Your job contains 1 sequence.
>011341
MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV
EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL
CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT
SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC
YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF
GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA
DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK
EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV
TSMVGSRS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011341
(488 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088262 - symbol:RSH2 "RELA/SPOT homolog 2" sp... 2027 1.2e-209 1
TAIR|locus:2014335 - symbol:RSH3 "RELA/SPOT homolog 3" sp... 2024 2.4e-209 1
TIGR_CMR|BA_4637 - symbol:BA_4637 "GTP pyrophosphokinase"... 681 7.7e-70 2
UNIPROTKB|Q3A9Z8 - symbol:relA "GTP pyrophosphokinase" sp... 704 1.8e-69 1
TIGR_CMR|CHY_2223 - symbol:CHY_2223 "GTP pyrophosphokinas... 704 1.8e-69 1
TIGR_CMR|DET_0005 - symbol:DET_0005 "GTP pyrophosphokinas... 659 1.1e-64 1
TIGR_CMR|GSU_2236 - symbol:GSU_2236 "GTP pyrophosphokinas... 652 6.0e-64 1
UNIPROTKB|P0AG24 - symbol:spoT "guanosine 3'-diphosphate ... 628 2.1e-61 1
UNIPROTKB|P66014 - symbol:relA "Bifunctional (p)ppGpp syn... 621 1.2e-60 1
TIGR_CMR|CPS_4973 - symbol:CPS_4973 "guanosine-3,5-bis(di... 617 3.1e-60 1
TIGR_CMR|CBU_0303 - symbol:CBU_0303 "guanosine-3,5-bis(di... 616 3.9e-60 1
TIGR_CMR|SO_0359 - symbol:SO_0359 "guanosine-3,5-bis(diph... 612 1.0e-59 1
TIGR_CMR|SPO_3203 - symbol:SPO_3203 "guanosine-3',5'-bis(... 602 1.2e-58 1
UNIPROTKB|Q9KNM2 - symbol:spoT "Guanosine-3',5'-bis(dipho... 585 7.5e-57 1
TIGR_CMR|VC_2710 - symbol:VC_2710 "guanosine-3',5'-bis(di... 585 7.5e-57 1
TIGR_CMR|SO_3455 - symbol:SO_3455 "GTP pyrophosphokinase"... 555 1.1e-53 1
TIGR_CMR|CBU_1375 - symbol:CBU_1375 "GTP pyrophosphokinas... 533 1.3e-53 2
UNIPROTKB|Q9S3S3 - symbol:relA "PpGpp synthetase I" speci... 525 1.1e-52 2
TIGR_CMR|VC_2451 - symbol:VC_2451 "GTP pyrophosphokinase"... 525 1.1e-52 2
UNIPROTKB|P0AG20 - symbol:relA "GDP pyrophosphokinase / G... 534 1.9e-51 1
TIGR_CMR|CJE_1408 - symbol:CJE_1408 "RelA/SpoT family pro... 530 5.1e-51 1
TAIR|locus:2137869 - symbol:RSH1 "RELA/SPOT homolog 1" sp... 367 3.0e-50 2
UNIPROTKB|Q4K899 - symbol:relA "GTP diphosphokinase" spec... 517 1.7e-49 1
TIGR_CMR|CPS_4115 - symbol:CPS_4115 "GTP pyrophosphokinas... 498 2.3e-47 1
TAIR|locus:2090487 - symbol:CRSH "Ca2+-activated RelA/spo... 228 7.4e-16 1
ZFIN|ZDB-GENE-050417-377 - symbol:hddc3 "HD domain contai... 133 5.5e-08 1
UNIPROTKB|Q8N4P3 - symbol:HDDC3 "Guanosine-3',5'-bis(diph... 127 1.5e-06 1
UNIPROTKB|Q722A6 - symbol:LMOf2365_0828 "HD domain protei... 127 1.7e-06 1
UNIPROTKB|H0YNP9 - symbol:HDDC3 "Guanosine-3',5'-bis(diph... 118 2.3e-06 1
UNIPROTKB|Q722B6 - symbol:LMOf2365_0818 "Putative unchara... 130 4.0e-06 1
RGD|1311839 - symbol:Hddc3 "HD domain containing 3" speci... 124 5.1e-06 1
MGI|MGI:1915945 - symbol:Hddc3 "HD domain containing 3" s... 117 5.8e-05 1
UNIPROTKB|F1MR07 - symbol:HDDC3 "Uncharacterized protein"... 116 7.8e-05 1
UNIPROTKB|Q721J9 - symbol:LMOf2365_0987 "Putative unchara... 120 8.2e-05 1
FB|FBgn0039650 - symbol:Mesh1 "Metazoan SpoT homolog-1" s... 115 0.00011 1
UNIPROTKB|E2QTM0 - symbol:HDDC3 "Uncharacterized protein"... 115 0.00011 1
UNIPROTKB|F1RMH8 - symbol:HDDC3 "Uncharacterized protein"... 114 0.00015 1
UNIPROTKB|Q81LP1 - symbol:BAS4242 "Uncharacterized protei... 116 0.00022 1
TIGR_CMR|BA_4572 - symbol:BA_4572 "conserved hypothetical... 116 0.00022 1
UNIPROTKB|Q81TQ4 - symbol:BAS1119 "Uncharacterized protei... 113 0.00045 1
TIGR_CMR|BA_1212 - symbol:BA_1212 "conserved hypothetical... 113 0.00045 1
>TAIR|locus:2088262 [details] [associations]
symbol:RSH2 "RELA/SPOT homolog 2" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0015969 "guanosine tetraphosphate metabolic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008728 "GTP diphosphokinase activity" evidence=IGI]
[GO:0009611 "response to wounding" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0007165
"signal transduction" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009620 "response to fungus"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR003607 InterPro:IPR007685
Pfam:PF04607 SMART:SM00471 SMART:SM00954 GO:GO:0009737
GO:GO:0009507 EMBL:CP002686 GO:GO:0009611 GO:GO:0016301
EMBL:AB019229 eggNOG:COG0317 InterPro:IPR026020 PANTHER:PTHR21262
GO:GO:0008728 GO:GO:0015969 IPI:IPI00520491 RefSeq:NP_188021.1
UniGene:At.25183 ProteinModelPortal:Q9LVJ3 SMR:Q9LVJ3 STRING:Q9LVJ3
PaxDb:Q9LVJ3 PRIDE:Q9LVJ3 EnsemblPlants:AT3G14050.1 GeneID:820619
KEGG:ath:AT3G14050 TAIR:At3g14050 InParanoid:Q9LVJ3 OMA:CKYSSFV
PhylomeDB:Q9LVJ3 ProtClustDB:CLSN2684912 Genevestigator:Q9LVJ3
Uniprot:Q9LVJ3
Length = 709
Score = 2027 (718.6 bits), Expect = 1.2e-209, P = 1.2e-209
Identities = 390/480 (81%), Positives = 420/480 (87%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD+F+SYDYI R FGAGVADLV
Sbjct: 226 MRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTIDDSFMSYDYILRNFGAGVADLV 285
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM TL AL
Sbjct: 286 EGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMKTLYALSP 345
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P+QH E+S+ L + FDEAM+T
Sbjct: 346 VKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDSFDEAMIT 405
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIEKLEQALK IS+ VLCGRHKSLYSI+ KMLKKKLT+DEIHDI+GLRLIV+NE DC
Sbjct: 406 SAIEKLEQALKKAGISYHVLCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLRLIVDNEGDC 465
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH LW+EVPGK+KDYIT PKFNGYQSLHTVV G VPLEVQIRT+EMHLQAEF
Sbjct: 466 YKALGVVHSLWSEVPGKLKDYITHPKFNGYQSLHTVVMDNGTVPLEVQIRTQEMHLQAEF 525
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEG C++SSFVLQMVEWARWV+TW CEAMSKDRS + + DSIKPPC FPSH+
Sbjct: 526 GFAAHWRYKEGGCKYSSFVLQMVEWARWVVTWHCEAMSKDRSSISSSDSIKPPCKFPSHS 585
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCP SYKP S DGPV+VI+IENDKMSVQEFP SSTV DLL RAG GSSRWS YG P K
Sbjct: 586 EDCPASYKPNSSQDGPVYVIVIENDKMSVQEFPASSTVSDLLSRAGPGSSRWSMYGIPAK 645
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLN V D + KLKMGDVVELTP IPD+SLTEYREEIQRMY+RGLA S G V
Sbjct: 646 EELRPRLNQIPVSDLKWKLKMGDVVELTPTIPDESLTEYREEIQRMYDRGLAFSRPGTMV 705
>TAIR|locus:2014335 [details] [associations]
symbol:RSH3 "RELA/SPOT homolog 3" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0015969 "guanosine tetraphosphate metabolic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008728 "GTP diphosphokinase activity" evidence=IGI]
InterPro:IPR003607 InterPro:IPR006674 InterPro:IPR007685
Pfam:PF01966 Pfam:PF04607 SMART:SM00471 SMART:SM00954 EMBL:CP002684
GO:GO:0009507 GO:GO:0046872 EMBL:AC006577 GO:GO:0008081
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969
ProtClustDB:CLSN2684912 EMBL:AK227169 IPI:IPI00547761 PIR:D96582
RefSeq:NP_564652.2 UniGene:At.11116 ProteinModelPortal:Q9SYH1
SMR:Q9SYH1 STRING:Q9SYH1 EnsemblPlants:AT1G54130.1 GeneID:841853
KEGG:ath:AT1G54130 TAIR:At1g54130 HOGENOM:HOG000243166
InParanoid:Q9SYH1 OMA:QRMYERG PhylomeDB:Q9SYH1
Genevestigator:Q9SYH1 Uniprot:Q9SYH1
Length = 715
Score = 2024 (717.5 bits), Expect = 2.4e-209, P = 2.4e-209
Identities = 388/486 (79%), Positives = 430/486 (88%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLDD+F+SYDYI RTFG+GVADLV
Sbjct: 230 MRATGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDSFMSYDYILRTFGSGVADLV 289
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 120
EGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNMMTL ALP
Sbjct: 290 EGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLYALPP 349
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
KRQRFAKETLEIF PLANRLGIS+WKV+LENLCFKHL+PDQH E+S L + FDEAM+T
Sbjct: 350 VKRQRFAKETLEIFAPLANRLGISSWKVKLENLCFKHLHPDQHHEMSDMLEDSFDEAMIT 409
Query: 181 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 240
SAIEKLEQALK + IS+ V+ GRHKSLYSI+CKMLKKKLTMDEIHDI+GLRLIV+NE+DC
Sbjct: 410 SAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTMDEIHDIHGLRLIVDNEKDC 469
Query: 241 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 300
Y+AL VVH+LW+EVPGK+KDYI+ PKFNGYQSLHTVV G+G +PLEVQIRTKEMHLQAEF
Sbjct: 470 YKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPLEVQIRTKEMHLQAEF 529
Query: 301 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 360
GFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKD S + + + P C+FPSHA
Sbjct: 530 GFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDGSSICSSE---PLCSFPSHA 586
Query: 361 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 420
+DCPFSYKP + +GPV+VI+IEN+KM+VQEFP +STV DLL RAG GSSRWS Y P K
Sbjct: 587 EDCPFSYKPSGNQEGPVYVIVIENEKMTVQEFPENSTVSDLLRRAGPGSSRWSMYSIPAK 646
Query: 421 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 480
EELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQRMY+RGLA S A
Sbjct: 647 EELRPRLNQTPVSDLKCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGLAFSRPHRAA 706
Query: 481 T-SMVG 485
T +MVG
Sbjct: 707 TGTMVG 712
>TIGR_CMR|BA_4637 [details] [associations]
symbol:BA_4637 "GTP pyrophosphokinase" species:198094
"Bacillus anthracis str. Ames" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 InterPro:IPR026020
PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951 GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:NP_846854.1
ProteinModelPortal:Q81LI2 SMR:Q81LI2 DNASU:1085523
EnsemblBacteria:EBBACT00000012515 GeneID:1085523 KEGG:ban:BA_4637
PATRIC:18786856 ProtClustDB:CLSK887674 Uniprot:Q81LI2
Length = 727
Score = 681 (244.8 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 152/348 (43%), Positives = 211/348 (60%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY++H ++ A +L + + V+AG LHD ++D ++ + I R F +A LV+
Sbjct: 44 RKSGEPYIIHPIQVAGVLVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVD 103
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHNM TL LP
Sbjct: 104 GVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQ 157
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV-------EC 173
K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + + E
Sbjct: 158 EKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEY 217
Query: 174 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 233
DE M T EKL++ IS GR K +YSI+ KM + +EI+D+ +R++
Sbjct: 218 LDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVV 271
Query: 234 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 293
V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G PLEVQIRTKE
Sbjct: 272 VNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKE 331
Query: 294 MHLQAEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQCEAMSKD 340
MH AEFG AAHW YKEG ++ L+ + W R +L WQ EA + +
Sbjct: 332 MHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEASNAE 379
Score = 45 (20.9 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 26/90 (28%), Positives = 39/90 (43%)
Query: 358 SHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGF 417
S+A++ S K D VFV + D V E P S +D R +S G
Sbjct: 376 SNAEEFMESLKIDLFSD-MVFVFTPKGD---VMELPLGSVPIDFAYRV------YSEIG- 424
Query: 418 PLKEELRPRLNHKAVGDPRCKLKMGDVVEL 447
+ + ++N K V KLK GD++E+
Sbjct: 425 --NKTIGAKVNGKMV-TLDYKLKTGDIIEI 451
>UNIPROTKB|Q3A9Z8 [details] [associations]
symbol:relA "GTP pyrophosphokinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008728 "GTP
diphosphokinase activity" evidence=ISS] [GO:0015968 "stringent
response" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015968 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_361036.1
ProteinModelPortal:Q3A9Z8 SMR:Q3A9Z8 STRING:Q3A9Z8 GeneID:3727840
KEGG:chy:CHY_2223 PATRIC:21277513 OMA:SEKRIDR
BioCyc:CHYD246194:GJCN-2222-MONOMER Uniprot:Q3A9Z8
Length = 716
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 153/337 (45%), Positives = 208/337 (61%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+ Y+ H + A +LA + + +AAGLLHD ++D + + I R FG VA+LV+
Sbjct: 39 RASGEDYITHPLAVAFILAGLQMDDETIAAGLLHDVVEDTAYTIEDIAREFGEEVANLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ +E + + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 99 GVTKLSRIEFKNKEEQ------QVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHNP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETLEIF PLA+RLGI K +LE+L F++L+PD + ++ K+ + E
Sbjct: 153 EKQKEIARETLEIFAPLAHRLGIYRIKWELEDLAFRYLDPDNYYDIVEKIAKTRAKREQY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I LE+ LK NI + GR K LYSI KM +++ E++D+ +R+IVE+
Sbjct: 213 IQQVISILEEKLKSYNIKAKIE-GRPKHLYSIFQKMREQQKDFSEVYDVMAVRVIVESVR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H +W VPG+ KDYI PK N YQSLHT V G PLE+QIRT EMH A
Sbjct: 272 DCYTVLGIIHTMWIPVPGRFKDYIAMPKSNMYQSLHTTVIGPFGEPLEIQIRTFEMHRTA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEG F + + W R +L WQ E
Sbjct: 332 EYGIAAHWRYKEGGKGDKKFD-EKLSWLRQILEWQRE 367
>TIGR_CMR|CHY_2223 [details] [associations]
symbol:CHY_2223 "GTP pyrophosphokinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008728 "GTP
diphosphokinase activity" evidence=ISS] [GO:0015968 "stringent
response" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015968 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_361036.1
ProteinModelPortal:Q3A9Z8 SMR:Q3A9Z8 STRING:Q3A9Z8 GeneID:3727840
KEGG:chy:CHY_2223 PATRIC:21277513 OMA:SEKRIDR
BioCyc:CHYD246194:GJCN-2222-MONOMER Uniprot:Q3A9Z8
Length = 716
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 153/337 (45%), Positives = 208/337 (61%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
RASG+ Y+ H + A +LA + + +AAGLLHD ++D + + I R FG VA+LV+
Sbjct: 39 RASGEDYITHPLAVAFILAGLQMDDETIAAGLLHDVVEDTAYTIEDIAREFGEEVANLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KLS++ +E + + L MFLAMA D R +LIKLADRLHNM TL
Sbjct: 99 GVTKLSRIEFKNKEEQ------QVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHNP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAM 178
K++ A+ETLEIF PLA+RLGI K +LE+L F++L+PD + ++ K+ + E
Sbjct: 153 EKQKEIARETLEIFAPLAHRLGIYRIKWELEDLAFRYLDPDNYYDIVEKIAKTRAKREQY 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ I LE+ LK NI + GR K LYSI KM +++ E++D+ +R+IVE+
Sbjct: 213 IQQVISILEEKLKSYNIKAKIE-GRPKHLYSIFQKMREQQKDFSEVYDVMAVRVIVESVR 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY L ++H +W VPG+ KDYI PK N YQSLHT V G PLE+QIRT EMH A
Sbjct: 272 DCYTVLGIIHTMWIPVPGRFKDYIAMPKSNMYQSLHTTVIGPFGEPLEIQIRTFEMHRTA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
E+G AAHWRYKEG F + + W R +L WQ E
Sbjct: 332 EYGIAAHWRYKEGGKGDKKFD-EKLSWLRQILEWQRE 367
>TIGR_CMR|DET_0005 [details] [associations]
symbol:DET_0005 "GTP pyrophosphokinase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.10.20.30 InterPro:IPR012675 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_180760.1
ProteinModelPortal:Q3ZAI9 STRING:Q3ZAI9 GeneID:3229138
KEGG:det:DET0005 PATRIC:21607115 OMA:SGEPFIE ProtClustDB:CLSK836839
BioCyc:DETH243164:GJNF-5-MONOMER Uniprot:Q3ZAI9
Length = 728
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 151/344 (43%), Positives = 212/344 (61%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+P++ H + A+ LA + +S +AA LLHD +DA +S + I + FGA VA LV
Sbjct: 37 MRKSGEPFIEHPLNVAITLADLQLDSATLAAALLHDVPEDAHISLEQIEKKFGADVAKLV 96
Query: 61 EGVSKLSQLS-----KLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 114
+GV+KLS+L+ + AR + +A+ L M +AM+ D R V IKLADR HNM T
Sbjct: 97 DGVTKLSKLALGPGIEDARRPGGNASLRQAENLRKMLVAMSEDLRVVFIKLADRFHNMRT 156
Query: 115 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 174
L AL KR+ AKET+EI+ PLA+RLGI K QLE+L F++L+P + ++++ LV+
Sbjct: 157 LQALSAEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVAN-LVDS- 214
Query: 175 DEAMVTSAIEKLEQALK---DKNISFLVLCGRHKSLYSIHCKMLK---KKLTMDEIHDIY 228
A + IE + L+ +KN + L GR K LYSI+ KM K + ++I+D+
Sbjct: 215 KLAQRKNYIEHVSAILQSEFEKNGLKVELSGRPKHLYSIYQKMEKYASQGKQFEDIYDVL 274
Query: 229 GLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQ 288
LR++V + DCY A+ +VH LW +PG DYI PK NGYQSLHT V G PLEVQ
Sbjct: 275 ALRVLVNDIPDCYHAIGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSLGTTPLEVQ 334
Query: 289 IRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTW 332
+RT +MH AE+G AAHWRYK + +F + W R ++ W
Sbjct: 335 VRTYQMHHIAEYGVAAHWRYKTAGKEDVNFE-DRIGWLRQLIEW 377
>TIGR_CMR|GSU_2236 [details] [associations]
symbol:GSU_2236 "GTP pyrophosphokinase" species:243231
"Geobacter sulfurreducens PCA" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 GO:GO:0016787 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.10.20.30 InterPro:IPR012675 InterPro:IPR026020
PANTHER:PTHR21262 KO:K00951 GO:GO:0015969 TIGRFAMs:TIGR00691
HOGENOM:HOG000018299 OMA:RAYFYAE RefSeq:NP_953285.1
ProteinModelPortal:Q74AW3 SMR:Q74AW3 DNASU:2687525 GeneID:2687525
KEGG:gsu:GSU2236 PATRIC:22027327 ProtClustDB:CLSK924587
BioCyc:GSUL243231:GH27-2208-MONOMER Uniprot:Q74AW3
Length = 716
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 142/338 (42%), Positives = 207/338 (61%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PYL+H +E A +LA + + V GLLHDT++D + + + FGA VA+LV+
Sbjct: 39 RLSGEPYLVHPMEVAGVLADLKLDVPTVVTGLLHDTIEDTLTTREELEGMFGAEVANLVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+K+ ++ +E + +A+ M LAMA D R +L+KLADRLHNM TL P
Sbjct: 99 GVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPE 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 180
K++ ++ETL+I+ PLANRLGIS K +LE+L F++L P + +L+SK+ + E
Sbjct: 153 PKQRSISRETLDIYAPLANRLGISWIKSELEDLSFRYLEPQIYYDLASKVAKKKKER--E 210
Query: 181 SAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
S +E++ Q + K + + GR K LYSI KM + + +D+I+D+ +R++V +
Sbjct: 211 SYVEEVRQIIVSKLAEHDLKGDVFGRSKHLYSIWRKMQARNVDIDQIYDLVAIRVMVNDI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+CY+ L ++H W +PG+ KDYI PK N YQSLHT V G +EVQIRT +MH
Sbjct: 271 RECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGERMEVQIRTSDMHRV 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 335
AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 331 AEAGIAAHWKYKEGKGYDEKEVKRFA-WLRQLLEWQQE 367
>UNIPROTKB|P0AG24 [details] [associations]
symbol:spoT "guanosine 3'-diphosphate 5'-triphosphate
3'-diphosphatase [multifunctional]" species:83333 "Escherichia coli
K-12" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA] [GO:0015970
"guanosine tetraphosphate biosynthetic process" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0015969 "guanosine tetraphosphate metabolic
process" evidence=IEA;IMP] [GO:0008728 "GTP diphosphokinase
activity" evidence=IEA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IEA;IDA] [GO:0042594 "response to starvation"
evidence=IMP] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR006674 InterPro:IPR007685 Pfam:PF01966 Pfam:PF04607
SMART:SM00471 SMART:SM00954 UniPathway:UPA00908 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0016301 EMBL:L10328
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015949 GO:GO:0008081
GO:GO:0015970 eggNOG:COG0317 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728
TIGRFAMs:TIGR00691 EMBL:M24503 PIR:B30374 RefSeq:NP_418107.1
RefSeq:YP_491784.1 ProteinModelPortal:P0AG24 SMR:P0AG24
DIP:DIP-29378N IntAct:P0AG24 MINT:MINT-1219858 PRIDE:P0AG24
EnsemblBacteria:EBESCT00000003824 EnsemblBacteria:EBESCT00000015853
GeneID:12930367 GeneID:948159 KEGG:ecj:Y75_p3524 KEGG:eco:b3650
PATRIC:32122787 EchoBASE:EB0959 EcoGene:EG10966
HOGENOM:HOG000018299 OMA:RAYFYAE ProtClustDB:PRK11092
BioCyc:EcoCyc:SPOT-MONOMER BioCyc:ECOL316407:JW3625-MONOMER
BioCyc:MetaCyc:SPOT-MONOMER Genevestigator:P0AG24 Uniprot:P0AG24
Length = 702
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 144/340 (42%), Positives = 202/340 (59%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY+ H V A +LA + + + A LLHD ++D +Y + + FG VA+LVE
Sbjct: 39 RSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVE 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +L R+ K +A+ M +AM D R +LIKLADR HNM TL +L
Sbjct: 99 GVSKLDKLK--FRDK----KEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ + K + M
Sbjct: 153 DKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEM 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + ++E L++ I V GR K LYSI+CKM+ K+ I DIY R+IV + +
Sbjct: 213 IQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSD 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY+ L +H L+ PG++KDYI PK NGYQSLHT + G VP+EVQIRT++M A
Sbjct: 272 TCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
E G AAHW YKE ++ ++ W + +L Q A S
Sbjct: 332 EMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGS 371
>UNIPROTKB|P66014 [details] [associations]
symbol:relA "Bifunctional (p)ppGpp synthase/hydrolase relA"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008728 "GTP diphosphokinase activity" evidence=IDA]
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0015968 "stringent response" evidence=IMP] [GO:0030145
"manganese ion binding" evidence=IDA] InterPro:IPR003607
InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607 SMART:SM00471
SMART:SM00954 UniPathway:UPA00908 GO:GO:0005525 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 GO:GO:0009405 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842580
GO:GO:0016301 GO:GO:0030145 Gene3D:3.10.20.30 InterPro:IPR012675
GO:GO:0015968 GO:GO:0015970 eggNOG:COG0317 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 KO:K00951 GO:GO:0008728
TIGRFAMs:TIGR00691 PIR:F70725 RefSeq:NP_217099.1 RefSeq:NP_337159.1
RefSeq:YP_006516024.1 ProteinModelPortal:P66014 SMR:P66014
DNASU:925657 EnsemblBacteria:EBMYCT00000003206
EnsemblBacteria:EBMYCT00000071175 GeneID:13319303 GeneID:887888
GeneID:925657 KEGG:mtc:MT2660 KEGG:mtu:Rv2583c KEGG:mtv:RVBD_2583c
PATRIC:18127594 TubercuList:Rv2583c HOGENOM:HOG000018301
ProtClustDB:CLSK791939 Uniprot:P66014
Length = 738
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 139/346 (40%), Positives = 204/346 (58%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + + FG V LV
Sbjct: 46 LRQSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYTLEALTEEFGEEVGHLV 105
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
+GV+KL ++ E + + M AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 106 DGVTKLDRV--------VLGSAAEGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLP 157
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC---FDE 176
K+ R A+ETLE+ PLA+RLG+++ K +LE+L F L+P ++ E+ +LV +
Sbjct: 158 PEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAILHPKKYEEIV-RLVAGRAPSRD 216
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 236
+ ++ L I V GR K +SI+ KM+ K D+IHD+ G+R++ +
Sbjct: 217 TYLAKVRAEIVNTLTASKIKATVE-GRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDE 275
Query: 237 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH
Sbjct: 276 IRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHR 335
Query: 297 QAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 336
AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 336 TAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQREA 381
>TIGR_CMR|CPS_4973 [details] [associations]
symbol:CPS_4973 "guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase" species:167879 "Colwellia psychrerythraea
34H" [GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.10.20.30
InterPro:IPR012675 eggNOG:COG0317 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0015969
TIGRFAMs:TIGR00691 HOGENOM:HOG000018299 OMA:RAYFYAE
RefSeq:YP_271612.1 ProteinModelPortal:Q47UB1 STRING:Q47UB1
DNASU:3519239 GeneID:3519239 KEGG:cps:CPS_4973 PATRIC:21472739
ProtClustDB:CLSK742426 BioCyc:CPSY167879:GI48-4974-MONOMER
Uniprot:Q47UB1
Length = 703
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 145/343 (42%), Positives = 208/343 (60%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR+SGDPY+ H V A+ LA + + + A LLHD ++D ++ D + FG VA+LV
Sbjct: 38 MRSSGDPYITHPVAVAINLAQMNLDHETLMAALLHDVIEDTEVTKDELAELFGHTVAELV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGVSKL +L + NN + ++A+ M LAM D R +LIKLADR HNM TL +L
Sbjct: 98 EGVSKLDKL----KFNN--KEEMQAENFRKMVLAMVQDIRVILIKLADRTHNMRTLGSLR 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 177
KR+R A+ETLEI+ P+ANRLGI K +LE L F+ L P + L S + +A
Sbjct: 152 PDKRRRIARETLEIYAPIANRLGIHDIKNELELLGFEALYPMRSRALKSAVQSARGNRKA 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ + +++ L + I ++ GR K LYSI+ KML K+L +E+ DIY R+IV ++
Sbjct: 212 IIDNIEKEIAARLAESGIDAQII-GREKHLYSIYRKMLNKELMFNEVMDIYAFRVIVHDK 270
Query: 238 ED-CYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 296
D CY+AL +H L+ + + KDYI PK NGYQSLHT + G +P+E+QIRT +M
Sbjct: 271 IDNCYRALGAMHNLFKPIETRFKDYIAIPKTNGYQSLHTSLIGPHGIPVEIQIRTHDMDQ 330
Query: 297 QAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQCEAMS 338
A+ G AAHW YK+ GD ++ ++ W + +L Q A S
Sbjct: 331 MADKGVAAHWLYKQDGDNTGTTAQMKARRWMQSLLELQQSAGS 373
>TIGR_CMR|CBU_0303 [details] [associations]
symbol:CBU_0303 "guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase" species:227377 "Coxiella burnetii RSA 493"
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=ISS] [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.10.20.30 InterPro:IPR012675 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969
TIGRFAMs:TIGR00691 HOGENOM:HOG000018299 OMA:RAYFYAE
RefSeq:NP_819346.1 ProteinModelPortal:Q820X2 GeneID:1208185
KEGG:cbu:CBU_0303 PATRIC:17929301 ProtClustDB:CLSK913970
BioCyc:CBUR227377:GJ7S-310-MONOMER Uniprot:Q820X2
Length = 707
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 140/338 (41%), Positives = 196/338 (57%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R +G+PY+ H V A +LA + + + A LLHD ++D + I FG VA+LV+
Sbjct: 38 RRTGEPYINHPVAVAGILADLKMDYQTIMAALLHDVIEDTPVEKKAIAEKFGEEVAELVD 97
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL+Q+ ++R +A+ M LAMA D R +++KLADRLHNM TL +L
Sbjct: 98 GVSKLTQIEFVSRAE------AQAESFRKMVLAMARDIRVIIVKLADRLHNMRTLGSLHS 151
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF-DEAMV 179
KR+R A+ETL+IF P+ RLG+ V+LE L F L P +H L + + +
Sbjct: 152 QKRRRIARETLDIFAPIGKRLGMRELSVELEELGFAALYPLRHRALKDAVRRTRGNRKKI 211
Query: 180 TSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ IEK L L +S + GR K LYSI+ KM K + +EI D+Y R+IVE+ +
Sbjct: 212 LALIEKTLHVGLNQSRLSSYTITGREKHLYSIYRKMRNKHIPFNEIMDVYAFRVIVEDVD 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY+AL ++H L+ VP + KDYI PK NGYQSLHT + G +P+EVQIRT EM A
Sbjct: 272 SCYRALGIIHGLFKPVPERFKDYIAIPKANGYQSLHTTLFGPYGLPVEVQIRTTEMDRMA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 336
G AAHW YK D + ++ W + +L Q +A
Sbjct: 332 TKGIAAHWLYKTTDAPMTESQVRAKAWVKNLLELQEDA 369
>TIGR_CMR|SO_0359 [details] [associations]
symbol:SO_0359 "guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase" species:211586 "Shewanella oneidensis MR-1"
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=ISS] [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.10.20.30 InterPro:IPR012675 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969
TIGRFAMs:TIGR00691 HOGENOM:HOG000018299 OMA:RAYFYAE
ProtClustDB:PRK11092 RefSeq:NP_715999.1 ProteinModelPortal:Q8EJU8
GeneID:1168236 KEGG:son:SO_0359 PATRIC:23520423 Uniprot:Q8EJU8
Length = 701
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 140/332 (42%), Positives = 194/332 (58%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
MR SG+PY+ H V A +LA + + + A LLHDT++D +++ + + FG VA+LV
Sbjct: 38 MRTSGEPYITHPVAVARILAEMRLDHETLMAALLHDTIEDTYVTKEDLAERFGESVAELV 97
Query: 61 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 119
EGVSKL +L R+ K +A+ M +AM D R +LIKLADR HNM TL AL
Sbjct: 98 EGVSKLDKLK--FRDK----KEAQAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALR 151
Query: 120 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEA 177
KR+R A+ETLEI+ P+ANRLGI K +LE+L F+ P ++ L K +
Sbjct: 152 PDKRRRIARETLEIYAPIANRLGIHNIKTELEDLGFQAYYPMRYRVLKEVVKAARGNRKE 211
Query: 178 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 237
++ + L D I V GR K+LYSI+ KM K+L E+ DIY R+IV++
Sbjct: 212 LIQGIEAAVLTRLNDAGIKGKVK-GREKNLYSIYNKMQSKELQFQEVMDIYAFRVIVDSI 270
Query: 238 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 297
+ CY+ L +H L+ PG+ KDYI PK NGYQSLHT + G VP+E+QIRT++M
Sbjct: 271 DTCYRVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVPVEIQIRTEDMDQM 330
Query: 298 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWV 329
A+ G AAHW YK G + V +W+
Sbjct: 331 ADKGVAAHWAYK-GGAETGQGTTTQVRARKWM 361
>TIGR_CMR|SPO_3203 [details] [associations]
symbol:SPO_3203 "guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase, putative" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0008893 "guanosine-3',5'-bis(diphosphate)
3'-diphosphatase activity" evidence=ISS] [GO:0015968 "stringent
response" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016787
Gene3D:3.10.20.30 InterPro:IPR012675 KO:K01139 InterPro:IPR026020
PANTHER:PTHR21262 GO:GO:0015969 TIGRFAMs:TIGR00691
HOGENOM:HOG000018299 OMA:RAYFYAE RefSeq:YP_168406.1
ProteinModelPortal:Q5LNK1 GeneID:3193258 KEGG:sil:SPO3203
PATRIC:23379853 ProtClustDB:CLSK934090 Uniprot:Q5LNK1
Length = 730
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 130/327 (39%), Positives = 188/327 (57%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY H V A +L + + LLHDT++D SY + FG VA LV+
Sbjct: 59 RHSGEPYFTHPVAVAAILTEQRLDDATIITALLHDTIEDTKASYGQVSELFGEEVAMLVD 118
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GV+KL+ L +RE T +A+ +F+AM+ D R +L+KLADRLHNM T+ A+
Sbjct: 119 GVTKLTNLQLSSRE------TKQAENFRKLFMAMSKDLRVILVKLADRLHNMRTIKAMRP 172
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA--M 178
K+ A+ET++I+ PLA R+G+ + +LE+L F+ LNP+ + + + E +
Sbjct: 173 EKQAVKARETMDIYAPLAGRMGMQWMREELEDLAFRVLNPEGRQSIIRRFITLQRETGDV 232
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ + L I V GR K YSI KM +K + DIYG R+I +EE
Sbjct: 233 IHRITGDMRHELDKAGIEAEVF-GRAKKPYSIWRKMQEKDQGFSRLSDIYGFRIITLSEE 291
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
DCY+ L +HQ W VPG+ KDYI++PK NGY+S+HT V+G +EVQIRT++MH A
Sbjct: 292 DCYRTLGAIHQRWRAVPGRFKDYISQPKSNGYRSIHTTVSGRDGKRVEVQIRTRQMHDVA 351
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEW 325
E G AAHW Y++G + F + +W
Sbjct: 352 ETGVAAHWSYRDGVRTQNPFAVDPAKW 378
>UNIPROTKB|Q9KNM2 [details] [associations]
symbol:spoT "Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase" species:243277 "Vibrio cholerae O1 biovar
El Tor str. N16961" [GO:0009267 "cellular response to starvation"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
UniPathway:UPA00908 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0009267 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0015970 HSSP:Q54089 eggNOG:COG0317
KO:K01139 GO:GO:0008893 InterPro:IPR026020 PANTHER:PTHR21262
TIGRFAMs:TIGR00691 OMA:RAYFYAE ProtClustDB:PRK11092 PIR:B82044
RefSeq:NP_232337.1 ProteinModelPortal:Q9KNM2 DNASU:2615538
GeneID:2615538 KEGG:vch:VC2710 PATRIC:20084438 Uniprot:Q9KNM2
Length = 705
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 136/331 (41%), Positives = 196/331 (59%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY++H V A +LA + + + A LLHD ++D ++ + + FG+ VA+LV+
Sbjct: 39 RSSGEPYIIHPVAVARILAEMRLDLETLQAALLHDVIEDCDVTKEDLDAHFGSSVAELVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +L R K +A+ M LAM D R +LIKLADR NM TL AL
Sbjct: 99 GVSKLDKLKFRDR------KEAQAENFRKMVLAMVQDIRVILIKLADRTPNMRTLGALRP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ L K + M
Sbjct: 153 DKKRRIARETLEIYAPLAHRLGIHNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEM 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++E L++ + V+ GR K+L+SI+ KM K+ I DIY R++V+ +
Sbjct: 213 IQRIHSEIEGRLQEVGLPARVV-GREKNLFSIYNKMKTKEQRFHTIMDIYAFRIVVDTAD 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY+ L VH L+ P +MKDYI PK NGYQSLHT + G VP+EVQIRT++M A
Sbjct: 272 TCYRVLGQVHSLYKPRPARMKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMDQMA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWV 329
+ G AAHW YK + + Q ++ RW+
Sbjct: 332 DKGVAAHWSYK-ANSERGGTTAQ-IKAQRWM 360
>TIGR_CMR|VC_2710 [details] [associations]
symbol:VC_2710 "guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase" species:686 "Vibrio cholerae O1 biovar El
Tor" [GO:0009267 "cellular response to starvation" evidence=ISS]
InterPro:IPR003607 InterPro:IPR004811 InterPro:IPR007685
Pfam:PF04607 SMART:SM00471 SMART:SM00954 UniPathway:UPA00908
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009267
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015970 HSSP:Q54089
eggNOG:COG0317 KO:K01139 GO:GO:0008893 InterPro:IPR026020
PANTHER:PTHR21262 TIGRFAMs:TIGR00691 OMA:RAYFYAE
ProtClustDB:PRK11092 PIR:B82044 RefSeq:NP_232337.1
ProteinModelPortal:Q9KNM2 DNASU:2615538 GeneID:2615538
KEGG:vch:VC2710 PATRIC:20084438 Uniprot:Q9KNM2
Length = 705
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 136/331 (41%), Positives = 196/331 (59%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R+SG+PY++H V A +LA + + + A LLHD ++D ++ + + FG+ VA+LV+
Sbjct: 39 RSSGEPYIIHPVAVARILAEMRLDLETLQAALLHDVIEDCDVTKEDLDAHFGSSVAELVD 98
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 120
GVSKL +L R K +A+ M LAM D R +LIKLADR NM TL AL
Sbjct: 99 GVSKLDKLKFRDR------KEAQAENFRKMVLAMVQDIRVILIKLADRTPNMRTLGALRP 152
Query: 121 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAM 178
K++R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ L K + M
Sbjct: 153 DKKRRIARETLEIYAPLAHRLGIHNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEM 212
Query: 179 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 238
+ ++E L++ + V+ GR K+L+SI+ KM K+ I DIY R++V+ +
Sbjct: 213 IQRIHSEIEGRLQEVGLPARVV-GREKNLFSIYNKMKTKEQRFHTIMDIYAFRIVVDTAD 271
Query: 239 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 298
CY+ L VH L+ P +MKDYI PK NGYQSLHT + G VP+EVQIRT++M A
Sbjct: 272 TCYRVLGQVHSLYKPRPARMKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMDQMA 331
Query: 299 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWV 329
+ G AAHW YK + + Q ++ RW+
Sbjct: 332 DKGVAAHWSYK-ANSERGGTTAQ-IKAQRWM 360
>TIGR_CMR|SO_3455 [details] [associations]
symbol:SO_3455 "GTP pyrophosphokinase" species:211586
"Shewanella oneidensis MR-1" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR004811 InterPro:IPR007685
Pfam:PF04607 SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0000166 GO:GO:0016301
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.10.20.30
InterPro:IPR012675 InterPro:IPR026020 PANTHER:PTHR21262
HOGENOM:HOG000018300 KO:K00951 OMA:HRADCDQ GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:NP_719004.1
ProteinModelPortal:Q8EBQ4 GeneID:1171131 KEGG:son:SO_3455
PATRIC:23526606 ProtClustDB:CLSK907176 Uniprot:Q8EBQ4
Length = 735
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 130/332 (39%), Positives = 190/332 (57%)
Query: 9 LLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQ 68
L H E +LA + + + A +L D L+ + I FG +A LV V ++
Sbjct: 55 LEHAREMIEILAPLNMDIETLQAAILFVVFDAGLLNEEAIKEKFGEPLARLVASVVTMNA 114
Query: 69 LSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFA 127
+ L N+ S + D + M LAM D RAV+IKLA+R+ + + R A
Sbjct: 115 IGALKINPNSRSTEPQIDNIRRMLLAMVEDVRAVVIKLAERVCLLRAVKNADEETRVLLA 174
Query: 128 KETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV-ECFD-EAMVTSAIEK 185
+E +I+ PLANRLGI K +LE++ F++L+PD + E++ +L + D E + + +E+
Sbjct: 175 REIADIYAPLANRLGIGQLKWELEDISFRYLHPDTYKEIAKQLDGKRLDREVFIENFVEQ 234
Query: 186 LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALR 245
L+Q L + +I V GR K +YSI KM K L DE+ D+ +R++ E +DCY AL
Sbjct: 235 LQQRLDEDHIRAKVY-GRPKHIYSIWRKMKGKHLKFDELFDVRAVRIVTERLQDCYGALG 293
Query: 246 VVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAA 304
VVH LW +P + DY+ PK NGYQS+HTVV G EG +E+QIRT++MH AE G AA
Sbjct: 294 VVHTLWHHIPREFDDYVANPKPNGYQSIHTVVVGPEGKT-VEIQIRTQDMHEDAELGVAA 352
Query: 305 HWRYKEGDCQHS---SFVLQMVEWARWVLTWQ 333
HW+YKEG+ HS S + + W R +L WQ
Sbjct: 353 HWKYKEGN--HSGKQSGYEEKINWLRKILQWQ 382
>TIGR_CMR|CBU_1375 [details] [associations]
symbol:CBU_1375 "GTP pyrophosphokinase" species:227377
"Coxiella burnetii RSA 493" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0000166 GO:GO:0016301 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:3.10.20.30 InterPro:IPR012675
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
OMA:HRADCDQ GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691
RefSeq:NP_820364.1 ProteinModelPortal:Q83BW2 PRIDE:Q83BW2
GeneID:1209281 KEGG:cbu:CBU_1375 PATRIC:17931493
ProtClustDB:CLSK914739 BioCyc:CBUR227377:GJ7S-1363-MONOMER
Uniprot:Q83BW2
Length = 714
Score = 533 (192.7 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 119/329 (36%), Positives = 189/329 (57%)
Query: 16 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSK-LAR 74
A LL + +S +AA LL+ T+ + +S + + G VA L+ G ++ + L R
Sbjct: 51 ASLLQPLHCDSETLAAALLYPTVTQSGISQEALTDQIGKSVAKLLMGTKRMETIDDMLIR 110
Query: 75 ENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 133
+ + + D L M LAM D R VLIKL++RL + P+ +++ A++ +++
Sbjct: 111 SSGFSQQQNFVDNLRKMLLAMVDDVRIVLIKLSERLTTLRYSRHQPISEQKDIAQKIMDL 170
Query: 134 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EAMVTSAIEKLEQALK 191
+ PLANRLG+ +K Q+E+ F++LNP++++ +S L + + E + IE LE
Sbjct: 171 YAPLANRLGVGQFKWQMEDWAFRYLNPNEYSLISKSLNMRRVEREKYIEKLIEYLEGIFH 230
Query: 192 DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 251
+I + GR K +YSI K+ +K++ EI+D +R++V + EDCY AL +VH LW
Sbjct: 231 GSDIEKYNISGRAKHIYSIFRKIQRKQVDFSEIYDTSAVRILVSSLEDCYTALSIVHALW 290
Query: 252 AEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 311
+ + DYI +PK NGY+S+HT V G +E+QIRT MH +AE G AAHW+YKEG
Sbjct: 291 EPIAKEFDDYIAKPKDNGYRSIHTAVIGPEGHNIEIQIRTYGMHEEAELGVAAHWKYKEG 350
Query: 312 DCQHSSFVLQMVEWARWVLTWQCEAMSKD 340
S + + + W R V+ WQ E +S D
Sbjct: 351 KKVASDYE-EKINWLREVMDWQKE-VSPD 377
Score = 39 (18.8 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 19/72 (26%), Positives = 30/72 (41%)
Query: 381 MIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK 440
+++ND + S+V DLL G G G + + RL +GD + L+
Sbjct: 501 LLKNDLNQIYSAFNFSSVTDLLAAIGSGD-----IGI---QTILNRLRALKIGDEKTPLE 552
Query: 441 MGDVVELTPAIP 452
V E+ A P
Sbjct: 553 -SPVREVASASP 563
>UNIPROTKB|Q9S3S3 [details] [associations]
symbol:relA "PpGpp synthetase I" species:666 "Vibrio
cholerae" [GO:0009267 "cellular response to starvation"
evidence=ISS] InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0000166 GenomeReviews:AE003852_GR
GO:GO:0009267 Gene3D:3.10.20.30 InterPro:IPR012675
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0015969
TIGRFAMs:TIGR00691 EMBL:AF175295 PIR:H82074
ProteinModelPortal:Q9S3S3 DNASU:2612993 PATRIC:20083923
ProtClustDB:CLSK874804 Uniprot:Q9S3S3
Length = 738
Score = 525 (189.9 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 118/329 (35%), Positives = 180/329 (54%)
Query: 14 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 73
E +L + + + A LL L + + +G V L+ GV +++ + +L
Sbjct: 60 EMIEILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLN 119
Query: 74 RENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLE 132
+ + + + D + M LAM D R V+IKLA+R+ N+ + P R+ AKE
Sbjct: 120 VTMHGSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDEVRRVAAKECAN 179
Query: 133 IFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQAL 190
I+ PLANRLGI K ++E+ F++ PD + +++ +L E E + + L +
Sbjct: 180 IYAPLANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEM 239
Query: 191 KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQL 250
K I+ V GR K +YSI KM KK L DE+ D+ +R+I + +DCY AL +VH
Sbjct: 240 KQSGINAEV-SGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTK 298
Query: 251 WAEVPGKMKDYITRPKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYK 309
+ +P + DY+ PK NGYQS+HTV+ G EG +E+QIRTK+MH ++E G AAHW+YK
Sbjct: 299 YKHLPNEFDDYVANPKPNGYQSIHTVILGPEGKT-IEIQIRTKQMHEESELGVAAHWKYK 357
Query: 310 EGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
EG S + + W R +L WQ E MS
Sbjct: 358 EGSSAARSGYDEKITWLRKLLDWQ-EEMS 385
Score = 38 (18.4 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 438 KLKMGDVVELTPA 450
KL+MGD VE+ A
Sbjct: 451 KLQMGDQVEIITA 463
>TIGR_CMR|VC_2451 [details] [associations]
symbol:VC_2451 "GTP pyrophosphokinase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR004811 InterPro:IPR007685
Pfam:PF04607 SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0000166
GenomeReviews:AE003852_GR GO:GO:0009267 Gene3D:3.10.20.30
InterPro:IPR012675 InterPro:IPR026020 PANTHER:PTHR21262
GO:GO:0015969 TIGRFAMs:TIGR00691 EMBL:AF175295 PIR:H82074
ProteinModelPortal:Q9S3S3 DNASU:2612993 PATRIC:20083923
ProtClustDB:CLSK874804 Uniprot:Q9S3S3
Length = 738
Score = 525 (189.9 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 118/329 (35%), Positives = 180/329 (54%)
Query: 14 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 73
E +L + + + A LL L + + +G V L+ GV +++ + +L
Sbjct: 60 EMIEILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLN 119
Query: 74 RENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLE 132
+ + + + D + M LAM D R V+IKLA+R+ N+ + P R+ AKE
Sbjct: 120 VTMHGSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDEVRRVAAKECAN 179
Query: 133 IFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQAL 190
I+ PLANRLGI K ++E+ F++ PD + +++ +L E E + + L +
Sbjct: 180 IYAPLANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEM 239
Query: 191 KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQL 250
K I+ V GR K +YSI KM KK L DE+ D+ +R+I + +DCY AL +VH
Sbjct: 240 KQSGINAEV-SGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTK 298
Query: 251 WAEVPGKMKDYITRPKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYK 309
+ +P + DY+ PK NGYQS+HTV+ G EG +E+QIRTK+MH ++E G AAHW+YK
Sbjct: 299 YKHLPNEFDDYVANPKPNGYQSIHTVILGPEGKT-IEIQIRTKQMHEESELGVAAHWKYK 357
Query: 310 EGDCQHSSFVLQMVEWARWVLTWQCEAMS 338
EG S + + W R +L WQ E MS
Sbjct: 358 EGSSAARSGYDEKITWLRKLLDWQ-EEMS 385
Score = 38 (18.4 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 438 KLKMGDVVELTPA 450
KL+MGD VE+ A
Sbjct: 451 KLQMGDQVEIITA 463
>UNIPROTKB|P0AG20 [details] [associations]
symbol:relA "GDP pyrophosphokinase / GTP pyrophosphokinase"
species:83333 "Escherichia coli K-12" [GO:0016597 "amino acid
binding" evidence=IEA] [GO:0015970 "guanosine tetraphosphate
biosynthetic process" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0015969 "guanosine tetraphosphate metabolic process"
evidence=IEA;IMP] [GO:0008728 "GTP diphosphokinase activity"
evidence=IEA;IDA] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IPI] InterPro:IPR002912 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF01842 Pfam:PF04607 SMART:SM00954
UniPathway:UPA00908 GO:GO:0005525 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016597 GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015949 EMBL:U29580
GO:GO:0015970 EMBL:J04039 eggNOG:COG0317 InterPro:IPR026020
PANTHER:PTHR21262 PIR:D65060 RefSeq:NP_417264.1 RefSeq:YP_490992.1
ProteinModelPortal:P0AG20 SMR:P0AG20 IntAct:P0AG20 PRIDE:P0AG20
EnsemblBacteria:EBESCT00000002092 EnsemblBacteria:EBESCT00000002093
EnsemblBacteria:EBESCT00000014610 GeneID:12930232 GeneID:947244
KEGG:ecj:Y75_p2721 KEGG:eco:b2784 PATRIC:32120984 EchoBASE:EB0828
EcoGene:EG10835 HOGENOM:HOG000018300 KO:K00951 OMA:HRADCDQ
ProtClustDB:PRK10872 BioCyc:EcoCyc:RELA-MONOMER
BioCyc:ECOL316407:JW2755-MONOMER BioCyc:MetaCyc:RELA-MONOMER
ChEMBL:CHEMBL1163114 Genevestigator:P0AG20 GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 Uniprot:P0AG20
Length = 744
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 120/328 (36%), Positives = 181/328 (55%)
Query: 13 VETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKL 72
VE +L+ + + + A LL D +S D + + G V +L+ GV ++ + +L
Sbjct: 60 VEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQL 119
Query: 73 ARENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFAKETL 131
+ + + + D + M LAM D R V+IKLA+R+ ++ + P +R AKE
Sbjct: 120 KATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECT 179
Query: 132 EIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC-FD-EAMVTSAIEKLEQA 189
I+ PLANRLGI K +LE+ CF++L+P ++ ++ L E D E + + L
Sbjct: 180 NIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAE 239
Query: 190 LKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQ 249
+K + + V GR K +YSI KM KK L DE+ D+ +R++ E +DCY AL +VH
Sbjct: 240 MKAEGVKAEVY-GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHT 298
Query: 250 LWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYK 309
+ +P + DY+ PK NGYQS+HTVV G G +E+QIRTK+MH AE G AAHW+YK
Sbjct: 299 HYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYK 358
Query: 310 EGDCQHS--SFVLQMVEWARWVLTWQCE 335
EG S + W R ++ WQ E
Sbjct: 359 EGAAAGGARSGHEDRIAWLRKLIAWQEE 386
>TIGR_CMR|CJE_1408 [details] [associations]
symbol:CJE_1408 "RelA/SpoT family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0015968 "stringent response" evidence=ISS]
InterPro:IPR002912 InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF01842 Pfam:PF04607 SMART:SM00471
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0003824 GO:GO:0016597 EMBL:CP000025
GenomeReviews:CP000025_GR Gene3D:3.10.20.30 InterPro:IPR012675
eggNOG:COG0317 KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GO:GO:0015969 TIGRFAMs:TIGR00691 HOGENOM:HOG000018299
RefSeq:YP_179394.1 ProteinModelPortal:Q5HTJ1 STRING:Q5HTJ1
GeneID:3231914 KEGG:cjr:CJE1408 PATRIC:20044618 OMA:TIHTTIF
ProtClustDB:CLSK872444 BioCyc:CJEJ195099:GJC0-1435-MONOMER
Uniprot:Q5HTJ1
Length = 731
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 123/333 (36%), Positives = 192/333 (57%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
R SG+PY +H + A L+ + N + + A LLHD ++D + + + FG+ V LV
Sbjct: 56 RKSGEPYAVHPILVATLVGFLSENKSNILAALLHDVIEDTNCTKEELREQFGSEVLKLVL 115
Query: 62 GVSKLSQLSK--LARENNTASKTVEADRLHTMFLA-MADARAVLIKLADRLHNMMTLDAL 118
G++K+ ++ + L + S T A M LA + D +++KL DRLHNM+TLD L
Sbjct: 116 GLTKIIEIREDNLISSKSKKSLTKSALTFRNMLLASIEDVGVLIVKLCDRLHNMLTLDIL 175
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAM 178
K++R ++ETL ++ P+A+RLGIS+ K LE+L FK+L PD++ +L + ++ M
Sbjct: 176 REDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPDEY-KLIDNYINSNNQEM 234
Query: 179 ---VTSAIEKLEQALKDKNI---SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 232
+ I K+E SF + R K YSI+ KM +K + ++E+ D+ G+R+
Sbjct: 235 QLGLNEFISKIELLFLSNGFRQGSFEIQ-KRIKHSYSIYLKMQRKGIGIEEVLDLLGVRI 293
Query: 233 IVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTK 292
+VE DCY AL ++H + + + KDYI PK NGYQ++HT + + +E QIRT
Sbjct: 294 LVEKVSDCYLALGILHTHFNPLVSRFKDYIALPKQNGYQTIHTTLFDAKSI-IEAQIRTF 352
Query: 293 EMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEW 325
+MH AEFG AAHW+YKE S V ++W
Sbjct: 353 DMHKIAEFGIAAHWKYKED----GSVVAPRLDW 381
>TAIR|locus:2137869 [details] [associations]
symbol:RSH1 "RELA/SPOT homolog 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA] [GO:0015969
"guanosine tetraphosphate metabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009611 "response to wounding"
evidence=IEP] InterPro:IPR003607 InterPro:IPR007685 Pfam:PF04607
SMART:SM00471 SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0009507 EMBL:CP002687
GO:GO:0003824 GO:GO:0009611 Gene3D:3.10.20.30 InterPro:IPR012675
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0015969 IPI:IPI00527107
RefSeq:NP_849287.2 UniGene:At.3876 UniGene:At.73164
ProteinModelPortal:F4JHA2 SMR:F4JHA2 PRIDE:F4JHA2
EnsemblPlants:AT4G02260.1 GeneID:828096 KEGG:ath:AT4G02260
OMA:RQMFLAM Uniprot:F4JHA2
Length = 884
Score = 367 (134.2 bits), Expect = 3.0e-50, Sum P(2) = 3.0e-50
Identities = 89/245 (36%), Positives = 144/245 (58%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYDYIFRTFGAGVADLV 60
R SG+P+++H V A +L + + + AGLLHDT++D F++++ I FGA V +V
Sbjct: 166 RRSGEPFIIHPVAVARILGELELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIV 225
Query: 61 EGVSKLSQLSKL-ARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDAL 118
EG +K+S+L KL + + + V+AD L MFLAM D R +++KLADRLHNM TL +
Sbjct: 226 EGETKVSKLGKLKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHM 285
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE-- 176
P K+ A ETL++F PLA LG+ + K +LENL F +++ + + ++S++ + E
Sbjct: 286 PPHKQSSIAGETLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHE 345
Query: 177 AMVTSAIEKLEQALKDKNISFLVLCGRH-----KSLYSIHCKMLKKKLTMDEIHDI-YGL 230
+T A L + ++D LV K YSI+ LK K ++++ + I L
Sbjct: 346 KELTEANRILVKKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQQL 405
Query: 231 RLIVE 235
R++V+
Sbjct: 406 RIVVK 410
Score = 193 (73.0 bits), Expect = 3.0e-50, Sum P(2) = 3.0e-50
Identities = 49/121 (40%), Positives = 69/121 (57%)
Query: 205 KSLYSIHCKMLKKKLTMDEIHDI-YGLRLIVEN------------EEDCYQALRVVHQLW 251
K YSI+ LK K ++++ + I LR++V+ ++ CY L +VH++W
Sbjct: 379 KETYSIYKAALKSKGSINDYNQIAQQLRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEIW 438
Query: 252 AEVPGKMKDYITRPKFNGYQSLHTVVTG---EGLVPLEVQIRTKEMHLQAEFGFAAHWRY 308
+P +KDYI PK NGYQSLHT V E + LEVQIRT+EM L AE G A ++
Sbjct: 439 KPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAVYYNG 498
Query: 309 K 309
K
Sbjct: 499 K 499
Score = 46 (21.3 bits), Expect = 8.2e-35, Sum P(2) = 8.2e-35
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 461 EEIQRMYERGLAVSNTGPAV-TSMVGS 486
EE+ + ERG+AV G ++ T +VG+
Sbjct: 482 EEMDLIAERGIAVYYNGKSLSTGLVGN 508
>UNIPROTKB|Q4K899 [details] [associations]
symbol:relA "GTP diphosphokinase" species:220664
"Pseudomonas protegens Pf-5" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015969 "guanosine tetraphosphate
metabolic process" evidence=ISS] [GO:0034198 "cellular response to
amino acid starvation" evidence=ISS] InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00954 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0000166
GO:GO:0016301 EMBL:CP000076 GenomeReviews:CP000076_GR
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0034198 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
OMA:HRADCDQ GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691
RefSeq:YP_261534.1 ProteinModelPortal:Q4K899 STRING:Q4K899
GeneID:3478565 KEGG:pfl:PFL_4446 PATRIC:19878324
ProtClustDB:CLSK866228 BioCyc:PFLU220664:GIX8-4481-MONOMER
Uniprot:Q4K899
Length = 747
Score = 517 (187.1 bits), Expect = 1.7e-49, P = 1.7e-49
Identities = 120/330 (36%), Positives = 188/330 (56%)
Query: 13 VETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLS-K 71
+E A +LA + + + A +L+ + + + + + FG V L++GV +++ ++
Sbjct: 69 LEIAEILADLKLDQDSLVAAVLYRGVREGQIQLPAVSQRFGPVVTKLIDGVLRMAAITAS 128
Query: 72 LA-RENNTASKTVEADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPLCKRQRFAKE 129
L+ R++ + + L M +AM D R LIKLA+R + + + KR R A+E
Sbjct: 129 LSPRQSLVLGTQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKSADEEKRNRVARE 188
Query: 130 TLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC-FD-EAMVTSAIEKLE 187
+I+ PLA+RLGI K +LE+L F++L P+Q+ +++ L E D E ++ + +L+
Sbjct: 189 VFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIAKLLHERRLDRERFISDVMNQLQ 248
Query: 188 QALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVV 247
LK ++ + GR K +YSI KM +K L +I+D+ +R++V DCY AL +V
Sbjct: 249 NELKATGVN-ADISGRAKHIYSIWRKMQRKGLEFSQIYDVRAVRVLVPEMRDCYTALGIV 307
Query: 248 HQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAAHW 306
H LW +P + DYI PK NGY+SLHT V G EG V LEVQIRT MH +AE G AHW
Sbjct: 308 HTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKV-LEVQIRTHAMHEEAELGVCAHW 366
Query: 307 RYKEGDCQH-SSFVLQMVEWARWVLTWQCE 335
+YK D + S+ + + W R VL W E
Sbjct: 367 KYKGTDVKSGSNHYEEKISWLRQVLEWHEE 396
>TIGR_CMR|CPS_4115 [details] [associations]
symbol:CPS_4115 "GTP pyrophosphokinase" species:167879
"Colwellia psychrerythraea 34H" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0000166 GO:GO:0016301 EMBL:CP000083
GenomeReviews:CP000083_GR Gene3D:3.10.20.30 InterPro:IPR012675
eggNOG:COG0317 InterPro:IPR026020 PANTHER:PTHR21262
HOGENOM:HOG000018300 KO:K00951 OMA:HRADCDQ GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_270770.1
ProteinModelPortal:Q47WQ2 STRING:Q47WQ2 DNASU:3518529
GeneID:3518529 KEGG:cps:CPS_4115 PATRIC:21471093
BioCyc:CPSY167879:GI48-4128-MONOMER Uniprot:Q47WQ2
Length = 737
Score = 498 (180.4 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 118/332 (35%), Positives = 180/332 (54%)
Query: 9 LLH-CVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLS 67
LLH +E +L+ + ++ + A + L + + +++ F + L +GV +++
Sbjct: 53 LLHKSMEMVEILSGLNLDADSLVAAFISPLLANDIIEIEFVKEHFSKDILMLCQGVEQMA 112
Query: 68 QLSKLARENNTASKTV--EADRLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPLCKRQ 124
+ L ++++ +S D + M LAM D RAV+IKLA+RL ++ R
Sbjct: 113 AIKALRQQSSQSSDQAPQNIDNIRRMLLAMVDDVRAVVIKLAERLCDLREKKNSDEETRV 172
Query: 125 RFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAMVTSA 182
AKE+ I+ PLANRLGI K +LE++ F++L+P + +++ L E E + S
Sbjct: 173 LVAKESANIYAPLANRLGIGQLKWELEDISFRYLHPQVYKKIAKLLDETRLEREQYMASF 232
Query: 183 IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQ 242
+ L L I V GR K ++SI KM +K L D++ D+ +R++VE +DCY
Sbjct: 233 VGHLNSELNALAIKGEVY-GRPKHIFSIWKKMQQKSLDFDQLFDVRAVRVVVEKVQDCYS 291
Query: 243 ALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGF 302
AL +VH W + + DY+ PK NGYQS+HTVV G +EVQIRTK+M AE G
Sbjct: 292 ALGIVHTEWQHIAKEFSDYVATPKANGYQSIHTVVLGPEGKSVEVQIRTKQMDDDAELGV 351
Query: 303 AAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQ 333
AAHWRYKEG+ S V W R +L WQ
Sbjct: 352 AAHWRYKEGNASGKSNSFDDKVGWLRKILQWQ 383
>TAIR|locus:2090487 [details] [associations]
symbol:CRSH "Ca2+-activated RelA/spot homolog"
species:3702 "Arabidopsis thaliana" [GO:0005509 "calcium ion
binding" evidence=IEA;ISS] [GO:0015969 "guanosine tetraphosphate
metabolic process" evidence=IEA] [GO:0008728 "GTP diphosphokinase
activity" evidence=IGI] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR002048 InterPro:IPR007685 InterPro:IPR011992
Pfam:PF04607 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054
SMART:SM00954 Prosite:PS00018 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 HSSP:P09860 eggNOG:COG0317 InterPro:IPR026020
PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969 EMBL:BT006180
EMBL:AK228656 IPI:IPI00528710 RefSeq:NP_188374.2 UniGene:At.38719
ProteinModelPortal:Q84R11 SMR:Q84R11 PaxDb:Q84R11 PRIDE:Q84R11
EnsemblPlants:AT3G17470.1 GeneID:821012 KEGG:ath:AT3G17470
TAIR:At3g17470 HOGENOM:HOG000241233 InParanoid:Q84R11 OMA:RYKSRYS
PhylomeDB:Q84R11 ProtClustDB:CLSN2679918 ArrayExpress:Q84R11
Genevestigator:Q84R11 Uniprot:Q84R11
Length = 583
Score = 228 (85.3 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 57/147 (38%), Positives = 86/147 (58%)
Query: 184 EKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI----- 233
E+L ++LKD + ++ + + GR+KS YS+ K+L+ +E++D+ GLR+I
Sbjct: 286 EQLHRSLKDDLVLAEMVNDVYIKGRYKSRYSMMKKLLRDGRKPEEVNDVLGLRVILMPNS 345
Query: 234 ----VE-NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT---GEGLVPL 285
VE E+ CY+ ++ LW E+P + KDYI RPK NGY+SLH V + + PL
Sbjct: 346 VVNDVEVGEKACYRTSEIIRSLWKEIPHRTKDYIARPKENGYRSLHMAVDVSDSDQIRPL 405
Query: 286 -EVQIRTKEMHLQAEFGFAAHWRYKEG 311
E+QIRT +M A G A+H YK G
Sbjct: 406 MEIQIRTMDMDGSANAGTASHSLYKGG 432
Score = 222 (83.2 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 65/243 (26%), Positives = 130/243 (53%)
Query: 1 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 60
+ + G L + +++LA + ++ V++A +L + +D +S + G G A L+
Sbjct: 105 LASDGRSPLSKALSLSIILADLQMDAEVISASILSEVVDANAISIYEVRDHIGTGTAHLL 164
Query: 61 EGVSKLSQLS-KL-ARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDAL 118
+ ++ + K+ ++ TA+ L +L D RAV++ L +L M LD L
Sbjct: 165 HEIFRVKNIPFKVDVLDDETAAS------LRKFYLTYYDIRAVIMDLVSKLDEMRHLDHL 218
Query: 119 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFDE 176
P ++Q + E L+I+ PLA+ +G + ++LE++ F++L P + L S L E +
Sbjct: 219 PRYRQQILSLEVLKIYSPLAHAVGANHLSLELEDISFRYLFPCSYIYLDSWLRGHENGSK 278
Query: 177 AMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 231
++ E+L ++LKD + ++ + + GR+KS YS+ K+L+ +E++D+ GLR
Sbjct: 279 PLIDVYKEQLHRSLKDDLVLAEMVNDVYIKGRYKSRYSMMKKLLRDGRKPEEVNDVLGLR 338
Query: 232 LIV 234
+I+
Sbjct: 339 VIL 341
>ZFIN|ZDB-GENE-050417-377 [details] [associations]
symbol:hddc3 "HD domain containing 3" species:7955
"Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR003607
SMART:SM00471 ZFIN:ZDB-GENE-050417-377 GO:GO:0046872 GO:GO:0008152
EMBL:BC092780 IPI:IPI00499964 RefSeq:NP_001017835.1
UniGene:Dr.85187 HSSP:Q54089 ProteinModelPortal:Q568P1
GeneID:550533 KEGG:dre:550533 CTD:374659 eggNOG:COG0317
HOVERGEN:HBG081594 InParanoid:Q568P1 KO:K01139 OrthoDB:EOG49PB0R
NextBio:20879774 GO:GO:0008893 InterPro:IPR026020 PANTHER:PTHR21262
Uniprot:Q568P1
Length = 180
Score = 133 (51.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 39/114 (34%), Positives = 62/114 (54%)
Query: 5 GDPYLLHCVETAMLLAAIG--ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 62
G PY+ H + A +L+ G + V+ A LLHDT++D +++ + FGA VA +V+G
Sbjct: 30 GTPYINHPIGVARILSHEGEITDVEVIQAALLHDTVEDTDTTFEELESVFGATVARIVQG 89
Query: 63 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLD 116
V+ L K RE + VE H + +A L+KLAD+L+N+ L+
Sbjct: 90 VTDDKSLPKAERER----QQVE----HAPHCSH---QAKLVKLADKLYNLRDLN 132
>UNIPROTKB|Q8N4P3 [details] [associations]
symbol:HDDC3 "Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1" species:9606 "Homo sapiens"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IEA] InterPro:IPR003607 SMART:SM00471 GO:GO:0046872
GO:GO:0008152 EMBL:AC068831 CTD:374659 HOVERGEN:HBG081594 KO:K01139
OrthoDB:EOG49PB0R GO:GO:0008893 InterPro:IPR026020
PANTHER:PTHR21262 OMA:PEGWSEH EMBL:BC033794 IPI:IPI00394782
IPI:IPI00789618 RefSeq:NP_940929.1 UniGene:Hs.349979 PDB:3NR1
PDBsum:3NR1 ProteinModelPortal:Q8N4P3 SMR:Q8N4P3 IntAct:Q8N4P3
MINT:MINT-1475376 PhosphoSite:Q8N4P3 DMDM:122065202 PaxDb:Q8N4P3
PRIDE:Q8N4P3 DNASU:374659 Ensembl:ENST00000330334
Ensembl:ENST00000394272 GeneID:374659 KEGG:hsa:374659
UCSC:uc002bqe.4 GeneCards:GC15M091474 H-InvDB:HIX0012581
HGNC:HGNC:30522 HPA:HPA040895 neXtProt:NX_Q8N4P3
PharmGKB:PA142671696 eggNOG:NOG113345 InParanoid:Q8N4P3
EvolutionaryTrace:Q8N4P3 GenomeRNAi:374659 NextBio:100241
Bgee:Q8N4P3 CleanEx:HS_HDDC3 Genevestigator:Q8N4P3
GermOnline:ENSG00000184508 Uniprot:Q8N4P3
Length = 179
Score = 127 (49.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/158 (31%), Positives = 74/158 (46%)
Query: 5 GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 62
G PY+ H + A +L G VV A LLHDT++D + D + FGA V LVE
Sbjct: 29 GTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGAQVRRLVEE 88
Query: 63 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCK 122
V+ L KL R+ RL + A L+KLAD+L+N+ L+ C
Sbjct: 89 VTDDKTLPKLERK-----------RLQVEQAPHSSPGAKLVKLADKLYNLRDLNR---CT 134
Query: 123 RQRFAKETLEIFVPLANRL--GISTWKVQLENLCFKHL 158
+ +++ ++ + A ++ G+ QLE KHL
Sbjct: 135 PEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEE-ALKHL 171
>UNIPROTKB|Q722A6 [details] [associations]
symbol:LMOf2365_0828 "HD domain protein" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003607 SMART:SM00471 GO:GO:0003824
GO:GO:0008152 EMBL:AE017262 GenomeReviews:AE017262_GR
eggNOG:COG0317 InterPro:IPR026020 PANTHER:PTHR21262
HOGENOM:HOG000265510 RefSeq:YP_013431.1 ProteinModelPortal:Q722A6
STRING:Q722A6 GeneID:2797284 KEGG:lmf:LMOf2365_0828 PATRIC:20322872
OMA:WYNEGIK ProtClustDB:CLSK564112 Uniprot:Q722A6
Length = 180
Score = 127 (49.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 2 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 61
+ +G+PY H + A +L G VV AGLLHD ++D ++ I FGA VADLV
Sbjct: 19 KITGEPYFSHPLNVARILRRAGFREEVVVAGLLHDAVEDTEMTDADIRAAFGAEVADLVA 78
Query: 62 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD 97
++ LS R+ +T + V L L +AD
Sbjct: 79 SHTENKTLSWEERKAHTIEQ-VRTGNLEEKALIVAD 113
>UNIPROTKB|H0YNP9 [details] [associations]
symbol:HDDC3 "Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1" species:9606 "Homo sapiens"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR003607
SMART:SM00471 GO:GO:0003824 GO:GO:0008152 EMBL:AC068831
InterPro:IPR026020 PANTHER:PTHR21262 HGNC:HGNC:30522
ProteinModelPortal:H0YNP9 SMR:H0YNP9 PRIDE:H0YNP9
Ensembl:ENST00000559898 Bgee:H0YNP9 Uniprot:H0YNP9
Length = 143
Score = 118 (46.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/114 (35%), Positives = 55/114 (48%)
Query: 5 GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 62
G PY+ H + A +L G VV A LLHDT++D + D + FGA V LVE
Sbjct: 29 GTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGAQVRRLVEE 88
Query: 63 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLD 116
V+ L KL R+ RL + A L+KLAD+L+N+ L+
Sbjct: 89 VTDDKTLPKLERK-----------RLQVEQAPHSSPGAKLVKLADKLYNLRDLN 131
>UNIPROTKB|Q722B6 [details] [associations]
symbol:LMOf2365_0818 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007685 Pfam:PF04607 SMART:SM00954
EMBL:AE017262 GenomeReviews:AE017262_GR InterPro:IPR026020
PANTHER:PTHR21262 GO:GO:0015969 eggNOG:COG2357 HOGENOM:HOG000263234
RefSeq:YP_013421.1 ProteinModelPortal:Q722B6 STRING:Q722B6
GeneID:2797304 KEGG:lmf:LMOf2365_0818 PATRIC:20322852 OMA:DYSPIEH
ProtClustDB:CLSK888112 Uniprot:Q722B6
Length = 212
Score = 130 (50.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 41/128 (32%), Positives = 67/128 (52%)
Query: 200 LCGRHKSLYSIHCKMLKKKL------TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWA- 252
L R KSL SI K+ KKK+ + +HDI G+R+ D ++ +H++ A
Sbjct: 49 LKSRVKSLESIGAKLEKKKVDITPENALKYVHDIAGIRITCSFVSDIFR----IHEMLAG 104
Query: 253 --EVPGK-MKDYITRPKFNGYQSLHTV------VTGEG-LVPLEVQIRTKEMHLQAEFGF 302
++ K +KDY+T PK NGY+SLH + +T + +E+QIRT M A
Sbjct: 105 QSDITIKRVKDYVTNPKPNGYRSLHLLCEVPVFLTNRSEKMTVEIQIRTVAMDFWASLEH 164
Query: 303 AAHWRYKE 310
+++Y++
Sbjct: 165 KIYYKYQQ 172
>RGD|1311839 [details] [associations]
symbol:Hddc3 "HD domain containing 3" species:10116 "Rattus
norvegicus" [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003607 InterPro:IPR006674 SMART:SM00471 RGD:1311839
GO:GO:0046872 EMBL:CH473980 GO:GO:0008152 GO:GO:0008081
Gene3D:1.10.3210.10 CTD:374659 KO:K01139 OrthoDB:EOG49PB0R
InterPro:IPR026020 PANTHER:PTHR21262 GeneTree:ENSGT00390000011608
IPI:IPI00189404 RefSeq:NP_001100998.1 UniGene:Rn.17508
Ensembl:ENSRNOT00000016445 GeneID:308758 KEGG:rno:308758
UCSC:RGD:1311839 OMA:VAGCRGT NextBio:659470 Uniprot:D4A500
Length = 179
Score = 124 (48.7 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 46/151 (30%), Positives = 71/151 (47%)
Query: 5 GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 62
G PY+ H + A +L G VV A LLHDT++D + D + FGA V LVE
Sbjct: 29 GTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGAQVRRLVEE 88
Query: 63 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCK 122
V+ L KL R+ + H+ A L+KLAD+LHN+ L+ C
Sbjct: 89 VTDDKTLPKLERKRQQVEQAP-----HS------SPGAKLVKLADKLHNLRDLNR---CT 134
Query: 123 RQRFAKETLEIFVPLANRL--GISTWKVQLE 151
+ +++ ++ + A ++ G+ QLE
Sbjct: 135 PKGWSEHRVQEYFEWAAQVVKGLQGTNQQLE 165
>MGI|MGI:1915945 [details] [associations]
symbol:Hddc3 "HD domain containing 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003607 SMART:SM00471 MGI:MGI:1915945 GO:GO:0046872
GO:GO:0008152 HSSP:Q54089 CTD:374659 HOVERGEN:HBG081594 KO:K01139
OrthoDB:EOG49PB0R GO:GO:0008893 InterPro:IPR026020
PANTHER:PTHR21262 GeneTree:ENSGT00390000011608 OMA:PEGWSEH
eggNOG:NOG113345 EMBL:AK004078 EMBL:BC038310 IPI:IPI00132959
RefSeq:NP_081088.1 UniGene:Mm.21171 ProteinModelPortal:Q9D114
SMR:Q9D114 STRING:Q9D114 PhosphoSite:Q9D114 PaxDb:Q9D114
PRIDE:Q9D114 Ensembl:ENSMUST00000032747 GeneID:68695 KEGG:mmu:68695
UCSC:uc009ian.1 InParanoid:Q9D114 NextBio:327714 Bgee:Q9D114
CleanEx:MM_HDDC3 Genevestigator:Q9D114
GermOnline:ENSMUSG00000030532 Uniprot:Q9D114
Length = 179
Score = 117 (46.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 39/114 (34%), Positives = 55/114 (48%)
Query: 5 GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 62
G PY+ H + A +L G VV A LLHDT++D + D + FGA V LVE
Sbjct: 29 GTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGAQVRRLVEE 88
Query: 63 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLD 116
V+ L KL R+ + H+ A L+KLAD+L+N+ L+
Sbjct: 89 VTDDKTLPKLERKRQQVEQAP-----HS------SPGAKLVKLADKLYNLRDLN 131
>UNIPROTKB|F1MR07 [details] [associations]
symbol:HDDC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA]
InterPro:IPR003607 InterPro:IPR006674 SMART:SM00471 GO:GO:0046872
GO:GO:0008152 GO:GO:0008081 Gene3D:1.10.3210.10 CTD:374659
KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GeneTree:ENSGT00390000011608 OMA:PEGWSEH EMBL:DAAA02052163
IPI:IPI00690680 RefSeq:NP_001179885.1 UniGene:Bt.62503
Ensembl:ENSBTAT00000024795 GeneID:613382 KEGG:bta:613382
NextBio:20898547 Uniprot:F1MR07
Length = 179
Score = 116 (45.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 39/114 (34%), Positives = 54/114 (47%)
Query: 5 GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 62
G PY+ H + A +L G VV A LLHDT++D + D + FG V LVE
Sbjct: 29 GTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGDQVRRLVEE 88
Query: 63 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLD 116
V+ L KL R+ RL + A L+KLAD+L+N+ L+
Sbjct: 89 VTDDKTLPKLERK-----------RLQVEHAPQSSPGAKLVKLADKLYNLRDLN 131
>UNIPROTKB|Q721J9 [details] [associations]
symbol:LMOf2365_0987 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007685 Pfam:PF04607 SMART:SM00954
EMBL:AE017262 GenomeReviews:AE017262_GR GO:GO:0015969
eggNOG:COG2357 RefSeq:YP_013588.1 ProteinModelPortal:Q721J9
SMR:Q721J9 STRING:Q721J9 GeneID:2797935 KEGG:lmf:LMOf2365_0987
PATRIC:20323200 HOGENOM:HOG000263233 KO:K07816 OMA:RSYHVIV
ProtClustDB:CLSK564193 Uniprot:Q721J9
Length = 222
Score = 120 (47.3 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 202 GRHKSLYSIHCKMLKKKLTMD----EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 257
GR K + SI K +K + +D E+ DI GLR++ + +D +R++ Q +
Sbjct: 43 GRVKPVASILDKANQKHIALDHLVEEMQDIAGLRMMCQFVDDIEVVVRLLRQRNDFRIVE 102
Query: 258 MKDYITRPKFNGYQSLHTVVT-------GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYK 309
+DYIT K +GY+S H V+ GE + E+QIRT M+ A + +++Y+
Sbjct: 103 ERDYITNKKPSGYRSYHVVIEYPVETIQGEKKILAEIQIRTLAMNFWATIEHSVNYKYQ 161
>FB|FBgn0039650 [details] [associations]
symbol:Mesh1 "Metazoan SpoT homolog-1" species:7227
"Drosophila melanogaster" [GO:0008081 "phosphoric diester hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0042594 "response to starvation" evidence=IMP]
[GO:0015971 "guanosine tetraphosphate catabolic process"
evidence=IDA] [GO:0008893 "guanosine-3',5'-bis(diphosphate)
3'-diphosphatase activity" evidence=IDA] InterPro:IPR003607
InterPro:IPR006674 Pfam:PF01966 SMART:SM00471 EMBL:AE014297
GO:GO:0046872 GO:GO:0042594 GO:GO:0008081 eggNOG:COG0317 KO:K01139
GO:GO:0008893 InterPro:IPR026020 PANTHER:PTHR21262 EMBL:BT024375
RefSeq:NP_651682.1 UniGene:Dm.24112 PDB:3NQW PDBsum:3NQW
ProteinModelPortal:Q9VAM9 SMR:Q9VAM9 PaxDb:Q9VAM9 PRIDE:Q9VAM9
EnsemblMetazoa:FBtr0085407 GeneID:43456 KEGG:dme:Dmel_CG11900
UCSC:CG11900-RA CTD:43456 FlyBase:FBgn0039650
GeneTree:ENSGT00390000011608 InParanoid:Q9VAM9 OMA:PEGWSEH
OrthoDB:EOG4GMSDF PhylomeDB:Q9VAM9 GenomeRNAi:43456 NextBio:834034
Bgee:Q9VAM9 GO:GO:0015971 Uniprot:Q9VAM9
Length = 179
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 36/111 (32%), Positives = 54/111 (48%)
Query: 7 PYLLHCVETAMLLA--AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 64
PY+ H + + +L+ A + V+ A LLHD ++D S++ + + FG V LV V+
Sbjct: 32 PYVNHVINVSTILSVEACITDEGVLMAALLHDVVEDTDASFEDVEKLFGPDVCGLVREVT 91
Query: 65 KLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTL 115
L K R+ RL A + RA LIKLAD+L N+ L
Sbjct: 92 DDKSLEKQERK-----------RLQIENAAKSSCRAKLIKLADKLDNLRDL 131
>UNIPROTKB|E2QTM0 [details] [associations]
symbol:HDDC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR003607 SMART:SM00471 GO:GO:0003824 GO:GO:0008152
CTD:374659 KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GeneTree:ENSGT00390000011608 OMA:PEGWSEH EMBL:AAEX03002330
RefSeq:XP_545862.1 Ensembl:ENSCAFT00000019442 GeneID:488744
KEGG:cfa:488744 NextBio:20862046 Uniprot:E2QTM0
Length = 179
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 39/114 (34%), Positives = 54/114 (47%)
Query: 5 GDPYLLHCVETAMLLA-AIGANSTVVA-AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 62
G PY+ H + A +L G VV A LLHDT++D + D + FG V LVE
Sbjct: 29 GTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGTQVRRLVEE 88
Query: 63 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLD 116
V+ L KL R+ RL + A L+KLAD+L+N+ L+
Sbjct: 89 VTDDKTLPKLERK-----------RLQVEQAPHSSPAAKLVKLADKLYNLRDLN 131
>UNIPROTKB|F1RMH8 [details] [associations]
symbol:HDDC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR003607 SMART:SM00471 GO:GO:0003824 GO:GO:0008152
CTD:374659 KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GeneTree:ENSGT00390000011608 OMA:PEGWSEH EMBL:CT868688
RefSeq:NP_001230338.1 UniGene:Ssc.47907 Ensembl:ENSSSCT00000002039
GeneID:100153189 KEGG:ssc:100153189 Uniprot:F1RMH8
Length = 179
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 5 GDPYLLHCVETAMLLAA-IGANSTVVA-AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 62
G PY+ H + A +L G VV A LLHDT++D + D + FG V LVE
Sbjct: 29 GTPYINHPIGVARILTREAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGVQVRRLVEE 88
Query: 63 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCK 122
V+ L KL R K ++ ++ + A L+KLAD+L+N+ L+ C
Sbjct: 89 VTDDKTLPKLER------KQLQVEQA-----PHSSPGAKLVKLADKLYNLRDLNR---CT 134
Query: 123 RQRFAKETLEIFVPLANRL--GISTWKVQLE 151
+ +++ ++ + A ++ G+ QLE
Sbjct: 135 PEGWSERRVQEYFEWAAQVVKGLQGTNQQLE 165
>UNIPROTKB|Q81LP1 [details] [associations]
symbol:BAS4242 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0015969 HOGENOM:HOG000263234
OMA:DYSPIEH RefSeq:NP_846794.1 RefSeq:YP_021217.1
RefSeq:YP_030490.1 ProteinModelPortal:Q81LP1 DNASU:1088595
EnsemblBacteria:EBBACT00000008819 EnsemblBacteria:EBBACT00000015923
EnsemblBacteria:EBBACT00000023081 GeneID:1088595 GeneID:2817609
GeneID:2852961 KEGG:ban:BA_4572 KEGG:bar:GBAA_4572 KEGG:bat:BAS4242
ProtClustDB:CLSK917361 BioCyc:BANT260799:GJAJ-4298-MONOMER
BioCyc:BANT261594:GJ7F-4446-MONOMER Uniprot:Q81LP1
Length = 216
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 44/137 (32%), Positives = 66/137 (48%)
Query: 188 QALKDKNISFLVLCGRHKSLYSIHCKMLKKKL--TMDE----IHDIYGLRLIVENEEDCY 241
Q L+D N F + R K SI K+ +K L T++ + DI G+R+ ED Y
Sbjct: 37 QFLEDYN-PFEHIKTRLKQPESIIKKLERKNLLPTVENAQTHLQDIIGIRITCCFVEDIY 95
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV-------TGEGLVPLEVQIRTKEM 294
V+ + ++KDYI PK NGY+SLH ++ +G V E+Q+RT M
Sbjct: 96 HLKNVIQKREDMEIIEVKDYIANPKKNGYKSLHMIIKYPLSLNSGTKEVFAEIQLRTLAM 155
Query: 295 HLQAEFGFAAHWRYKEG 311
A +++Y EG
Sbjct: 156 DFWASLEHKLYYKY-EG 171
>TIGR_CMR|BA_4572 [details] [associations]
symbol:BA_4572 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR007685 Pfam:PF04607 SMART:SM00954 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0015969
HOGENOM:HOG000263234 OMA:DYSPIEH RefSeq:NP_846794.1
RefSeq:YP_021217.1 RefSeq:YP_030490.1 ProteinModelPortal:Q81LP1
DNASU:1088595 EnsemblBacteria:EBBACT00000008819
EnsemblBacteria:EBBACT00000015923 EnsemblBacteria:EBBACT00000023081
GeneID:1088595 GeneID:2817609 GeneID:2852961 KEGG:ban:BA_4572
KEGG:bar:GBAA_4572 KEGG:bat:BAS4242 ProtClustDB:CLSK917361
BioCyc:BANT260799:GJAJ-4298-MONOMER
BioCyc:BANT261594:GJ7F-4446-MONOMER Uniprot:Q81LP1
Length = 216
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 44/137 (32%), Positives = 66/137 (48%)
Query: 188 QALKDKNISFLVLCGRHKSLYSIHCKMLKKKL--TMDE----IHDIYGLRLIVENEEDCY 241
Q L+D N F + R K SI K+ +K L T++ + DI G+R+ ED Y
Sbjct: 37 QFLEDYN-PFEHIKTRLKQPESIIKKLERKNLLPTVENAQTHLQDIIGIRITCCFVEDIY 95
Query: 242 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV-------TGEGLVPLEVQIRTKEM 294
V+ + ++KDYI PK NGY+SLH ++ +G V E+Q+RT M
Sbjct: 96 HLKNVIQKREDMEIIEVKDYIANPKKNGYKSLHMIIKYPLSLNSGTKEVFAEIQLRTLAM 155
Query: 295 HLQAEFGFAAHWRYKEG 311
A +++Y EG
Sbjct: 156 DFWASLEHKLYYKY-EG 171
>UNIPROTKB|Q81TQ4 [details] [associations]
symbol:BAS1119 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0015969 HOGENOM:HOG000263233
KO:K07816 OMA:RSYHVIV RefSeq:NP_843687.1 RefSeq:YP_017823.1
RefSeq:YP_027391.1 ProteinModelPortal:Q81TQ4 SMR:Q81TQ4
DNASU:1083632 EnsemblBacteria:EBBACT00000011764
EnsemblBacteria:EBBACT00000014597 EnsemblBacteria:EBBACT00000021269
GeneID:1083632 GeneID:2817020 GeneID:2848611 KEGG:ban:BA_1212
KEGG:bar:GBAA_1212 KEGG:bat:BAS1119 ProtClustDB:CLSK916132
BioCyc:BANT260799:GJAJ-1195-MONOMER
BioCyc:BANT261594:GJ7F-1251-MONOMER Uniprot:Q81TQ4
Length = 212
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 34/118 (28%), Positives = 63/118 (53%)
Query: 202 GRHKSLYSIHCKMLKKKLTMD----EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 257
GR KS+ SI K K+ + +D ++ DI GLR++ + ++ + + + +
Sbjct: 44 GRVKSVASIIDKAEKRNVPLDRLREDMQDIAGLRMMCQFVDEIKPVVEYLRKRNDFEIVE 103
Query: 258 MKDYITRPKFNGYQSLHTVVT-------GEGLVPLEVQIRTKEMHLQAEFGFAAHWRY 308
+DY+T+ K +GY+S H V++ GE V +E+QIRT M+ A + +++Y
Sbjct: 104 ERDYVTQKKDSGYRSYHVVISYPVQTIQGEQKVLVEIQIRTLAMNFWATIEHSLNYKY 161
>TIGR_CMR|BA_1212 [details] [associations]
symbol:BA_1212 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR007685 Pfam:PF04607 SMART:SM00954 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0015969
HOGENOM:HOG000263233 KO:K07816 OMA:RSYHVIV RefSeq:NP_843687.1
RefSeq:YP_017823.1 RefSeq:YP_027391.1 ProteinModelPortal:Q81TQ4
SMR:Q81TQ4 DNASU:1083632 EnsemblBacteria:EBBACT00000011764
EnsemblBacteria:EBBACT00000014597 EnsemblBacteria:EBBACT00000021269
GeneID:1083632 GeneID:2817020 GeneID:2848611 KEGG:ban:BA_1212
KEGG:bar:GBAA_1212 KEGG:bat:BAS1119 ProtClustDB:CLSK916132
BioCyc:BANT260799:GJAJ-1195-MONOMER
BioCyc:BANT261594:GJ7F-1251-MONOMER Uniprot:Q81TQ4
Length = 212
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 34/118 (28%), Positives = 63/118 (53%)
Query: 202 GRHKSLYSIHCKMLKKKLTMD----EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 257
GR KS+ SI K K+ + +D ++ DI GLR++ + ++ + + + +
Sbjct: 44 GRVKSVASIIDKAEKRNVPLDRLREDMQDIAGLRMMCQFVDEIKPVVEYLRKRNDFEIVE 103
Query: 258 MKDYITRPKFNGYQSLHTVVT-------GEGLVPLEVQIRTKEMHLQAEFGFAAHWRY 308
+DY+T+ K +GY+S H V++ GE V +E+QIRT M+ A + +++Y
Sbjct: 104 ERDYVTQKKDSGYRSYHVVISYPVQTIQGEQKVLVEIQIRTLAMNFWATIEHSLNYKY 161
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 488 488 0.00081 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 41
No. of states in DFA: 623 (66 KB)
Total size of DFA: 315 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.28u 0.09s 39.37t Elapsed: 00:00:02
Total cpu time: 39.29u 0.09s 39.38t Elapsed: 00:00:02
Start: Fri May 10 03:57:23 2013 End: Fri May 10 03:57:25 2013