIFVT 197 (403)
T ss_dssp ------------CCSCTTSSTT------------HHHHHHHHH--HHCSEEEESS-----HHHHHHHHHTTCCGGGEEEC
T ss_pred ------------cccccccCCc------------HHHHHHHHH--HhcCEEECCC-----HHHHHHHHHcCCCcccEEEe
Confidence 0000000011 111111111 1234445544 222222222 222 468889
Q ss_pred CCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhc-----CCCCeEEEEeC
Q 011339 240 GPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEA-----SKKPFIWVIRG 314 (488)
Q Consensus 240 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~v~~~~~ 314 (488)
|....+... ..... ....+..+.+ +++++++++.|....... .+..++++++. .+.++|+..+.
T Consensus 198 Gn~~~D~~~-----~~~~~--~~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~ 266 (403)
T 3ot5_A 198 GNTAIDALK-----TTVQK--DYHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHL 266 (403)
T ss_dssp CCHHHHHHH-----HHSCT--TCCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCS
T ss_pred CCchHHHHH-----hhhhh--hcchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCC
Confidence 853211000 00000 0011222223 355678787664322111 13444444432 23455554432
Q ss_pred CCCCchhhhhhhhhHHHHHHh-cCCCeEEecccc---hhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccch
Q 011339 315 GNNTSKEIQEWLLEEKFEERV-KGRGILILGWAP---QVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFW 390 (488)
Q Consensus 315 ~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~p---q~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~ 390 (488)
+. .+ -+.+.... ...++++.++++ ...+++.+++ +|+-.|. .+.||++.|+|+|++|-.++++.
T Consensus 267 ~~----~~-----~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e 334 (403)
T 3ot5_A 267 NP----AV-----REKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE 334 (403)
T ss_dssp CH----HH-----HHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH
T ss_pred CH----HH-----HHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh
Confidence 21 11 11111111 236888888886 3568888998 9988753 23699999999999976666553
Q ss_pred hHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccC
Q 011339 391 NEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEG 439 (488)
Q Consensus 391 na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~ 439 (488)
++ +.|.|..+. .++++|.+++.++++|+
T Consensus 335 ----~v-~~g~~~lv~----------------~d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 335 ----GI-EAGTLKLIG----------------TNKENLIKEALDLLDNK 362 (403)
T ss_dssp ----HH-HHTSEEECC----------------SCHHHHHHHHHHHHHCH
T ss_pred ----he-eCCcEEEcC----------------CCHHHHHHHHHHHHcCH
Confidence 33 677776552 37899999999999987
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.18 E-value=1.6e-09 Score=106.93 Aligned_cols=148 Identities=14% Similarity=0.140 Sum_probs=95.3
Q ss_pred EEEEeeCCccCCChHHHHHHHHHHhcCCC----Ce-EEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccch-hhh
Q 011339 278 VVYVCLGSICNLTSSQMIELGLGLEASKK----PF-IWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQ-VLI 351 (488)
Q Consensus 278 vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~~-v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq-~~l 351 (488)
.+++..|+... ......++++++.... .+ ++.++.+. ...+.+ .....-...|+.+.++..+ ..+
T Consensus 197 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--~~~~~~-----~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 197 NLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK--PRKFEA-----LAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp EEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--CHHHHH-----HHHHHTCGGGEEEESCCSCHHHH
T ss_pred eEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC--HHHHHH-----HHHHcCCCCcEEECCCcccHHHH
Confidence 56677787654 2234445666665422 23 33444432 222221 1111112468888888654 568
Q ss_pred hccCCcccccc----cCCchhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHH
Q 011339 352 LSHPSIGGFLT----HCSWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKED 427 (488)
Q Consensus 352 l~~~~~~~~It----hgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~ 427 (488)
+..+++ +|. -|..+++.||+++|+|+|+.+. ..+...+ +..+.|..++.. -+.++
T Consensus 268 ~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~--------------~~~~~ 326 (374)
T 2iw1_A 268 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEP--------------FSQEQ 326 (374)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSS--------------CCHHH
T ss_pred HHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCC--------------CCHHH
Confidence 888998 664 4556789999999999999765 4566777 588889888632 48999
Q ss_pred HHHHHHHHHccCcchHHHHHHHHHHHHH
Q 011339 428 VVKAINILMDEGGETDDRRKRAREFQIM 455 (488)
Q Consensus 428 l~~ai~~~l~~~~~~~~~~~~a~~l~~~ 455 (488)
+.++|.++++|++..+.+.+++++..+.
T Consensus 327 l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 327 LNEVLRKALTQSPLRMAWAENARHYADT 354 (374)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 9999999999885555566666555443
No 36
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.11 E-value=1.6e-08 Score=101.41 Aligned_cols=112 Identities=11% Similarity=0.030 Sum_probs=73.5
Q ss_pred CCCeEEecccc---h---hhhhccCCcccccccC----CchhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEec
Q 011339 337 GRGILILGWAP---Q---VLILSHPSIGGFLTHC----SWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIG 406 (488)
Q Consensus 337 ~~nv~~~~~~p---q---~~ll~~~~~~~~Ithg----G~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~ 406 (488)
.++|.+.+|++ + ..+++.+++ +|.-. ...++.||+++|+|+|+.+. ..+...+ +.-+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 46899988775 2 447788888 66543 34689999999999999775 3445555 3555666552
Q ss_pred ccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHc
Q 011339 407 VEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQDIMQ 479 (488)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~ 479 (488)
+.+++.++|.++++|++..+.+.+++++... +.-+....++++.+.+.+
T Consensus 365 -----------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 -----------------DANEAVEVVLYLLKHPEVSKEMGAKAKERVR-------KNFIITKHMERYLDILNS 413 (416)
T ss_dssp -----------------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-------HHTBHHHHHHHHHHHHHT
T ss_pred -----------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHH
Confidence 5789999999999987444444444444322 233444555666555543
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.10 E-value=2.4e-09 Score=104.53 Aligned_cols=125 Identities=10% Similarity=0.101 Sum_probs=78.8
Q ss_pred EEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchh---hhhccC
Q 011339 279 VYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQV---LILSHP 355 (488)
Q Consensus 279 V~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~---~ll~~~ 355 (488)
+++..|+... ......++++++..+.++++ ++.+. ....+.+ +..... +|+.+.+|+++. .++..+
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i-~G~g~-~~~~l~~------~~~~~~-~~v~~~g~~~~~~l~~~~~~a 232 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVL-AGPAW-EPEYFDE------ITRRYG-STVEPIGEVGGERRLDLLASA 232 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEE-ESCCC-CHHHHHH------HHHHHT-TTEEECCCCCHHHHHHHHHHC
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEE-EeCcc-cHHHHHH------HHHHhC-CCEEEeccCCHHHHHHHHHhC
Confidence 3455676653 33345566666666666544 44433 2222221 212222 799999999875 688888
Q ss_pred Cccccc--cc-----------CCc-hhHHHHhhcCCCEeecCcccccchhHHHHHHH--hcceEEecccCCCCCCccccc
Q 011339 356 SIGGFL--TH-----------CSW-NSSLEGISAGVPLITWPLYGDQFWNEKLIVQV--LNIGVRIGVEVPLDFGEEEEI 419 (488)
Q Consensus 356 ~~~~~I--th-----------gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~--~G~G~~l~~~~~~~~~~~~~~ 419 (488)
++ +| +. -|. +++.||+++|+|+|+... ..+...+ +. -+.|..+ .
T Consensus 233 dv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~--~----------- 292 (342)
T 2iuy_A 233 HA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT--D----------- 292 (342)
T ss_dssp SE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS--C-----------
T ss_pred CE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc--C-----------
Confidence 88 65 32 343 689999999999999876 3355555 34 3345433 2
Q ss_pred ccccCHHHHHHHHHHHHc
Q 011339 420 GVLVKKEDVVKAINILMD 437 (488)
Q Consensus 420 ~~~~~~~~l~~ai~~~l~ 437 (488)
. +.+++.++|.++++
T Consensus 293 --~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 --F-APDEARRTLAGLPA 307 (342)
T ss_dssp --C-CHHHHHHHHHTSCC
T ss_pred --C-CHHHHHHHHHHHHH
Confidence 4 88999999999986
No 38
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.07 E-value=7e-08 Score=95.17 Aligned_cols=322 Identities=12% Similarity=0.052 Sum_probs=163.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC-C-CeEEEEeCCcchhhhHHHHHhhhcCCCCeEE-EEeeCCccccCCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH-G-AAITIVTTPANAARFKTVVARAMQSGLPLQL-IEIQFPYQEAGVPEGC 84 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r-G-H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~l~~~~ 84 (488)
++|||++++ ++.++......++++|+++ | |+|+++++....+......... ++.. +.++ +..
T Consensus 7 ~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-------~~~-- 71 (375)
T 3beo_A 7 ERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIF-----GITPDFDLN-------IMK-- 71 (375)
T ss_dssp SCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHH-----TCCCSEECC-------CCC--
T ss_pred cCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHc-----CCCCccccc-------cCC--
Confidence 568999997 4477788888999999987 5 8888777654322222221111 2221 1111 000
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCc---chHHHHHhcCCCcEEEecchHHHHHHHhhh
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYP---WTVDTAARFNIPRISFHGFSCFCLLCLYNL 161 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~---~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 161 (488)
+........ ......+.++++. .+||+|++....+ .+..++...|+|++.+.... .
T Consensus 72 ------~~~~~~~~~----~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~--~------- 130 (375)
T 3beo_A 72 ------DRQTLIDIT----TRGLEGLDKVMKE--AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL--R------- 130 (375)
T ss_dssp ------TTCCHHHHH----HHHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC--C-------
T ss_pred ------CcccHHHHH----HHHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc--c-------
Confidence 000111111 1224456677777 7999999854322 23457788999988642110 0
Q ss_pred cccccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHh-hcC-CceEEe
Q 011339 162 HTSTVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKK-TKG-GKVWCL 239 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~~-~~~~~v 239 (488)
....+ ..+ .....+.+. .+..+.++..+-... +.+.+ ..+ .++..+
T Consensus 131 ------------~~~~~-~~~------------~~~~~~~~~--~~~~d~ii~~s~~~~-----~~~~~~g~~~~~i~vi 178 (375)
T 3beo_A 131 ------------TWDKY-SPY------------PEEMNRQLT--GVMADLHFSPTAKSA-----TNLQKENKDESRIFIT 178 (375)
T ss_dssp ------------CSCTT-SST------------THHHHHHHH--HHHCSEEEESSHHHH-----HHHHHTTCCGGGEEEC
T ss_pred ------------ccccc-CCC------------hhHhhhhHH--hhhhheeeCCCHHHH-----HHHHHcCCCcccEEEE
Confidence 00000 000 011111111 122566666553221 12222 122 357777
Q ss_pred CCCCCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcC---CCCeEEEEeCCC
Q 011339 240 GPVSLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEAS---KKPFIWVIRGGN 316 (488)
Q Consensus 240 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~v~~~~~~~ 316 (488)
|....+.. . .... .....++.+.+ +++++|+++.|...... ..+..++++++.. ...+.+.++.+.
T Consensus 179 ~n~~~d~~-~----~~~~--~~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~ 247 (375)
T 3beo_A 179 GNTAIDAL-K----TTVK--ETYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHM 247 (375)
T ss_dssp CCHHHHHH-H----HHCC--SSCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCS
T ss_pred CChhHhhh-h----hhhh--hhhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCC
Confidence 74311100 0 0000 00011222212 24557777888755321 2234455555422 112223333332
Q ss_pred CCchhhhhhhhhHHHHHHhc-CCCeEEecccch---hhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhH
Q 011339 317 NTSKEIQEWLLEEKFEERVK-GRGILILGWAPQ---VLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNE 392 (488)
Q Consensus 317 ~~~~~~~~~~~p~~~~~~~~-~~nv~~~~~~pq---~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na 392 (488)
. ..+ -+.+..... .+++++.+++++ ..+++.+++ +|+..| +.+.||+++|+|+|+....+..
T Consensus 248 -~-~~~-----~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---- 313 (375)
T 3beo_A 248 -N-PVV-----RETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---- 313 (375)
T ss_dssp -C-HHH-----HHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----
T ss_pred -C-HHH-----HHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----
Confidence 1 111 111222212 368988777654 467888888 888763 5588999999999998543332
Q ss_pred HHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccC
Q 011339 393 KLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEG 439 (488)
Q Consensus 393 ~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~ 439 (488)
..+. ..|.|..++ .++++|.++|.++++|+
T Consensus 314 ~e~v-~~g~g~~v~----------------~d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 314 PEGI-EAGTLKLAG----------------TDEETIFSLADELLSDK 343 (375)
T ss_dssp HHHH-HTTSEEECC----------------SCHHHHHHHHHHHHHCH
T ss_pred ceee-cCCceEEcC----------------CCHHHHHHHHHHHHhCh
Confidence 2343 567776653 37899999999999987
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.94 E-value=1.8e-08 Score=99.90 Aligned_cols=325 Identities=15% Similarity=0.089 Sum_probs=167.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchh-hhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCcc
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAA-RFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCEN 86 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~ 86 (488)
-|+||+++. |+.-.+.=+.+|.++|.++ +++.++.+....+ .+..... .+.++ +.|... +..+
T Consensus 8 ~~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~~~~i-----~~~~~~--l~~~--- 71 (385)
T 4hwg_A 8 HMLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----DDMGI-----RKPDYF--LEVA--- 71 (385)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C-CCC-----CCCSEE--CCCC---
T ss_pred hhhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----hhCCC-----CCCcee--cCCC---
Confidence 578887765 4666666677777788777 8887776654333 2322211 11122 111111 1111
Q ss_pred ccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcC--CCcchHHHHHhcCCCcEEEecchHHHHHHHhhhccc
Q 011339 87 FDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDT--CYPWTVDTAARFNIPRISFHGFSCFCLLCLYNLHTS 164 (488)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~--~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 164 (488)
.. .. ..........+.+++++ .+||+|++-. ...++..+|..+|||++.+....
T Consensus 72 --~~---~~----~~~~~~~~~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl------------- 127 (385)
T 4hwg_A 72 --AD---NT----AKSIGLVIEKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN------------- 127 (385)
T ss_dssp --CC---CS----HHHHHHHHHHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-------------
T ss_pred --CC---CH----HHHHHHHHHHHHHHHHh--cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-------------
Confidence 00 11 11222346677788888 7999998633 33345889999999977642210
Q ss_pred ccccccCCCCCccccCCCCCccccccccchHHHHHHHHHhhccccceEEEcCchhhhHHHHHHHHh-hcC-CceEEeCCC
Q 011339 165 TVQENVTSNSDYLVVPGLPDQIEMTKVREKWKDFGEMVLAADMKSYGIIINTFEELELEYVKECKK-TKG-GKVWCLGPV 242 (488)
Q Consensus 165 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~~-~~~~~vGpl 242 (488)
. .... .+|. +..+.+.. .-++.++..+- ...+.+.+ -.+ .+++++|-.
T Consensus 128 ------r--s~~~---~~pe------------e~nR~~~~--~~a~~~~~~te-----~~~~~l~~~G~~~~~I~vtGnp 177 (385)
T 4hwg_A 128 ------R--CFDQ---RVPE------------EINRKIID--HISDVNITLTE-----HARRYLIAEGLPAELTFKSGSH 177 (385)
T ss_dssp ------C--CSCT---TSTH------------HHHHHHHH--HHCSEEEESSH-----HHHHHHHHTTCCGGGEEECCCS
T ss_pred ------c--cccc---cCcH------------HHHHHHHH--hhhceeecCCH-----HHHHHHHHcCCCcCcEEEECCc
Confidence 0 0000 0111 11111111 12344444442 12222222 222 468899943
Q ss_pred CCCCCCcchhhhhCCCCcccchhhhcccCCCCCCeEEEEeeCCccCCC-hHHHHHHHHHHhcC----CCCeEEEEeCCCC
Q 011339 243 SLCNKQDIDKAERGKKAAVDISECLNWLDSWPPNSVVYVCLGSICNLT-SSQMIELGLGLEAS----KKPFIWVIRGGNN 317 (488)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~v~~~~~~~~ 317 (488)
..+.-..... . ....++.+.+.-. +++.|+++.|...... .+.+..+++++... +..+|+......
T Consensus 178 ~~D~~~~~~~--~-----~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~- 248 (385)
T 4hwg_A 178 MPEVLDRFMP--K-----ILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT- 248 (385)
T ss_dssp HHHHHHHHHH--H-----HHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH-
T ss_pred hHHHHHHhhh--h-----cchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH-
Confidence 2211000000 0 0112233333322 2458889988765433 24455666666532 456666543211
Q ss_pred CchhhhhhhhhHHHHHHhcCCCeEEeccc---chhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhHHH
Q 011339 318 TSKEIQEWLLEEKFEERVKGRGILILGWA---PQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNEKL 394 (488)
Q Consensus 318 ~~~~~~~~~~p~~~~~~~~~~nv~~~~~~---pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na~r 394 (488)
...+.+ +. ++ ....+|+++.+.+ +...+++.+++ +|+-.|. .+.||.+.|+|+|.++-..+-+.
T Consensus 249 -~~~l~~--~~-~~--~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---- 315 (385)
T 4hwg_A 249 -KKRLED--LE-GF--KELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---- 315 (385)
T ss_dssp -HHHHHT--SG-GG--GGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----
T ss_pred -HHHHHH--HH-HH--hcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----
Confidence 111111 00 00 0013578776554 44578999999 9998775 46899999999999987554222
Q ss_pred HHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHccCcc
Q 011339 395 IVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGE 441 (488)
Q Consensus 395 v~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~ 441 (488)
.+ +.|.++.+. .++++|.+++.++++|+..
T Consensus 316 ~v-~~G~~~lv~----------------~d~~~i~~ai~~ll~d~~~ 345 (385)
T 4hwg_A 316 GM-DAGTLIMSG----------------FKAERVLQAVKTITEEHDN 345 (385)
T ss_dssp HH-HHTCCEECC----------------SSHHHHHHHHHHHHTTCBT
T ss_pred hh-hcCceEEcC----------------CCHHHHHHHHHHHHhChHH
Confidence 23 667665552 4789999999999998743
No 40
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.75 E-value=1.4e-06 Score=89.03 Aligned_cols=110 Identities=11% Similarity=-0.014 Sum_probs=69.4
Q ss_pred CCeE-Eecccch--hhhhccCCccccccc----CCchhHHHHhhcCCCEeecCcccccchhHHHHHHHh---------cc
Q 011339 338 RGIL-ILGWAPQ--VLILSHPSIGGFLTH----CSWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVL---------NI 401 (488)
Q Consensus 338 ~nv~-~~~~~pq--~~ll~~~~~~~~Ith----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~---------G~ 401 (488)
.++. +.++... ..+++.+++ +|.- |.-.++.||+++|+|+|+... ......+ +.- +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccc
Confidence 5775 6777433 357888888 6632 334688999999999999865 2344444 233 56
Q ss_pred eEEecccCCCCCCcccccccccCHHHHHHHHHHHH---ccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 011339 402 GVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILM---DEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQDIM 478 (488)
Q Consensus 402 G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l---~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~ 478 (488)
|..++. -++++++++|.+++ +|++..+.+.+++ + ++.-+....++++.+...
T Consensus 420 G~l~~~---------------~d~~~la~~i~~ll~~~~~~~~~~~~~~~~-------~---~~~fs~~~~~~~~~~ly~ 474 (485)
T 2qzs_A 420 GFVFED---------------SNAWSLLRAIRRAFVLWSRPSLWRFVQRQA-------M---AMDFSWQVAAKSYRELYY 474 (485)
T ss_dssp BEEECS---------------SSHHHHHHHHHHHHHHHTSHHHHHHHHHHH-------H---HCCCCHHHHHHHHHHHHH
T ss_pred eEEECC---------------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHH-------H---hhcCCHHHHHHHHHHHHH
Confidence 777754 48899999999999 6663222232222 2 234555566666655544
Q ss_pred c
Q 011339 479 Q 479 (488)
Q Consensus 479 ~ 479 (488)
+
T Consensus 475 ~ 475 (485)
T 2qzs_A 475 R 475 (485)
T ss_dssp H
T ss_pred H
Confidence 4
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.72 E-value=2.1e-06 Score=87.80 Aligned_cols=80 Identities=11% Similarity=0.039 Sum_probs=56.6
Q ss_pred CCeE-Eecccch--hhhhccCCccccccc----CCchhHHHHhhcCCCEeecCcccccchhHHHHHHHh---------cc
Q 011339 338 RGIL-ILGWAPQ--VLILSHPSIGGFLTH----CSWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVL---------NI 401 (488)
Q Consensus 338 ~nv~-~~~~~pq--~~ll~~~~~~~~Ith----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~---------G~ 401 (488)
.++. +.++... ..++..+++ +|.- |--.++.||+++|+|+|+... ......+ +.- +.
T Consensus 346 ~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~ 418 (485)
T 1rzu_A 346 GRVGVAIGYNEPLSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAAT 418 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCC
T ss_pred CcEEEecCCCHHHHHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCc
Confidence 6786 6777333 257888888 6632 334689999999999999765 2344444 233 56
Q ss_pred eEEecccCCCCCCcccccccccCHHHHHHHHHHHH---ccC
Q 011339 402 GVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILM---DEG 439 (488)
Q Consensus 402 G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l---~~~ 439 (488)
|..++. -+.++++++|.+++ +|+
T Consensus 419 G~l~~~---------------~d~~~la~~i~~ll~~~~~~ 444 (485)
T 1rzu_A 419 GVQFSP---------------VTLDGLKQAIRRTVRYYHDP 444 (485)
T ss_dssp BEEESS---------------CSHHHHHHHHHHHHHHHTCH
T ss_pred ceEeCC---------------CCHHHHHHHHHHHHHHhCCH
Confidence 777754 48899999999999 666
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.70 E-value=2.8e-05 Score=81.15 Aligned_cols=95 Identities=14% Similarity=0.126 Sum_probs=64.8
Q ss_pred CCeEEecccchh---hhhccCCccccc--c-cCCchhHHHHhhcCCCEeecCcccccc-hhHHHHHHHhcceEEecccCC
Q 011339 338 RGILILGWAPQV---LILSHPSIGGFL--T-HCSWNSSLEGISAGVPLITWPLYGDQF-WNEKLIVQVLNIGVRIGVEVP 410 (488)
Q Consensus 338 ~nv~~~~~~pq~---~ll~~~~~~~~I--t-hgG~gs~~eal~~GvP~v~~P~~~DQ~-~na~rv~e~~G~G~~l~~~~~ 410 (488)
.+|++.+++|+. .++..+++ || + .|+..++.||+++|+|+|++|-..=.. ..+..+ +..|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc----
Confidence 689999999754 46788888 65 2 255678999999999999987431111 123445 4666665442
Q ss_pred CCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHH
Q 011339 411 LDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRARE 451 (488)
Q Consensus 411 ~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~ 451 (488)
-+++++.+++.++++|++..+.+++++++
T Consensus 507 ------------~~~~~la~~i~~l~~~~~~~~~~~~~~~~ 535 (568)
T 2vsy_A 507 ------------ADDAAFVAKAVALASDPAALTALHARVDV 535 (568)
T ss_dssp ------------SSHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 27899999999999988444444444443
No 43
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.66 E-value=3.9e-06 Score=90.39 Aligned_cols=93 Identities=10% Similarity=0.093 Sum_probs=61.7
Q ss_pred CCCeEEec----ccchhhhhc----cCCccccccc---CC-chhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEE
Q 011339 337 GRGILILG----WAPQVLILS----HPSIGGFLTH---CS-WNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVR 404 (488)
Q Consensus 337 ~~nv~~~~----~~pq~~ll~----~~~~~~~Ith---gG-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~ 404 (488)
.++|.+.+ ++|+.++.. .+++ ||.- -| ..++.||+++|+|+|+.. -......+ +.-+.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV-~dg~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEII-VHGKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHC-CBTTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHH-ccCCcEEE
Confidence 46788877 445555554 4556 6632 23 368999999999999964 34455555 35567877
Q ss_pred ecccCCCCCCcccccccccCHHHHHHHHHHHH----ccCcchHHHHHHHHH
Q 011339 405 IGVEVPLDFGEEEEIGVLVKKEDVVKAINILM----DEGGETDDRRKRARE 451 (488)
Q Consensus 405 l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l----~~~~~~~~~~~~a~~ 451 (488)
++. -++++++++|.+++ .|++..+.+.+++++
T Consensus 712 v~p---------------~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~ 747 (816)
T 3s28_A 712 IDP---------------YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQ 747 (816)
T ss_dssp ECT---------------TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHH
T ss_pred eCC---------------CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 765 37889999997766 788544445444444
No 44
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.64 E-value=1.3e-05 Score=79.07 Aligned_cols=98 Identities=12% Similarity=0.133 Sum_probs=71.9
Q ss_pred CeEEecccch-hhhhccCCcccccc---c--CCchhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCC
Q 011339 339 GILILGWAPQ-VLILSHPSIGGFLT---H--CSWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLD 412 (488)
Q Consensus 339 nv~~~~~~pq-~~ll~~~~~~~~It---h--gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~ 412 (488)
++++.++..+ ..+++.+++ ++. . +|..++.||+++|+|+|+-|..++.......+ ...|.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe-------
Confidence 4555554433 558888887 553 1 23478999999999999877767666666665 366766544
Q ss_pred CCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHH
Q 011339 413 FGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAK 457 (488)
Q Consensus 413 ~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~ 457 (488)
-++++|.++|.++++| +..+.+.+++++..+.-.
T Consensus 331 ----------~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 331 ----------KNETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp ----------CSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 2678999999999999 888899999988776644
No 45
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.56 E-value=5.9e-06 Score=82.43 Aligned_cols=87 Identities=16% Similarity=0.226 Sum_probs=56.2
Q ss_pred eEEecccchh---hhhccCCcccccc--c--CCchhHHHHhhcCCCEeecCcccccchhHHHHHHHhcc-----------
Q 011339 340 ILILGWAPQV---LILSHPSIGGFLT--H--CSWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNI----------- 401 (488)
Q Consensus 340 v~~~~~~pq~---~ll~~~~~~~~It--h--gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~----------- 401 (488)
+++.+|+|+. .++..+++ +|. . |...++.||+++|+|+|+.... .....+ .-|.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v--~~~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF--SGDCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS--CTTTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH--ccCcccccccccccc
Confidence 6677899854 46788888 663 2 2335899999999999996642 333333 2222
Q ss_pred -----eE--EecccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHH
Q 011339 402 -----GV--RIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAR 450 (488)
Q Consensus 402 -----G~--~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~ 450 (488)
|. .++. -+.+++.++| ++++|++..+.+.++++
T Consensus 328 ~~~~~G~~gl~~~---------------~d~~~la~~i-~l~~~~~~~~~~~~~a~ 367 (413)
T 3oy2_A 328 VDDRDGIGGIEGI---------------IDVDDLVEAF-TFFKDEKNRKEYGKRVQ 367 (413)
T ss_dssp CTTTCSSCCEEEE---------------CCHHHHHHHH-HHTTSHHHHHHHHHHHH
T ss_pred cccccCcceeeCC---------------CCHHHHHHHH-HHhcCHHHHHHHHHHHH
Confidence 33 4432 4899999999 99998743333333333
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.36 E-value=4.3e-06 Score=73.11 Aligned_cols=132 Identities=9% Similarity=0.111 Sum_probs=85.9
Q ss_pred EEEeeCCccCCChHHHHHHHHHHhcC-CCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccch---hhhhcc
Q 011339 279 VYVCLGSICNLTSSQMIELGLGLEAS-KKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQ---VLILSH 354 (488)
Q Consensus 279 V~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq---~~ll~~ 354 (488)
+++..|+... ...+..++++++.. +.++++ ++... ....+.+ +-..+ ......|+.+.+|+++ ..++..
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i-~G~~~-~~~~l~~--~~~~~-~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYI-VGWFS-KGDHAER--YARKI-MKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEE-EBCCC-TTSTHHH--HHHHH-HHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEE-EecCc-cHHHHHH--HHHhh-hcccCCcEEEeCCCCHHHHHHHHHh
Confidence 4466677653 33355667777666 445444 44433 2223222 11100 1122569999999997 568888
Q ss_pred CCcccccc---cCCc-hhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHH
Q 011339 355 PSIGGFLT---HCSW-NSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVK 430 (488)
Q Consensus 355 ~~~~~~It---hgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 430 (488)
+++ +|. +.|+ .++.||+++|+|+|+... ..+...+ +..+.|..+ . -+.+++.+
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~---------------~d~~~l~~ 154 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N---------------ADVNEIID 154 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C---------------SCHHHHHH
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C---------------CCHHHHHH
Confidence 998 665 3444 489999999999999764 4555556 456678777 3 48999999
Q ss_pred HHHHHHccCc
Q 011339 431 AINILMDEGG 440 (488)
Q Consensus 431 ai~~~l~~~~ 440 (488)
+|.++++|++
T Consensus 155 ~i~~l~~~~~ 164 (177)
T 2f9f_A 155 AMKKVSKNPD 164 (177)
T ss_dssp HHHHHHHCTT
T ss_pred HHHHHHhCHH
Confidence 9999999884
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.33 E-value=7.2e-05 Score=74.57 Aligned_cols=75 Identities=11% Similarity=0.059 Sum_probs=57.5
Q ss_pred CCCeEEecccchh---hhhccCCcccccc---cCCc-hhHHHHh-------hcCCCEeecCcccccchhHHHHHHHhcce
Q 011339 337 GRGILILGWAPQV---LILSHPSIGGFLT---HCSW-NSSLEGI-------SAGVPLITWPLYGDQFWNEKLIVQVLNIG 402 (488)
Q Consensus 337 ~~nv~~~~~~pq~---~ll~~~~~~~~It---hgG~-gs~~eal-------~~GvP~v~~P~~~DQ~~na~rv~e~~G~G 402 (488)
.+||.+.+++|+. .+++.+++ +|. +-|. +++.||+ ++|+|+|+... + +.-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 4689999999864 46788888 553 3344 5788999 99999999765 5 354457
Q ss_pred EE-ecccCCCCCCcccccccccCHHHHHHHHHHHHccC
Q 011339 403 VR-IGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDEG 439 (488)
Q Consensus 403 ~~-l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~ 439 (488)
.. ++. -++++|+++|.++++|+
T Consensus 331 ~l~v~~---------------~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYTP---------------GNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEECT---------------TCHHHHHHHHHHHHHCC
T ss_pred EEEeCC---------------CCHHHHHHHHHHHHhCc
Confidence 66 554 48899999999999987
No 48
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.06 E-value=0.00021 Score=71.33 Aligned_cols=79 Identities=20% Similarity=0.097 Sum_probs=56.5
Q ss_pred CCeEEecccchh---hhhccCCcccccc--c-CCc-hhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCC
Q 011339 338 RGILILGWAPQV---LILSHPSIGGFLT--H-CSW-NSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVP 410 (488)
Q Consensus 338 ~nv~~~~~~pq~---~ll~~~~~~~~It--h-gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~ 410 (488)
.++.+.+++|+. .++..+++ ||. . =|. .++.||+++|+|+|+ -..+ ....+ +.-..|..++.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCC---
Confidence 478888999765 46788888 664 2 244 478999999999998 3222 22334 34345776654
Q ss_pred CCCCcccccccccCHHHHHHHHHHHHccC
Q 011339 411 LDFGEEEEIGVLVKKEDVVKAINILMDEG 439 (488)
Q Consensus 411 ~~~~~~~~~~~~~~~~~l~~ai~~~l~~~ 439 (488)
-++++|+++|.++++|+
T Consensus 364 ------------~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 364 ------------LNPENIAETLVELCMSF 380 (413)
T ss_dssp ------------CSHHHHHHHHHHHHHHT
T ss_pred ------------CCHHHHHHHHHHHHcCH
Confidence 48999999999999988
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.86 E-value=0.00015 Score=62.17 Aligned_cols=143 Identities=15% Similarity=0.180 Sum_probs=82.8
Q ss_pred eEEEEeeCCccCCChHHHHHHHHHHhcCC--CCeEEE-EeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchh---h
Q 011339 277 SVVYVCLGSICNLTSSQMIELGLGLEASK--KPFIWV-IRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQV---L 350 (488)
Q Consensus 277 ~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~--~~~v~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~---~ 350 (488)
+++++..|++.. ......++++++... ..+-+. ++.+. ....+.+ +.... ..++.+ +|+|+. .
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~~~~------~~~~~-~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP-DEKKIKL------LAQKL-GVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST-THHHHHH------HHHHH-TCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc-cHHHHHH------HHHHc-CCeEEE-eecCHHHHHH
Confidence 467788888755 223445556665542 233333 44333 2222111 11111 237788 999864 4
Q ss_pred hhccCCcccccc----cCCchhHHHHhhcCC-CEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCH
Q 011339 351 ILSHPSIGGFLT----HCSWNSSLEGISAGV-PLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKK 425 (488)
Q Consensus 351 ll~~~~~~~~It----hgG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~ 425 (488)
++..+++ +|. -|...++.||+++|+ |+|+.... ......+ +..+. .++. -+.
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~-~~~~~--~~~~---------------~~~ 127 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFA-LDERS--LFEP---------------NNA 127 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGC-SSGGG--EECT---------------TCH
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---Cchhhhc-cCCce--EEcC---------------CCH
Confidence 6778888 664 233469999999996 99994322 1222222 23222 2332 589
Q ss_pred HHHHHHHHHHHccCcchHHHHHHHHHHH
Q 011339 426 EDVVKAINILMDEGGETDDRRKRAREFQ 453 (488)
Q Consensus 426 ~~l~~ai~~~l~~~~~~~~~~~~a~~l~ 453 (488)
+++.++|.++++|++..+.+.+++++..
T Consensus 128 ~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 128 KDLSAKIDWWLENKLERERMQNEYAKSA 155 (166)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 9999999999998865556666666644
No 50
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.71 E-value=0.0096 Score=61.32 Aligned_cols=176 Identities=10% Similarity=0.030 Sum_probs=87.0
Q ss_pred CCCeEEEEeeCCccC-CChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHH--HhcCCCeEEecccchh-
Q 011339 274 PPNSVVYVCLGSICN-LTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEE--RVKGRGILILGWAPQV- 349 (488)
Q Consensus 274 ~~~~vV~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~nv~~~~~~pq~- 349 (488)
++.|+| +..|.+.. ...+.+...+..+...+.++++...+.. . ....+.. .....++.+..+.+..
T Consensus 325 ~~~p~i-~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~----~-----~~~~~~~~~~~~~~~v~~~~~~~~~~ 394 (536)
T 3vue_A 325 RKIPLI-AFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK----K-----FEKLLKSMEEKYPGKVRAVVKFNAPL 394 (536)
T ss_dssp TTSCEE-EEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH----H-----HHHHHHHHHHHSTTTEEEECSCCHHH
T ss_pred CCCcEE-EEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc----h-----HHHHHHHHHhhcCCceEEEEeccHHH
Confidence 345454 55666654 2233333333333344556555443332 1 1111111 1235677777766653
Q ss_pred --hhhccCCccccccc---CCc-hhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCccccccccc
Q 011339 350 --LILSHPSIGGFLTH---CSW-NSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLV 423 (488)
Q Consensus 350 --~ll~~~~~~~~Ith---gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~ 423 (488)
.+++.+++ ||.- =|. .+++||+++|+|+|+.... .....+ +.-.-|.......... .--...
T Consensus 395 ~~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~~g-----~l~~~~ 462 (536)
T 3vue_A 395 AHLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSVDC-----KVVEPS 462 (536)
T ss_dssp HHHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCSCT-----TCCCHH
T ss_pred HHHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCCce-----eEECCC
Confidence 46778887 6642 233 4889999999999997653 233333 2322333222110000 000124
Q ss_pred CHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHc
Q 011339 424 KKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQDIMQ 479 (488)
Q Consensus 424 ~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~ 479 (488)
+.+.|.++|+++++..+. +. ++++.++++++--|-...+++..+...+
T Consensus 463 d~~~la~ai~ral~~~~~-~~-------~~~~~~~am~~~fSW~~~A~~y~~ly~~ 510 (536)
T 3vue_A 463 DVKKVAATLKRAIKVVGT-PA-------YEEMVRNCMNQDLSWKGPAKNWENVLLG 510 (536)
T ss_dssp HHHHHHHHHHHHHHHTTS-HH-------HHHHHHHHHHSCCSSHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCc-HH-------HHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 678899999988752110 12 2333344455445555555555554443
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.55 E-value=0.00095 Score=68.81 Aligned_cols=153 Identities=14% Similarity=0.078 Sum_probs=96.6
Q ss_pred CeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEE--eCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhh---
Q 011339 276 NSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVI--RGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVL--- 350 (488)
Q Consensus 276 ~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~--- 350 (488)
+.++|.|++......++.+....+.+++.+..++|.. +... ... .. +-..+...--.+.+++.+++|+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~-g~~--~~--~~~~~~~~GI~~Rv~F~g~~p~~e~la 514 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN-GIT--HP--YVERFIKSYLGDSATAHPHSPYHQYLR 514 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC-GGG--HH--HHHHHHHHHHGGGEEEECCCCHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc-hhh--HH--HHHHHHHcCCCccEEEcCCCCHHHHHH
Confidence 3689999999888889998888888888887777753 3221 000 00 111111111125778888888655
Q ss_pred hhccCCcccccc---cCCchhHHHHhhcCCCEeecCccc-ccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHH
Q 011339 351 ILSHPSIGGFLT---HCSWNSSLEGISAGVPLITWPLYG-DQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKE 426 (488)
Q Consensus 351 ll~~~~~~~~It---hgG~gs~~eal~~GvP~v~~P~~~-DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~ 426 (488)
.+..+++ |+. .+|..|++|||+.|||+|+.+-.. -...-+..+ ...|+...+- . -+.+
T Consensus 515 ~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LI-A--------------~d~e 576 (631)
T 3q3e_A 515 ILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLI-A--------------NTVD 576 (631)
T ss_dssp HHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGE-E--------------SSHH
T ss_pred HHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCccee-c--------------CCHH
Confidence 4467777 543 377899999999999999987532 111222334 3566654211 1 4788
Q ss_pred HHHHHHHHHHccCcchHHHHHHHHH
Q 011339 427 DVVKAINILMDEGGETDDRRKRARE 451 (488)
Q Consensus 427 ~l~~ai~~~l~~~~~~~~~~~~a~~ 451 (488)
+..+...++.+|++....+|++++.
T Consensus 577 eYv~~Av~La~D~~~l~~LR~~Lr~ 601 (631)
T 3q3e_A 577 EYVERAVRLAENHQERLELRRYIIE 601 (631)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 8888888999998544445444443
No 52
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.47 E-value=0.0015 Score=69.90 Aligned_cols=151 Identities=13% Similarity=0.148 Sum_probs=100.4
Q ss_pred CCCeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHH-HhcCCCeEEecccchhh--
Q 011339 274 PPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEE-RVKGRGILILGWAPQVL-- 350 (488)
Q Consensus 274 ~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~nv~~~~~~pq~~-- 350 (488)
++..+||.||-.....+++.+..-.+.+++.+.-++|........... +-..+.. -..+..+++.+..|..+
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~-----l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPN-----IQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHH-----HHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH-----HHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 355699999998888999999999999999999999988765401111 1111111 12346788888887654
Q ss_pred -hhccCCcccccc---cCCchhHHHHhhcCCCEeecCcc-cccchhHHHHHHHhcceEEecccCCCCCCcccccccccCH
Q 011339 351 -ILSHPSIGGFLT---HCSWNSSLEGISAGVPLITWPLY-GDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKK 425 (488)
Q Consensus 351 -ll~~~~~~~~It---hgG~gs~~eal~~GvP~v~~P~~-~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~ 425 (488)
.+..+|+ ++. .+|.+|++|||..|||+|.++-. .=...-+..+ ...|+...+ .-+.
T Consensus 595 ~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~i----------------a~~~ 655 (723)
T 4gyw_A 595 RRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELI----------------AKNR 655 (723)
T ss_dssp HHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGB----------------CSSH
T ss_pred HHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccc----------------cCCH
Confidence 4455665 765 88999999999999999999942 1223344455 477776544 2567
Q ss_pred HHHHHHHHHHHccCcchHHHHHH
Q 011339 426 EDVVKAINILMDEGGETDDRRKR 448 (488)
Q Consensus 426 ~~l~~ai~~~l~~~~~~~~~~~~ 448 (488)
++-.+...++-+|++....+|++
T Consensus 656 ~~Y~~~a~~la~d~~~l~~lr~~ 678 (723)
T 4gyw_A 656 QEYEDIAVKLGTDLEYLKKVRGK 678 (723)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHH
Confidence 77666666777777433333333
No 53
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.47 E-value=0.0019 Score=56.92 Aligned_cols=92 Identities=10% Similarity=0.096 Sum_probs=64.0
Q ss_pred CeEE-ecccch---hhhhccCCcccccccC---C-chhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCC
Q 011339 339 GILI-LGWAPQ---VLILSHPSIGGFLTHC---S-WNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVP 410 (488)
Q Consensus 339 nv~~-~~~~pq---~~ll~~~~~~~~Ithg---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~ 410 (488)
++.+ .+++++ ..++..+++ +|.-. | ..++.||+++|+|+|+.... .+...+ ..+.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEecC---
Confidence 8998 999985 457888888 66422 3 36889999999999987652 222222 2345666654
Q ss_pred CCCCcccccccccCHHHHHHHHHHHHc-cCcchHHHHHHHHHHH
Q 011339 411 LDFGEEEEIGVLVKKEDVVKAINILMD-EGGETDDRRKRAREFQ 453 (488)
Q Consensus 411 ~~~~~~~~~~~~~~~~~l~~ai~~~l~-~~~~~~~~~~~a~~l~ 453 (488)
-+.+++.++|.++++ |++..+.+.+++++..
T Consensus 165 ------------~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~ 196 (200)
T 2bfw_A 165 ------------GDPGELANAILKALELSRSDLSKFRENCKKRA 196 (200)
T ss_dssp ------------TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 488999999999999 8855555555555443
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.12 E-value=0.012 Score=56.72 Aligned_cols=103 Identities=13% Similarity=0.001 Sum_probs=66.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCcchhhhHHHHHhhhcCCCCe-EEEEeeCCccccCCCCCCcc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTPANAARFKTVVARAMQSGLPL-QLIEIQFPYQEAGVPEGCEN 86 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~l~~~~~~ 86 (488)
|||+++.....|++.-+.++.++|+++ +.+|++++.+.+.+.++. .+.+ +++.++. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~--------~p~i~~v~~~~~-------~~~--- 62 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR--------MPEVNEAIPMPL-------GHG--- 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT--------CTTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--------CCccCEEEEecC-------Ccc---
Confidence 689999999999999999999999997 999999999866554332 1234 2333320 000
Q ss_pred ccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEE
Q 011339 87 FDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRIS 146 (488)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~ 146 (488)
. ..+ .....+...++. .+||++|.-....-...++...|+|...
T Consensus 63 ----~--~~~--------~~~~~l~~~l~~--~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 63 ----A--LEI--------GERRKLGHSLRE--KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CH--------HHHHHHHHHTTT--TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ----c--cch--------HHHHHHHHHHHh--cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 000 011234445555 6899999333334566778888999743
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.95 E-value=0.027 Score=54.57 Aligned_cols=105 Identities=12% Similarity=0.072 Sum_probs=71.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCcchhhhHHHHHhhhcCCCCeE-EEEeeCCccccCCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTPANAARFKTVVARAMQSGLPLQ-LIEIQFPYQEAGVPEGC 84 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~l~~~~ 84 (488)
.++||+++-..+.|++.-++++.++|+++ +.+|++++.+.+.+.++.. +.++ ++.++. .+
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~--------~~- 69 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDK--------KG- 69 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECC--------SS-
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCc--------cc-
Confidence 67899999999999999999999999998 9999999999766655432 3454 444320 00
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCC-eEEEEcCCCcchHHHHHhcCCCcEE
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKP-SCIVSDTCYPWTVDTAARFNIPRIS 146 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~p-D~vv~D~~~~~~~~~a~~lgiP~v~ 146 (488)
... .+. . .-.+...++. .++ |++|.-....-...++...|+|..+
T Consensus 70 -------~~~---~~~----~-~~~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 70 -------RHN---SIS----G-LNEVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -------HHH---HHH----H-HHHHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -------ccc---cHH----H-HHHHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 000 111 1 1123344555 589 9999765555566788888998654
No 56
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.82 E-value=0.0034 Score=60.57 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=80.5
Q ss_pred CeEEecccchhhh---hccCCcccccccCCc---------hhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEec
Q 011339 339 GILILGWAPQVLI---LSHPSIGGFLTHCSW---------NSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIG 406 (488)
Q Consensus 339 nv~~~~~~pq~~l---l~~~~~~~~IthgG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~ 406 (488)
||...+|+|+.++ |..++..++.+-+.. +-+.|+|++|+|+|+.+ ...++..+ ++.|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 9999999998775 445556555533332 35789999999999755 46788888 6999999874
Q ss_pred ccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 011339 407 VEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQDI 477 (488)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~ 477 (488)
+.+++.+++.++.. ++.+.|++|+++.++.++ .|.....++.+.+.++
T Consensus 290 -----------------~~~e~~~~i~~l~~--~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 -----------------DVEEAIMKVKNVNE--DEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQA 337 (339)
T ss_dssp -----------------SHHHHHHHHHHCCH--HHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHh
Confidence 35778888887643 456789999999888854 3566666666666543
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.20 E-value=0.49 Score=44.87 Aligned_cols=44 Identities=11% Similarity=0.052 Sum_probs=39.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCcchhhhH
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTPANAARFK 53 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~ 53 (488)
|||+++-..+.|++.-+.++.++|+++ +.+|++++.+.+.+.++
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 689999999999999999999999998 99999999987666553
No 58
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=89.88 E-value=1.5 Score=41.40 Aligned_cols=36 Identities=19% Similarity=0.118 Sum_probs=28.3
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 6 SCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 6 ~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
||+||||+|+..|.++ ...-++|.++||+|..+.+.
T Consensus 1 ~~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 36 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQ 36 (317)
T ss_dssp CCTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 5799999999988665 34457788889999877664
No 59
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=88.71 E-value=5.7 Score=35.04 Aligned_cols=104 Identities=11% Similarity=-0.012 Sum_probs=58.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCC--eEEEEe-CCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCc
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGA--AITIVT-TPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCE 85 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH--~Vt~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~ 85 (488)
|+||+|+..++.. -+..+.++|.+.+| +|..+. .+.... ........ ++.+..++ +..+
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~-~~~~A~~~-----gIp~~~~~--------~~~~- 62 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAY-AIERCKKH-----NVECKVIQ--------RKEF- 62 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCH-HHHHHHHH-----TCCEEECC--------GGGS-
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChH-HHHHHHHc-----CCCEEEeC--------cccc-
Confidence 5689988776543 46677788888888 766554 433322 22222222 66665542 1110
Q ss_pred cccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 86 NFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
.. -....+++.+.+++ .+||++|+-.+. .-...+-..+...++-+
T Consensus 63 -----~~----------r~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNi 108 (216)
T 2ywr_A 63 -----PS----------KKEFEERMALELKK--KGVELVVLAGFMRILSHNFLKYFPNKVINI 108 (216)
T ss_dssp -----SS----------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHTTSTTCEEEE
T ss_pred -----cc----------hhhhhHHHHHHHHh--cCCCEEEEeCchhhCCHHHHhhccCCeEEE
Confidence 00 01123456677788 799999988763 34445555555555554
No 60
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=87.97 E-value=6.6 Score=35.01 Aligned_cols=105 Identities=9% Similarity=-0.007 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-cchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTP-ANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGC 84 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~ 84 (488)
+||||+|+..++.. -+..+.++|.+. +++|..+.+. .... ....... .++.++.++ +..+
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~-~~~~A~~-----~gIp~~~~~--------~~~~ 83 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAY-GLERARR-----AGVDALHMD--------PAAY 83 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCH-HHHHHHH-----TTCEEEECC--------GGGS
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchH-HHHHHHH-----cCCCEEEEC--------cccc
Confidence 67899999876643 366777788876 6887655443 3222 2222222 267766543 1110
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
... ....+++.+.+++ .+||+||+-.|. .....+-..+...++-+
T Consensus 84 ------~~r----------~~~~~~~~~~l~~--~~~Dliv~agy~~IL~~~~l~~~~~~~iNi 129 (229)
T 3auf_A 84 ------PSR----------TAFDAALAERLQA--YGVDLVCLAGYMRLVRGPMLTAFPNRILNI 129 (229)
T ss_dssp ------SSH----------HHHHHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHSTTCEEEE
T ss_pred ------cch----------hhccHHHHHHHHh--cCCCEEEEcChhHhCCHHHHhhccCCEEEE
Confidence 000 1123456677788 799999988763 34455556665555554
No 61
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=87.64 E-value=1.1 Score=40.83 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchh
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAA 50 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (488)
|+|||++.==+. +---+..|+++|.+.| +|+++++..+.+
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~S 40 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCc
Confidence 678888764333 2233778899999998 599998875444
No 62
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=86.31 E-value=1.5 Score=39.68 Aligned_cols=41 Identities=17% Similarity=0.158 Sum_probs=30.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhh
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAAR 51 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~ 51 (488)
|||||+..==+. |.--+..|+++|.+.| +|+++++....+-
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg 41 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccC
Confidence 588888875444 3445888999999988 9999999855443
No 63
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=84.59 E-value=10 Score=33.35 Aligned_cols=105 Identities=10% Similarity=0.044 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-cchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTP-ANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGC 84 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~ 84 (488)
.|+||+++..++.+ -+..+.++|.+. +|+|..+.+. .... +...... .++.+..++ +..+
T Consensus 2 ~m~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~-v~~~A~~-----~gIp~~~~~--------~~~~ 64 (212)
T 3av3_A 2 HMKRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAK-VIERAAR-----ENVPAFVFS--------PKDY 64 (212)
T ss_dssp CCEEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCH-HHHHHHH-----TTCCEEECC--------GGGS
T ss_pred CCcEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcH-HHHHHHH-----cCCCEEEeC--------cccc
Confidence 46799888776644 356677788877 7898766543 3322 2222222 266665442 1110
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
... ....+++.+.+++ .+||++|+-.|. .-...+-..+...++-+
T Consensus 65 ------~~~----------~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNi 110 (212)
T 3av3_A 65 ------PSK----------AAFESEILRELKG--RQIDWIALAGYMRLIGPTLLSAYEGKIVNI 110 (212)
T ss_dssp ------SSH----------HHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHHTTTCEEEE
T ss_pred ------cch----------hhhHHHHHHHHHh--cCCCEEEEchhhhhCCHHHHhhhcCCEEEE
Confidence 000 1123456677778 799999988764 34455556555555554
No 64
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=83.74 E-value=3 Score=33.83 Aligned_cols=49 Identities=10% Similarity=0.045 Sum_probs=39.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHH
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVV 56 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~ 56 (488)
++.||++.+.+..+|-....-++..|..+|++|.+.......+.+.+..
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a 50 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAA 50 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 4578999999999999999999999999999999886654444444443
No 65
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=81.36 E-value=2.2 Score=37.49 Aligned_cols=44 Identities=14% Similarity=0.048 Sum_probs=37.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARF 52 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (488)
++.||++-..|+.|-+. ...|.+.|.++|++|.++.++.-...+
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 56789999888888877 899999999999999999998544444
No 66
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=80.60 E-value=9.1 Score=38.37 Aligned_cols=109 Identities=15% Similarity=0.137 Sum_probs=67.9
Q ss_pred eE-Eecccchhh---hhccCCcccccc---cCCch-hHHHHhhcCC-----CEeecCcccccchhHHHHHHHhcceEEec
Q 011339 340 IL-ILGWAPQVL---ILSHPSIGGFLT---HCSWN-SSLEGISAGV-----PLITWPLYGDQFWNEKLIVQVLNIGVRIG 406 (488)
Q Consensus 340 v~-~~~~~pq~~---ll~~~~~~~~It---hgG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~rv~e~~G~G~~l~ 406 (488)
++ +.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+ .+..+ .-|..++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC
Confidence 44 457777654 6777887 664 34665 7889999998 666654432 11112 2356665
Q ss_pred ccCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 011339 407 VEVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQDIMQQ 480 (488)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~ 480 (488)
. .+.++++++|.++|+++.+ .-+++.++.++.+ ++ -+....++.+++.+.+.
T Consensus 403 p---------------~d~~~lA~ai~~lL~~~~~--~r~~~~~~~~~~v----~~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P---------------YDRDEVAAALDRALTMSLA--ERISRHAEMLDVI----VK-NDINHWQECFISDLKQI 454 (482)
T ss_dssp T---------------TCHHHHHHHHHHHHTCCHH--HHHHHHHHHHHHH----HH-TCHHHHHHHHHHHHHHS
T ss_pred C---------------CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHH----Hh-CCHHHHHHHHHHHHHhc
Confidence 4 4889999999999986521 2233333333333 22 46677888888888766
No 67
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=79.98 E-value=3.6 Score=34.50 Aligned_cols=49 Identities=12% Similarity=0.086 Sum_probs=40.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHH
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVV 56 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~ 56 (488)
++.||++.+.+..+|-....-++..|..+|++|.+.......+.+.+..
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa 65 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAA 65 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 6789999999999999999999999999999999986654444444443
No 68
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=78.96 E-value=3.8 Score=33.38 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=30.5
Q ss_pred CCCEEEEEcC-CC-ccCHHHHHHHHHHHHHCCCeEEEEeCCcchh
Q 011339 8 QQPHFVLFPF-LA-QGHMIPMIDTARLLAQHGAAITIVTTPANAA 50 (488)
Q Consensus 8 ~~~kvl~~~~-~~-~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (488)
+-||++++-. |. .-.+--.+-++..|.++||+|++++++.-..
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlk 49 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALR 49 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHh
Confidence 5677766553 43 3344447788999999999999999984333
No 69
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=78.00 E-value=13 Score=35.07 Aligned_cols=42 Identities=12% Similarity=0.098 Sum_probs=35.4
Q ss_pred CCCEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeCCcch
Q 011339 8 QQPHFVLFPF-LAQGHMIPMIDTARLLAQHGAAITIVTTPANA 49 (488)
Q Consensus 8 ~~~kvl~~~~-~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (488)
++++|+|++. |+-|-..-...||..|+++|++|.++......
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 5577877765 79999999999999999999999999887443
No 70
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=77.60 E-value=16 Score=32.17 Aligned_cols=107 Identities=12% Similarity=0.060 Sum_probs=57.5
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeC-CcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCC
Q 011339 6 SCQQPHFVLFPFLAQGHMIPMIDTARLLAQ-HGAAITIVTT-PANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEG 83 (488)
Q Consensus 6 ~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~-rGH~Vt~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~ 83 (488)
+++++||+++..+..+.+. +|.++..+ .+++|..+.+ ....... +.... .++.++.++. ..
T Consensus 2 ~~~~~riavl~SG~Gsnl~---all~~~~~~~~~eI~~Vis~~~~a~~~-~~A~~-----~gIp~~~~~~--------~~ 64 (215)
T 3tqr_A 2 NREPLPIVVLISGNGTNLQ---AIIGAIQKGLAIEIRAVISNRADAYGL-KRAQQ-----ADIPTHIIPH--------EE 64 (215)
T ss_dssp --CCEEEEEEESSCCHHHH---HHHHHHHTTCSEEEEEEEESCTTCHHH-HHHHH-----TTCCEEECCG--------GG
T ss_pred CCCCcEEEEEEeCCcHHHH---HHHHHHHcCCCCEEEEEEeCCcchHHH-HHHHH-----cCCCEEEeCc--------cc
Confidence 3477899988886654444 44444444 3688887655 3222211 11111 2676665431 11
Q ss_pred CccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 84 CENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
+ +.. ....+++.+.+++ .+||+||+-.|. .-...+...+...++-+
T Consensus 65 ~------~~r----------~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNi 111 (215)
T 3tqr_A 65 F------PSR----------TDFESTLQKTIDH--YDPKLIVLAGFMRKLGKAFVSHYSGRMINI 111 (215)
T ss_dssp S------SSH----------HHHHHHHHHHHHT--TCCSEEEESSCCSCCCHHHHHHTTTSEEEE
T ss_pred c------Cch----------hHhHHHHHHHHHh--cCCCEEEEccchhhCCHHHHhhccCCeEEe
Confidence 0 110 0113467778888 899999988764 34455556665555554
No 71
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=77.48 E-value=3.4 Score=43.15 Aligned_cols=42 Identities=19% Similarity=0.167 Sum_probs=31.1
Q ss_pred ecccch---------hhhhccCCccccccc---CCc-hhHHHHhhcCCCEeecCccc
Q 011339 343 LGWAPQ---------VLILSHPSIGGFLTH---CSW-NSSLEGISAGVPLITWPLYG 386 (488)
Q Consensus 343 ~~~~pq---------~~ll~~~~~~~~Ith---gG~-gs~~eal~~GvP~v~~P~~~ 386 (488)
-.|++. .++++.+++ ||.- =|+ .+.+||+++|+|+|+.-..+
T Consensus 498 P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 498 PEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp CSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred ccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 467765 457888888 6643 344 48999999999999977643
No 72
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=76.91 E-value=18 Score=33.85 Aligned_cols=34 Identities=12% Similarity=0.020 Sum_probs=24.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++|||+|+..+.++ ....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 57999999886533 44557777889999866553
No 73
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=74.74 E-value=41 Score=30.20 Aligned_cols=123 Identities=9% Similarity=0.072 Sum_probs=67.6
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHHCCCeEEEEeC---C---c--chhhhHHHHHhhhcCCCCeEEEEeeCCccc
Q 011339 8 QQPHFVLFPF--LAQGHMIPMIDTARLLAQHGAAITIVTT---P---A--NAARFKTVVARAMQSGLPLQLIEIQFPYQE 77 (488)
Q Consensus 8 ~~~kvl~~~~--~~~GHv~p~l~LA~~L~~rGH~Vt~~~~---~---~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 77 (488)
++||.+|++. ..-|-..-.+.|++.|+++|++|.++=+ . . ....+++. .+.......+-+
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~------~g~~~~~~~~~~---- 93 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRL------AGVTQLAGLARY---- 93 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHH------HCCCEEEEEEEC----
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHH------cCCCCCCCCeeE----
Confidence 5667766664 4778888899999999999999999842 1 1 11112111 111111111111
Q ss_pred cCCCCCCccccCCCchhhHHHHHHHH-HHhhHHHHHHHHhcCCCCeEEEEcCCC----------cchHHHHHhcCCCcEE
Q 011339 78 AGVPEGCENFDMLHSTDLVSNFFKSL-RLLQLPLENLLKELTPKPSCIVSDTCY----------PWTVDTAARFNIPRIS 146 (488)
Q Consensus 78 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~pD~vv~D~~~----------~~~~~~a~~lgiP~v~ 146 (488)
.... ....-.. .... ....+.+.+.++....++|+||.|... .....+|+.++.|++.
T Consensus 94 ---~~p~-------sP~~aa~-~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVIL 162 (251)
T 3fgn_A 94 ---PQPM-------APAAAAE-HAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALV 162 (251)
T ss_dssp ---SSSS-------CHHHHHH-HTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEE
T ss_pred ---CCCC-------ChHHHHH-HcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEE
Confidence 0000 0010000 0000 012345666666544689999998731 2456799999999998
Q ss_pred Eecch
Q 011339 147 FHGFS 151 (488)
Q Consensus 147 ~~~~~ 151 (488)
+....
T Consensus 163 V~~~~ 167 (251)
T 3fgn_A 163 VVTAD 167 (251)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 76553
No 74
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=74.31 E-value=8.3 Score=33.69 Aligned_cols=51 Identities=18% Similarity=0.116 Sum_probs=42.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHh
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVAR 58 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~ 58 (488)
++.||++.+.++..|-....-++..|..+|++|.++......+.+......
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~ 137 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKK 137 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH
Confidence 467999999999999999999999999999999998776555555444443
No 75
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=73.93 E-value=42 Score=29.30 Aligned_cols=104 Identities=7% Similarity=-0.035 Sum_probs=58.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENF 87 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~ 87 (488)
+||+++..+..+ -+.+|.+++.+. +|+|..+.+............. .++.++.++ +..+
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~-----~gIp~~~~~--------~~~~--- 61 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQ-----AGIATHTLI--------ASAF--- 61 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHH-----TTCEEEECC--------GGGC---
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHH-----cCCcEEEeC--------cccc---
Confidence 478888776554 366777777765 6888766544222222222222 267766542 0110
Q ss_pred cCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 88 DMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
... ....+++.+.+++ .+||+||+-.|. .-...+-..+...++-+
T Consensus 62 ---~~r----------~~~~~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNi 107 (212)
T 1jkx_A 62 ---DSR----------EAYDRELIHEIDM--YAPDVVVLAGFMRILSPAFVSHYAGRLLNI 107 (212)
T ss_dssp ---SSH----------HHHHHHHHHHHGG--GCCSEEEESSCCSCCCHHHHHHTTTSEEEE
T ss_pred ---cch----------hhccHHHHHHHHh--cCCCEEEEeChhhhCCHHHHhhccCCEEEE
Confidence 000 1123456677888 799999988764 34445556565555554
No 76
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=73.53 E-value=6 Score=34.95 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=65.5
Q ss_pred CCCEEEEEcCCCccCHHH----HHHHHHHHHHC-CCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIP----MIDTARLLAQH-GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPE 82 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p----~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~ 82 (488)
.|.+|+++.-...|.++| ++..|++|++. |-+|+.++.....+...+.+..+ |.. +.+.+..+
T Consensus 2 ~m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~---Gad-~v~~v~~~-------- 69 (217)
T 3ih5_A 2 NANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPY---GVD-KLHVFDAE-------- 69 (217)
T ss_dssp -CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGG---TCS-EEEEEECG--------
T ss_pred CcccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhc---CCC-EEEEecCc--------
Confidence 356799988877787777 57888999875 77777665433222222222222 222 12333211
Q ss_pred CCccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCc---chHHHHHhcCCCcEEE
Q 011339 83 GCENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYP---WTVDTAARFNIPRISF 147 (488)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~---~~~~~a~~lgiP~v~~ 147 (488)
.+.. ... ......+.++++. .+||+||+-.... .+..+|..|+.|.++-
T Consensus 70 ~~~~---~~~-----------~~~a~~l~~~i~~--~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 70 GLYP---YTS-----------LPHTSILVNLFKE--EQPQICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp GGSS---CCH-----------HHHHHHHHHHHHH--HCCSEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred cccc---CCH-----------HHHHHHHHHHHHh--cCCCEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 1100 000 1124556666777 6899999887543 4677899999998864
No 77
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=73.18 E-value=4.3 Score=35.63 Aligned_cols=43 Identities=9% Similarity=0.121 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARF 52 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (488)
++.||++...++.+-+. ...|.+.|.++| +|.++.++.-...+
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 56799999999988776 899999999999 99999998544433
No 78
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=72.45 E-value=42 Score=28.89 Aligned_cols=38 Identities=18% Similarity=0.274 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
++..|.+++..+-|-..-.+.+|.+.+.+|+.|.|+..
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF 64 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQF 64 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 45678899998999999999999999999999999954
No 79
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=71.52 E-value=27 Score=32.70 Aligned_cols=34 Identities=18% Similarity=0.002 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++|||+|+..|.++ ...-++|.++||+|..+.+.
T Consensus 6 ~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 6 QSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECC
T ss_pred cCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcC
Confidence 57899999886433 45567888899999876653
No 80
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=71.17 E-value=3.9 Score=38.70 Aligned_cols=37 Identities=14% Similarity=0.044 Sum_probs=30.7
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 6 SCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 6 ~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
||.++||.|+..+..| +-.+|+.|+++||+|+..-..
T Consensus 1 ~~~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 1 SNAMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp --CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 4688999999999888 567999999999999998553
No 81
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=71.02 E-value=9.5 Score=34.64 Aligned_cols=50 Identities=16% Similarity=0.040 Sum_probs=40.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHH
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVA 57 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~ 57 (488)
++.||++.+.++..|-....-++..|..+|++|.++......+.+.....
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~ 171 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQ 171 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHH
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999998865433344434433
No 82
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=70.69 E-value=5.2 Score=38.61 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=31.5
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 9 QPHFVLFPF-LAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 9 ~~kvl~~~~-~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|++|++++. ++-|-..-...||..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 577877765 6888888899999999999999999987
No 83
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=70.59 E-value=11 Score=36.51 Aligned_cols=34 Identities=9% Similarity=0.077 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+++||+++..+.. .+.+++++++.|++|.++..+
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 6679999988754 366999999999999999764
No 84
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=70.42 E-value=7.3 Score=33.55 Aligned_cols=44 Identities=16% Similarity=0.132 Sum_probs=35.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhH
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFK 53 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (488)
|.||++...|+.|-+ =...+.++|.++|++|.++.++.-...+.
T Consensus 1 mk~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 1 MQKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CCEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 358999999988855 57899999999999999999985544443
No 85
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=70.37 E-value=5.5 Score=34.55 Aligned_cols=43 Identities=9% Similarity=0.039 Sum_probs=35.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCCcchhhhH
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQH-GAAITIVTTPANAARFK 53 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~ 53 (488)
|||++-..|+.|-+. ...|.+.|.++ |++|.++.++.-...+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 588888888887766 89999999999 99999999985555444
No 86
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=70.04 E-value=92 Score=31.07 Aligned_cols=110 Identities=13% Similarity=0.101 Sum_probs=70.4
Q ss_pred CeEEecccchh---hhhccCCcccccc---cCCch-hHHHHhhcC---CCEeecCcccccchhHHHHHHHhc-ceEEecc
Q 011339 339 GILILGWAPQV---LILSHPSIGGFLT---HCSWN-SSLEGISAG---VPLITWPLYGDQFWNEKLIVQVLN-IGVRIGV 407 (488)
Q Consensus 339 nv~~~~~~pq~---~ll~~~~~~~~It---hgG~g-s~~eal~~G---vP~v~~P~~~DQ~~na~rv~e~~G-~G~~l~~ 407 (488)
.|++...+|+. +++..+++ ||. +=|+| +..|++++| .|+|+--+.+ .+ +.+| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~----~~l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA----EVLGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH----HHHGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH----HHhCCCEEEECC
Confidence 57777777764 46667777 553 45887 568999986 5655543322 22 2333 4677765
Q ss_pred cCCCCCCcccccccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 011339 408 EVPLDFGEEEEIGVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQDIMQQ 480 (488)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~ 480 (488)
.+.++++++|.++|+++.+ .-+++.+++.+.+. .-++..-++.+++++...
T Consensus 423 ---------------~D~~~lA~AI~~aL~m~~~--er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 ---------------FDLVEQAEAISAALAAGPR--QRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp ---------------TBHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred ---------------CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 5899999999999987622 44444555555543 345667777888777654
No 87
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=68.91 E-value=4.5 Score=36.67 Aligned_cols=41 Identities=15% Similarity=0.043 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchh
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAA 50 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (488)
++||||+..==+. |.--+..|+++|.+ +|+|+++++....+
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 7799999886444 44457888999987 89999999975544
No 88
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=68.80 E-value=35 Score=32.06 Aligned_cols=105 Identities=10% Similarity=0.019 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC-Ccc---hhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT-PAN---AARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEG 83 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~ 83 (488)
.+|||+|+. --+-...+.++|.++||+|..+.+ ++. .+.++...... ++.++... .
T Consensus 21 ~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~-----gIpv~~~~----------~ 80 (329)
T 2bw0_A 21 QSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD-----GVPVFKYS----------R 80 (329)
T ss_dssp CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH-----TCCEEECS----------C
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc-----CCCEEecC----------c
Confidence 448999983 223344567899999999876554 321 12233222222 56554432 0
Q ss_pred CccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEEecc
Q 011339 84 CENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISFHGF 150 (488)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~~~~ 150 (488)
.... ....+++.+.++. .+||++|+=.|. .-...+-......++-+.++
T Consensus 81 ~~~~----------------~~~~~~~~~~l~~--~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 81 WRAK----------------GQALPDVVAKYQA--LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp CEET----------------TEECHHHHHHHHT--TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred cccc----------------ccccHHHHHHHHh--cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 1000 0012345566777 799999987764 24444555555556655444
No 89
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=67.30 E-value=10 Score=30.44 Aligned_cols=43 Identities=7% Similarity=-0.053 Sum_probs=31.4
Q ss_pred CCCEEEEEcC-C--CccCHHHHHHHHHHHHHCCCeEEEEeCCcchh
Q 011339 8 QQPHFVLFPF-L--AQGHMIPMIDTARLLAQHGAAITIVTTPANAA 50 (488)
Q Consensus 8 ~~~kvl~~~~-~--~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (488)
.+.|++|+.. + ........+.+|...++.||+|+++.+..-..
T Consensus 14 ~~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 14 QXXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CCCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred ccceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 3567765554 4 35667788889999999999999887764433
No 90
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=66.79 E-value=4 Score=35.35 Aligned_cols=44 Identities=7% Similarity=-0.036 Sum_probs=35.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARF 52 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (488)
++.||++...|+.|=+. ...|.+.|.++|++|.++.++.-...+
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 45689888888877775 789999999999999999998554444
No 91
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=65.90 E-value=3.8 Score=33.03 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=25.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|+||+++.. |.+ -..+|+.|.++||+|+++...
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 5678988865 433 357899999999999998654
No 92
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=65.55 E-value=20 Score=34.03 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=34.7
Q ss_pred CCCEEEEEcC-CCccCHHHHHHHHHHHH--HCCCeEEEEeCCcc
Q 011339 8 QQPHFVLFPF-LAQGHMIPMIDTARLLA--QHGAAITIVTTPAN 48 (488)
Q Consensus 8 ~~~kvl~~~~-~~~GHv~p~l~LA~~L~--~rGH~Vt~~~~~~~ 48 (488)
+.+||++++. |+-|-..-...||..|+ ++|++|.++.....
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 4567877765 79999999999999999 89999999988743
No 93
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=65.47 E-value=26 Score=30.97 Aligned_cols=36 Identities=8% Similarity=-0.008 Sum_probs=21.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
|++|+++...-.--..-+=.....++++|++|++++
T Consensus 1 m~~vL~v~aHPDDe~l~~ggtia~~~~~G~~v~vv~ 36 (227)
T 1uan_A 1 MLDLLVVAPHPDDGELGCGGTLARAKAEGLSTGILD 36 (227)
T ss_dssp CEEEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEEeCCCcHHHhHHHHHHHHHhCCCcEEEEE
Confidence 456665554333334444445556678999987763
No 94
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=65.38 E-value=30 Score=29.38 Aligned_cols=39 Identities=23% Similarity=0.308 Sum_probs=31.1
Q ss_pred CEEEEEc--CCCccCHHHHHHHHHHHHHCCCeEEEEeCCcc
Q 011339 10 PHFVLFP--FLAQGHMIPMIDTARLLAQHGAAITIVTTPAN 48 (488)
Q Consensus 10 ~kvl~~~--~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~ 48 (488)
||++.+. -++-|-..-...||..|+++|++|.++-....
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 4565554 36888888899999999999999999977543
No 95
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=64.66 E-value=21 Score=28.73 Aligned_cols=97 Identities=9% Similarity=0.058 Sum_probs=63.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCcchhhhHH-HHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTPANAARFKT-VVARAMQSGLPLQLIEIQFPYQEAGVPEGC 84 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~ 84 (488)
.||+|++... ..+=.-++.+|++|.+. ||++ +++......+++ . |+....+. ..+
T Consensus 2 ~~~~ialsv~--D~dK~~~v~~a~~~~~ll~Gf~l--~AT~gTa~~L~e~~---------Gl~v~~v~------k~~--- 59 (134)
T 2xw6_A 2 HMRALALIAH--DAKKEEMVAFCQRHREVLARFPL--VATGTTGRRIEEAT---------GLTVEKLL------SGP--- 59 (134)
T ss_dssp CSCEEEEEEC--GGGHHHHHHHHHHTHHHHTTSCE--EECHHHHHHHHHHH---------CCCCEECS------CGG---
T ss_pred CccEEEEEEe--cccHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHhh---------CceEEEEE------ecC---
Confidence 6788888754 44556799999999999 9964 455555555554 3 55443321 111
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCC--Cc--------chHHHHHhcCCCcEEE
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTC--YP--------WTVDTAARFNIPRISF 147 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~--~~--------~~~~~a~~lgiP~v~~ 147 (488)
.. -...+.+.+++ .+.|+||...- .. .-..+|-..+||+++.
T Consensus 60 --------~e-----------G~p~I~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 60 --------LG-----------GDQQMGARVAE--GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp --------GT-----------HHHHHHHHHHT--TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred --------CC-----------CcchHHHHHHC--CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 00 13457778888 89999997543 11 2466888999999873
No 96
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=64.36 E-value=30 Score=30.89 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=22.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
+++|+++..--.--..-+=.....|+++|++|++++
T Consensus 3 ~~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 3 GLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp CCSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEE
Confidence 455666554333334445455567778999988773
No 97
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=63.33 E-value=14 Score=32.36 Aligned_cols=49 Identities=12% Similarity=-0.006 Sum_probs=40.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHH
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVV 56 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~ 56 (488)
++.||++.+.++..|-....-++..|..+|++|.+.......+.+.+..
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~ 139 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEA 139 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHH
Confidence 5689999999999999999999999999999999987754444443433
No 98
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=63.00 E-value=53 Score=31.04 Aligned_cols=40 Identities=23% Similarity=0.304 Sum_probs=34.1
Q ss_pred CCCEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 8 QQPHFVLFPF-LAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 8 ~~~kvl~~~~-~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
++.+|+|++. |+-|-..-...||..|+++|++|.++....
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5566666654 799999999999999999999999998875
No 99
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=62.62 E-value=13 Score=36.60 Aligned_cols=33 Identities=12% Similarity=0.077 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
.||+++..+ . -.+.+++++++.|++|..+.+..
T Consensus 7 ~kiLI~g~g---~--~a~~i~~aa~~~G~~~v~v~~~~ 39 (446)
T 3ouz_A 7 KSILIANRG---E--IALRALRTIKEMGKKAICVYSEA 39 (446)
T ss_dssp CEEEECCCH---H--HHHHHHHHHHHTTCEEEEEEEGG
T ss_pred ceEEEECCC---H--HHHHHHHHHHHcCCEEEEEEcCc
Confidence 467775432 2 45789999999999998886543
No 100
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=62.60 E-value=7 Score=33.20 Aligned_cols=43 Identities=2% Similarity=-0.010 Sum_probs=34.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhH
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFK 53 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (488)
+||++...++.|=+. ...+.+.|+++|++|.++.++.-...+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 478888777766665 8999999999999999999986555543
No 101
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=62.05 E-value=43 Score=31.07 Aligned_cols=40 Identities=13% Similarity=-0.010 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEEecc
Q 011339 109 PLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISFHGF 150 (488)
Q Consensus 109 ~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~~~~ 150 (488)
++.+.+++ .+||++|+-.|. .-...+-......++-++++
T Consensus 66 ~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHH--TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHh--cCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 34556777 799999987763 34444555555556665444
No 102
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=60.56 E-value=84 Score=27.24 Aligned_cols=104 Identities=10% Similarity=-0.002 Sum_probs=55.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENF 87 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~ 87 (488)
+||+++..+..+.+ .+|.+.+.+. +|+|..+.+............. .++.++.++ +..+
T Consensus 1 ~riaVl~SG~Gs~L---~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~--------~~~~--- 61 (209)
T 1meo_A 1 ARVAVLISGTGSNL---QALIDSTREPNSSAQIDIVISNKAAVAGLDKAER-----AGIPTRVIN--------HKLY--- 61 (209)
T ss_dssp CEEEEEESSSCTTH---HHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHH-----TTCCEEECC--------GGGS---
T ss_pred CeEEEEEECCchHH---HHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHH-----cCCCEEEEC--------cccc---
Confidence 47888877665543 3444555554 7998776554322222222222 266665443 1110
Q ss_pred cCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 88 DMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
... ....+++.+.+++ .+||+||+-.|. .-...+-..+...++-+
T Consensus 62 ---~~r----------~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNi 107 (209)
T 1meo_A 62 ---KNR----------VEFDSAIDLVLEE--FSIDIVCLAGFMRILSGPFVQKWNGKMLNI 107 (209)
T ss_dssp ---SSH----------HHHHHHHHHHHHH--TTCCEEEEESCCSCCCHHHHHHTTTSEEEE
T ss_pred ---Cch----------hhhhHHHHHHHHh--cCCCEEEEcchhhhCCHHHHhhhcCCEEEE
Confidence 010 1123456677778 799999987764 34444555555555554
No 103
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=60.26 E-value=39 Score=31.55 Aligned_cols=33 Identities=18% Similarity=0.043 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|||+|+..|.++- ..-++|.+.||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeC
Confidence 48999999886653 4457888899999877664
No 104
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=60.24 E-value=8.1 Score=36.55 Aligned_cols=34 Identities=21% Similarity=0.127 Sum_probs=28.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++|||+++..|+.| ..+|..|++.||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 46899999888777 45789999999999999864
No 105
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=60.14 E-value=6.2 Score=36.41 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|||+++. +.|-+= ..|+++|.++||+|+.++-.
T Consensus 1 MkILVTG--atGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVGG--GTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 7887764 445443 45789999999999998753
No 106
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=59.53 E-value=9.9 Score=35.68 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++|||.|+..+..| ..+|+.|+++||+|+++...
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 67899999888887 67899999999999988543
No 107
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=59.50 E-value=7.5 Score=31.81 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=26.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++.||+++.. |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4567888854 5444 68899999999999999774
No 108
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=59.28 E-value=90 Score=31.41 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhc-------CCCcEEE
Q 011339 108 LPLENLLKELTPKPSCIVSDTCYPWTVDTAARF-------NIPRISF 147 (488)
Q Consensus 108 ~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~l-------giP~v~~ 147 (488)
.++++++++ .+||++|.... +..+|+.+ |||++.+
T Consensus 428 ~~l~~~i~~--~~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 428 WHLRSLVFT--DKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHH--TCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHHh--cCCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 456677777 79999999864 44566666 9999874
No 109
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=59.24 E-value=12 Score=32.44 Aligned_cols=39 Identities=15% Similarity=0.039 Sum_probs=32.8
Q ss_pred CCCEEEEEcCCCccCHH-HHHHHHHHHHHCCCeEEEEeCCc
Q 011339 8 QQPHFVLFPFLAQGHMI-PMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~-p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
++.||++--.|+ +..+ =.+.+.++|.++|++|.++.++.
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 567898888887 4555 78999999999999999998873
No 110
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=58.32 E-value=5.6 Score=37.06 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=27.0
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|..+. ++|||.|+..+..|. .+|+.|+++||+|+++..
T Consensus 1 M~~~~--~~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTG--TDFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADL 38 (303)
T ss_dssp --------CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCC--CCCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEEC
Confidence 54444 678999998776664 689999999999998854
No 111
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=57.96 E-value=82 Score=26.26 Aligned_cols=141 Identities=16% Similarity=0.100 Sum_probs=77.8
Q ss_pred CeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHh---cCCCeEEecccchhhhh
Q 011339 276 NSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERV---KGRGILILGWAPQVLIL 352 (488)
Q Consensus 276 ~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~nv~~~~~~pq~~ll 352 (488)
+|.|-|-+||... ....+++...++.++..+-..+.+-.| .|+.+.+.. ....
T Consensus 11 ~~~V~IimGS~SD--~~v~~~a~~~L~~~Gi~~dv~V~SaHR---------~p~~l~~~~~~a~~~g------------- 66 (170)
T 1xmp_A 11 KSLVGVIMGSTSD--WETMKYACDILDELNIPYEKKVVSAHR---------TPDYMFEYAETARERG------------- 66 (170)
T ss_dssp CCSEEEEESSGGG--HHHHHHHHHHHHHTTCCEEEEECCTTT---------SHHHHHHHHHHTTTTT-------------
T ss_pred CCcEEEEECcHHH--HHHHHHHHHHHHHcCCCEEEEEEeccC---------CHHHHHHHHHHHHhCC-------------
Confidence 4568888888775 445566677777788776665555543 344332211 1111
Q ss_pred ccCCcccccccCCch----hHHHHhhcCCCEeecCcccc-cchhHHH--HHHH--hcceE---EecccCCCCCCcccccc
Q 011339 353 SHPSIGGFLTHCSWN----SSLEGISAGVPLITWPLYGD-QFWNEKL--IVQV--LNIGV---RIGVEVPLDFGEEEEIG 420 (488)
Q Consensus 353 ~~~~~~~~IthgG~g----s~~eal~~GvP~v~~P~~~D-Q~~na~r--v~e~--~G~G~---~l~~~~~~~~~~~~~~~ 420 (488)
.++ +|.=+|.. ++.-++ .-.|+|.+|.... -...... +. + .|+.+ .+++.
T Consensus 67 --~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSiv-qmP~GvpVatV~I~~a------------ 128 (170)
T 1xmp_A 67 --LKV--IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIGKA------------ 128 (170)
T ss_dssp --CCE--EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHH-CCCTTCCCEECCSSHH------------
T ss_pred --CcE--EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecCCc------------
Confidence 122 66555543 333333 4689999998542 1112222 32 4 44432 12211
Q ss_pred cccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcC
Q 011339 421 VLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEET 463 (488)
Q Consensus 421 ~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~g 463 (488)
+..++..++..|. -+.|+ .++++.+.+++..++.+.+.
T Consensus 129 ~~~nAallAaqIl-a~~d~----~l~~kl~~~r~~~~~~v~~~ 166 (170)
T 1xmp_A 129 GSTNAGLLAAQIL-GSFHD----DIHDALELRREAIEKDVREG 166 (170)
T ss_dssp HHHHHHHHHHHHH-HTTCH----HHHHHHHHHHHHHHHHHHC-
T ss_pred chHHHHHHHHHHH-ccCCH----HHHHHHHHHHHHHHHHHHhc
Confidence 1356666665554 34566 89999999999887765543
No 112
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=57.53 E-value=70 Score=32.15 Aligned_cols=35 Identities=11% Similarity=0.249 Sum_probs=26.6
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhc-------CCCcEEE
Q 011339 108 LPLENLLKELTPKPSCIVSDTCYPWTVDTAARF-------NIPRISF 147 (488)
Q Consensus 108 ~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~l-------giP~v~~ 147 (488)
.++++++++ .+||++|.+.. +..+|+.+ |||++.+
T Consensus 424 ~~l~~~i~~--~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 424 WHFRSLMFT--RQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHH--HCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHhh--cCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 345666666 58999999853 57778888 9999874
No 113
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=57.40 E-value=31 Score=30.23 Aligned_cols=105 Identities=10% Similarity=0.072 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCcc
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQ-HGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCEN 86 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~ 86 (488)
.|+||+++..+..+.+. +|.+++.+ .+++|..+.+....... +.... .++.++.++. ..
T Consensus 11 ~~~ri~vl~SG~gsnl~---all~~~~~~~~~eI~~Vis~~~a~~~-~~A~~-----~gIp~~~~~~--------~~--- 70 (215)
T 3da8_A 11 APARLVVLASGTGSLLR---SLLDAAVGDYPARVVAVGVDRECRAA-EIAAE-----ASVPVFTVRL--------AD--- 70 (215)
T ss_dssp SSEEEEEEESSCCHHHH---HHHHHSSTTCSEEEEEEEESSCCHHH-HHHHH-----TTCCEEECCG--------GG---
T ss_pred CCcEEEEEEeCChHHHH---HHHHHHhccCCCeEEEEEeCCchHHH-HHHHH-----cCCCEEEeCc--------cc---
Confidence 67899999887644433 34444432 34688766554332221 11122 2666654320 00
Q ss_pred ccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 87 FDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
.... ....+++.+.+++ .+||++|+-.|. .-...+...+...++-+
T Consensus 71 ---~~~r----------~~~d~~~~~~l~~--~~~Dlivlagy~~iL~~~~l~~~~~~~iNi 117 (215)
T 3da8_A 71 ---HPSR----------DAWDVAITAATAA--HEPDLVVSAGFMRILGPQFLSRFYGRTLNT 117 (215)
T ss_dssp ---SSSH----------HHHHHHHHHHHHT--TCCSEEEEEECCSCCCHHHHHHHTTTEEEE
T ss_pred ---ccch----------hhhhHHHHHHHHh--hCCCEEEEcCchhhCCHHHHhhccCCeEEe
Confidence 0010 1123567778888 899999987654 34444555554445544
No 114
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=57.12 E-value=11 Score=35.36 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=26.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
.+|||+++..|+.| ..+|..|++.||+|+++.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~ 49 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIA 49 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEE
Confidence 67999999998888 467899999999999993
No 115
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=56.67 E-value=16 Score=34.00 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=27.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
|||+++..|+.|- .+|..|++.||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 6899999999884 56899999999999998764
No 116
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=56.53 E-value=11 Score=32.04 Aligned_cols=41 Identities=12% Similarity=0.096 Sum_probs=31.2
Q ss_pred CCCCCEEEEEcCCCccCHHHHHH-HHHHHHH-CCCeEEEEeCC
Q 011339 6 SCQQPHFVLFPFLAQGHMIPMID-TARLLAQ-HGAAITIVTTP 46 (488)
Q Consensus 6 ~~~~~kvl~~~~~~~GHv~p~l~-LA~~L~~-rGH~Vt~~~~~ 46 (488)
+|.||||+++-....|+..-+.. +++.|.+ .|++|.++...
T Consensus 1 ~~~M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 1 SNAMGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp CCCCEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CCCCCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 46889999888878888766544 5667777 89999988654
No 117
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=55.95 E-value=3.1 Score=36.16 Aligned_cols=38 Identities=16% Similarity=0.080 Sum_probs=28.3
Q ss_pred HHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchH
Q 011339 110 LENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSC 152 (488)
Q Consensus 110 l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~ 152 (488)
....++. ...|+||.|.. +..+|+++|+|.+.+.++..
T Consensus 134 ~i~~l~~--~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 134 LISKVKT--ENIKIVVSGKT---VTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp HHHHHHH--TTCCEEEECHH---HHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHH--CCCeEEECCHH---HHHHHHHcCCcEEEEecCHH
Confidence 3334444 59999999844 68899999999998766443
No 118
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=55.85 E-value=9 Score=33.40 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=25.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHH-HCCCeEEEEeCC
Q 011339 7 CQQPHFVLFPFLAQGHMIPMIDTARLLA-QHGAAITIVTTP 46 (488)
Q Consensus 7 ~~~~kvl~~~~~~~GHv~p~l~LA~~L~-~rGH~Vt~~~~~ 46 (488)
+.|||.++++. +.|-+ =..++++|+ ++||+|+.+.-.
T Consensus 2 ~~mmk~vlVtG-asg~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 2 NAMYXYITILG-AAGQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CCSCSEEEEES-TTSHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred CceEEEEEEEe-CCcHH--HHHHHHHHHhcCCceEEEEecC
Confidence 46788444443 33333 367899999 899999988654
No 119
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=55.68 E-value=7.6 Score=36.08 Aligned_cols=37 Identities=16% Similarity=0.154 Sum_probs=29.3
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 5 GSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 5 ~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|+.+++||.|+..+..|+ .+|..|+++||+|+++...
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 333678899998887776 5889999999999988654
No 120
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=55.49 E-value=16 Score=28.15 Aligned_cols=39 Identities=8% Similarity=0.092 Sum_probs=28.0
Q ss_pred CCEEEEEcCC---CccCHHHHHHHHHHHHHC-CC-eEEEEeCCc
Q 011339 9 QPHFVLFPFL---AQGHMIPMIDTARLLAQH-GA-AITIVTTPA 47 (488)
Q Consensus 9 ~~kvl~~~~~---~~GHv~p~l~LA~~L~~r-GH-~Vt~~~~~~ 47 (488)
|+|++++-.. +.......+.+|..+.+. || +|+++....
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~d 44 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD 44 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEch
Confidence 3466555543 234566789999999999 99 999887763
No 121
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=55.44 E-value=16 Score=34.10 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=28.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
|||+++..|+.|- .+|..|++.||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh
Confidence 7899998888884 57889999999999998764
No 122
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=55.11 E-value=60 Score=28.36 Aligned_cols=100 Identities=9% Similarity=0.078 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-cchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTP-ANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGC 84 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~ 84 (488)
+++||+++..+..+- +.+|.+++.+. +++|..+.+. ......+ ...+ .++.++.++ +..+
T Consensus 7 ~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~-~A~~-----~gIp~~~~~--------~~~~ 69 (215)
T 3kcq_A 7 KELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLL-IAQS-----YGIPTFVVK--------RKPL 69 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHH-HHHH-----TTCCEEECC--------BTTB
T ss_pred CCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHH-HHHH-----cCCCEEEeC--------cccC
Confidence 667898888765433 44555565544 3788766553 2222111 1111 266665543 0110
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
. .+++.+.+++ .+||+||+-.|. .-...+...+...++-+
T Consensus 70 ---------~------------~~~~~~~L~~--~~~Dlivlagy~~IL~~~~l~~~~~~~iNi 110 (215)
T 3kcq_A 70 ---------D------------IEHISTVLRE--HDVDLVCLAGFMSILPEKFVTDWHHKIINI 110 (215)
T ss_dssp ---------C------------HHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHTTTSEEEE
T ss_pred ---------C------------hHHHHHHHHH--hCCCEEEEeCCceEeCHHHHhhccCCeEEE
Confidence 0 1566777888 799999988764 34455555565555554
No 123
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=54.93 E-value=83 Score=31.29 Aligned_cols=36 Identities=14% Similarity=0.164 Sum_probs=28.2
Q ss_pred hHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEE
Q 011339 107 QLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISF 147 (488)
Q Consensus 107 ~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~ 147 (488)
..++.+++++ .+||++|... ....+|+++|||++.+
T Consensus 390 ~~el~~~i~~--~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ARVLLKTVDE--YQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHHH--TTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHh--cCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 3456677777 7999999864 4667899999999754
No 124
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=54.84 E-value=35 Score=33.82 Aligned_cols=34 Identities=15% Similarity=0.370 Sum_probs=27.9
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEE
Q 011339 109 PLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISF 147 (488)
Q Consensus 109 ~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~ 147 (488)
.+++++++ .+||++|.... ...+|+++|||++.+
T Consensus 366 ~le~~i~~--~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARA--GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 46677777 69999999854 678999999999874
No 125
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=54.48 E-value=17 Score=32.27 Aligned_cols=40 Identities=13% Similarity=0.115 Sum_probs=35.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
-++||++..-|+-|-..-++.+|.+|+++|++|.++....
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4678899999999999999999999999999998887754
No 126
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=53.67 E-value=14 Score=32.31 Aligned_cols=39 Identities=10% Similarity=-0.027 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHHCCCeEEEEeCCc
Q 011339 8 QQPHFVLFPFLAQGHMIP-MIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p-~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
++.||++.-.|+ +..+- ...+.+.|.++|++|.++.++.
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 557898888876 45665 8899999999999999999884
No 127
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=53.61 E-value=12 Score=30.60 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=26.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+.+||+++..+..| ..+++.|.++|++|+++...
T Consensus 18 ~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 56899998654444 56789999999999998654
No 128
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=52.74 E-value=6.5 Score=36.62 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=27.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC-----C-CeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH-----G-AAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r-----G-H~Vt~~~~ 45 (488)
.+|||+|+..|..|. .+|..|+++ | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 568999998887774 568888888 9 99999865
No 129
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=51.87 E-value=14 Score=34.09 Aligned_cols=34 Identities=9% Similarity=0.096 Sum_probs=25.1
Q ss_pred CCC-CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 7 CQQ-PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 7 ~~~-~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|+| |||+|+..+..|. .+|+.|.+.||+|+++..
T Consensus 2 ~~M~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 2 NAMTMKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp ----CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CcccceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 455 6999998877774 468889999999987754
No 130
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=51.40 E-value=69 Score=31.48 Aligned_cols=42 Identities=12% Similarity=0.236 Sum_probs=35.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchh
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAA 50 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (488)
+..|+++..++-|-..-...||..|+++|+.|.+++...+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 345577777899999999999999999999999998876544
No 131
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=51.33 E-value=43 Score=32.54 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=24.1
Q ss_pred HHHHHHHHhcCCCCeEEEEc--CCCcchHHHHHhcCCCc
Q 011339 108 LPLENLLKELTPKPSCIVSD--TCYPWTVDTAARFNIPR 144 (488)
Q Consensus 108 ~~l~~~l~~~~~~pD~vv~D--~~~~~~~~~a~~lgiP~ 144 (488)
+.+.++.++ .++|.|+.- .....+..+++.+|+|.
T Consensus 65 ~~~~~~~~~--~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 DVVRQTFVE--FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHH--SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHHhhhh--cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 445566667 799999853 22335667889999994
No 132
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=51.14 E-value=18 Score=29.43 Aligned_cols=42 Identities=10% Similarity=-0.015 Sum_probs=32.2
Q ss_pred EEE-EEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 011339 11 HFV-LFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARF 52 (488)
Q Consensus 11 kvl-~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (488)
|++ ++..+..-.+++.+.+|...++.|++|+++.+..-...+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l 51 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAI 51 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHT
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHH
Confidence 554 444567888899999999999999999999887444333
No 133
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=51.10 E-value=18 Score=32.85 Aligned_cols=40 Identities=18% Similarity=0.184 Sum_probs=34.5
Q ss_pred CCCEEEEEcCC---CccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 8 QQPHFVLFPFL---AQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 8 ~~~kvl~~~~~---~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
..||.+|++.+ +.|-=.-..+|+..|..||+.||..-..+
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DP 63 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccc
Confidence 67899999965 77888889999999999999999985543
No 134
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=50.98 E-value=24 Score=29.85 Aligned_cols=44 Identities=11% Similarity=0.104 Sum_probs=29.2
Q ss_pred EEecccch-hhhhc-cCCcccccccCCchhHHH---HhhcCCCEeecCcc
Q 011339 341 LILGWAPQ-VLILS-HPSIGGFLTHCSWNSSLE---GISAGVPLITWPLY 385 (488)
Q Consensus 341 ~~~~~~pq-~~ll~-~~~~~~~IthgG~gs~~e---al~~GvP~v~~P~~ 385 (488)
++..+.+. ..++. .++. .++--||.||..| ++.+++|++++|.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 44455554 33443 4444 4566788887665 57799999999984
No 135
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=50.95 E-value=13 Score=31.76 Aligned_cols=42 Identities=12% Similarity=0.127 Sum_probs=32.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARF 52 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (488)
.||++...|+.|=+ =...+.++|.++|++|.++.++.-...+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 36777777776655 6789999999999999999998544433
No 136
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=50.77 E-value=10 Score=35.09 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=26.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
.||||+++..|..|. .+|..|+++||+|+++..
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEEC
Confidence 478999998776664 678999999999999865
No 137
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=50.68 E-value=85 Score=27.24 Aligned_cols=105 Identities=14% Similarity=0.051 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-cchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTP-ANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGC 84 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~ 84 (488)
.++||+++..+..+- +.+|.+++.+. .++|..+.+. ...... ..... .++.+..++. ..+
T Consensus 6 ~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l-~~A~~-----~gIp~~~~~~--------~~~ 68 (209)
T 4ds3_A 6 KRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGL-AKAEA-----AGIATQVFKR--------KDF 68 (209)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHH-HHHHH-----TTCCEEECCG--------GGS
T ss_pred CCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHH-HHHHH-----cCCCEEEeCc--------ccc
Confidence 456898887765443 45555666554 3688766552 222211 11111 2666655431 000
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
... ....+++.+.+++ .+||++|+-.|. .-...+...+...++-+
T Consensus 69 ------~~r----------~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNi 114 (209)
T 4ds3_A 69 ------ASK----------EAHEDAILAALDV--LKPDIICLAGYMRLLSGRFIAPYEGRILNI 114 (209)
T ss_dssp ------SSH----------HHHHHHHHHHHHH--HCCSEEEESSCCSCCCHHHHGGGTTCEEEE
T ss_pred ------CCH----------HHHHHHHHHHHHh--cCCCEEEEeccccCcCHHHHhhccCCeEEE
Confidence 000 1113466677777 799999988764 34455555555555554
No 138
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=50.47 E-value=10 Score=35.33 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=27.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
+++||.|+..+..|. .+|+.|+++||+|+++..
T Consensus 8 ~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 678999998776664 689999999999998844
No 139
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=50.21 E-value=1.2e+02 Score=25.69 Aligned_cols=143 Identities=15% Similarity=0.119 Sum_probs=74.5
Q ss_pred CeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccC
Q 011339 276 NSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHP 355 (488)
Q Consensus 276 ~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~ 355 (488)
-|.|-|-+||... ....+++...++.++..+-..+.+-.| .|+.+.+..... . -..+
T Consensus 13 ~~~V~IimGS~SD--~~v~~~a~~~L~~~Gi~~dv~V~SaHR---------~p~~l~~~~~~a-----------~-~~g~ 69 (183)
T 1o4v_A 13 VPRVGIIMGSDSD--LPVMKQAAEILEEFGIDYEITIVSAHR---------TPDRMFEYAKNA-----------E-ERGI 69 (183)
T ss_dssp -CEEEEEESCGGG--HHHHHHHHHHHHHTTCEEEEEECCTTT---------CHHHHHHHHHHT-----------T-TTTC
T ss_pred CCeEEEEeccHHH--HHHHHHHHHHHHHcCCCeEEEEEcccC---------CHHHHHHHHHHH-----------H-hCCC
Confidence 4578888888775 445566677777778776655555443 343332211100 0 0011
Q ss_pred CcccccccCCc----hhHHHHhhcCCCEeecCcccc-cchhHHH--HHHHh--cceEEe-cccCCCCCCcccccccccCH
Q 011339 356 SIGGFLTHCSW----NSSLEGISAGVPLITWPLYGD-QFWNEKL--IVQVL--NIGVRI-GVEVPLDFGEEEEIGVLVKK 425 (488)
Q Consensus 356 ~~~~~IthgG~----gs~~eal~~GvP~v~~P~~~D-Q~~na~r--v~e~~--G~G~~l-~~~~~~~~~~~~~~~~~~~~ 425 (488)
++ +|.=+|. .++.-++ .-.|+|.+|.... -...... +. +. |+.+.. ..+ +..++
T Consensus 70 ~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~Id------------~~~nA 133 (183)
T 1o4v_A 70 EV--IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-QMPGGVPVATVAIN------------NAKNA 133 (183)
T ss_dssp CE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTCCCEECCTT------------CHHHH
T ss_pred cE--EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecC------------CchHH
Confidence 22 5555443 2444444 6788999997542 1112222 22 44 432211 111 24666
Q ss_pred HHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhc
Q 011339 426 EDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEE 462 (488)
Q Consensus 426 ~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~ 462 (488)
..++..|.. +.|+ .++++.+..++.....+.+
T Consensus 134 a~lAaqIla-~~d~----~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 134 GILAASILG-IKYP----EIARKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHHHHHH-TTCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCCH----HHHHHHHHHHHHHHHHHHH
Confidence 666665553 3555 7888888877777665443
No 140
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=49.86 E-value=21 Score=30.47 Aligned_cols=39 Identities=23% Similarity=0.341 Sum_probs=28.3
Q ss_pred CCCEEEEEcCCCccCHHHHHH-HHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMID-TARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~-LA~~L~~rGH~Vt~~~~~ 46 (488)
.||||+++.....|+..-+.. +++.|.+.|++|.++...
T Consensus 4 ~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 4 SSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp -CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 578998888777887665544 466677789999888654
No 141
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=49.63 E-value=25 Score=31.03 Aligned_cols=28 Identities=18% Similarity=0.094 Sum_probs=23.4
Q ss_pred CCcccccccCCchhHHHHhhcCCCEeecCcc
Q 011339 355 PSIGGFLTHCSWNSSLEGISAGVPLITWPLY 385 (488)
Q Consensus 355 ~~~~~~IthgG~gs~~eal~~GvP~v~~P~~ 385 (488)
+++ +|+.||.......- .++|+|-++..
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCC
Confidence 455 99999999888875 57999999984
No 142
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=49.61 E-value=16 Score=32.24 Aligned_cols=40 Identities=8% Similarity=-0.029 Sum_probs=22.7
Q ss_pred CCCCCEEEEEcCCCc--cCHHHHHH----HHHHHHHC--CC-eEEEEeC
Q 011339 6 SCQQPHFVLFPFLAQ--GHMIPMID----TARLLAQH--GA-AITIVTT 45 (488)
Q Consensus 6 ~~~~~kvl~~~~~~~--GHv~p~l~----LA~~L~~r--GH-~Vt~~~~ 45 (488)
||.||||+++...-. |.-.-... +++.|.++ || +|+++--
T Consensus 1 ~~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~idL 49 (223)
T 3u7i_A 1 SNAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQINL 49 (223)
T ss_dssp --CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEET
T ss_pred CCccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 579999988776543 22222333 34455554 68 8888754
No 143
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=49.43 E-value=25 Score=31.54 Aligned_cols=39 Identities=10% Similarity=0.231 Sum_probs=28.8
Q ss_pred CCCEEEEEcCCCccC-----------HHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGH-----------MIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GH-----------v~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|.||+++.....+. ..=++.....|.+.|++|+++++.
T Consensus 2 ~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 2 TPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp -CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899888764322 234777788999999999999875
No 144
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=49.37 E-value=14 Score=34.33 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=25.9
Q ss_pred CCC-EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 011339 8 QQP-HFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 8 ~~~-kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
.|. ||.|+..+..|. ++|+.|.++||+|+++-
T Consensus 3 ~Ms~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp -CCCEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CCCCcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 443 799999988884 68999999999998863
No 145
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=49.06 E-value=13 Score=34.25 Aligned_cols=33 Identities=12% Similarity=0.150 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
+||||.|+..+..|. .+|+.|+++||+|+++..
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 689999998887774 678999999999998854
No 146
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=48.77 E-value=23 Score=30.61 Aligned_cols=39 Identities=13% Similarity=0.193 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCCccCHHHHHH-HHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMID-TARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~-LA~~L~~rGH~Vt~~~~~ 46 (488)
+||||+++-....|+..-+.. +++.|.+.|++|.++-..
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 689998888777887666544 466677789999887554
No 147
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=48.76 E-value=12 Score=35.54 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=26.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
++|||+++..+..|. .+|..|+++||+|+++..
T Consensus 3 ~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 568999998776663 478889999999998854
No 148
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=48.73 E-value=16 Score=31.84 Aligned_cols=40 Identities=3% Similarity=-0.042 Sum_probs=22.2
Q ss_pred CCCCCEEEEEcCCCc-cCHHHHHH----HHHHHHHC--CCeEEEEeC
Q 011339 6 SCQQPHFVLFPFLAQ-GHMIPMID----TARLLAQH--GAAITIVTT 45 (488)
Q Consensus 6 ~~~~~kvl~~~~~~~-GHv~p~l~----LA~~L~~r--GH~Vt~~~~ 45 (488)
||.||||+++...-. |.-.-... +++.|.++ ||+|+++--
T Consensus 1 ~~mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL 47 (211)
T 3p0r_A 1 SNAMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDL 47 (211)
T ss_dssp ---CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEG
T ss_pred CcccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 467899988876544 23223333 34555555 888887743
No 149
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=48.39 E-value=19 Score=29.03 Aligned_cols=38 Identities=13% Similarity=0.230 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCccCHHHHH-HHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMI-DTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l-~LA~~L~~rGH~Vt~~~~~ 46 (488)
||||+++-...+|+..-+. .|++.|.++|++|.++...
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 5788888777888876544 3577777889999988654
No 150
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=48.33 E-value=12 Score=29.68 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=24.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+.|||+++.. |.+- ..+|+.|.++||+|+++...
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 4589998844 5543 35789999999999998653
No 151
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=47.71 E-value=1e+02 Score=30.39 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=28.5
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEE
Q 011339 108 LPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISF 147 (488)
Q Consensus 108 ~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~ 147 (488)
.++++++++ .+||++|.+.. ...+|+++|+|++.+
T Consensus 375 ~~l~~~i~~--~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 375 FDVHQWIKN--EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHH--SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHHh--cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 446777877 79999998854 577899999999975
No 152
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=47.69 E-value=13 Score=33.07 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++|||.|+..|..|- .||+.|+++||+|+.+..+
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 678999999998885 5899999999999987663
No 153
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=46.48 E-value=11 Score=30.01 Aligned_cols=34 Identities=15% Similarity=0.194 Sum_probs=24.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++.||+++..+..| ..+++.|.++|++|+++...
T Consensus 5 ~~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 45678888654333 46789999999999988653
No 154
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=45.97 E-value=31 Score=31.61 Aligned_cols=38 Identities=16% Similarity=0.085 Sum_probs=25.1
Q ss_pred CCCEEEEEc-CCCccCHHHH--HHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFP-FLAQGHMIPM--IDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~-~~~~GHv~p~--l~LA~~L~~rGH~Vt~~~~ 45 (488)
+.||||++- .|-..-++-. -.+.+.|.++||+|+++--
T Consensus 21 ~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 21 QSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp -CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 778996664 4544444443 2457788889999999843
No 155
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=45.78 E-value=1.1e+02 Score=25.80 Aligned_cols=140 Identities=14% Similarity=0.137 Sum_probs=77.8
Q ss_pred eEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHh---cCCCeEEecccchhhhhc
Q 011339 277 SVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERV---KGRGILILGWAPQVLILS 353 (488)
Q Consensus 277 ~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~nv~~~~~~pq~~ll~ 353 (488)
+.|-|-+||... ....+++...++.++..+-..+.+-.| .|+.+.+.. ....
T Consensus 22 ~~V~IimGS~SD--~~v~~~a~~~L~~~Gi~~dv~V~SaHR---------~p~~l~~~~~~a~~~g-------------- 76 (182)
T 1u11_A 22 PVVGIIMGSQSD--WETMRHADALLTELEIPHETLIVSAHR---------TPDRLADYARTAAERG-------------- 76 (182)
T ss_dssp CSEEEEESSGGG--HHHHHHHHHHHHHTTCCEEEEECCTTT---------CHHHHHHHHHHTTTTT--------------
T ss_pred CEEEEEECcHHH--HHHHHHHHHHHHHcCCCeEEEEEcccC---------CHHHHHHHHHHHHhCC--------------
Confidence 457788887775 445566677777788776665555543 344332211 1111
Q ss_pred cCCcccccccCCc----hhHHHHhhcCCCEeecCcccc-cchhHH--HHHHH--hcceE---EecccCCCCCCccccccc
Q 011339 354 HPSIGGFLTHCSW----NSSLEGISAGVPLITWPLYGD-QFWNEK--LIVQV--LNIGV---RIGVEVPLDFGEEEEIGV 421 (488)
Q Consensus 354 ~~~~~~~IthgG~----gs~~eal~~GvP~v~~P~~~D-Q~~na~--rv~e~--~G~G~---~l~~~~~~~~~~~~~~~~ 421 (488)
.++ +|.=+|. .++.-++ .-+|+|.+|.... -..... -+. + .|+.+ .+++. +
T Consensus 77 -~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~I~~a------------~ 139 (182)
T 1u11_A 77 -LNV--IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIV-QMPGGVPVGTLAIGAS------------G 139 (182)
T ss_dssp -CCE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSSHH------------H
T ss_pred -CcE--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCceEEEecCCc------------c
Confidence 122 6655554 2444444 5799999998542 111222 232 4 44542 12211 1
Q ss_pred ccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcC
Q 011339 422 LVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEET 463 (488)
Q Consensus 422 ~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~g 463 (488)
..++..++..|. -+.|+ .++++.+..++..++.+.+.
T Consensus 140 ~~nAallAaqIl-a~~d~----~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 140 AKNAALLAASIL-ALYNP----ALAARLETWRALQTASVPNS 176 (182)
T ss_dssp HHHHHHHHHHHH-GGGCH----HHHHHHHHHHHHHHHHSCSS
T ss_pred chHHHHHHHHHH-ccCCH----HHHHHHHHHHHHHHHHHHHh
Confidence 356666665554 34566 89999999999887765544
No 156
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=45.56 E-value=41 Score=34.29 Aligned_cols=51 Identities=12% Similarity=0.012 Sum_probs=42.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHh
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVAR 58 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~ 58 (488)
++.||++.+.++..|-....-++..|..+|++|.++....-.+.+......
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~~ 147 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKE 147 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH
Confidence 578999999999999999999999999999999998776555555444433
No 157
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=45.50 E-value=8.1 Score=37.00 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|+||+|+..|..| ..+|..|+++||+|+++...
T Consensus 15 M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 15 LNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 3499999888777 46799999999999998653
No 158
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=45.47 E-value=31 Score=27.27 Aligned_cols=37 Identities=14% Similarity=0.029 Sum_probs=26.7
Q ss_pred CEEE-EEcCCCccC--HHHHHHHHHHHHHCCCeE-EEEeCC
Q 011339 10 PHFV-LFPFLAQGH--MIPMIDTARLLAQHGAAI-TIVTTP 46 (488)
Q Consensus 10 ~kvl-~~~~~~~GH--v~p~l~LA~~L~~rGH~V-t~~~~~ 46 (488)
||++ +++.+.+|+ ....+.+|..+.+.||+| .++-..
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 4564 444455554 556788999999999999 887665
No 159
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=45.41 E-value=19 Score=31.05 Aligned_cols=29 Identities=7% Similarity=0.196 Sum_probs=23.6
Q ss_pred cccccccCCchhHHHHhhcCCCEeecCccc
Q 011339 357 IGGFLTHCSWNSSLEGISAGVPLITWPLYG 386 (488)
Q Consensus 357 ~~~~IthgG~gs~~eal~~GvP~v~~P~~~ 386 (488)
.+++|+.||........ .++|+|-++..+
T Consensus 52 ~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 52 VDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 33499999998888875 579999999854
No 160
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=45.33 E-value=13 Score=35.57 Aligned_cols=30 Identities=27% Similarity=0.215 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEE
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIV 43 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~ 43 (488)
.|||+++.-+--| +.+|..|+++||+|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 3799999877555 88899999999999998
No 161
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=45.12 E-value=19 Score=33.19 Aligned_cols=38 Identities=3% Similarity=-0.168 Sum_probs=28.4
Q ss_pred CCEEEEEcCCCccC---HHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGH---MIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GH---v~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
||||+++..+.... ......++++|.++||+|.++...
T Consensus 1 mm~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred CceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 47999999874221 234567999999999999988654
No 162
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=44.83 E-value=17 Score=33.19 Aligned_cols=32 Identities=6% Similarity=0.095 Sum_probs=25.8
Q ss_pred CCEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 9 QPHFVLFPF-LAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 9 ~~kvl~~~~-~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
||||+|+.. |..| ..+|+.|+++||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 479999987 7666 4678999999999997754
No 163
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=44.81 E-value=12 Score=32.86 Aligned_cols=34 Identities=12% Similarity=0.080 Sum_probs=27.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+||||+|+..+..| ..+|+.|++.||+|+++...
T Consensus 22 ~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 22 SMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECTT
T ss_pred cCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 57899999876655 46899999999999985443
No 164
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=44.69 E-value=16 Score=33.98 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
+||||.|+..+..| ..+|+.|+++||+|+++..
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 67999999877666 5789999999999998854
No 165
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=44.18 E-value=26 Score=30.80 Aligned_cols=40 Identities=18% Similarity=0.221 Sum_probs=24.5
Q ss_pred CCCCCEEEEEcC-CCc----cCHHHHH--HHHHHHHHCCCeEEEEeC
Q 011339 6 SCQQPHFVLFPF-LAQ----GHMIPMI--DTARLLAQHGAAITIVTT 45 (488)
Q Consensus 6 ~~~~~kvl~~~~-~~~----GHv~p~l--~LA~~L~~rGH~Vt~~~~ 45 (488)
|++||||+++.. |-. +-++-.+ .+++.|.+.||+|.++-.
T Consensus 22 ~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 22 SNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp --CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred cccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 458899977764 432 3344322 355666678999988754
No 166
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=44.11 E-value=39 Score=27.30 Aligned_cols=38 Identities=16% Similarity=0.158 Sum_probs=28.0
Q ss_pred CCEEE-EEcCCCccCHHH--HHHHHHHHHHCCCeE-EEEeCC
Q 011339 9 QPHFV-LFPFLAQGHMIP--MIDTARLLAQHGAAI-TIVTTP 46 (488)
Q Consensus 9 ~~kvl-~~~~~~~GHv~p--~l~LA~~L~~rGH~V-t~~~~~ 46 (488)
.||++ +++.+-+|+-.. .+.+|+++.+.||+| .++-..
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 47774 455567777665 567799999999999 777655
No 167
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=44.10 E-value=55 Score=32.16 Aligned_cols=43 Identities=5% Similarity=0.064 Sum_probs=36.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhH
Q 011339 11 HFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFK 53 (488)
Q Consensus 11 kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (488)
=+++...|+.|-..-.+.+|...+.+|..|.|++.+...+.+.
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql~ 241 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENI 241 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHHH
Confidence 3677788999999999999999999999999999986655443
No 168
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=43.74 E-value=37 Score=31.73 Aligned_cols=111 Identities=15% Similarity=0.115 Sum_probs=61.2
Q ss_pred CCEEEEEcCCCccCHHH----HHHHHHHHHHCCCeEEEEeCCcch-hhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCC
Q 011339 9 QPHFVLFPFLAQGHMIP----MIDTARLLAQHGAAITIVTTPANA-ARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEG 83 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p----~l~LA~~L~~rGH~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~ 83 (488)
||+++++.-...|.++| ++..|++|+ + +|+.++-.... +..+.....+ |.. +.+.+..+ .
T Consensus 1 ~m~~lv~~e~~~g~l~~~~~eal~aA~~La--~-~V~av~~G~~~~~~~~~a~~a~---GaD-kv~~v~d~--------~ 65 (315)
T 1efv_A 1 MQSTLVIAEHANDSLAPITLNTITAATRLG--G-EVSCLVAGTKCDKVAQDLCKVA---GIA-KVLVAQHD--------V 65 (315)
T ss_dssp -CEEEEECCEETTEECTHHHHHHHHHHTTT--S-EEEEEEEESCCHHHHHHHHHST---TCC-EEEEEECG--------G
T ss_pred CceEEEEEEccCCCcCHHHHHHHHHHHHhc--C-cEEEEEECCchHHHHHHHHHhc---CCC-EEEEecCc--------h
Confidence 57788888777787776 455555554 3 77765443222 2222221222 322 12332211 1
Q ss_pred CccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCc---chHHHHHhcCCCcEEEecc
Q 011339 84 CENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYP---WTVDTAARFNIPRISFHGF 150 (488)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~---~~~~~a~~lgiP~v~~~~~ 150 (488)
+.. ... ......+.++++. .+||+||+-.... .+..+|..|+.|.++..+.
T Consensus 66 l~~---~~~-----------~~~a~~La~li~~--~~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~~ 119 (315)
T 1efv_A 66 YKG---LLP-----------EELTPLILATQKQ--FNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIA 119 (315)
T ss_dssp GTT---CCH-----------HHHHHHHHHHHHH--HCCSEEEEESSHHHHHHHHHHHHHHTCCCEEEECE
T ss_pred hcc---CCH-----------HHHHHHHHHHHHh--cCCCEEEEcCCCCcchHHHHHHHHhCCCccccEEE
Confidence 100 000 1124455666666 5899999887543 4678999999999987554
No 169
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=43.62 E-value=38 Score=30.04 Aligned_cols=22 Identities=18% Similarity=0.107 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHCCCeEEEEeCC
Q 011339 25 PMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 25 p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.-.++|++|+++|++|+++..+
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467899999999999999887
No 170
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=43.56 E-value=26 Score=31.71 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++|||+++. + |-+ -..|+++|.++||+|+.++-.
T Consensus 2 ~~~~ilVtG--a-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAG--C-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEEC--C-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEEC--C-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 567888884 4 643 457899999999999998764
No 171
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=43.15 E-value=22 Score=30.85 Aligned_cols=35 Identities=20% Similarity=0.164 Sum_probs=25.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+||||+++. +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 3 ~m~~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 3 KVKKIVLIG--ASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCCEEEEET--CCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CCCEEEEEc--CCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 467887764 344333 57899999999999988664
No 172
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=42.84 E-value=19 Score=35.35 Aligned_cols=26 Identities=8% Similarity=-0.116 Sum_probs=20.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGA 38 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH 38 (488)
.||||+++..++. -.+||+.|++.+.
T Consensus 2 ~~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp -CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CCcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 5799999988754 4468999998865
No 173
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=42.79 E-value=20 Score=33.33 Aligned_cols=33 Identities=12% Similarity=0.150 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
.|.||.|+-.+..|. ++|+.|.++||+|++.--
T Consensus 2 ~M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CcCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 467899999998884 689999999999998843
No 174
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=42.74 E-value=29 Score=30.67 Aligned_cols=39 Identities=8% Similarity=0.030 Sum_probs=30.5
Q ss_pred CCCCCEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEe
Q 011339 6 SCQQPHFVLFPF-LAQGHMIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 6 ~~~~~kvl~~~~-~~~GHv~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
|++|..|++... +.-|-..-...|++.|+++|++|.++=
T Consensus 1 ~~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 1 SNAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp CTTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 445545555554 588889999999999999999999873
No 175
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=42.68 E-value=64 Score=31.51 Aligned_cols=32 Identities=9% Similarity=0.076 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.||+++.. | ...+.+++++++.|++|+++.+.
T Consensus 2 k~ilI~g~---g--~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIANR---G--EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp CEEEECCC---H--HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred ceEEEeCC---C--HHHHHHHHHHHHcCCEEEEEecc
Confidence 46777653 2 24668899999999999988654
No 176
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=42.07 E-value=28 Score=31.83 Aligned_cols=40 Identities=10% Similarity=0.138 Sum_probs=31.9
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 8 QQPHFVLFPF--LAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 8 ~~~kvl~~~~--~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
+|+|++.+.. ++-|-..-...||..|+++|++|.++-...
T Consensus 2 ~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 2 AETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp --CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 5677766654 688888999999999999999999986654
No 177
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=41.65 E-value=21 Score=31.15 Aligned_cols=43 Identities=14% Similarity=0.056 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeCCcchhh
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQ-HGAAITIVTTPANAAR 51 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~ 51 (488)
++.||++...++.+=+ -...|.++|.+ +|++|.++.++.-...
T Consensus 18 ~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~f 61 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHF 61 (206)
T ss_dssp SSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGS
T ss_pred CCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHH
Confidence 4568888888887744 46999999999 8999999999854433
No 178
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=41.29 E-value=47 Score=25.25 Aligned_cols=39 Identities=13% Similarity=0.171 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|+||+++|..+.|--.-.-.+=+.+.++|.++.+...+
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 567899999887776666667888888899998776544
No 179
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=41.27 E-value=18 Score=31.93 Aligned_cols=38 Identities=11% Similarity=0.002 Sum_probs=32.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
|||+|..-|+-|=..-...||..|+++|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 68988767888889999999999999999999985543
No 180
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=41.08 E-value=59 Score=25.77 Aligned_cols=48 Identities=13% Similarity=-0.005 Sum_probs=34.5
Q ss_pred cCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHcc
Q 011339 375 AGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDE 438 (488)
Q Consensus 375 ~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~ 438 (488)
..+|+|++--..+ ....... -+.|+--.+.+. ++.++|.++|++++..
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~-~~~g~~~~l~kP--------------~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQA-IQDGAYDFIAKP--------------FAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHH-HHTTCCEEEESS--------------CCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHH-HhcCCCeEEeCC--------------CCHHHHHHHHHHHHHH
Confidence 4788888755444 3455555 377876667654 8999999999999864
No 181
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=40.64 E-value=1.8e+02 Score=28.31 Aligned_cols=43 Identities=19% Similarity=0.140 Sum_probs=35.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeCCcchhhhH
Q 011339 11 HFVLFPFLAQGHMIPMIDTARLLAQ-HGAAITIVTTPANAARFK 53 (488)
Q Consensus 11 kvl~~~~~~~GHv~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~~~ 53 (488)
=+++...|+.|-..-++.+|...+. .|..|.|++.+.....+.
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l~ 245 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQLT 245 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHH
Confidence 3577778999999999999999887 489999999986655443
No 182
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=40.13 E-value=51 Score=29.26 Aligned_cols=39 Identities=8% Similarity=0.132 Sum_probs=29.0
Q ss_pred CCCEEEEEcCCCcc-----------CHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQG-----------HMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~G-----------Hv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|+||+++.....+ ...=+....+.|.+.|++|+++++.
T Consensus 2 ~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~ 51 (243)
T 1rw7_A 2 APKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSET 51 (243)
T ss_dssp CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 35689988875322 3355777788899999999999875
No 183
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=40.02 E-value=29 Score=29.56 Aligned_cols=38 Identities=13% Similarity=0.306 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCCccCHHHHHH-HHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMID-TARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~-LA~~L~~rGH~Vt~~~~~ 46 (488)
+||||+++... .|+..-+.. +++.|.+.|++|.++...
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 57899988888 887665544 455666679999888554
No 184
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=39.85 E-value=28 Score=27.13 Aligned_cols=39 Identities=13% Similarity=-0.007 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCccCH--HHHHHHHHHHHHCC--CeEEEEeCCc
Q 011339 9 QPHFVLFPFLAQGHM--IPMIDTARLLAQHG--AAITIVTTPA 47 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv--~p~l~LA~~L~~rG--H~Vt~~~~~~ 47 (488)
.+|++|+.+...-.. +..+..|...+++| |+|.++....
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGA 49 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECC
Confidence 389988877643333 34677899999999 8999997763
No 185
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=39.79 E-value=52 Score=29.44 Aligned_cols=39 Identities=10% Similarity=0.046 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCcc----------C-HHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQG----------H-MIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~G----------H-v~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|.||+++...+.+ - ..=++.-...|.+.|++|+++++.
T Consensus 8 ~mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 8 LPRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CCSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36789988876422 1 444777788999999999999875
No 186
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=39.71 E-value=36 Score=27.53 Aligned_cols=96 Identities=13% Similarity=0.147 Sum_probs=57.2
Q ss_pred EEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCccccCCCc
Q 011339 13 VLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCENFDMLHS 92 (488)
Q Consensus 13 l~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~ 92 (488)
+|++.. ..+=.-++.+|+.|.+.|+++ +++......+++. |+....+.. ..++-.
T Consensus 27 vliSv~-d~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~~---------Gi~v~~v~k------~~egg~------- 81 (143)
T 2yvq_A 27 ILIGIQ-QSFRPRFLGVAEQLHNEGFKL--FATEATSDWLNAN---------NVPATPVAW------PSQEGQ------- 81 (143)
T ss_dssp EEEECC-GGGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHHT---------TCCCEEECC------GGGC---------
T ss_pred EEEEec-ccchHHHHHHHHHHHHCCCEE--EECchHHHHHHHc---------CCeEEEEEe------ccCCCc-------
Confidence 455543 345667899999999999974 3333334444332 565554431 111100
Q ss_pred hhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC--------cchHHHHHhcCCCcEE
Q 011339 93 TDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY--------PWTVDTAARFNIPRIS 146 (488)
Q Consensus 93 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~--------~~~~~~a~~lgiP~v~ 146 (488)
......+.+.+++ .+.|+||...-. +.-...|-.++||+++
T Consensus 82 -----------~~~~~~i~d~i~~--g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 82 -----------NPSLSSIRKLIRD--GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp --------------CBCHHHHHHT--TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred -----------ccccccHHHHHHC--CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0001346677888 899999986643 1345578889999986
No 187
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=39.67 E-value=50 Score=28.71 Aligned_cols=41 Identities=5% Similarity=0.016 Sum_probs=27.9
Q ss_pred CCCC-CEEEEEcCC---------CccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 6 SCQQ-PHFVLFPFL---------AQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 6 ~~~~-~kvl~~~~~---------~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|++| .||+|+... ..-...=+....+.|.+.|++|++++..
T Consensus 1 ~~~m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~ 51 (224)
T 1u9c_A 1 SNAMSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQ 51 (224)
T ss_dssp ---CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCC
Confidence 3466 589888772 2223355677788899999999999875
No 188
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=39.49 E-value=52 Score=34.14 Aligned_cols=39 Identities=13% Similarity=0.009 Sum_probs=25.8
Q ss_pred HHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEEecc
Q 011339 110 LENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISFHGF 150 (488)
Q Consensus 110 l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~~~~ 150 (488)
+.+.+++ .+||+||+-.|. .-...+-......++-++++
T Consensus 67 ~~~~l~~--~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 67 WVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHH--HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHh--cCCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 4455666 699999987763 34555666666666766655
No 189
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=39.42 E-value=29 Score=32.18 Aligned_cols=32 Identities=19% Similarity=0.011 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|||+++..|+.|- .+|..|+ .||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 37999999888885 5788899 99999999875
No 190
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=39.39 E-value=34 Score=24.27 Aligned_cols=50 Identities=20% Similarity=0.188 Sum_probs=30.5
Q ss_pred cCCCEeecCcccccch-hHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHc
Q 011339 375 AGVPLITWPLYGDQFW-NEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMD 437 (488)
Q Consensus 375 ~GvP~v~~P~~~DQ~~-na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~ 437 (488)
+|.|++++--.+.|.+ |-..- |...-|+..+.- ..-++++|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqn-eakkegvsydvl------------kstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQN-EAKKEGVSYDVL------------KSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHH-HHHHHTCEEEEE------------ECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHH-HHHhcCcchhhh------------ccCCHHHHHHHHHHHHH
Confidence 6788877766665554 32222 233334444432 14789999999998874
No 191
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=38.98 E-value=18 Score=34.20 Aligned_cols=41 Identities=12% Similarity=0.020 Sum_probs=27.7
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCC-eEEEEeCC
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGA-AITIVTTP 46 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH-~Vt~~~~~ 46 (488)
|+-.|..++|||.++..+..|.. +|..|+..|| +|+++-..
T Consensus 1 ~~~~~~~~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 1 MAPALVQRRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVV 42 (331)
T ss_dssp --CCCCSCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSS
T ss_pred CCcCcCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECC
Confidence 34333336789999976554433 8899999999 98887554
No 192
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=38.62 E-value=21 Score=32.67 Aligned_cols=32 Identities=19% Similarity=0.184 Sum_probs=25.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
.||||+|+..+..|. .+|+.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 468999998877775 47888999999998765
No 193
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=38.47 E-value=23 Score=31.91 Aligned_cols=39 Identities=18% Similarity=0.186 Sum_probs=33.0
Q ss_pred CCCEEEEEcCC---CccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFL---AQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~---~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.+||.+|++.+ +.|--.-..+|+..|..||++||.+-..
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiD 62 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEE
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecC
Confidence 46899999965 7777888999999999999999987544
No 194
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=38.31 E-value=20 Score=35.25 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=26.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++|||.++..|..| +.+|..|++ ||+|+.+...
T Consensus 35 ~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 35 EFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 67999999887666 356778887 9999988543
No 195
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=38.26 E-value=23 Score=30.74 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=26.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.+|||.++..+..| ..+|+.|+++||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 57899999876666 56789999999999988543
No 196
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=38.22 E-value=1.1e+02 Score=30.44 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCc-c
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCE-N 86 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~-~ 86 (488)
++||-+|++. .+=.-++.+|+.|.+.|++|. ++.-....+++. |+....+.. ..+.|+-.. +
T Consensus 8 ~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~---vTgfPEil~GR 70 (523)
T 3zzm_A 8 RPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQ---LTGFPEVLDGR 70 (523)
T ss_dssp CCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHH---HHSCCCCTTTT
T ss_pred ccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccc---cCCCchhhCCc
Confidence 5566666666 345568999999999999864 444444444433 666554420 024444332 1
Q ss_pred ccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHH
Q 011339 87 FDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTA 137 (488)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a 137 (488)
..++.. ....-+.. -+...+.+.++-+..-.+.|+||++.+ ++-..++
T Consensus 71 VKTLHP-~ihgGiLa-~r~~~~h~~~l~~~~i~~iDlVvvNLY-PF~~tv~ 118 (523)
T 3zzm_A 71 VKTLHP-RVHAGLLA-DLRKSEHAAALEQLGIEAFELVVVNLY-PFSQTVE 118 (523)
T ss_dssp SSSCSH-HHHHHHHC-CTTSHHHHHHHHHHTCCCCSEEEEECC-CHHHHHH
T ss_pred cccCCc-hhhhhhcc-CCCCHHHHHHHHHCCCCceeEEEEeCC-ChHHHHh
Confidence 222221 11111111 012233333333332368999999955 4333343
No 197
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=38.19 E-value=21 Score=32.66 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|+||.|+..+..|. .+|+.|+++||+|+++...
T Consensus 1 M~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 1 MTTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHHHHTCCEEEECSS
T ss_pred CCeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcCC
Confidence 56899998887774 5789999999999988543
No 198
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=37.86 E-value=23 Score=33.08 Aligned_cols=36 Identities=6% Similarity=-0.042 Sum_probs=28.1
Q ss_pred EEEEcCCCccCH--------------HHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 12 FVLFPFLAQGHM--------------IPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 12 vl~~~~~~~GHv--------------~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
|++++.|+.=.+ ..-.++|+++.++|++|++++.+.
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 677777775555 256789999999999999998764
No 199
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=37.85 E-value=22 Score=32.33 Aligned_cols=32 Identities=13% Similarity=-0.026 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|||+|+..|..| ..+|..|+++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 589998877666 36899999999999998654
No 200
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=37.79 E-value=70 Score=26.21 Aligned_cols=94 Identities=13% Similarity=0.072 Sum_probs=59.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCcchhhhHH-HHHhhhcCCCCeEEEEeeCCccccCCCCCCcc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTPANAARFKT-VVARAMQSGLPLQLIEIQFPYQEAGVPEGCEN 86 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~ 86 (488)
++|++.. ...+=.-++.+|++|++. ||++. ++......+++ . |+....+. ..+++
T Consensus 12 g~V~lsv--~D~dK~~~v~~ak~~~~ll~Gf~l~--AT~gTa~~L~e~~---------Gl~v~~v~------k~~eG--- 69 (152)
T 1b93_A 12 KHIALVA--HDHCKQMLMSWVERHQPLLEQHVLY--ATGTTGNLISRAT---------GMNVNAML------SGPMG--- 69 (152)
T ss_dssp CEEEEEE--CGGGHHHHHHHHHHTHHHHTTSEEE--EETTHHHHHHHHH---------CCCCEEEC------CGGGT---
T ss_pred CEEEEEE--ehhhHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHHh---------CceeEEEE------ecCCC---
Confidence 4565553 344556689999999999 99743 44444455544 3 55544331 11111
Q ss_pred ccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCC--Cc-c-------hHHHHHhcCCCcEE
Q 011339 87 FDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTC--YP-W-------TVDTAARFNIPRIS 146 (488)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~--~~-~-------~~~~a~~lgiP~v~ 146 (488)
-...+.+.+++ .+.|+||...- .. . -..+|-..+||+++
T Consensus 70 -------------------G~p~I~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 70 -------------------GDQQVGALISE--GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp -------------------HHHHHHHHHHT--TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred -------------------CCchHHHHHHC--CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 13457778888 89999997554 22 1 35688889999986
No 201
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=37.73 E-value=30 Score=32.11 Aligned_cols=33 Identities=3% Similarity=0.035 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
+|||+++..+ -...+++++.++||+|.++....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 3689998876 46789999999999999987763
No 202
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=37.63 E-value=21 Score=33.46 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=27.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++.||.|+..|..| .++|..|+++||+|+++...
T Consensus 5 ~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 5 AAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 67899999887777 47899999999999998554
No 203
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=37.25 E-value=44 Score=28.54 Aligned_cols=37 Identities=8% Similarity=-0.107 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCccCH----HHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHM----IPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv----~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
.+|+|.+++... +.- .-...|++.|+++|+.|.+-..
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG 52 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGG 52 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 458999998765 443 3467788888999998877653
No 204
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=37.23 E-value=1.1e+02 Score=28.58 Aligned_cols=102 Identities=12% Similarity=0.069 Sum_probs=58.4
Q ss_pred CEEEEEcCCCcc--C--HHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCc
Q 011339 10 PHFVLFPFLAQG--H--MIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCE 85 (488)
Q Consensus 10 ~kvl~~~~~~~G--H--v~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~ 85 (488)
.-|++.+..+.. . ..-+..|++.|.++|++|.++..+...+..++..... +-..+.+ ..
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~-----~~~~~~l---------~g--- 248 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM-----ETKPIVA---------TG--- 248 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC-----SSCCEEC---------TT---
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc-----ccccEEe---------eC---
Confidence 345666554332 2 2348999999999999998877665444433332211 0001110 00
Q ss_pred cccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEecchH
Q 011339 86 NFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFHGFSC 152 (488)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~~~~~ 152 (488)
.. ...++..+++. -|++|+-- .+...+|..+|+|+|.++..+.
T Consensus 249 ----~~--------------sl~e~~ali~~----a~~~i~~D--sG~~HlAaa~g~P~v~lfg~t~ 291 (349)
T 3tov_A 249 ----KF--------------QLGPLAAAMNR----CNLLITND--SGPMHVGISQGVPIVALYGPSN 291 (349)
T ss_dssp ----CC--------------CHHHHHHHHHT----CSEEEEES--SHHHHHHHTTTCCEEEECSSCC
T ss_pred ----CC--------------CHHHHHHHHHh----CCEEEECC--CCHHHHHHhcCCCEEEEECCCC
Confidence 00 12344555544 68888632 3567789999999999876543
No 205
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=37.19 E-value=25 Score=30.19 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|||+++. +.|.+= ..|+++|.++||+|+.++-.
T Consensus 1 MkvlVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIG--ATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEc--CCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 5776664 334332 57899999999999988764
No 206
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=37.09 E-value=18 Score=28.92 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+.||+++..+..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4678888775554 47899999999999999764
No 207
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=36.99 E-value=13 Score=32.46 Aligned_cols=32 Identities=9% Similarity=0.058 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|||+++..+.. -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~G~~-----G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETT-----AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHH-----HHHHHHHHHhCCCeEEEEECC
Confidence 57888765333 457899999999999999754
No 208
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=36.86 E-value=14 Score=39.03 Aligned_cols=121 Identities=11% Similarity=0.073 Sum_probs=79.0
Q ss_pred ecccchhhhhccCCcccccccCCchhHHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccc
Q 011339 343 LGWAPQVLILSHPSIGGFLTHCSWNSSLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVL 422 (488)
Q Consensus 343 ~~~~pq~~ll~~~~~~~~IthgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~ 422 (488)
.++.+-.++|..+++ +||=-. +.+.|.+..++|+|....-.|++.+. ..| ...+..+.+ +|. .-
T Consensus 604 ~~~~di~~ll~~aD~--lITDyS-Sv~fD~~~l~kPiif~~~D~~~Y~~~-----~rg--~y~d~~~~~----pg~--~~ 667 (729)
T 3l7i_A 604 SNYNDVSELFLISDC--LITDYS-SVMFDYGILKRPQFFFAYDIDKYDKG-----LRG--FYMNYMEDL----PGP--IY 667 (729)
T ss_dssp TTCSCHHHHHHTCSE--EEESSC-THHHHHGGGCCCEEEECTTTTTTTSS-----CCS--BSSCTTSSS----SSC--EE
T ss_pred CCCcCHHHHHHHhCE--EEeech-HHHHhHHhhCCCEEEecCCHHHHhhc-----cCC--cccChhHhC----CCC--eE
Confidence 345566789999998 999743 56779999999999887655554321 122 222221100 000 13
Q ss_pred cCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCCC
Q 011339 423 VKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRATEETRSSSLMIKLLIQDIMQQPHG 483 (488)
Q Consensus 423 ~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~i~~~~~~~~~ 483 (488)
-+.++|.++|.+...+. +.++++.+++.+.+-.. ++|.++...++.+++....+..+
T Consensus 668 ~~~~eL~~~i~~~~~~~---~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~~~~~ 724 (729)
T 3l7i_A 668 TEPYGLAKELKNLDKVQ---QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKEQLEH 724 (729)
T ss_dssp SSHHHHHHHHTTHHHHH---HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHHHCC-
T ss_pred CCHHHHHHHHhhhhccc---hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcCcccc
Confidence 68899999998877532 27888888888887654 67878777777777776654433
No 209
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=36.78 E-value=21 Score=34.06 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=29.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.+|||.|+..+..|. .+|..|+++||+|++....
T Consensus 28 ~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 468999999888874 6899999999999998764
No 210
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=36.11 E-value=25 Score=33.04 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=28.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|||.|+..+..| ..+|..|++.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 4899999888777 57899999999999998653
No 211
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=36.03 E-value=60 Score=28.10 Aligned_cols=47 Identities=9% Similarity=-0.067 Sum_probs=33.2
Q ss_pred hhhcccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEE
Q 011339 265 ECLNWLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWV 311 (488)
Q Consensus 265 ~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~ 311 (488)
-+.+|+.+...+.++||..+|......+.+..+.++++..+..+.+.
T Consensus 17 ~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 17 LFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 34556644445679999988776545567788889999998876543
No 212
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=35.62 E-value=20 Score=33.04 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.++||+++. +.|.+ -..|+++|.++||+|+.++-.
T Consensus 6 ~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 6 LKHRILITG--GAGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp -CCEEEEET--TTSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCCeEEEEC--CCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 467777764 34433 247899999999999988654
No 213
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=35.56 E-value=39 Score=29.92 Aligned_cols=39 Identities=15% Similarity=0.150 Sum_probs=30.9
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 9 QPHFVLFPF--LAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 9 ~~kvl~~~~--~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
|+|++.+.. ++-|-..-...||..|+++|++|.++-...
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 456766644 578888889999999999999999986553
No 214
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=35.55 E-value=50 Score=29.53 Aligned_cols=38 Identities=16% Similarity=0.271 Sum_probs=25.8
Q ss_pred CCCEEEEEcCCCc--cCHHHHHH-HHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQ--GHMIPMID-TARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~--GHv~p~l~-LA~~L~~rGH~Vt~~~~ 45 (488)
.||||+++..... |...-++. +++.|.+.|++|.++-.
T Consensus 33 ~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 33 HRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp SCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 6789988876543 44444444 56666677999988754
No 215
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=35.41 E-value=33 Score=26.90 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=23.5
Q ss_pred HHHHhcCCCCeEEEEcCCCc--chHHHHHhc---CCCcEEE
Q 011339 112 NLLKELTPKPSCIVSDTCYP--WTVDTAARF---NIPRISF 147 (488)
Q Consensus 112 ~~l~~~~~~pD~vv~D~~~~--~~~~~a~~l---giP~v~~ 147 (488)
+++++ .+||+||.|...+ .+..+++.+ ++|++.+
T Consensus 47 ~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 47 DIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 34556 6999999999765 455555544 6887664
No 216
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=35.40 E-value=43 Score=29.20 Aligned_cols=39 Identities=10% Similarity=0.063 Sum_probs=30.8
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 9 QPHFVLFPF--LAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 9 ~~kvl~~~~--~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
|+|++.+.. ++-|-..-...||..|+++|++|.++-...
T Consensus 1 M~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 345655543 578888889999999999999999996653
No 217
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=35.04 E-value=39 Score=29.64 Aligned_cols=45 Identities=13% Similarity=-0.016 Sum_probs=33.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHH-HHCCCeEEEEeCCcchhhhHHH
Q 011339 11 HFVLFPFLAQGHMIPMIDTARLL-AQHGAAITIVTTPANAARFKTV 55 (488)
Q Consensus 11 kvl~~~~~~~GHv~p~l~LA~~L-~~rGH~Vt~~~~~~~~~~~~~~ 55 (488)
=+++...|+.|-..-.+.+|... .+.|..|.|++.+...+.+...
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~~ 77 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRRE 77 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHHH
Confidence 35777789999999999987664 5568899999988666555443
No 218
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=34.77 E-value=43 Score=25.57 Aligned_cols=39 Identities=8% Similarity=-0.015 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+.|||+++|..+.|+-.-.-.+-+.+.++|.++.+-+.+
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~ 41 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIA 41 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 458999999999898855666777777889887654433
No 219
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=34.65 E-value=2.2e+02 Score=24.55 Aligned_cols=104 Identities=11% Similarity=0.081 Sum_probs=55.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-cchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCc
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTTP-ANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCE 85 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~ 85 (488)
|+||+++..+. |+ .+.+|.++..+. ..+|..+.+. .... +...... .++.+..++ +..+
T Consensus 2 m~riavl~Sg~-Gs--nl~ali~~~~~~~l~~eI~~Visn~~~a~-v~~~A~~-----~gIp~~~~~--------~~~~- 63 (211)
T 3p9x_A 2 MKRVAIFASGS-GT--NAEAIIQSQKAGQLPCEVALLITDKPGAK-VVERVKV-----HEIPVCALD--------PKTY- 63 (211)
T ss_dssp -CEEEEECCTT-CH--HHHHHHHHHHTTCCSSEEEEEEESCSSSH-HHHHHHT-----TTCCEEECC--------GGGS-
T ss_pred CCEEEEEEeCC-ch--HHHHHHHHHHcCCCCcEEEEEEECCCCcH-HHHHHHH-----cCCCEEEeC--------hhhc-
Confidence 68999888875 43 356666665443 2577766553 2222 2222122 266665543 1110
Q ss_pred cccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 86 NFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
.. -.....++.+.+++ .+||+||+-.+. .-...+-......++-+
T Consensus 64 -----~~----------r~~~d~~~~~~l~~--~~~Dliv~agy~~Il~~~~l~~~~~~~iNi 109 (211)
T 3p9x_A 64 -----PS----------KEAYEIEVVQQLKE--KQIDFVVLAGYMRLVGPTLLGAYEGRIVNI 109 (211)
T ss_dssp -----SS----------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHHHTTSEEEE
T ss_pred -----Cc----------hhhhHHHHHHHHHh--cCCCEEEEeCchhhcCHHHHhhccCCeEEE
Confidence 00 01123466777888 899999988764 34444555555455554
No 220
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=34.41 E-value=29 Score=29.88 Aligned_cols=33 Identities=12% Similarity=0.098 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|||+++. +.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLG--ATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 5766654 344442 57899999999999998764
No 221
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=34.37 E-value=21 Score=33.24 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=26.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCC-eEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGA-AITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH-~Vt~~~~ 45 (488)
++|||.|+..+..| ..+|+.|+++|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 67899999887766 478999999999 9998865
No 222
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=34.36 E-value=39 Score=29.75 Aligned_cols=40 Identities=10% Similarity=-0.078 Sum_probs=23.7
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|+.. .+.|+++++..+.| =-..+|++|+++|++|+++.-.
T Consensus 1 M~~~---~~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 1 MAAS---GEARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp --------CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCcc---CCCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 5544 33455556554432 2357899999999999887653
No 223
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=34.05 E-value=49 Score=26.29 Aligned_cols=42 Identities=19% Similarity=0.254 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhc-------CCCcEEEecch
Q 011339 108 LPLENLLKELTPKPSCIVSDTCYP--WTVDTAARF-------NIPRISFHGFS 151 (488)
Q Consensus 108 ~~l~~~l~~~~~~pD~vv~D~~~~--~~~~~a~~l-------giP~v~~~~~~ 151 (488)
.+..+.+++ .+||+||.|...+ -|..+++.+ .+|++.++...
T Consensus 47 ~~al~~~~~--~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 47 LTALPMLKK--GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHHHh--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
No 224
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=33.81 E-value=28 Score=26.31 Aligned_cols=34 Identities=15% Similarity=0.065 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCC-CeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHG-AAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rG-H~Vt~~~~~ 46 (488)
.++||+++..+..| ..+++.|.++| |+|+++...
T Consensus 4 ~~~~v~I~G~G~iG-----~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIG-----QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHH-----HHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECCCHHH-----HHHHHHHHhCCCceEEEEeCC
Confidence 45678877543333 46789999999 999887654
No 225
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=33.54 E-value=1.1e+02 Score=29.97 Aligned_cols=33 Identities=27% Similarity=0.423 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
+..||+|+..+..| +++|+.|+++||+|+..-.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 56799999887655 2469999999999999855
No 226
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=33.49 E-value=2.1e+02 Score=23.97 Aligned_cols=149 Identities=15% Similarity=0.095 Sum_probs=77.0
Q ss_pred CeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccC
Q 011339 276 NSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHP 355 (488)
Q Consensus 276 ~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~ 355 (488)
+|+|-|-+||... ....+++.+.++.++..+-..+..-.|.+..+.+ +.......++.
T Consensus 22 kp~V~IimGS~SD--~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~------~~~~a~~~g~~-------------- 79 (181)
T 4b4k_A 22 KSLVGVIMGSTSD--WETMKYACDILDELNIPYEKKVVSAHRTPDYMFE------YAETARERGLK-------------- 79 (181)
T ss_dssp CCSEEEEESSGGG--HHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHH------HHHHTTTTTCC--------------
T ss_pred CccEEEEECCHhH--HHHHHHHHHHHHHcCCCeeEEEEccccChHHHHH------HHHHHHhcCce--------------
Confidence 4678899998876 4556777788888888776666555533322221 11111122222
Q ss_pred CcccccccCCch----hHHHHhhcCCCEeecCcccc---cchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHH
Q 011339 356 SIGGFLTHCSWN----SSLEGISAGVPLITWPLYGD---QFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDV 428 (488)
Q Consensus 356 ~~~~~IthgG~g----s~~eal~~GvP~v~~P~~~D---Q~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l 428 (488)
++|.=+|.- ++.- -..-+|+|.+|.... ..+.-.-++ +.--|+-+-+-. -++.+..++.-+
T Consensus 80 ---ViIa~AG~aahLpGvvA-a~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTva-------ig~~ga~NAall 147 (181)
T 4b4k_A 80 ---VIIAGAGGAAHLPGMVA-AKTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVA-------IGKAGSTNAGLL 147 (181)
T ss_dssp ---EEEEEECSSCCHHHHHH-TTCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEECC-------SSHHHHHHHHHH
T ss_pred ---EEEEeccccccchhhHH-hcCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEEe-------cCCccHHHHHHH
Confidence 255555532 3333 345689999998543 233233332 333343332210 000001223334
Q ss_pred HHHHHHHHccCcchHHHHHHHHHHHHHHHHHHhcC
Q 011339 429 VKAINILMDEGGETDDRRKRAREFQIMAKRATEET 463 (488)
Q Consensus 429 ~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~~~g 463 (488)
+..|.. +.|+ .++++.+..++..++.+++.
T Consensus 148 A~qILa-~~d~----~l~~kl~~~r~~~~~~v~~~ 177 (181)
T 4b4k_A 148 AAQILG-SFHD----DIHDALELRREAIEKDVREG 177 (181)
T ss_dssp HHHHHT-TTCH----HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHc-cCCH----HHHHHHHHHHHHHHHHHHHh
Confidence 333322 3455 88888888888877665543
No 227
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=32.99 E-value=1.6e+02 Score=25.82 Aligned_cols=152 Identities=13% Similarity=0.006 Sum_probs=74.9
Q ss_pred ccCCCCCCeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccch
Q 011339 269 WLDSWPPNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQ 348 (488)
Q Consensus 269 ~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq 348 (488)
|++-. .++++.|..|.++ ...+..+...+..+.+.-. .. ...+.+ .....++......-+
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap-~~--~~~l~~---------l~~~~~i~~i~~~~~ 85 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAP-TV--SAEINE---------WEAKGQLRVKRKKVG 85 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECS-SC--CHHHHH---------HHHTTSCEEECSCCC
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECC-CC--CHHHHH---------HHHcCCcEEEECCCC
Confidence 44443 4568888777433 2334555566777665533 22 112222 222344444332223
Q ss_pred hhhhccCCcccccccCCchhHHHHhh----cCCCEeecCcccccchh-----HHHHHHHhcceEEecccCCCCCCccccc
Q 011339 349 VLILSHPSIGGFLTHCSWNSSLEGIS----AGVPLITWPLYGDQFWN-----EKLIVQVLNIGVRIGVEVPLDFGEEEEI 419 (488)
Q Consensus 349 ~~ll~~~~~~~~IthgG~gs~~eal~----~GvP~v~~P~~~DQ~~n-----a~rv~e~~G~G~~l~~~~~~~~~~~~~~ 419 (488)
...|..+++ +|.--|.-.+.+.++ .|+|+-++ |.+.. -..+ ++-++-+.+.+.. +
T Consensus 86 ~~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv-~rg~l~iaIST~G---------~ 149 (223)
T 3dfz_A 86 EEDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQF-SRGRLSLAISTDG---------A 149 (223)
T ss_dssp GGGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEE-EETTEEEEEECTT---------S
T ss_pred HhHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEE-EeCCEEEEEECCC---------C
Confidence 445666666 887777665555444 45554332 33222 2223 2333444444431 0
Q ss_pred ccccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHH
Q 011339 420 GVLVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRA 459 (488)
Q Consensus 420 ~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~ 459 (488)
+ -.-+..|++.|.+.+. .....+-+.+.++++.+++.
T Consensus 150 s-P~la~~iR~~ie~~lp--~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 150 S-PLLTKRIKEDLSSNYD--ESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp C-HHHHHHHHHHHHHHSC--THHHHHHHHHHHHHHHHHHC
T ss_pred C-cHHHHHHHHHHHHHcc--HHHHHHHHHHHHHHHHHHHH
Confidence 0 1234556667766663 33446777788888887754
No 228
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=32.88 E-value=2.2e+02 Score=23.82 Aligned_cols=144 Identities=14% Similarity=0.077 Sum_probs=72.9
Q ss_pred eEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEEecccchhhhhccCC
Q 011339 277 SVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILILGWAPQVLILSHPS 356 (488)
Q Consensus 277 ~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~ 356 (488)
|.|-|-+||... ....+++...++.++..+-..+.+-.| .|+.+.+... . .--...+
T Consensus 8 ~~V~IimgS~SD--~~v~~~a~~~L~~~gi~~ev~V~SaHR---------~p~~~~~~~~-----------~-a~~~g~~ 64 (174)
T 3lp6_A 8 PRVGVIMGSDSD--WPVMADAAAALAEFDIPAEVRVVSAHR---------TPEAMFSYAR-----------G-AAARGLE 64 (174)
T ss_dssp CSEEEEESCGGG--HHHHHHHHHHHHHTTCCEEEEECCTTT---------CHHHHHHHHH-----------H-HHHHTCC
T ss_pred CeEEEEECcHHh--HHHHHHHHHHHHHcCCCEEEEEECCCC---------CHHHHHHHHH-----------H-HHhCCCC
Confidence 457777887775 445566777777788776665555543 3332221100 0 0001122
Q ss_pred cccccccCCch----hHHHHhhcCCCEeecCcccccc-hhHHHHH-HHhcceEEecccCCCCCCcccccccccCHHHHHH
Q 011339 357 IGGFLTHCSWN----SSLEGISAGVPLITWPLYGDQF-WNEKLIV-QVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVK 430 (488)
Q Consensus 357 ~~~~IthgG~g----s~~eal~~GvP~v~~P~~~DQ~-~na~rv~-e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 430 (488)
+ +|.=+|.. ++.-++ .-.|+|.+|...... .....+. -+.--|+-+-.- .+++..++..++.
T Consensus 65 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV---------~I~~~~nAa~lAa 132 (174)
T 3lp6_A 65 V--IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATV---------SIGGAGNAGLLAV 132 (174)
T ss_dssp E--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEEC---------CTTCHHHHHHHHH
T ss_pred E--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEE---------EcCcchHHHHHHH
Confidence 2 56555542 444443 668999999753211 2222221 022112111000 0112356666665
Q ss_pred HHHHHHccCcchHHHHHHHHHHHHHHHHHH
Q 011339 431 AINILMDEGGETDDRRKRAREFQIMAKRAT 460 (488)
Q Consensus 431 ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~ 460 (488)
.|..+ .|+ .++++.+.+++..++.+
T Consensus 133 ~Il~~-~d~----~l~~kl~~~r~~~~~~v 157 (174)
T 3lp6_A 133 RMLGA-ANP----QLRARIVAFQDRLADVV 157 (174)
T ss_dssp HHHHT-TCH----HHHHHHHHHHHHHHHHH
T ss_pred HHHhC-CCH----HHHHHHHHHHHHHHHHH
Confidence 55443 455 88888888888877653
No 229
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=32.76 E-value=53 Score=30.35 Aligned_cols=38 Identities=5% Similarity=-0.150 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCccC----HHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGH----MIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GH----v~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++||+++..+-.+- +.-...++++|.++||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57888888753332 345788999999999999999753
No 230
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=32.68 E-value=92 Score=26.07 Aligned_cols=38 Identities=5% Similarity=0.120 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+++||+++.++... ..-+....+.|.+.|++|++++..
T Consensus 8 ~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 8 TGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp TTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 66899999876554 445666778889999999999875
No 231
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=32.52 E-value=50 Score=27.85 Aligned_cols=38 Identities=18% Similarity=0.351 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCccCHHHHHH-HHHHHHH-CCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMID-TARLLAQ-HGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~-LA~~L~~-rGH~Vt~~~~~ 46 (488)
||||+++-....|+..-+.. +++.|.+ .|++|.++-..
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 57898888777887766554 4666666 79999887554
No 232
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=32.22 E-value=71 Score=24.59 Aligned_cols=65 Identities=12% Similarity=0.039 Sum_probs=44.9
Q ss_pred hccCCcccccccCCchh---------HHHHhhcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccc
Q 011339 352 LSHPSIGGFLTHCSWNS---------SLEGISAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVL 422 (488)
Q Consensus 352 l~~~~~~~~IthgG~gs---------~~eal~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~ 422 (488)
++.+++ +|--.|..| +..|...|+|+|++=.++.+. .-..+ ++.+..++ .
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l-~~~a~~iV-----------------~ 94 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPEL-EAVSSEVV-----------------G 94 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTH-HHHCSEEE-----------------C
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHH-HhhCceec-----------------c
Confidence 345566 888888876 557788999999988777652 22225 34443322 3
Q ss_pred cCHHHHHHHHHHHHc
Q 011339 423 VKKEDVVKAINILMD 437 (488)
Q Consensus 423 ~~~~~l~~ai~~~l~ 437 (488)
.+.+.|.++|+..++
T Consensus 95 Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 95 WNPHCIRDALEDALD 109 (111)
T ss_dssp SCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhccC
Confidence 899999999998764
No 233
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=32.22 E-value=1.4e+02 Score=27.18 Aligned_cols=34 Identities=21% Similarity=0.154 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|+++++..+.| ==..+|++|+++|++|.++.-.
T Consensus 31 gk~vlVTGas~g---IG~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 31 GRAAVVTGGASG---IGLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 356667665533 2367899999999999887653
No 234
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=32.21 E-value=28 Score=31.50 Aligned_cols=38 Identities=8% Similarity=-0.011 Sum_probs=26.4
Q ss_pred CCCCCEEEEEcCCCccCHHH--HHHHHHHHHHCCCeEEEEeCCc
Q 011339 6 SCQQPHFVLFPFLAQGHMIP--MIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 6 ~~~~~kvl~~~~~~~GHv~p--~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
||.|.|||++. ||-.+ ...|.+.|.+.|++|+++....
T Consensus 1 ~~~m~~vLiV~----g~~~~~~a~~l~~aL~~~g~~V~~i~~~~ 40 (259)
T 3rht_A 1 SNAMTRVLYCG----DTSLETAAGYLAGLMTSWQWEFDYIPSHV 40 (259)
T ss_dssp -----CEEEEE----SSCTTTTHHHHHHHHHHTTCCCEEECTTS
T ss_pred CCCCceEEEEC----CCCchhHHHHHHHHHHhCCceEEEecccc
Confidence 46788999993 77443 5678889999999999998763
No 235
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=32.02 E-value=45 Score=33.20 Aligned_cols=34 Identities=15% Similarity=0.025 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC-CC-eEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH-GA-AITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r-GH-~Vt~~~~~ 46 (488)
++|||.++..|..| +++|..|+++ || +|+++...
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECC
Confidence 67999999998888 5789999999 99 99998654
No 236
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=32.02 E-value=42 Score=33.38 Aligned_cols=40 Identities=18% Similarity=0.115 Sum_probs=28.3
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeC
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTT 45 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~ 45 (488)
|.+....++|||.++..|..| +.+|..|+++ ||+|+++..
T Consensus 1 m~~~~~~~~mkI~VIG~G~vG-----~~~A~~La~~g~g~~V~~~D~ 42 (481)
T 2o3j_A 1 MTDQVFGKVSKVVCVGAGYVG-----GPTCAMIAHKCPHITVTVVDM 42 (481)
T ss_dssp --CCSSCCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCCCCCCCCCEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 544432257899999887777 4678888888 799998854
No 237
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=31.80 E-value=21 Score=35.40 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=30.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHH
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTV 55 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (488)
.|||+++..+-.| ..||+.|.+.||+|+++-. +.+.++..
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~--d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVDK--DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEES--CHHHHHHH
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEEC--CHHHHHHH
Confidence 5899999887666 4689999999999999954 34445443
No 238
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=31.73 E-value=34 Score=32.29 Aligned_cols=35 Identities=9% Similarity=0.122 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHH--CCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQ--HGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~--rGH~Vt~~~~~ 46 (488)
++++|+++. +.|-+ -..|+++|.+ +||+|+.+.-.
T Consensus 9 ~~~~vlVTG--atG~I--G~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 9 ENQTILITG--GAGFV--GSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp TTCEEEEET--TTSHH--HHHHHHHHHHHCTTSEEEEEECC
T ss_pred CCCEEEEEC--CCCHH--HHHHHHHHHhhCCCCeEEEEECC
Confidence 667887773 33322 2478899999 99999998653
No 239
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=31.69 E-value=7.8 Score=34.39 Aligned_cols=114 Identities=15% Similarity=0.043 Sum_probs=60.5
Q ss_pred cCHHHHHHHHHHHHHC-CCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccc--cCC--CCCC----ccccCCC
Q 011339 21 GHMIPMIDTARLLAQH-GAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQE--AGV--PEGC----ENFDMLH 91 (488)
Q Consensus 21 GHv~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~l--~~~~----~~~~~~~ 91 (488)
|.+.-.+.+|+++.+. |.+|.+.-+ .+...+++. .++..+.++....| ..+ .... .-.+...
T Consensus 46 ~~le~av~~a~~~~~~~~~dVIISRG-gta~~Lr~~--------~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~ 116 (225)
T 2pju_A 46 LGFEKAVTYIRKKLANERCDAIIAAG-SNGAYLKSR--------LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQE 116 (225)
T ss_dssp CCHHHHHHHHHHHTTTSCCSEEEEEH-HHHHHHHTT--------CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESS
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEeCC-hHHHHHHhh--------CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCch
Confidence 5577788889887775 688665544 455555543 24667777644433 000 0000 0000000
Q ss_pred chhhHHHHHHHH-----------HHhhHHHHHHHHhcCCCCeEEEEcCCCcchHHHHHhcCCCcEEEe
Q 011339 92 STDLVSNFFKSL-----------RLLQLPLENLLKELTPKPSCIVSDTCYPWTVDTAARFNIPRISFH 148 (488)
Q Consensus 92 ~~~~~~~~~~~~-----------~~~~~~l~~~l~~~~~~pD~vv~D~~~~~~~~~a~~lgiP~v~~~ 148 (488)
.......+.... ..........++. ...|+||.|.. +..+|+++|+|.+.+.
T Consensus 117 ~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~--~G~~vVVG~~~---~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 117 TIPALVAFQKTFNLRLDQRSYITEEDARGQINELKA--NGTEAVVGAGL---ITDLAEEAGMTGIFIY 179 (225)
T ss_dssp CCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHH--TTCCEEEESHH---HHHHHHHTTSEEEESS
T ss_pred hhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHH--CCCCEEECCHH---HHHHHHHcCCcEEEEC
Confidence 011122222222 1112233333344 58999999844 6889999999998876
No 240
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=31.64 E-value=1.1e+02 Score=27.31 Aligned_cols=33 Identities=9% Similarity=-0.018 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
-|+++++.++.| -=..+|++|+++|++|.++..
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 367777776654 246789999999999998753
No 241
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=31.53 E-value=37 Score=31.58 Aligned_cols=31 Identities=19% Similarity=0.116 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|||+|+..+..| ..+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 589998877666 4578999999999999876
No 242
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=31.51 E-value=1.8e+02 Score=24.04 Aligned_cols=54 Identities=7% Similarity=-0.004 Sum_probs=38.1
Q ss_pred CCCEEEEEcCC-CccCHH--HHHHHHHHHHHCCCeEEEE-eCCcchhhhHHHHHhhhc
Q 011339 8 QQPHFVLFPFL-AQGHMI--PMIDTARLLAQHGAAITIV-TTPANAARFKTVVARAMQ 61 (488)
Q Consensus 8 ~~~kvl~~~~~-~~GHv~--p~l~LA~~L~~rGH~Vt~~-~~~~~~~~~~~~~~~~~~ 61 (488)
+++|+.+++.+ ..|.+. ....|++.|.+.|++|... ..+++.+.+++.+.....
T Consensus 9 ~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~ 66 (172)
T 1mkz_A 9 IPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIA 66 (172)
T ss_dssp CCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHh
Confidence 67899888876 445442 2345899999999998865 346777777777766543
No 243
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=31.42 E-value=33 Score=31.72 Aligned_cols=33 Identities=12% Similarity=0.271 Sum_probs=22.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
||||+++. +.|-+ -..|+++|.++||+|+.+.-
T Consensus 1 M~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 33 (330)
T 2c20_A 1 MNSILICG--GAGYI--GSHAVKKLVDEGLSVVVVDN 33 (330)
T ss_dssp -CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEC--CCcHH--HHHHHHHHHhCCCEEEEEeC
Confidence 46777664 33333 25789999999999998864
No 244
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=31.37 E-value=67 Score=28.27 Aligned_cols=40 Identities=20% Similarity=0.164 Sum_probs=28.4
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCcc-------hHHHHHhcCCCcEEE
Q 011339 108 LPLENLLKELTPKPSCIVSDTCYPW-------TVDTAARFNIPRISF 147 (488)
Q Consensus 108 ~~l~~~l~~~~~~pD~vv~D~~~~~-------~~~~a~~lgiP~v~~ 147 (488)
..+.+.++....+||+|++|..... |..+.-.+++|+|.+
T Consensus 91 P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 91 PLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 4455555665468999999997553 455666778999986
No 245
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=31.22 E-value=42 Score=26.96 Aligned_cols=37 Identities=8% Similarity=0.090 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcc
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPAN 48 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~ 48 (488)
.-++++++.+. =+.|++++++.|.++|.+|+++ ...+
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 35788877655 4899999999999999999998 5433
No 246
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=31.15 E-value=39 Score=30.82 Aligned_cols=34 Identities=21% Similarity=0.088 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++.||+++..+..| ..+|+.|+++||+|+++...
T Consensus 3 ~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 3 GITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 46789999776666 46899999999999998543
No 247
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=30.92 E-value=49 Score=25.27 Aligned_cols=39 Identities=13% Similarity=0.052 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCCccCHHHHH-HHHHHHHHCCCe-EEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMI-DTARLLAQHGAA-ITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l-~LA~~L~~rGH~-Vt~~~~~ 46 (488)
+|+||+++|..+.|+-.-+. .|-+.+.++|.+ +.+-..+
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~ 57 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCS 57 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEee
Confidence 67899999999999988877 677788889988 6655444
No 248
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=30.91 E-value=60 Score=28.82 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.++|.++++..+.| + =..+|++|+++|++|.++...
T Consensus 5 ~~~k~vlVTGas~g-I--G~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 5 RFVRHALITAGTKG-L--GKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp -CCCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred cccCEEEEeCCCch-h--HHHHHHHHHHCCCEEEEEcCC
Confidence 46778888765532 2 358899999999999987554
No 249
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=30.91 E-value=29 Score=32.84 Aligned_cols=35 Identities=3% Similarity=0.068 Sum_probs=25.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH-GAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r-GH~Vt~~~~~ 46 (488)
+||||+++. +.|.+- ..|+++|.++ ||+|+.+.-.
T Consensus 23 ~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 23 KAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred CCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 567887764 344443 5788999998 9999998754
No 250
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=30.88 E-value=28 Score=33.25 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++|||.|+..+..| ..+|+.|+++||+|+++...
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 45899999876655 47899999999999988543
No 251
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=30.76 E-value=1.2e+02 Score=29.51 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=23.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.||+++.. | ...+.+++++.+.|++|+++.+.
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~ 34 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKELGIKTVAVHSS 34 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEEG
T ss_pred ceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEecc
Confidence 36777653 3 34567999999999999888653
No 252
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=30.68 E-value=2.6e+02 Score=24.15 Aligned_cols=34 Identities=24% Similarity=0.167 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|+++++.++.| ==..+|++|+++|++|.++...
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCC
Confidence 367777776654 3467899999999999886543
No 253
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=30.61 E-value=22 Score=35.30 Aligned_cols=30 Identities=13% Similarity=0.082 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEE
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIV 43 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~ 43 (488)
|.||+++-.+--| |.-|..|+++||+|+++
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G~~V~Vl 30 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAGIPVLLL 30 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCCCcEEEE
Confidence 5678888766444 77788999999999998
No 254
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=30.57 E-value=2.8e+02 Score=25.13 Aligned_cols=40 Identities=10% Similarity=0.044 Sum_probs=32.1
Q ss_pred hhHHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhcCCCcEEE
Q 011339 106 LQLPLENLLKELTPKPSCIVSDTCYP--WTVDTAARFNIPRISF 147 (488)
Q Consensus 106 ~~~~l~~~l~~~~~~pD~vv~D~~~~--~~~~~a~~lgiP~v~~ 147 (488)
....+.+.+++ .+..+|+++..+. .+..+|+..|++++.+
T Consensus 216 ~l~~l~~~ik~--~~v~~if~e~~~~~~~~~~la~~~g~~v~~l 257 (286)
T 3gi1_A 216 QLKEIQDFVKE--YNVKTIFAEDNVNPKIAHAIAKSTGAKVKTL 257 (286)
T ss_dssp HHHHHHHHHHH--TTCCEEEECTTSCTHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHhCCeEEEe
Confidence 35667778888 7999999998655 5667899999998875
No 255
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=30.21 E-value=33 Score=32.00 Aligned_cols=33 Identities=12% Similarity=0.051 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCC-CeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHG-AAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rG-H~Vt~~~~~ 46 (488)
+|||.|+..+..| ..+|+.|+++| |+|+++...
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 4789999887776 67899999999 999987543
No 256
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=30.21 E-value=68 Score=24.19 Aligned_cols=42 Identities=21% Similarity=0.177 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhc-------CCCcEEEecch
Q 011339 108 LPLENLLKELTPKPSCIVSDTCYP--WTVDTAARF-------NIPRISFHGFS 151 (488)
Q Consensus 108 ~~l~~~l~~~~~~pD~vv~D~~~~--~~~~~a~~l-------giP~v~~~~~~ 151 (488)
.+..+.++. .+||+||.|...+ .+..+++.+ ++|++.++...
T Consensus 36 ~~al~~l~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 36 QIALEKLSE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHHTT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHHh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
No 257
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=30.15 E-value=51 Score=30.09 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=25.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
++|||+|+..+..|. .+|+.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 568999998877775 468889999999987644
No 258
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=30.10 E-value=16 Score=33.77 Aligned_cols=33 Identities=18% Similarity=0.034 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|||+++..|+.|- .+|..|++.||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 37899998888885 5788899999999999765
No 259
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=29.97 E-value=2.2e+02 Score=25.45 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
.|+++++.++.| ==..+|++|+++|++|.++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 467777765543 235789999999999988864
No 260
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=29.84 E-value=84 Score=26.48 Aligned_cols=86 Identities=14% Similarity=0.149 Sum_probs=55.8
Q ss_pred ccCHHHHHHHHHHHHHC--CCeEEEEeCCcchhhhHH-HHHhhhcCCCCeEEEEeeCCccccCCCCCCccccCCCchhhH
Q 011339 20 QGHMIPMIDTARLLAQH--GAAITIVTTPANAARFKT-VVARAMQSGLPLQLIEIQFPYQEAGVPEGCENFDMLHSTDLV 96 (488)
Q Consensus 20 ~GHv~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~ 96 (488)
...=.-++.+|+.|.+. ||++ +++......+++ . |+....+. ..+++
T Consensus 36 D~dK~~lv~~ak~~~~lL~Gf~L--~AT~gTa~~L~e~~---------Gl~v~~v~------k~~eG------------- 85 (178)
T 1vmd_A 36 DRRKRDLLEWVSFNLGTLSKHEL--YATGTTGALLQEKL---------GLKVHRLK------SGPLG------------- 85 (178)
T ss_dssp GGGHHHHHHHHHHSHHHHTTSEE--EECHHHHHHHHHHH---------CCCCEECS------CGGGT-------------
T ss_pred hhhHHHHHHHHHHHHHHhcCCEE--EEchHHHHHHHHHh---------CceeEEEe------ecCCC-------------
Confidence 44456699999999999 9964 455555555554 3 55543331 11111
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCC--Cc--------chHHHHHhcCCCcEE
Q 011339 97 SNFFKSLRLLQLPLENLLKELTPKPSCIVSDTC--YP--------WTVDTAARFNIPRIS 146 (488)
Q Consensus 97 ~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~--~~--------~~~~~a~~lgiP~v~ 146 (488)
-...+.+.+++ .+.|+||...- .. .-..+|-..+||+++
T Consensus 86 ---------G~pqI~d~I~~--geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 86 ---------GDQQIGAMIAE--GKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp ---------HHHHHHHHHHT--TSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred ---------CCchHHHHHHC--CCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 13457778888 89999997543 21 246688999999986
No 261
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=29.82 E-value=56 Score=29.08 Aligned_cols=37 Identities=14% Similarity=0.111 Sum_probs=31.3
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHHCCCeEEEEe
Q 011339 8 QQPHFVLFPF--LAQGHMIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 8 ~~~kvl~~~~--~~~GHv~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
+|+|.+|++. ..-|=..-.+.|++.|+++|++|.++=
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 6788877775 477788889999999999999999984
No 262
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=29.78 E-value=27 Score=32.10 Aligned_cols=32 Identities=13% Similarity=0.113 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
+|||.|+..+..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 46899998887774 689999999999998854
No 263
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=29.69 E-value=52 Score=30.21 Aligned_cols=36 Identities=11% Similarity=0.128 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
+|++|+++. +.|.+- ..|+++|.++||+|+.++-..
T Consensus 3 ~~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 3 HMEKIIIYG--GTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp -CCCEEEET--TTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred cccEEEEEc--CCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 466777664 444442 368899999999999987653
No 264
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=29.68 E-value=41 Score=27.61 Aligned_cols=36 Identities=8% Similarity=0.116 Sum_probs=29.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcc
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPAN 48 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~ 48 (488)
.++++++.+. =+.|++++++.|.++|.+|+++ ...+
T Consensus 24 ~~~llIaGG~--GItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEEccC--cHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4788777655 3999999999999999999998 5433
No 265
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=29.65 E-value=50 Score=29.87 Aligned_cols=49 Identities=8% Similarity=-0.025 Sum_probs=39.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHH--------HHHC-CCeEEEEeCCcchhhhHHHH
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARL--------LAQH-GAAITIVTTPANAARFKTVV 56 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~--------L~~r-GH~Vt~~~~~~~~~~~~~~~ 56 (488)
++.||++.+.++..|-....-++.- |..+ |++|.++......+.+.+..
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa 176 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKA 176 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHH
Confidence 4678999999999999999999987 9999 99999987764444444443
No 266
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=29.51 E-value=49 Score=27.42 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=22.0
Q ss_pred CCCCCEEEEEcCC----CccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 6 SCQQPHFVLFPFL----AQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 6 ~~~~~kvl~~~~~----~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|+.|||+++++.. ..||+ .++++.++.+.+|.++..
T Consensus 1 ~~~mm~i~i~~GsFDPiH~GHl----~li~~A~~~~d~viv~v~ 40 (162)
T 4f3r_A 1 SNAMKPIAIYPGTFDPLTNGHV----DIIERALPLFNKIIVACA 40 (162)
T ss_dssp ----CCEEEEEECCTTCCHHHH----HHHHHHGGGCSEEEEEEC
T ss_pred CCCceEEEEEEEEcCCCCHHHH----HHHHHHHHHCCcEEEEEe
Confidence 4578999988854 55664 566666666777777655
No 267
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=29.45 E-value=58 Score=29.88 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 11 HFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 11 kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
+|+++. +.|.+ -..|+++|.++||+|+.++-..
T Consensus 13 ~ilVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIFG--GTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEEC--CCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 566553 34444 2468899999999999887653
No 268
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=29.40 E-value=77 Score=28.04 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=28.2
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCc-------chHHHHHhcCCCcEEE
Q 011339 108 LPLENLLKELTPKPSCIVSDTCYP-------WTVDTAARFNIPRISF 147 (488)
Q Consensus 108 ~~l~~~l~~~~~~pD~vv~D~~~~-------~~~~~a~~lgiP~v~~ 147 (488)
..+.+.++....+||++++|..-. -|..+.-.+++|+|-+
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 444455555446899999999744 3566777788999886
No 269
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=29.29 E-value=3.4e+02 Score=24.92 Aligned_cols=110 Identities=13% Similarity=0.128 Sum_probs=0.0
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCCc
Q 011339 6 SCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGCE 85 (488)
Q Consensus 6 ~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~ 85 (488)
+.+++||+++..+. || .+.+|..+-.+-...+.+..--.+.+.++...... ++.++.++
T Consensus 102 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~-----gIp~~~~~------------- 160 (302)
T 3o1l_A 102 SAQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH-----DIPYYHVP------------- 160 (302)
T ss_dssp TTSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT-----TCCEEECC-------------
T ss_pred cCCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc-----CCCEEEcC-------------
Q ss_pred cccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCc-chHHHHHhcCCCcEEEecc
Q 011339 86 NFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYP-WTVDTAARFNIPRISFHGF 150 (488)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~-~~~~~a~~lgiP~v~~~~~ 150 (488)
...... ....+++.+++++ .+||+||.-.|.- -...+...+.-.++-+.++
T Consensus 161 -~~~~~r-----------~~~~~~~~~~l~~--~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 161 -VDPKDK-----------EPAFAEVSRLVGH--HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp -CCSSCC-----------HHHHHHHHHHHHH--TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred -CCcCCH-----------HHHHHHHHHHHHH--hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
No 270
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=29.04 E-value=86 Score=27.33 Aligned_cols=39 Identities=13% Similarity=0.080 Sum_probs=28.1
Q ss_pred CCCEEEEEcCCCccCH----HHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHM----IPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv----~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|.+|.+++....+-- .-...|++.|+++|+.|+.-..+
T Consensus 12 ~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 12 KFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp SCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 5557999976655532 34667889999999998876553
No 271
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=29.00 E-value=31 Score=34.44 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
++|||.|+..+..| ..+|..|+++||+|++...
T Consensus 3 ~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr 35 (484)
T 4gwg_A 3 AQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNR 35 (484)
T ss_dssp CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 68899999887766 4689999999999998854
No 272
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=28.90 E-value=1.2e+02 Score=21.08 Aligned_cols=54 Identities=9% Similarity=0.154 Sum_probs=30.2
Q ss_pred ccCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHH--hcCCchHHHHHHHHHHHH
Q 011339 422 LVKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRAT--EETRSSSLMIKLLIQDIM 478 (488)
Q Consensus 422 ~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~--~~gg~~~~~~~~~i~~~~ 478 (488)
..|.++|.++|+++|.+.+ -+.+.. +++++.+.+.. -+=.+....|+..|..+-
T Consensus 11 ~Psd~ei~~~I~~IL~~aD-L~tvT~--K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L 66 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASAN-LEEVTM--KQICKKVYENYPTYDLTERKDFIKTTVKELI 66 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSC-GGGCCH--HHHHHHHHHHCSSSCCSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCC-HHHHhH--HHHHHHHHHHccCCCChHHHHHHHHHHHHHH
Confidence 4899999999999998642 122211 33444443332 111234456666666643
No 273
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=28.88 E-value=52 Score=31.38 Aligned_cols=37 Identities=11% Similarity=-0.113 Sum_probs=27.8
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 5 GSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 5 ~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|+.+++||+++..+ .-...++++++++||+|..+...
T Consensus 7 m~~~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 7 LRPAATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp TSTTCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECC
Confidence 34467899999553 23467899999999999888664
No 274
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=28.84 E-value=37 Score=30.58 Aligned_cols=33 Identities=21% Similarity=0.148 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
||||+++. + |.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 35777764 5 6554 46789999999999998764
No 275
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=28.80 E-value=24 Score=31.71 Aligned_cols=33 Identities=15% Similarity=0.202 Sum_probs=24.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCe-EEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAA-ITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~-Vt~~~~ 45 (488)
++|||+++..|..|. .+|+.|++.||+ |+++..
T Consensus 9 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~v~~~~~ 42 (266)
T 3d1l_A 9 EDTPIVLIGAGNLAT-----NLAKALYRKGFRIVQVYSR 42 (266)
T ss_dssp GGCCEEEECCSHHHH-----HHHHHHHHHTCCEEEEECS
T ss_pred CCCeEEEEcCCHHHH-----HHHHHHHHCCCeEEEEEeC
Confidence 578999997765553 568888889999 666543
No 276
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=28.73 E-value=32 Score=29.64 Aligned_cols=33 Identities=9% Similarity=0.031 Sum_probs=23.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|||+++. +.|-+= ..|+++|.++||+|+.++-.
T Consensus 1 M~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVG--STGRVG--KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 5777664 333332 57899999999999998764
No 277
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=28.68 E-value=40 Score=30.72 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=25.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|||.|+..+..| ..+|+.|+++||+|+++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 689999776665 56799999999999987543
No 278
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=28.59 E-value=54 Score=29.16 Aligned_cols=39 Identities=21% Similarity=0.135 Sum_probs=30.2
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 9 QPHFVLFP--FLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 9 ~~kvl~~~--~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
|+|++.+. -++-|-..-...||..|+++|++|.++-...
T Consensus 1 M~~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 1 MVRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp -CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34554443 4678888899999999999999999996543
No 279
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=28.34 E-value=40 Score=28.89 Aligned_cols=32 Identities=22% Similarity=0.107 Sum_probs=24.0
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFP-FLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~-~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|||+++. .+..| ..+++.|.++||+|+++...
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 5788885 44444 46789999999999988653
No 280
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=27.99 E-value=2.3e+02 Score=23.66 Aligned_cols=141 Identities=11% Similarity=0.020 Sum_probs=76.0
Q ss_pred eEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHhcCCCeEE---ecccchhhhhc
Q 011339 277 SVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERVKGRGILI---LGWAPQVLILS 353 (488)
Q Consensus 277 ~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~---~~~~pq~~ll~ 353 (488)
.+++.-.|+.... ....+++.+++.+..+-...+... .++.-|+.+.. ... .++. ..|+++.++-.
T Consensus 7 ~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A------~~fi~~~~l~~-l~~-~v~~~~~~~~~~hi~l~~ 75 (175)
T 3qjg_A 7 NVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNG------RKFINGEILKQ-FCD-NYYDEFEDPFLNHVDIAN 75 (175)
T ss_dssp EEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGG------GGGSCHHHHHH-HCS-CEECTTTCTTCCHHHHHH
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCH------HHHhhHHHHHH-hcC-CEEecCCCCccccccccc
Confidence 4666666666653 234566777777776655554432 11212333322 212 3332 13466777766
Q ss_pred cCCcccccccCCchhHH-------------HHhhcCCCEeecCcccc-------cchhHHHHHHHhcceEEecccC---C
Q 011339 354 HPSIGGFLTHCSWNSSL-------------EGISAGVPLITWPLYGD-------QFWNEKLIVQVLNIGVRIGVEV---P 410 (488)
Q Consensus 354 ~~~~~~~IthgG~gs~~-------------eal~~GvP~v~~P~~~D-------Q~~na~rv~e~~G~G~~l~~~~---~ 410 (488)
.+++ ++|-=|-.||+. -++..++|+|++|-..+ ...|-.++ ++.|+=+.-.... .
T Consensus 76 ~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L-~~~G~~iv~P~~g~~~~ 153 (175)
T 3qjg_A 76 KHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLL-KDYGVSIYPANISESYE 153 (175)
T ss_dssp TCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHH-HHTTCEECCCCEEEEEE
T ss_pred hhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHH-HHCCCEEECCCCCCccc
Confidence 6665 567767777554 34777999999994321 23477888 4877643322221 1
Q ss_pred CCCCcccccc-cccCHHHHHHH
Q 011339 411 LDFGEEEEIG-VLVKKEDVVKA 431 (488)
Q Consensus 411 ~~~~~~~~~~-~~~~~~~l~~a 431 (488)
+--|. .+++ +-.++++|.+.
T Consensus 154 lacg~-~g~G~~~~~~~~i~~~ 174 (175)
T 3qjg_A 154 LASKT-FKKNVVAPEPYKVLEF 174 (175)
T ss_dssp GGGTE-EEEEECCCCHHHHHHH
T ss_pred ccCCC-cCCCCCCCCHHHHHhh
Confidence 11111 2444 55777777654
No 281
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=27.93 E-value=38 Score=29.43 Aligned_cols=34 Identities=12% Similarity=0.071 Sum_probs=24.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++|||+++..+..| ..+|+.|++.||+|+++...
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 45789998655444 35788899999999887543
No 282
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=27.84 E-value=95 Score=25.84 Aligned_cols=39 Identities=10% Similarity=0.071 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|.-|.++..++.|-..=+..|++.|.++|+.|.++...
T Consensus 3 ~~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~ 41 (169)
T 1xjc_A 3 AMNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHH 41 (169)
T ss_dssp -CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeC
Confidence 444556777778898888889999999999999988765
No 283
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=27.83 E-value=46 Score=29.55 Aligned_cols=34 Identities=26% Similarity=0.184 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
..+||.|+..+..| ..+|+.|+++||+|++....
T Consensus 18 ~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 56899999777665 46799999999999988654
No 284
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=27.67 E-value=2e+02 Score=24.26 Aligned_cols=62 Identities=16% Similarity=0.186 Sum_probs=38.3
Q ss_pred CCEE-EEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcc---hhhhHHHHHhhhcCCCCeEEEEee
Q 011339 9 QPHF-VLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPAN---AARFKTVVARAMQSGLPLQLIEIQ 72 (488)
Q Consensus 9 ~~kv-l~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~ 72 (488)
+.|| +|+..+...+-.....+++.|++.|+.|.++..... .+ ++... +....+.+-.++.+|
T Consensus 106 ~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la-~~~n~~~~s~~~~~~ 171 (192)
T 2x5n_A 106 RQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFI-DAANSSDSCHLVSIP 171 (192)
T ss_dssp EEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHH-HHHCSTTCCEEEEEC
T ss_pred CceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHH-HhccCCCceEEEEec
Confidence 3455 555555555677788999999999999998755422 23 43333 222233456677665
No 285
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=27.67 E-value=2.6e+02 Score=23.07 Aligned_cols=138 Identities=13% Similarity=0.142 Sum_probs=74.1
Q ss_pred eEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHHh---cCCCeEEecccchhhhhc
Q 011339 277 SVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEERV---KGRGILILGWAPQVLILS 353 (488)
Q Consensus 277 ~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~nv~~~~~~pq~~ll~ 353 (488)
+.|-|-+||... ....+++...++.++..+-..+.+-.| .|+.+.+.. ....
T Consensus 4 ~~V~Iimgs~SD--~~v~~~a~~~l~~~gi~~ev~V~SaHR---------~p~~~~~~~~~a~~~g-------------- 58 (163)
T 3ors_A 4 MKVAVIMGSSSD--WKIMQESCNMLDYFEIPYEKQVVSAHR---------TPKMMVQFASEARERG-------------- 58 (163)
T ss_dssp CCEEEEESCGGG--HHHHHHHHHHHHHTTCCEEEEECCTTT---------SHHHHHHHHHHTTTTT--------------
T ss_pred CeEEEEECcHHH--HHHHHHHHHHHHHcCCCEEEEEECCcC---------CHHHHHHHHHHHHhCC--------------
Confidence 357777887775 445566677777788776655555543 344332211 1111
Q ss_pred cCCcccccccCCch----hHHHHhhcCCCEeecCcccccc-hhHHHHH-HHh--cc--eEE-ecccCCCCCCcccccccc
Q 011339 354 HPSIGGFLTHCSWN----SSLEGISAGVPLITWPLYGDQF-WNEKLIV-QVL--NI--GVR-IGVEVPLDFGEEEEIGVL 422 (488)
Q Consensus 354 ~~~~~~~IthgG~g----s~~eal~~GvP~v~~P~~~DQ~-~na~rv~-e~~--G~--G~~-l~~~~~~~~~~~~~~~~~ 422 (488)
.++ +|.=+|.. ++.-++ .-+|+|.+|...... .....+. -+. |+ +.. +++. +.
T Consensus 59 -~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a------------~~ 122 (163)
T 3ors_A 59 -INI--IIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAA------------GA 122 (163)
T ss_dssp -CCE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHH------------HH
T ss_pred -CcE--EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCc------------cc
Confidence 122 66655543 444443 678999999754311 2222221 022 22 222 2211 13
Q ss_pred cCHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHH
Q 011339 423 VKKEDVVKAINILMDEGGETDDRRKRAREFQIMAKRAT 460 (488)
Q Consensus 423 ~~~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~~ 460 (488)
.++..++..|.. +.|+ .++++.+.+++.+++.+
T Consensus 123 ~nAa~lAa~Il~-~~d~----~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 123 KNAGILAARMLS-IQNP----SLVEKLNQYESSLIQKV 155 (163)
T ss_dssp HHHHHHHHHHHH-TTCT----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCH----HHHHHHHHHHHHHHHHH
Confidence 555555555543 3566 89999999998877654
No 286
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=27.59 E-value=78 Score=25.88 Aligned_cols=37 Identities=16% Similarity=0.121 Sum_probs=28.5
Q ss_pred CEEEEEcCCCccCHHHHHH-HHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMID-TARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~-LA~~L~~rGH~Vt~~~~~ 46 (488)
|||+++-...+|+..-+.. |++.|.+.|++|.++...
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 6788887778899877654 688888899999887554
No 287
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=27.55 E-value=34 Score=31.74 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCC--eEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGA--AITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH--~Vt~~~~~ 46 (488)
++|||+++..|+.|- .+|..|+++|| +|+++...
T Consensus 6 ~~mkI~IiGaG~vG~-----~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGAGAVGS-----TLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHHTTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHH-----HHHHHHHhCCCCCEEEEEeCC
Confidence 568999997655443 37788999999 99998765
No 288
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=27.53 E-value=3.6e+02 Score=24.63 Aligned_cols=40 Identities=15% Similarity=0.239 Sum_probs=26.4
Q ss_pred CEEEEEcCCCcc---CH--HHHHHHHHHHHHCCCeEEEEeCCcch
Q 011339 10 PHFVLFPFLAQG---HM--IPMIDTARLLAQHGAAITIVTTPANA 49 (488)
Q Consensus 10 ~kvl~~~~~~~G---Hv--~p~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (488)
..|++.+....+ .+ .-+..+++.|.++|++|.++..+...
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~ 225 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDH 225 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGH
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhH
Confidence 345666544232 22 26889999999999999887665443
No 289
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=27.50 E-value=71 Score=29.70 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=32.2
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 10 PHFVLFPF-LAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 10 ~kvl~~~~-~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
.+|+|++. |+-|-..-...||..|+++|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 45555553 799999999999999999999999998875
No 290
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=27.47 E-value=52 Score=31.40 Aligned_cols=38 Identities=11% Similarity=-0.019 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCCcc-C---HHHHHHHHHHH-HHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQG-H---MIPMIDTARLL-AQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~G-H---v~p~l~LA~~L-~~rGH~Vt~~~~ 45 (488)
++|||+++..+..+ | +.-...++++| .++||+|+.+-.
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 46899988776444 3 33468889999 999999998853
No 291
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=27.42 E-value=86 Score=24.18 Aligned_cols=37 Identities=8% Similarity=0.106 Sum_probs=27.1
Q ss_pred EE-EEEcCCCccCH--HHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 11 HF-VLFPFLAQGHM--IPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 11 kv-l~~~~~~~GHv--~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
|+ +++..+-+|+. .-.+.+|.++...||+|.++-...
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~D 42 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehH
Confidence 35 44455667776 557888999999999999886653
No 292
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=27.40 E-value=1.7e+02 Score=26.61 Aligned_cols=102 Identities=10% Similarity=0.095 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeC-CcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTT-PANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGC 84 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~ 84 (488)
+++||+++..+. || .+.+|..+-.+- ..+|..+.+ ......+ ... .++.++.+|. ..
T Consensus 89 ~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~---A~~-----~gIp~~~~~~---------~~ 148 (286)
T 3n0v_A 89 HRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPL---AHW-----HKIPYYHFAL---------DP 148 (286)
T ss_dssp CCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHH---HHH-----TTCCEEECCC---------BT
T ss_pred CCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHH---HHH-----cCCCEEEeCC---------Cc
Confidence 678999888766 54 445555554332 367776544 3322222 122 2777776541 00
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
.. . ....+++.+++++ .+||+||.-.|. .-...+...+.-.++-+
T Consensus 149 ------~~-r---------~~~~~~~~~~l~~--~~~Dlivla~y~~il~~~~l~~~~~~~iNi 194 (286)
T 3n0v_A 149 ------KD-K---------PGQERKVLQVIEE--TGAELVILARYMQVLSPELCRRLDGWAINI 194 (286)
T ss_dssp ------TB-H---------HHHHHHHHHHHHH--HTCSEEEESSCCSCCCHHHHHHTTTSEEEE
T ss_pred ------CC-H---------HHHHHHHHHHHHh--cCCCEEEecccccccCHHHHhhhcCCeEEe
Confidence 00 0 0123456677777 799999988764 34555666665555554
No 293
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=27.40 E-value=44 Score=28.61 Aligned_cols=36 Identities=11% Similarity=0.022 Sum_probs=21.4
Q ss_pred CCEEEEEcCCCccC-HHHHHHHHHHHHHCCCeEEEEe
Q 011339 9 QPHFVLFPFLAQGH-MIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 9 ~~kvl~~~~~~~GH-v~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
||||+++...-..+ -.-.-.+++.+.+.|++|+++-
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 57887766543332 1234455667777788888774
No 294
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=27.36 E-value=92 Score=23.85 Aligned_cols=38 Identities=8% Similarity=0.042 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIP-MIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p-~l~LA~~L~~rGH~Vt~~~~ 45 (488)
+++||+++|..+.|+-.- .-.|-+.+.++|.++.+-..
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 678999999999999885 66777888889998765443
No 295
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=27.26 E-value=54 Score=27.54 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|+|+++. +.|-+ -..|+++|.++||+|+.++-.
T Consensus 4 ~~ilVtG--atG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFG--ATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 6777663 44433 357889999999999988754
No 296
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=27.23 E-value=79 Score=28.69 Aligned_cols=38 Identities=8% Similarity=-0.076 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCc-cCHH---HHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQ-GHMI---PMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~-GHv~---p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|||+++..+.. -|-. -...++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 368988876532 2222 3467999999999999988765
No 297
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=27.19 E-value=43 Score=29.95 Aligned_cols=30 Identities=13% Similarity=0.103 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
|||.|+..+..|. .+|+.|++.||+|++..
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeC
Confidence 5899987776664 57999999999999853
No 298
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=27.17 E-value=2.5e+02 Score=23.34 Aligned_cols=53 Identities=13% Similarity=0.218 Sum_probs=37.9
Q ss_pred CCCEEEEEcCCC-------c-cCHH--HHHHHHHHHHHCCCeEEEEe-CCcchhhhHHHHHhhh
Q 011339 8 QQPHFVLFPFLA-------Q-GHMI--PMIDTARLLAQHGAAITIVT-TPANAARFKTVVARAM 60 (488)
Q Consensus 8 ~~~kvl~~~~~~-------~-GHv~--p~l~LA~~L~~rGH~Vt~~~-~~~~~~~~~~~~~~~~ 60 (488)
+++||.+++.+- . |.+. ....|+..|.+.|++|.... .+++.+.+++.+....
T Consensus 14 ~~~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~ 77 (178)
T 2pjk_A 14 KSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDAL 77 (178)
T ss_dssp CCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHH
Confidence 689999999874 3 4432 24457899999999998763 4667777777776553
No 299
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=27.03 E-value=1.6e+02 Score=25.81 Aligned_cols=34 Identities=12% Similarity=-0.095 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|+++++.++.| ==..+|++|+++|++|.++.-.
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456666655433 2468899999999999887653
No 300
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=26.97 E-value=81 Score=24.86 Aligned_cols=34 Identities=6% Similarity=0.018 Sum_probs=23.7
Q ss_pred CCCEEEEEcCCCccCHH--------HHHHHHHHHHHCCCeEE
Q 011339 8 QQPHFVLFPFLAQGHMI--------PMIDTARLLAQHGAAIT 41 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~--------p~l~LA~~L~~rGH~Vt 41 (488)
-+||.++++.|-.|... -+-..|..|.++||-+.
T Consensus 6 ~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 6 GHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp -CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 46788899999777732 24456777889999644
No 301
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=26.95 E-value=54 Score=28.82 Aligned_cols=28 Identities=18% Similarity=0.237 Sum_probs=22.4
Q ss_pred CCEEEEEcCCCcc--CHHHHHHHHHHHHHC
Q 011339 9 QPHFVLFPFLAQG--HMIPMIDTARLLAQH 36 (488)
Q Consensus 9 ~~kvl~~~~~~~G--Hv~p~l~LA~~L~~r 36 (488)
|+||+++.|.-+| .+||...++++|.+.
T Consensus 2 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 31 (223)
T 3ro0_A 2 EKKVLLTGFDPFGGETVNPSWEAVKRLNGA 31 (223)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHTTTC
T ss_pred CCEEEEEeCCCCCCCCCChHHHHHHHhccc
Confidence 5789999885333 479999999999874
No 302
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=26.69 E-value=1.8e+02 Score=27.57 Aligned_cols=40 Identities=5% Similarity=0.039 Sum_probs=34.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchh
Q 011339 11 HFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAA 50 (488)
Q Consensus 11 kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (488)
-+++...|+.|-..-.+.++..++.+|..|.|+..+...+
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALD 115 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChh
Confidence 3577778899999999999999999999999999875433
No 303
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=26.56 E-value=36 Score=30.41 Aligned_cols=33 Identities=9% Similarity=-0.008 Sum_probs=25.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
.||||+|+..+..|. .+++.|.+.||+|+++..
T Consensus 2 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 2 NAMKIGIIGVGKMAS-----AIIKGLKQTPHELIISGS 34 (259)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHTTSSCEEEEECS
T ss_pred CccEEEEECCCHHHH-----HHHHHHHhCCCeEEEECC
Confidence 578999998766653 578889999999987754
No 304
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=26.54 E-value=51 Score=28.43 Aligned_cols=38 Identities=5% Similarity=-0.060 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCccC---HHHHH-HHHHHHHHC--CCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGH---MIPMI-DTARLLAQH--GAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GH---v~p~l-~LA~~L~~r--GH~Vt~~~~~ 46 (488)
||||+++.....++ ..-+. .+++.|.++ ||+|+++-..
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~ 44 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVG 44 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 67898877665543 33322 345666666 8999887543
No 305
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=26.45 E-value=68 Score=32.17 Aligned_cols=39 Identities=15% Similarity=0.182 Sum_probs=32.7
Q ss_pred CCEEEEEcCC---CccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 9 QPHFVLFPFL---AQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 9 ~~kvl~~~~~---~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
++|.+|++.+ +.|-=.-..+|++.|+.||++||.+-..+
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dp 43 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDP 43 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCc
Confidence 4689999875 77777889999999999999999985543
No 306
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=26.45 E-value=56 Score=29.04 Aligned_cols=41 Identities=17% Similarity=0.190 Sum_probs=31.3
Q ss_pred CCCEEEEEc--CCCccCHHHHHHHHHHHHHCCCeEEEEeCCcc
Q 011339 8 QQPHFVLFP--FLAQGHMIPMIDTARLLAQHGAAITIVTTPAN 48 (488)
Q Consensus 8 ~~~kvl~~~--~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~ 48 (488)
+++|++.+. -++-|-..-...||..|+++|++|.++-....
T Consensus 4 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 4 AKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp -CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 345665554 36778888899999999999999999966543
No 307
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=26.41 E-value=54 Score=26.23 Aligned_cols=39 Identities=8% Similarity=0.143 Sum_probs=27.4
Q ss_pred CCEEEEE-cCCCccCHHH--HHHHHHHHHHCCCeEEEEeCCc
Q 011339 9 QPHFVLF-PFLAQGHMIP--MIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 9 ~~kvl~~-~~~~~GHv~p--~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
|.|++|+ ..+-+|+... .+.+|..+...||+|.++-...
T Consensus 5 Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 5 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred hhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 3356444 4556776555 5777999999999999886653
No 308
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=26.37 E-value=81 Score=25.10 Aligned_cols=36 Identities=14% Similarity=0.068 Sum_probs=28.0
Q ss_pred CCEEEEEcCCCccCHHHHH-HHHHHHHHCCCeEEEEe
Q 011339 9 QPHFVLFPFLAQGHMIPMI-DTARLLAQHGAAITIVT 44 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l-~LA~~L~~rGH~Vt~~~ 44 (488)
|||++++=...+|+..-+. .|++.|.+.|++|..+.
T Consensus 1 M~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 1 MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CCSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 4678888777888887754 56888888999998764
No 309
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=26.32 E-value=54 Score=29.79 Aligned_cols=34 Identities=6% Similarity=0.084 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|++|+++. +.|.+- ..|+++|.++||+|+.++-.
T Consensus 2 ~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 2 ENKILILG--PTGAIG--RHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHHTCCEEEEECC
T ss_pred CcEEEEEC--CCchHH--HHHHHHHHhCCCcEEEEECC
Confidence 56677664 444442 46789999999999988764
No 310
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=26.24 E-value=37 Score=30.76 Aligned_cols=31 Identities=16% Similarity=0.068 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
||||+|+..+..|. .+|+.|.+ ||+|+++..
T Consensus 1 M~~i~iiG~G~~G~-----~~a~~l~~-g~~V~~~~~ 31 (289)
T 2cvz_A 1 MEKVAFIGLGAMGY-----PMAGHLAR-RFPTLVWNR 31 (289)
T ss_dssp -CCEEEECCSTTHH-----HHHHHHHT-TSCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHhC-CCeEEEEeC
Confidence 57899998887775 46888999 999988754
No 311
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=26.05 E-value=21 Score=32.98 Aligned_cols=34 Identities=15% Similarity=0.041 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++.+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 6 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 6 KVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred ccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcC
Confidence 45688888887655 68899999999999999664
No 312
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=26.00 E-value=67 Score=27.06 Aligned_cols=38 Identities=8% Similarity=0.019 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCc---cCHHHHHH-HHHHHHHCC--CeEEEEeCC
Q 011339 9 QPHFVLFPFLAQ---GHMIPMID-TARLLAQHG--AAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~---GHv~p~l~-LA~~L~~rG--H~Vt~~~~~ 46 (488)
||||+++..... |+..-+.. +++.|.++| ++|.++-..
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 578877776544 55555443 466666666 888887543
No 313
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=25.98 E-value=78 Score=24.73 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=23.2
Q ss_pred HHHhcCCCCeEEEEcCCCc--chHHHHHhc---------CCCcEEEecc
Q 011339 113 LLKELTPKPSCIVSDTCYP--WTVDTAARF---------NIPRISFHGF 150 (488)
Q Consensus 113 ~l~~~~~~pD~vv~D~~~~--~~~~~a~~l---------giP~v~~~~~ 150 (488)
.++. .+||+||.|...+ .+..+++.+ .+|.+.++..
T Consensus 53 ~~~~--~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 53 AMAE--EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 3445 6899999998654 455555544 2677776543
No 314
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=25.97 E-value=2.7e+02 Score=24.51 Aligned_cols=40 Identities=8% Similarity=-0.150 Sum_probs=24.0
Q ss_pred HhhHHHHHHHHhcCCCCeEEEEcCCCc-chHHHHHhcCCCcEEE
Q 011339 105 LLQLPLENLLKELTPKPSCIVSDTCYP-WTVDTAARFNIPRISF 147 (488)
Q Consensus 105 ~~~~~l~~~l~~~~~~pD~vv~D~~~~-~~~~~a~~lgiP~v~~ 147 (488)
.+.+.+.++.+. ++|+||.--++. ....+.+.+++|++.+
T Consensus 57 ~l~~~~~~l~~~---g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 57 GVLEQIRAGREQ---GVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HHHHHHHHHHHH---TCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred HHHHHHHHHHHC---CCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 344444444444 899998665544 3345666779998864
No 315
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=25.84 E-value=49 Score=31.68 Aligned_cols=33 Identities=18% Similarity=0.312 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
+..+|+++..+--| +.+|..|+++|++|+++-.
T Consensus 25 ~~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 25 SDKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp TTCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEEC
T ss_pred CCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeC
Confidence 45689999887555 7789999999999999854
No 316
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=25.77 E-value=60 Score=31.72 Aligned_cols=31 Identities=19% Similarity=0.166 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|||+++..|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 689999776666 5688899999999998854
No 317
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=25.77 E-value=1.1e+02 Score=23.55 Aligned_cols=42 Identities=12% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCCc--chHHHHHhc-------CCCcEEEecch
Q 011339 108 LPLENLLKELTPKPSCIVSDTCYP--WTVDTAARF-------NIPRISFHGFS 151 (488)
Q Consensus 108 ~~l~~~l~~~~~~pD~vv~D~~~~--~~~~~a~~l-------giP~v~~~~~~ 151 (488)
.+..+.++. .+||+||.|...+ .+..+++.+ .+|++.++...
T Consensus 38 ~~al~~~~~--~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 38 EEALQQIYK--NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
No 318
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=25.66 E-value=1.9e+02 Score=26.53 Aligned_cols=102 Identities=10% Similarity=0.104 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeC-CcchhhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTT-PANAARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGC 84 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~ 84 (488)
+++||+++..+. || -+.+|..+-.+- ..+|..+.+ ......+ ... .++.++.+|. ..
T Consensus 94 ~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~---A~~-----~gIp~~~~~~---------~~ 153 (292)
T 3lou_A 94 ARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPL---AAQ-----HGLPFRHFPI---------TA 153 (292)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHH---HHH-----TTCCEEECCC---------CS
T ss_pred CCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHH---HHH-----cCCCEEEeCC---------Cc
Confidence 678998888755 55 455555554443 467776654 3222222 122 2777776541 00
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCC-cchHHHHHhcCCCcEEE
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCY-PWTVDTAARFNIPRISF 147 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~-~~~~~~a~~lgiP~v~~ 147 (488)
.. . ....+++.+++++ .+||+||.-.|. .-...+...+.-.++-+
T Consensus 154 ------~~-r---------~~~~~~~~~~l~~--~~~Dlivla~y~~il~~~~l~~~~~~~iNi 199 (292)
T 3lou_A 154 ------DT-K---------AQQEAQWLDVFET--SGAELVILARYMQVLSPEASARLANRAINI 199 (292)
T ss_dssp ------SC-H---------HHHHHHHHHHHHH--HTCSEEEESSCCSCCCHHHHHHTTTSEEEE
T ss_pred ------CC-H---------HHHHHHHHHHHHH--hCCCEEEecCchhhCCHHHHhhhcCCeEEe
Confidence 00 0 0113456677777 699999987764 35555666665555554
No 319
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=25.65 E-value=52 Score=30.46 Aligned_cols=35 Identities=17% Similarity=0.390 Sum_probs=25.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++|||+++. +.|.+ -..|+++|.++||+|+.++-.
T Consensus 12 ~~M~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVLG--ATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 457877764 34433 256789999999999988654
No 320
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=25.55 E-value=45 Score=30.38 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|||.|+..+..|. .+|+.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 5799998877775 578899999999988754
No 321
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=25.47 E-value=2.6e+02 Score=27.16 Aligned_cols=139 Identities=12% Similarity=0.124 Sum_probs=72.5
Q ss_pred CCeEEEEeeCCccCCChHHHHHHHHHHhcCCCCeEEEEeCCCCCchhhhhhhhhHHHHHH---hcCCCeEEecccchhhh
Q 011339 275 PNSVVYVCLGSICNLTSSQMIELGLGLEASKKPFIWVIRGGNNTSKEIQEWLLEEKFEER---VKGRGILILGWAPQVLI 351 (488)
Q Consensus 275 ~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~nv~~~~~~pq~~l 351 (488)
..+.|-|-+||.+. ....+++...++.++..+-..+.+-.| .|+.+.+. +.....
T Consensus 264 ~~~~V~Ii~gs~SD--~~~~~~a~~~l~~~gi~~~v~V~saHR---------~p~~~~~~~~~~~~~g~----------- 321 (425)
T 2h31_A 264 SQCRVVVLMGSTSD--LGHCEKIKKACGNFGIPCELRVTSAHK---------GPDETLRIKAEYEGDGI----------- 321 (425)
T ss_dssp CCCEEEEEESCGGG--HHHHHHHHHHHHHTTCCEEEEECCTTT---------CHHHHHHHHHHHHTTCC-----------
T ss_pred CCCeEEEEecCccc--HHHHHHHHHHHHHcCCceEEeeeeccC---------CHHHHHHHHHHHHHCCC-----------
Confidence 34578888888775 445566677777788776655555543 34332211 111111
Q ss_pred hccCCcccccccCCc----hhHHHHhhcCCCEeecCcccccchhHHHHH-HH--hcceEEecccCCCCCCcccccccccC
Q 011339 352 LSHPSIGGFLTHCSW----NSSLEGISAGVPLITWPLYGDQFWNEKLIV-QV--LNIGVRIGVEVPLDFGEEEEIGVLVK 424 (488)
Q Consensus 352 l~~~~~~~~IthgG~----gs~~eal~~GvP~v~~P~~~DQ~~na~rv~-e~--~G~G~~l~~~~~~~~~~~~~~~~~~~ 424 (488)
..+ +|.=+|. .++..++ .-+|+|.+|....-......++ =+ .|+.+..-.. ..+
T Consensus 322 ---~~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~g~pvatv~~-------------~~n 382 (425)
T 2h31_A 322 ---PTV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLS-------------PEG 382 (425)
T ss_dssp ---CEE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCSSCCCEECCC-------------HHH
T ss_pred ---CeE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCCCCceEEecC-------------chH
Confidence 012 5555554 3444444 5789999998532222222221 02 3333221111 245
Q ss_pred HHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHH
Q 011339 425 KEDVVKAINILMDEGGETDDRRKRAREFQIMAKRA 459 (488)
Q Consensus 425 ~~~l~~ai~~~l~~~~~~~~~~~~a~~l~~~~~~~ 459 (488)
+..++..|. -+.|+ .++++.+..+...+..
T Consensus 383 Aa~~A~~Il-~~~~~----~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 383 SAQFAAQIF-GLSNH----LVWSKLRASILNTWIS 412 (425)
T ss_dssp HHHHHHHHH-HTTCH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-ccCCH----HHHHHHHHHHHHHHHH
Confidence 666665554 34555 7888877777776654
No 322
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=25.46 E-value=69 Score=29.15 Aligned_cols=34 Identities=9% Similarity=0.138 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+++|+++. +.|.+- ..|+++|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVG--GTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 56777764 344442 46789999999999988764
No 323
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=24.98 E-value=3.3e+02 Score=25.59 Aligned_cols=37 Identities=8% Similarity=0.126 Sum_probs=31.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcc
Q 011339 12 FVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPAN 48 (488)
Q Consensus 12 vl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~ 48 (488)
++++..++.|=..=++.++..++..|..|.|+.++..
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s 100 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHA 100 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 4667778999999999999999999999999988743
No 324
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=24.98 E-value=51 Score=33.02 Aligned_cols=34 Identities=9% Similarity=0.051 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|||+++. +.|-+- ..|+++|.++||+|+.++-.
T Consensus 147 ~m~VLVTG--atG~IG--~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITG--SRGLVG--RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEES--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 78988775 333332 46899999999999988754
No 325
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=24.97 E-value=1.5e+02 Score=22.28 Aligned_cols=39 Identities=8% Similarity=0.016 Sum_probs=27.0
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|...+ +++||+++-- +-.-...+.+.|.+.|++|+.+..
T Consensus 1 M~~~~--~~~~ilivdd----~~~~~~~l~~~L~~~g~~v~~~~~ 39 (130)
T 3eod_A 1 MTQPL--VGKQILIVED----EQVFRSLLDSWFSSLGATTVLAAD 39 (130)
T ss_dssp --CTT--TTCEEEEECS----CHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCCCC--CCCeEEEEeC----CHHHHHHHHHHHHhCCceEEEeCC
Confidence 56555 6789988853 455566778888889999887543
No 326
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=24.97 E-value=52 Score=30.46 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=21.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
++|+++. +.|-+= ..|+++|.++||+|+.+.-
T Consensus 10 ~~vlVTG--atGfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 10 KTACVVG--GTGFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CEEEEEC--TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC--CchHHH--HHHHHHHHHCCCEEEEEEc
Confidence 4555543 344332 4688999999999987653
No 327
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=24.97 E-value=75 Score=28.31 Aligned_cols=42 Identities=12% Similarity=-0.029 Sum_probs=32.4
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHHCCCeEEEEeCCcch
Q 011339 8 QQPHFVLFPF--LAQGHMIPMIDTARLLAQHGAAITIVTTPANA 49 (488)
Q Consensus 8 ~~~kvl~~~~--~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (488)
+|+|++.+.. ++-|=..-...||..|+++|++|.++-.....
T Consensus 16 ~~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 16 KIKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp TCSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred cCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4566655543 57888888999999999999999998665443
No 328
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=24.75 E-value=2.9e+02 Score=24.52 Aligned_cols=34 Identities=15% Similarity=-0.022 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
-|+++++.++.| ==..+|++|+++|++|.++...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 356677665543 2357899999999999888743
No 329
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=24.71 E-value=66 Score=29.62 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=24.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++++|+++. +.|.+= ..|+++|.++||+|+.+.-.
T Consensus 10 ~~~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 10 EGSLVLVTG--ANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEC--CccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 456776663 344432 56789999999999987654
No 330
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=24.70 E-value=72 Score=28.13 Aligned_cols=37 Identities=5% Similarity=0.196 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCc--cCHHHHHH-HHHHHHHC-CCeEEEEeC
Q 011339 9 QPHFVLFPFLAQ--GHMIPMID-TARLLAQH-GAAITIVTT 45 (488)
Q Consensus 9 ~~kvl~~~~~~~--GHv~p~l~-LA~~L~~r-GH~Vt~~~~ 45 (488)
||||+++..... |+..-+.. +++.|.++ |++|.++..
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl 41 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTP 41 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 578988776543 66555544 46666666 999988854
No 331
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=24.59 E-value=74 Score=26.42 Aligned_cols=34 Identities=18% Similarity=0.445 Sum_probs=27.1
Q ss_pred EEEEEcCCCcc-----CHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 11 HFVLFPFLAQG-----HMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 11 kvl~~~~~~~G-----Hv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|+++| +|| -..+...|++.|.++|.+|.|..+|
T Consensus 25 ~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 25 KVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp EEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 466665 344 2457899999999999999999888
No 332
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=24.30 E-value=52 Score=30.49 Aligned_cols=33 Identities=9% Similarity=0.207 Sum_probs=22.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
||+|+++. +.|-+ -..|+++|.++||+|+.+.-
T Consensus 1 M~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 1 MAKLLITG--GCGFL--GSNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp -CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CcEEEEeC--CCchh--HHHHHHHHHhCCCEEEEEeC
Confidence 45666654 33433 25688999999999998863
No 333
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=24.27 E-value=24 Score=32.15 Aligned_cols=27 Identities=7% Similarity=-0.024 Sum_probs=23.2
Q ss_pred ccccccCCchhHHHHhhc------CCCEeecCc
Q 011339 358 GGFLTHCSWNSSLEGISA------GVPLITWPL 384 (488)
Q Consensus 358 ~~~IthgG~gs~~eal~~------GvP~v~~P~ 384 (488)
+++|.=||=||+.+++.. ++|++.+|.
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 449999999999998764 889999886
No 334
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=24.23 E-value=69 Score=28.50 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=29.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 11 HFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 11 kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|+|..-|+-|-..-...||..|+++|++|.++-..
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 355555678889999999999999999999998443
No 335
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=24.13 E-value=76 Score=26.45 Aligned_cols=34 Identities=21% Similarity=0.534 Sum_probs=27.1
Q ss_pred EEEEEcCCCcc-----CHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 11 HFVLFPFLAQG-----HMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 11 kvl~~~~~~~G-----Hv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|+++| +|| -..+...|++.|.++|.+|.|..+|
T Consensus 24 ~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 24 SIIITP--GYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp EEEEEE--CHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 566665 333 2457899999999999999999888
No 336
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=23.98 E-value=71 Score=27.09 Aligned_cols=37 Identities=8% Similarity=-0.004 Sum_probs=25.2
Q ss_pred CCEEEEEcCCC--ccCHHHHHH-HHHH-HHHCCCeEEEEeC
Q 011339 9 QPHFVLFPFLA--QGHMIPMID-TARL-LAQHGAAITIVTT 45 (488)
Q Consensus 9 ~~kvl~~~~~~--~GHv~p~l~-LA~~-L~~rGH~Vt~~~~ 45 (488)
||||+++.... .|+..-+.. +++. |.++|++|.++-.
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 56888777653 466655555 4566 7778999988754
No 337
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=23.97 E-value=52 Score=32.44 Aligned_cols=32 Identities=19% Similarity=0.217 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|||.++..|..| +.+|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 789999776555 57899999999999988553
No 338
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=23.92 E-value=82 Score=27.28 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|+++++.++.| ==..+|++|+++|++|.++.-.
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777765543 2357899999999998887653
No 339
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=23.81 E-value=34 Score=31.20 Aligned_cols=34 Identities=6% Similarity=0.019 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEE-EeC
Q 011339 7 CQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITI-VTT 45 (488)
Q Consensus 7 ~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~-~~~ 45 (488)
+++.+|+++-.+..| +..|..|+++||+|++ +-.
T Consensus 2 ~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~li~e~ 36 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAG-----LSAGLYATRGGLKNVVMFEK 36 (315)
T ss_dssp CSCEEEEEECCSHHH-----HHHHHHHHHHTCSCEEEECS
T ss_pred CCCceEEEECCCHHH-----HHHHHHHHHCCCCeEEEEeC
Confidence 477899999876554 6778889999999999 543
No 340
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=23.78 E-value=73 Score=27.14 Aligned_cols=37 Identities=5% Similarity=0.099 Sum_probs=22.8
Q ss_pred CCEEEEEcCCCc----cCHHHHHH-HHHHHHHCC--CeEEEEeC
Q 011339 9 QPHFVLFPFLAQ----GHMIPMID-TARLLAQHG--AAITIVTT 45 (488)
Q Consensus 9 ~~kvl~~~~~~~----GHv~p~l~-LA~~L~~rG--H~Vt~~~~ 45 (488)
||||+++..... |+..-+.. +++.|.++| ++|.++-.
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 578877765443 55554443 466666777 89888743
No 341
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=23.75 E-value=90 Score=28.77 Aligned_cols=33 Identities=9% Similarity=0.229 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC-C-CeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH-G-AAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r-G-H~Vt~~~~~ 46 (488)
++|||+++..+.. .++++.|++. | ++|..+...
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 5689999866654 4789999986 7 888777554
No 342
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=23.49 E-value=1e+02 Score=26.81 Aligned_cols=39 Identities=10% Similarity=0.026 Sum_probs=28.1
Q ss_pred CCCEEEEEcCCCcc----CHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQG----HMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~G----Hv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|.+|.+++....+ +..-...|++.|+++|+.|.+-..+
T Consensus 8 ~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 8 RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp SCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 45579999765554 2345778888999999988776554
No 343
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=23.49 E-value=1.7e+02 Score=30.42 Aligned_cols=36 Identities=8% Similarity=-0.030 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcchh
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANAA 50 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (488)
.||+++..+ . -.+.+++++++.|+++..+.+..+..
T Consensus 29 ~kILI~g~G---e--ia~~iiraar~lGi~~vav~s~~d~~ 64 (675)
T 3u9t_A 29 QRLLVANRG---E--IACRVMRSARALGIGSVAVHSDIDRH 64 (675)
T ss_dssp SEEEECCCH---H--HHHHHHHHHHHHTCEEEEEECSGGGG
T ss_pred CEEEEECCC---H--HHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 466666543 2 26788999999999998887654433
No 344
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=23.45 E-value=1e+02 Score=29.10 Aligned_cols=33 Identities=3% Similarity=-0.201 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|.||+++..+ .....++++|++.||+|.++.+.
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~ 33 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPT 33 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578888764 23567888899999999988774
No 345
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=23.33 E-value=34 Score=31.42 Aligned_cols=31 Identities=6% Similarity=-0.034 Sum_probs=25.1
Q ss_pred hccCCcccccccCCchhHHHHhhc----CCCEeecCc
Q 011339 352 LSHPSIGGFLTHCSWNSSLEGISA----GVPLITWPL 384 (488)
Q Consensus 352 l~~~~~~~~IthgG~gs~~eal~~----GvP~v~~P~ 384 (488)
-..+++ +|.=||=||+.+++.. ++|++.++.
T Consensus 61 ~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 61 GQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred ccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 344566 9999999999999743 789999984
No 346
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=23.16 E-value=59 Score=30.22 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=24.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
++++|+++. +.|-+ -..|+++|.++||+|+.+.-
T Consensus 26 ~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 26 DRKRILITG--GAGFV--GSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp -CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEc--CccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 567777764 34433 25788999999999998864
No 347
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=23.14 E-value=67 Score=31.74 Aligned_cols=33 Identities=15% Similarity=0.096 Sum_probs=26.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH--GAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r--GH~Vt~~~~ 45 (488)
++|||.++..|..| ..+|..|+++ ||+|+++..
T Consensus 4 ~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 4 EIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 56899999877776 4678889988 899998854
No 348
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=23.10 E-value=55 Score=32.56 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=27.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
-.|||.++..|..| +.+|..|+++||+|+++..
T Consensus 7 ~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 7 GSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 36899999887776 5689999999999999854
No 349
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=23.08 E-value=1.4e+02 Score=22.85 Aligned_cols=39 Identities=13% Similarity=0.171 Sum_probs=24.6
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|...+ ++++|+++- .+-.-...|.+.|.+.|++|..+..
T Consensus 1 M~~~~--~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (142)
T 3cg4_A 1 MSLAE--HKGDVMIVD----DDAHVRIAVKTILSDAGFHIISADS 39 (142)
T ss_dssp -------CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCC--CCCeEEEEc----CCHHHHHHHHHHHHHCCeEEEEeCC
Confidence 55444 778888875 3455566778888888998775544
No 350
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=23.00 E-value=42 Score=33.61 Aligned_cols=34 Identities=9% Similarity=0.186 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.+.||+++..+.-| +.+|+.|.++|++||++...
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 56799999876555 57899999999999999765
No 351
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=22.96 E-value=86 Score=28.60 Aligned_cols=38 Identities=16% Similarity=0.268 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCCccCHHHH--HHHHHHHHHCC-CeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPM--IDTARLLAQHG-AAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~--l~LA~~L~~rG-H~Vt~~~~~ 46 (488)
++.|||+++- ..+|-.+. -.|++.|.+.| .+|++...+
T Consensus 3 ~~~kvLiv~G-~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLITG-QNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEES-CCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEcC-CCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 7899999954 44886553 57788888888 999999764
No 352
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=22.88 E-value=1.8e+02 Score=28.23 Aligned_cols=32 Identities=16% Similarity=0.015 Sum_probs=23.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQH-GAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~r-GH~Vt~~~~~ 46 (488)
|||+++..++ ...++++.|+++ |++++++.+.
T Consensus 25 ~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~~ 57 (452)
T 2qk4_A 25 ARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAPG 57 (452)
T ss_dssp EEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEEC
T ss_pred cEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEECC
Confidence 6899988763 356778888765 8887776543
No 353
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=22.66 E-value=77 Score=25.15 Aligned_cols=36 Identities=19% Similarity=0.144 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHH-HHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMI-DTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l-~LA~~L~~rGH~Vt~~~~ 45 (488)
|||+++-....|+..-+. .|++.|.++|++|.++..
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 578777776778765543 345666667999987744
No 354
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=22.60 E-value=79 Score=26.58 Aligned_cols=37 Identities=5% Similarity=-0.099 Sum_probs=22.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHH---CCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQ---HGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~---rGH~Vt~~~~ 45 (488)
.+|||+++......+ .-+..||+.+++ .|++|.++-.
T Consensus 5 ~~Mkilii~gS~r~~-g~t~~la~~i~~~l~~g~~v~~~dl 44 (193)
T 1rtt_A 5 DDIKVLGISGSLRSG-SYNSAALQEAIGLVPPGMSIELADI 44 (193)
T ss_dssp --CEEEEEESCCSTT-CHHHHHHHHHHTTCCTTCEEEECCC
T ss_pred CCceEEEEECCCCCC-ChHHHHHHHHHHhccCCCeEEEEeH
Confidence 567998887655422 345666776665 3778777643
No 355
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=22.53 E-value=47 Score=28.87 Aligned_cols=28 Identities=14% Similarity=0.285 Sum_probs=22.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 011339 12 FVLFPFLAQGHMIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 12 vl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
|+++--+--| +.+|..|+++|++|+++=
T Consensus 5 V~IIGaGpaG-----L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAG-----LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHH-----HHHHHHHHHCCCCEEEEE
Confidence 6777665444 789999999999999994
No 356
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=22.41 E-value=1.4e+02 Score=28.72 Aligned_cols=35 Identities=14% Similarity=-0.009 Sum_probs=26.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
.++||+++..+ .-...++++++++||+|..+....
T Consensus 18 ~~~~ili~g~g-----~~g~~~~~a~~~~G~~v~~v~~~~ 52 (433)
T 2dwc_A 18 SAQKILLLGSG-----ELGKEIAIEAQRLGVEVVAVDRYA 52 (433)
T ss_dssp TCCEEEEESCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEECCC
Confidence 46799999553 235678899999999998887653
No 357
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=22.38 E-value=67 Score=28.03 Aligned_cols=39 Identities=15% Similarity=0.030 Sum_probs=31.3
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHHC-CCeEEEEeCC
Q 011339 8 QQPHFVLFPF--LAQGHMIPMIDTARLLAQH-GAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~--~~~GHv~p~l~LA~~L~~r-GH~Vt~~~~~ 46 (488)
+++|++.+.. ++-|-..-...||..|+++ |++|.++-..
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 4667655543 6888888999999999999 9999999665
No 358
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=22.32 E-value=2.3e+02 Score=24.97 Aligned_cols=35 Identities=20% Similarity=0.167 Sum_probs=25.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
.+.|+++++.++.| ==..+|++|+++|++|.+...
T Consensus 24 ~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 24 SDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 34567777765443 246889999999999987744
No 359
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=22.26 E-value=31 Score=32.05 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=24.0
Q ss_pred hccCCcccccccCCchhHHHHhhc----CCCEeecCc
Q 011339 352 LSHPSIGGFLTHCSWNSSLEGISA----GVPLITWPL 384 (488)
Q Consensus 352 l~~~~~~~~IthgG~gs~~eal~~----GvP~v~~P~ 384 (488)
...+++ +|.-||-||+++++.. ++|++.++.
T Consensus 73 ~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 344566 9999999999999754 899999875
No 360
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=22.25 E-value=82 Score=29.63 Aligned_cols=34 Identities=6% Similarity=-0.248 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
|.||+++..+ .-...++++|+++||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4578888643 446788999999999999887653
No 361
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=22.23 E-value=59 Score=30.77 Aligned_cols=33 Identities=15% Similarity=0.058 Sum_probs=26.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
++++|+++..+--| +.+|..|+++|++|+++-.
T Consensus 10 ~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 10 KTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 34689998876555 7889999999999999853
No 362
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=22.03 E-value=1.3e+02 Score=26.38 Aligned_cols=42 Identities=24% Similarity=0.176 Sum_probs=27.4
Q ss_pred CCCCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 1 MASEGSCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 1 m~~~~~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|..+++ -+.|+++++.++.| ==..+|++|+++|++|.++...
T Consensus 1 M~~~~~-l~gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 1 MSQFMN-LEGKVALVTGASRG---IGKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp -CCTTC-CTTCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CccccC-CCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 444432 23467777765543 2357899999999999887653
No 363
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=21.97 E-value=90 Score=27.53 Aligned_cols=36 Identities=3% Similarity=-0.082 Sum_probs=25.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|.|.++++.++.| =-..+|++|+++|++|.++.-.
T Consensus 20 ~m~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 20 HMSKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp --CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 45677777765532 2368899999999998887654
No 364
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=21.97 E-value=2e+02 Score=21.88 Aligned_cols=48 Identities=10% Similarity=-0.023 Sum_probs=29.3
Q ss_pred cCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHc
Q 011339 375 AGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMD 437 (488)
Q Consensus 375 ~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~ 437 (488)
..+|+|++--..|.. ......+..|+--.+.+. ++.++|..+|++++.
T Consensus 71 ~~~~ii~~s~~~~~~-~~~~~~~~~ga~~~l~KP--------------~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 71 PETVRIIITGYTDSA-SMMAAINDAGIHQFLTKP--------------WHPEQLLSSARNAAR 118 (139)
T ss_dssp TTSEEEEEESCTTCH-HHHHHHHHTTCCEEEESS--------------CCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChH-HHHHHHHhhchhhhccCC--------------CCHHHHHHHHHHHHH
Confidence 456777765444433 333332233454455554 899999999999885
No 365
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=21.90 E-value=1e+02 Score=27.50 Aligned_cols=39 Identities=18% Similarity=0.153 Sum_probs=26.9
Q ss_pred HHHHHHHhcCCCCeEEEEcCCCc-------chHHHHHhcCCCcEEE
Q 011339 109 PLENLLKELTPKPSCIVSDTCYP-------WTVDTAARFNIPRISF 147 (488)
Q Consensus 109 ~l~~~l~~~~~~pD~vv~D~~~~-------~~~~~a~~lgiP~v~~ 147 (488)
.+.+.++....+||++++|..-. -|..+.-.+++|+|-+
T Consensus 98 ~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 98 LIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 34444444335899999998643 3566677788999886
No 366
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=21.89 E-value=61 Score=29.14 Aligned_cols=31 Identities=16% Similarity=0.052 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|||+|+..+..| ..+|+.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 578888776555 4578899999999988754
No 367
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=21.87 E-value=87 Score=26.63 Aligned_cols=34 Identities=18% Similarity=0.445 Sum_probs=26.8
Q ss_pred EEEEEcCCCcc-----CHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 11 HFVLFPFLAQG-----HMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 11 kvl~~~~~~~G-----Hv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|+++| +|| -..+...|++.|.++|.+|.|..+|
T Consensus 48 ~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 48 KVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp EEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cEEEEc--CchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 466665 343 2457889999999999999999888
No 368
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=21.86 E-value=85 Score=26.20 Aligned_cols=37 Identities=11% Similarity=0.070 Sum_probs=27.8
Q ss_pred CEEEEEcCCCcc----CHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQG----HMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~G----Hv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.+|.+++....+ +..-...|++.|+++|+.|..-..+
T Consensus 2 ~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~ 42 (171)
T 1weh_A 2 RLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQ 42 (171)
T ss_dssp EEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSS
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh
Confidence 468888876554 4566788899999999888776654
No 369
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=21.80 E-value=2.7e+02 Score=24.43 Aligned_cols=35 Identities=26% Similarity=0.195 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+.|.++++.++.| + =..+|++|+++|++|.++...
T Consensus 25 ~~k~vlVTGas~g-I--G~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 25 MSRSVLVTGASKG-I--GRAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp CCCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 4567777765543 2 358899999999999876654
No 370
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=21.75 E-value=79 Score=28.64 Aligned_cols=34 Identities=12% Similarity=0.135 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|++|+++.. .|.+- ..|+++|.++||+|+.++-.
T Consensus 4 ~~~ilVtGa--tG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIGA--TGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEEST--TSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEcC--CcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 567776653 33332 46789999999999887654
No 371
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=21.75 E-value=73 Score=27.59 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=23.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
||+++++.++.| ==..+|++|+++|++|.++.-.
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466666665532 2367899999999998887653
No 372
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=21.70 E-value=1.9e+02 Score=24.08 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=35.3
Q ss_pred CCEEEEEcCCC---ccCH--HHHHHHHHHHHHCCCeEEEEe-CCcchhhhHHHHHhh
Q 011339 9 QPHFVLFPFLA---QGHM--IPMIDTARLLAQHGAAITIVT-TPANAARFKTVVARA 59 (488)
Q Consensus 9 ~~kvl~~~~~~---~GHv--~p~l~LA~~L~~rGH~Vt~~~-~~~~~~~~~~~~~~~ 59 (488)
+||+.+++.+. .|.+ .....|++.|.+.|++|.... .+++.+.+++.+...
T Consensus 3 ~~~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a 59 (172)
T 3kbq_A 3 AKNASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVA 59 (172)
T ss_dssp -CEEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCEEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHH
Confidence 48898888773 3543 234568999999999998764 366777777666543
No 373
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=21.63 E-value=39 Score=33.82 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
...+|+++..+.-| +.+|..|+++|++|+++-..
T Consensus 6 ~~~dVvIVGgG~aG-----l~aA~~La~~G~~V~liE~~ 39 (512)
T 3e1t_A 6 EVFDLIVIGGGPGG-----STLASFVAMRGHRVLLLERE 39 (512)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred ccCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEccC
Confidence 45689999887665 77888999999999999543
No 374
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=21.62 E-value=61 Score=31.01 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+.++|+++..+.. -+..|..|+++||+|+++-..
T Consensus 2 ~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 2 KSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESS
T ss_pred CcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEec
Confidence 4578998877643 467899999999999999653
No 375
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=21.55 E-value=29 Score=31.36 Aligned_cols=29 Identities=10% Similarity=0.273 Sum_probs=24.0
Q ss_pred cCCcccccccCCchhHHHHhhc---CCCEeecCc
Q 011339 354 HPSIGGFLTHCSWNSSLEGISA---GVPLITWPL 384 (488)
Q Consensus 354 ~~~~~~~IthgG~gs~~eal~~---GvP~v~~P~ 384 (488)
.+++ +|+=||=||+++++.. ++|++.++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~ 72 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA 72 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC
Confidence 3455 9999999999999876 788888874
No 376
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=21.54 E-value=88 Score=26.98 Aligned_cols=36 Identities=11% Similarity=0.056 Sum_probs=27.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 11 HFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 11 kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
..+++..+..|+..-...++..|.++|++|..+-.+
T Consensus 13 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 48 (267)
T 3sty_A 13 KHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLG 48 (267)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccc
Confidence 455555566677777789999999999998877554
No 377
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=21.54 E-value=1.3e+02 Score=25.87 Aligned_cols=37 Identities=8% Similarity=-0.012 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCccC----HHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGH----MIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GH----v~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
.+++|.+++... +. ..-...|++.|+++|+.|.+-..
T Consensus 21 ~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG 61 (199)
T 3qua_A 21 RQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGG 61 (199)
T ss_dssp CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 457899997655 43 34457888999999999877543
No 378
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=21.53 E-value=88 Score=28.89 Aligned_cols=39 Identities=8% Similarity=0.179 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIP-MIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p-~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|+||+++.-+..++... ...+.+.|.++|++|.+..+.
T Consensus 3 ~m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 42 (307)
T 1u0t_A 3 AHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAE 42 (307)
T ss_dssp --CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC--
T ss_pred CCCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecch
Confidence 456899999998887654 667889999999998876443
No 379
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=21.52 E-value=87 Score=23.89 Aligned_cols=37 Identities=0% Similarity=-0.187 Sum_probs=23.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVT 44 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~ 44 (488)
++|||+++|..+.+--.=.-.+=++..++|.+|.+..
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 7899999998775433323333333344688888754
No 380
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=21.49 E-value=3.2e+02 Score=24.21 Aligned_cols=33 Identities=30% Similarity=0.218 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
-|+++++..+.| ==..+|++|+++|++|.++.-
T Consensus 11 ~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG---QGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEec
Confidence 467777776544 246889999999999988743
No 381
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=21.43 E-value=41 Score=31.94 Aligned_cols=38 Identities=3% Similarity=0.007 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCccCH----HHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHM----IPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv----~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
++|||+++..+...-. .-...++++|.++||+|..+..
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 4678988886533332 2346788999999999998854
No 382
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=21.41 E-value=1.2e+02 Score=22.57 Aligned_cols=48 Identities=10% Similarity=0.094 Sum_probs=35.2
Q ss_pred hcCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHcc
Q 011339 374 SAGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDE 438 (488)
Q Consensus 374 ~~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~ 438 (488)
...+|+|++ ..+......+. .+.|+--.+.+. ++.++|.++|++++..
T Consensus 78 ~~~~~ii~~--~~~~~~~~~~~-~~~g~~~~l~kp--------------~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 78 LKNVPIVII--GNPDGFAQHRK-LKAHADEYVAKP--------------VDADQLVERAGALIGF 125 (127)
T ss_dssp TTTSCEEEE--ECGGGHHHHHH-STTCCSEEEESS--------------CCHHHHHHHHHHHHCC
T ss_pred ccCCCEEEE--ecCCchhHHHH-HHhCcchheeCC--------------CCHHHHHHHHHHHHcC
Confidence 357899998 44445555666 478876667654 8999999999998864
No 383
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=21.41 E-value=89 Score=26.64 Aligned_cols=34 Identities=21% Similarity=0.529 Sum_probs=26.8
Q ss_pred EEEEEcCCCcc-----CHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 11 HFVLFPFLAQG-----HMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 11 kvl~~~~~~~G-----Hv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+|+++| +|| -..+...|++.|.++|.+|.|..+|
T Consensus 47 ~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 47 SIIITP--GYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp EEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eEEEEC--CchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 566665 344 2457889999999999999999887
No 384
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=21.37 E-value=1.3e+02 Score=27.67 Aligned_cols=40 Identities=15% Similarity=0.138 Sum_probs=29.0
Q ss_pred CCCEEEEEcCCCccC--H-HHHHHHHHHHHHCCCeEEEEeCCc
Q 011339 8 QQPHFVLFPFLAQGH--M-IPMIDTARLLAQHGAAITIVTTPA 47 (488)
Q Consensus 8 ~~~kvl~~~~~~~GH--v-~p~l~LA~~L~~rGH~Vt~~~~~~ 47 (488)
+|+|++++..|..|. . .-.-.+...|.++|+++++..+..
T Consensus 7 ~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~ 49 (304)
T 3s40_A 7 KFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE 49 (304)
T ss_dssp SCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS
T ss_pred CCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC
Confidence 678888888885554 2 234567788889999999886653
No 385
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=21.36 E-value=61 Score=29.48 Aligned_cols=32 Identities=6% Similarity=-0.027 Sum_probs=26.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 578888887666 67899999999999999654
No 386
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=21.35 E-value=1.9e+02 Score=26.41 Aligned_cols=110 Identities=10% Similarity=0.035 Sum_probs=0.0
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCcch-hhhHHHHHhhhcCCCCeEEEEeeCCccccCCCCCC
Q 011339 6 SCQQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTPANA-ARFKTVVARAMQSGLPLQLIEIQFPYQEAGVPEGC 84 (488)
Q Consensus 6 ~~~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~ 84 (488)
+.+++||+++..+. || -+.+|.++-.+-...+.+..--++. +.+....... ++.++.+|
T Consensus 86 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~-----gIp~~~~~------------ 145 (288)
T 3obi_A 86 RETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFG-----DIPFYHFP------------ 145 (288)
T ss_dssp TTSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTT-----TCCEEECC------------
T ss_pred cCCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHc-----CCCEEEeC------------
Q ss_pred ccccCCCchhhHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEcCCCc-chHHHHHhcCCCcEEEecc
Q 011339 85 ENFDMLHSTDLVSNFFKSLRLLQLPLENLLKELTPKPSCIVSDTCYP-WTVDTAARFNIPRISFHGF 150 (488)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vv~D~~~~-~~~~~a~~lgiP~v~~~~~ 150 (488)
.-...-....+++.+++++ .+||+||.-.|.- -...+...+.-.++-+.++
T Consensus 146 -------------~~~~~r~~~~~~~~~~l~~--~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 146 -------------VNKDTRRQQEAAITALIAQ--THTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp -------------CCTTTHHHHHHHHHHHHHH--HTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -------------CCcccHHHHHHHHHHHHHh--cCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
No 387
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=21.32 E-value=51 Score=30.91 Aligned_cols=38 Identities=5% Similarity=-0.089 Sum_probs=27.3
Q ss_pred CCCEEEEEcCCCccCHH----HHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMI----PMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~----p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
+++||+++..+..+-.. -...++++|.+.||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 46789888755333222 456789999999999998754
No 388
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=21.31 E-value=56 Score=31.38 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
|+|+++-.+..| +..|..|+++|++|+++--
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFER 31 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeC
Confidence 467777776655 7889999999999999943
No 389
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.27 E-value=3.4e+02 Score=24.03 Aligned_cols=33 Identities=24% Similarity=0.164 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
-|+++++..+.| ==..+|++|+++|++|.++..
T Consensus 15 gk~~lVTGas~g---IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 15 GRVAFITGAARG---QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 367777765543 235789999999999998753
No 390
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=21.25 E-value=44 Score=29.19 Aligned_cols=20 Identities=15% Similarity=0.091 Sum_probs=16.8
Q ss_pred HHHHHHHHHCC-CeEEEEeCC
Q 011339 27 IDTARLLAQHG-AAITIVTTP 46 (488)
Q Consensus 27 l~LA~~L~~rG-H~Vt~~~~~ 46 (488)
..|+++|+++| |+|+.+.-.
T Consensus 37 ~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 37 RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp HHHHHHHTTCTTEEEEEEESS
T ss_pred HHHHHHHHhCCCceEEEEEcC
Confidence 57899999999 999988654
No 391
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=21.24 E-value=1e+02 Score=28.19 Aligned_cols=39 Identities=5% Similarity=0.038 Sum_probs=30.5
Q ss_pred CCCEE-EEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHF-VLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kv-l~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+++|+ +|+.-|+-|=..-...||..|+++|++|.++-..
T Consensus 39 ~~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 39 TGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34555 5555568888888999999999999999998554
No 392
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=21.14 E-value=1e+02 Score=27.82 Aligned_cols=39 Identities=18% Similarity=0.096 Sum_probs=31.9
Q ss_pred CCCEEEEEcC--CCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPF--LAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~--~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+++|+++++. |+-|-..-...||..|+++|.+|.++-..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4567766654 68888888999999999999999999665
No 393
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=21.10 E-value=69 Score=27.98 Aligned_cols=27 Identities=22% Similarity=0.267 Sum_probs=21.8
Q ss_pred CCEEEEEcCCCccC--HHHHHHHHHHHHH
Q 011339 9 QPHFVLFPFLAQGH--MIPMIDTARLLAQ 35 (488)
Q Consensus 9 ~~kvl~~~~~~~GH--v~p~l~LA~~L~~ 35 (488)
|+||+++.|.-+|. +||...++++|..
T Consensus 1 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~ 29 (215)
T 3lac_A 1 MKTVLLTGFDPFGGESINPAWEVAKSLHE 29 (215)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHTTTT
T ss_pred CCEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 56899998864443 7999999999987
No 394
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=21.08 E-value=2.3e+02 Score=23.31 Aligned_cols=48 Identities=13% Similarity=-0.044 Sum_probs=33.4
Q ss_pred cCCCEeecCcccccchhHHHHHHHhcceEEecccCCCCCCcccccccccCHHHHHHHHHHHHcc
Q 011339 375 AGVPLITWPLYGDQFWNEKLIVQVLNIGVRIGVEVPLDFGEEEEIGVLVKKEDVVKAINILMDE 438 (488)
Q Consensus 375 ~GvP~v~~P~~~DQ~~na~rv~e~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~~l~~ 438 (488)
..+|+|++--..| ...+..+ -+.|+--.+.+. ++.++|..+|..++..
T Consensus 78 ~~~~ii~lt~~~~-~~~~~~a-~~~ga~~~l~KP--------------~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 78 PRTTLVALVEYES-PAVLSQI-IELECHGVITQP--------------LDAHRVLPVLVSARRI 125 (196)
T ss_dssp TTCEEEEEECCCS-HHHHHHH-HHHTCSEEEESS--------------CCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCC-hHHHHHH-HHcCCCeeEecC--------------cCHHHHHHHHHHHHHH
Confidence 4678877755444 3456666 378887667654 7888999999888753
No 395
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=21.03 E-value=1.1e+02 Score=25.82 Aligned_cols=36 Identities=22% Similarity=0.063 Sum_probs=29.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
..++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 346677777888888899999999999999887754
No 396
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=21.02 E-value=49 Score=31.85 Aligned_cols=33 Identities=6% Similarity=-0.014 Sum_probs=26.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQH-GAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~r-GH~Vt~~~~ 45 (488)
++.+|+++..+.. -+..|..|+++ |++|+++--
T Consensus 6 ~~~~v~IiGaG~~-----Gl~aA~~L~~~~g~~v~v~E~ 39 (399)
T 1v0j_A 6 ARFDLFVVGSGFF-----GLTIAERVATQLDKRVLVLER 39 (399)
T ss_dssp CSCSEEEECCSHH-----HHHHHHHHHHHSCCCEEEECS
T ss_pred ccCCEEEECCCHH-----HHHHHHHHHHhCCCCEEEEeC
Confidence 5678999887644 37889999999 999999843
No 397
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=21.01 E-value=1.9e+02 Score=23.34 Aligned_cols=38 Identities=5% Similarity=0.087 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+.+||+++.++..- ..-+....+.|.+.|++|.+++..
T Consensus 1 ~~~ki~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 1 ASMKVLFLSADGFE-DLELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCCEEEEECCTTBC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEeCCCcc-HHHHHHHHHHHHHCCCEEEEEECC
Confidence 35789999887553 344666778888999999999875
No 398
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=20.95 E-value=1.6e+02 Score=25.97 Aligned_cols=33 Identities=27% Similarity=0.223 Sum_probs=22.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 11 HFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 11 kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
|+++++..+.| + =..++++|+++||+|+++.-.
T Consensus 8 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAAQG-I--GRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCc-H--HHHHHHHHHHCCCEEEEEECC
Confidence 45555544332 2 357899999999999887643
No 399
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.94 E-value=48 Score=27.63 Aligned_cols=33 Identities=9% Similarity=0.073 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCC
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQH-GAAITIVTTP 46 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~r-GH~Vt~~~~~ 46 (488)
.+||+++..+..| ..+|+.|.++ ||+|+++...
T Consensus 39 ~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECC
Confidence 5689988654443 5678999999 9999998654
No 400
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=20.78 E-value=1e+02 Score=27.89 Aligned_cols=36 Identities=17% Similarity=0.186 Sum_probs=29.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 11 HFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 11 kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|+|..-|+-|-..-...||..|+++|++|.++-..
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 355555578899999999999999999999998443
No 401
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=20.72 E-value=2.1e+02 Score=30.08 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=35.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
++.||++.+.+..+|-.-..-++..|...|++|......
T Consensus 603 ~r~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~ 641 (762)
T 2xij_A 603 RRPRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLF 641 (762)
T ss_dssp SCCEEEEECCSSCCCCHHHHHHHHHHHHTTCEEEECCTT
T ss_pred CCCEEEEEecCcchhhHHHHHHHHHHHhCCeEEeeCCCC
Confidence 678999999999999999999999999999999876554
No 402
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=20.71 E-value=1.8e+02 Score=24.34 Aligned_cols=38 Identities=5% Similarity=-0.001 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+++||+++.+++.. ..-+....+.|.+.|++|++++..
T Consensus 22 ~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 59 (193)
T 1oi4_A 22 LSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQ 59 (193)
T ss_dssp CCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECC
Confidence 56789999887654 334566778888999999999876
No 403
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=20.66 E-value=32 Score=33.20 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEe
Q 011339 9 QPHFVLFPFLAQGHMIPMIDTARLLAQ-HGAAITIVT 44 (488)
Q Consensus 9 ~~kvl~~~~~~~GHv~p~l~LA~~L~~-rGH~Vt~~~ 44 (488)
+|||+++..|..|. .+|..|++ .||+|+++.
T Consensus 2 ~mkI~ViGaG~~G~-----~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAH-----TLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECCCHHHH-----HHHHHHHhCCCCEEEEEe
Confidence 47999998887775 56888888 499999986
No 404
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=20.65 E-value=36 Score=30.41 Aligned_cols=33 Identities=9% Similarity=0.042 Sum_probs=25.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCC----CeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHG----AAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rG----H~Vt~~~~ 45 (488)
++|||.|+..+..|. .+|+.|+++| |+|+++..
T Consensus 3 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp SSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 568999998876665 4788899899 89988754
No 405
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=20.57 E-value=3.8e+02 Score=23.47 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
-|+++++..+.| ==..+|++|+++|++|.++.-
T Consensus 11 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 11 DKVVVISGVGPA---LGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 357777765544 236789999999999988755
No 406
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=20.48 E-value=1.1e+02 Score=27.66 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=31.7
Q ss_pred hHHHHHHHHhcCCCCeEEEEcCCCc------chHHHHHhcCCCcEEEecc
Q 011339 107 QLPLENLLKELTPKPSCIVSDTCYP------WTVDTAARFNIPRISFHGF 150 (488)
Q Consensus 107 ~~~l~~~l~~~~~~pD~vv~D~~~~------~~~~~a~~lgiP~v~~~~~ 150 (488)
...|..+++. .+||+||+-.... .+..+|..||+|.++..+.
T Consensus 101 a~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 101 GRILTEVIKK--EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHH--HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3455566666 5899999877542 5788999999999987544
No 407
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=20.46 E-value=61 Score=25.66 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=25.0
Q ss_pred cCHHHHHHHHHHHHHCCCeEEEEeCCcchhhh
Q 011339 21 GHMIPMIDTARLLAQHGAAITIVTTPANAARF 52 (488)
Q Consensus 21 GHv~p~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (488)
||.+..-.|-+.|.++|.+..+++.+.+...+
T Consensus 1 ~~m~Rl~~l~~~m~~~glDa~li~~~~ni~Yl 32 (140)
T 3i7m_A 1 GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYL 32 (140)
T ss_dssp ---CHHHHHHHHHHHTTCSEEEECCHHHHHHH
T ss_pred CcchHHHHHHHHHHHcCCCEEEECCCCcceee
Confidence 78888889999999999999999988665554
No 408
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=20.32 E-value=3.8e+02 Score=24.06 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
.|+++++.++.| ==..+|++|+++|++|.++..
T Consensus 28 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 28 GKVAFITGAARG---QGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEec
Confidence 367777766543 236789999999999998754
No 409
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=20.24 E-value=1e+02 Score=27.02 Aligned_cols=34 Identities=9% Similarity=-0.007 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|+++++.++.| -=..+|++|+++|++|.++.-.
T Consensus 2 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 2 NRGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356677665543 2357899999999999887543
No 410
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.21 E-value=80 Score=29.14 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=23.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
.+|+|+++. +.|-+= ..|+++|+++||+|+.+.-
T Consensus 4 ~~~~vlVTG--atG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 4 TKGTILVTG--GAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SSCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CCcEEEEec--CCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 456776654 333332 5789999999999998864
No 411
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=20.13 E-value=1e+02 Score=27.03 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=22.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
||+++++..+. - ==..+|++|+++|++|+++.-
T Consensus 1 mk~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCAT-G--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 45556655433 2 235789999999999988754
No 412
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=20.13 E-value=1e+02 Score=28.30 Aligned_cols=35 Identities=14% Similarity=0.086 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
+++||+++. +.|-+ -..|+++|.++||+|+.+.-.
T Consensus 13 ~~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 13 MTRSALVTG--ITGQD--GAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp --CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEEC--CCChH--HHHHHHHHHHCCCeEEEEeCC
Confidence 567877764 34443 356889999999999988654
No 413
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=20.05 E-value=66 Score=26.46 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.+|+++..+..| +.+|..|+++|.+|+++...
T Consensus 2 ~~vvIIGgG~~G-----l~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSG-----LSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEECS
T ss_pred CeEEEECCCHHH-----HHHHHHHHHCCCcEEEEeCC
Confidence 467777666443 78899999999999999765
No 414
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=20.03 E-value=80 Score=30.08 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 011339 8 QQPHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTT 45 (488)
Q Consensus 8 ~~~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~ 45 (488)
++.+|+++..+--| +.+|..|+++|++|+++--
T Consensus 4 ~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 4 TTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 45789999876444 7889999999999999943
No 415
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=20.02 E-value=2.7e+02 Score=24.74 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 011339 10 PHFVLFPFLAQGHMIPMIDTARLLAQHGAAITIVTTP 46 (488)
Q Consensus 10 ~kvl~~~~~~~GHv~p~l~LA~~L~~rGH~Vt~~~~~ 46 (488)
.|+++++.++.| ==..+|++|+++|++|.++.-.
T Consensus 24 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 24 PQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp -CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777776543 2367899999999999877643
Done!